Query 015006
Match_columns 414
No_of_seqs 440 out of 3950
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 05:00:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015006.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015006hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 1.8E-48 6.2E-53 394.7 37.0 323 2-339 93-420 (457)
2 2if4_A ATFKBP42; FKBP-like, al 100.0 6.6E-42 2.3E-46 333.2 23.1 273 55-339 49-333 (338)
3 1p5q_A FKBP52, FK506-binding p 100.0 5E-38 1.7E-42 305.6 33.2 277 47-337 17-297 (336)
4 3jxv_A 70 kDa peptidyl-prolyl 100.0 5.6E-32 1.9E-36 264.3 19.8 163 2-170 185-355 (356)
5 1kt0_A FKBP51, 51 kDa FK506-bi 100.0 7.6E-31 2.6E-35 265.4 14.6 279 48-335 22-381 (457)
6 3jxv_A 70 kDa peptidyl-prolyl 100.0 8.8E-31 3E-35 255.9 13.2 159 1-170 72-236 (356)
7 1q1c_A FK506-binding protein 4 100.0 8.8E-30 3E-34 239.8 17.2 160 2-175 113-279 (280)
8 3o5e_A Peptidyl-prolyl CIS-tra 99.9 2.5E-23 8.6E-28 176.6 13.3 116 47-169 25-142 (144)
9 2lkn_A AH receptor-interacting 99.9 9.4E-24 3.2E-28 181.3 9.7 119 53-175 8-163 (165)
10 2f4e_A ATFKBP42; FKBP-like, al 99.9 7.4E-23 2.5E-27 179.9 14.0 125 55-186 49-179 (180)
11 3o5q_A Peptidyl-prolyl CIS-tra 99.9 1.6E-22 5.6E-27 168.2 12.9 115 48-169 10-126 (128)
12 3b7x_A FK506-binding protein 6 99.9 7.3E-23 2.5E-27 171.6 9.9 116 47-169 18-133 (134)
13 3rkv_A Putative peptidylprolyl 99.9 2.5E-22 8.4E-27 173.1 13.2 154 179-333 4-161 (162)
14 2vn1_A 70 kDa peptidylprolyl i 99.9 9.4E-22 3.2E-26 164.0 15.0 116 49-170 10-127 (129)
15 1r9h_A FKB-6, FK506 binding pr 99.9 5.7E-22 1.9E-26 166.4 12.7 117 48-171 5-123 (135)
16 2awg_A 38 kDa FK-506 binding p 99.9 1.8E-21 6.3E-26 159.6 13.9 113 47-169 5-117 (118)
17 3kz7_A FK506-binding protein 3 99.9 2.3E-21 8E-26 159.3 13.5 109 55-169 4-119 (119)
18 2jwx_A FKBP38NTD, FK506-bindin 99.9 2.6E-21 8.8E-26 165.7 13.3 115 48-172 36-151 (157)
19 2d9f_A FK506-binding protein 8 99.9 1.2E-21 4E-26 164.5 10.9 123 47-179 9-132 (135)
20 1yat_A FK506 binding protein; 99.9 7.1E-21 2.4E-25 154.9 13.8 107 55-168 6-112 (113)
21 2ppn_A FK506-binding protein 1 99.9 5E-21 1.7E-25 154.3 12.2 107 56-169 1-107 (107)
22 2y78_A Peptidyl-prolyl CIS-tra 99.8 1.5E-20 5.2E-25 157.0 13.8 108 53-168 26-133 (133)
23 4dip_A Peptidyl-prolyl CIS-tra 99.8 1.4E-20 4.7E-25 156.0 12.4 117 49-170 6-123 (125)
24 1jvw_A Macrophage infectivity 99.8 1.5E-20 5.2E-25 162.7 13.1 121 53-184 35-155 (167)
25 3uf8_A Ubiquitin-like protein 99.8 5.3E-20 1.8E-24 165.5 15.8 112 49-168 98-209 (209)
26 2lgo_A FKBP; infectious diseas 99.8 4E-20 1.4E-24 154.0 13.8 103 59-168 28-130 (130)
27 4gco_A Protein STI-1; structur 99.8 7.3E-20 2.5E-24 151.7 15.2 113 185-313 12-124 (126)
28 2hr2_A Hypothetical protein; a 99.8 2.3E-20 7.8E-25 159.7 9.8 140 179-323 4-155 (159)
29 1q1c_A FK506-binding protein 4 99.8 1.5E-19 5.1E-24 170.0 14.8 120 43-170 38-159 (280)
30 3oe2_A Peptidyl-prolyl CIS-tra 99.8 8.7E-20 3E-24 163.8 12.4 104 53-169 115-218 (219)
31 1fd9_A Protein (macrophage inf 99.8 2.1E-19 7.3E-24 161.4 12.0 108 53-170 104-211 (213)
32 2fbn_A 70 kDa peptidylprolyl i 99.8 1.6E-18 5.5E-23 154.1 17.2 171 161-336 13-188 (198)
33 1u79_A FKBP-type peptidyl-prol 99.8 2E-19 7E-24 149.7 9.5 107 54-168 11-128 (129)
34 1q6h_A FKBP-type peptidyl-prol 99.8 9.7E-19 3.3E-23 158.1 13.3 104 54-168 120-223 (224)
35 2pbc_A FK506-binding protein 2 99.8 6.3E-19 2.1E-23 140.6 10.4 94 74-171 6-99 (102)
36 1ihg_A Cyclophilin 40; ppiase 99.7 9.6E-18 3.3E-22 164.7 14.8 156 177-333 214-370 (370)
37 4gcn_A Protein STI-1; structur 99.7 1.4E-17 4.9E-22 137.8 12.7 115 182-313 4-125 (127)
38 3upv_A Heat shock protein STI1 99.7 9.4E-17 3.2E-21 131.7 13.7 116 185-316 3-124 (126)
39 3sz7_A HSC70 cochaperone (SGT) 99.7 9.3E-16 3.2E-20 131.9 13.7 120 183-318 8-129 (164)
40 3gyz_A Chaperone protein IPGC; 99.6 2.6E-15 8.9E-20 128.3 14.7 103 185-302 35-137 (151)
41 3q49_B STIP1 homology and U bo 99.6 6.1E-15 2.1E-19 121.9 12.4 120 186-321 9-133 (137)
42 2xcb_A PCRH, regulatory protei 99.6 1.1E-14 3.9E-19 122.2 14.2 119 185-319 17-135 (142)
43 2vgx_A Chaperone SYCD; alterna 99.6 8.7E-15 3E-19 124.3 13.4 116 185-316 20-135 (148)
44 4ga2_A E3 SUMO-protein ligase 99.6 1.2E-14 4.1E-19 123.6 11.7 112 186-313 31-143 (150)
45 2if4_A ATFKBP42; FKBP-like, al 99.6 4.7E-15 1.6E-19 143.6 9.8 102 187-303 231-333 (338)
46 4ga2_A E3 SUMO-protein ligase 99.5 1.2E-14 4E-19 123.7 9.0 112 192-319 3-114 (150)
47 1elw_A TPR1-domain of HOP; HOP 99.5 1.3E-13 4.4E-18 109.7 13.8 114 185-314 3-116 (118)
48 1a17_A Serine/threonine protei 99.5 6.8E-13 2.3E-17 112.6 18.1 120 179-314 6-125 (166)
49 3urz_A Uncharacterized protein 99.5 2.2E-13 7.6E-18 122.0 15.0 125 186-315 4-133 (208)
50 2dba_A Smooth muscle cell asso 99.5 4.6E-13 1.6E-17 111.4 14.9 116 186-314 28-143 (148)
51 4gyw_A UDP-N-acetylglucosamine 99.5 3.1E-13 1.1E-17 143.3 16.2 116 185-316 8-123 (723)
52 2lni_A Stress-induced-phosphop 99.5 3.9E-13 1.3E-17 109.6 13.2 114 185-314 15-128 (133)
53 2vyi_A SGTA protein; chaperone 99.5 1.4E-12 4.8E-17 105.5 16.2 120 181-316 7-126 (131)
54 1hxi_A PEX5, peroxisome target 99.5 1.3E-13 4.5E-18 112.8 9.9 99 189-302 20-118 (121)
55 1hxv_A Trigger factor; FKBP fo 99.5 7.1E-14 2.4E-18 112.9 8.1 82 74-168 30-112 (113)
56 1elr_A TPR2A-domain of HOP; HO 99.5 5.4E-13 1.8E-17 108.1 13.2 118 185-319 3-127 (131)
57 1zu2_A Mitochondrial import re 99.5 1.6E-13 5.5E-18 117.0 10.1 105 198-318 14-139 (158)
58 2xev_A YBGF; tetratricopeptide 99.5 1E-12 3.4E-17 107.2 14.0 113 189-314 5-120 (129)
59 4dt4_A FKBP-type 16 kDa peptid 99.5 1.1E-13 3.7E-18 119.2 8.2 71 74-148 25-95 (169)
60 1p5q_A FKBP52, FK506-binding p 99.5 1E-13 3.5E-18 134.0 9.0 206 2-297 84-293 (336)
61 2c2l_A CHIP, carboxy terminus 99.4 5.4E-13 1.8E-17 125.5 12.8 102 186-302 4-105 (281)
62 4i17_A Hypothetical protein; T 99.4 2E-12 6.9E-17 116.6 15.7 102 186-302 7-109 (228)
63 2pl2_A Hypothetical conserved 99.4 1.3E-12 4.4E-17 117.8 13.7 113 187-315 6-129 (217)
64 1wao_1 Serine/threonine protei 99.4 1.2E-12 4.1E-17 132.6 14.2 117 184-316 4-120 (477)
65 4gyw_A UDP-N-acetylglucosamine 99.4 9.8E-13 3.4E-17 139.5 14.0 116 186-317 43-158 (723)
66 3k9i_A BH0479 protein; putativ 99.4 5.1E-13 1.8E-17 108.1 8.2 97 198-307 2-98 (117)
67 2h6f_A Protein farnesyltransfe 99.4 1.9E-12 6.5E-17 127.4 13.1 115 186-316 131-246 (382)
68 1na0_A Designed protein CTPR3; 99.4 1.6E-11 5.6E-16 98.2 15.5 113 186-314 9-121 (125)
69 3prb_A FKBP-type peptidyl-prol 99.4 1.2E-12 4.1E-17 118.2 9.6 70 75-148 3-84 (231)
70 2h6f_A Protein farnesyltransfe 99.4 3.1E-12 1.1E-16 125.8 13.3 118 185-318 96-214 (382)
71 3urz_A Uncharacterized protein 99.4 8E-12 2.7E-16 111.8 14.2 107 191-314 59-200 (208)
72 2pl2_A Hypothetical conserved 99.4 7.8E-12 2.7E-16 112.7 14.1 132 186-335 39-181 (217)
73 2k8i_A SLYD, peptidyl-prolyl C 99.4 4.4E-12 1.5E-16 109.8 11.8 69 75-148 4-72 (171)
74 2kck_A TPR repeat; tetratricop 99.4 5.2E-12 1.8E-16 99.4 11.1 100 188-302 8-110 (112)
75 3vtx_A MAMA; tetratricopeptide 99.4 1.4E-11 4.8E-16 107.0 14.9 142 186-333 5-169 (184)
76 3pr9_A FKBP-type peptidyl-prol 99.3 1.7E-12 5.9E-17 110.6 7.7 70 75-148 3-84 (157)
77 4i17_A Hypothetical protein; T 99.3 2.3E-11 7.8E-16 109.6 15.0 114 188-317 44-166 (228)
78 3ieg_A DNAJ homolog subfamily 99.3 3.4E-11 1.1E-15 114.6 15.8 122 187-320 235-356 (359)
79 2e2e_A Formate-dependent nitri 99.3 2.5E-11 8.5E-16 105.0 13.5 112 186-313 44-158 (177)
80 2kr7_A FKBP-type peptidyl-prol 99.3 1.1E-11 3.9E-16 105.3 10.8 71 74-148 7-77 (151)
81 4gco_A Protein STI-1; structur 99.3 2.1E-11 7.1E-16 100.4 12.1 100 235-336 13-112 (126)
82 1ix5_A FKBP; ppiase, isomerase 99.3 2.4E-12 8.3E-17 109.4 6.3 71 75-148 3-85 (151)
83 1hh8_A P67PHOX, NCF-2, neutrop 99.3 3.7E-11 1.3E-15 106.6 14.1 134 185-337 5-153 (213)
84 3vtx_A MAMA; tetratricopeptide 99.3 1.1E-10 3.7E-15 101.4 15.9 113 186-302 39-174 (184)
85 2l6j_A TPR repeat-containing p 99.3 1.5E-12 5E-17 103.1 3.3 95 185-294 3-103 (111)
86 3gyz_A Chaperone protein IPGC; 99.3 5.9E-12 2E-16 107.4 7.2 98 235-334 36-133 (151)
87 2gw1_A Mitochondrial precursor 99.3 4.6E-11 1.6E-15 119.9 15.0 116 182-313 2-117 (514)
88 3uq3_A Heat shock protein STI1 99.3 4.2E-11 1.4E-15 108.6 13.2 111 186-312 139-255 (258)
89 1hh8_A P67PHOX, NCF-2, neutrop 99.2 4.3E-11 1.5E-15 106.3 12.2 102 186-302 37-154 (213)
90 1xnf_A Lipoprotein NLPI; TPR, 99.2 1.6E-10 5.6E-15 106.0 16.5 104 185-303 42-145 (275)
91 2kfw_A FKBP-type peptidyl-prol 99.2 2.6E-11 8.8E-16 107.0 9.8 69 75-148 4-72 (196)
92 2kat_A Uncharacterized protein 99.2 3.1E-10 1.1E-14 90.9 14.6 83 204-301 3-85 (115)
93 2e2e_A Formate-dependent nitri 99.2 5.5E-11 1.9E-15 102.8 10.8 134 188-338 12-148 (177)
94 4abn_A Tetratricopeptide repea 99.2 1.2E-10 4.2E-15 117.6 14.7 119 187-321 171-309 (474)
95 2vsy_A XCC0866; transferase, g 99.2 2E-10 7E-15 118.3 16.2 116 186-317 23-138 (568)
96 3qky_A Outer membrane assembly 99.2 2E-10 7E-15 105.7 14.1 105 186-302 15-130 (261)
97 2vgx_A Chaperone SYCD; alterna 99.2 6E-11 2.1E-15 100.4 9.3 110 207-333 8-117 (148)
98 2yhc_A BAMD, UPF0169 lipoprote 99.2 2E-10 6.8E-15 103.8 13.3 106 186-303 4-130 (225)
99 2y4t_A DNAJ homolog subfamily 99.2 3.5E-10 1.2E-14 111.8 16.1 119 188-318 259-377 (450)
100 3qky_A Outer membrane assembly 99.2 4.6E-10 1.6E-14 103.3 15.7 141 186-338 52-228 (261)
101 4abn_A Tetratricopeptide repea 99.2 2.6E-10 8.8E-15 115.2 14.9 115 186-317 102-226 (474)
102 3as5_A MAMA; tetratricopeptide 99.2 5.6E-10 1.9E-14 95.5 14.9 117 186-318 42-158 (186)
103 2fo7_A Synthetic consensus TPR 99.2 3.8E-10 1.3E-14 91.0 13.0 113 188-316 3-115 (136)
104 3uq3_A Heat shock protein STI1 99.2 4.9E-10 1.7E-14 101.5 14.7 128 186-318 79-221 (258)
105 3fp2_A TPR repeat-containing p 99.2 8E-11 2.7E-15 119.1 10.5 112 175-302 14-125 (537)
106 2pzi_A Probable serine/threoni 99.1 4.4E-11 1.5E-15 126.4 8.2 133 186-336 433-565 (681)
107 2pzi_A Probable serine/threoni 99.1 8.5E-11 2.9E-15 124.2 10.0 111 187-314 468-578 (681)
108 3ieg_A DNAJ homolog subfamily 99.1 5.4E-10 1.9E-14 106.1 14.8 110 186-311 3-115 (359)
109 3as5_A MAMA; tetratricopeptide 99.1 6.3E-10 2.1E-14 95.2 13.7 117 185-317 7-123 (186)
110 4eqf_A PEX5-related protein; a 99.1 5.2E-10 1.8E-14 107.7 14.6 113 191-319 182-296 (365)
111 3cgm_A SLYD, peptidyl-prolyl C 99.1 1.9E-10 6.6E-15 98.2 9.9 77 75-169 4-80 (158)
112 2q7f_A YRRB protein; TPR, prot 99.1 4.2E-10 1.4E-14 101.3 12.6 117 186-318 57-173 (243)
113 3u4t_A TPR repeat-containing p 99.1 5.9E-10 2E-14 102.3 13.7 141 189-336 6-173 (272)
114 4gcn_A Protein STI-1; structur 99.1 4E-10 1.4E-14 92.6 11.0 68 235-302 8-75 (127)
115 2q7f_A YRRB protein; TPR, prot 99.1 1.5E-09 5.2E-14 97.5 15.5 131 186-333 91-221 (243)
116 4eqf_A PEX5-related protein; a 99.1 3.6E-10 1.2E-14 108.8 11.9 102 186-302 213-314 (365)
117 3upv_A Heat shock protein STI1 99.1 1.4E-09 4.7E-14 88.4 13.2 85 235-320 4-88 (126)
118 2y4t_A DNAJ homolog subfamily 99.1 1.8E-09 6.1E-14 106.6 16.7 103 185-302 25-127 (450)
119 2fo7_A Synthetic consensus TPR 99.1 9.5E-10 3.3E-14 88.6 12.2 101 187-302 36-136 (136)
120 1w3b_A UDP-N-acetylglucosamine 99.1 1.2E-09 4E-14 106.2 15.0 143 186-334 169-334 (388)
121 3mkr_A Coatomer subunit epsilo 99.1 9E-10 3.1E-14 103.9 13.6 112 187-302 131-268 (291)
122 2xcb_A PCRH, regulatory protei 99.1 3.9E-10 1.3E-14 94.2 9.8 85 235-320 18-102 (142)
123 1hxi_A PEX5, peroxisome target 99.1 2.6E-09 8.9E-14 86.9 14.5 98 236-335 18-115 (121)
124 1na3_A Designed protein CTPR2; 99.1 1.9E-09 6.6E-14 81.6 12.9 79 235-314 9-87 (91)
125 1fch_A Peroxisomal targeting s 99.1 6.1E-10 2.1E-14 106.9 12.4 101 187-302 218-318 (368)
126 3hym_B Cell division cycle pro 99.1 8.4E-10 2.9E-14 103.8 12.9 121 186-313 193-313 (330)
127 3u4t_A TPR repeat-containing p 99.1 1.1E-09 3.8E-14 100.5 12.8 116 186-317 74-189 (272)
128 1xnf_A Lipoprotein NLPI; TPR, 99.1 3.1E-09 1.1E-13 97.3 15.8 131 191-334 10-140 (275)
129 2vq2_A PILW, putative fimbrial 99.1 3E-09 1E-13 94.1 15.1 97 186-297 8-105 (225)
130 3ma5_A Tetratricopeptide repea 99.1 1.4E-09 4.9E-14 85.2 11.5 67 235-301 7-73 (100)
131 1w3b_A UDP-N-acetylglucosamine 99.1 2.3E-09 8E-14 104.1 15.5 125 186-315 135-282 (388)
132 2ho1_A Type 4 fimbrial biogene 99.1 2.4E-09 8.2E-14 97.2 14.6 111 188-314 73-185 (252)
133 2vq2_A PILW, putative fimbrial 99.1 2.8E-09 9.5E-14 94.3 14.7 65 236-300 114-178 (225)
134 3qou_A Protein YBBN; thioredox 99.0 1.4E-09 4.7E-14 102.3 12.6 117 186-317 117-268 (287)
135 3mkr_A Coatomer subunit epsilo 99.0 2.6E-09 9E-14 100.7 14.6 90 247-337 178-267 (291)
136 3n71_A Histone lysine methyltr 99.0 2.5E-09 8.6E-14 108.2 15.4 134 179-320 302-451 (490)
137 2l6j_A TPR repeat-containing p 99.0 2.9E-09 9.9E-14 83.7 12.6 68 235-302 4-71 (111)
138 3cv0_A Peroxisome targeting si 99.0 2E-09 6.9E-14 101.0 13.7 118 186-318 172-300 (327)
139 1fch_A Peroxisomal targeting s 99.0 1.7E-09 5.8E-14 103.7 13.2 101 188-303 66-166 (368)
140 2ho1_A Type 4 fimbrial biogene 99.0 2E-09 7E-14 97.6 13.0 117 185-317 36-154 (252)
141 1r9h_A FKB-6, FK506 binding pr 99.0 1.8E-10 6.2E-15 96.1 5.1 57 2-59 76-135 (135)
142 3hym_B Cell division cycle pro 99.0 4.3E-09 1.5E-13 98.9 14.9 117 186-318 90-207 (330)
143 4g1t_A Interferon-induced prot 99.0 1.6E-09 5.5E-14 107.9 12.5 122 186-314 51-182 (472)
144 2r5s_A Uncharacterized protein 99.0 1.4E-09 4.8E-14 94.1 10.5 114 189-317 9-157 (176)
145 3sz7_A HSC70 cochaperone (SGT) 99.0 4E-09 1.4E-13 89.9 13.1 101 235-337 11-111 (164)
146 2kc7_A BFR218_protein; tetratr 99.0 2.3E-10 8E-15 88.8 4.8 68 239-307 4-72 (99)
147 2yhc_A BAMD, UPF0169 lipoprote 99.0 3.4E-09 1.2E-13 95.6 13.3 136 186-334 41-213 (225)
148 1qqe_A Vesicular transport pro 99.0 1.8E-09 6.2E-14 101.6 11.4 109 185-302 76-191 (292)
149 3edt_B KLC 2, kinesin light ch 99.0 2.4E-09 8E-14 98.0 11.8 126 185-318 42-183 (283)
150 2hr2_A Hypothetical protein; a 99.0 3.1E-09 1.1E-13 90.5 11.5 87 235-322 11-120 (159)
151 1pc2_A Mitochondria fission pr 99.0 6.2E-09 2.1E-13 87.7 12.7 104 198-317 10-118 (152)
152 3u3w_A Transcriptional activat 99.0 1.7E-09 5.9E-14 101.6 10.2 108 184-299 153-267 (293)
153 1na3_A Designed protein CTPR2; 99.0 4.5E-09 1.5E-13 79.5 10.3 84 185-283 8-91 (91)
154 2kc7_A BFR218_protein; tetratr 99.0 6.1E-09 2.1E-13 80.6 11.2 62 233-302 32-94 (99)
155 1qqe_A Vesicular transport pro 99.0 1.8E-09 6E-14 101.7 9.6 109 185-302 116-232 (292)
156 1w26_A Trigger factor, TF; cha 99.0 1.4E-09 4.8E-14 108.2 9.1 85 74-170 158-242 (432)
157 3fp2_A TPR repeat-containing p 98.9 1.1E-08 3.7E-13 103.3 15.1 83 235-318 310-392 (537)
158 2vsy_A XCC0866; transferase, g 98.9 6.4E-09 2.2E-13 107.0 13.1 102 186-302 57-161 (568)
159 3qww_A SET and MYND domain-con 98.9 1.1E-08 3.8E-13 101.9 14.4 119 182-308 294-425 (433)
160 3q49_B STIP1 homology and U bo 98.9 1.7E-08 5.9E-13 82.5 13.1 85 235-320 9-93 (137)
161 3cv0_A Peroxisome targeting si 98.9 1.7E-08 5.8E-13 94.6 14.8 108 195-318 147-254 (327)
162 2kck_A TPR repeat; tetratricop 98.9 6.3E-09 2.1E-13 81.3 9.9 99 235-335 6-107 (112)
163 3edt_B KLC 2, kinesin light ch 98.9 1E-08 3.4E-13 93.8 11.7 108 184-298 83-198 (283)
164 3rkv_A Putative peptidylprolyl 98.9 1.3E-08 4.5E-13 86.5 11.0 99 235-335 11-127 (162)
165 1a17_A Serine/threonine protei 98.9 1.3E-08 4.3E-13 85.9 10.8 98 186-298 47-146 (166)
166 3ro3_A PINS homolog, G-protein 98.9 1.5E-08 5.1E-13 84.2 11.0 108 183-299 6-119 (164)
167 2xpi_A Anaphase-promoting comp 98.9 2.7E-08 9.2E-13 102.0 14.9 115 188-313 477-593 (597)
168 2gw1_A Mitochondrial precursor 98.8 1.1E-08 3.7E-13 102.4 11.6 77 237-314 414-493 (514)
169 3qwp_A SET and MYND domain-con 98.8 3.3E-08 1.1E-12 98.4 14.8 122 186-315 287-421 (429)
170 2qfc_A PLCR protein; TPR, HTH, 98.8 7.6E-09 2.6E-13 97.1 9.5 107 185-299 154-267 (293)
171 4dip_A Peptidyl-prolyl CIS-tra 98.8 2.5E-09 8.7E-14 87.9 5.4 46 2-47 78-123 (125)
172 3o5e_A Peptidyl-prolyl CIS-tra 98.8 2.2E-09 7.6E-14 90.4 5.2 45 2-46 97-142 (144)
173 3u3w_A Transcriptional activat 98.8 1.4E-08 4.9E-13 95.2 11.2 124 186-318 115-250 (293)
174 1elw_A TPR1-domain of HOP; HOP 98.8 6.5E-08 2.2E-12 76.0 13.5 99 235-335 4-102 (118)
175 3q15_A PSP28, response regulat 98.8 1E-08 3.6E-13 99.7 10.5 109 184-301 180-293 (378)
176 3ulq_A Response regulator aspa 98.8 2.1E-08 7.3E-13 97.5 12.4 125 183-316 140-276 (383)
177 2ifu_A Gamma-SNAP; membrane fu 98.8 1.1E-08 3.6E-13 97.0 9.9 107 185-302 115-227 (307)
178 4a1s_A PINS, partner of inscut 98.8 2.4E-08 8.3E-13 97.3 12.7 104 184-298 46-155 (411)
179 2jwx_A FKBP38NTD, FK506-bindin 98.8 4.5E-09 1.5E-13 89.6 6.0 47 2-48 102-150 (157)
180 3ulq_A Response regulator aspa 98.8 2.6E-08 8.9E-13 96.8 12.3 108 184-300 182-295 (383)
181 2ifu_A Gamma-SNAP; membrane fu 98.8 9.2E-09 3.1E-13 97.4 8.7 109 184-302 74-188 (307)
182 2pbc_A FK506-binding protein 2 98.8 3.7E-09 1.3E-13 83.6 4.6 47 1-47 51-98 (102)
183 3nf1_A KLC 1, kinesin light ch 98.8 2.4E-08 8.1E-13 92.9 10.6 110 185-301 152-310 (311)
184 3o5q_A Peptidyl-prolyl CIS-tra 98.8 5E-09 1.7E-13 86.5 5.2 45 2-46 81-126 (128)
185 2lni_A Stress-induced-phosphop 98.8 6.5E-08 2.2E-12 78.0 11.8 84 235-319 16-99 (133)
186 2xev_A YBGF; tetratricopeptide 98.8 7.3E-08 2.5E-12 77.8 11.9 99 237-336 4-107 (129)
187 2qfc_A PLCR protein; TPR, HTH, 98.8 1.1E-07 3.7E-12 89.1 14.6 121 188-317 117-249 (293)
188 3b7x_A FK506-binding protein 6 98.8 3.6E-09 1.2E-13 88.1 3.8 45 2-46 88-133 (134)
189 4g1t_A Interferon-induced prot 98.8 2.1E-08 7.2E-13 99.8 10.2 119 186-312 94-217 (472)
190 1wao_1 Serine/threonine protei 98.8 4.7E-09 1.6E-13 106.1 5.5 102 186-302 40-154 (477)
191 2xpi_A Anaphase-promoting comp 98.8 6.9E-08 2.4E-12 98.9 14.2 115 186-316 373-487 (597)
192 3ro3_A PINS homolog, G-protein 98.8 2.7E-08 9.4E-13 82.6 9.2 108 185-301 48-161 (164)
193 2vn1_A 70 kDa peptidylprolyl i 98.8 6.3E-09 2.2E-13 86.0 5.1 46 2-47 81-127 (129)
194 2awg_A 38 kDa FK-506 binding p 98.8 7.3E-09 2.5E-13 84.2 5.4 45 2-46 72-117 (118)
195 3ro2_A PINS homolog, G-protein 98.8 3.9E-08 1.3E-12 91.8 11.2 105 186-301 5-115 (338)
196 3kz7_A FK506-binding protein 3 98.8 5.6E-09 1.9E-13 85.0 4.7 44 2-45 73-118 (119)
197 3nf1_A KLC 1, kinesin light ch 98.7 3.1E-08 1.1E-12 92.0 10.4 125 185-317 68-208 (311)
198 1t11_A Trigger factor, TF; hel 98.7 5.3E-09 1.8E-13 102.6 4.8 85 74-170 161-245 (392)
199 1yat_A FK506 binding protein; 98.7 7.5E-09 2.6E-13 83.4 4.9 44 2-45 68-112 (113)
200 2ppn_A FK506-binding protein 1 98.7 7.9E-09 2.7E-13 82.4 4.9 44 2-45 62-106 (107)
201 1jvw_A Macrophage infectivity 98.7 9.1E-09 3.1E-13 88.6 5.3 45 2-46 97-142 (167)
202 3sf4_A G-protein-signaling mod 98.7 5.4E-08 1.8E-12 94.1 11.3 105 186-301 9-119 (406)
203 3q15_A PSP28, response regulat 98.7 6.6E-08 2.2E-12 94.0 11.7 129 183-320 138-277 (378)
204 3gw4_A Uncharacterized protein 98.7 5.4E-08 1.8E-12 84.9 10.0 106 185-299 25-137 (203)
205 2d9f_A FK506-binding protein 8 98.7 8.8E-09 3E-13 85.8 4.3 49 1-49 75-125 (135)
206 2vyi_A SGTA protein; chaperone 98.7 3.4E-07 1.2E-11 73.1 13.4 84 234-318 11-94 (131)
207 2dba_A Smooth muscle cell asso 98.7 2.3E-07 7.8E-12 76.3 12.6 97 235-333 28-127 (148)
208 1dce_A Protein (RAB geranylger 98.7 1.8E-07 6.3E-12 96.4 14.6 116 186-317 63-191 (567)
209 2c2l_A CHIP, carboxy terminus 98.7 1.7E-07 5.6E-12 87.7 12.9 82 235-317 4-85 (281)
210 2y78_A Peptidyl-prolyl CIS-tra 98.7 1.4E-08 4.7E-13 84.3 4.8 43 2-44 89-132 (133)
211 2ond_A Cleavage stimulation fa 98.7 1.4E-07 4.7E-12 89.1 12.4 87 202-302 80-167 (308)
212 2ond_A Cleavage stimulation fa 98.7 1.4E-07 4.9E-12 89.1 12.5 111 188-314 101-213 (308)
213 2lgo_A FKBP; infectious diseas 98.7 1.4E-08 4.7E-13 84.0 4.5 44 2-45 86-130 (130)
214 2f4e_A ATFKBP42; FKBP-like, al 98.7 1.5E-08 5.1E-13 88.5 4.8 47 2-48 112-161 (180)
215 1ouv_A Conserved hypothetical 98.7 3.6E-07 1.2E-11 84.1 14.4 62 236-299 75-144 (273)
216 2v5f_A Prolyl 4-hydroxylase su 98.6 4.5E-07 1.6E-11 71.5 12.7 82 235-317 5-93 (104)
217 1na0_A Designed protein CTPR3; 98.6 5E-07 1.7E-11 71.5 13.1 83 235-318 9-91 (125)
218 2fbn_A 70 kDa peptidylprolyl i 98.6 3.5E-07 1.2E-11 80.2 13.4 98 235-334 38-151 (198)
219 3bee_A Putative YFRE protein; 98.6 6.2E-07 2.1E-11 69.4 12.7 68 235-302 6-76 (93)
220 3sf4_A G-protein-signaling mod 98.6 1.2E-07 4.2E-12 91.5 10.1 108 185-301 186-299 (406)
221 1ihg_A Cyclophilin 40; ppiase 98.6 1.6E-07 5.4E-12 91.7 10.5 91 186-291 273-363 (370)
222 1dce_A Protein (RAB geranylger 98.6 4.3E-07 1.5E-11 93.7 13.7 123 197-335 39-174 (567)
223 4f3v_A ESX-1 secretion system 98.6 3.1E-07 1E-11 85.8 11.2 108 188-310 137-247 (282)
224 1u79_A FKBP-type peptidyl-prol 98.6 2.4E-08 8.1E-13 82.5 3.1 44 2-45 79-128 (129)
225 1zu2_A Mitochondrial import re 98.6 1.9E-07 6.6E-12 79.3 8.7 91 246-337 13-123 (158)
226 3k9i_A BH0479 protein; putativ 98.5 1.9E-07 6.6E-12 74.7 8.0 74 185-273 26-99 (117)
227 1elr_A TPR2A-domain of HOP; HO 98.5 5.9E-07 2E-11 71.8 10.7 98 235-333 4-107 (131)
228 3dra_A Protein farnesyltransfe 98.5 8.8E-07 3E-11 84.0 13.5 113 186-314 67-190 (306)
229 3rjv_A Putative SEL1 repeat pr 98.5 7.9E-07 2.7E-11 79.3 12.5 78 235-314 85-172 (212)
230 3gw4_A Uncharacterized protein 98.5 4.5E-07 1.6E-11 78.9 10.6 107 185-299 65-177 (203)
231 2r5s_A Uncharacterized protein 98.5 4.1E-07 1.4E-11 78.4 9.5 107 186-297 40-172 (176)
232 1ouv_A Conserved hypothetical 98.5 1.9E-06 6.6E-11 79.2 14.7 77 235-316 110-194 (273)
233 3ro2_A PINS homolog, G-protein 98.5 3.4E-07 1.1E-11 85.4 9.5 108 185-301 182-295 (338)
234 2v5f_A Prolyl 4-hydroxylase su 98.5 6.3E-07 2.1E-11 70.7 9.6 83 186-276 5-87 (104)
235 4a1s_A PINS, partner of inscut 98.5 1.9E-07 6.6E-12 90.9 7.8 106 186-300 223-334 (411)
236 3dss_A Geranylgeranyl transfer 98.5 3.6E-06 1.2E-10 80.5 16.0 100 202-317 90-192 (331)
237 3qou_A Protein YBBN; thioredox 98.5 3.9E-07 1.3E-11 85.4 9.0 108 186-297 151-283 (287)
238 3dra_A Protein farnesyltransfe 98.4 2.1E-06 7E-11 81.5 13.3 103 200-318 124-234 (306)
239 3ma5_A Tetratricopeptide repea 98.4 4.8E-07 1.6E-11 70.5 7.4 80 186-280 7-88 (100)
240 1nzn_A CGI-135 protein, fissio 98.4 2.8E-06 9.7E-11 68.9 11.9 101 202-318 17-122 (126)
241 3rjv_A Putative SEL1 repeat pr 98.4 2.3E-06 7.9E-11 76.2 12.7 112 186-314 85-210 (212)
242 3q7a_A Farnesyltransferase alp 98.4 4.6E-06 1.6E-10 80.2 14.6 103 200-318 68-173 (349)
243 3dss_A Geranylgeranyl transfer 98.4 3E-06 1E-10 81.1 12.8 103 198-316 41-156 (331)
244 3n71_A Histone lysine methyltr 98.4 6.9E-07 2.4E-11 90.3 8.3 109 183-298 348-464 (490)
245 1klx_A Cysteine rich protein B 98.3 8.8E-06 3E-10 67.4 13.2 89 192-299 31-127 (138)
246 3q7a_A Farnesyltransferase alp 98.3 3E-06 1E-10 81.6 10.4 112 187-314 89-211 (349)
247 2kat_A Uncharacterized protein 98.3 2E-06 6.8E-11 68.2 7.5 81 186-281 19-101 (115)
248 4f3v_A ESX-1 secretion system 98.3 1.7E-06 6E-11 80.6 7.9 130 191-337 107-240 (282)
249 1hz4_A MALT regulatory protein 98.2 3.5E-06 1.2E-10 81.0 9.8 108 185-301 52-167 (373)
250 1hz4_A MALT regulatory protein 98.2 8.8E-06 3E-10 78.2 12.3 107 186-299 93-204 (373)
251 2ooe_A Cleavage stimulation fa 98.1 9.7E-06 3.3E-10 82.3 11.5 102 187-302 273-389 (530)
252 2ooe_A Cleavage stimulation fa 98.1 4.3E-05 1.5E-09 77.5 15.2 116 203-334 255-385 (530)
253 2xm6_A Protein corresponding t 98.1 3.2E-05 1.1E-09 77.7 13.3 77 235-314 363-450 (490)
254 3o48_A Mitochondria fission 1 98.1 5.6E-05 1.9E-09 61.5 12.0 83 235-318 40-126 (134)
255 1y8m_A FIS1; mitochondria, unk 98.0 0.00011 3.6E-09 60.6 12.7 82 235-317 39-124 (144)
256 3ly7_A Transcriptional activat 97.9 0.00011 3.9E-09 70.7 12.5 109 189-302 199-343 (372)
257 1xi4_A Clathrin heavy chain; a 97.9 7.3E-05 2.5E-09 82.7 12.2 107 188-318 1197-1328(1630)
258 3e4b_A ALGK; tetratricopeptide 97.9 7.4E-05 2.5E-09 74.5 11.5 115 188-314 178-328 (452)
259 1klx_A Cysteine rich protein B 97.8 0.00022 7.5E-09 58.8 12.3 94 199-316 8-105 (138)
260 1b89_A Protein (clathrin heavy 97.8 4.7E-05 1.6E-09 75.2 9.0 105 188-318 124-255 (449)
261 2xm6_A Protein corresponding t 97.8 0.00028 9.6E-09 70.7 14.7 93 186-297 39-143 (490)
262 4b4t_Q 26S proteasome regulato 97.8 0.00015 5.2E-09 70.7 12.3 116 184-299 53-205 (434)
263 3u64_A Protein TP_0956; tetrat 97.7 0.00011 3.6E-09 68.3 9.5 91 198-301 175-272 (301)
264 1xi4_A Clathrin heavy chain; a 97.7 0.00014 4.8E-09 80.5 11.3 108 190-302 1053-1167(1630)
265 1pc2_A Mitochondria fission pr 97.7 0.00021 7.2E-09 60.0 9.9 78 187-278 33-114 (152)
266 3qwp_A SET and MYND domain-con 97.6 5E-05 1.7E-09 75.4 6.2 93 183-282 326-426 (429)
267 4b4t_Q 26S proteasome regulato 97.6 0.00017 5.8E-09 70.4 9.7 105 185-298 134-245 (434)
268 3qww_A SET and MYND domain-con 97.6 9.7E-05 3.3E-09 73.3 7.2 75 184-265 338-412 (433)
269 3e4b_A ALGK; tetratricopeptide 97.5 0.00043 1.5E-08 69.0 11.6 74 235-315 283-365 (452)
270 3mv2_B Coatomer subunit epsilo 97.5 0.00039 1.3E-08 65.6 9.9 86 200-303 192-287 (310)
271 3ffl_A Anaphase-promoting comp 97.5 0.00087 3E-08 56.7 10.8 101 189-295 23-148 (167)
272 3bee_A Putative YFRE protein; 97.3 0.00064 2.2E-08 52.1 6.9 68 186-268 6-76 (93)
273 2ff4_A Probable regulatory pro 97.2 0.0087 3E-07 58.3 16.1 126 186-313 115-254 (388)
274 3mv2_B Coatomer subunit epsilo 97.1 0.0029 9.9E-08 59.6 10.8 64 237-300 102-167 (310)
275 2lkn_A AH receptor-interacting 97.1 9.7E-05 3.3E-09 63.0 0.4 34 1-34 74-116 (165)
276 3gty_X Trigger factor, TF; cha 97.0 0.00094 3.2E-08 66.1 6.6 72 75-170 156-227 (433)
277 1hxv_A Trigger factor; FKBP fo 96.9 0.00024 8.3E-09 56.7 1.7 39 2-45 73-112 (113)
278 2k8i_A SLYD, peptidyl-prolyl C 96.9 0.0015 5E-08 56.1 6.1 24 2-25 48-71 (171)
279 1nzn_A CGI-135 protein, fissio 96.6 0.016 5.6E-07 46.7 9.9 43 234-276 73-115 (126)
280 1b89_A Protein (clathrin heavy 96.5 0.00094 3.2E-08 66.0 2.5 52 236-295 123-174 (449)
281 3prb_A FKBP-type peptidyl-prol 96.4 0.0021 7.2E-08 57.7 3.7 25 2-26 60-84 (231)
282 3o48_A Mitochondria fission 1 96.3 0.011 3.9E-07 47.9 7.4 43 234-276 77-119 (134)
283 1y8m_A FIS1; mitochondria, unk 96.3 0.018 6E-07 47.4 8.5 41 235-275 77-117 (144)
284 3ffl_A Anaphase-promoting comp 96.0 0.012 4.3E-07 49.6 6.6 94 185-279 62-165 (167)
285 3u64_A Protein TP_0956; tetrat 96.0 0.013 4.4E-07 54.4 6.9 62 251-312 179-247 (301)
286 4h7y_A Dual specificity protei 95.8 0.19 6.6E-06 41.6 12.7 109 186-303 20-128 (161)
287 3cgm_A SLYD, peptidyl-prolyl C 95.6 0.035 1.2E-06 46.8 7.5 38 2-46 43-80 (158)
288 4dt4_A FKBP-type 16 kDa peptid 95.4 0.011 3.6E-07 50.5 3.9 37 2-45 71-107 (169)
289 4gns_B Protein CSD3, chitin bi 95.4 0.12 4.1E-06 54.4 12.5 59 237-295 339-397 (754)
290 2kfw_A FKBP-type peptidyl-prol 95.1 0.015 5E-07 50.9 3.9 37 2-45 48-84 (196)
291 2kr7_A FKBP-type peptidyl-prol 95.1 0.08 2.7E-06 44.2 8.4 37 2-45 53-89 (151)
292 4e6h_A MRNA 3'-END-processing 94.8 0.041 1.4E-06 57.5 7.1 98 237-336 436-535 (679)
293 4e6h_A MRNA 3'-END-processing 94.8 0.29 9.9E-06 51.1 13.3 102 237-339 471-575 (679)
294 3txn_A 26S proteasome regulato 94.7 0.16 5.6E-06 49.2 10.5 99 191-298 104-210 (394)
295 3pr9_A FKBP-type peptidyl-prol 94.7 0.007 2.4E-07 51.1 0.7 24 2-25 60-83 (157)
296 3kae_A CDC27, possible protein 94.7 0.27 9.3E-06 41.6 10.1 68 235-302 62-147 (242)
297 1ix5_A FKBP; ppiase, isomerase 94.4 0.013 4.4E-07 49.1 1.7 37 2-45 61-97 (151)
298 1zbp_A Hypothetical protein VP 94.0 0.38 1.3E-05 43.9 10.5 61 244-304 6-66 (273)
299 1w26_A Trigger factor, TF; cha 93.6 0.074 2.5E-06 52.4 5.5 41 2-46 201-241 (432)
300 3ly7_A Transcriptional activat 93.4 0.22 7.4E-06 47.9 8.3 69 191-276 282-350 (372)
301 1ya0_A SMG-7 transcript varian 92.7 0.85 2.9E-05 45.6 11.8 80 236-316 153-232 (497)
302 3mv2_A Coatomer subunit alpha; 92.7 0.46 1.6E-05 44.4 9.1 114 189-302 117-240 (325)
303 3mkr_B Coatomer subunit alpha; 92.6 1 3.4E-05 42.1 11.2 113 189-301 105-230 (320)
304 4b4t_R RPN7, 26S proteasome re 92.3 0.28 9.7E-06 48.2 7.7 101 189-301 134-240 (429)
305 1zbp_A Hypothetical protein VP 90.9 2.8 9.5E-05 38.1 11.9 63 194-271 5-67 (273)
306 2v6y_A AAA family ATPase, P60 90.1 0.25 8.4E-06 36.6 3.6 41 177-217 1-42 (83)
307 4gns_B Protein CSD3, chitin bi 89.9 0.44 1.5E-05 50.1 6.6 59 188-261 339-397 (754)
308 2cpt_A SKD1 protein, vacuolar 87.6 0.57 1.9E-05 37.1 4.3 42 176-217 7-49 (117)
309 2uy1_A Cleavage stimulation fa 87.4 7.6 0.00026 38.5 13.6 108 189-302 216-353 (493)
310 2uy1_A Cleavage stimulation fa 86.8 6.5 0.00022 39.0 12.7 54 203-272 196-249 (493)
311 4g26_A Pentatricopeptide repea 86.8 6.8 0.00023 39.0 12.8 96 192-301 111-209 (501)
312 2w2u_A Hypothetical P60 katani 85.3 0.6 2.1E-05 34.5 3.1 38 180-217 13-50 (83)
313 4b4t_P 26S proteasome regulato 84.6 7.1 0.00024 38.2 11.5 105 185-298 136-247 (445)
314 4g26_A Pentatricopeptide repea 83.9 9.8 0.00033 37.8 12.4 92 196-301 80-174 (501)
315 2v6x_A Vacuolar protein sortin 83.7 0.75 2.6E-05 34.1 3.0 41 177-217 4-44 (85)
316 1t11_A Trigger factor, TF; hel 83.7 0.77 2.6E-05 44.5 4.0 41 2-46 204-244 (392)
317 1wfd_A Hypothetical protein 15 82.6 1.4 4.9E-05 33.2 4.2 39 180-218 9-47 (93)
318 3mkq_B Coatomer subunit alpha; 82.3 2.8 9.5E-05 35.7 6.4 81 187-295 35-115 (177)
319 4a5x_A MITD1, MIT domain-conta 79.1 2.1 7.4E-05 31.7 4.1 33 185-217 15-47 (86)
320 3mkq_A Coatomer beta'-subunit; 78.5 6.9 0.00024 40.7 9.5 56 236-291 682-745 (814)
321 3mkq_B Coatomer subunit alpha; 78.2 5 0.00017 34.1 6.6 46 246-296 16-61 (177)
322 4fhn_B Nucleoporin NUP120; pro 77.1 3 0.0001 46.2 6.4 104 190-293 846-962 (1139)
323 3mkq_A Coatomer beta'-subunit; 77.0 3.8 0.00013 42.6 7.0 19 277-295 744-762 (814)
324 3txn_A 26S proteasome regulato 76.4 55 0.0019 31.3 15.0 132 186-319 19-191 (394)
325 1ya0_A SMG-7 transcript varian 75.9 8.3 0.00028 38.4 8.6 80 187-281 153-232 (497)
326 2crb_A Nuclear receptor bindin 75.6 4.3 0.00015 30.2 4.7 28 269-296 15-42 (97)
327 1qsa_A Protein (soluble lytic 75.4 15 0.00053 37.5 10.7 54 244-297 294-347 (618)
328 4b4t_S RPN3, 26S proteasome re 75.2 5.3 0.00018 39.9 6.9 68 235-302 231-303 (523)
329 2ff4_A Probable regulatory pro 74.3 25 0.00085 33.5 11.4 72 241-313 121-214 (388)
330 3t5v_B Nuclear mRNA export pro 74.3 7.6 0.00026 38.2 7.8 105 198-302 138-254 (455)
331 1wy6_A Hypothetical protein ST 71.4 22 0.00075 29.0 8.3 63 237-299 92-155 (172)
332 2wb7_A PT26-6P; extra chromoso 69.7 15 0.0005 36.2 8.3 44 179-222 422-468 (526)
333 2crb_A Nuclear receptor bindin 68.0 3.9 0.00013 30.5 3.0 35 183-217 12-46 (97)
334 2vkj_A TM1634; membrane protei 66.1 12 0.00042 27.6 5.3 31 184-214 51-81 (106)
335 4a5x_A MITD1, MIT domain-conta 65.6 37 0.0013 24.8 9.0 27 272-298 19-45 (86)
336 2o8p_A 14-3-3 domain containin 64.5 24 0.00081 31.1 7.9 59 197-263 136-196 (227)
337 3kae_A CDC27, possible protein 63.0 29 0.001 29.3 7.7 51 241-296 39-89 (242)
338 2npm_A 14-3-3 domain containin 60.8 23 0.0008 31.8 7.4 53 203-263 173-226 (260)
339 2br9_A 14-3-3E, 14-3-3 protein 58.9 18 0.00063 32.0 6.3 52 203-262 147-200 (234)
340 2dl1_A Spartin; SPG20, MIT, st 56.2 17 0.00058 28.3 4.9 43 250-300 18-60 (116)
341 3spa_A Mtrpol, DNA-directed RN 56.1 61 0.0021 35.3 10.7 99 188-298 129-230 (1134)
342 3uzd_A 14-3-3 protein gamma; s 55.5 23 0.00078 31.7 6.3 53 202-262 147-201 (248)
343 3htx_A HEN1; HEN1, small RNA m 55.1 13 0.00044 39.6 5.3 64 75-138 562-649 (950)
344 2dl1_A Spartin; SPG20, MIT, st 54.7 23 0.00077 27.6 5.3 73 181-253 17-96 (116)
345 3ax2_A Mitochondrial import re 54.3 36 0.0012 24.1 6.0 29 274-302 22-50 (73)
346 1o9d_A 14-3-3-like protein C; 54.2 24 0.00082 31.8 6.3 52 203-262 152-205 (260)
347 3ubw_A 14-3-3E, 14-3-3 protein 54.0 25 0.00085 31.6 6.3 52 203-262 173-226 (261)
348 3lpz_A GET4 (YOR164C homolog); 53.5 94 0.0032 29.0 10.5 111 182-292 31-159 (336)
349 2jpu_A ORF C02003 protein; sol 52.1 38 0.0013 26.9 6.5 31 184-214 5-35 (129)
350 3iqu_A 14-3-3 protein sigma; s 50.5 27 0.00093 30.9 5.9 53 202-262 149-203 (236)
351 2ymb_A MITD1, MIT domain-conta 49.2 3.6 0.00012 37.1 0.0 41 179-219 16-56 (257)
352 2vkj_A TM1634; membrane protei 49.1 46 0.0016 24.5 5.9 31 269-299 53-83 (106)
353 4b4t_P 26S proteasome regulato 48.9 1.6E+02 0.0054 28.5 11.9 80 234-314 136-224 (445)
354 2cpt_A SKD1 protein, vacuolar 47.8 95 0.0033 24.0 9.5 15 288-302 44-58 (117)
355 4h7y_A Dual specificity protei 47.7 62 0.0021 26.7 7.2 70 199-284 73-142 (161)
356 2ijq_A Hypothetical protein; s 47.2 64 0.0022 26.7 7.4 68 189-263 35-103 (161)
357 4b4t_R RPN7, 26S proteasome re 45.8 26 0.0009 33.9 5.7 63 236-298 132-197 (429)
358 2cfu_A SDSA1; SDS-hydrolase, l 45.0 33 0.0011 35.3 6.6 50 237-286 451-500 (658)
359 1om2_A Protein (mitochondrial 44.8 37 0.0013 25.4 5.0 28 274-301 25-52 (95)
360 2rpa_A Katanin P60 ATPase-cont 44.6 84 0.0029 22.5 7.9 26 273-298 16-41 (78)
361 2cfu_A SDSA1; SDS-hydrolase, l 44.4 87 0.003 32.1 9.6 52 267-319 447-498 (658)
362 3efz_A 14-3-3 protein; 14-3-3, 44.1 28 0.00096 31.4 5.1 55 202-264 168-226 (268)
363 3qnk_A Putative lipoprotein; a 43.8 1.6E+02 0.0056 28.9 11.4 48 251-298 153-211 (517)
364 3lvg_A Clathrin heavy chain 1; 42.9 0.075 2.6E-06 52.7 -12.8 100 189-317 147-276 (624)
365 2w2u_A Hypothetical P60 katani 41.9 96 0.0033 22.4 8.6 21 277-297 27-47 (83)
366 3t5x_A PCI domain-containing p 41.6 59 0.002 27.9 6.7 53 234-286 13-70 (203)
367 3ax2_A Mitochondrial import re 41.5 24 0.0008 25.1 3.3 31 186-216 17-47 (73)
368 2wpv_A GET4, UPF0363 protein Y 41.3 1.5E+02 0.0051 27.3 9.8 27 267-293 132-158 (312)
369 4gq2_M Nucleoporin NUP120; bet 40.9 36 0.0012 36.7 6.3 51 243-297 818-868 (950)
370 3r9m_A BRO1 domain-containing 40.6 52 0.0018 31.2 6.7 30 269-298 253-282 (376)
371 4gq2_M Nucleoporin NUP120; bet 40.3 54 0.0018 35.3 7.6 75 190-264 844-926 (950)
372 2yin_A DOCK2, dedicator of cyt 37.7 44 0.0015 32.5 5.8 95 190-285 39-142 (436)
373 2v6y_A AAA family ATPase, P60 37.7 1.1E+02 0.0038 21.9 8.2 43 277-324 19-68 (83)
374 4fhn_B Nucleoporin NUP120; pro 37.3 46 0.0016 36.6 6.6 52 241-296 818-869 (1139)
375 2zan_A Vacuolar protein sortin 34.0 8.6 0.00029 37.6 0.0 40 180-219 5-44 (444)
376 4abx_A DNA repair protein RECN 33.8 1.5E+02 0.0052 24.5 7.9 61 254-314 75-135 (175)
377 3myv_A SUSD superfamily protei 33.4 95 0.0033 30.0 7.5 29 235-263 190-218 (454)
378 1zb1_A BRO1 protein; AIP1, BRO 32.7 1.6E+02 0.0056 27.8 8.9 30 269-298 257-286 (392)
379 3kez_A Putative sugar binding 30.6 1E+02 0.0036 29.8 7.3 29 235-263 196-224 (461)
380 3myv_A SUSD superfamily protei 30.6 1.1E+02 0.0038 29.6 7.5 47 251-297 164-218 (454)
381 1om2_A Protein (mitochondrial 30.6 62 0.0021 24.2 4.2 39 179-217 13-51 (95)
382 3mcx_A SUSD superfamily protei 30.4 1.1E+02 0.0037 29.8 7.4 30 235-264 202-231 (477)
383 1wfd_A Hypothetical protein 15 30.2 1.6E+02 0.0056 21.6 9.8 14 288-301 41-54 (93)
384 3i4g_A SUSD-like carbohydrate 29.6 2.3E+02 0.0078 28.0 9.7 48 251-298 167-227 (528)
385 3spa_A Mtrpol, DNA-directed RN 29.2 4.6E+02 0.016 28.7 12.2 67 235-301 127-199 (1134)
386 2rkl_A Vacuolar protein sortin 27.4 55 0.0019 21.6 3.1 40 178-217 12-51 (53)
387 2oo2_A Hypothetical protein AF 27.2 42 0.0014 24.6 2.7 36 179-214 28-63 (86)
388 3t5x_A PCI domain-containing p 26.8 1.6E+02 0.0055 25.0 7.0 30 271-300 16-45 (203)
389 3kez_A Putative sugar binding 26.7 1.3E+02 0.0044 29.2 7.2 48 251-298 170-225 (461)
390 2pmr_A Uncharacterized protein 26.6 43 0.0015 24.6 2.7 36 179-214 32-67 (87)
391 2ijq_A Hypothetical protein; s 26.6 2.7E+02 0.0091 22.9 8.3 58 241-298 38-104 (161)
392 3lew_A SUSD-like carbohydrate 25.7 1.5E+02 0.005 29.1 7.4 48 251-298 174-232 (495)
393 2v6x_A Vacuolar protein sortin 24.9 1.9E+02 0.0065 20.6 9.7 20 278-297 22-41 (85)
394 2rpa_A Katanin P60 ATPase-cont 24.5 70 0.0024 23.0 3.5 27 237-263 14-40 (78)
395 3mcx_A SUSD superfamily protei 24.5 1.4E+02 0.0048 29.0 7.0 49 251-299 176-232 (477)
396 2cwy_A Hypothetical protein TT 22.8 1.5E+02 0.005 21.9 5.2 62 191-263 6-67 (94)
397 2xze_A STAM-binding protein; h 22.5 54 0.0019 26.6 2.9 46 176-221 30-75 (146)
398 2xs1_A Programmed cell death 6 22.1 2.9E+02 0.0099 28.5 9.0 30 269-298 260-289 (704)
399 2yhe_A SEC-alkyl sulfatase; hy 27.3 19 0.00066 37.2 0.0 52 237-288 463-514 (668)
400 3lew_A SUSD-like carbohydrate 21.4 92 0.0032 30.6 4.9 31 234-264 202-232 (495)
401 3otn_A SUSD superfamily protei 21.3 3.6E+02 0.012 26.1 9.3 48 251-298 160-226 (482)
402 4b4t_S RPN3, 26S proteasome re 21.0 6.1E+02 0.021 25.0 10.8 104 185-302 269-377 (523)
403 3ebb_A Phospholipase A2-activa 20.9 1.7E+02 0.0057 26.8 6.3 51 232-282 209-261 (304)
No 1
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=100.00 E-value=1.8e-48 Score=394.70 Aligned_cols=323 Identities=28% Similarity=0.488 Sum_probs=284.3
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCC-CCCCCCCCCeeeEEEEeeEEEeeeeecCCCceEEEEeecccCCCCCCCCCCCCeE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSP-LMPVVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLL 80 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~-~~~~ip~~~~l~~~vel~~~~~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v 80 (414)
||.+|++||++.|+|||++|||.. .+|.||+|++|+|+|+|++|.. .|++.||+++++++++|.|. .+|..|+.|
T Consensus 93 ~l~~m~~Ge~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~-~~~~~dg~~~k~i~~~g~~~---~~p~~g~~V 168 (457)
T 1kt0_A 93 GVATMKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKG-EDLFEDGGIIRRTKRKGEGY---SNPNEGATV 168 (457)
T ss_dssp HHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EETTSSSSEEEEEEECCBCS---CCCCTTCEE
T ss_pred HHhhCCCCCEEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceeec-ccccCCcceEEEEEecCCCC---CCCCCCCEE
Confidence 789999999999999999999984 5689999999999999999975 58899999999999999986 457899999
Q ss_pred EEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCC---chHHHHHHhhhcCCCCeEEEEecCCCccccCCCC-CCCCCC
Q 015006 81 CVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGL---VPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRP-ANVPEG 156 (414)
Q Consensus 81 ~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~---v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~-~~ip~~ 156 (414)
+|||+|++ + |++| +++ +++|.+|+|. ++++|+.|+..|+.||++.|.++|.++|+..|.. ..||++
T Consensus 169 ~v~y~g~~-~--g~~f-~~~------~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~ 238 (457)
T 1kt0_A 169 EIHLEGRC-G--GRMF-DCR------DVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPN 238 (457)
T ss_dssp EEEEEEEE-T--TEEE-EEE------EEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTT
T ss_pred EEEEEEEe-C--CeEE-ecC------ceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCC
Confidence 99999998 4 8887 442 5999999874 8999999999999999999999999999999875 369999
Q ss_pred cceEEEEEEcccCCCCCCCCCchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhH
Q 015006 157 AHIQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNL 236 (414)
Q Consensus 157 ~~l~~eieL~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~ 236 (414)
+.+.|.+.+..+......+.+........+..++..|+.+++.|+|.+|+..|.+|+.+........+++......+...
T Consensus 239 ~~l~y~~~l~~~~~A~~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~ 318 (457)
T 1kt0_A 239 AELIYEVTLKSFEKAKESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLA 318 (457)
T ss_dssp CCEEEEEEEEEEECCCCGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHH
T ss_pred CEEEEEhhhhhcccCcchhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHH
Confidence 99999999999999888889999999999999999999999999999999999999996554333334556667778889
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
+|+|+|.||+++++|++|+.+|++||+++|+++++||++|.+|+.+|+|++|+.+|++|++++|++ ..+...+..+...
T Consensus 319 ~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~l~~~~~~ 397 (457)
T 1kt0_A 319 AFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNEFESAKGDFEKVLEVNPQN-KAARLQISMCQKK 397 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999998 6899999999999
Q ss_pred HHHHHHHHHHHHHhhccCCCCCc
Q 015006 317 RQEVESKARKQFKGLFDKKPGEI 339 (414)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~ 339 (414)
+.+..++++..+++||.+.....
T Consensus 398 ~~~~~~a~~~~~~~~f~k~~~~d 420 (457)
T 1kt0_A 398 AKEHNERDRRIYANMFKKFAEQD 420 (457)
T ss_dssp HHHHHHHHHHHHHHC--------
T ss_pred HHHHHHHHHHHHHHHHhhhhhcc
Confidence 99999999999999998765543
No 2
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=100.00 E-value=6.6e-42 Score=333.25 Aligned_cols=273 Identities=30% Similarity=0.465 Sum_probs=205.1
Q ss_pred CceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCC-CchHHHHHHhhhcCCCCe
Q 015006 55 GRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGEI 133 (414)
Q Consensus 55 g~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~-~v~~gle~~l~~M~~GE~ 133 (414)
++|.++|+++|.|.. |..|+.|+|||+|++.+ +|++| ++++. +++|++|.+|.| .+++||+.+|.+|++||+
T Consensus 49 ~~~~~~~~~~g~g~~----~~~gd~v~v~y~g~~~~-~g~~f-d~~~~-~~~~~~~~lg~~~~~i~g~e~~l~~m~~Ge~ 121 (338)
T 2if4_A 49 EKVSKQIIKEGHGSK----PSKYSTCFLHYRAWTKN-SQHKF-EDTWH-EQQPIELVLGKEKKELAGLAIGVASMKSGER 121 (338)
T ss_dssp TTEEEEEEECCBSCC----CCTTCEEEEEEEEEETT-TCCCC-EEHHH-HTCCEEEETTSCCGGGHHHHHHHHHCCBTCE
T ss_pred CCeEEEEEeCCCCCC----CCCCCEEEEEEEEEEcC-CCcEe-ecccC-CCCCeEEEcCCCCcccHHHHHHHhcCCCCCe
Confidence 479999999999974 46899999999999865 48888 55443 468999999999 899999999999999999
Q ss_pred EEEEecCCCccccCCC--CCCCCCCcceEEEEEEcccCCCC---CCCCCchhhhhHHHHHHHhhhccccccccHHHHHHH
Q 015006 134 ALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEKPK---DWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAK 208 (414)
Q Consensus 134 ~~v~i~~~~~yg~~~~--~~~ip~~~~l~~eieL~~~~~~~---~~~~~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~ 208 (414)
+.|+|||.++||..+. .+.||+++++.|.|+|+++.... ..|.++.+++...+..++..|+.+++.|+|.+|+..
T Consensus 122 ~~~~i~~~~~yg~~~~~~~~~ip~~~~l~f~v~L~~~~~~~e~~~~~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~ 201 (338)
T 2if4_A 122 ALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAADRRKMDGNSLFKEEKLEEAMQQ 201 (338)
T ss_dssp EEEEECGGGSSCSSCCCSSSCCCTTCCEEEEEEEEEEECCCCCBTTTBCCHHHHHHHHHHHHHHHHHTCSSSCCHHHHHH
T ss_pred EEEEECHHHhcCCCCCCCCCCCCCCCcEEEEEEEEEecCCccccccccCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999999999987 36899999999999999987644 467889999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCh------HHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 015006 209 YEKVLRDFNHVNPQDD------EEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMAL 282 (414)
Q Consensus 209 Y~~al~~~~~~~p~~~------~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l 282 (414)
|.+|+.+. |.+. ........+...+|+|+|.||+++++|.+|+.+|.++|+++|+++++||++|.+|..+
T Consensus 202 y~~Al~~~----p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~a~~~~ 277 (338)
T 2if4_A 202 YEMAIAYM----GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIVLTEEEKNPKALFRRGKAKAEL 277 (338)
T ss_dssp HHHHHHHS----CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHh----ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHc
Confidence 99999943 3221 1122334445579999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCc
Q 015006 283 GEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKPGEI 339 (414)
Q Consensus 283 ~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (414)
|+|++|+.+|++|++++|++ ..++..|..+........++++..|+++|...+...
T Consensus 278 g~~~~A~~~l~~al~l~p~~-~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 278 GQMDSARDDFRKAQKYAPDD-KAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp TCHHHHHHHHHHTTC------------------------------------------
T ss_pred CCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 99999999999999999998 789999999988888888888899999998766543
No 3
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=100.00 E-value=5e-38 Score=305.56 Aligned_cols=277 Identities=29% Similarity=0.496 Sum_probs=245.3
Q ss_pred eeeeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCC---chHHHHH
Q 015006 47 QVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGL---VPEGFEM 123 (414)
Q Consensus 47 ~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~---v~~gle~ 123 (414)
.+.|+++||+|+|+|+++|.|. .+|..|+.|+|||+|++ + |++| |++ |++|.+|.|. ++++|+.
T Consensus 17 ~~~~~~~~~~~~~~~~~~g~g~---~~p~~~~~v~v~y~g~~-~--g~~f-d~~------~~~f~lG~g~~~~~~~~~e~ 83 (336)
T 1p5q_A 17 RGSHMEEDGGIIRRIQTRGEGY---AKPNEGAIVEVALEGYY-K--DKLF-DQR------ELRFEIGEGENLDLPYGLER 83 (336)
T ss_dssp -----CCTTSEEEEEEECCCCS---CCCCTTCEEEEEEEEEE-T--TEEE-EEE------EEEEETTCGGGGTCCHHHHH
T ss_pred cceeecCCCcEEEEEEeCCCCC---CCCCCCCeEEEEEEEEE-C--CEEE-ecC------CeEEEeCCCCccccchHHHH
Confidence 3467889999999999999996 34679999999999998 4 8888 443 7999999987 5899999
Q ss_pred HhhhcCCCCeEEEEecCCCccccCCCCC-CCCCCcceEEEEEEcccCCCCCCCCCchhhhhHHHHHHHhhhccccccccH
Q 015006 124 CVRLMLPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKF 202 (414)
Q Consensus 124 ~l~~M~~GE~~~v~i~~~~~yg~~~~~~-~ip~~~~l~~eieL~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~g~y 202 (414)
||.+|++||++.|.|+|+++||..|... .||+++++.|++.|.++......+.+..+.....+..+...|+.+++.|+|
T Consensus 84 al~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~~a~~~~p~~a~~~~~~g~~~~~~g~~ 163 (336)
T 1p5q_A 84 AIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWEMNSEEKLEQSTIVKERGTVYFKEGKY 163 (336)
T ss_dssp HHTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGGCCHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHhcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhcCCHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 9999999999999999999999999765 699999999999999999988888888888888999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Q 015006 203 ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMAL 282 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l 282 (414)
.+|+..|.+|+.+.........+.......+...+|+|+|.||+++++|++|+.+|.+||+++|+++++++++|.+|..+
T Consensus 164 ~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~ 243 (336)
T 1p5q_A 164 KQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLSRRGEAHLAV 243 (336)
T ss_dssp HHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhhccccCChHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC
Confidence 99999999999965433222344556667777899999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 015006 283 GEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKPG 337 (414)
Q Consensus 283 ~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (414)
|++++|+.+|++|++++|++ ..+...+..+...+.+..++++..|++||.+...
T Consensus 244 g~~~~A~~~~~~al~l~P~~-~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~ 297 (336)
T 1p5q_A 244 NDFELARADFQKVLQLYPNN-KAAKTQLAVCQQRIRRQLAREKKLYANMFERLAE 297 (336)
T ss_dssp TCHHHHHHHHHHHHHHCSSC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999998 6899999999999999999999999999976543
No 4
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=100.00 E-value=5.6e-32 Score=264.34 Aligned_cols=163 Identities=31% Similarity=0.499 Sum_probs=147.8
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCC------CCCCCCeeeEEEEeeEEEeeeeecCCCceEEEEeecccCCCCCCCCC
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMP------VVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPL 75 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~------~ip~~~~l~~~vel~~~~~~~dv~~dg~~~k~i~~~G~g~~~~~~p~ 75 (414)
||.+|++||+++|+|+|+||||+.+.| .||||++|.|+|+|++|..+.|++.|++++++++++|.|. .+|.
T Consensus 185 ~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip~~~~l~~~vel~~~~~v~dv~~d~~~~~~i~~~g~g~---~~~~ 261 (356)
T 3jxv_A 185 AVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTVTEIGDDKKILKKVLKEXEGY---ERPN 261 (356)
T ss_dssp HHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBCTTCCEEEEEEEEEEECEEEESTTCCEEEEEEECCBSS---CCCC
T ss_pred HHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCCCCcEEEEEEEEEEEecccccccccceeEEeeeccccc---CCCC
Confidence 789999999999999999999985432 5999999999999999999999999999999999999995 3468
Q ss_pred CCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCC--CCCC
Q 015006 76 HDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLR--PANV 153 (414)
Q Consensus 76 ~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~--~~~i 153 (414)
.|+.|+|||+|++.| |++|+++... +++|+.|.+|.+.+++||+.+|.+|++||++.|+|||.++||..+. ...|
T Consensus 262 ~gd~V~v~y~g~l~d--G~~fd~~~~~-~~~p~~f~~G~g~~i~G~e~~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~~~I 338 (356)
T 3jxv_A 262 EGAVVTVKITGKLQD--GTVFLKKGHD-EQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIV 338 (356)
T ss_dssp TTCEEEEEEEEEESS--SCEEEEESCT-TSCCCEEETTTTSSCHHHHHHHTTCCBTCEEEEEECGGGTTTTSCEESSSEE
T ss_pred CCCEEEEEEEEEECC--CCEEeecccc-CCcCEEEEECCCccchHHHHHHhCCCCCCEEEEEEChHHccCCCCcCCCCcC
Confidence 999999999999976 9999666444 5789999999999999999999999999999999999999998874 3579
Q ss_pred CCCcceEEEEEEcccCC
Q 015006 154 PEGAHIQWEIELLGFEK 170 (414)
Q Consensus 154 p~~~~l~~eieL~~~~~ 170 (414)
|+|++|+|+|+|++|.+
T Consensus 339 p~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 339 PPNSTVIYEVELVSFVK 355 (356)
T ss_dssp CTTCCEEEEEEEEEEEC
T ss_pred CcCCeEEEEEEEEEEEc
Confidence 99999999999998754
No 5
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.97 E-value=7.6e-31 Score=265.39 Aligned_cols=279 Identities=24% Similarity=0.351 Sum_probs=175.0
Q ss_pred eeeec--CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHh
Q 015006 48 VRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCV 125 (414)
Q Consensus 48 ~~dv~--~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l 125 (414)
..||+ .+++|.++|+++|.|.. +|..|+.|+|||+|++.+ |++| ++++. ++.|++|.+|.+.+++||+.+|
T Consensus 22 ~~~~~~~~~~g~~~~~~~~G~g~~---~~~~gd~v~v~y~~~~~~--g~~~-dss~~-~~~p~~~~~g~~~~i~g~~~~l 94 (457)
T 1kt0_A 22 GEDITSKKDRGVLKIVKRVGNGEE---TPMIGDKVYVHYKGKLSN--GKKF-DSSHD-RNEPFVFSLGKGQVIKAWDIGV 94 (457)
T ss_dssp -----------CEEEC-----------CCCBTCEEEEEEEEEC-------C-BC-------CEEEETTSTTSCHHHHHHH
T ss_pred cccccCCCCCcEEEEEEECCCCCC---CCCCCCEEEEEEEEEECC--CCEE-eccCC-CCCCeEEEeCCcchhhHHHHHH
Confidence 45777 78999999999999974 357899999999999855 9998 55554 5689999999999999999999
Q ss_pred hhcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCCCCCC-CCCchhhhhHHHHH-------------H--
Q 015006 126 RLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKPKDW-TGLSFDGIMDEAEK-------------I-- 189 (414)
Q Consensus 126 ~~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~~~~~-~~~~~~e~~~~a~~-------------~-- 189 (414)
.+|++||++.|+|||.++||..|.++.||++++++|+|+|+++....-. ...-....+..... +
T Consensus 95 ~~m~~Ge~~~~~i~~~~~yg~~g~~~~i~~~~~l~~~v~l~~~~~~~~~~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g 174 (457)
T 1kt0_A 95 ATMKRGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFKGEDLFEDGGIIRRTKRKGEGYSNPNEGATVEIHLEG 174 (457)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEECEETTSSSSEEEEEEECCBCSCCCCTTCEEEEEEEE
T ss_pred hhCCCCCEEEEEEChHHhccccCCCCCCCCCCcEEEEEeeceeecccccCCcceEEEEEecCCCCCCCCCCCEEEEEEEE
Confidence 9999999999999999999999998899999999999999987542100 00000000000000 0
Q ss_pred Hhhhc------ccccc---------ccHHHHHHHHHH----HHhhcc------------cCCCCCh--------------
Q 015006 190 RVTGN------RLFKE---------GKFELAKAKYEK----VLRDFN------------HVNPQDD-------------- 224 (414)
Q Consensus 190 k~~Gn------~~fk~---------g~y~~A~~~Y~~----al~~~~------------~~~p~~~-------------- 224 (414)
+..|. .-|.. ..++.|+..+++ +|.+-+ .+.|...
T Consensus 175 ~~~g~~f~~~~~~f~~g~g~~~~v~~~~e~al~~~~~ge~~~l~i~P~~ay~~~g~~~~~ip~~~~l~y~~~l~~~~~A~ 254 (457)
T 1kt0_A 175 RCGGRMFDCRDVAFTVGEGEDHDIPIGIDKALEKMQREEQCILYLGPRYGFGEAGKPKFGIEPNAELIYEVTLKSFEKAK 254 (457)
T ss_dssp EETTEEEEEEEEEEETTCGGGGTCCHHHHHHHTTCCBTCEEEEEECGGGTTCSSCBGGGTBCTTCCEEEEEEEEEEECCC
T ss_pred EeCCeEEecCceEEEeCCCccccCChHHHHHHHhCCCCCEEEEEECcccccCCCCCcccCCCCCCEEEEEhhhhhcccCc
Confidence 00000 01111 134444444443 211000 0000000
Q ss_pred ---HHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---------------HHHHHHHHHHHHHcCCHH
Q 015006 225 ---EEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH---------------VKGLYRRGMAYMALGEFE 286 (414)
Q Consensus 225 ---~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~---------------~ka~~r~g~a~~~l~~~~ 286 (414)
............++.++|.+++++++|.+|+..|.+||+++|.+ ..+|+++|.||..+|+|+
T Consensus 255 ~~~~~~~~~~~~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~ 334 (457)
T 1kt0_A 255 ESWEMDTKEKLEQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYT 334 (457)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred chhhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHHHHHHHHHHHHHHhcCHH
Confidence 00011223346689999999999999999999999999999998 799999999999999999
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 015006 287 EAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKK 335 (414)
Q Consensus 287 eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (414)
+|+.+|++||+++|++ ..+...+..+...+.+..+ ....+.+.+...
T Consensus 335 ~A~~~~~~al~~~p~~-~~a~~~~g~a~~~~g~~~~-A~~~~~~al~l~ 381 (457)
T 1kt0_A 335 KAVECCDKALGLDSAN-EKGLYRRGEAQLLMNEFES-AKGDFEKVLEVN 381 (457)
T ss_dssp HHHHHHHHHHHHSTTC-HHHHHHHHHHHHHTTCHHH-HHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCCcc-HHHHHHHHHHHHHccCHHH-HHHHHHHHHHhC
Confidence 9999999999999998 5677777766655443333 233444444443
No 6
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.97 E-value=8.8e-31 Score=255.87 Aligned_cols=159 Identities=26% Similarity=0.472 Sum_probs=104.6
Q ss_pred CccccCCcCcEEEEEEcCCCcCCCC-CCCCCCCCCeeeEEEEeeEEEeeeeecCCCceEEEEeecccCCCCCCCCCCCCe
Q 015006 1 MGIGTMTREEKAVIYVTSQYLTPSP-LMPVVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSL 79 (414)
Q Consensus 1 ~~~~~m~~Ge~~~~~i~~~~~~g~~-~~~~ip~~~~l~~~vel~~~~~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~ 79 (414)
.||.+|++||++.|+|||++|||.. .++.||||++|+|+|+|++|....|+..|++++|+++++|.|+ .+|..|+.
T Consensus 72 ~~l~gm~~Ge~~~~~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~~~~~~di~~D~~~~k~i~~~G~g~---~~p~~g~~ 148 (356)
T 3jxv_A 72 QGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKW---ENPKDPDE 148 (356)
T ss_dssp ----------------------------------------------CCEEETTSSSSEEEEEEECCBSS---CCCCTTCE
T ss_pred HHHhcCCCCCEEEEEEChHHhCCCCCCCCCcCCCCEEEEEeeEEeeecccccccCceeEEEEEecCccc---CCCCCCCE
Confidence 3789999999999999999999985 4579999999999999999999999999999999999999996 35789999
Q ss_pred EEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCC-----CCC
Q 015006 80 LCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPA-----NVP 154 (414)
Q Consensus 80 v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~-----~ip 154 (414)
|+|||+|++.| |++|+++ .++.|.+|++.+++||+.+|.+|++||++.|+|+|+|+||+.|.++ .||
T Consensus 149 V~v~y~g~l~d--gt~~~~~------~~~~f~~g~~~v~~gl~~~l~~m~~GE~~~~~v~p~~~yg~~G~~~~~~~~~ip 220 (356)
T 3jxv_A 149 VFVKYEARLED--GTVVSKS------EGVEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVP 220 (356)
T ss_dssp EEEEEEEEETT--SCEEEEE------EEEEEEGGGCSSSHHHHHHHTTCCBTCEEEEEECGGGTTTTTCBCCCC--CCBC
T ss_pred EEEEEEEEECC--CCEEecc------CCEEEEeCCCCcchHHHHHHhhCCCCCEEEEEEChHhhcCCCCCCcccccccCC
Confidence 99999999976 9998554 2799999999999999999999999999999999999999998764 599
Q ss_pred CCcceEEEEEEcccCC
Q 015006 155 EGAHIQWEIELLGFEK 170 (414)
Q Consensus 155 ~~~~l~~eieL~~~~~ 170 (414)
++++|.|+|+|+++..
T Consensus 221 ~~~~l~~~vel~~~~~ 236 (356)
T 3jxv_A 221 PNASLVIDLELVSWKT 236 (356)
T ss_dssp TTCCEEEEEEEEEEEC
T ss_pred CCcEEEEEEEEEEEec
Confidence 9999999999999865
No 7
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.97 E-value=8.8e-30 Score=239.79 Aligned_cols=160 Identities=31% Similarity=0.480 Sum_probs=143.1
Q ss_pred ccccCCcCcEEEEEEcCCCcCCC-CCCCCCCCCCeeeEEEEeeEEEeeeeec--CCCceEEEEeecccCCCCCCCCCCCC
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPS-PLMPVVEGCEEVHFEVELVHLIQVRDML--GDGRLIKRRIRDGKGEFPMDCPLHDS 78 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~-~~~~~ip~~~~l~~~vel~~~~~~~dv~--~dg~~~k~i~~~G~g~~~~~~p~~~~ 78 (414)
||.+|++||++.|+|||++|||. +.++.||+|++|+|+|+|+++.. .++. +|++++++++++|.|.. .|..|+
T Consensus 113 aL~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~-~~~~~~~d~gl~~~il~~G~G~~---~~~~gd 188 (280)
T 1q1c_A 113 AIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG-EDLTEEEDGGIIRRIQTRGEGYA---KPNEGA 188 (280)
T ss_dssp HHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-EECCTTCSSSEEEEEEECCSCSC---CCCTTC
T ss_pred HHhcCCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc-cccccccccceeEEeeecccccc---cccCCc
Confidence 78999999999999999999998 44688999999999999999975 5888 89999999999999973 357899
Q ss_pred eEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCC---chHHHHHHhhhcCCCCeEEEEecCCCccccCCCCC-CCC
Q 015006 79 LLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGL---VPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPA-NVP 154 (414)
Q Consensus 79 ~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~---v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~-~ip 154 (414)
.|+|||+|++ + |++| ++ .|+.|.+|.|. +++||+.+|.+|++||++.|+|||+++||..+.+. .||
T Consensus 189 ~V~i~y~g~~-d--G~~f-d~------~~~~f~lG~g~~~~~i~G~e~~l~gmk~Ge~~~v~ip~~~~yG~~~~~~~~IP 258 (280)
T 1q1c_A 189 IVEVALEGYY-K--DKLF-DQ------RELRFEIGEGENLDLPYGLERAIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIP 258 (280)
T ss_dssp EEEEEEEEEE-T--TEEE-EE------EEEEEETTCGGGGTCCHHHHHHHTTCCTTCEEEEEECGGGTTTTTCBGGGTBC
T ss_pred eEEEEEEEEe-C--CEEE-ec------CCeEEEecCCcccccchhHHHHHhCCCCCcEEEEEEChhHcCCcCCCccCccC
Confidence 9999999997 4 8888 43 38999999998 59999999999999999999999999999988664 599
Q ss_pred CCcceEEEEEEcccCCCCCCC
Q 015006 155 EGAHIQWEIELLGFEKPKDWT 175 (414)
Q Consensus 155 ~~~~l~~eieL~~~~~~~~~~ 175 (414)
+|++++|+|+|+++...++.|
T Consensus 259 ~~~~l~f~V~L~~i~~~~~~W 279 (280)
T 1q1c_A 259 PNAELKYELHLKSFEKAKESW 279 (280)
T ss_dssp TTCCEEEEEEEEEEECCCC--
T ss_pred CCCeEEEEEEEEEEeCCCCCC
Confidence 999999999999999888766
No 8
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.90 E-value=2.5e-23 Score=176.57 Aligned_cols=116 Identities=38% Similarity=0.604 Sum_probs=105.0
Q ss_pred eeeeec--CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHH
Q 015006 47 QVRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMC 124 (414)
Q Consensus 47 ~~~dv~--~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~ 124 (414)
+.+||+ .|++|+++++++|.|.. .|..|+.|+|||+|++.| |++| +++++ ++.|+.|.+|.+.+++||+.+
T Consensus 25 ~~~di~~~~d~gv~~~i~~~G~G~~---~p~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~~i~G~e~~ 97 (144)
T 3o5e_A 25 QGEDITSKKDRGVLKIVKRVGNGEE---TPMIGDKVYVHYKGKLSN--GKKF-DSSHD-RNEPFVFSLGKGQVIKAWDIG 97 (144)
T ss_dssp HCEECCSSCSSSEEEEEEECCBSSC---CCCTTCEEEEEEEEECTT--SCEE-EESGG-GTSCEEEETTSSSSCHHHHHH
T ss_pred ccccccccCCCeEEEEEEECCCCCc---cCCCCCEEEEEEEEEECC--CCEE-Eeecc-cCCCeEEEeCCCcccHHHHHH
Confidence 457888 89999999999999962 357999999999999865 8998 55544 478999999999999999999
Q ss_pred hhhcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccC
Q 015006 125 VRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 125 l~~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~ 169 (414)
|.+|++||++.|.|||+++||..+.++.||++++|+|+|+|+++.
T Consensus 98 l~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 98 VATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp HTTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred HhCCCCCCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 999999999999999999999999988999999999999999875
No 9
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.90 E-value=9.4e-24 Score=181.29 Aligned_cols=119 Identities=24% Similarity=0.369 Sum_probs=98.2
Q ss_pred CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCC
Q 015006 53 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 132 (414)
Q Consensus 53 ~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE 132 (414)
.+.+|.|+|+++|+|..|. +..|++|+|||+|++.|++|++| ||+++ +++|++|.||.++||+||+.+|.+|++||
T Consensus 8 ~~~Gv~~~vl~~G~G~~p~--~~~G~~V~vhY~g~l~d~~G~~F-DsS~~-rg~P~~f~lG~g~vI~Gwd~gl~~M~~Ge 83 (165)
T 2lkn_A 8 REDGIQKRVIQEGRGELPD--FQDGTKATFHYRTLHSDDEGTVL-DDSRA-RGKPMELIIGKKFKLPVWETIVCTMREGE 83 (165)
T ss_dssp HTTSCCCCEEECCSSCCCC--CCTTCEEEEECEEECSSSSCCEE-EESTT-TTCCEEEESSSSCSCSHHHHHHTTCCTTC
T ss_pred cCCCeEEEEEECCcCCCCC--CCCCCEEEEEEEEEEeCCCccEE-Eeccc-CCCCEEEEecCCCccHHHHHHHhcCccCc
Confidence 4567999999999997652 24799999999999987779998 66666 68999999999999999999999999999
Q ss_pred eEEEEecCCCcccc--------CCCCCC-----------------------------CCCCcceEEEEEEcccCCCCCCC
Q 015006 133 IALVTCPPDYAYDK--------FLRPAN-----------------------------VPEGAHIQWEIELLGFEKPKDWT 175 (414)
Q Consensus 133 ~~~v~i~~~~~yg~--------~~~~~~-----------------------------ip~~~~l~~eieL~~~~~~~~~~ 175 (414)
++.|+|||++|||. ...... |++..+|+|+|||++|+.+.++.
T Consensus 84 ~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~eye 163 (165)
T 2lkn_A 84 IAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPGTYQ 163 (165)
T ss_dssp EEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTTTCC
T ss_pred eEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCcccc
Confidence 99999999999982 000111 23346799999999999877653
No 10
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.89 E-value=7.4e-23 Score=179.90 Aligned_cols=125 Identities=28% Similarity=0.439 Sum_probs=100.3
Q ss_pred CceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCC-CchHHHHHHhhhcCCCCe
Q 015006 55 GRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGEI 133 (414)
Q Consensus 55 g~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~-~v~~gle~~l~~M~~GE~ 133 (414)
++|.++++++|.|..| ..|+.|+|||+|++.+ +|++| ++++. ++.|+.|.+|.+ .+++||+.+|.+|++||+
T Consensus 49 ~gl~~~vl~~G~G~~~----~~Gd~V~v~Y~g~l~~-dG~~f-dss~~-~~~p~~f~lG~g~~vi~G~eeaL~gMk~Ge~ 121 (180)
T 2f4e_A 49 EKVSKQIIKEGHGSKP----SKYSTCFLHYRAWTKN-SQHKF-EDTWH-EQQPIELVLGKEKKELAGLAIGVASMKSGER 121 (180)
T ss_dssp TTEEEEEEECCBSCCB----CTTCEEEEEEEEEETT-TCCEE-EETTT-TTCCEEEETTSCCGGGHHHHHHHTTCCBTCE
T ss_pred CceEEEEEeCCCCCCC----CCCCEEEEEEEEEECC-CCcEE-eccCc-cCCCEEEEeCCCCchhHHHHHHHhCCCCCCE
Confidence 4799999999999744 6899999999999874 48888 55554 478999999999 999999999999999999
Q ss_pred EEEEecCCCccccCCC--CCCCCCCcceEEEEEEcccCCCCC---CCCCchhhhhHHH
Q 015006 134 ALVTCPPDYAYDKFLR--PANVPEGAHIQWEIELLGFEKPKD---WTGLSFDGIMDEA 186 (414)
Q Consensus 134 ~~v~i~~~~~yg~~~~--~~~ip~~~~l~~eieL~~~~~~~~---~~~~~~~e~~~~a 186 (414)
+.|.|||+++||..+. ++.||+|++|+|+|+|+++....+ .|.|+.+|++..|
T Consensus 122 ~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~~e~~~~~~mt~eErl~~A 179 (180)
T 2f4e_A 122 ALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDETKEGKARSDMTVEERIGAA 179 (180)
T ss_dssp EEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCBCCC---------------
T ss_pred EEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecCccccccccCCHHHHHhhc
Confidence 9999999999999886 467999999999999999988777 8999999998876
No 11
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.88 E-value=1.6e-22 Score=168.25 Aligned_cols=115 Identities=37% Similarity=0.602 Sum_probs=103.2
Q ss_pred eeeec--CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHh
Q 015006 48 VRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCV 125 (414)
Q Consensus 48 ~~dv~--~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l 125 (414)
.+||+ .|++++++++++|+|.. .|..|+.|+|||++++.| |++| +++++ ++.|+.|.+|.+.+++||+.+|
T Consensus 10 ~~di~~~~d~gv~~~i~~~G~G~~---~p~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~~i~G~e~~l 82 (128)
T 3o5q_A 10 GEDITSKKDRGVLKIVKRVGNGEE---TPMIGDKVYVHYKGKLSN--GKKF-DSSHD-RNEPFVFSLGKGQVIKAWDIGV 82 (128)
T ss_dssp CEECCSSCSSSEEEEEEECCSSSC---CCCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTSSSSCHHHHHHH
T ss_pred cceecccCCCCEEEEEEECCCCCc---cCCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEECCCCccHHHHHHH
Confidence 46777 88999999999999962 357999999999999865 8998 55543 4679999999999999999999
Q ss_pred hhcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccC
Q 015006 126 RLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 126 ~~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~ 169 (414)
.+|++||++.|.|||+++||..+.++.||++++|+|+|+|+++.
T Consensus 83 ~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 83 ATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp TTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred hcCCCCCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 99999999999999999999999888999999999999999875
No 12
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.88 E-value=7.3e-23 Score=171.65 Aligned_cols=116 Identities=31% Similarity=0.503 Sum_probs=98.5
Q ss_pred eeeeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhh
Q 015006 47 QVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 126 (414)
Q Consensus 47 ~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~ 126 (414)
++.||+.+++|.++++++|.|..+ ..|+.|+|||+|++.+ +|++| +++.. +++|++|.+|.+.+++||+.+|.
T Consensus 18 ~~~~v~~~~gl~~~vl~~G~g~~~----~~gd~V~v~Y~g~l~~-~G~~f-dss~~-~~~p~~f~lG~g~~i~G~e~aL~ 90 (134)
T 3b7x_A 18 RMLDISGDRGVLKDVIREGAGDLV----APDASVLVKYSGYLEH-MDRPF-DSNYF-RKTPRLMKLGEDITLWGMELGLL 90 (134)
T ss_dssp TCEESSSSSSEEEEEEECCEEEEC----CTTCEEEEEEEEECTT-CSSCS-EEC--------CEEC-CCCCCHHHHHHHH
T ss_pred ccceeeCCCCEEEEEEEcCCCCCC----CCCCEEEEEEEEEECC-CCeEE-EecCC-CCCCEEEEcCCcchhHHHHHHHh
Confidence 467999999999999999999754 4799999999999864 48888 55543 46799999999999999999999
Q ss_pred hcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccC
Q 015006 127 LMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 127 ~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~ 169 (414)
+|++||++.|+|||++|||..+.++.||+|++|+|+|+|+++.
T Consensus 91 gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 91 SMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp TCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred CCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 9999999999999999999999888899999999999999874
No 13
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=99.88 E-value=2.5e-22 Score=173.12 Aligned_cols=154 Identities=22% Similarity=0.412 Sum_probs=129.4
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccC----CCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHH
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV----NPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKS 254 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~----~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A 254 (414)
.+++++.+..+++.|+.+|+.|+|..|+..|.+|+..+... .|.+ ++...+......+|+|+|.||+++|+|.+|
T Consensus 4 ~~e~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~nla~~~~~~~~~~~A 82 (162)
T 3rkv_A 4 EDDKLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGE-PEWVELDRKNIPLYANMSQCYLNIGDLHEA 82 (162)
T ss_dssp ----CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTS-HHHHHHHHTHHHHHHHHHHHHHHHTCHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCH-HHHHHHHHHHHHHHHHHHHHHHhcCcHHHH
Confidence 46788899999999999999999999999999999965432 2333 334455677788999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015006 255 IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 333 (414)
Q Consensus 255 ~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (414)
+.+|.+||.++|.++++|+++|.+|..+|+|++|+.+|++|++++|++...+...+..+..++++..+++++.|++||+
T Consensus 83 ~~~~~~al~~~p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~p~~~~~~~~~l~~~~~~~~~~~~~~k~~~~~~f~ 161 (162)
T 3rkv_A 83 EETSSEVLKREETNEKALFRRAKARIAAWKLDEAEEDLKLLLRNHPAAASVVAREMKIVTERRAEKKADSRVTYSKMFQ 161 (162)
T ss_dssp HHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHTTSSCC-------
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999999985478999999999999999999999999985
No 14
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.88 E-value=9.4e-22 Score=163.97 Aligned_cols=116 Identities=33% Similarity=0.564 Sum_probs=100.6
Q ss_pred eeecCCCceEEEEeecc-cCCCCCCCCCCCCeEEEEEEEEe-ecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhh
Q 015006 49 RDMLGDGRLIKRRIRDG-KGEFPMDCPLHDSLLCVHYKGML-LNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 126 (414)
Q Consensus 49 ~dv~~dg~~~k~i~~~G-~g~~~~~~p~~~~~v~v~y~g~~-~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~ 126 (414)
.+++.||.++++++++| .|.- ..|..|+.|+|||+|++ .+ |++| +++.. ++.|++|.+|.+.+++||+.+|.
T Consensus 10 ~~~~~~g~~~~~il~~G~~g~g--~~~~~gd~V~v~Y~g~~~~d--G~~f-d~s~~-~~~p~~f~lG~g~~i~g~e~~l~ 83 (129)
T 2vn1_A 10 VELTADGGVIKTILKKGDEGEE--NIPKKGNEVTVHYVGKLEST--GKVF-DSSFD-RNVPFKFHLEQGEVIKGWDICVS 83 (129)
T ss_dssp EECSTTSSEEEEEEECCCCSGG--GSCCTTCEEEEEEEEEETTT--CCEE-EEGGG-TTCCEEEETTSSSSCHHHHHHHT
T ss_pred cEECCCCCEEEEEEeCCCCCCC--CcCCCCCEEEEEEEEEECCC--CeEE-EecCC-CCccEEEEeCCCCcCHHHHHHHh
Confidence 46779999999999977 4421 12468999999999998 44 8998 55543 46899999999999999999999
Q ss_pred hcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCC
Q 015006 127 LMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 170 (414)
Q Consensus 127 ~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~ 170 (414)
+|++||++.|.|||+++||..+.++.||+|++++|+|+|+++..
T Consensus 84 gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 84 SMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp TCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCCEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 99999999999999999999998888999999999999998865
No 15
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.87 E-value=5.7e-22 Score=166.41 Aligned_cols=117 Identities=32% Similarity=0.560 Sum_probs=104.0
Q ss_pred eeeec--CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHh
Q 015006 48 VRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCV 125 (414)
Q Consensus 48 ~~dv~--~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l 125 (414)
+.||+ .+++|.++++++|.|.. .|..|+.|+|||+|++.+ |++| +++.. +++|++|.+|.+.+++||+.+|
T Consensus 5 ~~dv~~~~~~gl~~~~l~~G~g~~---~~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~~~vi~G~e~~l 77 (135)
T 1r9h_A 5 KIDITPKKDGGVLKLIKKEGQGVV---KPTTGTTVKVHYVGTLEN--GTKF-DSSRD-RGDQFSFNLGRGNVIKGWDLGV 77 (135)
T ss_dssp CEECSTTCCSSEEEEEEECCBSSC---CCCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTTTSSCHHHHHHH
T ss_pred ceecccCCCCcEEEEEEEccCCCc---CCCCCCEEEEEEEEEECC--CCEE-EecCc-CCCCEEEEeCCCCccHHHHHHH
Confidence 56888 88999999999999962 357899999999999855 9998 55432 3579999999999999999999
Q ss_pred hhcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCCC
Q 015006 126 RLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKP 171 (414)
Q Consensus 126 ~~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~~ 171 (414)
.+|++||++.|.|||+++||..+.++.||++++++|+|+|+++...
T Consensus 78 ~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 78 ATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp TTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC-
T ss_pred hcCCCCCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeecC
Confidence 9999999999999999999999988899999999999999998653
No 16
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.87 E-value=1.8e-21 Score=159.58 Aligned_cols=113 Identities=27% Similarity=0.368 Sum_probs=100.9
Q ss_pred eeeeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhh
Q 015006 47 QVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 126 (414)
Q Consensus 47 ~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~ 126 (414)
.|.++++||++.++++++|.|.. ..|..|+.|+|||++++.+ |++|+ ++ +|+.|.+|.+.+++||+.+|.
T Consensus 5 ~~~~~~~~g~~~~~vl~~G~G~~--~~~~~gd~V~v~y~g~~~d--G~~~d-s~-----~p~~f~lG~~~~i~g~e~~l~ 74 (118)
T 2awg_A 5 EWLDILGNGLLRKKTLVPGPPGS--SRPVKGQVVTVHLQTSLEN--GTRVQ-EE-----PELVFTLGDCDVIQALDLSVP 74 (118)
T ss_dssp CEEESSSSSSEEEEEEECCCTTC--CCCCTTSEEEEEEEEECTT--SCEEE-EE-----EEEEEETTSSCSCHHHHHHGG
T ss_pred cceEECCCCCEEEEEEEcCCCCC--ccCCCCCEEEEEEEEEECC--CCEEE-CC-----CCEEEEECCCChhHHHHHHHh
Confidence 35789999999999999999962 1357899999999999854 89884 32 589999999999999999999
Q ss_pred hcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccC
Q 015006 127 LMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 127 ~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~ 169 (414)
+|++||++.|.|||+++||..+.++.||++++++|+|+|+++.
T Consensus 75 gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 75 LMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp GSCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred CCCCCCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 9999999999999999999999888899999999999999864
No 17
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.86 E-value=2.3e-21 Score=159.31 Aligned_cols=109 Identities=28% Similarity=0.535 Sum_probs=95.6
Q ss_pred CceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCC------CCCceEEEcCCCCchHHHHHHhhhc
Q 015006 55 GRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDN------DGQPLEFSSGEGLVPEGFEMCVRLM 128 (414)
Q Consensus 55 g~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~------~~~p~~f~lG~~~v~~gle~~l~~M 128 (414)
.++.|+|+++|+|.. .|..|+.|+|||+|++.| |++| ++++.. .++|+.|.+|.+.+++||+.+|.+|
T Consensus 4 ~g~~~~il~~G~g~~---~p~~gd~V~v~Y~g~~~d--G~~f-dss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~gm 77 (119)
T 3kz7_A 4 PKYTKSILKKGDKTN---FPKKGDVVHCWYTGTLPD--GTVF-DTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTM 77 (119)
T ss_dssp CSEEEEEEECCCSSC---CCCTTCEEEEEEEEECTT--SCEE-EECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTTC
T ss_pred CccEEEEEEcCCCCC---cCCCCCEEEEEEEEEECC--CCEE-EeccccccccccCCCCEEEEECCCChhHHHHHHHhCC
Confidence 478999999999952 357999999999999865 9998 454421 1479999999999999999999999
Q ss_pred CCCCeEEEEecCCCccccCCCCC-CCCCCcceEEEEEEcccC
Q 015006 129 LPGEIALVTCPPDYAYDKFLRPA-NVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 129 ~~GE~~~v~i~~~~~yg~~~~~~-~ip~~~~l~~eieL~~~~ 169 (414)
++||++.|.|||++|||..+.++ .||++++|+|+|+|++++
T Consensus 78 ~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 78 SKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp CTTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEEC
T ss_pred CCCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEeC
Confidence 99999999999999999999865 799999999999999863
No 18
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.86 E-value=2.6e-21 Score=165.66 Aligned_cols=115 Identities=27% Similarity=0.352 Sum_probs=101.7
Q ss_pred eeeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhh
Q 015006 48 VRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRL 127 (414)
Q Consensus 48 ~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~ 127 (414)
+.|++.+|.+.++++++|+|.. ..|..||.|+|||+|++.| |++|+ + ++|++|.+|.+.+++||+.+|.+
T Consensus 36 ~~~~~~sG~v~~~vl~~G~G~~--~~p~~gd~V~v~Y~g~l~d--G~~fd-s-----~~p~~f~lG~g~vi~G~eeaL~g 105 (157)
T 2jwx_A 36 WLDILGNGLLRKKTLVPGPPGS--SRPVKGQVVTVHLQTSLEN--GTRVQ-E-----EPELVFTLGDCDVIQALDLSVPL 105 (157)
T ss_dssp CEESSSSSSEEEEEEECCSTTS--CCCCTTEEEEEEEEEECTT--SCEEE-E-----EEEEEEETTTTSSCHHHHHHTTT
T ss_pred cceECCCCCEEEEEEEccCCCc--cCCCCCCEEEEEEEEEECC--CCEee-c-----CCCEEEEeCCCChhHHHHHHHcC
Confidence 4578899999999999999961 1357899999999999865 99984 3 25899999999999999999999
Q ss_pred cCCCCeEEEEecCCCccccCC-CCCCCCCCcceEEEEEEcccCCCC
Q 015006 128 MLPGEIALVTCPPDYAYDKFL-RPANVPEGAHIQWEIELLGFEKPK 172 (414)
Q Consensus 128 M~~GE~~~v~i~~~~~yg~~~-~~~~ip~~~~l~~eieL~~~~~~~ 172 (414)
|++||++.|.|||+++||..+ .++.||+|++|+|+|+|+++....
T Consensus 106 Mk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 106 MDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp SCTTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEECS
T ss_pred CCCCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEccc
Confidence 999999999999999999999 667899999999999999987654
No 19
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.2e-21 Score=164.51 Aligned_cols=123 Identities=26% Similarity=0.319 Sum_probs=107.9
Q ss_pred eeeeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhh
Q 015006 47 QVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVR 126 (414)
Q Consensus 47 ~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~ 126 (414)
.+.++++||.+.++++++|.|.. ..|..|+.|+|||++++.+ |++|+ + +.|+.|.+|.+.+++||+.+|.
T Consensus 9 ~~~~~~~~g~l~~~vl~~G~G~~--~~~~~gd~V~v~Y~g~~~d--G~~fd-s-----~~p~~f~lG~g~~i~G~e~~L~ 78 (135)
T 2d9f_A 9 EWLDILGNGLLRKKTLVPGPPGS--SRPVKGQVVTVHLQTSLEN--GTRVQ-E-----EPELVFTLGDCDVIQALDLSVP 78 (135)
T ss_dssp SCEESSSSSSSEEEEEECCCSSC--CCCCTTSEEEEEEEEEESS--SCEEE-E-----EEEEEEETTSCCSCTTTTTTGG
T ss_pred cCcEECCCCCEEEEEEEcCCCCC--ccCCCCCEEEEEEEEEECC--CCEEe-c-----CCCEEEEeCCCChhHHHHHHHh
Confidence 35688999999999999999961 1357899999999999865 89884 3 2589999999999999999999
Q ss_pred hcCCCCeEEEEecCCCccccCC-CCCCCCCCcceEEEEEEcccCCCCCCCCCch
Q 015006 127 LMLPGEIALVTCPPDYAYDKFL-RPANVPEGAHIQWEIELLGFEKPKDWTGLSF 179 (414)
Q Consensus 127 ~M~~GE~~~v~i~~~~~yg~~~-~~~~ip~~~~l~~eieL~~~~~~~~~~~~~~ 179 (414)
+|++||++.|.|||+++||..+ .++.||+|++|+|+|+|+++....+...++.
T Consensus 79 gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~~~e~~s~ 132 (135)
T 2d9f_A 79 LMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRPDLEMSGP 132 (135)
T ss_dssp GSCTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSCSSSSCCC
T ss_pred CCCCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCCchhhcCc
Confidence 9999999999999999999998 6678999999999999999988777666654
No 20
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.85 E-value=7.1e-21 Score=154.89 Aligned_cols=107 Identities=33% Similarity=0.568 Sum_probs=95.5
Q ss_pred CceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeE
Q 015006 55 GRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIA 134 (414)
Q Consensus 55 g~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~ 134 (414)
.++.++++++|.|.. +|..|+.|+|||++++.| |++| +++.+ +++|+.|.+|.+.+++||+.+|.+|++||++
T Consensus 6 ~g~~~~~~~~G~g~~---~~~~gd~V~v~y~~~~~d--G~~~-d~s~~-~~~p~~f~lG~~~~i~g~e~~l~gm~~Ge~~ 78 (113)
T 1yat_A 6 GNVKIDRISPGDGAT---FPKTGDLVTIHYTGTLEN--GQKF-DSSVD-RGSPFQCNIGVGQVIKGWDVGIPKLSVGEKA 78 (113)
T ss_dssp GGCEEEEEECCCSSC---CCCTTCEEEEEEEEEETT--SCEE-EESTT-TTCCEEEETTSSSSCHHHHHHGGGCCTTCEE
T ss_pred CCeEEEEEECCCCcc---cCCCCCEEEEEEEEEECC--CCEE-EecCC-CCCcEEEEeCCCCccHHHHHHHhCCCCCCEE
Confidence 368999999999974 246899999999999854 8998 55543 4689999999999999999999999999999
Q ss_pred EEEecCCCccccCCCCCCCCCCcceEEEEEEccc
Q 015006 135 LVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 168 (414)
Q Consensus 135 ~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~ 168 (414)
.|.|||.++||..+.++.||+|++++|+|+|+++
T Consensus 79 ~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 79 RLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp EEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred EEEECHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 9999999999999988789999999999999876
No 21
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.85 E-value=5e-21 Score=154.29 Aligned_cols=107 Identities=35% Similarity=0.537 Sum_probs=94.9
Q ss_pred ceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEE
Q 015006 56 RLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIAL 135 (414)
Q Consensus 56 ~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~ 135 (414)
+|.++++++|+|.. +|..||.|+|||++++.| |++| +++.. +++|++|.+|.+.+++||+.+|.+|++||++.
T Consensus 1 Gl~~~~~~~G~g~~---~~~~gd~V~v~y~~~~~d--G~~~-d~s~~-~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~ 73 (107)
T 2ppn_A 1 GVQVETISPGDGRT---FPKRGQTCVVHYTGMLED--GKKF-DSSRD-RNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAK 73 (107)
T ss_dssp CEEEEEEECCCSSC---CCCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTSCCSCHHHHHHHTTCCTTCEEE
T ss_pred CcEEEEEECcCCCc---CCCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEeCCCChHHHHHHHHhCCCCCCEEE
Confidence 57899999999964 246899999999999865 8998 44443 35799999999999999999999999999999
Q ss_pred EEecCCCccccCCCCCCCCCCcceEEEEEEcccC
Q 015006 136 VTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 136 v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~ 169 (414)
|.|||+++||..+.++.||+|++++|+|+|++++
T Consensus 74 ~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 74 LTISPDYAYGATGHPGIIPPHATLVFDVELLKLE 107 (107)
T ss_dssp EEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred EEECHHHccCCCCCCCCcCCCCeEEEEEEEEEeC
Confidence 9999999999998888899999999999998763
No 22
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.84 E-value=1.5e-20 Score=157.04 Aligned_cols=108 Identities=28% Similarity=0.482 Sum_probs=96.4
Q ss_pred CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCC
Q 015006 53 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 132 (414)
Q Consensus 53 ~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE 132 (414)
.+.++.++++++|.|.. |..|+.|+|+|++++.+ |++| +++++ +++|++|.+|.+.+++||+.+|.+|++||
T Consensus 26 ~~~gl~~~~l~~G~G~~----~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~vi~G~eeaL~gmk~Ge 97 (133)
T 2y78_A 26 TESGLKYEDLTEGSGAE----ARAGQTVSVHYTGWLTD--GQKF-DSSKD-RNDPFAFVLGGGMVIKGWDEGVQGMKVGG 97 (133)
T ss_dssp CTTSCEEEEEECCSSCB----CCTTSEEEEEEEEEETT--SCEE-EETTT-TTCCEEEETTSSSSCHHHHHHSTTCBTTC
T ss_pred CCCCEEEEEEEcCCCCC----CCCCCEEEEEEEEEECC--CCEE-eccCc-CCCCEEEEeCCCChhHHHHHHHcCCCCCC
Confidence 45678999999999964 46899999999999854 8988 55543 46899999999999999999999999999
Q ss_pred eEEEEecCCCccccCCCCCCCCCCcceEEEEEEccc
Q 015006 133 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 168 (414)
Q Consensus 133 ~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~ 168 (414)
++.|.|||.++||..+.++.|||+++++|+|+|+++
T Consensus 98 ~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 98 VRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV 133 (133)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred EEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEEEEC
Confidence 999999999999999988789999999999999864
No 23
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.84 E-value=1.4e-20 Score=156.02 Aligned_cols=117 Identities=21% Similarity=0.336 Sum_probs=99.2
Q ss_pred eeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccC-CCCCceEEEcCCCCchHHHHHHhhh
Q 015006 49 RDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVD-NDGQPLEFSSGEGLVPEGFEMCVRL 127 (414)
Q Consensus 49 ~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~-~~~~p~~f~lG~~~v~~gle~~l~~ 127 (414)
..+..+.++.++++++|.+. ...|..|+.|+|||+|++.+ +|++|+ ++.. ..++|++|.+|.+.+++||+.+|.+
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~--g~~~~~gd~V~v~Y~g~~~~-dG~~fd-ss~~~~~~~p~~f~lG~~~~i~G~e~~l~g 81 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFIC--HRKTKGGDLMLVHYEGYLEK-DGSLFH-STHKHNNGQPIWFTLGILEALKGWDQGLKG 81 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCC--SCCCCTTCEEEEEEEEEETT-TCCEEE-EHHHHTTTCCEEEETTSCSSCHHHHHHSTT
T ss_pred ceEECCCCeEEEEEEcCCCC--CCcCCCCCEEEEEEEEEECC-CCcEEE-EcccCCCCcCEEEEeCCCChhHHHHHHHhC
Confidence 34556778999999999832 12357999999999999973 399984 4432 1368999999999999999999999
Q ss_pred cCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCC
Q 015006 128 MLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 170 (414)
Q Consensus 128 M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~ 170 (414)
|++||++.|.|||++|||..+.+ .||++++|+|+|+|+++..
T Consensus 82 m~~Ge~~~~~ip~~~aYG~~g~~-~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 82 MCVGEKRKLIIPPALGYGKEGKG-KIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp CCTTCEEEEEECGGGTTTTTCBT-TBCTTCCEEEEEEEEEEEC
T ss_pred CCCCCEEEEEEChHHhcCCCCCC-CCCCCCeEEEEEEEEEEEc
Confidence 99999999999999999999865 8999999999999999865
No 24
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.84 E-value=1.5e-20 Score=162.66 Aligned_cols=121 Identities=26% Similarity=0.410 Sum_probs=102.2
Q ss_pred CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCC
Q 015006 53 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 132 (414)
Q Consensus 53 ~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE 132 (414)
.+.+|.++++++|+|.. +|..|+.|+|||+|++.| |++| +++.. ++.|++|.+ +.+++||+.+|.+|++||
T Consensus 35 ~~sGl~~~vl~~G~G~~---~~~~gd~V~v~Y~g~l~d--G~~f-dss~~-~g~p~~f~l--g~vI~G~eeaL~gMk~Ge 105 (167)
T 1jvw_A 35 LPSGLVFQRIARGSGKR---APAIDDKCEVHYTGRLRD--GTVF-DSSRE-RGKPTTFRP--NEVIKGWTEALQLMREGD 105 (167)
T ss_dssp CTTSCEEEEEECCCCSB---CCCTTCCEEEEEEEECTT--SCEE-EEHHH-HTSCEEECG--GGSCHHHHHHHTTCCTTC
T ss_pred CCCCEEEEEEEcCCCCc---CCCCCCEEEEEEEEEECC--CCEE-eeccc-cCCCEEEEe--CchhHHHHHHHcCCCCCC
Confidence 35578999999999974 257899999999999865 9998 55543 468999999 479999999999999999
Q ss_pred eEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCCCCCCCCCchhhhhH
Q 015006 133 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEKPKDWTGLSFDGIMD 184 (414)
Q Consensus 133 ~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~~~~~~~~~~~e~~~ 184 (414)
++.|.|||.++||..+.++.||||++|+|+|+|+++.... +.++.+++-+
T Consensus 106 ~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~~~~--~~~~~~e~~~ 155 (167)
T 1jvw_A 106 RWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIKDGG--KGRTAEEVDE 155 (167)
T ss_dssp EEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEGGGC--CSCBHHHHHH
T ss_pred EEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEEcCC--CCCCHHHHHH
Confidence 9999999999999999888899999999999999998543 3456665444
No 25
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.83 E-value=5.3e-20 Score=165.45 Aligned_cols=112 Identities=27% Similarity=0.462 Sum_probs=99.9
Q ss_pred eeecCCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhc
Q 015006 49 RDMLGDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLM 128 (414)
Q Consensus 49 ~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M 128 (414)
..++.+.++.++++++|+|.. |..|+.|+|||+|++.| |++| +++++ .+.|++|.+|.+.+++||+.+|.+|
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~----~~~gd~V~v~Y~g~l~d--G~~f-dss~~-~~~P~~f~lG~g~vi~G~eeaL~gM 169 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAE----ARAGQTVSVHYTGWLTD--GQKF-DSSKD-RNDPFAFVLGGGMVIKGWDEGVQGM 169 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCB----CCTTCEEEEEEEEEETT--SCEE-EESGG-GTCCEEEETTSSSSCHHHHHHHTTC
T ss_pred cccCCCCceEEEEEEcCCCCc----CCCCCEEEEEEEEEECC--CCEE-EEccc-cCCCEEEEeCCCccchhHHHHHhCC
Confidence 345567789999999999975 46899999999999865 9998 55544 4789999999999999999999999
Q ss_pred CCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEccc
Q 015006 129 LPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 168 (414)
Q Consensus 129 ~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~ 168 (414)
++||++.|.|||++|||..+.++.||++++|+|+|+|+++
T Consensus 170 ~~Ge~~~v~Ipp~~aYG~~g~~~~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 170 KVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV 209 (209)
T ss_dssp BTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEC
T ss_pred CCCCEEEEEECcHHhCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 9999999999999999999988889999999999999864
No 26
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.83 E-value=4e-20 Score=153.98 Aligned_cols=103 Identities=34% Similarity=0.544 Sum_probs=91.8
Q ss_pred EEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEe
Q 015006 59 KRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTC 138 (414)
Q Consensus 59 k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i 138 (414)
|+++++|+|.. +|..||.|+|+|+|++.| |++| +++++ +++|+.|.+|.+.+++||+.+|.+|++||++.|.|
T Consensus 28 K~~l~~G~G~~---~~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~vi~G~e~aL~gm~~Ge~~~v~i 100 (130)
T 2lgo_A 28 KKVLTPGDGVT---KPQAGKKVTVHYDGRFPD--GKQF-DSSRS-RGKPFQFTLGAGEVIKGWDQGVATMTLGEKALFTI 100 (130)
T ss_dssp EEEEECCCSSC---CCCTTSEEEEEEEEECTT--SCEE-ECTTT-TTCCEEEETTSTTSCHHHHHHHHHSCTTEEEEEEE
T ss_pred EEEEeccCCCc---cCCCCCEEEEEEEEEECC--CCEE-EccCc-CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEE
Confidence 55999999974 246899999999999854 8988 55544 46899999999999999999999999999999999
Q ss_pred cCCCccccCCCCCCCCCCcceEEEEEEccc
Q 015006 139 PPDYAYDKFLRPANVPEGAHIQWEIELLGF 168 (414)
Q Consensus 139 ~~~~~yg~~~~~~~ip~~~~l~~eieL~~~ 168 (414)
||.++||..+.++.||+|++++|+|+|+++
T Consensus 101 p~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 101 PYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp CTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred CcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 999999999988889999999999999864
No 27
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.83 E-value=7.3e-20 Score=151.69 Aligned_cols=113 Identities=28% Similarity=0.552 Sum_probs=106.8
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.|..++++|+.+|+.|+|.+|+..|++|+. +.|.+ ..+|+|+|.||+++|+|++|+.+|.+||++
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 76 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVK----RDPEN-----------AILYSNRAACLTKLMEFQRALDDCDTCIRL 76 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHhhHHHhhccHHHHHHHHHHHHHh
Confidence 588999999999999999999999999999 67777 679999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
+|+++++|+++|.++..+|++++|+.+|++|++++|+| ..++..|..|
T Consensus 77 ~p~~~~a~~~lg~~~~~~~~~~~A~~~~~~al~l~P~~-~~a~~~l~~~ 124 (126)
T 4gco_A 77 DSKFIKGYIRKAACLVAMREWSKAQRAYEDALQVDPSN-EEAREGVRNC 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCcCC-HHHHHHHHHh
Confidence 99999999999999999999999999999999999998 6787777665
No 28
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=99.82 E-value=2.3e-20 Score=159.70 Aligned_cols=140 Identities=17% Similarity=0.161 Sum_probs=117.8
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH-HHHhhhhhHHHHHHHHHHHHcCCHHHHHHH
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-KVFVGKRNLLHLNVAACLLKLGECRKSIEA 257 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~-~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~ 257 (414)
+-..+..|..++..|+.+|+.|+|++|+..|++||.+.+ .+++.. .........+|+|+|.|+.++|+|++|+.+
T Consensus 4 ~~~~~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p----~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~ 79 (159)
T 2hr2_A 4 PLKEVVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISH----TMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHS 79 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT----TSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCC----CCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHH
Confidence 333466899999999999999999999999999999544 321110 001122345999999999999999999999
Q ss_pred HHHHHHh-------CCCcHHHH----HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHH
Q 015006 258 CNKVLDA-------NPAHVKGL----YRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESK 323 (414)
Q Consensus 258 ~~~al~~-------dp~~~ka~----~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~ 323 (414)
|++||++ +|+++++| ||+|.++..+|++++|+.+|++|++++|++ ..+...+..+++.++++.++
T Consensus 80 ~~kAL~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p~d-~~~~~~~~~~~~~~~~~~~k 155 (159)
T 2hr2_A 80 ADKALHYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIEER-KGETPGKERMMEVAIDRIAQ 155 (159)
T ss_dssp HHHHHHHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHC-CSCCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHHHHHH
Confidence 9999999 99999999 999999999999999999999999999997 67888888888887766654
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.81 E-value=1.5e-19 Score=169.97 Aligned_cols=120 Identities=30% Similarity=0.589 Sum_probs=104.9
Q ss_pred eEEEeeeeec--CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHH
Q 015006 43 VHLIQVRDML--GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEG 120 (414)
Q Consensus 43 ~~~~~~~dv~--~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~g 120 (414)
++| +..||+ .+++|.++++++|.|.. .|..|+.|+|||+|++.| |++| +++.+ ++.|++|.+|.+.+++|
T Consensus 38 ~~~-~~~di~~~~~~gl~~~vl~~G~G~~---~~~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~g~vi~G 109 (280)
T 1q1c_A 38 LPM-EGVDISPKQDEGVLKVIKREGTGTE---MPMIGDRVFVHYTGWLLD--GTKF-DSSLD-RKDKFSFDLGKGEVIKA 109 (280)
T ss_dssp ----CCEECCSSCSSSEEEEEEECCSSSC---CCCTTCEEEEEEEEEETT--SCEE-EESTT-SSSCEEEETTTTSSCHH
T ss_pred cCc-cccccccCCCCceEEEEEeCCCCCc---CCCCCCEEEEEEEEEECC--CCEE-Eeccc-CCCCEEEEECCcChhHH
Confidence 344 356888 88999999999999974 357899999999999855 9998 55543 46899999999999999
Q ss_pred HHHHhhhcCCCCeEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCC
Q 015006 121 FEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 170 (414)
Q Consensus 121 le~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~ 170 (414)
|+.+|.+|++||++.|+|||+++||..+.++.||++++++|+|+|+++..
T Consensus 110 ~e~aL~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ip~~~~lvf~Vel~~i~~ 159 (280)
T 1q1c_A 110 WDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFKG 159 (280)
T ss_dssp HHHHHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred HHHHHhcCCCCCEEEEEECcHHhCCCcCccCCCCCCCcEEEEEEeeeecc
Confidence 99999999999999999999999999998889999999999999998764
No 30
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.81 E-value=8.7e-20 Score=163.81 Aligned_cols=104 Identities=24% Similarity=0.299 Sum_probs=94.0
Q ss_pred CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCC
Q 015006 53 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 132 (414)
Q Consensus 53 ~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE 132 (414)
.+.+|.++++++|+|.. |..|+.|+|||+|++.| |++| |++ +.|++|.+| .+++||+.+|.+|++|+
T Consensus 115 ~~sGl~y~vl~~G~G~~----p~~gd~V~V~Y~g~l~d--G~vf-Dss----~~P~~f~lG--~vI~G~eeaL~gMk~Ge 181 (219)
T 3oe2_A 115 LADGILMTELTPGTGPK----PDANGRVEVRYVGRLPD--GKIF-DQS----TQPQWFRLD--SVISGWTSALQNMPTGA 181 (219)
T ss_dssp CGGGCEEEEEECCCSCC----CCTTSEEEEEEEEECTT--SCEE-EEC----SSCEEEEGG--GSCHHHHHHHTTCCTTC
T ss_pred CCCCeEEEEEecCCCcc----CCCCCEEEEEEEEEECC--CCEe-ecc----CCcEEEEec--chhHHHHHHHhCCCCCC
Confidence 45679999999999964 47899999999999876 9998 444 579999998 79999999999999999
Q ss_pred eEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccC
Q 015006 133 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFE 169 (414)
Q Consensus 133 ~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~ 169 (414)
++.|.|||++|||..+.++.|||+++|+|+|+|+++.
T Consensus 182 k~~v~IPp~lAYG~~g~~~~IPpnstLvFeVeLl~Ik 218 (219)
T 3oe2_A 182 KWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS 218 (219)
T ss_dssp EEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred EEEEEECchhcCCCCCCCCCCCCCCeEEEEEEEEEEe
Confidence 9999999999999999888899999999999999874
No 31
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.80 E-value=2.1e-19 Score=161.35 Aligned_cols=108 Identities=24% Similarity=0.382 Sum_probs=95.5
Q ss_pred CCCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCC
Q 015006 53 GDGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGE 132 (414)
Q Consensus 53 ~dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE 132 (414)
...++.++++++|+|.. |..|+.|+|||+|++.| |++| ++++. ++.|++|.+| .+++||+.+|.+|++|+
T Consensus 104 ~~sGl~y~vl~~G~G~~----p~~gD~V~V~Y~g~l~d--G~vf-dss~~-~g~p~~f~lg--~vI~G~eeaL~gMk~Ge 173 (213)
T 1fd9_A 104 LPSGLQYKVINSGNGVK----PGKSDTVTVEYTGRLID--GTVF-DSTEK-TGKPATFQVS--QVIPGWTEALQLMPAGS 173 (213)
T ss_dssp CTTSCEEEEEECCCSCC----CCTTCEEEEEEEEEETT--SCEE-EEHHH-HCSCEEEEGG--GSCHHHHHHHTTCCTTC
T ss_pred CCCccEEEEEecCCCcc----CCCCCEEEEEEEEEECC--CCEE-eeccc-cCCCEEEEcC--chhhHHHHHHcCCCCCC
Confidence 45578999999999964 46899999999999875 9998 55543 4689999994 79999999999999999
Q ss_pred eEEEEecCCCccccCCCCCCCCCCcceEEEEEEcccCC
Q 015006 133 IALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGFEK 170 (414)
Q Consensus 133 ~~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~~~ 170 (414)
++.|.|||+++||..+.++.||||++|+|+|+|+++..
T Consensus 174 k~~v~IP~~laYG~~g~~~~Ipp~stLiF~VeLl~v~~ 211 (213)
T 1fd9_A 174 TWEIYVPSGLAYGPRSVGGPIGPNETLIFKIHLISVKK 211 (213)
T ss_dssp EEEEEECGGGTTTTCCCSSSCCTTCCEEEEEEEEEEEC
T ss_pred EEEEEECchhccCccCCCCCCCCCCeEEEEEEEEEEEc
Confidence 99999999999999998788999999999999998764
No 32
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=99.80 E-value=1.6e-18 Score=154.14 Aligned_cols=171 Identities=25% Similarity=0.302 Sum_probs=132.5
Q ss_pred EEEEEcccCCCCCCCCCchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChH-----HHHHHhhhhh
Q 015006 161 WEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDE-----EGKVFVGKRN 235 (414)
Q Consensus 161 ~eieL~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~-----e~~~~~~~~~ 235 (414)
....+..++...+.|.++.+++...+..+...|+.++..|+|.+|+..|.+++.. .|.+.+ .......+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~----~~~~~~~~~~~~~~~~~~~~~ 88 (198)
T 2fbn_A 13 GRENLYFQGAKKSIYDYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDF----FIHTEEWDDQILLDKKKNIEI 88 (198)
T ss_dssp ---------CCCSGGGCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT----TTTCTTCCCHHHHHHHHHHHH
T ss_pred hhhhhhhccccCchhhCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH----HhcccccchhhHHHHHHHHHH
Confidence 3445566788888999999999999999999999999999999999999999994 343320 1111233446
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
.++.|+|.|++++++|++|+.+|.+++.++|.++++++++|.++..+|++++|+..|+++++++|++ ..+...+..+..
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~ 167 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLKIDKNNVKALYKLGVANMYFGFLEEAKENLYKAASLNPNN-LDIRNSYELCVN 167 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-HHHHHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999999999999999999999998 789999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCC
Q 015006 316 QRQEVESKARKQFKGLFDKKP 336 (414)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~ 336 (414)
.+.+..+..+..++++|....
T Consensus 168 ~~~~~~~~~~~~~~~~f~~~~ 188 (198)
T 2fbn_A 168 KLKEARKKDKLTFGGMFDKGP 188 (198)
T ss_dssp HHHHHHC--------------
T ss_pred HHHHHHHHHHHHHHHHhcccc
Confidence 998888888889999998654
No 33
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.79 E-value=2e-19 Score=149.66 Aligned_cols=107 Identities=30% Similarity=0.450 Sum_probs=93.8
Q ss_pred CCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhh------
Q 015006 54 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRL------ 127 (414)
Q Consensus 54 dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~------ 127 (414)
+.+|.++++++|.|..+ ..|+.|+|||++++.+ |++| ++++. +++|++|.+|.+.+++||+.+|.+
T Consensus 11 ~~Gl~~~~l~~G~G~~~----~~gd~V~v~Y~g~~~d--G~~f-dss~~-~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~ 82 (129)
T 1u79_A 11 PSGLAFCDKVVGYGPEA----VKGQLIKAHYVGKLEN--GKVF-DSSYN-RGKPLTFRIGVGEVIKGWDQGILGSDGIPP 82 (129)
T ss_dssp TTSCEEEEEECCSSCBC----CTTCEEEEEEEEECTT--SCEE-EEHHH-HTSCEEEETTSSSSCHHHHHHHHCBTTBCC
T ss_pred CCCeEEEEEEcCCCCCC----CCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEeCCCCccHHHHHHhcccccccc
Confidence 45689999999999644 6899999999999854 8998 55442 367999999999999999999988
Q ss_pred cCCCCeEEEEecCCCccccCCCC-----CCCCCCcceEEEEEEccc
Q 015006 128 MLPGEIALVTCPPDYAYDKFLRP-----ANVPEGAHIQWEIELLGF 168 (414)
Q Consensus 128 M~~GE~~~v~i~~~~~yg~~~~~-----~~ip~~~~l~~eieL~~~ 168 (414)
|++||++.|.|||.++||..+.+ +.||+|++++|+|+|+++
T Consensus 83 m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 83 MLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp CBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred cCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 99999999999999999998863 579999999999999875
No 34
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.78 E-value=9.7e-19 Score=158.14 Aligned_cols=104 Identities=30% Similarity=0.536 Sum_probs=92.6
Q ss_pred CCceEEEEeecccCCCCCCCCCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCe
Q 015006 54 DGRLIKRRIRDGKGEFPMDCPLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEI 133 (414)
Q Consensus 54 dg~~~k~i~~~G~g~~~~~~p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~ 133 (414)
..++.++++++|.|.. |..||.|+|||+|++.| |++| ++++. ++.|++|.+| .+++||+.+|.+|++|++
T Consensus 120 ~sGl~y~vl~~G~G~~----p~~gD~V~V~Y~g~l~d--G~vf-dss~~-~g~p~~f~lg--~vI~G~eeaL~gMk~Gek 189 (224)
T 1q6h_A 120 STGLVYQVVEAGKGEA----PKDSDTVVVNYKGTLID--GKEF-DNSYT-RGEPLSFRLD--GVIPGWTEGLKNIKKGGK 189 (224)
T ss_dssp TTSCEEEEEECCSSCC----CCTTCEEEEEEEEEETT--SCEE-EEGGG-GTSCEEEEGG--GSCHHHHHHGGGSCTTCE
T ss_pred CCceEEEEEecccCcc----ccCCCEEEEEEEEEeCC--CCEE-eeccc-cCCCEEEEcC--CcchhHHHHHcCCCCCCE
Confidence 4578899999999974 46899999999999875 9998 55554 4689999994 799999999999999999
Q ss_pred EEEEecCCCccccCCCCCCCCCCcceEEEEEEccc
Q 015006 134 ALVTCPPDYAYDKFLRPANVPEGAHIQWEIELLGF 168 (414)
Q Consensus 134 ~~v~i~~~~~yg~~~~~~~ip~~~~l~~eieL~~~ 168 (414)
+.|.|||+++||..+.++ ||+|++++|+|+|+++
T Consensus 190 ~~v~IP~~laYG~~g~~~-IPp~stLiF~VeL~~i 223 (224)
T 1q6h_A 190 IKLVIPPELAYGKAGVPG-IPPNSTLVFDVELLDV 223 (224)
T ss_dssp EEEEECGGGTTTTTCBTT-BCTTCCEEEEEEEEEE
T ss_pred EEEEECchhhcCcCCCCC-CCCCCEEEEEEEEEEe
Confidence 999999999999998765 9999999999999976
No 35
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.78 E-value=6.3e-19 Score=140.63 Aligned_cols=94 Identities=31% Similarity=0.543 Sum_probs=84.7
Q ss_pred CCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCCCC
Q 015006 74 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 153 (414)
Q Consensus 74 p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~i 153 (414)
|..||.|+|||++++.+ |++| ++++. +++|++|.+|.+.+++||+.+|.+|++||++.|.|||+++||..+.++.|
T Consensus 6 ~~~gd~V~v~y~~~~~d--G~~~-d~s~~-~~~p~~f~lG~~~~i~g~~~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~I 81 (102)
T 2pbc_A 6 SRKGDVLHMHYTGKLED--GTEF-DSSLP-QNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKI 81 (102)
T ss_dssp CCTTCEEEEEEEEECTT--SCEE-EESTT-TTCCEEEETTSSSSCHHHHTTSTTCCTTCEEEEEECGGGTTTTTCBTTTB
T ss_pred CCCCCEEEEEEEEEECC--CCEE-EeCCC-CCCCEEEEeCCCCccHHHHHHHhCCCCCCEEEEEECHHHCcCCCCCCCCc
Confidence 57899999999999754 9998 55543 46899999999999999999999999999999999999999999888889
Q ss_pred CCCcceEEEEEEcccCCC
Q 015006 154 PEGAHIQWEIELLGFEKP 171 (414)
Q Consensus 154 p~~~~l~~eieL~~~~~~ 171 (414)
|+|++++|+|+|+++...
T Consensus 82 p~~~~l~f~v~l~~v~~~ 99 (102)
T 2pbc_A 82 PGGATLVFEVELLKIERR 99 (102)
T ss_dssp CTTCCEEEEEEEEEEGGG
T ss_pred CcCCeEEEEEEEEEeccc
Confidence 999999999999998653
No 36
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.75 E-value=9.6e-18 Score=164.70 Aligned_cols=156 Identities=26% Similarity=0.480 Sum_probs=132.1
Q ss_pred CchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCC-CCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHH
Q 015006 177 LSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-PQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSI 255 (414)
Q Consensus 177 ~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~-p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~ 255 (414)
.+.++.+..+..++..|+.+++.|+|.+|+..|++|+.++.... ....++..........+|+|+|.||+++++|++|+
T Consensus 214 ~~~~~~~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~ 293 (370)
T 1ihg_A 214 KDVDKILLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAAEDADGAKLQPVALSCVLNIGACKLKMSDWQGAV 293 (370)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhcCccccChHHHHHHHHHHHHHHHHHHHHHHhccCHHHHH
Confidence 35788899999999999999999999999999999998644210 00112222345566789999999999999999999
Q ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015006 256 EACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 333 (414)
Q Consensus 256 ~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (414)
.+|.+||+++|+++++++++|.+|..+|++++|+.+|++|++++|++ ..+...+..+...+.+..++++..+++||+
T Consensus 294 ~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P~~-~~~~~~l~~~~~~~~~~~~a~k~~~~kmf~ 370 (370)
T 1ihg_A 294 DSCLEALEIDPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAPED-KAIQAELLKVKQKIKAQKDKEKAAYAKMFA 370 (370)
T ss_dssp HHHHHHHTTCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHhCchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999998 789999999999999888888888888874
No 37
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.74 E-value=1.4e-17 Score=137.84 Aligned_cols=115 Identities=21% Similarity=0.354 Sum_probs=102.4
Q ss_pred hhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 182 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 261 (414)
Q Consensus 182 ~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~a 261 (414)
..+.|..+++.|+.+|+.|+|.+|+..|++||. +.|.+ ..+|+|+|.||+++|+|++|+.+|.++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~----~~p~~-----------~~~~~nlg~~~~~~~~~~~A~~~~~~a 68 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIE----LDPSN-----------ITFYNNKAAVYFEEKKFAECVQFCEKA 68 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 345788999999999999999999999999999 67777 779999999999999999999999999
Q ss_pred HHhCCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 262 LDANPAH-------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 262 l~~dp~~-------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
|+++|++ +++|+++|.++..+|++++|+..|+++|.++|+ ++....|..+
T Consensus 69 l~~~~~~~~~~~~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~~~~--~~~~~~l~~l 125 (127)
T 4gcn_A 69 VEVGRETRADYKLIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSEFRD--PELVKKVKEL 125 (127)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCC--HHHHHHHHHH
T ss_pred HHhCcccchhhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcC--HHHHHHHHHh
Confidence 9999866 479999999999999999999999999999987 3454444444
No 38
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.71 E-value=9.4e-17 Score=131.67 Aligned_cols=116 Identities=26% Similarity=0.405 Sum_probs=107.6
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|+.+++.|+|.+|+..|.+++. ..|.+ ..+++|+|.|++++|+|++|+.++.+++++
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 67 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPED-----------ARGYSNRAAALAKLMSFPEAIADCNKAIEK 67 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCC-----------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 478899999999999999999999999999 67766 679999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD------KSSEPDATAALSKLKKQ 316 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~------P~n~~~~~~~l~~~~~~ 316 (414)
+|+++.+++++|.++..+|++++|+..|+++++++ |++ ..+...+..+..+
T Consensus 68 ~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~p~~-~~~~~~l~~~~~~ 124 (126)
T 3upv_A 68 DPNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA-REIDQLYYKASQQ 124 (126)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTH-HHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHhCHHHHHHHHHHHHHhCcccCCchhH-HHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999 886 6788777777654
No 39
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.66 E-value=9.3e-16 Score=131.90 Aligned_cols=120 Identities=19% Similarity=0.322 Sum_probs=106.8
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
...+..+...|+.++..|+|.+|+..|.+++. +.|.+ ..+++|+|.||+++++|++|+.++.+++
T Consensus 8 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al 72 (164)
T 3sz7_A 8 TPESDKLKSEGNAAMARKEYSKAIDLYTQALS----IAPAN-----------PIYLSNRAAAYSASGQHEKAAEDAELAT 72 (164)
T ss_dssp CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCcC-----------HHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 34688999999999999999999999999999 56666 6799999999999999999999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHH--HHHHHHHHHHHHH
Q 015006 263 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPD--ATAALSKLKKQRQ 318 (414)
Q Consensus 263 ~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~--~~~~l~~~~~~~~ 318 (414)
+++|+++.+|+++|.++..+|++++|+..|+++++++|++ .. +...+..++.++.
T Consensus 73 ~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~l~~~~~~~~ 129 (164)
T 3sz7_A 73 VVDPKYSKAWSRLGLARFDMADYKGAKEAYEKGIEAEGNG-GSDAMKRGLETTKRKIE 129 (164)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHSSS-CCHHHHHHHHHHHHHHH
T ss_pred HhCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCc-hHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999987 34 4445555544443
No 40
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.64 E-value=2.6e-15 Score=128.33 Aligned_cols=103 Identities=11% Similarity=0.142 Sum_probs=98.3
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..+++.|+|.+|+..|++++. +.|.+ ..+++|+|.|+..+|+|++|+..|.+++++
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~----~~P~~-----------~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l 99 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCI----YDFYN-----------VDYIMGLAAIYQIKEQFQQAADLYAVAFAL 99 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 467788999999999999999999999999 78887 679999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+|+++.+++++|.+|..+|++++|+..|++|+++.|+.
T Consensus 100 ~P~~~~~~~~lg~~~~~lg~~~eA~~~~~~al~l~~~~ 137 (151)
T 3gyz_A 100 GKNDYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDE 137 (151)
T ss_dssp SSSCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCH
T ss_pred CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCH
Confidence 99999999999999999999999999999999999985
No 41
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=99.60 E-value=6.1e-15 Score=121.91 Aligned_cols=120 Identities=26% Similarity=0.418 Sum_probs=107.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|..|+..|.+++. ..|.+ ..+++++|.|++.+++|++|+..+.+++.++
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 73 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLV-----------AVYYTNRALCYLKMQQPEQALADCRRALELD 73 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHh----hCcCc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 67788999999999999999999999999 56666 6799999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC-----CHHHHHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS-----SEPDATAALSKLKKQRQEVE 321 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~-----n~~~~~~~l~~~~~~~~~~~ 321 (414)
|.++.+++++|.++..+|++++|+..|+++++++|+ + ..+...+..+..+.....
T Consensus 74 p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~-~~~~~~l~~~~~~~~~~~ 133 (137)
T 3q49_B 74 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQRLNFG-DDIPSALRIAKKKRWNSI 133 (137)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCCT-THHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHChhHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987 4 567777777766554433
No 42
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.60 E-value=1.1e-14 Score=122.17 Aligned_cols=119 Identities=14% Similarity=0.235 Sum_probs=105.0
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..+++.|+|.+|+..|.+++. ..|.+ ..++.++|.|+.++|+|++|+..+.+++.+
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 81 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCM----LDHYD-----------ARYFLGLGACRQSLGLYEQALQSYSYGALM 81 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 356677899999999999999999999999 67777 678999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 319 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~ 319 (414)
+|+++.+++.+|.++..+|++++|+..|+++++++|++ +........+...+..
T Consensus 82 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~l~~ 135 (142)
T 2xcb_A 82 DINEPRFPFHAAECHLQLGDLDGAESGFYSARALAAAQ-PAHEALAARAGAMLEA 135 (142)
T ss_dssp CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTC-GGGHHHHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987 4455555555544443
No 43
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.60 E-value=8.7e-15 Score=124.35 Aligned_cols=116 Identities=13% Similarity=0.214 Sum_probs=102.5
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++++|.|+..+|+|++|+..|.+++.+
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 84 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCV----LDHYD-----------SRFFLGLGACRQAMGQYDLAIHSYSYGAVM 84 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHH----cCccc-----------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 466778899999999999999999999999 67777 678999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
+|+++.+++++|.++..+|++++|+..|+++++++|++ +........+...
T Consensus 85 ~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~~~ 135 (148)
T 2vgx_A 85 DIXEPRFPFHAAECLLQXGELAEAESGLFLAQELIANX-PEFXELSTRVSSM 135 (148)
T ss_dssp STTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTC-GGGHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCC-CcchHHHHHHHHH
Confidence 99999999999999999999999999999999999987 3343334444333
No 44
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.57 E-value=1.2e-14 Score=123.62 Aligned_cols=112 Identities=14% Similarity=0.102 Sum_probs=85.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|+.+++.|+|++|+..|++++. +.|.+ ..+|.++|.||.++|++++|+.++.++++++
T Consensus 31 ~~~~~~la~~y~~~~~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~ 95 (150)
T 4ga2_A 31 SIKGFYFAKLYYEAKEYDLAKKYICTYIN----VQERD-----------PKAHRFLGLLYELEENTDKAVECYRRSVELN 95 (150)
T ss_dssp HTTHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCchHHHHHHHHHHHHhC
Confidence 33445677888888888888888888888 56766 5678888888888888888888888888888
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHH-HHHHHhhCCCCHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRD-FEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~-~~~al~l~P~n~~~~~~~l~~~ 313 (414)
|+++.+++++|.++..+|++++|... +++|++++|+| +.+...+..+
T Consensus 96 p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l~P~~-~~~~~l~~~l 143 (150)
T 4ga2_A 96 PTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKLFPGS-PAVYKLKEQL 143 (150)
T ss_dssp TTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHSTTC-HHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCcCC-HHHHHHHHHH
Confidence 88888888888888888888776655 47888888887 4554444433
No 45
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.57 E-value=4.7e-15 Score=143.56 Aligned_cols=102 Identities=10% Similarity=0.041 Sum_probs=57.6
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..+.+.|..+++.|+|.+|+..|.++|. +.|.+ ..+|+|+|.||+.+++|++|+.++.++++++|
T Consensus 231 ~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~a~~~~g~~~~A~~~l~~al~l~p 295 (338)
T 2if4_A 231 PCHLNIAACLIKLKRYDEAIGHCNIVLT----EEEKN-----------PKALFRRGKAKAELGQMDSARDDFRKAQKYAP 295 (338)
T ss_dssp HHHHHHHHHHHTTTCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHTTTCHHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCC
Confidence 3678899999999999999999999999 56766 67999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHH-HHcCCHHHHHHHHHHHHhhCCCCH
Q 015006 267 AHVKGLYRRGMAY-MALGEFEEAQRDFEMMMKVDKSSE 303 (414)
Q Consensus 267 ~~~ka~~r~g~a~-~~l~~~~eA~~~~~~al~l~P~n~ 303 (414)
++..++..++.+. ...+..++|...|.+++.+.|++.
T Consensus 296 ~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~~~p~~~ 333 (338)
T 2if4_A 296 DDKAIRRELRALAEQEKALYQKQKEMYKGIFKGKDEGG 333 (338)
T ss_dssp --------------------------------------
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Confidence 9999999999984 455678899999999999999873
No 46
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=99.54 E-value=1.2e-14 Score=123.73 Aligned_cols=112 Identities=11% Similarity=0.054 Sum_probs=96.7
Q ss_pred hhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Q 015006 192 TGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKG 271 (414)
Q Consensus 192 ~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka 271 (414)
.|..+..+|++++|+..|.+++. ..|.+ ...++++|.+|+++|+|++|+.++.++|+++|+++.+
T Consensus 3 LG~~~~~~~~~e~ai~~~~~a~~----~~p~~-----------~~~~~~la~~y~~~~~~~~A~~~~~~al~~~p~~~~a 67 (150)
T 4ga2_A 3 LGSMRRSKADVERYIASVQGSTP----SPRQK-----------SIKGFYFAKLYYEAKEYDLAKKYICTYINVQERDPKA 67 (150)
T ss_dssp ----CCCHHHHHHHHHHHHHHSC----SHHHH-----------HTTHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHH
T ss_pred hHHHHHHcChHHHHHHHHHHhcc----cCccc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHH
Confidence 57888999999999999999998 33322 5578899999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 015006 272 LYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 319 (414)
Q Consensus 272 ~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~ 319 (414)
|+.+|.++..+|++++|+..|++|++++|++ ..+...+..+......
T Consensus 68 ~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~~~~ 114 (150)
T 4ga2_A 68 HRFLGLLYELEENTDKAVECYRRSVELNPTQ-KDLVLKIAELLCKNDV 114 (150)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHcCchHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999998 6788888877655443
No 47
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=99.53 E-value=1.3e-13 Score=109.72 Aligned_cols=114 Identities=26% Similarity=0.461 Sum_probs=104.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.+++.+++|.+|+..+.+++.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 67 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIK----LDPHN-----------HVLYSNRSAAYAKKGDYQKAYEDGCKTVDL 67 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHH----HCCCc-----------HHHHHHHHHHHHhhccHHHHHHHHHHHHHh
Confidence 467788999999999999999999999999 56655 668999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 68 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~ 116 (118)
T 1elw_A 68 KPDWGKGYSRKAAALEFLNRFEEAKRTYEEGLKHEANN-PQLKEGLQNME 116 (118)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHcCCCC-HHHHHHHHHhh
Confidence 99999999999999999999999999999999999998 56766666654
No 48
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=99.52 E-value=6.8e-13 Score=112.62 Aligned_cols=120 Identities=27% Similarity=0.459 Sum_probs=108.5
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHH
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEAC 258 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~ 258 (414)
.......+..+...|..++..|+|..|+..|.+++. ..|.+ ..++.++|.|+..+++|.+|+..+
T Consensus 6 ~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~ 70 (166)
T 1a17_A 6 ADGALKRAEELKTQANDYFKAKDYENAIKFYSQAIE----LNPSN-----------AIYYGNRSLAYLRTECYGYALGDA 70 (166)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCC-----------hHHHHHHHHHHHHcCCHHHHHHHH
Confidence 356677899999999999999999999999999999 55655 678999999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 259 NKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 259 ~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
.+++.++|.++.+++++|.++..+|++++|+..|+++++++|.+ ..+...+..+.
T Consensus 71 ~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~~~~~~ 125 (166)
T 1a17_A 71 TRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD-KDAKMKYQECN 125 (166)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHH
T ss_pred HHHHHhCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998 55665555553
No 49
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.51 E-value=2.2e-13 Score=122.05 Aligned_cols=125 Identities=14% Similarity=0.118 Sum_probs=102.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHH-----HhhhhhHHHHHHHHHHHHcCCHHHHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKV-----FVGKRNLLHLNVAACLLKLGECRKSIEACNK 260 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~-----~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~ 260 (414)
+..+..+|..++..|+|.+|+..|.+++. ..|.+.+-.-. .......+++++|.+|.++|+|++|+..+.+
T Consensus 4 ~~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~ 79 (208)
T 3urz_A 4 VDEMLQKVSAAIEAGQNGQAVSYFRQTIA----LNIDRTEMYYWTNVDKNSEISSKLATELALAYKKNRNYDKAYLFYKE 79 (208)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCHHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 55677889999999999999999999999 45544210000 0011223344499999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 261 VLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 261 al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
+++++|+++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.-
T Consensus 80 al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~-~~a~~~lg~~~~ 133 (208)
T 3urz_A 80 LLQKAPNNVDCLEACAEMQVCRGQEKDALRMYEKILQLEADN-LAANIFLGNYYY 133 (208)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 678878877653
No 50
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.50 E-value=4.6e-13 Score=111.45 Aligned_cols=116 Identities=31% Similarity=0.489 Sum_probs=103.7
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|..|+..|.+++. ..|.+ .....++.++|.|++++++|++|+..+.+++.++
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~--------~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 95 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALG----LDATP--------QDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD 95 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHT----SCCCH--------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH----Hcccc--------hHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC
Confidence 67788999999999999999999999998 55543 1235789999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 96 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~ 143 (148)
T 2dba_A 96 GGDVKALYRRSQALEKLGRLDQAVLDLQRCVSLEPKN-KVFQEALRNIS 143 (148)
T ss_dssp SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCSSC-HHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCc-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 56666666553
No 51
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.49 E-value=3.1e-13 Score=143.31 Aligned_cols=116 Identities=19% Similarity=0.301 Sum_probs=75.8
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+.+.|+.+.+.|+|++|+..|++||+ +.|.+ ..+|+|+|.+|.++|++++|+.++++||++
T Consensus 8 ~a~al~nLG~~~~~~G~~~eAi~~~~kAl~----l~P~~-----------~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l 72 (723)
T 4gyw_A 8 HADSLNNLANIKREQGNIEEAVRLYRKALE----VFPEF-----------AAAHSNLASVLQQQGKLQEALMHYKEAIRI 72 (723)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 467777888888888888888888888888 56665 445666666666666666666666666666
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
+|+++.+|+++|.++..+|++++|++.|++|++++|++ ..+...|..+...
T Consensus 73 ~P~~~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P~~-~~a~~~Lg~~~~~ 123 (723)
T 4gyw_A 73 SPTFADAYSNMGNTLKEMQDVQGALQCYTRAIQINPAF-ADAHSNLASIHKD 123 (723)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 66666666666666666666666666666666666655 4455555554433
No 52
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=99.48 E-value=3.9e-13 Score=109.56 Aligned_cols=114 Identities=25% Similarity=0.470 Sum_probs=103.9
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++..+++|++|+..+.+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 79 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIK----RNPKD-----------AKLYSNRAACYTKLLEFQLALKDCEECIQL 79 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHT----TCTTC-----------HHHHHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCc-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 477888999999999999999999999999 56665 678999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+|.++.+++++|.++..+|++++|+..|+++++++|.+ ..+...+..+.
T Consensus 80 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p~~-~~~~~~l~~~~ 128 (133)
T 2lni_A 80 EPTFIKGYTRKAAALEAMKDYTKAMDVYQKALDLDSSC-KEAADGYQRCM 128 (133)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCGGG-THHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCc-hHHHHHHHHHH
Confidence 99999999999999999999999999999999999987 55666666554
No 53
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=99.48 E-value=1.4e-12 Score=105.45 Aligned_cols=120 Identities=26% Similarity=0.385 Sum_probs=106.9
Q ss_pred hhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHH
Q 015006 181 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNK 260 (414)
Q Consensus 181 e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~ 260 (414)
.....+..+...|..++..|+|..|+..|.+++. ..|.+ ..++.++|.++..+++|++|+..+.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~ 71 (131)
T 2vyi_A 7 EDSAEAERLKTEGNEQMKVENFEAAVHFYGKAIE----LNPAN-----------AVYFCNRAAAYSKLGNYAGAVQDCER 71 (131)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhhhHHHHHHHHHHHHccCHHHHHHHHHHHHH----cCCCC-----------HHHHHHHHHHHHHhhchHHHHHHHHH
Confidence 3445688899999999999999999999999999 45555 56899999999999999999999999
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 261 VLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 261 al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
++.++|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~p~~-~~~~~~l~~~~~~ 126 (131)
T 2vyi_A 72 AICIDPAYSKAYGRMGLALSSLNKHVEAVAYYKKALELDPDN-ETYKSNLKIAELK 126 (131)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHH
T ss_pred HHhcCccCHHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCccc-hHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997 5666666665443
No 54
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.48 E-value=1.3e-13 Score=112.83 Aligned_cols=99 Identities=11% Similarity=0.025 Sum_probs=89.1
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH 268 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~ 268 (414)
+...|..+++.|+|.+|+..|.+++. ..|.+ ..+++++|.|+..+|++.+|+..+.++++++|++
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~ 84 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQ----KEPER-----------EEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD 84 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC
Confidence 45678888999999999999999999 67777 6799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 85 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~P~~ 118 (121)
T 1hxi_A 85 IAVHAALAVSHTNEHNANAALASLRAWLLSQPQY 118 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCC
Confidence 9999999999999999999999999999999986
No 55
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.48 E-value=7.1e-14 Score=112.91 Aligned_cols=82 Identities=16% Similarity=0.282 Sum_probs=70.4
Q ss_pred CCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEec-CCCccccCCCCCC
Q 015006 74 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCP-PDYAYDKFLRPAN 152 (414)
Q Consensus 74 p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~-~~~~yg~~~~~~~ 152 (414)
|..||.|+|+|+|++ | |++| +++ .++|+.|.+|.+.+++||+.+|.+|++||++.|.|+ |.. ||..+.
T Consensus 30 ~~~gD~V~v~Y~g~~-d--G~~f-dss---~~~p~~f~lG~g~vi~G~ee~L~Gmk~Ge~~~v~i~fP~~-Yg~~~~--- 98 (113)
T 1hxv_A 30 LANGDIAIIDFTGIV-D--NKKL-ASA---SAQNYELTIGSNSFIKGFETGLIAMKVNQKKTLALTFPSD-YHVKEL--- 98 (113)
T ss_dssp CCSSEEEEEEEEEEE-T--TEEC-STT---CCSEEEEEETSSCSCTTHHHHHHTSCSSEEEEECCCCCTT-SSSSGG---
T ss_pred CCCCCEEEEEEEEEE-C--CEEc-ccC---CccCEEEEECCCChhHHHHHHHCCCCCCCEEEEEEeCchh-hCcCCC---
Confidence 468999999999997 5 8988 555 367999999999999999999999999999999995 444 776552
Q ss_pred CCCCcceEEEEEEccc
Q 015006 153 VPEGAHIQWEIELLGF 168 (414)
Q Consensus 153 ip~~~~l~~eieL~~~ 168 (414)
+|++++|+|+|+++
T Consensus 99 --~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 99 --QSKPVTFEVVLKAI 112 (113)
T ss_dssp --GSCCCEEEEEECCB
T ss_pred --CCCEEEEEEEEEEE
Confidence 57899999999876
No 56
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=99.47 E-value=5.4e-13 Score=108.11 Aligned_cols=118 Identities=23% Similarity=0.380 Sum_probs=105.5
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|..|+..|.+++. ..|.+ ..++.++|.++..+++|++|+..+.+++.+
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 67 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKE----LDPTN-----------MTYITNQAAVYFEKGDYNKCRELCEKAIEV 67 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCCcc-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 467788999999999999999999999999 45555 578999999999999999999999999999
Q ss_pred CCCc-------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 015006 265 NPAH-------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 319 (414)
Q Consensus 265 dp~~-------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~ 319 (414)
.|.+ +.+++++|.++..+|++++|+..|++++++.|+ ..+...+..+...+.+
T Consensus 68 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~ 127 (131)
T 1elr_A 68 GRENREDYRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAEHRT--PDVLKKCQQAEKILKE 127 (131)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCC--HHHHHHHHHHHHHHHH
Confidence 9877 999999999999999999999999999999994 5677777777665543
No 57
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=99.47 E-value=1.6e-13 Score=116.98 Aligned_cols=105 Identities=20% Similarity=0.259 Sum_probs=92.9
Q ss_pred ccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCH----------HHHHHHHHHHHHhCCC
Q 015006 198 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGEC----------RKSIEACNKVLDANPA 267 (414)
Q Consensus 198 k~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~----------~~A~~~~~~al~~dp~ 267 (414)
+.+.|++|+..|.+++. +.|.+ ..+++|+|.|+..++++ ++|+..|++||+++|+
T Consensus 14 r~~~feeA~~~~~~Ai~----l~P~~-----------aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~ 78 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYK----SNPLD-----------ADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK 78 (158)
T ss_dssp HHHHHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHhHHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC
Confidence 44689999999999999 78888 67999999999999876 4999999999999999
Q ss_pred cHHHHHHHHHHHHHcC-----------CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 268 HVKGLYRRGMAYMALG-----------EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 268 ~~ka~~r~g~a~~~l~-----------~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
++.|||++|.||..+| +|++|+..|++|++++|++ ...+..+..+.+...
T Consensus 79 ~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~-~~y~~al~~~~ka~e 139 (158)
T 1zu2_A 79 KDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDN-THYLKSLEMTAKAPQ 139 (158)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHTHHH
T ss_pred cHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHhCHh
Confidence 9999999999999985 8999999999999999998 667777766654443
No 58
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=99.46 E-value=1e-12 Score=107.20 Aligned_cols=113 Identities=17% Similarity=0.202 Sum_probs=97.8
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH 268 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~ 268 (414)
+...|..++..|+|.+|+..|.+++. ..|.+. ....+++++|.|++++|+|++|+..+.+++..+|++
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~----~~p~~~--------~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~ 72 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLE----LYPNGV--------YTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTH 72 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH----HCSSST--------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTS
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH----HCCCCc--------ccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCC
Confidence 45678889999999999999999999 455541 123688999999999999999999999999999999
Q ss_pred ---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 269 ---VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 269 ---~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+.+++++|.++..+|++++|+..|+++++..|++ ..+...+..+.
T Consensus 73 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~p~~-~~~~~a~~~l~ 120 (129)
T 2xev_A 73 DKAAGGLLKLGLSQYGEGKNTEAQQTLQQVATQYPGS-DAARVAQERLQ 120 (129)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTS-HHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCC-hHHHHHHHHHH
Confidence 8999999999999999999999999999999997 45555444443
No 59
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.46 E-value=1.1e-13 Score=119.23 Aligned_cols=71 Identities=21% Similarity=0.302 Sum_probs=62.7
Q ss_pred CCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCC
Q 015006 74 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 148 (414)
Q Consensus 74 p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~ 148 (414)
+..|+.|+|||+|++.+ |++| |+++. +++|++|.+|.+.+++||+.+|.+|++||++.|.|||++|||...
T Consensus 25 i~~gd~V~v~Y~g~l~d--G~vf-Dss~~-~~~P~~f~lG~g~vipG~eeaL~gm~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 25 VQSNSAVLVHFTLKLDD--GTTA-ESTRN-NGKPALFRLGDASLSEGLEQHLLGLKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp CCTTCEEEEEEEEEETT--SCEE-EEHHH-HTSCEEEETTSSSSCHHHHHHHTTCCTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEEECC--CCEE-EecCC-CCCCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEChHHhcCCCC
Confidence 46899999999999865 9998 55543 358999999999999999999999999999999999999999643
No 60
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.46 E-value=1e-13 Score=133.98 Aligned_cols=206 Identities=12% Similarity=0.105 Sum_probs=140.8
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCC--CCCCCCeeeEEEEeeEEEeeeeecCCCceEEEEeecccCCCCCCCCCCCCe
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMP--VVEGCEEVHFEVELVHLIQVRDMLGDGRLIKRRIRDGKGEFPMDCPLHDSL 79 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~--~ip~~~~l~~~vel~~~~~~~dv~~dg~~~k~i~~~G~g~~~~~~p~~~~~ 79 (414)
||.+|++||++.|.|+|+|+||..+.+ .||+++++.|+++|.++....+.+. +.+.. . |. .
T Consensus 84 al~~~~~Ge~~~l~i~p~~ayg~~g~~~~~i~~~~~l~f~~~L~~~~~A~~~~~------~a~~~----~----p~---~ 146 (336)
T 1p5q_A 84 AIQRMEKGEHSIVYLKPSYAFGSVGKEKFQIPPNAELKYELHLKSFEKAKESWE------MNSEE----K----LE---Q 146 (336)
T ss_dssp HHTTCCTTCEEEEEECTTTTTTTTCBGGGTBCSSCCEEEEEEEEEEECCCCGGG------CCHHH----H----HH---H
T ss_pred HHhcCCCCCeEEEEECCccccCcCCCCccCCCCCCeEEEEEEEeecccccchhc------CCHHH----H----HH---H
Confidence 688999999999999999999986653 6999999999999999864322110 00000 0 00 0
Q ss_pred EEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCC-CchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCCCCCCCcc
Q 015006 80 LCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEG-LVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVPEGAH 158 (414)
Q Consensus 80 v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~-~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~ip~~~~ 158 (414)
+..++ . -|...+ ..|+- ..+..++.++... |.. ..
T Consensus 147 a~~~~-----~-~g~~~~-------------~~g~~~~A~~~y~~Al~~~-----------p~~--------------~~ 182 (336)
T 1p5q_A 147 STIVK-----E-RGTVYF-------------KEGKYKQALLQYKKIVSWL-----------EYE--------------SS 182 (336)
T ss_dssp HHHHH-----H-HHHHHH-------------HHTCHHHHHHHHHHHHHHT-----------TTC--------------CC
T ss_pred HHHHH-----H-HHHHHH-------------HCCCHHHHHHHHHHHHHHh-----------hcc--------------cc
Confidence 00000 0 011111 11211 1333444444321 110 00
Q ss_pred eEEEEEEcccCCCCCCCCCchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHH
Q 015006 159 IQWEIELLGFEKPKDWTGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLH 238 (414)
Q Consensus 159 l~~eieL~~~~~~~~~~~~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~ 238 (414)
+. ......-.-..+..+...|..+++.|+|.+|+..|.+|+. +.|.+ ..++
T Consensus 183 ---------~~-----~~~~~~~~~~~~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~ 233 (336)
T 1p5q_A 183 ---------FS-----NEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALE----LDSNN-----------EKGL 233 (336)
T ss_dssp ---------CC-----SHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHH
T ss_pred ---------CC-----hHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------HHHH
Confidence 00 0000011112367888999999999999999999999999 57766 6799
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHH-HHHHHHHh
Q 015006 239 LNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQ-RDFEMMMK 297 (414)
Q Consensus 239 ~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~-~~~~~al~ 297 (414)
+|+|.||+.+++|++|+.++.++++++|++..+++.+|.++..++++++|. ..|++++.
T Consensus 234 ~~lg~~~~~~g~~~~A~~~~~~al~l~P~~~~a~~~l~~~~~~~~~~~~a~~~~~~~~~~ 293 (336)
T 1p5q_A 234 SRRGEAHLAVNDFELARADFQKVLQLYPNNKAAKTQLAVCQQRIRRQLAREKKLYANMFE 293 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999994 45555553
No 61
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=99.44 E-value=5.4e-13 Score=125.50 Aligned_cols=102 Identities=25% Similarity=0.443 Sum_probs=96.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|+.+++.|+|.+|+..|.+|+. ..|.+ ..+++|+|.||+++|+|++|+.++.++++++
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~al~~~ 68 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAIT----RNPLV-----------AVYYTNRALCYLKMQQPEQALADCRRALELD 68 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 56788999999999999999999999999 56766 6799999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
|+++++++++|.++..+|++++|+..|+++++++|++
T Consensus 69 p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 105 (281)
T 2c2l_A 69 GQSVKAHFFLGQCQLEMESYDEAIANLQRAYSLAKEQ 105 (281)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999865
No 62
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.44 E-value=2e-12 Score=116.61 Aligned_cols=102 Identities=15% Similarity=0.265 Sum_probs=95.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCC-CChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNP-QDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p-~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
+..+...|..++..|+|.+|+..|.+++. ..| .+ ..+++++|.|+.++|+|++|+.++.+++++
T Consensus 7 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~~~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 71 (228)
T 4i17_A 7 PNQLKNEGNDALNAKNYAVAFEKYSEYLK----LTNNQD-----------SVTAYNCGVCADNIKKYKEAADYFDIAIKK 71 (228)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTTTCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHh----ccCCCC-----------cHHHHHHHHHHHHhhcHHHHHHHHHHHHHh
Confidence 36788899999999999999999999999 455 44 468888999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+|.++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 72 ~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~ 109 (228)
T 4i17_A 72 NYNLANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPGN 109 (228)
T ss_dssp TCSHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC
T ss_pred CcchHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc
Confidence 99999999999999999999999999999999999998
No 63
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.43 E-value=1.3e-12 Score=117.82 Aligned_cols=113 Identities=23% Similarity=0.295 Sum_probs=79.0
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..+...|..+++.|+|.+|+..|++++. ..|.+ ..+++++|.++.++|++++|+..+.++++++|
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~P 70 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALK----ENPQD-----------PEALYWLARTQLKLGLVNPALENGKTLVARTP 70 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT----TSSSC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3455677777788888888888888887 66666 45666777777777777777777777777777
Q ss_pred CcHHHHHHHHHHHHHc-----------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMAL-----------GEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l-----------~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
+++.+++.+|.++..+ |++++|+..|+++++++|++ ..+...+..+..
T Consensus 71 ~~~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~P~~-~~~~~~lg~~~~ 129 (217)
T 2pl2_A 71 RYLGGYMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDAERVNPRY-APLHLQRGLVYA 129 (217)
T ss_dssp TCHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHH
Confidence 7777777777777777 77777777777777777766 455555555543
No 64
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=99.42 E-value=1.2e-12 Score=132.59 Aligned_cols=117 Identities=26% Similarity=0.443 Sum_probs=106.9
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
+.+..+...|+.+++.|+|.+|+..|++|+. ..|.+ ..++.|+|.||+++++|++|+.++.+|++
T Consensus 4 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 4 KRAEELKTQANDYFKAKDYENAIKFYSQAIE----LNPSN-----------AIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHHTTSSSSSSSTTTTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 4677888999999999999999999999999 56666 67999999999999999999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 264 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 264 ~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
++|.++.+++++|.+|..+|++++|+..|++|++++|++ ..+...+..+...
T Consensus 69 l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~p~~-~~~~~~l~~~~~~ 120 (477)
T 1wao_1 69 LDKKYIKGYYRRAASNMALGKFRAALRDYETVVKVKPHD-KDAKMKYQECNKI 120 (477)
T ss_dssp SCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTC-TTHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999997 5677777666433
No 65
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=99.42 E-value=9.8e-13 Score=139.49 Aligned_cols=116 Identities=18% Similarity=0.251 Sum_probs=107.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+.+.|+.+++.|+|.+|+..|++|++ +.|.+ ..+|+|+|.++..+|++++|+..+++||+++
T Consensus 43 ~~a~~nLg~~l~~~g~~~eA~~~~~~Al~----l~P~~-----------~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~ 107 (723)
T 4gyw_A 43 AAAHSNLASVLQQQGKLQEALMHYKEAIR----ISPTF-----------ADAYSNMGNTLKEMQDVQGALQCYTRAIQIN 107 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56678899999999999999999999999 67777 6799999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
|+++.+|+++|.+|..+|++++|+..|++|++++|++ ..+...|..+...+
T Consensus 108 P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l~P~~-~~a~~~L~~~l~~~ 158 (723)
T 4gyw_A 108 PAFADAHSNLASIHKDSGNIPEAIASYRTALKLKPDF-PDAYCNLAHCLQIV 158 (723)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHhhhhhHHHhc
Confidence 9999999999999999999999999999999999998 67888887776543
No 66
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=99.40 E-value=5.1e-13 Score=108.07 Aligned_cols=97 Identities=19% Similarity=0.149 Sum_probs=82.1
Q ss_pred ccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH
Q 015006 198 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGM 277 (414)
Q Consensus 198 k~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~ 277 (414)
..|+|.+|+..|.+++. ..+.+ +....++.|+|.||+.+|+|++|+..+.++++++|+++.+++++|.
T Consensus 2 ~~g~~~~A~~~~~~al~----~~~~~--------p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~ 69 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKAIA----SGLQG--------KDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPNHQALRVFYAM 69 (117)
T ss_dssp -----CCCHHHHHHHHS----SCCCH--------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH----cCCCC--------ccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCchHHHHHHHH
Confidence 35889999999999999 43221 1226789999999999999999999999999999999999999999
Q ss_pred HHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 015006 278 AYMALGEFEEAQRDFEMMMKVDKSSEPDAT 307 (414)
Q Consensus 278 a~~~l~~~~eA~~~~~~al~l~P~n~~~~~ 307 (414)
++..+|++++|+..|++++.+.|++ +.+.
T Consensus 70 ~~~~~g~~~~A~~~~~~al~~~p~~-~~~~ 98 (117)
T 3k9i_A 70 VLYNLGRYEQGVELLLKIIAETSDD-ETIQ 98 (117)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHCCC-HHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHhCCCc-HHHH
Confidence 9999999999999999999999998 4443
No 67
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.39 E-value=1.9e-12 Score=127.39 Aligned_cols=115 Identities=8% Similarity=0.037 Sum_probs=91.3
Q ss_pred HHHHHhhhcccccccc-HHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 186 AEKIRVTGNRLFKEGK-FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~-y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
+..+..+|..++..|+ |.+|+..|.+||. +.|.+ ..+|+|+|.++.++|+|.+|+.+|.+||++
T Consensus 131 ~~a~~~~g~~l~~~g~d~~eAl~~~~~al~----l~P~~-----------~~a~~~~g~~~~~~g~~~eAl~~~~kal~l 195 (382)
T 2h6f_A 131 YTVWHFRRVLLKSLQKDLHEEMNYITAIIE----EQPKN-----------YQVWHHRRVLVEWLRDPSQELEFIADILNQ 195 (382)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4455667777777775 7777777777777 56665 668888888888888888888888888888
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
+|.+..+|+++|.++..+|++++|+.+|+++|+++|+| ..+...+..+...
T Consensus 196 dP~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~~-~~a~~~lg~~l~~ 246 (382)
T 2h6f_A 196 DAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRN-NSVWNQRYFVISN 246 (382)
T ss_dssp CTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred CccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 88888888888888888888888888888888888887 5677777666544
No 68
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=99.38 E-value=1.6e-11 Score=98.17 Aligned_cols=113 Identities=27% Similarity=0.490 Sum_probs=101.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|..|+..|.+++. ..|.+ ..++.++|.++...+++++|+..+.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 73 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNN-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALELD 73 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCc-----------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 56677889999999999999999999998 45554 5688999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 74 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~ 121 (125)
T 1na0_A 74 PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAKQNLGNAK 121 (125)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 9999999999999999999999999999999999998 56766666654
No 69
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.37 E-value=1.2e-12 Score=118.20 Aligned_cols=70 Identities=29% Similarity=0.421 Sum_probs=61.1
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccCC------------CCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVDN------------DGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDY 142 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~~------------~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~ 142 (414)
..|+.|+|||+|++ + |++| ||+... .+.|+.|.+|.|.+++||+.+|.+|++||++.|.|||++
T Consensus 3 ~~Gd~V~v~Y~g~l-d--G~vf-Dss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~Gm~vGek~~v~Ippe~ 78 (231)
T 3prb_A 3 EKGKMVKISYDGYV-D--GKLF-DTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (231)
T ss_dssp CTTCEEEEEEEEEE-T--TEEE-EESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHTCCTTCEEEEEECGGG
T ss_pred CCCCEEEEEEEEEE-C--CEEE-EeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcCCCCCCEEEEEeCcHH
Confidence 46899999999998 5 9998 555420 137999999999999999999999999999999999999
Q ss_pred ccccCC
Q 015006 143 AYDKFL 148 (414)
Q Consensus 143 ~yg~~~ 148 (414)
|||..+
T Consensus 79 AYGe~~ 84 (231)
T 3prb_A 79 AFGKRD 84 (231)
T ss_dssp TTCCCC
T ss_pred hcCCCC
Confidence 999754
No 70
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=99.37 E-value=3.1e-12 Score=125.85 Aligned_cols=118 Identities=9% Similarity=0.019 Sum_probs=108.3
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCC-HHHHHHHHHHHHH
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGE-CRKSIEACNKVLD 263 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~-~~~A~~~~~~al~ 263 (414)
.+..+...|..+++.|+|.+|+..|.++|. +.|.+ ..+|+|+|.++..+|+ |++|+.++.++|.
T Consensus 96 ~~~a~~~lg~~~~~~g~~~~Al~~~~~al~----l~P~~-----------~~a~~~~g~~l~~~g~d~~eAl~~~~~al~ 160 (382)
T 2h6f_A 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIE----LNAAN-----------YTVWHFRRVLLKSLQKDLHEEMNYITAIIE 160 (382)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHCCChHHHHHHHHHHHH----hCccC-----------HHHHHHHHHHHHHcccCHHHHHHHHHHHHH
Confidence 466778899999999999999999999999 78887 7899999999999997 9999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 264 ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 264 ~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
++|++..+|+++|.++..+|++++|+..|++||+++|+| ..+...+..+...+.
T Consensus 161 l~P~~~~a~~~~g~~~~~~g~~~eAl~~~~kal~ldP~~-~~a~~~lg~~~~~~g 214 (382)
T 2h6f_A 161 EQPKNYQVWHHRRVLVEWLRDPSQELEFIADILNQDAKN-YHAWQHRQWVIQEFK 214 (382)
T ss_dssp HCTTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHT
T ss_pred HCCCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCccC-HHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999998 678877777765544
No 71
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=99.36 E-value=8e-12 Score=111.80 Aligned_cols=107 Identities=16% Similarity=0.186 Sum_probs=92.4
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK 270 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~k 270 (414)
..|..+++.|+|.+|+..|.+++. +.|.+ ..+++++|.+++.+|++++|+.++.++++++|+++.
T Consensus 59 ~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~P~~~~ 123 (208)
T 3urz_A 59 ELALAYKKNRNYDKAYLFYKELLQ----KAPNN-----------VDCLEACAEMQVCRGQEKDALRMYEKILQLEADNLA 123 (208)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTCHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCHH
Confidence 489999999999999999999999 67877 679999999999999999999999999999999998
Q ss_pred HHHHHHHHHHH-----------------------------------cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 271 GLYRRGMAYMA-----------------------------------LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 271 a~~r~g~a~~~-----------------------------------l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+++++|.+|.. +|+|++|+.+|++|++++|++ .+...|..+.
T Consensus 124 a~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~l~P~~--~~~~~l~~i~ 200 (208)
T 3urz_A 124 ANIFLGNYYYLTAEQEKKKLETDYKKLSSPTKMQYARYRDGLSKLFTTRYEKARNSLQKVILRFPST--EAQKTLDKIL 200 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTTTSCCH--HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHhCCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCH--HHHHHHHHHH
Confidence 88888877643 356889999999999999974 3555555554
No 72
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=99.36 E-value=7.8e-12 Score=112.66 Aligned_cols=132 Identities=16% Similarity=0.240 Sum_probs=110.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc-----------CCHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-----------GECRKS 254 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl-----------~~~~~A 254 (414)
+..+...|..+++.|++.+|+..|.+++. +.|.+ ..++.|+|.++.++ |++++|
T Consensus 39 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~lg~~~~~~~~~~~~~~~~~g~~~~A 103 (217)
T 2pl2_A 39 PEALYWLARTQLKLGLVNPALENGKTLVA----RTPRY-----------LGGYMVLSEAYVALYRQAEDRERGKGYLEQA 103 (217)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHhhhhhhhhcccccCHHHH
Confidence 45677889999999999999999999999 67877 67899999999999 999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015006 255 IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDK 334 (414)
Q Consensus 255 ~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (414)
+..+.++++++|+++.+++.+|.++..+|++++|+..|++|++++ ++ ..+...+..+.....+..+. ...+.+....
T Consensus 104 ~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-~~-~~~~~~la~~~~~~g~~~~A-~~~~~~al~~ 180 (217)
T 2pl2_A 104 LSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALALE-DT-PEIRSALAELYLSMGRLDEA-LAQYAKALEQ 180 (217)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CC-HHHHHHHHHHHHHHTCHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc-cc-hHHHHHHHHHHHHcCCHHHH-HHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 66 67887888776555443332 4445555444
Q ss_pred C
Q 015006 335 K 335 (414)
Q Consensus 335 ~ 335 (414)
.
T Consensus 181 ~ 181 (217)
T 2pl2_A 181 A 181 (217)
T ss_dssp S
T ss_pred C
Confidence 3
No 73
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.36 E-value=4.4e-12 Score=109.75 Aligned_cols=69 Identities=19% Similarity=0.272 Sum_probs=61.3
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 148 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~ 148 (414)
..|+.|+|+|++++.+ |++| ++++ .++|+.|.+|.+.+++||+.+|.+|++||++.|.|||+.+||..+
T Consensus 4 ~~gd~V~v~Y~g~~~d--G~~f-dss~--~~~P~~f~lG~g~vipG~eeaL~Gm~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 4 AKDLVVSLAYQVRTED--GVLV-DESP--VSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CTTEEEEEEEEEEETT--SCEE-EECC--SSSCEEEETTSCSSCSHHHHHHTTCCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCEEEEEEEEEECC--CCEE-eecc--CCcCEEEEECCCCcchHHHHHHcCCCCCCEEEEEECcHHhcCCCC
Confidence 4789999999999754 9998 5554 347999999999999999999999999999999999999999763
No 74
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=99.35 E-value=5.2e-12 Score=99.36 Aligned_cols=100 Identities=14% Similarity=0.193 Sum_probs=92.7
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~ 267 (414)
.+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.+++.+++|++|+..+.++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~ 72 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQ----LDPEE-----------SKYWLMKGKALYNLERYEEAVDCYNYVINVIED 72 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHH----hCcCC-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcc
Confidence 456778889999999999999999999 45655 568899999999999999999999999999999
Q ss_pred --cHHHHHHHHHHHHHc-CCHHHHHHHHHHHHhhCCCC
Q 015006 268 --HVKGLYRRGMAYMAL-GEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 268 --~~ka~~r~g~a~~~l-~~~~eA~~~~~~al~l~P~n 302 (414)
+..+++.+|.++..+ |++++|++.|++++...|.+
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 110 (112)
T 2kck_A 73 EYNKDVWAAKADALRYIEGKEVEAEIAEARAKLEHHHH 110 (112)
T ss_dssp TTCHHHHHHHHHHHTTCSSCSHHHHHHHHHHGGGCCCC
T ss_pred cchHHHHHHHHHHHHHHhCCHHHHHHHHHHHhhcccCC
Confidence 999999999999999 99999999999999999975
No 75
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.35 E-value=1.4e-11 Score=107.02 Aligned_cols=142 Identities=19% Similarity=0.277 Sum_probs=99.3
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHH-----------------------HHhhhhhHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGK-----------------------VFVGKRNLLHLNVA 242 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~-----------------------~~~~~~~~~~~N~a 242 (414)
+..+...|+.+++.|+|++|+..|+++++ ++|.+.+-.. ........++.++|
T Consensus 5 ~~iy~~lG~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~la~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~ 80 (184)
T 3vtx_A 5 TTIYMDIGDKKRTKGDFDGAIRAYKKVLK----ADPNNVETLLKLGKTYMDIGLPNDAIESLKKFVVLDTTSAEAYYILG 80 (184)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCchhHHHHHHHH
Confidence 56778899999999999999999999999 6776632110 01111234566677
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 322 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~ 322 (414)
.++...+++..|+..+.+++.++|.++.+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+.....+..+
T Consensus 81 ~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~p~~-~~~~~~lg~~~~~~g~~~~ 159 (184)
T 3vtx_A 81 SANFMIDEKQAAIDALQRAIALNTVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIKPGF-IRAYQSIGLAYEGKGLRDE 159 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhcchh-hhHHHHHHHHHHHCCCHHH
Confidence 777777777777777777777777778888888888888888888888888888888877 5677777776655543332
Q ss_pred HHHHHHHhhcc
Q 015006 323 KARKQFKGLFD 333 (414)
Q Consensus 323 ~~~~~~~~~~~ 333 (414)
....+.+.++
T Consensus 160 -A~~~~~~al~ 169 (184)
T 3vtx_A 160 -AVKYFKKALE 169 (184)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHh
Confidence 2334444443
No 76
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.34 E-value=1.7e-12 Score=110.62 Aligned_cols=70 Identities=29% Similarity=0.421 Sum_probs=61.2
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccCC------------CCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVDN------------DGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDY 142 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~~------------~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~ 142 (414)
..|+.|+|||+|++ + |++| |++... .++|++|.+|.+.+++||+.+|.+|++||++.|.|||++
T Consensus 3 ~~Gd~V~v~Y~g~l-d--G~vf-Dss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~gm~~Ge~~~v~Ipp~~ 78 (157)
T 3pr9_A 3 EKGKMVKISYDGYV-D--GKLF-DTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILEMDVGEEREVVLPPEK 78 (157)
T ss_dssp CTTCEEEEEEEEEE-T--TEEE-EESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHHCCTTCEEEEEECGGG
T ss_pred CCCCEEEEEEEEEE-C--CEEE-EeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcCCCCCCEEEEEECcHH
Confidence 46899999999998 5 9998 555420 137999999999999999999999999999999999999
Q ss_pred ccccCC
Q 015006 143 AYDKFL 148 (414)
Q Consensus 143 ~yg~~~ 148 (414)
|||..+
T Consensus 79 aYG~~~ 84 (157)
T 3pr9_A 79 AFGKRD 84 (157)
T ss_dssp TTCCCC
T ss_pred hcCCCC
Confidence 999765
No 77
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=99.32 E-value=2.3e-11 Score=109.59 Aligned_cols=114 Identities=15% Similarity=0.162 Sum_probs=101.6
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~ 267 (414)
.+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.+|..+|+|++|+..+.++++++|+
T Consensus 44 ~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~ 108 (228)
T 4i17_A 44 TAYNCGVCADNIKKYKEAADYFDIAIK----KNYNL-----------ANAYIGKSAAYRDMKNNQEYIATLTEGIKAVPG 108 (228)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----TTCSH-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHhhcHHHHHHHHHHHHH----hCcch-----------HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCC
Confidence 445589999999999999999999998 66665 678999999999999999999999999999999
Q ss_pred cH-------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHHHHHH
Q 015006 268 HV-------KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS--SEPDATAALSKLKKQR 317 (414)
Q Consensus 268 ~~-------ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~--n~~~~~~~l~~~~~~~ 317 (414)
++ .+++++|.++..+|++++|+..|++|++++|+ + ..+...+..+....
T Consensus 109 ~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~-~~~~~~l~~~~~~~ 166 (228)
T 4i17_A 109 NATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDVTSKKWK-TDALYSLGVLFYNN 166 (228)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSSCHHHH-HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhcCCCccc-HHHHHHHHHHHHHH
Confidence 98 77999999999999999999999999999998 7 56776777665433
No 78
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.31 E-value=3.4e-11 Score=114.56 Aligned_cols=122 Identities=22% Similarity=0.401 Sum_probs=106.9
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
......|..+++.|+|.+|+..|.+++. ..|.+. .....++.++|.++.++|++++|+..+.++++++|
T Consensus 235 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~~-------~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 303 (359)
T 3ieg_A 235 NKLIESAEELIRDGRYTDATSKYESVMK----TEPSVA-------EYTVRSKERICHCFSKDEKPVEAIRICSEVLQMEP 303 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSSH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCch-------HHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCc
Confidence 3445668899999999999999999999 455552 23346788999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEV 320 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~ 320 (414)
+++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+...+++.
T Consensus 304 ~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~p~~-~~~~~~l~~~~~~~~~~ 356 (359)
T 3ieg_A 304 DNVNALKDRAEAYLIEEMYDEAIQDYEAAQEHNEND-QQIREGLEKAQRLLKQS 356 (359)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998 67888888887766543
No 79
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.30 E-value=2.5e-11 Score=104.98 Aligned_cols=112 Identities=11% Similarity=0.199 Sum_probs=98.2
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHH-HHHcCCH--HHHHHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAAC-LLKLGEC--RKSIEACNKVL 262 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~-~~kl~~~--~~A~~~~~~al 262 (414)
+..+...|..++..|+|.+|+..|.+++. +.|.+ ..++.++|.+ ++..+++ ++|+..+.+++
T Consensus 44 ~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~l~~~~~~~~~~~A~~~~~~al 108 (177)
T 2e2e_A 44 SEQWALLGEYYLWQNDYSNSLLAYRQALQ----LRGEN-----------AELYAALATVLYYQASQHMTAQTRAMIDKAL 108 (177)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HHCSC-----------HHHHHHHHHHHHHHTTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCCC-----------HHHHHHHHHHHHHhcCCcchHHHHHHHHHHH
Confidence 45677889999999999999999999999 45655 5688999999 8899999 99999999999
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 263 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 263 ~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
.++|.++.+++.+|.++..+|++++|+..|+++++++|++ ......+..+
T Consensus 109 ~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~~~~i 158 (177)
T 2e2e_A 109 ALDSNEITALMLLASDAFMQANYAQAIELWQKVMDLNSPR-INRTQLVESI 158 (177)
T ss_dssp HHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCCTT-SCHHHHHHHH
T ss_pred HhCCCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhhCCCC-ccHHHHHHHH
Confidence 9999999999999999999999999999999999999987 3344333333
No 80
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.30 E-value=1.1e-11 Score=105.25 Aligned_cols=71 Identities=24% Similarity=0.313 Sum_probs=62.5
Q ss_pred CCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCC
Q 015006 74 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 148 (414)
Q Consensus 74 p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~ 148 (414)
+..|+.|++||+|++.. +|++| ++++ .++|+.|.+|.+.+++||+.+|.+|++|+++.|.|||+.+||..+
T Consensus 7 i~~gd~V~v~Y~g~~~~-dG~~f-dss~--~~~p~~f~~G~g~vipg~e~aL~gm~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 7 ESIKQAALIEYEVREQG-SSIVL-DSNI--SKEPLEFIIGTNQIIAGLEKAVLKAQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp TTSCCEEEEEEEEEESS-CSCEE-EEST--TTCCEEEETTCCCSCHHHHHHHTTCCBTCEEEEEECGGGTTCSSC
T ss_pred CCCCCEEEEEEEEEECC-CCCEE-EeCC--CCcCEEEEECCCCccHHHHHHHcCCCCCCEEEEEEecHHHcCCCC
Confidence 35799999999999762 38998 5554 357999999999999999999999999999999999999999865
No 81
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=99.30 E-value=2.1e-11 Score=100.36 Aligned_cols=100 Identities=15% Similarity=0.197 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+..+.|+|.++++.|+|++|+..++++|+++|.++.+|+++|.++..+|++++|+.+|++|++++|++ ..+...+..+.
T Consensus 13 a~~~~~~G~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~-~~a~~~lg~~~ 91 (126)
T 4gco_A 13 AQEEKNKGNEYFKKGDYPTAMRHYNEAVKRDPENAILYSNRAACLTKLMEFQRALDDCDTCIRLDSKF-IKGYIRKAACL 91 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhhhh-hHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999998 67888888887
Q ss_pred HHHHHHHHHHHHHHHhhccCCC
Q 015006 315 KQRQEVESKARKQFKGLFDKKP 336 (414)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~ 336 (414)
..+....+ ....+.+.+...+
T Consensus 92 ~~~~~~~~-A~~~~~~al~l~P 112 (126)
T 4gco_A 92 VAMREWSK-AQRAYEDALQVDP 112 (126)
T ss_dssp HHTTCHHH-HHHHHHHHHHHCT
T ss_pred HHCCCHHH-HHHHHHHHHHHCc
Confidence 66654443 3445555554443
No 82
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.30 E-value=2.4e-12 Score=109.41 Aligned_cols=71 Identities=35% Similarity=0.486 Sum_probs=61.6
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccC------------CCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVD------------NDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDY 142 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~------------~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~ 142 (414)
..|+.|+|||+|++.+ |++| ++++. ....|+.|.+|.|.+++||+.+|.+|++||++.|+|||+.
T Consensus 3 ~~gd~V~v~Y~g~~~d--G~~f-dss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~gm~~Ge~~~v~ipp~~ 79 (151)
T 1ix5_A 3 DKGVKIKVDYIGKLES--GDVF-DTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLDMEVGDEKTVKIPAEK 79 (151)
T ss_dssp CTTCEEEECCEECCTT--SCCC-EESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHTCCTTCCCEEEECTTT
T ss_pred CCCCEEEEEEEEEECC--CCEE-EecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcCCCCCCEEEEEECcHH
Confidence 5799999999999754 9998 55431 1246999999999999999999999999999999999999
Q ss_pred ccccCC
Q 015006 143 AYDKFL 148 (414)
Q Consensus 143 ~yg~~~ 148 (414)
|||..+
T Consensus 80 aYG~~~ 85 (151)
T 1ix5_A 80 AYGNRN 85 (151)
T ss_dssp SSCSCC
T ss_pred HCCCCC
Confidence 999765
No 83
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.29 E-value=3.7e-11 Score=106.65 Aligned_cols=134 Identities=15% Similarity=0.211 Sum_probs=110.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|+.++..|+|.+|+..|.+++. + + ..+++|+|.+++++|+|.+|+..+.+++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a~~------~-~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 5 EAISLWNEGVLAADKKDWKGALDAFSAVQD------P-H-----------SRICFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHTSSS------C-C-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHcC------C-C-----------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 566778899999999999999999999853 1 2 568999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH---------------HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE---------------PDATAALSKLKKQRQEVESKARKQFK 329 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~---------------~~~~~~l~~~~~~~~~~~~~~~~~~~ 329 (414)
+|.++.+++++|.++..+|++++|+..|++++++.|.+. ..+...+..+.....+.. +....+.
T Consensus 67 ~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~-~A~~~~~ 145 (213)
T 1hh8_A 67 DKHLAVAYFQRGMLYYQTEKYDLAIKDLKEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWK-KAEEQLA 145 (213)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHH-HHHHHHH
T ss_pred CccchHHHHHHHHHHHHcccHHHHHHHHHHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHH-HHHHHHH
Confidence 999999999999999999999999999999999998762 156666776665544333 3344555
Q ss_pred hhccCCCC
Q 015006 330 GLFDKKPG 337 (414)
Q Consensus 330 ~~~~~~~~ 337 (414)
+.....+.
T Consensus 146 ~al~~~p~ 153 (213)
T 1hh8_A 146 LATSMKSE 153 (213)
T ss_dssp HHHTTCCS
T ss_pred HHHHcCcc
Confidence 55555443
No 84
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=99.27 E-value=1.1e-10 Score=101.36 Aligned_cols=113 Identities=19% Similarity=0.227 Sum_probs=88.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH-----------------------HHHhhhhhHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-----------------------KVFVGKRNLLHLNVA 242 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~-----------------------~~~~~~~~~~~~N~a 242 (414)
+..+...|..+++.|++.+|+..|.+++. ..|.+..-. ....+....++.++|
T Consensus 39 ~~~~~~la~~~~~~~~~~~a~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~~~~~~~~~~lg 114 (184)
T 3vtx_A 39 VETLLKLGKTYMDIGLPNDAIESLKKFVV----LDTTSAEAYYILGSANFMIDEKQAAIDALQRAIALNTVYADAYYKLG 114 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccchHHHHHHH
Confidence 34455666677777777777777777766 233321110 011122356889999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
.++.++|+|++|+..++++++++|.++.+++++|.+|..+|++++|+..|++|++++|++
T Consensus 115 ~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 174 (184)
T 3vtx_A 115 LVYDSMGEHDKAIEAYEKTISIKPGFIRAYQSIGLAYEGKGLRDEAVKYFKKALEKEEKK 174 (184)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTHHH
T ss_pred HHHHHhCCchhHHHHHHHHHHhcchhhhHHHHHHHHHHHCCCHHHHHHHHHHHHhCCccC
Confidence 999999999999999999999999999999999999999999999999999999999975
No 85
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.27 E-value=1.5e-12 Score=103.13 Aligned_cols=95 Identities=29% Similarity=0.427 Sum_probs=77.3
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|+.++..|+|.+|+..|.+++. ..|.+ ..+++|+|.|++++|+|++|+.++.+++++
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLIT----AQPQN-----------PVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 356677888888888888888888888888 56655 567888888888888888888888888888
Q ss_pred CCCc------HHHHHHHHHHHHHcCCHHHHHHHHHH
Q 015006 265 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEM 294 (414)
Q Consensus 265 dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~ 294 (414)
+|++ ..+++++|.++..+|++++|+..|++
T Consensus 68 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 103 (111)
T 2l6j_A 68 TSTAEHVAIRSKLQYRLELAQGAVGSVQIPVVEVDE 103 (111)
T ss_dssp CSSTTSHHHHHHHHHHHHHHHHHHHCCCCCSSSSSS
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhHhhhHhHHHH
Confidence 8888 88888888888888888777766543
No 86
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=99.27 E-value=5.9e-12 Score=107.36 Aligned_cols=98 Identities=8% Similarity=-0.005 Sum_probs=84.8
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
..+++++|.+++++|+|++|+..|.+++.++|.++.+|+.+|.++..+|+|++|+..|++|++++|++ ..+...+..+.
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P~~-~~~~~~lg~~~ 114 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKND-YTPVFHTGQCQ 114 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSSSC-CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCCCC-cHHHHHHHHHH
Confidence 66899999999999999999999999999999999999999999999999999999999999999998 67888888887
Q ss_pred HHHHHHHHHHHHHHHhhccC
Q 015006 315 KQRQEVESKARKQFKGLFDK 334 (414)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~ 334 (414)
..+.+..+. ...|.+....
T Consensus 115 ~~lg~~~eA-~~~~~~al~l 133 (151)
T 3gyz_A 115 LRLKAPLKA-KECFELVIQH 133 (151)
T ss_dssp HHTTCHHHH-HHHHHHHHHH
T ss_pred HHcCCHHHH-HHHHHHHHHh
Confidence 666544433 4445544443
No 87
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=99.27 E-value=4.6e-11 Score=119.90 Aligned_cols=116 Identities=25% Similarity=0.395 Sum_probs=103.6
Q ss_pred hhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 182 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 261 (414)
Q Consensus 182 ~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~a 261 (414)
+.+.+..+...|+.+++.|+|.+|+..|++++. ..| + ..++.++|.|++++|+|++|+..+.++
T Consensus 2 ~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p-~-----------~~~~~~la~~~~~~g~~~~A~~~~~~a 65 (514)
T 2gw1_A 2 KDKYALALKDKGNQFFRNKKYDDAIKYYNWALE----LKE-D-----------PVFYSNLSACYVSVGDLKKVVEMSTKA 65 (514)
T ss_dssp HHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHH----HCC-C-----------HHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHhccHHHHHHHHHHHHh----cCc-c-----------HHHHHhHHHHHHHHhhHHHHHHHHHHH
Confidence 456799999999999999999999999999999 445 3 568999999999999999999999999
Q ss_pred HHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 262 LDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 262 l~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
++++|+++.+++.+|.++..+|++++|+..|++++.++|.+.......+..+
T Consensus 66 l~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (514)
T 2gw1_A 66 LELKPDYSKVLLRRASANEGLGKFADAMFDLSVLSLNGDFNDASIEPMLERN 117 (514)
T ss_dssp HHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSCCGGGTHHHHHHH
T ss_pred hccChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCccchHHHHHHHH
Confidence 9999999999999999999999999999999999999997654444444433
No 88
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.26 E-value=4.2e-11 Score=108.64 Aligned_cols=111 Identities=26% Similarity=0.410 Sum_probs=85.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++.++|+|++|+..+.++++++
T Consensus 139 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 203 (258)
T 3uq3_A 139 AEEARLEGKEYFTKSDWPNAVKAYTEMIK----RAPED-----------ARGYSNRAAALAKLMSFPEAIADCNKAIEKD 203 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHh----cCccc-----------HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 44566778888888888888888888887 45554 4677888888888888888888888888888
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC------CCCHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD------KSSEPDATAALSK 312 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~------P~n~~~~~~~l~~ 312 (414)
|+++.+++.+|.++..+|++++|+..|+++++++ |++ ..+...+..
T Consensus 204 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~p~~-~~~~~~l~~ 255 (258)
T 3uq3_A 204 PNFVRAYIRKATAQIAVKEYASALETLDAARTKDAEVNNGSSA-REIDQLYYK 255 (258)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTTTH-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhChhhcCCCch-HHHHHHHHH
Confidence 8888888888888888888888888888888887 765 455555543
No 89
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=99.25 E-value=4.3e-11 Score=106.27 Aligned_cols=102 Identities=9% Similarity=0.094 Sum_probs=94.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++|+|.+++.+|+|++|+.++.+++++.
T Consensus 37 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~~~~-----------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~ 101 (213)
T 1hh8_A 37 SRICFNIGCMYTILKNMTEAEKAFTRSIN----RDKHL-----------AVAYFQRGMLYYQTEKYDLAIKDLKEALIQL 101 (213)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCccc-----------hHHHHHHHHHHHHcccHHHHHHHHHHHHHhC
Confidence 45778899999999999999999999999 45655 6789999999999999999999999999988
Q ss_pred CCcH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 266 PAHV----------------KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 266 p~~~----------------ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
|.+. .+++++|.++..+|++++|+..|+++++++|++
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 154 (213)
T 1hh8_A 102 RGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMKSEP 154 (213)
T ss_dssp TTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSG
T ss_pred CCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcCccc
Confidence 8776 999999999999999999999999999999976
No 90
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.25 E-value=1.6e-10 Score=106.00 Aligned_cols=104 Identities=21% Similarity=0.234 Sum_probs=97.6
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++..+|+|++|+..+.+++++
T Consensus 42 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 106 (275)
T 1xnf_A 42 RAQLLYERGVLYDSLGLRALARNDFSQALA----IRPDM-----------PEVFNYLGIYLTQAGNFDAAYEAFDSVLEL 106 (275)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHH----cCCCc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 467788899999999999999999999999 56665 668999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 303 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~ 303 (414)
+|.++.+++.+|.++..+|++++|+..|+++++++|++.
T Consensus 107 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~~ 145 (275)
T 1xnf_A 107 DPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDDPNDP 145 (275)
T ss_dssp CTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCH
T ss_pred CccccHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999999999999999999999983
No 91
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.24 E-value=2.6e-11 Score=107.05 Aligned_cols=69 Identities=19% Similarity=0.272 Sum_probs=61.5
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFL 148 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~ 148 (414)
..|+.|+|+|++++.+ |++| ++++ ..+|++|.+|.+.+++||+.+|.+|++|+++.|+|||+.+||...
T Consensus 4 ~~gd~V~v~Y~g~~~d--G~~f-dss~--~~~P~~f~lG~g~vipG~eeaL~Gm~vGe~~~v~Ippe~aYGe~~ 72 (196)
T 2kfw_A 4 AKDLVVSLAYQVRTED--GVLV-DESP--VSAPLDYLHGHGSLISGLETALEGHEVGDKFDVAVGANDAYGQYD 72 (196)
T ss_dssp CSSCEEEEEEEEEETT--TEEE-EECC--TTSCCEEESSSSSSCHHHHHHHSSSCTTCEEEEECSTTTTSSCCC
T ss_pred CCCCEEEEEEEEEECC--CCEE-EecC--CCCCEEEEECCCCcchHHHHHHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 4789999999999744 8988 5554 347999999999999999999999999999999999999999765
No 92
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=99.22 E-value=3.1e-10 Score=90.88 Aligned_cols=83 Identities=14% Similarity=0.195 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC
Q 015006 204 LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG 283 (414)
Q Consensus 204 ~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~ 283 (414)
.|+..|.+++. ..|.+ ..+++++|.+++.+|+|++|+..+.+++.++|.++.+++.+|.++..+|
T Consensus 3 ~a~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g 67 (115)
T 2kat_A 3 AITERLEAMLA----QGTDN-----------MLLRFTLGKTYAEHEQFDAALPHLRAALDFDPTYSVAWKWLGKTLQGQG 67 (115)
T ss_dssp CHHHHHHHHHT----TTCCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcC
Confidence 57889999999 67777 6789999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCC
Q 015006 284 EFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 284 ~~~eA~~~~~~al~l~P~ 301 (414)
++++|+..|+++++++|.
T Consensus 68 ~~~~A~~~~~~al~~~~~ 85 (115)
T 2kat_A 68 DRAGARQAWESGLAAAQS 85 (115)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhccc
Confidence 999999999999999884
No 93
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=99.22 E-value=5.5e-11 Score=102.78 Aligned_cols=134 Identities=12% Similarity=0.113 Sum_probs=107.0
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~ 267 (414)
++...++.++..|+|.+|+..|.+++. ..|.+ ..++.++|.+++.+|+|++|+..+.+++.++|.
T Consensus 12 ~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~ 76 (177)
T 2e2e_A 12 RQRDPLHQFASQQNPEAQLQALQDKIR----ANPQN-----------SEQWALLGEYYLWQNDYSNSLLAYRQALQLRGE 76 (177)
T ss_dssp CSSTTTCCCC-----CCCCHHHHHHHH----HCCSC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHCS
T ss_pred HHhhhhhhhhhccCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCC
Confidence 344667888999999999999999999 56666 568999999999999999999999999999999
Q ss_pred cHHHHHHHHHH-HHHcCCH--HHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCC
Q 015006 268 HVKGLYRRGMA-YMALGEF--EEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKPGE 338 (414)
Q Consensus 268 ~~ka~~r~g~a-~~~l~~~--~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (414)
++.+++.+|.+ +...|++ ++|+..|+++++++|++ ..+...+..+........ .....+.+.+...+..
T Consensus 77 ~~~~~~~la~~l~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~la~~~~~~g~~~-~A~~~~~~al~~~p~~ 148 (177)
T 2e2e_A 77 NAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNE-ITALMLLASDAFMQANYA-QAIELWQKVMDLNSPR 148 (177)
T ss_dssp CHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHH-HHHHHHHHHHHTCCTT
T ss_pred CHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHhCCCc-HHHHHHHHHHHHHcccHH-HHHHHHHHHHhhCCCC
Confidence 99999999999 8899999 99999999999999998 667777777765554333 3344566666554443
No 94
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.21 E-value=1.2e-10 Score=117.62 Aligned_cols=119 Identities=10% Similarity=0.055 Sum_probs=106.4
Q ss_pred HHHHhhhcccccc---------ccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc--------C
Q 015006 187 EKIRVTGNRLFKE---------GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL--------G 249 (414)
Q Consensus 187 ~~~k~~Gn~~fk~---------g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl--------~ 249 (414)
..+...|..++.. |+|.+|+..|.+|+. +.|.+ ..+++|+|.+|..+ +
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~~~~~~~~~g 235 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQ----MDVLD-----------GRSWYILGNAYLSLYFNTGQNPK 235 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHHHHhhccccc
Confidence 4566788888888 999999999999999 67776 67899999999999 9
Q ss_pred CHHHHHHHHHHHHHhCC---CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH
Q 015006 250 ECRKSIEACNKVLDANP---AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVE 321 (414)
Q Consensus 250 ~~~~A~~~~~~al~~dp---~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~ 321 (414)
+|++|+..+.++++++| .++.+++++|.+|..+|++++|+..|++|++++|++ ..+...+..+...+.+..
T Consensus 236 ~~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~-~~a~~~l~~~~~~lg~~~ 309 (474)
T 4abn_A 236 ISQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALDPAW-PEPQQREQQLLEFLSRLT 309 (474)
T ss_dssp HHHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHHHHH
Confidence 99999999999999999 999999999999999999999999999999999998 677777777766555433
No 95
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=99.20 E-value=2e-10 Score=118.28 Aligned_cols=116 Identities=14% Similarity=0.090 Sum_probs=106.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|++++. ..|.+ ..++.++|.+|..+|+|++|+..+.++++++
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 87 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLA----LHPGH-----------PEAVARLGRVRWTQQRHAEAAVLLQQASDAA 87 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHT----TSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC
Confidence 55677889999999999999999999999 67776 6789999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
|+++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+....
T Consensus 88 p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~ 138 (568)
T 2vsy_A 88 PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLPEE-PYITAQLLNWRRRL 138 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999998 67777777776655
No 96
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.19 E-value=2e-10 Score=105.73 Aligned_cols=105 Identities=11% Similarity=0.202 Sum_probs=94.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..+++.|+|.+|+..|.+++. ..|.++ ....+++++|.||+++|+|.+|+..+.+++.+.
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~----~~p~~~--------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 82 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFT----YGRTHE--------WAADAQFYLARAYYQNKEYLLAASEYERFIQIY 82 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGG----GCSCST--------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH----hCCCCc--------chHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHC
Confidence 66778899999999999999999999999 555542 235689999999999999999999999999998
Q ss_pred CCc---HHHHHHHHHHHHH--------cCCHHHHHHHHHHHHhhCCCC
Q 015006 266 PAH---VKGLYRRGMAYMA--------LGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 266 p~~---~ka~~r~g~a~~~--------l~~~~eA~~~~~~al~l~P~n 302 (414)
|++ +.++|++|.++.. +|++++|+..|+++++++|++
T Consensus 83 p~~~~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~p~~ 130 (261)
T 3qky_A 83 QIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRYPNH 130 (261)
T ss_dssp TTCTTHHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHCTTC
T ss_pred CCCchhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHCcCc
Confidence 854 7899999999999 999999999999999999987
No 97
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=99.18 E-value=6e-11 Score=100.38 Aligned_cols=110 Identities=9% Similarity=0.046 Sum_probs=89.4
Q ss_pred HHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH
Q 015006 207 AKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFE 286 (414)
Q Consensus 207 ~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~ 286 (414)
..|++++. +.|.+ ..+++++|.+++..|+|.+|+..+.+++.++|.++.+++.+|.++..+|+++
T Consensus 8 ~~~~~al~----~~p~~-----------~~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~ 72 (148)
T 2vgx_A 8 GTIAMLNE----ISSDT-----------LEQLYSLAFNQYQSGXYEDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYD 72 (148)
T ss_dssp CSHHHHTT----CCHHH-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHH
T ss_pred hhHHHHHc----CCHhh-----------HHHHHHHHHHHHHcCChHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHH
Confidence 34667776 45443 6688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015006 287 EAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 333 (414)
Q Consensus 287 eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (414)
+|+..|++|+.++|++ ..+...+..+...+.+..+. ...+.+...
T Consensus 73 ~A~~~~~~al~l~p~~-~~~~~~lg~~~~~~g~~~~A-~~~~~~al~ 117 (148)
T 2vgx_A 73 LAIHSYSYGAVMDIXE-PRFPFHAAECLLQXGELAEA-ESGLFLAQE 117 (148)
T ss_dssp HHHHHHHHHHHHSTTC-THHHHHHHHHHHHTTCHHHH-HHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCC-chHHHHHHHHHHHcCCHHHH-HHHHHHHHH
Confidence 9999999999999998 57777777776555443332 334444443
No 98
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.18 E-value=2e-10 Score=103.81 Aligned_cols=106 Identities=20% Similarity=0.297 Sum_probs=92.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..+++.|+|.+|+..|.+++. ..|.++ ....+++++|.|++++|+|++|+..+.++++.+
T Consensus 4 ~~~~~~~a~~~~~~g~~~~A~~~~~~~~~----~~p~~~--------~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~ 71 (225)
T 2yhc_A 4 PNEIYATAQQKLQDGNWRQAITQLEALDN----RYPFGP--------YSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLN 71 (225)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTST--------THHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCCh--------HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHC
Confidence 45567788999999999999999999998 455442 124589999999999999999999999999999
Q ss_pred CCcHH---HHHHHHHHHHH------------------cCCHHHHHHHHHHHHhhCCCCH
Q 015006 266 PAHVK---GLYRRGMAYMA------------------LGEFEEAQRDFEMMMKVDKSSE 303 (414)
Q Consensus 266 p~~~k---a~~r~g~a~~~------------------l~~~~eA~~~~~~al~l~P~n~ 303 (414)
|++.. |+|++|.++.. +|++++|+..|+++++..|++.
T Consensus 72 P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~P~~~ 130 (225)
T 2yhc_A 72 PTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKLVRGYPNSQ 130 (225)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHHHTTCTTCT
T ss_pred cCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHHHHHCcCCh
Confidence 99875 89999999987 5789999999999999999974
No 99
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.18 E-value=3.5e-10 Score=111.78 Aligned_cols=119 Identities=23% Similarity=0.407 Sum_probs=104.4
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~ 267 (414)
.+...|..++..|+|.+|+..|.+++. ..|.+. .....++.++|.++.++|++++|+..+.+++.++|+
T Consensus 259 ~~~~~~~~~~~~g~~~~A~~~~~~~l~----~~p~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~p~ 327 (450)
T 2y4t_A 259 KLIESAEELIRDGRYTDATSKYESVMK----TEPSIA-------EYTVRSKERICHCFSKDEKPVEAIRVCSEVLQMEPD 327 (450)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH----HCCSSH-------HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCcch-------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCcc
Confidence 345569999999999999999999999 556552 223568999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 268 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 268 ~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 328 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~~ 377 (450)
T 2y4t_A 328 NVNALKDRAEAYLIEEMYDEAIQDYETAQEHNEND-QQIREGLEKAQRLLK 377 (450)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTSSSC-HHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCcch-HHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999998 678878877765544
No 100
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=99.18 E-value=4.6e-10 Score=103.32 Aligned_cols=141 Identities=20% Similarity=0.266 Sum_probs=112.2
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH--------cCCHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK--------LGECRKSIEA 257 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k--------l~~~~~A~~~ 257 (414)
+..+...|..+++.|+|.+|+..|.+++. ..|.++ ....+++++|.|+++ +|++.+|+..
T Consensus 52 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~----~~p~~~--------~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~ 119 (261)
T 3qky_A 52 ADAQFYLARAYYQNKEYLLAASEYERFIQ----IYQIDP--------RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEA 119 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCT--------THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHH----HCCCCc--------hhHHHHHHHHHHHHHhcccccccchhHHHHHHH
Confidence 56677889999999999999999999999 455442 124689999999999 9999999999
Q ss_pred HHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH--HHHHHHHHHHHHHH-
Q 015006 258 CNKVLDANPAHVKGL-----------------YRRGMAYMALGEFEEAQRDFEMMMKVDKSSE--PDATAALSKLKKQR- 317 (414)
Q Consensus 258 ~~~al~~dp~~~ka~-----------------~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~--~~~~~~l~~~~~~~- 317 (414)
+.++++..|++..+. +.+|.+|..+|+|++|+..|+++++..|++. ..+...+..+...+
T Consensus 120 ~~~~l~~~p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g 199 (261)
T 3qky_A 120 FQLFIDRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYA 199 (261)
T ss_dssp HHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhc
Confidence 999999999986666 9999999999999999999999999999852 34555565555443
Q ss_pred --------HHHHHHHHHHHHhhccCCCCC
Q 015006 318 --------QEVESKARKQFKGLFDKKPGE 338 (414)
Q Consensus 318 --------~~~~~~~~~~~~~~~~~~~~~ 338 (414)
...-.+....+++.....+..
T Consensus 200 ~~~~~~~~~~~~~~A~~~~~~~~~~~p~~ 228 (261)
T 3qky_A 200 EQSVRARQPERYRRAVELYERLLQIFPDS 228 (261)
T ss_dssp HTSCGGGHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ccchhhcccchHHHHHHHHHHHHHHCCCC
Confidence 123344456666666665544
No 101
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=99.17 E-value=2.6e-10 Score=115.24 Aligned_cols=115 Identities=13% Similarity=0.117 Sum_probs=105.2
Q ss_pred HHHHHhhhccccccccH-HHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 186 AEKIRVTGNRLFKEGKF-ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y-~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
+..+...|..++..|+| .+|+..|.+|+. +.|.+ ..+++++|.||+++|+|++|+..+.+++++
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~~ 166 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVK----LEPEL-----------VEAWNQLGEVYWKKGDVTSAHTCFSGALTH 166 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHh----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 66788899999999999 999999999999 67766 679999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHc---------CCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMAL---------GEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l---------~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
+|+ ..+++++|.++..+ |++++|+..|++|++++|++ ..+...+..+....
T Consensus 167 ~p~-~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~~~~ 226 (474)
T 4abn_A 167 CKN-KVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMDVLD-GRSWYILGNAYLSL 226 (474)
T ss_dssp CCC-HHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH
T ss_pred CCC-HHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHH
Confidence 998 79999999999999 99999999999999999998 67777777776544
No 102
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.17 E-value=5.6e-10 Score=95.50 Aligned_cols=117 Identities=19% Similarity=0.248 Sum_probs=98.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++...+++++|+..+.+++..+
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 106 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLA----DAPDN-----------VKVATVLGLTYVQVQKYDLAVPLLIKVAEAN 106 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC
Confidence 44566778888888999999999999988 45544 5688899999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
|.++.+++.+|.++..+|++++|+..|++++++.|.+ ..+...+..+.....
T Consensus 107 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~~~ 158 (186)
T 3as5_A 107 PINFNVRFRLGVALDNLGRFDEAIDSFKIALGLRPNE-GKVHRAIAFSYEQMG 158 (186)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTT
T ss_pred cHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcCccc-hHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999987 566666666655443
No 103
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.17 E-value=3.8e-10 Score=91.02 Aligned_cols=113 Identities=25% Similarity=0.431 Sum_probs=98.1
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~ 267 (414)
.+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++...+++++|+..+.+++...|.
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~ 67 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALE----LDPRS-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPR 67 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHH----cCCcc-----------hhHHHHHHHHHHHhcCHHHHHHHHHHHHHHCCC
Confidence 355678888899999999999999998 45544 567889999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 268 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 268 ~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
++.+++.+|.++...|++++|+..|++++++.|.+ ..+...+..+...
T Consensus 68 ~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~ 115 (136)
T 2fo7_A 68 SAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS-AEAWYNLGNAYYK 115 (136)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHH
Confidence 99999999999999999999999999999999987 5565556555433
No 104
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=99.16 E-value=4.9e-10 Score=101.51 Aligned_cols=128 Identities=16% Similarity=0.162 Sum_probs=105.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHH---------------HHHHhhhhhHHHHHHHHHHHHcCC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEE---------------GKVFVGKRNLLHLNVAACLLKLGE 250 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e---------------~~~~~~~~~~~~~N~a~~~~kl~~ 250 (414)
+..+...|..++..|+|.+|+..|.+++.. .|..... ..........++.++|.+++.+|+
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~----~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLTE----HRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSD 154 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHhc----CchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcC
Confidence 677888999999999999999999999983 3321100 000122345689999999999999
Q ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 251 CRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
|++|+..+.+++.++|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 155 ~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~g 221 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-VRAYIRKATAQIAVK 221 (258)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCcccHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCHHH-HHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999998 667777776655444
No 105
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=99.16 E-value=8e-11 Score=119.07 Aligned_cols=112 Identities=29% Similarity=0.487 Sum_probs=99.9
Q ss_pred CCCchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHH
Q 015006 175 TGLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKS 254 (414)
Q Consensus 175 ~~~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A 254 (414)
..++..++...+..+...|+.+++.|+|.+|+..|++++. ..|.+ ..+++++|.|++++|+|++|
T Consensus 14 ~~~~~~~~~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~g~~~~A 78 (537)
T 3fp2_A 14 KGLSPSQRQAYAVQLKNRGNHFFTAKNFNEAIKYYQYAIE----LDPNE-----------PVFYSNISACYISTGDLEKV 78 (537)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHHHTTCCC-CHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHH
T ss_pred cCCCcchhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh----hCCCC-----------cHHHHHHHHHHHHcCCHHHH
Confidence 4567788888999999999999999999999999999999 57766 67999999999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 255 IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 255 ~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+..|.+++.++|+++.+++++|.++..+|++++|+..|+ ++.++|+.
T Consensus 79 ~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~-~~~~~~~~ 125 (537)
T 3fp2_A 79 IEFTTKALEIKPDHSKALLRRASANESLGNFTDAMFDLS-VLSLNGDF 125 (537)
T ss_dssp HHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHH-HHC-----
T ss_pred HHHHHHHHhcCCchHHHHHHHHHHHHHcCCHHHHHHHHH-HHhcCCCC
Confidence 999999999999999999999999999999999999995 99998875
No 106
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.15 E-value=4.4e-11 Score=126.35 Aligned_cols=133 Identities=14% Similarity=0.109 Sum_probs=98.4
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++|+|.+++.+|+|++|+.++++|++++
T Consensus 433 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 497 (681)
T 2pzi_A 433 VELPLMEVRALLDLGDVAKATRKLDDLAE----RVGWR-----------WRLVWYRAVAELLTGDYDSATKHFTEVLDTF 497 (681)
T ss_dssp SHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HHCCC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hhHHHHHHHHHHhcCCHHHHHHHHHHHhc----cCcch-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 66788889999999999999999999998 56666 5677788888888888888888888888888
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKP 336 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (414)
|+++.+++++|.++..+|++++ +..|++|++++|++ ..+...+..+...+.+..+ ....+.+.....+
T Consensus 498 P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P~~-~~a~~~lg~~~~~~g~~~~-A~~~~~~al~l~P 565 (681)
T 2pzi_A 498 PGELAPKLALAATAELAGNTDE-HKFYQTVWSTNDGV-ISAAFGLARARSAEGDRVG-AVRTLDEVPPTSR 565 (681)
T ss_dssp TTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCTTC-HHHHHHHHHHHHHTTCHHH-HHHHHHTSCTTST
T ss_pred CCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCCch-HHHHHHHHHHHHHcCCHHH-HHHHHHhhcccCc
Confidence 8888888888888888888887 88888888888876 5566666666554443332 2334444444333
No 107
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.14 E-value=8.5e-11 Score=124.21 Aligned_cols=111 Identities=15% Similarity=0.132 Sum_probs=100.8
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..+...|..++..|+|++|+..|++|+. +.|.+ ..+++|+|.|+.++|+|++ +.+|++|++++|
T Consensus 468 ~a~~~lg~~~~~~g~~~~A~~~~~~al~----l~P~~-----------~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P 531 (681)
T 2pzi_A 468 RLVWYRAVAELLTGDYDSATKHFTEVLD----TFPGE-----------LAPKLALAATAELAGNTDE-HKFYQTVWSTND 531 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH----HSTTC-----------SHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCC-----------hHHHHHHHHHHHHcCChHH-HHHHHHHHHhCC
Confidence 3567889999999999999999999999 67777 6789999999999999999 999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+++.+++++|.++..+|++++|+..|++|++++|++ ..+...+..+.
T Consensus 532 ~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~a~~~~~~~~ 578 (681)
T 2pzi_A 532 GVISAAFGLARARSAEGDRVGAVRTLDEVPPTSRHF-TTARLTSAVTL 578 (681)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTTSTTH-HHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHcCCHHHHHHHHHhhcccCccc-HHHHHHHHHHH
Confidence 999999999999999999999999999999999997 66776666654
No 108
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=99.14 E-value=5.4e-10 Score=106.10 Aligned_cols=110 Identities=20% Similarity=0.375 Sum_probs=100.3
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|+.++..|+|.+|+..|.+++. ..|.+ ..++.++|.|++.+|+|++|+..+.+++.++
T Consensus 3 ~~~~~~~~~~~~~~g~~~~A~~~~~~~l~----~~p~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 67 (359)
T 3ieg_A 3 VEKHLELGKKLLAAGQLADALSQFHAAVD----GDPDN-----------YIAYYRRATVFLAMGKSKAALPDLTKVIALK 67 (359)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----hCccc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 56788899999999999999999999999 56666 5689999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC---CCHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK---SSEPDATAALS 311 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P---~n~~~~~~~l~ 311 (414)
|.++.+++.+|.++..+|++++|+..|+++++++| ++ ..+...+.
T Consensus 68 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~-~~~~~~l~ 115 (359)
T 3ieg_A 68 MDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSEQEE-KEAESQLV 115 (359)
T ss_dssp TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHTSCCCHHHH-HHHHHHHH
T ss_pred CCcchHHHHHHHHHHHcCChHHHHHHHHHHHhcCCcccCh-HHHHHHHH
Confidence 99999999999999999999999999999999999 65 45555553
No 109
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=99.14 E-value=6.3e-10 Score=95.17 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=104.0
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++...+++++|+..+.+++.+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 71 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVYD----ADAFD-----------VDVALHLGIAYVKTGAVDRGTELLERSLAD 71 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTCC----TTSCC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCccC-----------hHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 466788899999999999999999999988 55655 568999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
+|.++.+++.+|.++...|++++|+..|+++++++|.+ ..+...+..+....
T Consensus 72 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~~~~ 123 (186)
T 3as5_A 72 APDNVKVATVLGLTYVQVQKYDLAVPLLIKVAEANPIN-FNVRFRLGVALDNL 123 (186)
T ss_dssp CTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCcHh-HHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999997 56666666655443
No 110
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.14 E-value=5.2e-10 Score=107.73 Aligned_cols=113 Identities=17% Similarity=0.125 Sum_probs=96.2
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCC--ChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQ--DDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH 268 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~--~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~ 268 (414)
..|..+...|++.+|+..|.+++. ..|. + ..+++++|.++..+|+|++|+..+.++++++|.+
T Consensus 182 ~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~ 246 (365)
T 4eqf_A 182 RMSKSPVDSSVLEGVKELYLEAAH----QNGDMID-----------PDLQTGLGVLFHLSGEFNRAIDAFNAALTVRPED 246 (365)
T ss_dssp -------CCHHHHHHHHHHHHHHH----HSCSSCC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHH----hCcCccC-----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 348889999999999999999999 4555 3 5689999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 319 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~ 319 (414)
+.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+......
T Consensus 247 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g~ 296 (365)
T 4eqf_A 247 YSLWNRLGATLANGDRSEEAVEAYTRALEIQPGF-IRSRYNLGISCINLGA 296 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-hHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999998 6777777777655543
No 111
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.13 E-value=1.9e-10 Score=98.17 Aligned_cols=77 Identities=19% Similarity=0.236 Sum_probs=63.8
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCCCCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVP 154 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~ip 154 (414)
..|+.|+|+|+|+ .+ |++| +++. +.|.+|.+.+++||+.+|.+|++||++.|.|||+.+||..+
T Consensus 4 ~~gd~V~v~Y~g~-~d--G~~f-dss~------~~f~~G~g~vipG~e~aL~Gm~~Ge~~~v~ipp~~aYG~~~------ 67 (158)
T 3cgm_A 4 GQDKVVTIRYTLQ-VE--GEVL-DQGE------LSYLHGHRNLIPGLEEALEGREEGEAFQAHVPAEKAYGPHD------ 67 (158)
T ss_dssp CTTEEEEEEEEEE-ET--TEEE-EEEE------EEEETTSSSSCHHHHHHHTTCBTTCEEEEEECGGGTTCCCC------
T ss_pred CCCCEEEEEEEEE-EC--CEEE-EeeE------EEEEECCCCcChHHHHHHcCCCCCCEEEEEECcHHHcCCCC------
Confidence 4789999999999 54 9988 4542 89999999999999999999999999999999999999864
Q ss_pred CCcceEEEEEEcccC
Q 015006 155 EGAHIQWEIELLGFE 169 (414)
Q Consensus 155 ~~~~l~~eieL~~~~ 169 (414)
..+++.+.+..|.
T Consensus 68 --~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 68 --PEGVQVVPLSAFP 80 (158)
T ss_dssp --GGGEEEEEGGGSC
T ss_pred --cceEEEEEHHHCC
Confidence 2355555555553
No 112
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.12 E-value=4.2e-10 Score=101.25 Aligned_cols=117 Identities=15% Similarity=0.107 Sum_probs=93.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.++++++
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~ 121 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALE----LDSSA-----------ATAYYGAGNVYVVKEMYKEAKDMFEKALRAG 121 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----cCCcc-----------hHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 56677778888888888888888888887 34444 5678888888888888888888888888888
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
|.+..+++.+|.++..+|++++|+..|++++++.|++ ..+...+..+.....
T Consensus 122 ~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~ 173 (243)
T 2q7f_A 122 MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELNEND-TEARFQFGMCLANEG 173 (243)
T ss_dssp CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc-HHHHHHHHHHHHHcC
Confidence 8888888888888888888888888888888888887 556666665554443
No 113
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.12 E-value=5.9e-10 Score=102.34 Aligned_cols=141 Identities=16% Similarity=0.165 Sum_probs=90.8
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHH----------------H-HHH---------hhhhhHHHHHHH
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEE----------------G-KVF---------VGKRNLLHLNVA 242 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e----------------~-~~~---------~~~~~~~~~N~a 242 (414)
+...|..++..|+|.+|+..|.+++. ..|.+..- . ..+ ......++.++|
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~----~~p~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg 81 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEA----KKYNSPYIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYG 81 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHH----TTCCCSTTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCcHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHH
Confidence 34556666666777777777777766 33333110 0 000 012234578888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH-HHHHHHHHHH
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALS-KLKKQRQEVE 321 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~-~~~~~~~~~~ 321 (414)
.++..+|++++|+..+.++++++|.++.+++.+|.++..+|++++|+..|+++++++|.+ ..+...+. .+.... .-
T Consensus 82 ~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~~--~~ 158 (272)
T 3u4t_A 82 KILMKKGQDSLAIQQYQAAVDRDTTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPTTTD-PKVFYELGQAYYYNK--EY 158 (272)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSSCCC-HHHHHHHHHHHHHTT--CH
T ss_pred HHHHHcccHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcCCCc-HHHHHHHHHHHHHHH--HH
Confidence 888888888888888888888888888888888888888888888888888888888877 55665555 433322 23
Q ss_pred HHHHHHHHhhccCCC
Q 015006 322 SKARKQFKGLFDKKP 336 (414)
Q Consensus 322 ~~~~~~~~~~~~~~~ 336 (414)
.+....+.+.....+
T Consensus 159 ~~A~~~~~~a~~~~p 173 (272)
T 3u4t_A 159 VKADSSFVKVLELKP 173 (272)
T ss_dssp HHHHHHHHHHHHHST
T ss_pred HHHHHHHHHHHHhCc
Confidence 333445555554433
No 114
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=99.12 E-value=4e-10 Score=92.56 Aligned_cols=68 Identities=13% Similarity=0.251 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+.++.|+|.++++.|+|++|+.++++||+++|+++.+|+++|.+|..+|+|++|+.+|++|++++|++
T Consensus 8 A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~ 75 (127)
T 4gcn_A 8 AIAEKDLGNAAYKQKDFEKAHVHYDKAIELDPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRET 75 (127)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCccc
Confidence 56788999999999999999999999999999999999999999999999999999999999998865
No 115
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=99.11 E-value=1.5e-09 Score=97.53 Aligned_cols=131 Identities=21% Similarity=0.262 Sum_probs=102.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.+++++|++++|+..+.+++.++
T Consensus 91 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 155 (243)
T 2q7f_A 91 ATAYYGAGNVYVVKEMYKEAKDMFEKALR----AGMEN-----------GDLFYMLGTVLVKLEQPKLALPYLQRAVELN 155 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTCCS-----------HHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 44566778888899999999999999998 45554 4578889999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFD 333 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (414)
|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+........ .....+++.+.
T Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~~~~~~~~-~A~~~~~~~~~ 221 (243)
T 2q7f_A 156 ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQDPGH-ADAFYNAGVTYAYKENRE-KALEMLDKAID 221 (243)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCTT-HHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCccc-HHHHHHHHHHHHHccCHH-HHHHHHHHHHc
Confidence 9999999999999999999999999999999999987 566666666654443222 22334444443
No 116
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=99.10 E-value=3.6e-10 Score=108.84 Aligned_cols=102 Identities=23% Similarity=0.409 Sum_probs=94.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++++|.++.++|++++|+..+.++++++
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 277 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALT----VRPED-----------YSLWNRLGATLANGDRSEEAVEAYTRALEIQ 277 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC
Confidence 44567789999999999999999999999 56665 6689999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
|+++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 278 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 314 (365)
T 4eqf_A 278 PGFIRSRYNLGISCINLGAYREAVSNFLTALSLQRKS 314 (365)
T ss_dssp TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHCC
T ss_pred CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999999999999999874
No 117
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=99.09 E-value=1.4e-09 Score=88.40 Aligned_cols=85 Identities=15% Similarity=0.134 Sum_probs=77.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...+.++|.++++.|+|.+|+..+.++++++|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 4 a~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 82 (126)
T 3upv_A 4 AEEARLEGKEYFTKSDWPNAVKAYTEMIKRAPEDARGYSNRAAALAKLMSFPEAIADCNKAIEKDPNF-VRAYIRKATAQ 82 (126)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999998 67777777776
Q ss_pred HHHHHH
Q 015006 315 KQRQEV 320 (414)
Q Consensus 315 ~~~~~~ 320 (414)
..+...
T Consensus 83 ~~~~~~ 88 (126)
T 3upv_A 83 IAVKEY 88 (126)
T ss_dssp HHTTCH
T ss_pred HHHhCH
Confidence 555433
No 118
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.09 E-value=1.8e-09 Score=106.64 Aligned_cols=103 Identities=20% Similarity=0.393 Sum_probs=97.4
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..+++.|+|.+|+..|.+++. ..|.+ ..+++++|.|++.+|++++|+..+.+++++
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 89 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVD----GDPDN-----------YIAYYRRATVFLAMGKSKAALPDLTKVIQL 89 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhc
Confidence 477888999999999999999999999998 56665 679999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+|.++.+++.+|.++..+|++++|+..|+++++++|++
T Consensus 90 ~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~ 127 (450)
T 2y4t_A 90 KMDFTAARLQRGHLLLKQGKLDEAEDDFKKVLKSNPSE 127 (450)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCCCH
T ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999999999999999986
No 119
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=99.09 E-value=9.5e-10 Score=88.60 Aligned_cols=101 Identities=27% Similarity=0.492 Sum_probs=91.1
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++..++++++|+..+.+++...|
T Consensus 36 ~~~~~~a~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~ 100 (136)
T 2fo7_A 36 EAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPRS-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALELDP 100 (136)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHHH----HCCCc-----------hHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCC
Confidence 3455678888889999999999999998 45544 56789999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
.+..+++.+|.++..+|++++|+..|++++.++|++
T Consensus 101 ~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~ 136 (136)
T 2fo7_A 101 RSAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPRS 136 (136)
T ss_dssp TCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHSTTC
T ss_pred CChHHHHHHHHHHHHHccHHHHHHHHHHHHccCCCC
Confidence 999999999999999999999999999999999863
No 120
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.09 E-value=1.2e-09 Score=106.24 Aligned_cols=143 Identities=16% Similarity=0.263 Sum_probs=90.7
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH-----------------H------HHhhhhhHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-----------------K------VFVGKRNLLHLNVA 242 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~-----------------~------~~~~~~~~~~~N~a 242 (414)
+..+...|..+...|++.+|+..|.+++. ..|.+..-. . ...+....++.++|
T Consensus 169 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~ 244 (388)
T 1w3b_A 169 AVAWSNLGCVFNAQGEIWLAIHHFEKAVT----LDPNFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLA 244 (388)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHh----cCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHH
Confidence 45566667777777777777777777776 344431100 0 01111245677777
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHH
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVES 322 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~ 322 (414)
.++.++|++++|+..+.++++++|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+........
T Consensus 245 ~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~~~g~~~- 322 (388)
T 1w3b_A 245 CVYYEQGLIDLAIDTYRRAIELQPHFPDAYCNLANALKEKGSVAEAEDCYNTALRLCPTH-ADSLNNLANIKREQGNIE- 322 (388)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTCSSCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHTTTCHH-
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCccc-HHHHHHHHHHHHHcCCHH-
Confidence 778888888888888888888777777778888888888888888888888888877776 455555555544333222
Q ss_pred HHHHHHHhhccC
Q 015006 323 KARKQFKGLFDK 334 (414)
Q Consensus 323 ~~~~~~~~~~~~ 334 (414)
.....+.++...
T Consensus 323 ~A~~~~~~al~~ 334 (388)
T 1w3b_A 323 EAVRLYRKALEV 334 (388)
T ss_dssp HHHHHHHHHTTS
T ss_pred HHHHHHHHHHhc
Confidence 223444444443
No 121
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.09 E-value=9e-10 Score=103.94 Aligned_cols=112 Identities=21% Similarity=0.257 Sum_probs=61.1
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH-------------------HHH------hhhhhHHHHHH
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-------------------KVF------VGKRNLLHLNV 241 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~-------------------~~~------~~~~~~~~~N~ 241 (414)
..+...|..+.+.|++.+|+..|++++. ..|.+.... ..+ .+....+++|+
T Consensus 131 ~~~~~l~~~~~~~g~~~~A~~~l~~~~~----~~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~~p~~~~~~~~l 206 (291)
T 3mkr_A 131 ECMAMTVQILLKLDRLDLARKELKKMQD----QDEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADKCSPTLLLLNGQ 206 (291)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHh----hCcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhCCCcHHHHHHH
Confidence 3445566677777777777777777776 344331000 000 00113345555
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHH-HHHHHHHHHhhCCCC
Q 015006 242 AACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEE-AQRDFEMMMKVDKSS 302 (414)
Q Consensus 242 a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~e-A~~~~~~al~l~P~n 302 (414)
|.|+.++|+|++|+..+.++|.++|+++.+++++|.++..+|++++ |...++++++++|++
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~~~p~~~~~l~~l~~~~~~~g~~~eaa~~~~~~~~~~~P~~ 268 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALDKDSGHPETLINLVVLSQHLGKPPEVTNRYLSQLKDAHRSH 268 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCC
Confidence 5555555555555555555555555555555555555555555544 344555555555555
No 122
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=99.09 E-value=3.9e-10 Score=94.16 Aligned_cols=85 Identities=11% Similarity=0.082 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...++++|.++++.|+|.+|+..+.+++.++|.++.+++.+|.++..+|+|++|+..|++|+.++|++ ..+...+..+.
T Consensus 18 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 96 (142)
T 2xcb_A 18 LEQLYALGFNQYQAGKWDDAQKIFQALCMLDHYDARYFLGLGACRQSLGLYEQALQSYSYGALMDINE-PRFPFHAAECH 96 (142)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-cHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999998 56777777776
Q ss_pred HHHHHH
Q 015006 315 KQRQEV 320 (414)
Q Consensus 315 ~~~~~~ 320 (414)
..+...
T Consensus 97 ~~~g~~ 102 (142)
T 2xcb_A 97 LQLGDL 102 (142)
T ss_dssp HHTTCH
T ss_pred HHcCCH
Confidence 555433
No 123
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=99.08 E-value=2.6e-09 Score=86.90 Aligned_cols=98 Identities=12% Similarity=0.084 Sum_probs=82.4
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
..++++|.++++.|+|.+|+..+.++++++|+++.+++.+|.++..+|++++|+..|++|++++|++ ..+...+..+..
T Consensus 18 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P~~-~~~~~~la~~~~ 96 (121)
T 1hxi_A 18 ENPMEEGLSMLKLANLAEAALAFEAVCQKEPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDPKD-IAVHAALAVSHT 96 (121)
T ss_dssp SCHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999999999999999999999999999999998 678888888776
Q ss_pred HHHHHHHHHHHHHHhhccCC
Q 015006 316 QRQEVESKARKQFKGLFDKK 335 (414)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~ 335 (414)
......+. ...+.+.+...
T Consensus 97 ~~g~~~~A-~~~~~~al~~~ 115 (121)
T 1hxi_A 97 NEHNANAA-LASLRAWLLSQ 115 (121)
T ss_dssp HHHHHHHH-HHHHHHHHC--
T ss_pred HcCCHHHH-HHHHHHHHHhC
Confidence 66544433 34555555443
No 124
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=99.08 E-value=1.9e-09 Score=81.62 Aligned_cols=79 Identities=24% Similarity=0.446 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
..++.++|.+++.+++|.+|+..+.+++.++|.++.+++++|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~l~~~~ 87 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAKQNLGNAK 87 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCCCC-HHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999998 56766666654
No 125
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.08 E-value=6.1e-10 Score=106.87 Aligned_cols=101 Identities=22% Similarity=0.366 Sum_probs=63.3
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++.++|++++|+..+.+++.++|
T Consensus 218 ~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~~~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 282 (368)
T 1fch_A 218 DVQCGLGVLFNLSGEYDKAVDCFTAALS----VRPND-----------YLLWNKLGATLANGNQSEEAVAAYRRALELQP 282 (368)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCcCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 3344556666666666666666666666 34433 34566666666666666666666666666666
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
.++.+++.+|.++..+|++++|+..|++++++.|++
T Consensus 283 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~ 318 (368)
T 1fch_A 283 GYIRSRYNLGISCINLGAHREAVEHFLEALNMQRKS 318 (368)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTC
T ss_pred CcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCCCC
Confidence 666666666666666666666666666666666654
No 126
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.08 E-value=8.4e-10 Score=103.79 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=98.2
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++........... ......++.++|.++.++|++++|+..+.++++++
T Consensus 193 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~ 266 (330)
T 3hym_B 193 PFVMHEVGVVAFQNGEWKTAEKWFLDALEKIKAIGNEVT------VDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI 266 (330)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTTSCSCT------TTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcccHHHHHHHHHHHHHHhhhcccccc------ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 344566777788888888888888888875432211100 01225689999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
|+++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+
T Consensus 267 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~ 313 (330)
T 3hym_B 267 PQNASTYSAIGYIHSLMGNFENAVDYFHTALGLRRDD-TFSVTMLGHC 313 (330)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHTTTTTCSCC-HHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhccHHHHHHHHHHHHccCCCc-hHHHHHHHHH
Confidence 9999999999999999999999999999999999998 5666666654
No 127
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=99.06 E-value=1.1e-09 Score=100.48 Aligned_cols=116 Identities=16% Similarity=0.204 Sum_probs=99.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.+|..+|+|++|+..+.++++++
T Consensus 74 ~~~~~~lg~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~ 138 (272)
T 3u4t_A 74 SADFEYYGKILMKKGQDSLAIQQYQAAVD----RDTTR-----------LDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT 138 (272)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------THHHHHHHHHHHHTTCHHHHHHHHGGGCCSS
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh----cCccc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHhhcC
Confidence 55577889999999999999999999999 56655 5689999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
|.++.+++.+|......+++++|+..|+++++++|++ ..+...+..+...+
T Consensus 139 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~p~~-~~~~~~~~~~~~~~ 189 (272)
T 3u4t_A 139 TTDPKVFYELGQAYYYNKEYVKADSSFVKVLELKPNI-YIGYLWRARANAAQ 189 (272)
T ss_dssp CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC-HHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc-hHHHHHHHHHHHHc
Confidence 9999999999955555569999999999999999998 55655555554433
No 128
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=99.06 E-value=3.1e-09 Score=97.35 Aligned_cols=131 Identities=16% Similarity=0.157 Sum_probs=104.2
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK 270 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~k 270 (414)
..+..+...|+|.+|+..|.+++.. .+.++ .....++.++|.++..+|+|++|+..+.+++.++|.++.
T Consensus 10 ~~~~~~~~~~~~~~A~~~~~~~~~~----~~~~~-------~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~ 78 (275)
T 1xnf_A 10 VLAVPLQPTLQQEVILARMEQILAS----RALTD-------DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPE 78 (275)
T ss_dssp GSCCCCCCCHHHHHHHHHHHHHHTS----SCCCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCCCHH
T ss_pred ceeeccCccchHHHHHHHHHHHHhc----ccccC-------chhHHHHHHHHHHHHHcccHHHHHHHHHHHHHcCCCcHH
Confidence 3455667789999999999999983 22221 223678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015006 271 GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDK 334 (414)
Q Consensus 271 a~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (414)
+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+........ .....+.+.+..
T Consensus 79 ~~~~la~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~la~~~~~~g~~~-~A~~~~~~a~~~ 140 (275)
T 1xnf_A 79 VFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY-NYAHLNRGIALYYGGRDK-LAQDDLLAFYQD 140 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-THHHHHHHHHHHHTTCHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHhcCccc-cHHHHHHHHHHHHhccHH-HHHHHHHHHHHh
Confidence 99999999999999999999999999999997 567777776655443332 223344444443
No 129
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.06 E-value=3e-09 Score=94.09 Aligned_cols=97 Identities=16% Similarity=0.160 Sum_probs=49.4
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 72 (225)
T 2vq2_A 8 SNIKTQLAMEYMRGQDYRQATASIEDALK----SDPKN-----------ELAWLVRAEIYQYLKVNDKAQESFRQALSIK 72 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHH----hCccc-----------hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC
Confidence 44555666666666666666666666666 33333 2344444444444444444444444444444
Q ss_pred CCcHHHHHHHHHHHHHc-CCHHHHHHHHHHHHh
Q 015006 266 PAHVKGLYRRGMAYMAL-GEFEEAQRDFEMMMK 297 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l-~~~~eA~~~~~~al~ 297 (414)
|.+..+++.+|.++..+ |++++|+..|+++++
T Consensus 73 ~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~~~~ 105 (225)
T 2vq2_A 73 PDSAEINNNYGWFLCGRLNRPAESMAYFDKALA 105 (225)
T ss_dssp TTCHHHHHHHHHHHHTTTCCHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhcCcHHHHHHHHHHHHc
Confidence 44444444444444444 444444444444444
No 130
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=99.06 E-value=1.4e-09 Score=85.18 Aligned_cols=67 Identities=16% Similarity=0.307 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
..+++++|.+++++|+|++|+..+.++++++|+++.+++.+|.++..+|++++|+..|++++++.|.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~ 73 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEVARE 73 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhc
Confidence 6789999999999999999999999999999999999999999999999999999999999999764
No 131
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=99.06 E-value=2.3e-09 Score=104.12 Aligned_cols=125 Identities=20% Similarity=0.153 Sum_probs=83.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH-----------------------HHHhhhhhHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG-----------------------KVFVGKRNLLHLNVA 242 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~-----------------------~~~~~~~~~~~~N~a 242 (414)
+..+...|..+...|++.+|+..|.+++. ..|.+..-. ....+....++.++|
T Consensus 135 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~----~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~lg 210 (388)
T 1w3b_A 135 YCVRSDLGNLLKALGRLEEAKACYLKAIE----TQPNFAVAWSNLGCVFNAQGEIWLAIHHFEKAVTLDPNFLDAYINLG 210 (388)
T ss_dssp THHHHHHHHHHHTTSCHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 44566788889999999999999999998 455542110 001122234566667
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
.++..+++|++|+..+.+++.++|+++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+..
T Consensus 211 ~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~~ 282 (388)
T 1w3b_A 211 NVLKEARIFDRAVAAYLRALSLSPNHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQPHF-PDAYCNLANALK 282 (388)
T ss_dssp HHHHTTTCTTHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCSSC-HHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHhhCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-HHHHHHHHHHHH
Confidence 777777777777777777777777777777777777777777777777777777777766 445555554443
No 132
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.06 E-value=2.4e-09 Score=97.16 Aligned_cols=111 Identities=14% Similarity=0.199 Sum_probs=65.5
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD--AN 265 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~--~d 265 (414)
.+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.+++. ..
T Consensus 73 ~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~ 137 (252)
T 2ho1_A 73 AHAALAVVFQTEMEPKLADEEYRKALA----SDSRN-----------ARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLY 137 (252)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH----HCcCc-----------HHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccC
Confidence 445556666666677777777777666 33333 34555666666666666666666666666 55
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
|.++.+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+.
T Consensus 138 ~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~ 185 (252)
T 2ho1_A 138 PERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQ-PSVALEMADLL 185 (252)
T ss_dssp TTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCccc-HHHHHHHHHHH
Confidence 5566666666666666666666666666666666655 34444444443
No 133
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=99.06 E-value=2.8e-09 Score=94.33 Aligned_cols=65 Identities=18% Similarity=0.219 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 300 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P 300 (414)
.++.++|.++.++|++++|+..+.++++.+|.++.+++.+|.++..+|++++|+..|+++++++|
T Consensus 114 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~ 178 (225)
T 2vq2_A 114 IANLNKGICSAKQGQFGLAEAYLKRSLAAQPQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVE 178 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Confidence 34455555555555555555555555555555555555555555555555555555555555555
No 134
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=99.04 E-value=1.4e-09 Score=102.33 Aligned_cols=117 Identities=14% Similarity=0.158 Sum_probs=94.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHH----------
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSI---------- 255 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~---------- 255 (414)
+..+...|..++..|++.+|+..|++++. ..|.+ ..+++++|.+++.+|++++|+
T Consensus 117 ~~~~~~~a~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~la~~~~~~g~~~~A~~~l~~~~~~~ 181 (287)
T 3qou_A 117 EELXAQQAMQLMQESNYTDALPLLXDAWQ----LSNQN-----------GEIGLLLAETLIALNRSEDAEAVLXTIPLQD 181 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HTTSC-----------HHHHHHHHHHHHHTTCHHHHHHHHTTSCGGG
T ss_pred hhhHHHHHHHHHhCCCHHHHHHHHHHHHH----hCCcc-----------hhHHHHHHHHHHHCCCHHHHHHHHHhCchhh
Confidence 45577889999999999999999999999 67777 456777777777777776665
Q ss_pred ------------------------HHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHH
Q 015006 256 ------------------------EACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE-PDATAAL 310 (414)
Q Consensus 256 ------------------------~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~-~~~~~~l 310 (414)
..+.+++..+|+++.+++.+|.++...|++++|+..|.++++++|++. ..++..|
T Consensus 182 p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l 261 (287)
T 3qou_A 182 QDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTF 261 (287)
T ss_dssp CSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHH
T ss_pred cchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHH
Confidence 445556778899999999999999999999999999999999999862 3566666
Q ss_pred HHHHHHH
Q 015006 311 SKLKKQR 317 (414)
Q Consensus 311 ~~~~~~~ 317 (414)
..+...+
T Consensus 262 ~~~~~~~ 268 (287)
T 3qou_A 262 QEILAAL 268 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHc
Confidence 6665544
No 135
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=99.04 E-value=2.6e-09 Score=100.73 Aligned_cols=90 Identities=14% Similarity=0.147 Sum_probs=68.2
Q ss_pred HcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 015006 247 KLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARK 326 (414)
Q Consensus 247 kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~ 326 (414)
..+++++|+..+.++++.+|+++.+++.+|.++..+|++++|+..|++|++++|++ .++..++..+........+....
T Consensus 178 ~~~~~~eA~~~~~~~l~~~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~p~~-~~~l~~l~~~~~~~g~~~eaa~~ 256 (291)
T 3mkr_A 178 GGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKDSGH-PETLINLVVLSQHLGKPPEVTNR 256 (291)
T ss_dssp CTTHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTTCCHHHHHH
T ss_pred CchHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHcCCCHHHHHH
Confidence 34889999999999999999999999999999999999999999999999999988 67777777665554433333334
Q ss_pred HHHhhccCCCC
Q 015006 327 QFKGLFDKKPG 337 (414)
Q Consensus 327 ~~~~~~~~~~~ 337 (414)
.+++.....+.
T Consensus 257 ~~~~~~~~~P~ 267 (291)
T 3mkr_A 257 YLSQLKDAHRS 267 (291)
T ss_dssp HHHHHHHHCTT
T ss_pred HHHHHHHhCCC
Confidence 44444444433
No 136
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=99.04 E-value=2.5e-09 Score=108.23 Aligned_cols=134 Identities=11% Similarity=0.043 Sum_probs=105.7
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHH
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEAC 258 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~ 258 (414)
..+.+..+....+.+..+..+|+|.+|+..|.++|.....+...+ +.....+++|+|.+|..+|+|++|+..+
T Consensus 302 v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~ 374 (490)
T 3n71_A 302 VKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADT-------NLYVLRLLSIASEVLSYLQAYEEASHYA 374 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCC-------CHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 345556677777888888899999999999999999776554444 4456789999999999999999999999
Q ss_pred HHHHHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHH---HHHHHHHHHHHHH
Q 015006 259 NKVLDAN--------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----DKSSEPDAT---AALSKLKKQRQEV 320 (414)
Q Consensus 259 ~~al~~d--------p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l-----~P~n~~~~~---~~l~~~~~~~~~~ 320 (414)
.++|++. |+-+.++.++|.+|..+|+|++|+..|++||++ -|++ +.+. ..|..+...+...
T Consensus 375 ~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~H-p~~~~~~~~l~~~~~e~~~~ 451 (490)
T 3n71_A 375 RRMVDGYMKLYHHNNAQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSH-PITKDLEAMRMQTEMELRMF 451 (490)
T ss_dssp HHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS-HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHH
Confidence 9999763 445788999999999999999999999999986 5666 3344 3444444433333
No 137
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=99.04 E-value=2.9e-09 Score=83.74 Aligned_cols=68 Identities=19% Similarity=0.340 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
...+.++|.+++.+|+|++|+..+.++++++|.++.+++++|.++..+|++++|+..|+++++++|++
T Consensus 4 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQGLYREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRYTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSCSST
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCc
Confidence 45789999999999999999999999999999999999999999999999999999999999999987
No 138
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=99.04 E-value=2e-09 Score=101.00 Aligned_cols=118 Identities=17% Similarity=0.263 Sum_probs=96.4
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|++.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.++++++
T Consensus 172 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 236 (327)
T 3cv0_A 172 AQLHASLGVLYNLSNNYDSAAANLRRAVE----LRPDD-----------AQLWNKLGATLANGNRPQEALDAYNRALDIN 236 (327)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC
Confidence 34566778888888999999999999988 45555 5678899999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----------HHHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS-----------EPDATAALSKLKKQRQ 318 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n-----------~~~~~~~l~~~~~~~~ 318 (414)
|.++.+++.+|.++..+|++++|+..|+++++++|++ ...+...+..+...+.
T Consensus 237 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g 300 (327)
T 3cv0_A 237 PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYMQVGGTTPTGEASREATRSMWDFFRMLLNVMN 300 (327)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSCC-----CCTHHHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCccccccccchhhcCHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999998882 2456556665554443
No 139
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=99.03 E-value=1.7e-09 Score=103.73 Aligned_cols=101 Identities=13% Similarity=0.124 Sum_probs=94.0
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~ 267 (414)
.+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.|+.++|++++|+..+.++++++|.
T Consensus 66 ~~~~~~~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 130 (368)
T 1fch_A 66 QPFEEGLRRLQEGDLPNAVLLFEAAVQ----QDPKH-----------MEAWQYLGTTQAENEQELLAISALRRCLELKPD 130 (368)
T ss_dssp SHHHHHHHHHHTTCHHHHHHHHHHHHH----SCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcCCC
Confidence 345678889999999999999999999 67766 678999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 015006 268 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 303 (414)
Q Consensus 268 ~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~ 303 (414)
++.+++.+|.++..+|++++|+..|+++++++|.+.
T Consensus 131 ~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~ 166 (368)
T 1fch_A 131 NQTALMALAVSFTNESLQRQACEILRDWLRYTPAYA 166 (368)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTG
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCcCcH
Confidence 999999999999999999999999999999999863
No 140
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=99.03 E-value=2e-09 Score=97.65 Aligned_cols=117 Identities=18% Similarity=0.161 Sum_probs=103.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.+++.+
T Consensus 36 ~~~~~~~~a~~~~~~~~~~~A~~~~~~al~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 100 (252)
T 2ho1_A 36 ARDAYIQLGLGYLQRGNTEQAKVPLRKALE----IDPSS-----------ADAHAALAVVFQTEMEPKLADEEYRKALAS 100 (252)
T ss_dssp HHHHHHHHHHHHHHTTCTGGGHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHh----cCCCh-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 377888999999999999999999999998 45555 568999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh--hCCCCHHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK--VDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~--l~P~n~~~~~~~l~~~~~~~ 317 (414)
+|.+..+++.+|.++..+|++++|+..|++++. ..|.+ ..+...+..+....
T Consensus 101 ~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~ 154 (252)
T 2ho1_A 101 DSRNARVLNNYGGFLYEQKRYEEAYQRLLEASQDTLYPER-SRVFENLGLVSLQM 154 (252)
T ss_dssp CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTCTTCTTH-HHHHHHHHHHHHHT
T ss_pred CcCcHHHHHHHHHHHHHHhHHHHHHHHHHHHHhCccCccc-HHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999 77775 55666666554433
No 141
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.02 E-value=1.8e-10 Score=96.06 Aligned_cols=57 Identities=32% Similarity=0.464 Sum_probs=42.6
Q ss_pred ccccCCcCcEEEEEEcCCCcCCC-CCCCCCCCCCeeeEEEEeeEEEeeeeec--CCCceEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPS-PLMPVVEGCEEVHFEVELVHLIQVRDML--GDGRLIK 59 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~-~~~~~ip~~~~l~~~vel~~~~~~~dv~--~dg~~~k 59 (414)
||.+|++||++.|.|||++|||. +.++.||+|++|+|+|+|+++.. .|+. +||+|+|
T Consensus 76 ~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~v~l~~i~~-~~l~~~~d~~v~k 135 (135)
T 1r9h_A 76 GVATMTKGEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVELFEWSA-EDISPDRDGTILR 135 (135)
T ss_dssp HHTTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC--------------
T ss_pred HHhcCCCCCEEEEEEChHHcCCCCCCCCCcCcCCcEEEEEEEEEeec-CCcCcCCCCcccC
Confidence 68999999999999999999998 45688999999999999999975 5888 8898876
No 142
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=99.01 E-value=4.3e-09 Score=98.86 Aligned_cols=117 Identities=13% Similarity=0.063 Sum_probs=101.8
Q ss_pred HHHHHhhhccccccc-cHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 186 AEKIRVTGNRLFKEG-KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g-~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
+..+...|..++..| ++.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.+++.+
T Consensus 90 ~~~~~~l~~~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 154 (330)
T 3hym_B 90 PVSWFAVGCYYLMVGHKNEHARRYLSKATT----LEKTY-----------GPAWIAYGHSFAVESEHDQAMAAYFTAAQL 154 (330)
T ss_dssp THHHHHHHHHHHHSCSCHHHHHHHHHHHHT----TCTTC-----------THHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHH----hCCcc-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 345667788888999 99999999999998 56665 568999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 265 NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
.|.+..+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~-~~~~~~l~~~~~~~~ 207 (330)
T 3hym_B 155 MKGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIAPED-PFVMHEVGVVAFQNG 207 (330)
T ss_dssp TTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTC-HHHHHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999999998 567667766655443
No 143
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=99.01 E-value=1.6e-09 Score=107.90 Aligned_cols=122 Identities=16% Similarity=0.064 Sum_probs=98.3
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|++|+..|++|+.++....+.. .......+|.|+|.+|..+|+|++|+.++.+++++.
T Consensus 51 a~~yn~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~------~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~ 124 (472)
T 4g1t_A 51 ATMCNLLAYLKHLKGQNEAALECLRKAEELIQQEHADQ------AEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVC 124 (472)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGG------CTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccc------cchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh
Confidence 55677889999999999999999999998654322111 012236689999999999999999999999999874
Q ss_pred --------CCcHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 266 --------PAHVKGLYRRGMAYMALG--EFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 266 --------p~~~ka~~r~g~a~~~l~--~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+..+.++..+|.++..++ +|++|+..|++|++++|++ ..+...+..+.
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~~~p~~-~~~~~~~~~~~ 182 (472)
T 4g1t_A 125 EKFSSPYRIESPELDCEEGWTRLKCGGNQNERAKVCFEKALEKKPKN-PEFTSGLAIAS 182 (472)
T ss_dssp HHSCCSSCCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHSTTC-HHHHHHHHHHH
T ss_pred HhcccccchhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 456788999999888765 6999999999999999998 66766666554
No 144
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=99.01 E-value=1.4e-09 Score=94.11 Aligned_cols=114 Identities=17% Similarity=0.204 Sum_probs=80.2
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHH--------------
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKS-------------- 254 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A-------------- 254 (414)
+...|..++..|+|.+|+..|++++. ..|.+ ..++.++|.+++.+|++++|
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~----~~P~~-----------~~a~~~la~~~~~~g~~~~A~~~~~~a~~~~p~~ 73 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSD----ELQSR-----------GDVKLAKADCLLETKQFELAQELLATIPLEYQDN 73 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCH----HHHTS-----------HHHHHHHHHHHHHTTCHHHHHHHHTTCCGGGCCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH----HCCCc-----------HHHHHHHHHHHHHCCCHHHHHHHHHHhhhccCCh
Confidence 34566677777888888888888877 45554 34555555555555555554
Q ss_pred --------------------HHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH-HHHHHHHHHH
Q 015006 255 --------------------IEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE-PDATAALSKL 313 (414)
Q Consensus 255 --------------------~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~-~~~~~~l~~~ 313 (414)
+..+.++++++|+++.+++.+|.++..+|++++|+..|+++++++|++. ..+...+..+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~ 153 (176)
T 2r5s_A 74 SYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDI 153 (176)
T ss_dssp HHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHH
Confidence 4455566677888888899999999999999999999999999988641 3466666655
Q ss_pred HHHH
Q 015006 314 KKQR 317 (414)
Q Consensus 314 ~~~~ 317 (414)
...+
T Consensus 154 ~~~~ 157 (176)
T 2r5s_A 154 LSAL 157 (176)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 5443
No 145
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=99.01 E-value=4e-09 Score=89.94 Aligned_cols=101 Identities=21% Similarity=0.219 Sum_probs=84.9
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...+.++|.++++.++|++|+..+.++++++|.++.+++++|.++..+|+|++|+..|+++++++|++ ..+...+..+.
T Consensus 11 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 89 (164)
T 3sz7_A 11 SDKLKSEGNAAMARKEYSKAIDLYTQALSIAPANPIYLSNRAAAYSASGQHEKAAEDAELATVVDPKY-SKAWSRLGLAR 89 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 66899999999999999999999999999999999999999999999999999999999999999998 67888888777
Q ss_pred HHHHHHHHHHHHHHHhhccCCCC
Q 015006 315 KQRQEVESKARKQFKGLFDKKPG 337 (414)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~ 337 (414)
..+.+..+ ....+.+.+...+.
T Consensus 90 ~~~g~~~~-A~~~~~~al~~~p~ 111 (164)
T 3sz7_A 90 FDMADYKG-AKEAYEKGIEAEGN 111 (164)
T ss_dssp HHTTCHHH-HHHHHHHHHHHHSS
T ss_pred HHccCHHH-HHHHHHHHHHhCCC
Confidence 66554433 23444444444333
No 146
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=99.01 E-value=2.3e-10 Score=88.82 Aligned_cols=68 Identities=22% Similarity=0.475 Sum_probs=54.9
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 015006 239 LNVAACLLKLGECRKSIEACNKVLDANPAHVK-GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDAT 307 (414)
Q Consensus 239 ~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~k-a~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~ 307 (414)
+++|.++++.++|++|+..+.++++.+|.++. +++.+|.++..+|++++|+..|+++++++|++ ..+.
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~ 72 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQTEPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDS-PALQ 72 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHCSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTS-THHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCc-HHHH
Confidence 46788888888888888888888888888888 88888888888888888888888888888877 3443
No 147
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=99.01 E-value=3.4e-09 Score=95.56 Aligned_cols=136 Identities=15% Similarity=0.167 Sum_probs=102.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH------------------
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK------------------ 247 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k------------------ 247 (414)
...+...|..+++.|+|.+|+..|.+++. ..|.+.. ...+++++|.|+.+
T Consensus 41 ~~a~~~lg~~~~~~~~~~~A~~~~~~~l~----~~P~~~~--------~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 108 (225)
T 2yhc_A 41 QQVQLDLIYAYYKNADLPLAQAAIDRFIR----LNPTHPN--------IDYVMYMRGLTNMALDDSALQGFFGVDRSDRD 108 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTCTT--------HHHHHHHHHHHHHHHHC--------------C
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH----HCcCCCc--------HHHHHHHHHHHHHhhhhhhhhhhhccchhhcC
Confidence 34567789999999999999999999999 5666521 12467788888876
Q ss_pred cCCHHHHHHHHHHHHHhCCCcHHHH-----------------HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH--HHHH
Q 015006 248 LGECRKSIEACNKVLDANPAHVKGL-----------------YRRGMAYMALGEFEEAQRDFEMMMKVDKSSEP--DATA 308 (414)
Q Consensus 248 l~~~~~A~~~~~~al~~dp~~~ka~-----------------~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~--~~~~ 308 (414)
++++++|+..+.++++..|++..+. +.+|.++...|++++|+..|+++++..|++.. .+..
T Consensus 109 ~~~~~~A~~~~~~~l~~~P~~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~ 188 (225)
T 2yhc_A 109 PQQARAAFSDFSKLVRGYPNSQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALP 188 (225)
T ss_dssp CHHHHHHHHHHHHHHTTCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSTTSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHCcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHCcCCCccHHHHH
Confidence 5789999999999999999987654 67899999999999999999999999999742 3444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccC
Q 015006 309 ALSKLKKQRQEVESKARKQFKGLFDK 334 (414)
Q Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (414)
.+..+...+....+. ...++.+...
T Consensus 189 ~l~~~~~~~g~~~~A-~~~~~~l~~~ 213 (225)
T 2yhc_A 189 LMENAYRQMQMNAQA-EKVAKIIAAN 213 (225)
T ss_dssp HHHHHHHHTTCHHHH-HHHHHHHHHC
T ss_pred HHHHHHHHcCCcHHH-HHHHHHHHhh
Confidence 455554444333322 3444444443
No 148
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=99.00 E-value=1.8e-09 Score=101.59 Aligned_cols=109 Identities=12% Similarity=0.088 Sum_probs=93.3
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-GECRKSIEACNKVLD 263 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl-~~~~~A~~~~~~al~ 263 (414)
.+..+.+.|+.+.+.|+|.+|+.+|.+|+.+..... + ......++.|+|.+|..+ |++++|+.++.+|++
T Consensus 76 ~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~-------~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~ 146 (292)
T 1qqe_A 76 AGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRG--Q-------FRRGANFKFELGEILENDLHDYAKAIDCYELAGE 146 (292)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcC--C-------HHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHH
Confidence 477888999999999999999999999998653221 1 112256899999999995 999999999999999
Q ss_pred hCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 264 ANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 264 ~dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+.|.+ ..++.++|.++..+|+|++|+..|++++++.|++
T Consensus 147 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 191 (292)
T 1qqe_A 147 WYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSMGN 191 (292)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTSSC
T ss_pred HHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcC
Confidence 98754 5789999999999999999999999999999976
No 149
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.99 E-value=2.4e-09 Score=98.05 Aligned_cols=126 Identities=15% Similarity=0.157 Sum_probs=102.7
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++.........+ ......++.++|.++..+|+|++|+..+.+++.+
T Consensus 42 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 114 (283)
T 3edt_B 42 VATMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 114 (283)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCc-------chHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 477788999999999999999999999998653321111 1234678999999999999999999999999998
Q ss_pred --------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHHHH
Q 015006 265 --------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV--------DKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 265 --------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l--------~P~n~~~~~~~l~~~~~~~~ 318 (414)
+|....+++++|.++..+|++++|+..|++++++ .|.. ..+...+..+.....
T Consensus 115 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~-~~~~~~la~~~~~~g 183 (283)
T 3edt_B 115 REKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRLGPDDPNV-AKTKNNLASCYLKQG 183 (283)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHSCTTCHHH-HHHHHHHHHHHHHHT
T ss_pred HHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcCCCCHHH-HHHHHHHHHHHHHcC
Confidence 5778999999999999999999999999999998 4443 445556666554443
No 150
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=98.99 E-value=3.1e-09 Score=90.54 Aligned_cols=87 Identities=14% Similarity=0.108 Sum_probs=75.0
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-------cHH-----HHHHHHHHHHHcCCHHHHHHHHHHHHhh----
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPA-------HVK-----GLYRRGMAYMALGEFEEAQRDFEMMMKV---- 298 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~-------~~k-----a~~r~g~a~~~l~~~~eA~~~~~~al~l---- 298 (414)
+..+.|+|.+++++|+|++|+..|++||+++|+ +.. +|+++|.|+..+|+|++|+.+|.+||++
T Consensus 11 a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 11 AYLALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 557899999999999999999999999999999 444 9999999999999999999999999999
Q ss_pred ---CCCCHHHHH----HHHHHHHHHHHHHHH
Q 015006 299 ---DKSSEPDAT----AALSKLKKQRQEVES 322 (414)
Q Consensus 299 ---~P~n~~~~~----~~l~~~~~~~~~~~~ 322 (414)
+|++ ..+. ..+..+...+....+
T Consensus 91 ~e~~pd~-~~A~~~~~~~rG~aL~~lgr~eE 120 (159)
T 2hr2_A 91 GELNQDE-GKLWISAVYSRALALDGLGRGAE 120 (159)
T ss_dssp CCTTSTH-HHHHHHHHHHHHHHHHHTTCHHH
T ss_pred ccCCCch-HHHHHHHHHhHHHHHHHCCCHHH
Confidence 9986 5676 666666555544433
No 151
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=98.98 E-value=6.2e-09 Score=87.71 Aligned_cols=104 Identities=13% Similarity=0.178 Sum_probs=87.2
Q ss_pred ccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcC---CHHHHHHHHHHHHHhC-C-CcHHHH
Q 015006 198 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG---ECRKSIEACNKVLDAN-P-AHVKGL 272 (414)
Q Consensus 198 k~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~---~~~~A~~~~~~al~~d-p-~~~ka~ 272 (414)
.......+.+.|.+.+. ..+.+ ..+.+|.|.|+.+.+ ++.+++..++.+++.+ | .+..++
T Consensus 10 ~~~~l~~~~~~y~~e~~----~~~~~-----------~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~~p~~~rd~l 74 (152)
T 1pc2_A 10 SVEDLLKFEKKFQSEKA----AGSVS-----------KSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKGSKEEQRDYV 74 (152)
T ss_dssp CHHHHHHHHHHHHHHHH----TTCCC-----------HHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHc----cCCCc-----------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCccchHHHH
Confidence 33455667788888876 44444 568999999999998 7779999999999999 7 679999
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 273 YRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 273 ~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
|.+|.+++++++|++|+..++++|+++|+| ..+......+..++
T Consensus 75 Y~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n-~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 75 FYLAVGNYRLKEYEKALKYVRGLLQTEPQN-NQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHTSCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 66777666665544
No 152
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.97 E-value=1.7e-09 Score=101.57 Aligned_cols=108 Identities=15% Similarity=0.129 Sum_probs=92.5
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+...|..++..|+|.+|+..|.+|+..+..... + ......+++|+|.+|.++|+|++|+.++.++++
T Consensus 153 ~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~-~-------~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 153 QNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHD-N-------EEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSC-C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccc-c-------hhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34667889999999999999999999999986654322 2 234467999999999999999999999999998
Q ss_pred hCCCc------HHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhC
Q 015006 264 ANPAH------VKGLYRRGMAYMALG-EFEEAQRDFEMMMKVD 299 (414)
Q Consensus 264 ~dp~~------~ka~~r~g~a~~~l~-~~~eA~~~~~~al~l~ 299 (414)
+.+.. +.+++++|.++..+| .+++|+..|++|+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al~i~ 267 (293)
T 3u3w_A 225 ISCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHHTTBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHcCcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 87543 889999999999999 5799999999999873
No 153
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=98.96 E-value=4.5e-09 Score=79.55 Aligned_cols=84 Identities=26% Similarity=0.412 Sum_probs=76.2
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++.+++++++|+..+.+++.+
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALE----LDPNN-----------AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 356777889999999999999999999999 45655 568999999999999999999999999999
Q ss_pred CCCcHHHHHHHHHHHHHcC
Q 015006 265 NPAHVKGLYRRGMAYMALG 283 (414)
Q Consensus 265 dp~~~ka~~r~g~a~~~l~ 283 (414)
+|.++.+++++|.++..+|
T Consensus 73 ~p~~~~~~~~l~~~~~~~g 91 (91)
T 1na3_A 73 DPNNAEAKQNLGNAKQKQG 91 (91)
T ss_dssp CTTCHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHhcC
Confidence 9999999999999998765
No 154
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=98.95 E-value=6.1e-09 Score=80.63 Aligned_cols=62 Identities=13% Similarity=0.077 Sum_probs=55.5
Q ss_pred hhhH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 233 KRNL-LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 233 ~~~~-~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
.... +++++|.|++++|+|++|+..+.++++++|++..++++ +.+.+|+..|++++.++|++
T Consensus 32 ~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~--------~~~~~a~~~~~~~~~~~p~~ 94 (99)
T 2kc7_A 32 VGKDEAYYLMGNAYRKLGDWQKALNNYQSAIELNPDSPALQAR--------KMVMDILNFYNKDMYNQLEH 94 (99)
T ss_dssp STHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTHHHHH--------HHHHHHHHHHCCTTHHHHCC
T ss_pred CcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCCcHHHHHH--------HHHHHHHHHHHHHhccCccc
Confidence 3456 99999999999999999999999999999999998865 67888999999999888875
No 155
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.95 E-value=1.8e-09 Score=101.68 Aligned_cols=109 Identities=15% Similarity=0.097 Sum_probs=89.5
Q ss_pred HHHHHHhhhcccccc-ccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 185 EAEKIRVTGNRLFKE-GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~-g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
.+..+...|..+... |+|.+|+..|.+|+.+..... + ......++.|+|.++.++|+|++|+..+.++++
T Consensus 116 ~a~~~~~lg~~~~~~lg~~~~A~~~~~~Al~~~~~~~--~-------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 186 (292)
T 1qqe_A 116 GANFKFELGEILENDLHDYAKAIDCYELAGEWYAQDQ--S-------VALSNKCFIKCADLKALDGQYIEASDIYSKLIK 186 (292)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhCC--C-------hHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 356788899999996 999999999999999543211 1 112246899999999999999999999999999
Q ss_pred hCCCcHH-------HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 264 ANPAHVK-------GLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 264 ~dp~~~k-------a~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+.|.+.. +++++|.++..+|++++|+..|+++++++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~p~~ 232 (292)
T 1qqe_A 187 SSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNF 232 (292)
T ss_dssp TTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC----
T ss_pred HHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 9987643 78999999999999999999999999999986
No 156
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=98.95 E-value=1.4e-09 Score=108.16 Aligned_cols=85 Identities=16% Similarity=0.249 Sum_probs=74.9
Q ss_pred CCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCCCC
Q 015006 74 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 153 (414)
Q Consensus 74 p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~i 153 (414)
+..||.|+|||+|+. +|++| +++. +.|+.|.+|.|.+++||+.+|.+|++|++..|.+++..+||..+.
T Consensus 158 ~~~gD~V~i~y~g~~---dG~~f-d~~~---~~~~~~~lG~g~~ipgfee~L~G~k~Ge~~~v~v~~~~~yg~~~l---- 226 (432)
T 1w26_A 158 VEAEDRVTIDFTGSV---DGEEF-EGGK---ASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFPEEYHAENL---- 226 (432)
T ss_dssp CCTTCEEEECEEEES---SSCBC-SSCC---CSSEEEETTSCCSCTTHHHHSSSCCSSCEEEEEEECCTTCSCTTT----
T ss_pred CCCCCEEEEEEEEee---CCeEc-cCCC---ccceEEEeCCCCcchHHHHHhCCCCCCCEEEEEECCchhhCCCCC----
Confidence 468999999999994 48988 5542 579999999999999999999999999999999999999997653
Q ss_pred CCCcceEEEEEEcccCC
Q 015006 154 PEGAHIQWEIELLGFEK 170 (414)
Q Consensus 154 p~~~~l~~eieL~~~~~ 170 (414)
+|.++.|+|+|+++..
T Consensus 227 -ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 227 -KGKAAKFAINLKKVEE 242 (432)
T ss_dssp -SSCEEEEEEECCEECC
T ss_pred -CCceEEEEEEEEEEec
Confidence 5789999999999875
No 157
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.93 E-value=1.1e-08 Score=103.29 Aligned_cols=83 Identities=14% Similarity=0.161 Sum_probs=72.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
..++.++|.++..+|+|++|+..+.+++.++|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 310 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~ 388 (537)
T 3fp2_A 310 PPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTL-PEVPTFFAEIL 388 (537)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-THHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHH
Confidence 56889999999999999999999999999999999999999999999999999999999999999987 56766776665
Q ss_pred HHHH
Q 015006 315 KQRQ 318 (414)
Q Consensus 315 ~~~~ 318 (414)
....
T Consensus 389 ~~~g 392 (537)
T 3fp2_A 389 TDRG 392 (537)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 4443
No 158
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=98.92 E-value=6.4e-09 Score=107.04 Aligned_cols=102 Identities=10% Similarity=0.047 Sum_probs=95.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|++|+..|.+++. ..|.+ ..+++|+|.+|.++|++++|+..+.++++++
T Consensus 57 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 121 (568)
T 2vsy_A 57 PEAVARLGRVRWTQQRHAEAAVLLQQASD----AAPEH-----------PGIALWLGHALEDAGQAEAAAAAYTRAHQLL 121 (568)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHh----cCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 45677889999999999999999999999 56766 6689999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHc---CCHHHHHHHHHHHHhhCCCC
Q 015006 266 PAHVKGLYRRGMAYMAL---GEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l---~~~~eA~~~~~~al~l~P~n 302 (414)
|+++.+++.+|.++..+ |++++|+..|+++++++|++
T Consensus 122 p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~p~~ 161 (568)
T 2vsy_A 122 PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQGVGA 161 (568)
T ss_dssp TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHTCCC
T ss_pred CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999 99999999999999999986
No 159
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=98.92 E-value=1.1e-08 Score=101.87 Aligned_cols=119 Identities=10% Similarity=0.049 Sum_probs=96.1
Q ss_pred hhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 182 IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 261 (414)
Q Consensus 182 ~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~a 261 (414)
.+..+....+.+...-..|+|.+|+..|.++|.+.......+ +...+..+.|+|.+|..+|+|++|+..+.++
T Consensus 294 ~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~a 366 (433)
T 3qww_A 294 MVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDS-------NVYMLHMMYQAMGVCLYMQDWEGALKYGQKI 366 (433)
T ss_dssp HHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTT-------SHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChh-------chHHHHHHHHHHHHHHhhcCHHHHHHHHHHH
Confidence 333445555566666677899999999999999776554443 4456789999999999999999999999999
Q ss_pred HHhC--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHH
Q 015006 262 LDAN--------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----DKSSEPDATA 308 (414)
Q Consensus 262 l~~d--------p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l-----~P~n~~~~~~ 308 (414)
|++. |+-+..++++|.+|..+|+|++|+..|++|+++ -|++ +.+..
T Consensus 367 L~i~~~~lG~~Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~i~~~~lG~~H-p~~~~ 425 (433)
T 3qww_A 367 IKPYSKHYPVYSLNVASMWLKLGRLYMGLENKAAGEKALKKAIAIMEVAHGKDH-PYISE 425 (433)
T ss_dssp HHHHHHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTC-HHHHH
T ss_pred HHHHHHHcCCCChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHcCCCC-hHHHH
Confidence 9763 455788999999999999999999999999987 5776 44443
No 160
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=98.92 E-value=1.7e-08 Score=82.51 Aligned_cols=85 Identities=14% Similarity=0.134 Sum_probs=77.5
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...++++|.++++.++|++|+..+.+++.++|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 9 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~l~~~~ 87 (137)
T 3q49_B 9 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS-VKAHFFLGQCQ 87 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHhhCcCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCchh-HHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999998 67777777776
Q ss_pred HHHHHH
Q 015006 315 KQRQEV 320 (414)
Q Consensus 315 ~~~~~~ 320 (414)
......
T Consensus 88 ~~~~~~ 93 (137)
T 3q49_B 88 LEMESY 93 (137)
T ss_dssp HHTTCH
T ss_pred HHHhhH
Confidence 555433
No 161
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.91 E-value=1.7e-08 Score=94.58 Aligned_cols=108 Identities=9% Similarity=0.129 Sum_probs=97.1
Q ss_pred cccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHH
Q 015006 195 RLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYR 274 (414)
Q Consensus 195 ~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r 274 (414)
.++..|++.+|+..|.+++. ..|.+ ..++.++|.++.++|++++|+..+.+++.++|.++.+++.
T Consensus 147 ~~~~~~~~~~A~~~~~~~~~----~~~~~-----------~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~ 211 (327)
T 3cv0_A 147 FFAAPNEYRECRTLLHAALE----MNPND-----------AQLHASLGVLYNLSNNYDSAAANLRRAVELRPDDAQLWNK 211 (327)
T ss_dssp CTTSHHHHHHHHHHHHHHHH----HSTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHH
T ss_pred HHHHcccHHHHHHHHHHHHh----hCCCC-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCcHHHHHH
Confidence 58899999999999999998 45555 5789999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 275 RGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 275 ~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
+|.++..+|++++|+..|+++++++|++ ..+...+..+.....
T Consensus 212 l~~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~l~~~~~~~g 254 (327)
T 3cv0_A 212 LGATLANGNRPQEALDAYNRALDINPGY-VRVMYNMAVSYSNMS 254 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcCCCC-HHHHHHHHHHHHHhc
Confidence 9999999999999999999999999997 567777777655444
No 162
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=98.91 E-value=6.3e-09 Score=81.33 Aligned_cols=99 Identities=17% Similarity=0.114 Sum_probs=81.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS--SEPDATAALSK 312 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~--n~~~~~~~l~~ 312 (414)
..++.++|.+++..++|.+|+..+.++++++|.+..+++.+|.++..+|++++|+..|+++++++|. + ..+...+..
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~-~~~~~~l~~ 84 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKAIQLDPEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYN-KDVWAAKAD 84 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTC-HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccch-HHHHHHHHH
Confidence 4577889999999999999999999999999999999999999999999999999999999999999 8 567777777
Q ss_pred HHHHH-HHHHHHHHHHHHhhccCC
Q 015006 313 LKKQR-QEVESKARKQFKGLFDKK 335 (414)
Q Consensus 313 ~~~~~-~~~~~~~~~~~~~~~~~~ 335 (414)
+.... .... +....+.......
T Consensus 85 ~~~~~~~~~~-~A~~~~~~~~~~~ 107 (112)
T 2kck_A 85 ALRYIEGKEV-EAEIAEARAKLEH 107 (112)
T ss_dssp HHTTCSSCSH-HHHHHHHHHGGGC
T ss_pred HHHHHhCCHH-HHHHHHHHHhhcc
Confidence 66554 4332 2344445444443
No 163
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.88 E-value=1e-08 Score=93.81 Aligned_cols=108 Identities=15% Similarity=0.133 Sum_probs=93.6
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+...|..++..|+|.+|+..|.+++..+......+ ......++.|+|.++..+|+|++|+..+.+++.
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 155 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRALEIREKVLGKF-------HPDVAKQLNNLALLCQNQGKAEEVEYYYRRALE 155 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3567788999999999999999999999999653321111 123467899999999999999999999999999
Q ss_pred h--------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 264 A--------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 264 ~--------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
+ .|..+.+++.+|.++..+|++++|+..|++++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 198 (283)
T 3edt_B 156 IYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILTR 198 (283)
T ss_dssp HHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 9 7888999999999999999999999999999987
No 164
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=98.87 E-value=1.3e-08 Score=86.50 Aligned_cols=99 Identities=13% Similarity=0.192 Sum_probs=82.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDA------------------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 296 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~------------------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al 296 (414)
+..+.++|.++++.|+|.+|+..+.++|.+ +|.++.+|+++|.||+.+|+|++|+.+|.+|+
T Consensus 11 a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 11 VEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 567899999999999999999999999999 88888999999999999999999999999999
Q ss_pred hhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 015006 297 KVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKK 335 (414)
Q Consensus 297 ~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (414)
+++|++ ..+...+..+...+....+. ...+.+.+...
T Consensus 91 ~~~p~~-~~a~~~~g~~~~~~g~~~~A-~~~~~~al~l~ 127 (162)
T 3rkv_A 91 KREETN-EKALFRRAKARIAAWKLDEA-EEDLKLLLRNH 127 (162)
T ss_dssp HHSTTC-HHHHHHHHHHHHHTTCHHHH-HHHHHHHHHHC
T ss_pred hcCCcc-hHHHHHHHHHHHHHhcHHHH-HHHHHHHHhcC
Confidence 999998 66777777776655544433 33444444433
No 165
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=98.86 E-value=1.3e-08 Score=85.86 Aligned_cols=98 Identities=14% Similarity=0.104 Sum_probs=85.1
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.++..+|++++|+..+.+++.++
T Consensus 47 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~----~~~~~-----------~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~ 111 (166)
T 1a17_A 47 AIYYGNRSLAYLRTECYGYALGDATRAIE----LDKKY-----------IKGYYRRAASNMALGKFRAALRDYETVVKVK 111 (166)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCccc-----------HHHHHHHHHHHHHhccHHHHHHHHHHHHHhC
Confidence 45567788899999999999999999999 55655 5689999999999999999999999999999
Q ss_pred CCcHHHHHH--HHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 266 PAHVKGLYR--RGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 266 p~~~ka~~r--~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
|.+..++.. ++..+..+|++++|+..+.++..+
T Consensus 112 p~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 146 (166)
T 1a17_A 112 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSV 146 (166)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHcccchHHH
Confidence 999988844 555588889999999999887654
No 166
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.86 E-value=1.5e-08 Score=84.25 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=92.2
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
...+..+...|..++..|+|.+|+..|.+++....... + ......++.++|.++..+|+|++|+..+.+++
T Consensus 6 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 76 (164)
T 3ro3_A 6 AAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--D-------KAAERIAYSNLGNAYIFLGEFETASEYYKKTL 76 (164)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhC--C-------chHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 34678889999999999999999999999998654321 1 12335689999999999999999999999999
Q ss_pred HhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 263 DANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 263 ~~dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
.+.+.. ..+++++|.++..+|++++|+..|++++++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~ 119 (164)
T 3ro3_A 77 LLARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIA 119 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 876543 7789999999999999999999999999874
No 167
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.85 E-value=2.7e-08 Score=101.99 Aligned_cols=115 Identities=14% Similarity=0.097 Sum_probs=91.2
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccC--CCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV--NPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~--~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
.+...|..+++.|++++|+..|.+++...... .|. ....++.+++.++.+.|++++|+..++++++++
T Consensus 477 ~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~p~----------~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 546 (597)
T 2xpi_A 477 LLNELGVVAFNKSDMQTAINHFQNALLLVKKTQSNEK----------PWAATWANLGHAYRKLKMYDAAIDALNQGLLLS 546 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCSG----------GGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhhhccccchh----------hHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC
Confidence 34555666666666666666666666532211 111 125689999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
|+++.+++.+|.+|..+|++++|+..|+++++++|++ ..+...|..+
T Consensus 547 p~~~~~~~~l~~~~~~~g~~~~A~~~~~~~l~~~p~~-~~~~~~l~~~ 593 (597)
T 2xpi_A 547 TNDANVHTAIALVYLHKKIPGLAITHLHESLAISPNE-IMASDLLKRA 593 (597)
T ss_dssp SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCCCC-hHHHHHHHHH
Confidence 9999999999999999999999999999999999998 5666666544
No 168
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.85 E-value=1.1e-08 Score=102.42 Aligned_cols=77 Identities=12% Similarity=0.108 Sum_probs=71.0
Q ss_pred HHHHHHHHHHH---cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 237 LHLNVAACLLK---LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 237 ~~~N~a~~~~k---l~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
++.++|.++.. +|++++|+..+.+++.++|+++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+
T Consensus 414 ~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~~-~~~~~~~~~~ 492 (514)
T 2gw1_A 414 PLVGKATLLTRNPTVENFIEATNLLEKASKLDPRSEQAKIGLAQMKLQQEDIDEAITLFEESADLARTM-EEKLQAITFA 492 (514)
T ss_dssp HHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSH-HHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhCcccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcccc-HHHHHHHHHH
Confidence 89999999999 9999999999999999999999999999999999999999999999999999997 5666655444
Q ss_pred H
Q 015006 314 K 314 (414)
Q Consensus 314 ~ 314 (414)
.
T Consensus 493 ~ 493 (514)
T 2gw1_A 493 E 493 (514)
T ss_dssp H
T ss_pred H
Confidence 3
No 169
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=98.84 E-value=3.3e-08 Score=98.44 Aligned_cols=122 Identities=11% Similarity=0.101 Sum_probs=96.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...-..+.++|+|.+|+..|.++|......-+.+ +.....++.|+|.+|..+|+|++|+..+.++|.+.
T Consensus 287 ~~~ll~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~-------h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~ 359 (429)
T 3qwp_A 287 VQESLKKIEELKAHWKWEQVLAMCQAIISSNSERLPDI-------NIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPY 359 (429)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTT-------SHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhccCcCCcc-------chHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhH
Confidence 34444555567788999999999999998765544444 44567899999999999999999999999999763
Q ss_pred --------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----CCCCHHHHHHHHHHHHH
Q 015006 266 --------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----DKSSEPDATAALSKLKK 315 (414)
Q Consensus 266 --------p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l-----~P~n~~~~~~~l~~~~~ 315 (414)
|.-+..++++|.+|..+|++++|+..|++|+++ -|++ +.+...+..+..
T Consensus 360 ~~~lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~lG~~H-p~~~~~~~~l~~ 421 (429)
T 3qwp_A 360 RIFFPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTHGREH-SLIEDLILLLEE 421 (429)
T ss_dssp HHHSCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTS-HHHHHHHHHHHH
T ss_pred HHHcCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcCCCC-hHHHHHHHHHHH
Confidence 445778999999999999999999999999986 5666 445544444433
No 170
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.84 E-value=7.6e-09 Score=97.12 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=89.9
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+|+.++... +.+. .....+++|+|.+|.++|+|++|+.++.+++.+
T Consensus 154 ~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~-~~~~-------~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~ 225 (293)
T 2qfc_A 154 NLYIENAIANIYAENGYLKKGIDLFEQILKQLEAL-HDNE-------EFDVKVRYNHAKALYLDSRYEESLYQVNKAIEI 225 (293)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhc-Cccc-------cchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46788899999999999999999999999765432 2221 122368999999999999999999999999988
Q ss_pred CCC------cHHHHHHHHHHHHHcCCHHHH-HHHHHHHHhhC
Q 015006 265 NPA------HVKGLYRRGMAYMALGEFEEA-QRDFEMMMKVD 299 (414)
Q Consensus 265 dp~------~~ka~~r~g~a~~~l~~~~eA-~~~~~~al~l~ 299 (414)
.+. .+.+++++|.++..+|++++| ...|++|+.+.
T Consensus 226 ~~~~~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al~~~ 267 (293)
T 2qfc_A 226 SCRINSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKASFFF 267 (293)
T ss_dssp HHHTTBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHhcCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 643 278999999999999999999 77899999774
No 171
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=98.84 E-value=2.5e-09 Score=87.86 Aligned_cols=46 Identities=13% Similarity=0.143 Sum_probs=43.0
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEEEe
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHLIQ 47 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~~~ 47 (414)
||.+|++||++.|.|||++|||..+.+.||||++|+|+|+|+++.+
T Consensus 78 ~l~gm~~Ge~~~~~ip~~~aYG~~g~~~Ip~~~~l~f~vel~~i~~ 123 (125)
T 4dip_A 78 GLKGMCVGEKRKLIIPPALGYGKEGKGKIPPESTLIFNIDLLEIRN 123 (125)
T ss_dssp HSTTCCTTCEEEEEECGGGTTTTTCBTTBCTTCCEEEEEEEEEEEC
T ss_pred HHhCCCCCCEEEEEEChHHhcCCCCCCCCCCCCeEEEEEEEEEEEc
Confidence 7899999999999999999999977779999999999999999753
No 172
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=98.84 E-value=2.2e-09 Score=90.44 Aligned_cols=45 Identities=24% Similarity=0.463 Sum_probs=41.8
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCC-CCCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSP-LMPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~-~~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||++.|.|||++|||.. .++.||||++|+|+|+|+++.
T Consensus 97 ~l~gm~~Ge~~~v~ipp~~aYG~~g~~~~Ipp~~~L~f~VeL~~ik 142 (144)
T 3o5e_A 97 GVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 142 (144)
T ss_dssp HHTTCCBTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred HHhCCCCCCEEEEEEChHHCcCCCCCCCCcCCCCeEEEEEEEEEec
Confidence 689999999999999999999985 458999999999999999985
No 173
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=98.84 E-value=1.4e-08 Score=95.22 Aligned_cols=124 Identities=14% Similarity=0.104 Sum_probs=96.0
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA- 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~- 264 (414)
+.-+...|..++..++|.+|+..|.+|+....... + ......+++|+|.+|..+|+|++|+.++.+|+++
T Consensus 115 ~~~~~~l~~~~~~~~~~~~Ai~~~~~al~~~~~~~--~-------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~ 185 (293)
T 3u3w_A 115 LQWQYYVAAYVLKKVDYEYCILELKKLLNQQLTGI--D-------VYQNLYIENAIANIYAENGYLKKGIDLFEQILKQL 185 (293)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHHTCCCCS--C-------TTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHhcccc--c-------HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 44555688888999999999999999998432211 1 0123568999999999999999999999999952
Q ss_pred ------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHHHH
Q 015006 265 ------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS-----EPDATAALSKLKKQRQ 318 (414)
Q Consensus 265 ------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n-----~~~~~~~l~~~~~~~~ 318 (414)
.+..+.+++++|.+|..+|+|++|+..|++|+++.+.. ...+...+..+...+.
T Consensus 186 ~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~~~~~g 250 (293)
T 3u3w_A 186 EALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKLE 250 (293)
T ss_dssp HHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCTTHHHHHHHHHHHHHHTT
T ss_pred HhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHhC
Confidence 23446799999999999999999999999999986432 1456666666665554
No 174
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=98.84 E-value=6.5e-08 Score=76.00 Aligned_cols=99 Identities=11% Similarity=0.135 Sum_probs=82.1
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...++++|.+++..++|++|+..+.+++..+|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a~~~ 82 (118)
T 1elw_A 4 VNELKEKGNKALSVGNIDDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKPDW-GKGYSRKAAAL 82 (118)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhCccc-HHHHHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999997 66777777766
Q ss_pred HHHHHHHHHHHHHHHhhccCC
Q 015006 315 KQRQEVESKARKQFKGLFDKK 335 (414)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~ 335 (414)
.......+ ....+.+.....
T Consensus 83 ~~~~~~~~-A~~~~~~~~~~~ 102 (118)
T 1elw_A 83 EFLNRFEE-AKRTYEEGLKHE 102 (118)
T ss_dssp HHTTCHHH-HHHHHHHHHTTC
T ss_pred HHHhhHHH-HHHHHHHHHHcC
Confidence 55443332 344455554443
No 175
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.83 E-value=1e-08 Score=99.67 Aligned_cols=109 Identities=14% Similarity=0.073 Sum_probs=96.0
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+...|..++..|+|.+|+..|.+|+....... + ......++.|+|.||..+|+|++|+.++.+++.
T Consensus 180 ~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~ 250 (378)
T 3q15_A 180 RTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQ--N-------DRFIAISLLNIANSYDRSGDDQMAVEHFQKAAK 250 (378)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcC--C-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4577888999999999999999999999999654331 1 123467899999999999999999999999999
Q ss_pred -----hCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 264 -----ANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 264 -----~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.+|..+.+++.+|.++..+|++++|+..|++|+++.+.
T Consensus 251 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 293 (378)
T 3q15_A 251 VSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITA 293 (378)
T ss_dssp HHHHHCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCT
T ss_pred HHHhhCChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999999999998553
No 176
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.82 E-value=2.1e-08 Score=97.46 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=96.4
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
...+..+...|..++..|+|..|+..|.+|+.++..... . ......+++|+|.+|..+|+|++|+.++.+|+
T Consensus 140 ~~~a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~~~~~-~-------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al 211 (383)
T 3ulq_A 140 IEKAEFFFKMSESYYYMKQTYFSMDYARQAYEIYKEHEA-Y-------NIRLLQCHSLFATNFLDLKQYEDAISHFQKAY 211 (383)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCST-T-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCcc-c-------hHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 345778889999999999999999999999997654321 1 12235788999999999999999999999999
Q ss_pred HhCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-----C-CCCHHHHHHHHHHHHHH
Q 015006 263 DANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKV-----D-KSSEPDATAALSKLKKQ 316 (414)
Q Consensus 263 ~~dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l-----~-P~n~~~~~~~l~~~~~~ 316 (414)
++.+.. +.+++++|.++..+|++++|+..|++|+++ + |.. ..+...+..+...
T Consensus 212 ~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~~l~~~~~~ 276 (383)
T 3ulq_A 212 SMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPSL-PQAYFLITQIHYK 276 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGGH-HHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchhH-HHHHHHHHHHHHH
Confidence 875433 358999999999999999999999999984 4 443 4555555555443
No 177
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.82 E-value=1.1e-08 Score=97.01 Aligned_cols=107 Identities=10% Similarity=0.033 Sum_probs=89.2
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..+.. |+|.+|+..|.+|+.+..... + ......++.|+|.+|.++|+|++|+.++.+++.+
T Consensus 115 ~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~~~~~~~--~-------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 184 (307)
T 2ifu_A 115 AAMALDRAGKLMEP-LDLSKAVHLYQQAAAVFENEE--R-------LRQAAELIGKASRLLVRQQKFDEAAASLQKEKSM 184 (307)
T ss_dssp HHHHHHHHHHHHTT-TCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhCC--C-------hhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 46677788888888 999999999999998654211 1 1123578999999999999999999999999998
Q ss_pred CCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 265 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 265 dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
.|.+ ..+++.+|.++..+|++++|+..|++++ ++|.+
T Consensus 185 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~~p~~ 227 (307)
T 2ifu_A 185 YKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-SIPGF 227 (307)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-TSTTS
T ss_pred HHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-CCCCC
Confidence 7643 4588999999999999999999999999 99975
No 178
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.82 E-value=2.4e-08 Score=97.34 Aligned_cols=104 Identities=16% Similarity=0.241 Sum_probs=93.6
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+...|..++..|+|.+|+..|.+++. ..|.+. .....++.++|.+|+.+|+|++|+..+.+++.
T Consensus 46 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~----~~~~~~-------~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 114 (411)
T 4a1s_A 46 SMCLELALEGERLCNAGDCRAGVAFFQAAIQ----AGTEDL-------RTLSAIYSQLGNAYFYLGDYNKAMQYHKHDLT 114 (411)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSCH-------HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH----hcccCh-------hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 4577888999999999999999999999999 455552 23356899999999999999999999999999
Q ss_pred h------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 264 A------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 264 ~------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
+ +|..+.+++.+|.++..+|++++|+..|++++++
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 155 (411)
T 4a1s_A 115 LAKSMNDRLGEAKSSGNLGNTLKVMGRFDEAAICCERHLTL 155 (411)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHccCchHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 8 6788999999999999999999999999999998
No 179
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=98.81 E-value=4.5e-09 Score=89.57 Aligned_cols=47 Identities=19% Similarity=0.244 Sum_probs=42.6
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC--CCCCCCCCeeeEEEEeeEEEee
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL--MPVVEGCEEVHFEVELVHLIQV 48 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~--~~~ip~~~~l~~~vel~~~~~~ 48 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++...
T Consensus 102 aL~gMk~Ge~~~v~IP~~~aYG~~g~~~~~IPp~stLiF~VeL~~i~~~ 150 (157)
T 2jwx_A 102 SVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDL 150 (157)
T ss_dssp HTTTSCTTCEEEEEECGGGTTTTTCCSSSCCCTTCCEEEEEEEEEEEEC
T ss_pred HHcCCCCCCEEEEEECchhcCCcccccCCCcCCCCeEEEEEEEEEEEcc
Confidence 7899999999999999999999855 4789999999999999998653
No 180
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=98.80 E-value=2.6e-08 Score=96.83 Aligned_cols=108 Identities=10% Similarity=0.103 Sum_probs=94.5
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+...|..+...|+|.+|+..|.+|+....... + ......++.|+|.||..+|+|++|+.++.+|++
T Consensus 182 ~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~ 252 (383)
T 3ulq_A 182 RLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEK--Q-------PQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIA 252 (383)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcC--C-------hHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3577888999999999999999999999999655331 1 223467899999999999999999999999999
Q ss_pred -----hC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 015006 264 -----AN-PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 300 (414)
Q Consensus 264 -----~d-p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P 300 (414)
.+ |..+.+++++|.++..+|++++|+..|++|+++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 295 (383)
T 3ulq_A 253 VFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQ 295 (383)
T ss_dssp HHHHTTCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhhccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 46 88899999999999999999999999999999843
No 181
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=98.80 E-value=9.2e-09 Score=97.43 Aligned_cols=109 Identities=10% Similarity=0.021 Sum_probs=91.2
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+.+.|+.+...|+|.+|+..|.+|+.+..... + ......++.|+|.+|.. ++|++|+.++.+|+.
T Consensus 74 ~~a~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g--~-------~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~Al~ 143 (307)
T 2ifu_A 74 HAAKAFEQAGMMLKDLQRMPEAVQYIEKASVMYVENG--T-------PDTAAMALDRAGKLMEP-LDLSKAVHLYQQAAA 143 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTT--C-------HHHHHHHHHHHHHHHTT-TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcC--C-------HHHHHHHHHHHHHHHHc-CCHHHHHHHHHHHHH
Confidence 3466788889999999999999999999998654221 1 11235689999999999 999999999999999
Q ss_pred hCCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 264 ANPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 264 ~dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+.|.. ..+++++|.++..+|+|++|+..|++++++.|.+
T Consensus 144 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~ 188 (307)
T 2ifu_A 144 VFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEM 188 (307)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc
Confidence 87643 6899999999999999999999999999997644
No 182
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=98.79 E-value=3.7e-09 Score=83.58 Aligned_cols=47 Identities=26% Similarity=0.304 Sum_probs=42.2
Q ss_pred CccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEEEe
Q 015006 1 MGIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHLIQ 47 (414)
Q Consensus 1 ~~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~~~ 47 (414)
.||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++.+
T Consensus 51 ~~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~~ 98 (102)
T 2pbc_A 51 QGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIER 98 (102)
T ss_dssp TTSTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEGG
T ss_pred HHHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEecc
Confidence 37899999999999999999999854 568999999999999999754
No 183
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.78 E-value=2.4e-08 Score=92.87 Aligned_cols=110 Identities=23% Similarity=0.295 Sum_probs=93.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++..+......+ ......++.++|.++..+|++++|+..+.+++.+
T Consensus 152 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 224 (311)
T 3nf1_A 152 VAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPD-------DPNVAKTKNNLASCYLKQGKFKQAETLYKEILTR 224 (311)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTT-------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCC-------CHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456677889999999999999999999999654432222 1223678999999999999999999999999974
Q ss_pred -------------------------------------------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 265 -------------------------------------------------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMM 295 (414)
Q Consensus 265 -------------------------------------------------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~a 295 (414)
.|..+.+++.+|.+|..+|++++|+..|++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a 304 (311)
T 3nf1_A 225 AHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETLEEAA 304 (311)
T ss_dssp HHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 4667899999999999999999999999999
Q ss_pred HhhCCC
Q 015006 296 MKVDKS 301 (414)
Q Consensus 296 l~l~P~ 301 (414)
+++.|.
T Consensus 305 l~l~~~ 310 (311)
T 3nf1_A 305 MRSRKQ 310 (311)
T ss_dssp HHHHC-
T ss_pred HHHhhc
Confidence 999875
No 184
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=98.78 E-value=5e-09 Score=86.46 Aligned_cols=45 Identities=24% Similarity=0.463 Sum_probs=41.6
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCC-CCCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSP-LMPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~-~~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||++.|.|||++|||.. .++.||||++|+|+|+|+++.
T Consensus 81 ~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~Ip~~~~l~f~vel~~i~ 126 (128)
T 3o5q_A 81 GVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDFK 126 (128)
T ss_dssp HHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred HHhcCCCCCEEEEEEChHHcCCCCCCCCCcCCCCEEEEEEEEEEec
Confidence 689999999999999999999985 457999999999999999985
No 185
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=98.77 E-value=6.5e-08 Score=78.02 Aligned_cols=84 Identities=17% Similarity=0.234 Sum_probs=76.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...+.++|.+++..++|.+|+..+.+++..+|.+..+++.+|.++..+|++++|+..|+++++++|.+ ..+...+..+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~-~~~~~~la~~~ 94 (133)
T 2lni_A 16 ALMVKNKGNECFQKGDYPQAMKHYTEAIKRNPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLEPTF-IKGYTRKAAAL 94 (133)
T ss_dssp HHHHHHHHHHHHHTTCSHHHHHHHHHHHTTCTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCc-hHHHHHHHHHH
Confidence 67899999999999999999999999999999999999999999999999999999999999999997 66777777766
Q ss_pred HHHHH
Q 015006 315 KQRQE 319 (414)
Q Consensus 315 ~~~~~ 319 (414)
.....
T Consensus 95 ~~~~~ 99 (133)
T 2lni_A 95 EAMKD 99 (133)
T ss_dssp HHTTC
T ss_pred HHHhh
Confidence 55443
No 186
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=98.77 E-value=7.3e-08 Score=77.80 Aligned_cols=99 Identities=20% Similarity=0.251 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH---HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH--HHHHHHHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDANPAHV---KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE--PDATAALS 311 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~---ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~--~~~~~~l~ 311 (414)
.++++|.+++..|+|.+|+..+.+++..+|+++ .+++.+|.++..+|+|++|+..|+++++++|++. ..+...+.
T Consensus 4 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~la 83 (129)
T 2xev_A 4 TAYNVAFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRYPTHDKAAGGLLKLG 83 (129)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHCCCCcccHHHHHHHH
Confidence 567899999999999999999999999999998 8999999999999999999999999999999873 34555666
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCC
Q 015006 312 KLKKQRQEVESKARKQFKGLFDKKP 336 (414)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (414)
.+........ +....+.......+
T Consensus 84 ~~~~~~g~~~-~A~~~~~~~~~~~p 107 (129)
T 2xev_A 84 LSQYGEGKNT-EAQQTLQQVATQYP 107 (129)
T ss_dssp HHHHHTTCHH-HHHHHHHHHHHHST
T ss_pred HHHHHcCCHH-HHHHHHHHHHHHCC
Confidence 6654433322 33445555554443
No 187
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=98.76 E-value=1.1e-07 Score=89.12 Aligned_cols=121 Identities=13% Similarity=0.080 Sum_probs=91.4
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH---Hh
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL---DA 264 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al---~~ 264 (414)
.+...|..+...|+|.+|+..|.+|+......... .....+++|+|.+|..+|+|++|+.++.+|+ +.
T Consensus 117 ~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~~~~~---------~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~ 187 (293)
T 2qfc_A 117 WQYYVAAYVLKKVDYEYCILELKKLLNQQLTGIDV---------YQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEA 187 (293)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHHHHHTTCCCSSCT---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcCCch---------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 34456777788889999999999998754321111 1135689999999999999999999999999 44
Q ss_pred CCCc----HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC-----HHHHHHHHHHHHHHH
Q 015006 265 NPAH----VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS-----EPDATAALSKLKKQR 317 (414)
Q Consensus 265 dp~~----~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n-----~~~~~~~l~~~~~~~ 317 (414)
.|++ +.+++++|.+|..+|+|++|+..|++|+++.+.. ...+...+..+...+
T Consensus 188 ~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~~~~~~~~~~~~~lg~~y~~~ 249 (293)
T 2qfc_A 188 LHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRINSMALIGQLYYQRGECLRKL 249 (293)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTBCSSHHHHHHHHHHHHHHT
T ss_pred cCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHc
Confidence 5553 3799999999999999999999999999885421 134555555555444
No 188
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=98.76 E-value=3.6e-09 Score=88.05 Aligned_cols=45 Identities=27% Similarity=0.389 Sum_probs=41.0
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++.
T Consensus 88 aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i~ 133 (134)
T 3b7x_A 88 GLLSMRRGELARFLFKPNYAYGTLGCPPLIPPNTTVLFEIELLDFL 133 (134)
T ss_dssp HHHTCEETCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEC
T ss_pred HHhCCCCCCEEEEEECHHHCcCCCCCCCCcCcCCeEEEEEEEEEEe
Confidence 6889999999999999999999854 56799999999999999874
No 189
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=98.76 E-value=2.1e-08 Score=99.76 Aligned_cols=119 Identities=11% Similarity=0.036 Sum_probs=95.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcC--CHHHHHHHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG--ECRKSIEACNKVLD 263 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~--~~~~A~~~~~~al~ 263 (414)
+..+.+.|..++..|+|.+|+..|.+++.+........ ......++.|+|.++++++ +|++|+.++.+|++
T Consensus 94 ~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~-------~~~~~~~~~~~g~~~~~~~~~~y~~A~~~~~kal~ 166 (472)
T 4g1t_A 94 LVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPY-------RIESPELDCEEGWTRLKCGGNQNERAKVCFEKALE 166 (472)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSS-------CCCCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhccccc-------chhhHHHHHHHHHHHHHHccccHHHHHHHHHHHHH
Confidence 45667889999999999999999999998655432211 1122568889998888765 69999999999999
Q ss_pred hCCCcHHHHHHHHHHHHH---cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 015006 264 ANPAHVKGLYRRGMAYMA---LGEFEEAQRDFEMMMKVDKSSEPDATAALSK 312 (414)
Q Consensus 264 ~dp~~~ka~~r~g~a~~~---l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~ 312 (414)
++|+++.+++.+|.++.. .+++++|+..|++|++++|++ ..+...+..
T Consensus 167 ~~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~al~l~p~~-~~~~~~l~~ 217 (472)
T 4g1t_A 167 KKPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQAIRLNPDN-QYLKVLLAL 217 (472)
T ss_dssp HSTTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHHHHHCSSC-HHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhhcCCcc-hHHHHHHHH
Confidence 999999999999998655 577789999999999999998 556655543
No 190
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=98.76 E-value=4.7e-09 Score=106.12 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=89.3
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..+++.|+|.+|+..|++|+. +.|.+ ..+++|+|.+|.++|+|++|+..+.++++++
T Consensus 40 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----l~p~~-----------~~~~~~lg~~~~~~g~~~eA~~~~~~al~~~ 104 (477)
T 1wao_1 40 AIYYGNRSLAYLRTECYGYALGDATRAIE----LDKKY-----------IKGYYRRAASNMALGKFRAALRDYETVVKVK 104 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----SCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 56678899999999999999999999999 67776 6799999999999999999999999999999
Q ss_pred CCcHHHHHHHHHH--HHHcCCHHHHHHHHH-----------HHHhhCCCC
Q 015006 266 PAHVKGLYRRGMA--YMALGEFEEAQRDFE-----------MMMKVDKSS 302 (414)
Q Consensus 266 p~~~ka~~r~g~a--~~~l~~~~eA~~~~~-----------~al~l~P~n 302 (414)
|++..+++.++.+ +..+|++++|++.++ +++.++|+.
T Consensus 105 p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~al~~~~~~ 154 (477)
T 1wao_1 105 PHDKDAKMKYQECNKIVKQKAFERAIAGDEHKRSVVDSLDIESMTIEDEY 154 (477)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHCCC------CCSTTTCCTTSSCCCCTTC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHhccccccchhHhhhhhhhccccccc
Confidence 9999999999999 888999999999999 888887754
No 191
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=98.76 E-value=6.9e-08 Score=98.93 Aligned_cols=115 Identities=17% Similarity=0.099 Sum_probs=92.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..+++.|++.+|+..|.+++. ..|.+ ..++++++.+|.+.|++++|+..+.+++...
T Consensus 373 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~----~~~~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 373 AVTWLAVGIYYLCVNKISEARRYFSKSST----MDPQF-----------GPAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 33455677778888888888888888887 45554 5678889999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
|.++.+++.+|.++...|++++|+..|+++++++|.+ ..+...+..+...
T Consensus 438 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~-~~~~~~l~~~~~~ 487 (597)
T 2xpi_A 438 QGTHLPYLFLGMQHMQLGNILLANEYLQSSYALFQYD-PLLLNELGVVAFN 487 (597)
T ss_dssp TTCSHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887 5566555555443
No 192
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=98.75 E-value=2.7e-08 Score=82.60 Aligned_cols=108 Identities=22% Similarity=0.244 Sum_probs=91.0
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++....... + ......++.|+|.++..+++|++|+..+.+++.+
T Consensus 48 ~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~--~-------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 118 (164)
T 3ro3_A 48 ERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQLK--D-------RAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAI 118 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhC--C-------cHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 456778899999999999999999999999654332 1 1233668999999999999999999999999977
Q ss_pred CC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 265 NP------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 265 dp------~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.+ ..+.+++.+|.++..+|++++|+..|++++++...
T Consensus 119 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 161 (164)
T 3ro3_A 119 AQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISRE 161 (164)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT
T ss_pred HHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 42 23678999999999999999999999999988544
No 193
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=98.75 E-value=6.3e-09 Score=85.97 Aligned_cols=46 Identities=22% Similarity=0.353 Sum_probs=41.8
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCC-CCCCCCCCCeeeEEEEeeEEEe
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSP-LMPVVEGCEEVHFEVELVHLIQ 47 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~-~~~~ip~~~~l~~~vel~~~~~ 47 (414)
||.+|++||++.|.|||++|||.. .++.||||++|+|+|+|+++..
T Consensus 81 ~l~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~vel~~v~~ 127 (129)
T 2vn1_A 81 CVSSMRKNEKCLVRIESMYGYGDEGCGESIPGNSVLLFEIELLSFRE 127 (129)
T ss_dssp HHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEEC
T ss_pred HHhCCCCCCEEEEEEChHHcCCCCCCCCCcCCCCeEEEEEEEEEEec
Confidence 689999999999999999999985 4578999999999999999863
No 194
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=98.75 E-value=7.3e-09 Score=84.20 Aligned_cols=45 Identities=20% Similarity=0.235 Sum_probs=41.1
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++.
T Consensus 72 ~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v~ 117 (118)
T 2awg_A 72 SVPLMDVGETAMVTADSKYCYGPQGRSPYIPPHAALCLEVTLKTAV 117 (118)
T ss_dssp HGGGSCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEEE
T ss_pred HHhCCCCCCEEEEEEChHHccCCCCCCCccCCCCeEEEEEEEEEec
Confidence 6899999999999999999999854 57899999999999999864
No 195
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.75 E-value=3.9e-08 Score=91.83 Aligned_cols=105 Identities=18% Similarity=0.254 Sum_probs=91.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA- 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~- 264 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+. .....++.++|.+++.+|+|++|+..+.+++.+
T Consensus 5 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~----~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 73 (338)
T 3ro2_A 5 CLELALEGERLCKSGDCRAGVSFFEAAVQ----VGTEDL-------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 73 (338)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHh----hCcccH-------HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 45677889999999999999999999999 455552 233568999999999999999999999999987
Q ss_pred -----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 265 -----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 265 -----dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.|..+.+++.+|.++..+|++++|+..|++++++.|.
T Consensus 74 ~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~ 115 (338)
T 3ro2_A 74 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 115 (338)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hcccccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 5566889999999999999999999999999998653
No 196
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=98.75 E-value=5.6e-09 Score=84.98 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=40.2
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCC--CCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMP--VVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~--~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||++|||..+.+ .||||++|+|+|+|+++
T Consensus 73 ~l~gm~~Ge~~~v~ip~~~aYG~~g~~~~~Ip~~~~l~f~veL~~i 118 (119)
T 3kz7_A 73 ALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNTKLIFEVELVDI 118 (119)
T ss_dssp HHTTCCTTCEEEEEECGGGTTCTTCBGGGTBCTTCCEEEEEEEEEE
T ss_pred HHhCCCCCCEEEEEECcHHhcCCCCCCCCccCcCCeEEEEEEEEEe
Confidence 689999999999999999999996543 79999999999999985
No 197
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.75 E-value=3.1e-08 Score=92.04 Aligned_cols=125 Identities=15% Similarity=0.180 Sum_probs=99.7
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++.........+ ......++.++|.++..+|+|++|+..+.+++.+
T Consensus 68 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 140 (311)
T 3nf1_A 68 VATMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKD-------HPAVAATLNNLAVLYGKRGKYKEAEPLCKRALEI 140 (311)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTT-------CHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCC-------ChHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 466778899999999999999999999998653221111 1234678999999999999999999999999987
Q ss_pred C--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--------CCCCHHHHHHHHHHHHHHH
Q 015006 265 N--------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV--------DKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 265 d--------p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l--------~P~n~~~~~~~l~~~~~~~ 317 (414)
. |....+++.+|.++..+|++++|+..|++++++ .|.. ..+...+..+....
T Consensus 141 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~-~~~~~~la~~~~~~ 208 (311)
T 3nf1_A 141 REKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRALEIYQTKLGPDDPNV-AKTKNNLASCYLKQ 208 (311)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHTSCTTCHHH-HHHHHHHHHHHHHH
T ss_pred HHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCHHH-HHHHHHHHHHHHHc
Confidence 4 667889999999999999999999999999998 4432 34455555554433
No 198
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=98.74 E-value=5.3e-09 Score=102.64 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=70.4
Q ss_pred CCCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCCCC
Q 015006 74 PLHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANV 153 (414)
Q Consensus 74 p~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~i 153 (414)
+..||.|+|||+|+. +|+.| +++ .+.|+.|.+|.|.+++||+.+|.+|++||+..|.++....|+..+.
T Consensus 161 ~~~gD~V~i~y~g~~---dG~~f-d~~---~~~~~~~~lG~g~~ipgfee~L~Gmk~Ge~~~v~v~fp~dy~~~~l---- 229 (392)
T 1t11_A 161 AENGKRVSIDFVGSI---DGVEF-EGG---KAENFPLEMGAGRMIPGFEDGIVGKTKGMEFVIDVTFPEDYHAENL---- 229 (392)
T ss_dssp CCTTCEEEEEEEEES---SSSCC-TTC---EEEEEEEETTSCCBSTTSGGGTTTCCSSCCCCEEEECCTTCSCTTT----
T ss_pred CCCCCEEEEEEEEEE---CCEEc-cCC---CccceEEEecCCCcchhHHHHhCCCCCCCEEEEEEeCccccccCCC----
Confidence 468999999999994 48888 444 2569999999999999999999999999999999963345665432
Q ss_pred CCCcceEEEEEEcccCC
Q 015006 154 PEGAHIQWEIELLGFEK 170 (414)
Q Consensus 154 p~~~~l~~eieL~~~~~ 170 (414)
+|.++.|+|+|+++..
T Consensus 230 -aGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 230 -KGKAAKFAIKVNKVEA 245 (392)
T ss_dssp -SSCEEEECCCEEEEEE
T ss_pred -CCCeEEEEEEEEEEEc
Confidence 6789999999998865
No 199
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=98.74 E-value=7.5e-09 Score=83.42 Aligned_cols=44 Identities=23% Similarity=0.320 Sum_probs=40.5
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++
T Consensus 68 ~l~gm~~Ge~~~v~ip~~~ayG~~~~~~~Ip~~~~l~f~vel~~i 112 (113)
T 1yat_A 68 GIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELLKV 112 (113)
T ss_dssp HGGGCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred HHhCCCCCCEEEEEECHHHCcCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 6899999999999999999999854 5679999999999999986
No 200
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=98.73 E-value=7.9e-09 Score=82.41 Aligned_cols=44 Identities=20% Similarity=0.385 Sum_probs=40.4
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++
T Consensus 62 ~l~gm~~Ge~~~~~ip~~~ayG~~~~~~~Ip~~~~l~f~v~l~~v 106 (107)
T 2ppn_A 62 GVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKL 106 (107)
T ss_dssp HHTTCCTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEEE
T ss_pred HHhCCCCCCEEEEEECHHHccCCCCCCCCcCCCCeEEEEEEEEEe
Confidence 6899999999999999999999854 5789999999999999885
No 201
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=98.72 E-value=9.1e-09 Score=88.63 Aligned_cols=45 Identities=11% Similarity=0.208 Sum_probs=41.6
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++.
T Consensus 97 aL~gMk~Ge~~~~~Ip~~laYG~~g~~~~Ipp~s~LiF~VeL~~i~ 142 (167)
T 1jvw_A 97 ALQLMREGDRWRLFIPYDLAYGVTGGGGMIPPYSPLEFDVELISIK 142 (167)
T ss_dssp HHTTCCTTCEEEEEECGGGTTTTTCSSSSSCTTCCEEEEEEEEEEG
T ss_pred HHcCCCCCCEEEEEECchhhCCCCCCCCCcCCCCeEEEEEEEEEEE
Confidence 7899999999999999999999854 57899999999999999975
No 202
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.72 E-value=5.4e-08 Score=94.06 Aligned_cols=105 Identities=18% Similarity=0.254 Sum_probs=92.4
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh-
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA- 264 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~- 264 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+. .....++.++|.+++.+|+|.+|+..+.+++.+
T Consensus 9 ~~~l~~~g~~~~~~g~~~~A~~~~~~al~----~~~~~~-------~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 77 (406)
T 3sf4_A 9 CLELALEGERLCKSGDCRAGVSFFEAAVQ----VGTEDL-------KTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLA 77 (406)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCCSCH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHh----cCcccH-------HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 66677889999999999999999999999 455552 234578999999999999999999999999887
Q ss_pred -----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 265 -----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 265 -----dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.|..+.+++.+|.++..+|++++|+..|++++++.|.
T Consensus 78 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 119 (406)
T 3sf4_A 78 RTIGDQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRE 119 (406)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HhccccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHh
Confidence 4566889999999999999999999999999998664
No 203
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=98.71 E-value=6.6e-08 Score=93.96 Aligned_cols=129 Identities=12% Similarity=0.042 Sum_probs=101.7
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
...+..+...|..++..|++..|+..|.+|+.++...... ......+++|+|.+|..+|+|++|+..+.+|+
T Consensus 138 ~~~a~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~--------~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al 209 (378)
T 3q15_A 138 IEKAEFHFKVAEAYYHMKQTHVSMYHILQALDIYQNHPLY--------SIRTIQSLFVIAGNYDDFKHYDKALPHLEAAL 209 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTC--------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHhCCCc--------hhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 3457777888888888889999999999988865532211 11246789999999999999999999999999
Q ss_pred HhCC------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-----hCCCCHHHHHHHHHHHHHHHHHH
Q 015006 263 DANP------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMK-----VDKSSEPDATAALSKLKKQRQEV 320 (414)
Q Consensus 263 ~~dp------~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~-----l~P~n~~~~~~~l~~~~~~~~~~ 320 (414)
++.+ ..+.+++++|.++..+|++++|+..|++|++ .+|.. ..+...+..+.....+.
T Consensus 210 ~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~-~~~~~~la~~~~~~g~~ 277 (378)
T 3q15_A 210 ELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPDLL-PKVLFGLSWTLCKAGQT 277 (378)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGGGH-HHHHHHHHHHHHHTTCH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCChhH-HHHHHHHHHHHHHCCCH
Confidence 8743 2367899999999999999999999999999 66665 56666777766554433
No 204
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.71 E-value=5.4e-08 Score=84.91 Aligned_cols=106 Identities=11% Similarity=0.121 Sum_probs=91.0
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++..+..... ......++.|+|.++..+|+|++|+..+.+++.+
T Consensus 25 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 95 (203)
T 3gw4_A 25 ASGARFMLGYVYAFMDRFDEARASFQALQQQAQKSGD---------HTAEHRALHQVGMVERMAGNWDAARRCFLEEREL 95 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCC---------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 4677888999999999999999999999997654321 1234678999999999999999999999999998
Q ss_pred ---CC----CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 265 ---NP----AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 265 ---dp----~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
.+ ....+++++|.++..+|++++|+..|++++.+.
T Consensus 96 ~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~ 137 (203)
T 3gw4_A 96 LASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYA 137 (203)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 33 346789999999999999999999999999874
No 205
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.70 E-value=8.8e-09 Score=85.76 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=43.6
Q ss_pred CccccCCcCcEEEEEEcCCCcCCCCC--CCCCCCCCeeeEEEEeeEEEeee
Q 015006 1 MGIGTMTREEKAVIYVTSQYLTPSPL--MPVVEGCEEVHFEVELVHLIQVR 49 (414)
Q Consensus 1 ~~~~~m~~Ge~~~~~i~~~~~~g~~~--~~~ip~~~~l~~~vel~~~~~~~ 49 (414)
.||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++....
T Consensus 75 ~~L~gm~~Ge~~~v~ip~~~aYG~~~~~~~~Ip~~~~l~f~vel~~v~~~~ 125 (135)
T 2d9f_A 75 LSVPLMDVGETAMVTADSKYCYGPQGSRSPYIPPHAALCLEVTLKTAVDRP 125 (135)
T ss_dssp TTGGGSCTTCEEEEEECHHHHTCTTCCSSSCCCTTCCEEEEEEEEEEESSC
T ss_pred HHHhCCCCCCEEEEEEChhHccCcCCcCCCccCCCCeEEEEEEEEEeecCC
Confidence 37899999999999999999999854 57899999999999999987543
No 206
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=98.69 E-value=3.4e-07 Score=73.13 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=75.7
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHH
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKL 313 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~ 313 (414)
...++.++|.+++..++|.+|+..+.+++..+|.++.+++.+|.++..+|++++|+..|+++++++|++ ..+...+..+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~~~~ 89 (131)
T 2vyi_A 11 EAERLKTEGNEQMKVENFEAAVHFYGKAIELNPANAVYFCNRAAAYSKLGNYAGAVQDCERAICIDPAY-SKAYGRMGLA 89 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHccCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHhhchHHHHHHHHHHHhcCccC-HHHHHHHHHH
Confidence 356889999999999999999999999999999999999999999999999999999999999999998 5677677666
Q ss_pred HHHHH
Q 015006 314 KKQRQ 318 (414)
Q Consensus 314 ~~~~~ 318 (414)
.....
T Consensus 90 ~~~~~ 94 (131)
T 2vyi_A 90 LSSLN 94 (131)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 55444
No 207
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.68 E-value=2.3e-07 Score=76.34 Aligned_cols=97 Identities=12% Similarity=0.115 Sum_probs=81.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAH---VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALS 311 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~---~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~ 311 (414)
...+.++|.+++..++|.+|+..+.++++++|++ ..+++++|.++..+|++++|+..|+++++++|++ ..+...+.
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~~a 106 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKDGGD-VKALYRRS 106 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSCC-HHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCccC-HHHHHHHH
Confidence 6688999999999999999999999999999998 9999999999999999999999999999999998 66777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhcc
Q 015006 312 KLKKQRQEVESKARKQFKGLFD 333 (414)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~ 333 (414)
.+........+ ....+.+.+.
T Consensus 107 ~~~~~~~~~~~-A~~~~~~al~ 127 (148)
T 2dba_A 107 QALEKLGRLDQ-AVLDLQRCVS 127 (148)
T ss_dssp HHHHHHTCHHH-HHHHHHHHHH
T ss_pred HHHHHcCCHHH-HHHHHHHHHH
Confidence 77655543333 2344444443
No 208
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.68 E-value=1.8e-07 Score=96.45 Aligned_cols=116 Identities=17% Similarity=0.081 Sum_probs=101.0
Q ss_pred HHHHHhhhcccccccc----------HHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcC--CHHH
Q 015006 186 AEKIRVTGNRLFKEGK----------FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG--ECRK 253 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~----------y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~--~~~~ 253 (414)
...+..+|..+.+.++ |.+|+..|.+++. ..|.+ ..++++++.++.+++ +|++
T Consensus 63 ~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~----~~pK~-----------y~aW~hR~w~l~~l~~~~~~~ 127 (567)
T 1dce_A 63 ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLR----VNPKS-----------YGTWHHRCWLLSRLPEPNWAR 127 (567)
T ss_dssp HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHTCSSCCHHH
T ss_pred HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHcccccHHH
Confidence 3445666666666666 9999999999999 78887 789999999999999 7799
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 254 SIEACNKVLDANPAHVKGLYRRGMAYMALG-EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 254 A~~~~~~al~~dp~~~ka~~r~g~a~~~l~-~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
|+..|+++|++||.|..||+.|+.++..++ .+++|++++.++++++|.| ..+...+..+...+
T Consensus 128 el~~~~k~l~~d~~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~n-~saW~~r~~ll~~l 191 (567)
T 1dce_A 128 ELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSN-YSSWHYRSCLLPQL 191 (567)
T ss_dssp HHHHHHHHHHHCTTCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCCC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCCC-ccHHHHHHHHHHhh
Confidence 999999999999999999999999999999 9999999999999999998 56766666665443
No 209
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.68 E-value=1.7e-07 Score=87.73 Aligned_cols=82 Identities=15% Similarity=0.136 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
...+.++|.++++.|+|.+|+..+.+++.++|.++.+++++|.++..+|++++|+.+|++|++++|++ ..+...+..+.
T Consensus 4 a~~~~~~g~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~lg~~~ 82 (281)
T 2c2l_A 4 AQELKEQGNRLFVGRKYPEAAACYGRAITRNPLVAVYYTNRALCYLKMQQPEQALADCRRALELDGQS-VKAHFFLGQCQ 82 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999998 56666666655
Q ss_pred HHH
Q 015006 315 KQR 317 (414)
Q Consensus 315 ~~~ 317 (414)
..+
T Consensus 83 ~~~ 85 (281)
T 2c2l_A 83 LEM 85 (281)
T ss_dssp HHT
T ss_pred HHc
Confidence 443
No 210
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=98.67 E-value=1.4e-08 Score=84.29 Aligned_cols=43 Identities=21% Similarity=0.180 Sum_probs=39.5
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCC-CCCCCCCeeeEEEEeeE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLM-PVVEGCEEVHFEVELVH 44 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~-~~ip~~~~l~~~vel~~ 44 (414)
||.+|++||++.|.|||++|||..+. +.||||++|+|+|+|++
T Consensus 89 aL~gmk~Ge~~~v~ip~~~aYG~~~~~~~Ipp~~~l~f~VeL~~ 132 (133)
T 2y78_A 89 GVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLD 132 (133)
T ss_dssp HSTTCBTTCEEEEEECGGGTTTTTCBTTTBCTTCCEEEEEEEEE
T ss_pred HHcCCCCCCEEEEEECcHHhCCCCCCCCCCCCCCeEEEEEEEEE
Confidence 68999999999999999999998554 66999999999999986
No 211
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.67 E-value=1.4e-07 Score=89.14 Aligned_cols=87 Identities=11% Similarity=0.025 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH-HHHHHHHHHH
Q 015006 202 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK-GLYRRGMAYM 280 (414)
Q Consensus 202 y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~k-a~~r~g~a~~ 280 (414)
+.+|+..|.+|+.. +.|.+ ..++.++|.++.++|++++|+..++++|+++|.++. +|+.+|.++.
T Consensus 80 ~~~A~~~~~rAl~~---~~p~~-----------~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~ 145 (308)
T 2ond_A 80 SDEAANIYERAIST---LLKKN-----------MLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFAR 145 (308)
T ss_dssp HHHHHHHHHHHHTT---TTTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSSSSCTHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH---hCccc-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHhccccCccHHHHHHHHHHH
Confidence 49999999999983 25555 557888888888888888888888888888888776 8888888888
Q ss_pred HcCCHHHHHHHHHHHHhhCCCC
Q 015006 281 ALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 281 ~l~~~~eA~~~~~~al~l~P~n 302 (414)
.+|++++|+..|++|++++|.+
T Consensus 146 ~~~~~~~A~~~~~~a~~~~p~~ 167 (308)
T 2ond_A 146 RAEGIKSGRMIFKKAREDARTR 167 (308)
T ss_dssp HHHCHHHHHHHHHHHHTSTTCC
T ss_pred HhcCHHHHHHHHHHHHhcCCCC
Confidence 8888888888888888887765
No 212
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.67 E-value=1.4e-07 Score=89.05 Aligned_cols=111 Identities=11% Similarity=0.031 Sum_probs=77.0
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhH-HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNL-LHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~-~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
.+...|..+.+.|++.+|...|.+++. +.|.+ .. ++.+++.++.++|++++|+..+.+|++.+|
T Consensus 101 ~~~~~~~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p 165 (308)
T 2ond_A 101 LYFAYADYEESRMKYEKVHSIYNRLLA----IEDID-----------PTLVYIQYMKFARRAEGIKSGRMIFKKAREDAR 165 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT----SSSSC-----------THHHHHHHHHHHHHHHCHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHh----ccccC-----------ccHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCC
Confidence 455666677778899999999999998 56655 22 677777777777777777777777777777
Q ss_pred CcHHHHHHHHHHHHH-cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMA-LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~-l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
.+..++...+..... +|++++|+..|++|++++|++ ..+...+..+.
T Consensus 166 ~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~p~~-~~~~~~~~~~~ 213 (308)
T 2ond_A 166 TRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDI-PEYVLAYIDYL 213 (308)
T ss_dssp CCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHTTC-HHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc-HHHHHHHHHHH
Confidence 776666654444332 577777777777777777776 44554444443
No 213
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=98.66 E-value=1.4e-08 Score=83.96 Aligned_cols=44 Identities=34% Similarity=0.393 Sum_probs=39.9
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC-CCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL-MPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~-~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++
T Consensus 86 aL~gm~~Ge~~~v~ip~~~aYG~~~~~~~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 86 GVATMTLGEKALFTIPYQLAYGERGYPPVIPPKATLVFEVELLAV 130 (130)
T ss_dssp HHHHSCTTEEEEEEECTTTSTTTTCCSTTSCSSCCEEEEEEEEEC
T ss_pred HHhCCCCCCEEEEEECcHHHCCCCCCCCCcCCCCeEEEEEEEEEC
Confidence 6889999999999999999999854 5679999999999999863
No 214
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=98.66 E-value=1.5e-08 Score=88.55 Aligned_cols=47 Identities=21% Similarity=0.333 Sum_probs=42.7
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC---CCCCCCCCeeeEEEEeeEEEee
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL---MPVVEGCEEVHFEVELVHLIQV 48 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~---~~~ip~~~~l~~~vel~~~~~~ 48 (414)
||.+|++||++.|.|||++|||..+ ++.||||++|+|+|+|+++...
T Consensus 112 aL~gMk~Ge~~~v~iPp~~aYG~~g~~~~~~Ip~~s~l~F~VeL~~v~~~ 161 (180)
T 2f4e_A 112 GVASMKSGERALVHVGWELAYGKEGNFSFPNVPPMADLLYEVEVIGFDET 161 (180)
T ss_dssp HHTTCCBTCEEEEEECGGGTTTTTCBSSSSCBCTTCCEEEEEEEEEESCB
T ss_pred HHhCCCCCCEEEEEECchHhCCcCCcccCCCcCCCCeEEEEEEEEEEecC
Confidence 6899999999999999999999865 4789999999999999998653
No 215
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.66 E-value=3.6e-07 Score=84.14 Aligned_cols=62 Identities=15% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Q 015006 236 LLHLNVAACLLK----LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 236 ~~~~N~a~~~~k----l~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~l~ 299 (414)
.+++++|.+|.. .+++.+|+..+.++++.+ ++.+++++|.++.. .+++++|+..|++|++++
T Consensus 75 ~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~ 144 (273)
T 1ouv_A 75 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 144 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCCCcccCHHHHHHHHHHHHHcC--CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC
Confidence 355555555555 555555555555555542 45555555555555 555555555555555554
No 216
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.65 E-value=4.5e-07 Score=71.50 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=70.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDAN-------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDAT 307 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d-------p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~ 307 (414)
..-++.+|..+++.++|..|+..+..|+... +..+..++.+|.++.++|+++.|+..+++|++++|++ ..+.
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~P~~-~~~~ 83 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELDPEH-QRAN 83 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCC-HHHH
Confidence 4567889999999999999999999999863 3568899999999999999999999999999999998 5666
Q ss_pred HHHHHHHHHH
Q 015006 308 AALSKLKKQR 317 (414)
Q Consensus 308 ~~l~~~~~~~ 317 (414)
.++..++..+
T Consensus 84 ~n~~~~~~~~ 93 (104)
T 2v5f_A 84 GNLKYFEYIM 93 (104)
T ss_dssp HHHHHHHHHH
T ss_pred hhHHHHHHHH
Confidence 6666555433
No 217
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=98.64 E-value=5e-07 Score=71.46 Aligned_cols=83 Identities=22% Similarity=0.381 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
..++.++|.++...++|++|+..+.+++..+|.++.+++.+|.++...|++++|+..|+++++++|.+ ..+...+..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~-~~~~~~la~~~ 87 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELDPNN-AEAWYNLGNAY 87 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCcCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCcc-HHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999987 56666666665
Q ss_pred HHHH
Q 015006 315 KQRQ 318 (414)
Q Consensus 315 ~~~~ 318 (414)
....
T Consensus 88 ~~~~ 91 (125)
T 1na0_A 88 YKQG 91 (125)
T ss_dssp HHTT
T ss_pred HHhc
Confidence 4433
No 218
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=98.64 E-value=3.5e-07 Score=80.21 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=81.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcH----------------HHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHV----------------KGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~----------------ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
...+.++|.++++.++|.+|+..+.+++.+.|.++ .+++++|.++..+|+|++|+..|++++++
T Consensus 38 ~~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~ 117 (198)
T 2fbn_A 38 AFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKI 117 (198)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 56788999999999999999999999999999887 89999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015006 299 DKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDK 334 (414)
Q Consensus 299 ~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (414)
+|++ ..+...+..+...+.+..+ ....+.+.+..
T Consensus 118 ~p~~-~~~~~~lg~~~~~~~~~~~-A~~~~~~al~~ 151 (198)
T 2fbn_A 118 DKNN-VKALYKLGVANMYFGFLEE-AKENLYKAASL 151 (198)
T ss_dssp STTC-HHHHHHHHHHHHHHTCHHH-HHHHHHHHHHH
T ss_pred Cccc-HHHHHHHHHHHHHcccHHH-HHHHHHHHHHH
Confidence 9998 6677777777655544333 23344444443
No 219
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.63 E-value=6.2e-07 Score=69.36 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=63.1
Q ss_pred hHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 235 NLLHLNVAACLLKLGE---CRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~---~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
..++..+|.+++..++ ..+|...+.+||.+||+++.|++-+|.+++..|+|++|+..|+++++.+|.+
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~p~~ 76 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDSNDPN 76 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Confidence 5678889999986666 7999999999999999999999999999999999999999999999999983
No 220
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=98.60 E-value=1.2e-07 Score=91.51 Aligned_cols=108 Identities=19% Similarity=0.178 Sum_probs=92.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++........ ......++.++|.++..+|++++|+..+.+++.+
T Consensus 186 ~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~---------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 256 (406)
T 3sf4_A 186 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGD---------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 256 (406)
T ss_dssp HHHHHHHHHHHHHHHTBHHHHHHHHHHHHHHHHHTTC---------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcCC---------cHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 3556788899999999999999999999996543211 1233568999999999999999999999999998
Q ss_pred CCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 265 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 265 dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.+.. +.+++.+|.++..+|++++|+..|++++++.+.
T Consensus 257 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 299 (406)
T 3sf4_A 257 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 299 (406)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhCcCchHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh
Confidence 7765 889999999999999999999999999998543
No 221
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=98.59 E-value=1.6e-07 Score=91.71 Aligned_cols=91 Identities=11% Similarity=0.063 Sum_probs=83.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+.+.|..+++.|+|.+|+..|++||. +.|.+ ..+++++|.||..+++|++|+.++.+|++++
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~ 337 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALE----IDPSN-----------TKALYRRAQGWQGLKEYDQALADLKKAQEIA 337 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT----TCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHH----hCchh-----------HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 55677899999999999999999999999 67766 6799999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRD 291 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~ 291 (414)
|++..++..++.++..++++++|...
T Consensus 338 P~~~~~~~~l~~~~~~~~~~~~a~k~ 363 (370)
T 1ihg_A 338 PEDKAIQAELLKVKQKIKAQKDKEKA 363 (370)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888654
No 222
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=98.57 E-value=4.3e-07 Score=93.65 Aligned_cols=123 Identities=13% Similarity=0.086 Sum_probs=99.2
Q ss_pred cccccH-HHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhC
Q 015006 197 FKEGKF-ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGE----------CRKSIEACNKVLDAN 265 (414)
Q Consensus 197 fk~g~y-~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~----------~~~A~~~~~~al~~d 265 (414)
.+.|.| ++|+..|.++|. .+|.+ ..++++++.++.++++ +++++..++++|+.+
T Consensus 39 ~~~~~~~eeal~~~~~~l~----~nP~~-----------~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~ 103 (567)
T 1dce_A 39 RQAGELDESVLELTSQILG----ANPDF-----------ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVN 103 (567)
T ss_dssp HHTTCCSHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHcCCCCHHHHHHHHHHHH----HCchh-----------HHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhC
Confidence 344544 578999999999 78887 7899999999999998 999999999999999
Q ss_pred CCcHHHHHHHHHHHHHcC--CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 015006 266 PAHVKGLYRRGMAYMALG--EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKK 335 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~--~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (414)
|++..||+.|+-++..++ ++++|++.+.++++++|.| ..+......+...+....+.+-..+.++....
T Consensus 104 pK~y~aW~hR~w~l~~l~~~~~~~el~~~~k~l~~d~~N-~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~ 174 (567)
T 1dce_A 104 PKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN-FHCWDYRRFVAAQAAVAPAEELAFTDSLITRN 174 (567)
T ss_dssp TTCHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTT
T ss_pred CCCHHHHHHHHHHHHHcccccHHHHHHHHHHHHhhcccc-ccHHHHHHHHHHHcCCChHHHHHHHHHHHHHC
Confidence 999999999999999999 7799999999999999998 56777666665554312223333444444433
No 223
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.57 E-value=3.1e-07 Score=85.79 Aligned_cols=108 Identities=13% Similarity=0.020 Sum_probs=81.2
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN-- 265 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d-- 265 (414)
.....|..+++.++|.+|+..|+.++.. + ++ .+...+++++|.++..+|++.+|+..+.+++...
T Consensus 137 ~~~~~a~l~~~~~r~~dA~~~l~~a~~~-----~-d~-------~~~~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~ 203 (282)
T 4f3v_A 137 VAWMKAVVYGAAERWTDVIDQVKSAGKW-----P-DK-------FLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAG 203 (282)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTTGGGC-----S-CH-------HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHhhcc-----C-Cc-------ccHHHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCC
Confidence 4456677788888888888888766551 1 10 0123578889999999999999999999988544
Q ss_pred CC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 015006 266 PA-HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAAL 310 (414)
Q Consensus 266 p~-~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l 310 (414)
|. .+.+++++|.|+..+|+.++|+..|++++..+|+ ..+...|
T Consensus 204 P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~~P~--~~~~~aL 247 (282)
T 4f3v_A 204 EACARAIAWYLAMARRSQGNESAAVALLEWLQTTHPE--PKVAAAL 247 (282)
T ss_dssp TTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCC--HHHHHHH
T ss_pred ccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCCc--HHHHHHH
Confidence 55 6778999999999999999999999999999987 3444333
No 224
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=98.56 E-value=2.4e-08 Score=82.47 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=39.2
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCC------CCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLM------PVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~------~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||++|||..+. +.||||++|+|+|+|+++
T Consensus 79 ~~~~m~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 79 GIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp TBCCCBTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred cccccCCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 46779999999999999999998543 589999999999999885
No 225
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=98.56 E-value=1.9e-07 Score=79.31 Aligned_cols=91 Identities=19% Similarity=0.253 Sum_probs=75.1
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCH----------HHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 246 LKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEF----------EEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 246 ~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~----------~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
-+++.|++|+..+.++++++|+++.+|+++|.++..++++ ++|+..|++||+++|++ .++...+..+..
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~~-~~A~~~LG~ay~ 91 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNPLDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPKK-DEAVWCIGNAYT 91 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcCc-HHHHHHHHHHHH
Confidence 3567899999999999999999999999999999999876 59999999999999998 678888888876
Q ss_pred HHH----------HHHHHHHHHHHhhccCCCC
Q 015006 316 QRQ----------EVESKARKQFKGLFDKKPG 337 (414)
Q Consensus 316 ~~~----------~~~~~~~~~~~~~~~~~~~ 337 (414)
.+. ..-++....|++.+...+.
T Consensus 92 ~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~ 123 (158)
T 1zu2_A 92 SFAFLTPDETEAKHNFDLATQFFQQAVDEQPD 123 (158)
T ss_dssp HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HhcccCcchhhhhccHHHHHHHHHHHHHhCCC
Confidence 553 2444555667766665543
No 226
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=98.54 E-value=1.9e-07 Score=74.72 Aligned_cols=74 Identities=19% Similarity=0.182 Sum_probs=67.2
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++. ..|.+ ..+++++|.|+.++|++++|+..+.+++..
T Consensus 26 ~~~~~~~lg~~~~~~~~~~~A~~~~~~al~----~~p~~-----------~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 90 (117)
T 3k9i_A 26 LAECYLGLGSTFRTLGEYRKAEAVLANGVK----QFPNH-----------QALRVFYAMVLYNLGRYEQGVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 467788999999999999999999999999 67776 678999999999999999999999999999
Q ss_pred CCCcHHHHH
Q 015006 265 NPAHVKGLY 273 (414)
Q Consensus 265 dp~~~ka~~ 273 (414)
.|+++....
T Consensus 91 ~p~~~~~~~ 99 (117)
T 3k9i_A 91 TSDDETIQS 99 (117)
T ss_dssp HCCCHHHHH
T ss_pred CCCcHHHHH
Confidence 999987653
No 227
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=98.53 E-value=5.9e-07 Score=71.79 Aligned_cols=98 Identities=11% Similarity=0.214 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH------HHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE------PDATA 308 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~------~~~~~ 308 (414)
...+.++|.+++..++|.+|+..+.+++..+|.++.+++.+|.++..+|++++|+..|++++.+.|.+. ..+..
T Consensus 4 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (131)
T 1elr_A 4 ALKEKELGNDAYKKKDFDTALKHYDKAKELDPTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAYA 83 (131)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHHH
Confidence 467899999999999999999999999999999999999999999999999999999999999987541 23444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcc
Q 015006 309 ALSKLKKQRQEVESKARKQFKGLFD 333 (414)
Q Consensus 309 ~l~~~~~~~~~~~~~~~~~~~~~~~ 333 (414)
.+..+........ .....+...+.
T Consensus 84 ~la~~~~~~~~~~-~A~~~~~~~~~ 107 (131)
T 1elr_A 84 RIGNSYFKEEKYK-DAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHTTCHH-HHHHHHHHHHH
T ss_pred HHHHHHHHhccHH-HHHHHHHHHHH
Confidence 5555544333222 22334444443
No 228
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.53 E-value=8.8e-07 Score=84.03 Aligned_cols=113 Identities=9% Similarity=-0.092 Sum_probs=91.8
Q ss_pred HHHHHhhhccccccc--cHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHH----HHc---CCHHHHHH
Q 015006 186 AEKIRVTGNRLFKEG--KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACL----LKL---GECRKSIE 256 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g--~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~----~kl---~~~~~A~~ 256 (414)
...+..+|..+...+ .+.+|+..+.++|. .+|.+ ..++++|+.+. .++ +++.+++.
T Consensus 67 ~taWn~R~~~L~~l~~~~~~eeL~~~~~~L~----~nPk~-----------y~aW~~R~~iL~~~~~~l~~~~~~~~EL~ 131 (306)
T 3dra_A 67 YTIWIYRFNILKNLPNRNLYDELDWCEEIAL----DNEKN-----------YQIWNYRQLIIGQIMELNNNDFDPYREFD 131 (306)
T ss_dssp HHHHHHHHHHHHTCTTSCHHHHHHHHHHHHH----HCTTC-----------CHHHHHHHHHHHHHHHHTTTCCCTHHHHH
T ss_pred HHHHHHHHHHHHHcccccHHHHHHHHHHHHH----HCccc-----------HHHHHHHHHHHHHHHHhccccCCHHHHHH
Confidence 445667777777777 99999999999998 67777 67888888888 667 78889999
Q ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHcCCHH--HHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 257 ACNKVLDANPAHVKGLYRRGMAYMALGEFE--EAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 257 ~~~~al~~dp~~~ka~~r~g~a~~~l~~~~--eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
.|.++|+.+|.|..|++.|+.++..++.++ ++++.+.++++++|.| -.+......+.
T Consensus 132 ~~~~~l~~~pkny~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N-~sAW~~R~~ll 190 (306)
T 3dra_A 132 ILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKN-NSAWSHRFFLL 190 (306)
T ss_dssp HHHHHHHHCTTCHHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred HHHHHHHhCCCCHHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 999999999999999999999999999888 8999999999999988 44555444443
No 229
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.53 E-value=7.9e-07 Score=79.30 Aligned_cols=78 Identities=13% Similarity=0.062 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHH
Q 015006 235 NLLHLNVAACLLK----LGECRKSIEACNKVLDANP--AHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKSSEP 304 (414)
Q Consensus 235 ~~~~~N~a~~~~k----l~~~~~A~~~~~~al~~dp--~~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~l~P~n~~ 304 (414)
..+++|+|.+|.. .+++.+|+..+.++++..| .++.|++++|.+|.. .+++++|+..|++|+++ |.+ .
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~-~~~-~ 162 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL-SRT-G 162 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT-SCT-T
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc-CCC-H
Confidence 4577788888877 7788888888888888776 357888888888888 77888888888888887 333 3
Q ss_pred HHHHHHHHHH
Q 015006 305 DATAALSKLK 314 (414)
Q Consensus 305 ~~~~~l~~~~ 314 (414)
.+...|..+.
T Consensus 163 ~a~~~Lg~~y 172 (212)
T 3rjv_A 163 YAEYWAGMMF 172 (212)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4555555554
No 230
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=98.53 E-value=4.5e-07 Score=78.89 Aligned_cols=107 Identities=15% Similarity=0.095 Sum_probs=89.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++..+... +.+ ......+++|+|.++..+|++++|+..+.+++.+
T Consensus 65 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~-~~~-------~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 136 (203)
T 3gw4_A 65 EHRALHQVGMVERMAGNWDAARRCFLEERELLASL-PED-------PLAASANAYEVATVALHFGDLAGARQEYEKSLVY 136 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHS-CCC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHc-Ccc-------HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 56778889999999999999999999999976532 212 1123678999999999999999999999999976
Q ss_pred CC--C----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 265 NP--A----HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 265 dp--~----~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
.+ . ...++..+|.++..+|++++|+..|++|+++.
T Consensus 137 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 177 (203)
T 3gw4_A 137 AQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRARDIF 177 (203)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 42 1 24567999999999999999999999999884
No 231
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=98.50 E-value=4.1e-07 Score=78.38 Aligned_cols=107 Identities=15% Similarity=0.080 Sum_probs=80.4
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH------------------H------HHhhhhhHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG------------------K------VFVGKRNLLHLNV 241 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~------------------~------~~~~~~~~~~~N~ 241 (414)
+..+...|..++..|++.+|+..|.+++. ..| +..-. . ...+....+++++
T Consensus 40 ~~a~~~la~~~~~~g~~~~A~~~~~~a~~----~~p-~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~P~~~~~~~~l 114 (176)
T 2r5s_A 40 GDVKLAKADCLLETKQFELAQELLATIPL----EYQ-DNSYKSLIAKLELHQQAAESPELKRLEQELAANPDNFELACEL 114 (176)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTCCG----GGC-CHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHSTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHhhh----ccC-ChHHHHHHHHHHHHhhcccchHHHHHHHHHHhCCCCHHHHHHH
Confidence 34455666666667777777777766655 222 21100 0 0011225689999
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 015006 242 AACLLKLGECRKSIEACNKVLDANPAH--VKGLYRRGMAYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 242 a~~~~kl~~~~~A~~~~~~al~~dp~~--~ka~~r~g~a~~~l~~~~eA~~~~~~al~ 297 (414)
|.++..+|++++|+..+.++++++|++ ..+++.+|.++..+|++++|+..|+++|.
T Consensus 115 a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 115 AVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMDILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHHH
Confidence 999999999999999999999999976 66999999999999999999999999885
No 232
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.50 E-value=1.9e-06 Score=79.17 Aligned_cols=77 Identities=13% Similarity=0.135 Sum_probs=52.3
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHHH
Q 015006 235 NLLHLNVAACLLK----LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKSSEPDA 306 (414)
Q Consensus 235 ~~~~~N~a~~~~k----l~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~l~P~n~~~~ 306 (414)
..+++|+|.+|.. .+++++|+..+.++++.+ ++.+++++|.++.. .+++++|+..|++++++.+ ..+
T Consensus 110 ~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~--~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~~---~~a 184 (273)
T 1ouv_A 110 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN--DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD---SPG 184 (273)
T ss_dssp HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT--CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC---HHH
T ss_pred ccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC--cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCC---HHH
Confidence 4567777777777 777777777777777764 56777777777777 7777777777777777642 345
Q ss_pred HHHHHHHHHH
Q 015006 307 TAALSKLKKQ 316 (414)
Q Consensus 307 ~~~l~~~~~~ 316 (414)
...+..+...
T Consensus 185 ~~~lg~~~~~ 194 (273)
T 1ouv_A 185 CFNAGNMYHH 194 (273)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 5555555443
No 233
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=98.49 E-value=3.4e-07 Score=85.39 Aligned_cols=108 Identities=19% Similarity=0.195 Sum_probs=91.7
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|.+|+..|.+++....... + ......++.++|.++..+|++++|+..+.+++.+
T Consensus 182 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~--~-------~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 252 (338)
T 3ro2_A 182 QGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFG--D-------KAAERRAYSNLGNAYIFLGEFETASEYYKKTLLL 252 (338)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT--C-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcC--C-------hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 355677889999999999999999999998654321 1 1233568999999999999999999999999988
Q ss_pred CCCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 265 NPAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 265 dp~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.+.. ..+++.+|.++..+|++++|+..|++++.+.+.
T Consensus 253 ~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~~~ 295 (338)
T 3ro2_A 253 ARQLKDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQE 295 (338)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHhhcchhHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh
Confidence 7655 889999999999999999999999999998653
No 234
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=98.49 E-value=6.3e-07 Score=70.67 Aligned_cols=83 Identities=16% Similarity=0.185 Sum_probs=69.1
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+......|..+|+.++|..|+..|..|+.....-... ......++.++|.|++++|+++.|+..+.+++.++
T Consensus 5 a~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~--------~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l~ 76 (104)
T 2v5f_A 5 AEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEIS--------TIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (104)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCC--------SSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCC--------cccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhcC
Confidence 4556688999999999999999999999865321110 11235789999999999999999999999999999
Q ss_pred CCcHHHHHHHH
Q 015006 266 PAHVKGLYRRG 276 (414)
Q Consensus 266 p~~~ka~~r~g 276 (414)
|++..++.+++
T Consensus 77 P~~~~~~~n~~ 87 (104)
T 2v5f_A 77 PEHQRANGNLK 87 (104)
T ss_dssp TTCHHHHHHHH
T ss_pred CCCHHHHhhHH
Confidence 99999988876
No 235
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=98.48 E-value=1.9e-07 Score=90.87 Aligned_cols=106 Identities=19% Similarity=0.242 Sum_probs=90.0
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++....... + ......++.++|.+|+.+|++++|+..+.+++.+.
T Consensus 223 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 293 (411)
T 4a1s_A 223 GRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFG--D-------RAAERRANSNLGNSHIFLGQFEDAAEHYKRTLALA 293 (411)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--C-------HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcC--C-------cHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHH
Confidence 34667789999999999999999999999654311 1 12235689999999999999999999999999988
Q ss_pred CCc------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 015006 266 PAH------VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 300 (414)
Q Consensus 266 p~~------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P 300 (414)
+.. ..+++.+|.++..+|++++|+..|++++.+.+
T Consensus 294 ~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~ 334 (411)
T 4a1s_A 294 VELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLAIAQ 334 (411)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 744 78999999999999999999999999999854
No 236
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.47 E-value=3.6e-06 Score=80.48 Aligned_cols=100 Identities=18% Similarity=0.105 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcC--CHHHHHHHHHHHHHhCCCcHHHHHHHHHHH
Q 015006 202 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG--ECRKSIEACNKVLDANPAHVKGLYRRGMAY 279 (414)
Q Consensus 202 y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~--~~~~A~~~~~~al~~dp~~~ka~~r~g~a~ 279 (414)
+.+++..+..++. .+|.+ ..++++++.+..+++ .|.+++..|.++|+++|.|..||+.|+.++
T Consensus 90 l~~EL~~~~~~L~----~~PKn-----------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprNy~AW~~R~~vl 154 (331)
T 3dss_A 90 VKAELGFLESCLR----VNPKS-----------YGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVA 154 (331)
T ss_dssp HHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 7889999999998 67877 789999999999999 499999999999999999999999999999
Q ss_pred HHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 280 MALGE-FEEAQRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 280 ~~l~~-~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
..++. ++++++.+.++++.+|.| ..+...+..+-..+
T Consensus 155 ~~l~~~~~eel~~~~~~I~~~p~N-~SAW~~R~~ll~~l 192 (331)
T 3dss_A 155 AQAAVAPAEELAFTDSLITRNFSN-YSSWHYRSCLLPQL 192 (331)
T ss_dssp HHTTCCHHHHHHHHHHHHHHCSCC-HHHHHHHHHHHHHH
T ss_pred HHhCcCHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHh
Confidence 99999 699999999999999999 45666666554444
No 237
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.46 E-value=3.9e-07 Score=85.38 Aligned_cols=108 Identities=14% Similarity=0.032 Sum_probs=88.6
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChH-----------------HHH------HHhhhhhHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDE-----------------EGK------VFVGKRNLLHLNVA 242 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~-----------------e~~------~~~~~~~~~~~N~a 242 (414)
+..+...|..+...|++++|+..|.+++. ..|.... ... ...+....+++|+|
T Consensus 151 ~~a~~~la~~~~~~g~~~~A~~~l~~~~~----~~p~~~~~~~~~~~~l~~~~~~~~a~~~l~~al~~~P~~~~~~~~la 226 (287)
T 3qou_A 151 GEIGLLLAETLIALNRSEDAEAVLXTIPL----QDQDTRYQGLVAQIELLXQAADTPEIQQLQQQVAENPEDAALATQLA 226 (287)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHTTSCG----GGCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCCHHHHHHHHHhCch----hhcchHHHHHHHHHHHHhhcccCccHHHHHHHHhcCCccHHHHHHHH
Confidence 66778889999999999999999988766 3332110 000 11222356899999
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCc--HHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAH--VKGLYRRGMAYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~--~ka~~r~g~a~~~l~~~~eA~~~~~~al~ 297 (414)
.++..+|++++|+..+.++++.+|++ ..++.++|.++..+|+.++|+..|+++|.
T Consensus 227 ~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~~~g~~~~a~~~~r~al~ 283 (287)
T 3qou_A 227 LQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILAALGTGDALASXYRRQLY 283 (287)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHHHHCTTCHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 99999999999999999999999998 99999999999999999999999999885
No 238
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=98.43 E-value=2.1e-06 Score=81.48 Aligned_cols=103 Identities=11% Similarity=0.032 Sum_probs=93.3
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHH--HHHHHHHHHHHhCCCcHHHHHHHHH
Q 015006 200 GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECR--KSIEACNKVLDANPAHVKGLYRRGM 277 (414)
Q Consensus 200 g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~--~A~~~~~~al~~dp~~~ka~~r~g~ 277 (414)
+++.+++..+.+++. .+|.+ ..++++++.+..+++.|. +++..|+++|+.+|.|..|+..|+.
T Consensus 124 ~~~~~EL~~~~~~l~----~~pkn-----------y~aW~~R~~vl~~l~~~~~~~EL~~~~~~i~~d~~N~sAW~~R~~ 188 (306)
T 3dra_A 124 FDPYREFDILEAMLS----SDPKN-----------HHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWSHRFF 188 (306)
T ss_dssp CCTHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCTTCHHHHHHHHHHHHHCTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHhcccChHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 789999999999999 78887 779999999999999999 9999999999999999999999999
Q ss_pred HHHHcCC------HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 278 AYMALGE------FEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 278 a~~~l~~------~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
++..++. ++++++.+.+++.++|+| ..+...+..+-....
T Consensus 189 ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~n-~SaW~y~~~ll~~~~ 234 (306)
T 3dra_A 189 LLFSKKHLATDNTIDEELNYVKDKIVKCPQN-PSTWNYLLGIHERFD 234 (306)
T ss_dssp HHHSSGGGCCHHHHHHHHHHHHHHHHHCSSC-HHHHHHHHHHHHHTT
T ss_pred HHHhccccchhhhHHHHHHHHHHHHHhCCCC-ccHHHHHHHHHHhcC
Confidence 9999998 999999999999999999 567766666654433
No 239
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=98.43 E-value=4.8e-07 Score=70.49 Aligned_cols=80 Identities=13% Similarity=0.097 Sum_probs=65.5
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. +.|.+ ..+++++|.||.++|++++|+..+.+++++.
T Consensus 7 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~ 71 (100)
T 3ma5_A 7 PFTRYALAQEHLKHDNASRALALFEELVE----TDPDY-----------VGTYYHLGKLYERLDRTDDAIDTYAQGIEVA 71 (100)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HSTTC-----------THHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhh
Confidence 45677889999999999999999999999 67776 6699999999999999999999999999987
Q ss_pred CCc--HHHHHHHHHHHH
Q 015006 266 PAH--VKGLYRRGMAYM 280 (414)
Q Consensus 266 p~~--~ka~~r~g~a~~ 280 (414)
|.+ ..+...+..++.
T Consensus 72 ~~~~~~~~~~~l~~~l~ 88 (100)
T 3ma5_A 72 REEGTQKDLSELQDAKL 88 (100)
T ss_dssp HHHSCHHHHHHHHHHHH
T ss_pred hcCCchhHHHHHHHHHH
Confidence 643 333333343333
No 240
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=98.43 E-value=2.8e-06 Score=68.92 Aligned_cols=101 Identities=12% Similarity=0.153 Sum_probs=81.3
Q ss_pred HHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHH---HHHHHHHHHHhC-C-CcHHHHHHHH
Q 015006 202 FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRK---SIEACNKVLDAN-P-AHVKGLYRRG 276 (414)
Q Consensus 202 y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~---A~~~~~~al~~d-p-~~~ka~~r~g 276 (414)
...+...|.+++. ..+.+ ..+.+|+|.|+.+..+... ++..+...+..+ | ..-.++|.+|
T Consensus 17 l~~~~~~y~~e~~----~~~~s-----------~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~LA 81 (126)
T 1nzn_A 17 LLKFEKKFQSEKA----AGSVS-----------KSTQFEYAWCLVRTRYNDDIRKGIVLLEELLPKGSKEEQRDYVFYLA 81 (126)
T ss_dssp HHHHHHHHHHHHH----HSCCC-----------HHHHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----cCCCc-----------HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 4455666777665 22222 5688999999999988776 999999988877 5 5788999999
Q ss_pred HHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 277 MAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 277 ~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
.+++++|+|+.|+..++.+|+++|+| ..+......++.++.
T Consensus 82 vg~yklg~Y~~A~~~~~~lL~~eP~n-~QA~~Lk~~i~~~i~ 122 (126)
T 1nzn_A 82 VGNYRLKEYEKALKYVRGLLQTEPQN-NQAKELERLIDKAMK 122 (126)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 667777766665543
No 241
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=98.42 E-value=2.3e-06 Score=76.22 Aligned_cols=112 Identities=10% Similarity=-0.015 Sum_probs=89.2
Q ss_pred HHHHHhhhccccc----cccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH----cCCHHHHHHH
Q 015006 186 AEKIRVTGNRLFK----EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK----LGECRKSIEA 257 (414)
Q Consensus 186 a~~~k~~Gn~~fk----~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k----l~~~~~A~~~ 257 (414)
+..+...|..++. .+++.+|+..|.+|+. ..+.+ ....+++|+|.+|.. .+++.+|+.+
T Consensus 85 ~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~----~~~~~---------~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~ 151 (212)
T 3rjv_A 85 KSGEIVLARVLVNRQAGATDVAHAITLLQDAAR----DSESD---------AAVDAQMLLGLIYASGVHGPEDDVKASEY 151 (212)
T ss_dssp HHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTS----STTSH---------HHHHHHHHHHHHHHHTSSSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHH----cCCCc---------chHHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 3445566777776 7888899999988887 33310 115689999999999 8999999999
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHHc-C-----CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 258 CNKVLDANPAHVKGLYRRGMAYMAL-G-----EFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 258 ~~~al~~dp~~~ka~~r~g~a~~~l-~-----~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
+.+++++ |.++.+++++|.+|... | ++++|+.+|++|++... ..+...|..+.
T Consensus 152 ~~~A~~~-~~~~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~---~~A~~~l~~l~ 210 (212)
T 3rjv_A 152 FKGSSSL-SRTGYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGF---DTGCEEFDRIS 210 (212)
T ss_dssp HHHHHHT-SCTTHHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTC---HHHHHHHHHHH
T ss_pred HHHHHHc-CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCC---HHHHHHHHHhh
Confidence 9999999 77888999999999875 3 89999999999999864 34666666553
No 242
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.39 E-value=4.6e-06 Score=80.23 Aligned_cols=103 Identities=16% Similarity=0.018 Sum_probs=90.4
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 015006 200 GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLG-ECRKSIEACNKVLDANPAHVKGLYRRGMA 278 (414)
Q Consensus 200 g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~-~~~~A~~~~~~al~~dp~~~ka~~r~g~a 278 (414)
+..++|+..+.++|. ++|.+ .+++++++.+...++ .+++++..+..+|..+|.+..+++.|+.+
T Consensus 68 e~se~AL~lt~~~L~----~nP~~-----------ytaWn~R~~iL~~l~~~l~eEL~~~~~~L~~nPKny~aW~hR~wl 132 (349)
T 3q7a_A 68 EKSERALELTEIIVR----MNPAH-----------YTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLL 132 (349)
T ss_dssp CCSHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH----hCchh-----------HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Confidence 455789999999999 78888 789999999999999 59999999999999999999999999999
Q ss_pred HHHc-C-CHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 279 YMAL-G-EFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 279 ~~~l-~-~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
+..+ + +++++++.+.++|+++|.| -.+.....-+-..+.
T Consensus 133 L~~l~~~~~~~EL~~~~k~L~~dpkN-y~AW~~R~wvl~~l~ 173 (349)
T 3q7a_A 133 LDRISPQDPVSEIEYIHGSLLPDPKN-YHTWAYLHWLYSHFS 173 (349)
T ss_dssp HHHHCCSCCHHHHHHHHHHTSSCTTC-HHHHHHHHHHHHHHH
T ss_pred HHHhcCCChHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHHhc
Confidence 9998 8 9999999999999999998 556655555544443
No 243
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=98.37 E-value=3e-06 Score=81.10 Aligned_cols=103 Identities=15% Similarity=0.115 Sum_probs=89.4
Q ss_pred ccccHH-HHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCC----------HHHHHHHHHHHHHhCC
Q 015006 198 KEGKFE-LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGE----------CRKSIEACNKVLDANP 266 (414)
Q Consensus 198 k~g~y~-~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~----------~~~A~~~~~~al~~dp 266 (414)
+.|.|. +|+..+.++|. ++|.+ .++++.++.+...++. +.+++..+..+|..+|
T Consensus 41 ~~~e~s~eaL~~t~~~L~----~nP~~-----------ytaWn~Rr~iL~~l~~~~~~~~~~~~l~~EL~~~~~~L~~~P 105 (331)
T 3dss_A 41 QAGELDESVLELTSQILG----ANPDF-----------ATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP 105 (331)
T ss_dssp HTTCCSHHHHHHHHHHHT----TCTTC-----------HHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred HcCCCCHHHHHHHHHHHH----HCchh-----------HHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHhCC
Confidence 566666 79999999999 88888 7888999999888776 7899999999999999
Q ss_pred CcHHHHHHHHHHHHHcCC--HHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMALGE--FEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~--~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
.|..+|+.|+.++..++. +++++..+.++++++|.| -.+......+-..
T Consensus 106 Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~l~~dprN-y~AW~~R~~vl~~ 156 (331)
T 3dss_A 106 KSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERN-FHCWDYRRFVAAQ 156 (331)
T ss_dssp TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhccCcccHHHHHHHHHHHHHhCCCC-HHHHHHHHHHHHH
Confidence 999999999999999994 999999999999999998 5566655555443
No 244
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=98.35 E-value=6.9e-07 Score=90.33 Aligned_cols=109 Identities=11% Similarity=0.071 Sum_probs=92.7
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
...+..+.+.|..+..+|+|++|+..|.++|.+....-+.+ +...+..++|+|.+|..+|+|++|+..+.+||
T Consensus 348 p~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al 420 (490)
T 3n71_A 348 LYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHN-------NAQLGMAVMRAGLTNWHAGHIEVGHGMICKAY 420 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTT-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCC-------CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34577888999999999999999999999999776555544 45568899999999999999999999999999
Q ss_pred HhC-----CCc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 263 DAN-----PAH---VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 263 ~~d-----p~~---~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
++- |++ .+.+-.+++++..++.|.+|...|.+|.+-
T Consensus 421 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 421 AILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 763 444 566778999999999999999999988653
No 245
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.33 E-value=8.8e-06 Score=67.40 Aligned_cols=89 Identities=11% Similarity=-0.031 Sum_probs=79.1
Q ss_pred hhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCC
Q 015006 192 TGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK----LGECRKSIEACNKVLDANPA 267 (414)
Q Consensus 192 ~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k----l~~~~~A~~~~~~al~~dp~ 267 (414)
.|..++..+.+..|+..|++|... .+ ..+++|+|.+|.. .+++.+|+.++.+|.+. .
T Consensus 31 lg~~y~~g~~~~~A~~~~~~Aa~~------g~-----------~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~--g 91 (138)
T 1klx_A 31 LSLVSNSQINKQKLFQYLSKACEL------NS-----------GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGL--N 91 (138)
T ss_dssp HHHHTCTTSCHHHHHHHHHHHHHT------TC-----------HHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHT--T
T ss_pred HHHHHHcCCCHHHHHHHHHHHHcC------CC-----------HHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHcC--C
Confidence 667777778888899999999982 22 5689999999999 89999999999999887 7
Q ss_pred cHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhC
Q 015006 268 HVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 268 ~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~l~ 299 (414)
++.|++++|.+|.. .+++++|+..|++|.++.
T Consensus 92 ~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g 127 (138)
T 1klx_A 92 DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLG 127 (138)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCC
Confidence 89999999999999 999999999999999985
No 246
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=98.28 E-value=3e-06 Score=81.58 Aligned_cols=112 Identities=13% Similarity=-0.012 Sum_probs=96.4
Q ss_pred HHHHhhhccccccc-cHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc-C-CHHHHHHHHHHHHH
Q 015006 187 EKIRVTGNRLFKEG-KFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-G-ECRKSIEACNKVLD 263 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g-~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl-~-~~~~A~~~~~~al~ 263 (414)
..+..+|..+...+ .+.+|+..+.++|. .+|.+ ..++++|+.+..++ + ++.+++..|.++|+
T Consensus 89 taWn~R~~iL~~l~~~l~eEL~~~~~~L~----~nPKn-----------y~aW~hR~wlL~~l~~~~~~~EL~~~~k~L~ 153 (349)
T 3q7a_A 89 TVWQYRFSLLTSLNKSLEDELRLMNEFAV----QNLKS-----------YQVWHHRLLLLDRISPQDPVSEIEYIHGSLL 153 (349)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHH----TTCCC-----------HHHHHHHHHHHHHHCCSCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHH----hCCCc-----------HHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Confidence 34566677777777 59999999999998 78888 78999999999998 7 89999999999999
Q ss_pred hCCCcHHHHHHHHHHHHHcCCHH--------HHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 264 ANPAHVKGLYRRGMAYMALGEFE--------EAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 264 ~dp~~~ka~~r~g~a~~~l~~~~--------eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
.+|.|..|++.|+-++..++.++ ++++.+.++++++|.| ..+......+.
T Consensus 154 ~dpkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~N-~SAW~~R~~lL 211 (349)
T 3q7a_A 154 PDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGRN-NSAWGWRWYLR 211 (349)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTTC-HHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCCC-HHHHHHHHHHH
Confidence 99999999999999999999888 9999999999999998 44555554443
No 247
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=98.26 E-value=2e-06 Score=68.22 Aligned_cols=81 Identities=12% Similarity=0.060 Sum_probs=65.9
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++. ..|.+ ..++.++|.|+..+|++++|+..+.+++.++
T Consensus 19 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~----~~p~~-----------~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 83 (115)
T 2kat_A 19 MLLRFTLGKTYAEHEQFDAALPHLRAALD----FDPTY-----------SVAWKWLGKTLQGQGDRAGARQAWESGLAAA 83 (115)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHH----HCCCc-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhc
Confidence 45677889999999999999999999999 56666 6689999999999999999999999999998
Q ss_pred CC--cHHHHHHHHHHHHH
Q 015006 266 PA--HVKGLYRRGMAYMA 281 (414)
Q Consensus 266 p~--~~ka~~r~g~a~~~ 281 (414)
|. +..++..+..++..
T Consensus 84 ~~~~~~~~~~~l~~~l~~ 101 (115)
T 2kat_A 84 QSRGDQQVVKELQVFLRR 101 (115)
T ss_dssp HHHTCHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHH
Confidence 74 33444444444333
No 248
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=98.25 E-value=1.7e-06 Score=80.65 Aligned_cols=130 Identities=14% Similarity=0.047 Sum_probs=96.7
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc--
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH-- 268 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~-- 268 (414)
..+..+...|+|.+|...|..++. ..|.+ . +++++|.++++.++|.+|+..+..++...+..
T Consensus 107 ayA~~L~~~g~y~eA~~~l~~~~~----~~p~~-----------~-~~~~~a~l~~~~~r~~dA~~~l~~a~~~~d~~~~ 170 (282)
T 4f3v_A 107 GFAACEAAQGNYADAMEALEAAPV----AGSEH-----------L-VAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLA 170 (282)
T ss_dssp HHHHHHHHHTCHHHHHHHHTSSCC----TTCHH-----------H-HHHHHHHHHHHTTCHHHHHHHHTTGGGCSCHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHh----cCCch-----------H-HHHHHHHHHHHcCCHHHHHHHHHHhhccCCcccH
Confidence 445566677899999999987765 34432 4 88999999999999999999999887753221
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKVD--KSSEPDATAALSKLKKQRQEVESKARKQFKGLFDKKPG 337 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~--P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 337 (414)
..++|.+|.++..+|++++|+..|++++... |....++...+..+...+.+ ..+....++++....+.
T Consensus 171 ~~a~~~LG~al~~LG~~~eAl~~l~~a~~g~~~P~~~~da~~~~glaL~~lGr-~deA~~~l~~a~a~~P~ 240 (282)
T 4f3v_A 171 GAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN-ESAAVALLEWLQTTHPE 240 (282)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSTTTTTTHHHHHHHHHHHHHHHTC-HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhcCCc
Confidence 4589999999999999999999999999654 55334566666666555443 33445667777766554
No 249
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.23 E-value=3.5e-06 Score=81.03 Aligned_cols=108 Identities=16% Similarity=0.075 Sum_probs=84.1
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|..++..|+|..|...|.+++....... + ......+++|+|.++..+|+|.+|+..+.+++.+
T Consensus 52 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~--~-------~~~~~~~~~~la~~~~~~G~~~~A~~~~~~al~~ 122 (373)
T 1hz4_A 52 RIVATSVLGEVLHCKGELTRSLALMQQTEQMARQHD--V-------WHYALWSLIQQSEILFAQGFLQTAWETQEKAFQL 122 (373)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--C-------HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhcC--c-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 455667788888889999999999999988543221 1 1122456788999999999999999999998876
Q ss_pred C--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 265 N--------PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 265 d--------p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
. |....++..+|.++..+|++++|...|++++.+.|.
T Consensus 123 ~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 123 INEQHLEQLPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHTTCTTSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT
T ss_pred HHHhccccCcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 4 345667888899999999999999999999988764
No 250
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=98.21 E-value=8.8e-06 Score=78.22 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=88.7
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+...|..++..|+|.+|+..|.+++.......... ......++.|+|.++..+|++++|+..+.+++.+.
T Consensus 93 ~~~~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~-------~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~ 165 (373)
T 1hz4_A 93 LWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQ-------LPMHEFLVRIRAQLLWAWARLDEAEASARSGIEVL 165 (373)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTT-------STHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhcccc-------CcHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh
Confidence 34466788999999999999999999998654322110 01235688999999999999999999999999987
Q ss_pred CC-----cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 266 PA-----HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 266 p~-----~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
+. ...+++.+|.++...|++++|+..+++++.+.
T Consensus 166 ~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~ 204 (373)
T 1hz4_A 166 SSYQPQQQLQCLAMLIQCSLARGDLDNARSQLNRLENLL 204 (373)
T ss_dssp TTSCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred hccCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 75 35689999999999999999999999999874
No 251
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.15 E-value=9.7e-06 Score=82.34 Aligned_cols=102 Identities=12% Similarity=0.039 Sum_probs=78.0
Q ss_pred HHHHhhhccccc-------cccHH-------HHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHH
Q 015006 187 EKIRVTGNRLFK-------EGKFE-------LAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECR 252 (414)
Q Consensus 187 ~~~k~~Gn~~fk-------~g~y~-------~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~ 252 (414)
..+...|..+.+ .|++. +|+..|.+|+.. +.|.+ ..+++++|..+.++|+++
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~---~~p~~-----------~~l~~~~~~~~~~~g~~~ 338 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST---LLKKN-----------MLLYFAYADYEESRMKYE 338 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTT---TCSSC-----------HHHHHHHHHHHHHTTCHH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHH---hCccc-----------HHHHHHHHHHHHhcCCHH
Confidence 345556666664 68877 899999999962 24555 567888888888888888
Q ss_pred HHHHHHHHHHHhCCCcH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 253 KSIEACNKVLDANPAHV-KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 253 ~A~~~~~~al~~dp~~~-ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+|+..+.++++++|.++ .+|...|.++..+|++++|+..|++|++..|.+
T Consensus 339 ~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~Al~~~~~~ 389 (530)
T 2ooe_A 339 KVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTR 389 (530)
T ss_dssp HHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HHHHHHHHHhCccccCchHHHHHHHHHHHHhcCHHHHHHHHHHHHhccCCc
Confidence 88888888888888774 688888888777777778887787777776654
No 252
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.10 E-value=4.3e-05 Score=77.53 Aligned_cols=116 Identities=10% Similarity=0.111 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH-------cCCHH-------HHHHHHHHHHH-hCCC
Q 015006 203 ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK-------LGECR-------KSIEACNKVLD-ANPA 267 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-------l~~~~-------~A~~~~~~al~-~dp~ 267 (414)
..|+..|.+|+. ..|.+ ..+++++|..+.+ +|+++ +|+..+.+|++ +.|+
T Consensus 255 ~~a~~~y~~al~----~~p~~-----------~~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~ 319 (530)
T 2ooe_A 255 KRVMFAYEQCLL----VLGHH-----------PDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKK 319 (530)
T ss_dssp HHHHHHHHHHHH----HHTTC-----------HHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSS
T ss_pred HHHHHHHHHHHH----hCCCC-----------HHHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcc
Confidence 477888999998 45555 6689999999886 79987 99999999997 8999
Q ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Q 015006 268 HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQEVESKARKQFKGLFDK 334 (414)
Q Consensus 268 ~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 334 (414)
++.+++.+|.++..+|++++|+..|++++++.|.+...+...+..+..+... ....+..+.+....
T Consensus 320 ~~~l~~~~~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~~~~-~~~A~~~~~~Al~~ 385 (530)
T 2ooe_A 320 NMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG-IKSGRMIFKKARED 385 (530)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHSSSSCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHhcCCHHHHHHHHHHHhCccccCchHHHHHHHHHHHHhcC-HHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999998733455555555443332 23334555555443
No 253
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=98.07 E-value=3.2e-05 Score=77.66 Aligned_cols=77 Identities=14% Similarity=0.144 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHH----cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCC---CH
Q 015006 235 NLLHLNVAACLLK----LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKS---SE 303 (414)
Q Consensus 235 ~~~~~N~a~~~~k----l~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~l~P~---n~ 303 (414)
..+++|+|.+|.. .+++++|+.++.++++. .++.+++++|.+|.. .+++++|+..|++|++.+|+ +
T Consensus 363 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~A~~~--~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~- 439 (490)
T 2xm6_A 363 KAAQFNLGNALLQGKGVKKDEQQAAIWMRKAAEQ--GLSAAQVQLGEIYYYGLGVERDYVQAWAWFDTASTNDMNLFGT- 439 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHHHCCHHHH-
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHhC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCCCCCcCC-
Confidence 5688999999999 89999999999999886 479999999999999 89999999999999999954 4
Q ss_pred HHHHHHHHHHH
Q 015006 304 PDATAALSKLK 314 (414)
Q Consensus 304 ~~~~~~l~~~~ 314 (414)
..+...|..+.
T Consensus 440 ~~a~~~l~~~~ 450 (490)
T 2xm6_A 440 ENRNITEKKLT 450 (490)
T ss_dssp HHHHHHHTTSC
T ss_pred HHHHHHHHhcC
Confidence 45666665553
No 254
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=98.06 E-value=5.6e-05 Score=61.52 Aligned_cols=83 Identities=18% Similarity=0.239 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHHHcCC---HHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGE---CRKSIEACNKVLDANPA-HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAAL 310 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~---~~~A~~~~~~al~~dp~-~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l 310 (414)
..+.+|.|.|+.+..+ ..+++..+...++.+|. .-..+|.+|.+++++|+|+.|+..++.+|+++|+| ..+....
T Consensus 40 ~qt~F~yAw~Lv~S~~~~d~~~GI~LLe~l~~~~~~~~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N-~QA~~Lk 118 (134)
T 3o48_A 40 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN-KQVGALK 118 (134)
T ss_dssp HHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTC-HHHHHHH
T ss_pred hhhHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCC-HHHHHHH
Confidence 5678999999999876 45689999999998884 57899999999999999999999999999999999 6677777
Q ss_pred HHHHHHHH
Q 015006 311 SKLKKQRQ 318 (414)
Q Consensus 311 ~~~~~~~~ 318 (414)
..++.++.
T Consensus 119 ~~Ie~ki~ 126 (134)
T 3o48_A 119 SMVEDKIQ 126 (134)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766655
No 255
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=98.00 E-value=0.00011 Score=60.63 Aligned_cols=82 Identities=17% Similarity=0.237 Sum_probs=69.8
Q ss_pred hHHHHHHHHHHHHcCCH---HHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGEC---RKSIEACNKVLDANP-AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAAL 310 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~---~~A~~~~~~al~~dp-~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l 310 (414)
..+.+|.|.|+.+..+- .+++..++..+...| ..-..+|.+|.+++++|+|++|+..++..|+++|+| ..+....
T Consensus 39 ~~t~F~YAw~Lv~S~~~~di~~GI~LLe~l~~~~~~~~RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n-~QA~~Lk 117 (144)
T 1y8m_A 39 IQSRFNYAWGLIKSTDVNDERLGVKILTDIYKEAESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNN-KQVGALK 117 (144)
T ss_dssp HHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHCCSTHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCC-HHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCc-HHHHHHH
Confidence 56889999999998864 468889999999888 467799999999999999999999999999999999 5677666
Q ss_pred HHHHHHH
Q 015006 311 SKLKKQR 317 (414)
Q Consensus 311 ~~~~~~~ 317 (414)
..++.++
T Consensus 118 ~~Ie~~i 124 (144)
T 1y8m_A 118 SMVEDKI 124 (144)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665444
No 256
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=97.87 E-value=0.00011 Score=70.67 Aligned_cols=109 Identities=13% Similarity=0.095 Sum_probs=81.7
Q ss_pred HHhhhccccc---cccHHHHHHHHHHHHhhcccCCCCChHHHH---------------------H------------Hhh
Q 015006 189 IRVTGNRLFK---EGKFELAKAKYEKVLRDFNHVNPQDDEEGK---------------------V------------FVG 232 (414)
Q Consensus 189 ~k~~Gn~~fk---~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~---------------------~------------~~~ 232 (414)
+.-+|..++. ...+.+|+.+|.+|+. ++|....-.. . ...
T Consensus 199 l~Lra~~~l~~~~~~~~~~A~~l~e~Al~----lDP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~~a~~a~~~~~ 274 (372)
T 3ly7_A 199 NFYQAHDYLLHGDDKSLNRASELLGEIVQ----SSPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEIDNIVTLPELN 274 (372)
T ss_dssp HHHHHHHHHHHCSHHHHHHHHHHHHHHHH----HCTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHTCGGGT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH----hCCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHHHHHHhcccCC
Confidence 3444555443 3457899999999998 5666422111 0 001
Q ss_pred hhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 233 KRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 233 ~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
....+|.-+|.+++..|++++|+..+++|+.++| ++-+|.-+|.++...|++++|++.|.+|+.++|..
T Consensus 275 ~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln~-s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~ 343 (372)
T 3ly7_A 275 NLSIIYQIKAVSALVKGKTDESYQAINTGIDLEM-SWLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGA 343 (372)
T ss_dssp TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSH
T ss_pred cCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcCC-CHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc
Confidence 1123455566777778999999999999999997 57889999999999999999999999999999985
No 257
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.86 E-value=7.3e-05 Score=82.71 Aligned_cols=107 Identities=22% Similarity=0.309 Sum_probs=85.7
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP- 266 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp- 266 (414)
.+...|..++..|+|.+|+..|.+|- .|..+|.|+.++|+|+.|++.+.+|...++
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA~-----------------------ny~rLA~tLvkLge~q~AIEaarKA~n~~aW 1253 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNVS-----------------------NFGRLASTLVHLGEYQAAVDGARKANSTRTW 1253 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhhh-----------------------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHH
Confidence 45579999999999999999998863 467799999999999999999998844332
Q ss_pred ------------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 267 ------------------------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 267 ------------------------~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
.++..+.+++..|...|.|++|+..|+++|.++|.+ ..+..+|..+..+.+
T Consensus 1254 kev~~acve~~Ef~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~aL~LeraH-~gmftELaiLyaKy~ 1328 (1630)
T 1xi4_A 1254 KEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH-MGMFTELAILYSKFK 1328 (1630)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHHHhccChhH-hHHHHHHHHHHHhCC
Confidence 134455677778889999999999999999999887 567767777655443
No 258
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.86 E-value=7.4e-05 Score=74.53 Aligned_cols=115 Identities=13% Similarity=0.074 Sum_probs=64.0
Q ss_pred HHHhhhccccccc---cHHHHHHHHHHHHhhcccCCCCChH--------------------HH-----HHHhhhhhHHHH
Q 015006 188 KIRVTGNRLFKEG---KFELAKAKYEKVLRDFNHVNPQDDE--------------------EG-----KVFVGKRNLLHL 239 (414)
Q Consensus 188 ~~k~~Gn~~fk~g---~y~~A~~~Y~~al~~~~~~~p~~~~--------------------e~-----~~~~~~~~~~~~ 239 (414)
.+...|..+.+.| ++.+|+..|.+++. ..+.... .. +.. .-...+++
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~----~g~~~a~~~~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~~~a~~ 252 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVS----RGTVTAQRVDSVARVLGDATLGTPDEKTAQALLEKIA-PGYPASWV 252 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH----TTCSCHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGSTHHHH
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHH----CCCHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCCHHHHH
Confidence 3456677777788 99999999999987 3333311 00 001 12234555
Q ss_pred HHHHH-H--HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-----CHHHHHHHHHHHHhhCCCCHHHHHHHHH
Q 015006 240 NVAAC-L--LKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG-----EFEEAQRDFEMMMKVDKSSEPDATAALS 311 (414)
Q Consensus 240 N~a~~-~--~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~-----~~~eA~~~~~~al~l~P~n~~~~~~~l~ 311 (414)
|+|.+ + ...+++.+|+.++.++++. .++.|++++|.+|. .| ++++|+.+|++|+ |.+ ..+...|.
T Consensus 253 ~Lg~~~~~~~~~~d~~~A~~~~~~Aa~~--g~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~-~~A~~~Lg 325 (452)
T 3e4b_A 253 SLAQLLYDFPELGDVEQMMKYLDNGRAA--DQPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GRE-VAADYYLG 325 (452)
T ss_dssp HHHHHHHHSGGGCCHHHHHHHHHHHHHT--TCHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTC-HHHHHHHH
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCC-HHHHHHHH
Confidence 55555 2 3455566666666655543 35556666665555 33 5666666666655 444 44555555
Q ss_pred HHH
Q 015006 312 KLK 314 (414)
Q Consensus 312 ~~~ 314 (414)
.+.
T Consensus 326 ~~y 328 (452)
T 3e4b_A 326 QIY 328 (452)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 259
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=97.84 E-value=0.00022 Score=58.79 Aligned_cols=94 Identities=13% Similarity=0.059 Sum_probs=78.7
Q ss_pred cccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 015006 199 EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMA 278 (414)
Q Consensus 199 ~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a 278 (414)
.+++.+|+..|+++.+ .... .++ +|.+|.....+++|+.++.++.+. .++.|++++|.+
T Consensus 8 ~~d~~~A~~~~~~aa~----~g~~-------------~a~--lg~~y~~g~~~~~A~~~~~~Aa~~--g~~~a~~~Lg~~ 66 (138)
T 1klx_A 8 KKDLKKAIQYYVKACE----LNEM-------------FGC--LSLVSNSQINKQKLFQYLSKACEL--NSGNGCRFLGDF 66 (138)
T ss_dssp HHHHHHHHHHHHHHHH----TTCT-------------THH--HHHHTCTTSCHHHHHHHHHHHHHT--TCHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHc----CCCH-------------hhh--HHHHHHcCCCHHHHHHHHHHHHcC--CCHHHHHHHHHH
Confidence 3589999999999998 3322 233 999999999999999999999987 789999999999
Q ss_pred HHH----cCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHH
Q 015006 279 YMA----LGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQ 316 (414)
Q Consensus 279 ~~~----l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~ 316 (414)
|.. .+++++|+..|++|.+.. + ..+...|..+...
T Consensus 67 y~~G~g~~~d~~~A~~~~~~Aa~~g--~-~~a~~~Lg~~y~~ 105 (138)
T 1klx_A 67 YENGKYVKKDLRKAAQYYSKACGLN--D-QDGCLILGYKQYA 105 (138)
T ss_dssp HHHCSSSCCCHHHHHHHHHHHHHTT--C-HHHHHHHHHHHHH
T ss_pred HHcCCCCCccHHHHHHHHHHHHcCC--C-HHHHHHHHHHHHC
Confidence 999 899999999999999883 3 5677777776543
No 260
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=97.82 E-value=4.7e-05 Score=75.24 Aligned_cols=105 Identities=23% Similarity=0.313 Sum_probs=65.4
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP- 266 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp- 266 (414)
.+...|+.++..|+|++|...|.++ .-|.++|.|+.++|+|.+|++.+.++. +|
T Consensus 124 a~~~IGd~~~~~g~yeeA~~~Y~~a-----------------------~n~~~LA~~L~~Lg~yq~AVea~~KA~--~~~ 178 (449)
T 1b89_A 124 HIQQVGDRCYDEKMYDAAKLLYNNV-----------------------SNFGRLASTLVHLGEYQAAVDGARKAN--STR 178 (449)
T ss_dssp -------------CTTTHHHHHHHT-----------------------TCHHHHHHHHHTTTCHHHHHHHHHHHT--CHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHh-----------------------hhHHHHHHHHHHhccHHHHHHHHHHcC--Cch
Confidence 6667778888888888888888754 135667777777777777777777771 21
Q ss_pred --------------------------CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHH
Q 015006 267 --------------------------AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQ 318 (414)
Q Consensus 267 --------------------------~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~ 318 (414)
.++.-+..+...|...|+|++|+..|+++|.+++.+ -.+-.+|..+..+.+
T Consensus 179 ~Wk~v~~aCv~~~ef~lA~~~~l~L~~~ad~l~~lv~~Yek~G~~eEai~lLe~aL~le~ah-~~~ftel~il~~ky~ 255 (449)
T 1b89_A 179 TWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH-MGMFTELAILYSKFK 255 (449)
T ss_dssp HHHHHHHHHHHTTCHHHHHHTTTTTTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSTTCC-HHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHcCcHHHHHHHHHHHHhCHhhHHHHHHHHHHCCCHHHHHHHHHHHhCCcHHH-HHHHHHHHHHHHhcC
Confidence 122223344577888999999999999999999998 567777777765543
No 261
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.80 E-value=0.00028 Score=70.67 Aligned_cols=93 Identities=11% Similarity=0.079 Sum_probs=46.5
Q ss_pred HHHHHhhhccccc----cccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH----cCCHHHHHHH
Q 015006 186 AEKIRVTGNRLFK----EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK----LGECRKSIEA 257 (414)
Q Consensus 186 a~~~k~~Gn~~fk----~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k----l~~~~~A~~~ 257 (414)
+..+...|..++. .+++.+|+..|++++.. .+ ..+++++|.+|.. .+++.+|+..
T Consensus 39 ~~a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~------~~-----------~~a~~~Lg~~y~~g~g~~~~~~~A~~~ 101 (490)
T 2xm6_A 39 AKAQLELGYRYFQGNETTKDLTQAMDWFRRAAEQ------GY-----------TPAEYVLGLRYMNGEGVPQDYAQAVIW 101 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT------TC-----------HHHHHHHHHHHHHTSSSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHC------CC-----------HHHHHHHHHHHHcCCCCCCCHHHHHHH
Confidence 3344555666665 67777788777777761 11 2344444444444 4444444444
Q ss_pred HHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHh
Q 015006 258 CNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMK 297 (414)
Q Consensus 258 ~~~al~~dp~~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~ 297 (414)
+.++++. .++.+++++|.+|.. .+++++|+..|++|++
T Consensus 102 ~~~a~~~--~~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~ 143 (490)
T 2xm6_A 102 YKKAALK--GLPQAQQNLGVMYHEGNGVKVDKAESVKWFRLAAE 143 (490)
T ss_dssp HHHHHHT--TCHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHC--CCHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 4444432 234444444444444 4444444444444443
No 262
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.79 E-value=0.00015 Score=70.72 Aligned_cols=116 Identities=12% Similarity=0.142 Sum_probs=86.0
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccC------------------CCCChHHHHHH-------------hh
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV------------------NPQDDEEGKVF-------------VG 232 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~------------------~p~~~~e~~~~-------------~~ 232 (414)
.....+...|..+++.|+|++|+..|.+++.+...+ .+...+....+ ..
T Consensus 53 ~~~~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~ 132 (434)
T 4b4t_Q 53 EQETSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVF 132 (434)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCS
T ss_pred hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccH
Confidence 345566777777788888888887777766544322 12221111100 11
Q ss_pred hhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh------CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 233 KRNLLHLNVAACLLKLGECRKSIEACNKVLDA------NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 233 ~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~------dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
++..++.|+|.+|..+|+|.+|+..+.+++.. .+..+.++...|++|..+|+|++|+..|++++.+.
T Consensus 133 ~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~ 205 (434)
T 4b4t_Q 133 LKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAA 205 (434)
T ss_dssp SHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHh
Confidence 34678999999999999999999999999875 34457899999999999999999999999999874
No 263
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=97.74 E-value=0.00011 Score=68.32 Aligned_cols=91 Identities=11% Similarity=0.042 Sum_probs=77.3
Q ss_pred ccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc-----CCHHHHHHHHHHHHHhCCCc-HHH
Q 015006 198 KEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-----GECRKSIEACNKVLDANPAH-VKG 271 (414)
Q Consensus 198 k~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl-----~~~~~A~~~~~~al~~dp~~-~ka 271 (414)
..+....|.....+|++ ++|.. +...+|.-+|..|.+. |+.++|..++++||+++|+. +.+
T Consensus 175 Al~~l~~A~a~lerAle----LDP~~---------~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~ 241 (301)
T 3u64_A 175 LPDTVHAAVMMLERACD----LWPSY---------QEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDH 241 (301)
T ss_dssp CHHHHHHHHHHHHHHHH----HCTTH---------HHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHH
T ss_pred HHHhHHHHHHHHHHHHH----hCCCc---------ccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchH
Confidence 33456677777788887 56653 1267899999999996 99999999999999999975 999
Q ss_pred HHHHHHHHHHc-CCHHHHHHHHHHHHhhCCC
Q 015006 272 LYRRGMAYMAL-GEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 272 ~~r~g~a~~~l-~~~~eA~~~~~~al~l~P~ 301 (414)
++..|..++.. +++++|.+.|++|+..+|.
T Consensus 242 ~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~ 272 (301)
T 3u64_A 242 HITYADALCIPLNNRAGFDEALDRALAIDPE 272 (301)
T ss_dssp HHHHHHHTTTTTTCHHHHHHHHHHHHHCCGG
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHcCCCC
Confidence 99999999885 9999999999999999776
No 264
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.71 E-value=0.00014 Score=80.53 Aligned_cols=108 Identities=18% Similarity=0.143 Sum_probs=82.3
Q ss_pred HhhhccccccccHHHHHHHHHHHHhhccc----C-CCCChHHHHHH--hhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 190 RVTGNRLFKEGKFELAKAKYEKVLRDFNH----V-NPQDDEEGKVF--VGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 190 k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~----~-~p~~~~e~~~~--~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
.+.|..+...|.|++|+..|+++-..... + ...+-+....+ +-....+|+++|.++.++|+|++|+..|.+|
T Consensus 1053 ~eIA~Iai~lglyEEAf~IYkKa~~~~~A~~VLie~i~nldrAiE~Aervn~p~vWsqLAKAql~~G~~kEAIdsYiKA- 1131 (1630)
T 1xi4_A 1053 PDIANIAISNELFEEAFAIFRKFDVNTSAVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKA- 1131 (1630)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHHHHHhhHHHHHHHHHhcCCHHHHHHHHHHHHhCCCHHHHHHHHHhc-
Confidence 44588899999999999999986431110 0 00010110011 1123468999999999999999999999887
Q ss_pred HhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 263 DANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 263 ~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+++.+|++.|.++.++|+|++|++.|.+|.+..++.
T Consensus 1132 ----dD~say~eVa~~~~~lGkyEEAIeyL~mArk~~~e~ 1167 (1630)
T 1xi4_A 1132 ----DDPSSYMEVVQAANTSGNWEELVKYLQMARKKARES 1167 (1630)
T ss_pred ----CChHHHHHHHHHHHHcCCHHHHHHHHHHHHhhcccc
Confidence 899999999999999999999999999999988653
No 265
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=97.70 E-value=0.00021 Score=59.96 Aligned_cols=78 Identities=12% Similarity=0.088 Sum_probs=60.8
Q ss_pred HHHHhhhccccccc---cHHHHHHHHHHHHhhcccCC-CCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 187 EKIRVTGNRLFKEG---KFELAKAKYEKVLRDFNHVN-PQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g---~y~~A~~~Y~~al~~~~~~~-p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
....+.|..+.+.. ++.+|+..+...++ .. |. ....+++|+|.+|+++++|.+|+.+|+++|
T Consensus 33 ~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~----~~~p~----------~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL 98 (152)
T 1pc2_A 33 STQFEYAWCLVRSKYNDDIRKGIVLLEELLP----KGSKE----------EQRDYVFYLAVGNYRLKEYEKALKYVRGLL 98 (152)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHH----HSCHH----------HHHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh----cCCcc----------chHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 44455666666666 77899999999888 22 21 235689999999999999999999999999
Q ss_pred HhCCCcHHHHHHHHHH
Q 015006 263 DANPAHVKGLYRRGMA 278 (414)
Q Consensus 263 ~~dp~~~ka~~r~g~a 278 (414)
+++|+|..|..-+..+
T Consensus 99 ~ieP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 99 QTEPQNNQAKELERLI 114 (152)
T ss_dssp HHCTTCHHHHHHHHHH
T ss_pred hcCCCCHHHHHHHHHH
Confidence 9999998887654433
No 266
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.64 E-value=5e-05 Score=75.39 Aligned_cols=93 Identities=11% Similarity=0.070 Sum_probs=74.7
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
...+..+.+.|..+..+|+|.+|+..|.++|.+.....+.+ +......++|+|.+|..+|+|++|+..+.+|+
T Consensus 326 ~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~-------Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 326 IYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGS-------HPVRGVQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCC-------ChHHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 34577888899999999999999999999999876655555 45668899999999999999999999999999
Q ss_pred HhC-----CCc---HHHHHHHHHHHHHc
Q 015006 263 DAN-----PAH---VKGLYRRGMAYMAL 282 (414)
Q Consensus 263 ~~d-----p~~---~ka~~r~g~a~~~l 282 (414)
++- |++ ...+.+++.++..+
T Consensus 399 ~i~~~~lG~~Hp~~~~~~~~l~~~~~e~ 426 (429)
T 3qwp_A 399 DIMRVTHGREHSLIEDLILLLEECDANI 426 (429)
T ss_dssp HHHHHHTCTTSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCChHHHHHHHHHHHHHHHH
Confidence 763 554 34445566666544
No 267
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00017 Score=70.39 Aligned_cols=105 Identities=13% Similarity=0.090 Sum_probs=87.0
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+..+...|+.++..|+|.+|+..+.+++..+...... .....++++++.+|..+++|.+|...+++++.+
T Consensus 134 ~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~ 204 (434)
T 4b4t_Q 134 KHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDK---------PSLVDVHLLESKVYHKLRNLAKSKASLTAARTA 204 (434)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCS---------THHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccc---------hhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 35667788999999999999999999999876544332 234678999999999999999999999999877
Q ss_pred CC---C--c--HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 265 NP---A--H--VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 265 dp---~--~--~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
.+ . . ...+...|..+...++|++|..+|..+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~~ 245 (434)
T 4b4t_Q 205 ANSIYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFES 245 (434)
T ss_dssp HHHSCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHH
T ss_pred hhcCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 43 2 1 456677899999999999999999999875
No 268
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.58 E-value=9.7e-05 Score=73.34 Aligned_cols=75 Identities=11% Similarity=0.015 Sum_probs=65.0
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..+..+.+.|..+..+|+|++|+..|.++|.+....-+.+ +...+..++|+|.+|..+|+|++|+..+.+||+
T Consensus 338 ~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~-------Hp~~a~~l~nLa~~~~~qg~~~eA~~~~~~Al~ 410 (433)
T 3qww_A 338 YMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVY-------SLNVASMWLKLGRLYMGLENKAAGEKALKKAIA 410 (433)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSS-------CHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCC-------ChHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 3467788999999999999999999999999876655544 455688999999999999999999999999997
Q ss_pred hC
Q 015006 264 AN 265 (414)
Q Consensus 264 ~d 265 (414)
+-
T Consensus 411 i~ 412 (433)
T 3qww_A 411 IM 412 (433)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 269
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=97.55 E-value=0.00043 Score=68.96 Aligned_cols=74 Identities=15% Similarity=0.096 Sum_probs=63.5
Q ss_pred hHHHHHHHHHHHHcC-----CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHH----cCCHHHHHHHHHHHHhhCCCCHHH
Q 015006 235 NLLHLNVAACLLKLG-----ECRKSIEACNKVLDANPAHVKGLYRRGMAYMA----LGEFEEAQRDFEMMMKVDKSSEPD 305 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~-----~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~----l~~~~eA~~~~~~al~l~P~n~~~ 305 (414)
..+++|+|.+|. .| ++.+|+.++.+|+ +.++.|++++|.+|.. ..++++|+..|++|.+... ..
T Consensus 283 ~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa---~g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~---~~ 355 (452)
T 3e4b_A 283 PRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV---GREVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQ---NS 355 (452)
T ss_dssp HHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT---TTCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTC---TT
T ss_pred HHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh---CCCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhCh---HH
Confidence 568999999998 45 9999999999998 8999999999999988 4599999999999998653 34
Q ss_pred HHHHHHHHHH
Q 015006 306 ATAALSKLKK 315 (414)
Q Consensus 306 ~~~~l~~~~~ 315 (414)
+...|..+..
T Consensus 356 A~~~Lg~~y~ 365 (452)
T 3e4b_A 356 ADFAIAQLFS 365 (452)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 6777777764
No 270
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.50 E-value=0.00039 Score=65.57 Aligned_cols=86 Identities=15% Similarity=0.045 Sum_probs=71.8
Q ss_pred ccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----------CCCcH
Q 015006 200 GKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA----------NPAHV 269 (414)
Q Consensus 200 g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~----------dp~~~ 269 (414)
+++..|...|.++.. ..|.. ....+++| |++++|+|++|...+..+++. +|+++
T Consensus 192 ~~~q~A~~~f~El~~----~~p~~---------~~~~lLln---~~~~~g~~~eAe~~L~~l~~~~p~~~~k~~~~p~~~ 255 (310)
T 3mv2_B 192 ETATSNFYYYEELSQ----TFPTW---------KTQLGLLN---LHLQQRNIAEAQGIVELLLSDYYSVEQKENAVLYKP 255 (310)
T ss_dssp STTTHHHHHHHHHHT----TSCSH---------HHHHHHHH---HHHHHTCHHHHHHHHHHHHSHHHHTTTCHHHHSSHH
T ss_pred ccHHHHHHHHHHHHH----hCCCc---------ccHHHHHH---HHHHcCCHHHHHHHHHHHHHhcccccccccCCCCCH
Confidence 389999999999877 33321 01335556 899999999999999988876 58999
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 015006 270 KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 303 (414)
Q Consensus 270 ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~ 303 (414)
.++.++..+...+|+ +|.+.+.++.+++|++.
T Consensus 256 ~~LaN~i~l~~~lgk--~a~~l~~qL~~~~P~hp 287 (310)
T 3mv2_B 256 TFLANQITLALMQGL--DTEDLTNQLVKLDHEHA 287 (310)
T ss_dssp HHHHHHHHHHHHTTC--TTHHHHHHHHHTTCCCH
T ss_pred HHHHHHHHHHHHhCh--HHHHHHHHHHHhCCCCh
Confidence 999999999999998 99999999999999993
No 271
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=97.49 E-value=0.00087 Score=56.71 Aligned_cols=101 Identities=15% Similarity=0.123 Sum_probs=76.7
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP-- 266 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp-- 266 (414)
+.+....++..+.|..|+..+..++..... ++.- ..-.....++..+|.+++..++|..|...|.+||.+..
T Consensus 23 l~dqik~L~d~~LY~sA~~La~lLlSl~~~-~~~~-----~sp~~~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l 96 (167)
T 3ffl_A 23 VIDHVRDMAAAGLHSNVRLLSSLLLTLSNN-NPEL-----FSPPQKYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKAL 96 (167)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHH-STTS-----SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhhcC-Cccc-----ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH
Confidence 445666778889999999999998885432 1110 00123466888999999999999999999999975531
Q ss_pred -Cc----------------------HHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 267 -AH----------------------VKGLYRRGMAYMALGEFEEAQRDFEMM 295 (414)
Q Consensus 267 -~~----------------------~ka~~r~g~a~~~l~~~~eA~~~~~~a 295 (414)
.+ +...|+.|.||.+++++++|+..++..
T Consensus 97 ~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~Ai~~Le~I 148 (167)
T 3ffl_A 97 SKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDAIAILDGI 148 (167)
T ss_dssp --------------------CCCCHHHHHHHHHHHHHHTTCHHHHHHHHHTS
T ss_pred hcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHHHHHHhcC
Confidence 11 257799999999999999999987754
No 272
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.26 E-value=0.00064 Score=52.10 Aligned_cols=68 Identities=16% Similarity=0.173 Sum_probs=56.6
Q ss_pred HHHHHhhhcccccccc---HHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGK---FELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVL 262 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~---y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al 262 (414)
+..+...|..++-.++ ..+|...+.+||. ++|.+ ..+++.+|..+++.|+|.+|+..+.+++
T Consensus 6 ~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~----~dp~~-----------~rA~~~lg~~~~~~g~y~~Ai~~w~~~l 70 (93)
T 3bee_A 6 ATQLAAKATTLYYLHKQAMTDEVSLLLEQALQ----LEPYN-----------EAALSLIANDHFISFRFQEAIDTWVLLL 70 (93)
T ss_dssp HHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHH----HCTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHH----HCcCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3445555666653333 7899999999999 78888 7788899999999999999999999999
Q ss_pred HhCCCc
Q 015006 263 DANPAH 268 (414)
Q Consensus 263 ~~dp~~ 268 (414)
+.+|..
T Consensus 71 ~~~p~~ 76 (93)
T 3bee_A 71 DSNDPN 76 (93)
T ss_dssp TCCCTT
T ss_pred hhCCCC
Confidence 999974
No 273
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=97.21 E-value=0.0087 Score=58.31 Aligned_cols=126 Identities=16% Similarity=0.161 Sum_probs=97.3
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCC-C---CC---hHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHH
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVN-P---QD---DEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEAC 258 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~-p---~~---~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~ 258 (414)
...+...|......|+...|+..|.+|+..+..-. + .. ..+...+.+.+..+...++.+++.+|++.+|+..+
T Consensus 115 f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l 194 (388)
T 2ff4_A 115 FVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAEL 194 (388)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
Confidence 34445556566667899999999999998653211 1 11 22334566777788888999999999999999999
Q ss_pred HHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh-------hCCCCHHHHHHHHHHH
Q 015006 259 NKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK-------VDKSSEPDATAALSKL 313 (414)
Q Consensus 259 ~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~-------l~P~n~~~~~~~l~~~ 313 (414)
..++..+|-+-.++..+-.||...|+..+|++.|+++-+ ++|. +..+.....+
T Consensus 195 ~~~~~~~P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~--~~l~~l~~~i 254 (388)
T 2ff4_A 195 EALTFEHPYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPG--PTLRALNERI 254 (388)
T ss_dssp HHHHHHSTTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCC--HHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCC--HHHHHHHHHH
Confidence 999999999999999999999999999999999988744 4776 4455544443
No 274
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.09 E-value=0.0029 Score=59.59 Aligned_cols=64 Identities=17% Similarity=0.138 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDANP--AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 300 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~dp--~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P 300 (414)
.+..+|.++...|++++|+..|.++|..+| .+..++...+++++.+|+.+.|.+.++++.+.+|
T Consensus 102 ~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A~k~l~~~~~~~~ 167 (310)
T 3mv2_B 102 ELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTASTIFDNYTNAIE 167 (310)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCc
Confidence 446799999999999999999999999997 8999999999999999999999999999999998
No 275
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=97.07 E-value=9.7e-05 Score=62.96 Aligned_cols=34 Identities=12% Similarity=-0.130 Sum_probs=27.5
Q ss_pred CccccCCcCcEEEEEEcCCCcCC---------CCCCCCCCCCC
Q 015006 1 MGIGTMTREEKAVIYVTSQYLTP---------SPLMPVVEGCE 34 (414)
Q Consensus 1 ~~~~~m~~Ge~~~~~i~~~~~~g---------~~~~~~ip~~~ 34 (414)
.||.+|++||+++|+|||+|||| +...+.+|++.
T Consensus 74 ~gl~~M~~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~ 116 (165)
T 2lkn_A 74 TIVCTMREGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEG 116 (165)
T ss_dssp HHHTTCCTTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTT
T ss_pred HHHhcCccCceEEEEECHHHhcCCcchhhhhhhccccCCCccc
Confidence 37899999999999999999999 23346666654
No 276
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=96.97 E-value=0.00094 Score=66.12 Aligned_cols=72 Identities=18% Similarity=0.159 Sum_probs=59.5
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccCCCCCceEEEcCCCCchHHHHHHhhhcCCCCeEEEEecCCCccccCCCCCCCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVDNDGQPLEFSSGEGLVPEGFEMCVRLMLPGEIALVTCPPDYAYDKFLRPANVP 154 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~~~~~p~~f~lG~~~v~~gle~~l~~M~~GE~~~v~i~~~~~yg~~~~~~~ip 154 (414)
..||.|+|+|+|+. +|..|..+. +.++.|.+|.|. + |+.+|.+|++||...|.+. |
T Consensus 156 ~~gD~V~id~~~~~---dG~~~~~~~----~~~~~l~~g~~~--~-fe~~liG~k~Ge~~~~~vt----F---------- 211 (433)
T 3gty_X 156 EAGDLVRVNMEVYN---EEGKKLTSR----EYEYVISEDEDR--P-FVKDLVGKKKGDVVEIERE----Y---------- 211 (433)
T ss_dssp CTTSEEEEEEEEEC---TTSCEEEEE----EEEEECCSSCCC--T-THHHHTTCCTTCEEEEEEE----E----------
T ss_pred CCCCEEEEEEEEEE---CCEECcCCC----CCCeEEEecCCc--h-HHHHhCCCCCCceEEEEEe----e----------
Confidence 47999999999983 488885443 468899999987 3 9999999999999999983 2
Q ss_pred CCcceEEEEEEcccCC
Q 015006 155 EGAHIQWEIELLGFEK 170 (414)
Q Consensus 155 ~~~~l~~eieL~~~~~ 170 (414)
+|.+..|.|+|.++..
T Consensus 212 aGk~a~F~VtV~~Ik~ 227 (433)
T 3gty_X 212 EGKKYTYKLEVEEVYK 227 (433)
T ss_dssp TTEEEEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEEEEE
Confidence 4678999999998865
No 277
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=96.94 E-value=0.00024 Score=56.67 Aligned_cols=39 Identities=23% Similarity=0.216 Sum_probs=31.2
Q ss_pred ccccCCcCcEEEEEEc-CCCcCCCCCCCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVT-SQYLTPSPLMPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~-~~~~~g~~~~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||+..|.|+ |+. ||..+ .++++|+|+|+|+++
T Consensus 73 ~L~Gmk~Ge~~~v~i~fP~~-Yg~~~----~~g~~l~F~V~l~~V 112 (113)
T 1hxv_A 73 GLIAMKVNQKKTLALTFPSD-YHVKE----LQSKPVTFEVVLKAI 112 (113)
T ss_dssp HHHTSCSSEEEEECCCCCTT-SSSSG----GGSCCCEEEEEECCB
T ss_pred HHCCCCCCCEEEEEEeCchh-hCcCC----CCCCEEEEEEEEEEE
Confidence 6889999999999995 443 77643 356999999999864
No 278
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=96.88 E-value=0.0015 Score=56.09 Aligned_cols=24 Identities=8% Similarity=-0.101 Sum_probs=22.5
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCC
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSP 25 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~ 25 (414)
||.+|++||+..|.|||+.|||..
T Consensus 48 aL~Gm~~Ge~~~v~ippe~aYG~~ 71 (171)
T 2k8i_A 48 ALEGHEVGDKFDVAVGANDAYGQY 71 (171)
T ss_dssp HHTTCCTTCEEEEEEETTTSSCCC
T ss_pred HHcCCCCCCEEEEEECcHHhcCCC
Confidence 689999999999999999999975
No 279
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=96.58 E-value=0.016 Score=46.69 Aligned_cols=43 Identities=14% Similarity=0.150 Sum_probs=37.8
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRG 276 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g 276 (414)
+..+++.+|.+++|+|+|..|+.+|+.+|+++|+|..|.--+.
T Consensus 73 ~Rd~lY~LAvg~yklg~Y~~A~~~~~~lL~~eP~n~QA~~Lk~ 115 (126)
T 1nzn_A 73 QRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELER 115 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCCCCHHHHHHHH
Confidence 3568889999999999999999999999999999988765443
No 280
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=96.50 E-value=0.00094 Score=65.96 Aligned_cols=52 Identities=15% Similarity=0.059 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMM 295 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~a 295 (414)
..+.++|.+++..|.|++|+..+.++ ..|.++|.++.++|+|++|++.+++|
T Consensus 123 ~a~~~IGd~~~~~g~yeeA~~~Y~~a--------~n~~~LA~~L~~Lg~yq~AVea~~KA 174 (449)
T 1b89_A 123 AHIQQVGDRCYDEKMYDAAKLLYNNV--------SNFGRLASTLVHLGEYQAAVDGARKA 174 (449)
T ss_dssp --------------CTTTHHHHHHHT--------TCHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHh--------hhHHHHHHHHHHhccHHHHHHHHHHc
Confidence 48899999999999999999999977 47899999999999999999999999
No 281
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=96.36 E-value=0.0021 Score=57.73 Aligned_cols=25 Identities=12% Similarity=-0.025 Sum_probs=23.0
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCC
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPL 26 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~ 26 (414)
||.+|++||+..|.|||++|||...
T Consensus 60 aL~Gm~vGek~~v~Ippe~AYGe~~ 84 (231)
T 3prb_A 60 AILEMDVGEEREVVLPPEKAFGKRD 84 (231)
T ss_dssp HHHTCCTTCEEEEEECGGGTTCCCC
T ss_pred HHcCCCCCCEEEEEeCcHHhcCCCC
Confidence 6889999999999999999999854
No 282
>3o48_A Mitochondria fission 1 protein; tetratricopeptide repeat fold, TPR, scaffold, peroxisome, membrane fission, protein binding; 1.75A {Saccharomyces cerevisiae} PDB: 2pqr_A 2pqn_A 3uux_A
Probab=96.30 E-value=0.011 Score=47.90 Aligned_cols=43 Identities=12% Similarity=0.062 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHH
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRG 276 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g 276 (414)
+..+++-+|.+++|+|+|..|+.+|+.+|+++|+|..|.--+.
T Consensus 77 ~Rd~LYyLAvg~yklgdY~~Ar~y~d~lL~~eP~N~QA~~Lk~ 119 (134)
T 3o48_A 77 RRECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALKS 119 (134)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCTTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhCCCCHHHHHHHH
Confidence 3568888999999999999999999999999999988764443
No 283
>1y8m_A FIS1; mitochondria, unknown function; NMR {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=96.28 E-value=0.018 Score=47.37 Aligned_cols=41 Identities=10% Similarity=0.024 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRR 275 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~ 275 (414)
..+++.+|.+++|+|+|..|+.+|+.+|+++|+|..|.--+
T Consensus 77 RdcLYyLAvg~ykl~~Y~~Ar~y~d~lL~~eP~n~QA~~Lk 117 (144)
T 1y8m_A 77 RECLYYLTIGCYKLGEYSMAKRYVDTLFEHERNNKQVGALK 117 (144)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHHTCCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 45888899999999999999999999999999998775443
No 284
>3ffl_A Anaphase-promoting complex subunit 7; tetratricopeptide repeat motif, helis-turn-helix, cell cycle division, mitosis, TPR repeat; 2.50A {Homo sapiens}
Probab=96.04 E-value=0.012 Score=49.61 Aligned_cols=94 Identities=13% Similarity=0.171 Sum_probs=61.6
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCCh--------HHHH--HHhhhhhHHHHHHHHHHHHcCCHHHH
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDD--------EEGK--VFVGKRNLLHLNVAACLLKLGECRKS 254 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~--------~e~~--~~~~~~~~~~~N~a~~~~kl~~~~~A 254 (414)
.++.+.-.|+.+|..++|.+|...|++||.....+.-... .... .....-..+.+.+|.||++++++.+|
T Consensus 62 ~~~~l~~ladalf~~~eyrrA~~~y~qALq~~k~l~k~~s~~~~~~~~ss~p~s~~~~~e~Elkykia~C~~~l~~~~~A 141 (167)
T 3ffl_A 62 KYQLLVYHADSLFHDKEYRNAVSKYTMALQQKKALSKTSKVRPSTGNSASTPQSQCLPSEIEVKYKLAECYTVLKQDKDA 141 (167)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHCC--------------------CCCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhcCCCccccccccCCCcccccccchHHHHHHHHHHHHHHCCHHHH
Confidence 4677788999999999999999999999986653211000 0000 00001135778899999999999999
Q ss_pred HHHHHHHHHhCCCcHHHHHHHHHHH
Q 015006 255 IEACNKVLDANPAHVKGLYRRGMAY 279 (414)
Q Consensus 255 ~~~~~~al~~dp~~~ka~~r~g~a~ 279 (414)
+...+.+ -...-+++.-.-+|+.|
T Consensus 142 i~~Le~I-p~k~Rt~kvnm~LakLy 165 (167)
T 3ffl_A 142 IAILDGI-PSRQRTPKINMLLANLY 165 (167)
T ss_dssp HHHHHTS-CGGGCCHHHHHHHHHHC
T ss_pred HHHHhcC-CchhcCHHHHHHHHHHh
Confidence 9887653 11123566666666544
No 285
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=95.97 E-value=0.013 Score=54.35 Aligned_cols=62 Identities=18% Similarity=0.233 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhCCC--cHHHHHHHHHHHHHc-----CCHHHHHHHHHHHHhhCCCCHHHHHHHHHH
Q 015006 251 CRKSIEACNKVLDANPA--HVKGLYRRGMAYMAL-----GEFEEAQRDFEMMMKVDKSSEPDATAALSK 312 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~--~~ka~~r~g~a~~~l-----~~~~eA~~~~~~al~l~P~n~~~~~~~l~~ 312 (414)
...|....++||++||+ +..||.-+|..|..+ |+.+.|.+.|++||+++|+....+...+..
T Consensus 179 l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~LnP~~~id~~v~YA~ 247 (301)
T 3u64_A 179 VHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTRYCSAHDPDHHITYAD 247 (301)
T ss_dssp HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHHHCCTTCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHHhCCCCCchHHHHHHH
Confidence 67888999999999999 677999999999996 999999999999999999642444444444
No 286
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=95.84 E-value=0.19 Score=41.61 Aligned_cols=109 Identities=6% Similarity=-0.005 Sum_probs=80.0
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN 265 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d 265 (414)
+..+-..|+.+-. +-..+-...|++|+..++ |. . .......+.++.+.|.- ..+++.++|.+.|+.++.+.
T Consensus 20 l~llE~~g~p~~d-~~l~rlrd~YerAia~~P---p~-k---~~~wrrYI~LWIrYA~~-~ei~D~d~aR~vy~~a~~~h 90 (161)
T 4h7y_A 20 LLKLEKNSVPLSD-ALLNKLIGRYSQAIEALP---PD-K---YGQNESFARIQVRFAEL-KAIQEPDDARDYFQMARANC 90 (161)
T ss_dssp HHHHHHHTCSCCH-HHHHHHHHHHHHHHHHSC---GG-G---GTTCHHHHHHHHHHHHH-HHHHCGGGCHHHHHHHHHHC
T ss_pred HHHHHHcCCCchh-hHHHHHHHHHHHHHHcCC---cc-c---cccHHHHHHHHHHHHHH-HHhcCHHHHHHHHHHHHHHh
Confidence 3333333554433 444677889999998532 22 1 22233345566666644 66799999999999999988
Q ss_pred CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCH
Q 015006 266 PAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSE 303 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~ 303 (414)
...+|.|.-.|+--...|++..|+..+.+|+.+.|...
T Consensus 91 KkFAKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~ 128 (161)
T 4h7y_A 91 KKFAFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPL 128 (161)
T ss_dssp TTBHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCH
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcH
Confidence 88888888889988999999999999999999999863
No 287
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=95.56 E-value=0.035 Score=46.75 Aligned_cols=38 Identities=13% Similarity=-0.094 Sum_probs=32.0
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||+..|.|||+.|||.. +..++++|.+-.|.
T Consensus 43 aL~Gm~~Ge~~~v~ipp~~aYG~~-------~~~lv~~v~~~~f~ 80 (158)
T 3cgm_A 43 ALEGREEGEAFQAHVPAEKAYGPH-------DPEGVQVVPLSAFP 80 (158)
T ss_dssp HHTTCBTTCEEEEEECGGGTTCCC-------CGGGEEEEEGGGSC
T ss_pred HHcCCCCCCEEEEEECcHHHcCCC-------CcceEEEEEHHHCC
Confidence 688999999999999999999964 46677888776663
No 288
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=95.42 E-value=0.011 Score=50.50 Aligned_cols=37 Identities=5% Similarity=-0.006 Sum_probs=30.1
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||++|||.. +..++.+|..-.|
T Consensus 71 aL~gm~~Ge~~~v~Ipp~~AYG~~-------~~~lv~~vp~~~f 107 (169)
T 4dt4_A 71 HLLGLKVGDKTTFSLEPDAAFGVP-------SPDLIQYFSRREF 107 (169)
T ss_dssp HHTTCCTTCEEEEEECGGGTTCCC-------CGGGEEEEEGGGG
T ss_pred HHcCCCCCCEEEEEEChHHhcCCC-------ChHHEEEeCHHHC
Confidence 689999999999999999999973 4556666665554
No 289
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=95.40 E-value=0.12 Score=54.41 Aligned_cols=59 Identities=17% Similarity=0.172 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMM 295 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~a 295 (414)
++.-.|.-++..++|+-|+..+.+|+..-|.....|++++.+|..+|+|+.|+-.+..+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~~aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTELALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 44445666778899999999999999999999999999999999999999999876655
No 290
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=95.14 E-value=0.015 Score=50.93 Aligned_cols=37 Identities=11% Similarity=-0.094 Sum_probs=28.9
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||+..|.|||+.|||.. +..+++.|.+-.|
T Consensus 48 aL~Gm~vGe~~~v~Ippe~aYGe~-------~~~lV~~vp~~~f 84 (196)
T 2kfw_A 48 ALEGHEVGDKFDVAVGANDAYGQY-------DENLVQRVPKDVF 84 (196)
T ss_dssp HHSSSCTTCEEEEECSTTTTSSCC-------CTTTCEEECGGGC
T ss_pred HHcCCCCCCEEEEEeCcHHhcCCC-------ChhhEEEEEHHHC
Confidence 689999999999999999999974 3345555555544
No 291
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=95.13 E-value=0.08 Score=44.16 Aligned_cols=37 Identities=8% Similarity=-0.120 Sum_probs=29.9
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||++.|.|||+.|||.. +..+++.|..-.|
T Consensus 53 aL~gm~~Ge~~~v~ipp~~aYG~~-------~~~~v~~v~~~~f 89 (151)
T 2kr7_A 53 AVLKAQIGEWEEVVIAPEEAYGVY-------ESSYLQEVPRDQF 89 (151)
T ss_dssp HHTTCCBTCEEEEEECGGGTTCSS-------CSCEEEEEEGGGG
T ss_pred HHcCCCCCCEEEEEEecHHHcCCC-------CcceEEEEcHHHc
Confidence 689999999999999999999974 3456666666555
No 292
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.84 E-value=0.041 Score=57.54 Aligned_cols=98 Identities=10% Similarity=0.018 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHh-CCCcHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDA-NPAHVKGLYRRGMAYMALGE-FEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~-dp~~~ka~~r~g~a~~~l~~-~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
++...+....+.+..+.|...+.+|+.. .+...+.|...|..-...++ ++.|...|+++|+..|++ .........+.
T Consensus 436 vWi~y~~~erR~~~l~~AR~vf~~A~~~~~~~~~~lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~-~~~w~~y~~fe 514 (679)
T 4e6h_A 436 VYCVYMNTMKRIQGLAASRKIFGKCRRLKKLVTPDIYLENAYIEYHISKDTKTACKVLELGLKYFATD-GEYINKYLDFL 514 (679)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHTGGGSCTHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTC-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCc-hHHHHHHHHHH
Confidence 3444444445556667777777777665 33445555555555555543 777777777777777766 34432222222
Q ss_pred HHHHHHHHHHHHHHHhhccCCC
Q 015006 315 KQRQEVESKARKQFKGLFDKKP 336 (414)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~ 336 (414)
.... ...+.+..|.......+
T Consensus 515 ~~~~-~~~~AR~lferal~~~~ 535 (679)
T 4e6h_A 515 IYVN-EESQVKSLFESSIDKIS 535 (679)
T ss_dssp HHHT-CHHHHHHHHHHHTTTSS
T ss_pred HhCC-CHHHHHHHHHHHHHhcC
Confidence 2221 23445667776666554
No 293
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=94.77 E-value=0.29 Score=51.13 Aligned_cols=102 Identities=11% Similarity=-0.003 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHcC-CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC--CHHHHHHHHHHH
Q 015006 237 LHLNVAACLLKLG-ECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS--SEPDATAALSKL 313 (414)
Q Consensus 237 ~~~N~a~~~~kl~-~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~--n~~~~~~~l~~~ 313 (414)
+|...|..-.+.+ +++.|...+..+|+..|+++..+...+......|+.+.|+..|++|+...|+ ....+.......
T Consensus 471 lyi~~A~lE~~~~~d~e~Ar~ife~~Lk~~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~~~~~~~~~lw~~~~~f 550 (679)
T 4e6h_A 471 IYLENAYIEYHISKDTKTACKVLELGLKYFATDGEYINKYLDFLIYVNEESQVKSLFESSIDKISDSHLLKMIFQKVIFF 550 (679)
T ss_dssp HHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTSSSTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Confidence 4555555555554 4999999999999999999998888888888999999999999999999884 112333333333
Q ss_pred HHHHHHHHHHHHHHHHhhccCCCCCc
Q 015006 314 KKQRQEVESKARKQFKGLFDKKPGEI 339 (414)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (414)
+..... ....++.++++....+.+.
T Consensus 551 E~~~G~-~~~~~~v~~R~~~~~P~~~ 575 (679)
T 4e6h_A 551 ESKVGS-LNSVRTLEKRFFEKFPEVN 575 (679)
T ss_dssp HHHTCC-SHHHHHHHHHHHHHSTTCC
T ss_pred HHHcCC-HHHHHHHHHHHHHhCCCCc
Confidence 333221 2345777788887777653
No 294
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=94.74 E-value=0.16 Score=49.25 Aligned_cols=99 Identities=16% Similarity=0.134 Sum_probs=79.3
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-----
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN----- 265 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d----- 265 (414)
..|..++..|+|.+|...+.+.+..+...+. ..+...+|......|..++++.++...+.+|....
T Consensus 104 kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd---------~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~ 174 (394)
T 3txn_A 104 RLIALYFDTALYTEALALGAQLLRELKKLDD---------KNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYC 174 (394)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHTTSSC---------THHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhcccc---------chhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCC
Confidence 5788899999999999999999998765432 23557789999999999999999999998886543
Q ss_pred CCcHHHH--HHHHHHHH-HcCCHHHHHHHHHHHHhh
Q 015006 266 PAHVKGL--YRRGMAYM-ALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 266 p~~~ka~--~r~g~a~~-~l~~~~eA~~~~~~al~l 298 (414)
|....|. .--|..++ ..++|..|-..|-.+++-
T Consensus 175 ~p~i~a~i~~~~Gi~~l~~~rdyk~A~~~F~eaf~~ 210 (394)
T 3txn_A 175 PPKVQGALDLQSGILHAADERDFKTAFSYFYEAFEG 210 (394)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHhccCHHHHHHHHHHHHhc
Confidence 1223343 34588888 899999999999999754
No 295
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=94.73 E-value=0.007 Score=51.05 Aligned_cols=24 Identities=13% Similarity=0.029 Sum_probs=22.4
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCC
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSP 25 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~ 25 (414)
||.+|++||++.|.|||++|||..
T Consensus 60 aL~gm~~Ge~~~v~Ipp~~aYG~~ 83 (157)
T 3pr9_A 60 AILEMDVGEEREVVLPPEKAFGKR 83 (157)
T ss_dssp HHHHCCTTCEEEEEECGGGTTCCC
T ss_pred HHcCCCCCCEEEEEECcHHhcCCC
Confidence 688999999999999999999974
No 296
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=94.65 E-value=0.27 Score=41.56 Aligned_cols=68 Identities=15% Similarity=0.103 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH--hC---------------CCcHHHH-HHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLD--AN---------------PAHVKGL-YRRGMAYMALGEFEEAQRDFEMMM 296 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~--~d---------------p~~~ka~-~r~g~a~~~l~~~~eA~~~~~~al 296 (414)
++..+--+.||.++++|..|+...+..|+ ++ |.+-..+ .-+|..+..+|+-++|+..|....
T Consensus 62 ~Ts~YYk~LCy~klKdYkkA~~~le~il~~kvd~d~~~d~~~~~ffvd~~DkEfFy~l~a~lltq~g~r~EaI~y~~~Sf 141 (242)
T 3kae_A 62 CTSKYYESLCYKKKKDYKKAIKSLESILEGKVERDPDVDARIQEMFVDPGDEEFFESLLGDLCTLSGYREEGIGHYVRSF 141 (242)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCSBCCCCCCHHHHTTSCCTTCHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCcccccccceeeeccchHHHHHHHHHHHHHHhcCHHHhhhHhhhhc
Confidence 34444578999999999999999999992 22 3344443 446999999999999999999999
Q ss_pred hhCCCC
Q 015006 297 KVDKSS 302 (414)
Q Consensus 297 ~l~P~n 302 (414)
...|=.
T Consensus 142 ~~~~lf 147 (242)
T 3kae_A 142 GKSFLF 147 (242)
T ss_dssp HHCCCH
T ss_pred CCcccc
Confidence 998864
No 297
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=94.44 E-value=0.013 Score=49.07 Aligned_cols=37 Identities=5% Similarity=0.012 Sum_probs=30.0
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHL 45 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~ 45 (414)
||.+|++||+..|.|||++|||.. +..++++|.+..|
T Consensus 61 aL~gm~~Ge~~~v~ipp~~aYG~~-------~~~~v~~v~~~~f 97 (151)
T 1ix5_A 61 AVLDMEVGDEKTVKIPAEKAYGNR-------NEMLIQKIPRDAF 97 (151)
T ss_dssp HHHTCCTTCCCEEEECTTTSSCSC-------CSTTBCCEETHHH
T ss_pred HHcCCCCCCEEEEEECcHHHCCCC-------CccEEEEEEHHHc
Confidence 688999999999999999999974 3456666666555
No 298
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=94.00 E-value=0.38 Score=43.87 Aligned_cols=61 Identities=18% Similarity=0.158 Sum_probs=57.1
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHH
Q 015006 244 CLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEP 304 (414)
Q Consensus 244 ~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~ 304 (414)
..++.+...+|+..+...++-+|.|++...-+-+.++-.|+|+.|..-++.+.+++|+...
T Consensus 6 ~ll~~g~L~~al~~~~~~VR~~P~da~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~ 66 (273)
T 1zbp_A 6 NALSEGQLQQALELLIEAIKASPKDASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLP 66 (273)
T ss_dssp HHTTTTCHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHH
T ss_pred HHHhCCCHHHHHHHHHHHHHhCCcCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhH
Confidence 4578899999999999999999999999999999999999999999999999999998643
No 299
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=93.58 E-value=0.074 Score=52.42 Aligned_cols=41 Identities=20% Similarity=0.088 Sum_probs=35.4
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||+..|.|++..+||... .++.+++|+|+|.++.
T Consensus 201 ~L~G~k~Ge~~~v~v~~~~~yg~~~----lag~~~~F~V~v~~v~ 241 (432)
T 1w26_A 201 GIKGHKAGEEFTIDVTFPEEYHAEN----LKGKAAKFAINLKKVE 241 (432)
T ss_dssp HSSSCCSSCEEEEEEECCTTCSCTT----TSSCEEEEEEECCEEC
T ss_pred HhCCCCCCCEEEEEECCchhhCCCC----CCCceEEEEEEEEEEe
Confidence 6889999999999999999999743 2558999999998864
No 300
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=93.43 E-value=0.22 Score=47.85 Aligned_cols=69 Identities=13% Similarity=0.109 Sum_probs=55.5
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHH
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVK 270 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~k 270 (414)
..|..++..|+++.|+..+++|+. ++|. ...|.-+|.++.-.|++++|+..+.+|+.++|...
T Consensus 282 alal~~l~~gd~d~A~~~l~rAl~----Ln~s------------~~a~~llG~~~~~~G~~~eA~e~~~~AlrL~P~~~- 344 (372)
T 3ly7_A 282 IKAVSALVKGKTDESYQAINTGID----LEMS------------WLNYVLLGKVYEMKGMNREAADAYLTAFNLRPGAN- 344 (372)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHH----HCCC------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCSHH-
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHh----cCCC------------HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcC-
Confidence 355556678999999999999999 4432 34667789999999999999999999999999764
Q ss_pred HHHHHH
Q 015006 271 GLYRRG 276 (414)
Q Consensus 271 a~~r~g 276 (414)
.|+...
T Consensus 345 t~~~~~ 350 (372)
T 3ly7_A 345 TLYWIE 350 (372)
T ss_dssp HHHHHH
T ss_pred hHHHHh
Confidence 454433
No 301
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=92.71 E-value=0.85 Score=45.63 Aligned_cols=80 Identities=9% Similarity=0.020 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHH
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKK 315 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~ 315 (414)
.++.++|....-...+..|..+|.+|+.+.|++..+|..+|......|+.-+|+-.|.++|...... +.++.+|..+-.
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~~~P~~G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~Pf-~~a~~nL~~~f~ 231 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPF-PAASTNLQKALS 231 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTBSHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSBCC-HHHHHHHHHHHH
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHHhcccccHHHHHHHHHHHhcCCCC-hhHHHHHHHHHH
Confidence 4667788777777889999999999999999999999999999999999999999999999887666 567777776654
Q ss_pred H
Q 015006 316 Q 316 (414)
Q Consensus 316 ~ 316 (414)
+
T Consensus 232 ~ 232 (497)
T 1ya0_A 232 K 232 (497)
T ss_dssp H
T ss_pred H
Confidence 3
No 302
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=92.69 E-value=0.46 Score=44.36 Aligned_cols=114 Identities=16% Similarity=0.116 Sum_probs=71.4
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc-------CCHHHHHHHHHH-
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL-------GECRKSIEACNK- 260 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl-------~~~~~A~~~~~~- 260 (414)
....|-.+|..|+|.+|+..|+.+|..+.-+.-.+.++..+.+++...+..-+-.+.+.+ .+..+.++.+..
T Consensus 117 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYilal~iEl~Rr~l~~~~~kR~lELAAYF 196 (325)
T 3mv2_A 117 KMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYILGLSIELERRSLKEGNTVRMLELAAYF 196 (325)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTCHHHHHHHHHHG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHh
Confidence 345899999999999999999999987765555666666666665554432222222222 122222222111
Q ss_pred -HHHhCCCcH-HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 261 -VLDANPAHV-KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 261 -al~~dp~~~-ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
-..+.|.+- -++..-=...++.++|--|....++.|++.|..
T Consensus 197 T~c~LQp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~~ 240 (325)
T 3mv2_A 197 TKAKLSPIHRTNALQVAMSQHFKHKNFLQASYFAGEFLKIISSG 240 (325)
T ss_dssp GGSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSS
T ss_pred ccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCCH
Confidence 123344433 333333345678899999999999999999974
No 303
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=92.58 E-value=1 Score=42.07 Aligned_cols=113 Identities=14% Similarity=0.131 Sum_probs=73.0
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHc--CCH-----HHHHHHHHHH
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKL--GEC-----RKSIEACNKV 261 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl--~~~-----~~A~~~~~~a 261 (414)
....|-.+|..|+|.+|+..|+.+|..+.-+.-.+.++..+.+++...+..-+-.+.+.+ +.. +.....++-+
T Consensus 105 ~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~Rr~l~~~~~~~~kR~lELA 184 (320)
T 3mkr_B 105 RLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETERKKLPKETLEQQKRICEMA 184 (320)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchhHHHHHHHH
Confidence 446799999999999999999999998776666676666666666555433222222222 211 2222222222
Q ss_pred -----HHhCCCcHH-HHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 262 -----LDANPAHVK-GLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 262 -----l~~dp~~~k-a~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
..+.|.+-- ++..-=...++.++|--|....++.|++.|.
T Consensus 185 AYFT~c~Lqp~H~~LaLr~AM~~a~K~KNy~tAa~fArrLLel~p~ 230 (320)
T 3mkr_B 185 AYFTHSNLQPVHMILVLRTALNLFFKLKNFRTAAAFARRLLELGPK 230 (320)
T ss_dssp HHHTTSCCCHHHHHHHHHHHHHHHHHTTBHHHHHHHHHHHHHTCCC
T ss_pred HHhccCCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhcCCC
Confidence 233444433 3333334566789999999999999999886
No 304
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=92.34 E-value=0.28 Score=48.16 Aligned_cols=101 Identities=16% Similarity=0.036 Sum_probs=77.5
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC---
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN--- 265 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d--- 265 (414)
+...|.-+++.|++..|++.|.++...+... .....++++...+++..++|..+.....++..+-
T Consensus 134 ~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~------------~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~ 201 (429)
T 4b4t_R 134 WINLGEYYAQIGDKDNAEKTLGKSLSKAIST------------GAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKG 201 (429)
T ss_dssp CHHHHHHHHHHCCCTTHHHHHHHHHHHHTCC------------CSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhcCCh------------HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcC
Confidence 4567888889999999999999988865321 1246788889999999999999999999986542
Q ss_pred CC-cH--HHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 266 PA-HV--KGLYRRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 266 p~-~~--ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
++ .. +.....|.+++..++|..|...|..++.-...
T Consensus 202 ~d~~~~~~lk~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~ 240 (429)
T 4b4t_R 202 GDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTS 240 (429)
T ss_dssp CCTHHHHHHHHHHHHGGGGTSCHHHHHHHHHHHHHHSCC
T ss_pred CCHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHhccCCc
Confidence 21 12 33445677788899999999999888766443
No 305
>1zbp_A Hypothetical protein VPA1032; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.40A {Vibrio parahaemolyticus} SCOP: e.61.1.1
Probab=90.92 E-value=2.8 Score=38.14 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=52.0
Q ss_pred ccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHH
Q 015006 194 NRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKG 271 (414)
Q Consensus 194 n~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka 271 (414)
..+++.|+...|+......++ ..|.+ ..+..-+...+.-.|+|++|...++.+.+++|.....
T Consensus 5 ~~ll~~g~L~~al~~~~~~VR----~~P~d-----------a~~R~~LfqLLcv~G~w~RA~~QL~~~a~l~p~~~~~ 67 (273)
T 1zbp_A 5 KNALSEGQLQQALELLIEAIK----ASPKD-----------ASLRSSFIELLCIDGDFERADEQLMQSIKLFPEYLPG 67 (273)
T ss_dssp HHHTTTTCHHHHHHHHHHHHH----TCTTC-----------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCGGGHHH
T ss_pred HHHHhCCCHHHHHHHHHHHHH----hCCcC-----------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCchhhHH
Confidence 467899999999999999999 78888 3444445555666899999999999999999987654
No 306
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=90.13 E-value=0.25 Score=36.62 Aligned_cols=41 Identities=29% Similarity=0.296 Sum_probs=35.0
Q ss_pred Cchhh-hhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 177 LSFDG-IMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 177 ~~~~e-~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
|+..+ .+..|..+..+|...=+.|+|.+|+.+|..|+.+|.
T Consensus 1 M~~~~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 42 (83)
T 2v6y_A 1 MSAQVMLEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLS 42 (83)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 34444 677899999999999999999999999999999764
No 307
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=89.90 E-value=0.44 Score=50.15 Aligned_cols=59 Identities=24% Similarity=0.297 Sum_probs=50.2
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 261 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~a 261 (414)
-+..++..+..+|+|+.|+.+-++|+. +.|.+ ..++..||.||+++++|+.|+-..+-+
T Consensus 339 LL~~Qa~FLl~K~~~elAL~~Ak~AV~----~aPse-----------F~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 339 LLNIQTNFLLNRGDYELALGVSNTSTE----LALDS-----------FESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH----HCSSC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred HHHHHHHHHhccCcHHHHHHHHHHHHh----cCchh-----------hHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 355667777889999999999999999 67776 679999999999999999999766554
No 308
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=87.60 E-value=0.57 Score=37.09 Aligned_cols=42 Identities=21% Similarity=0.275 Sum_probs=36.0
Q ss_pred CCchh-hhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 176 GLSFD-GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 176 ~~~~~-e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
.|+.. ..+..|..+..+|...=+.|+|.+|+.+|..|+.+|.
T Consensus 7 ~m~~~~~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~ 49 (117)
T 2cpt_A 7 GMSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFL 49 (117)
T ss_dssp CSCCCCHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHH
T ss_pred cCCccHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 45555 6788899999999999999999999999999999653
No 309
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=87.42 E-value=7.6 Score=38.51 Aligned_cols=108 Identities=13% Similarity=-0.024 Sum_probs=74.1
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHH----------HHHh-------------------hhhhHHHH
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEG----------KVFV-------------------GKRNLLHL 239 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~----------~~~~-------------------~~~~~~~~ 239 (414)
+...+..+...|+...|...|.+|+.. |.+..-. ..+. .....++.
T Consensus 216 W~~ya~~~~~~~~~~~ar~i~erAi~~-----P~~~~l~~~y~~~~e~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~lw~ 290 (493)
T 2uy1_A 216 YFFYSEYLIGIGQKEKAKKVVERGIEM-----SDGMFLSLYYGLVMDEEAVYGDLKRKYSMGEAESAEKVFSKELDLLRI 290 (493)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH-----CCSSHHHHHHHHHTTCTHHHHHHHHHTC----------CHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhC-----CCcHHHHHHHHhhcchhHHHHHHHHHHHhhccchhhhhcccccHHHHH
Confidence 455566666788999999999999984 4432110 0000 01124566
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcC-CHHHHHHHHHHHHhhCCCC
Q 015006 240 NVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALG-EFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 240 N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~-~~~eA~~~~~~al~l~P~n 302 (414)
+.+....+.+..+.|...+.+| ...+.....+...|..-..++ +.+.|...|+.+++..|++
T Consensus 291 ~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~~~~ 353 (493)
T 2uy1_A 291 NHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKHPDS 353 (493)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHCTTC
T ss_pred HHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHCCCC
Confidence 6666666778899999999999 433335556666666666566 5999999999999999986
No 310
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=86.82 E-value=6.5 Score=39.00 Aligned_cols=54 Identities=7% Similarity=-0.005 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHH
Q 015006 203 ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGL 272 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~ 272 (414)
..+...|.+|+.. .|.. ..++.+.|..+...++.+.|...+.+|+.. |.+..-+
T Consensus 196 ~Rv~~~ye~al~~----~p~~-----------~~lW~~ya~~~~~~~~~~~ar~i~erAi~~-P~~~~l~ 249 (493)
T 2uy1_A 196 SRMHFIHNYILDS----FYYA-----------EEVYFFYSEYLIGIGQKEKAKKVVERGIEM-SDGMFLS 249 (493)
T ss_dssp HHHHHHHHHHHHH----TTTC-----------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-CCSSHHH
T ss_pred HHHHHHHHHHHHc----CCCC-----------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC-CCcHHHH
Confidence 3455667777763 2333 568888999999999999999999999999 9875433
No 311
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=86.78 E-value=6.8 Score=38.98 Aligned_cols=96 Identities=9% Similarity=0.027 Sum_probs=68.5
Q ss_pred hhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHH
Q 015006 192 TGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN-PAHVK 270 (414)
Q Consensus 192 ~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d-p~~~k 270 (414)
.-+.+.+.|++++|...|.+.... .+.|+ ...|+.+-.+|.+.|++++|...+....+.. ..+..
T Consensus 111 lI~~~~~~g~~~~A~~l~~~M~~~--g~~Pd------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~~ 176 (501)
T 4g26_A 111 GARLAVAKDDPEMAFDMVKQMKAF--GIQPR------------LRSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEEP 176 (501)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHT--TCCCC------------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHc--CCCCc------------cceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCHH
Confidence 334566778888888888776651 12222 4567777778888888888888888876543 23567
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCC
Q 015006 271 GLYRRGMAYMALGEFEEAQRDFEMMMKV--DKS 301 (414)
Q Consensus 271 a~~r~g~a~~~l~~~~eA~~~~~~al~l--~P~ 301 (414)
.|..+-.++.+.|++++|.+.|++.-+. .|+
T Consensus 177 ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps 209 (501)
T 4g26_A 177 ELAALLKVSMDTKNADKVYKTLQRLRDLVRQVS 209 (501)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBC
T ss_pred HHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcC
Confidence 7778888888888888888888877653 555
No 312
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=85.34 E-value=0.6 Score=34.50 Aligned_cols=38 Identities=24% Similarity=0.242 Sum_probs=33.9
Q ss_pred hhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 180 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 180 ~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
...+..|..+..+|...=+.|+|.+|+.+|..|+.+|.
T Consensus 13 ~~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~ 50 (83)
T 2w2u_A 13 VMLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLA 50 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 45667899999999999999999999999999999764
No 313
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=84.59 E-value=7.1 Score=38.23 Aligned_cols=105 Identities=13% Similarity=0.088 Sum_probs=75.9
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH-
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD- 263 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~- 263 (414)
.|.-....++.++..|+|.+|.........-.... .+ ...+..+++-....|+..++|.+|....+++..
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~--~~-------~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~ 206 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGS--ME-------MSEKIQFILEQMELSILKGDYSQATVLSRKILKK 206 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSS--SC-------HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhc--cc-------HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 45555667788889999999999988876532211 11 223456777788889999999999999998732
Q ss_pred --hCCC--cHHH--HHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 264 --ANPA--HVKG--LYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 264 --~dp~--~~ka--~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
-.+. ..++ +.-.|..+...++|.+|..+|..++..
T Consensus 207 ~~~~~~~~~lk~~~~~~~~~~~~~e~~y~~a~~~y~e~~~~ 247 (445)
T 4b4t_P 207 TFKNPKYESLKLEYYNLLVKISLHKREYLEVAQYLQEIYQT 247 (445)
T ss_dssp HHHSSCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 2222 2344 445688888899999999999988865
No 314
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=83.90 E-value=9.8 Score=37.83 Aligned_cols=92 Identities=9% Similarity=0.061 Sum_probs=72.4
Q ss_pred ccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHH
Q 015006 196 LFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN-PAHVKGLYR 274 (414)
Q Consensus 196 ~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d-p~~~ka~~r 274 (414)
..+.+....|...|.+.... .+.|+ ...|+.+-.+|.+.|++++|+..+....... ..+...|--
T Consensus 80 ~~~~~~l~~A~~lf~~M~~~--G~~Pd------------~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~ 145 (501)
T 4g26_A 80 SSPNPGLSRGFDIFKQMIVD--KVVPN------------EATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGP 145 (501)
T ss_dssp SSCCHHHHHHHHHHHHHHHT--TCCCC------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred hhhcchHHHHHHHHHHHHHh--CCCCC------------HHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehH
Confidence 34566788888888876651 12332 5678889999999999999999999887643 236788888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHhh--CCC
Q 015006 275 RGMAYMALGEFEEAQRDFEMMMKV--DKS 301 (414)
Q Consensus 275 ~g~a~~~l~~~~eA~~~~~~al~l--~P~ 301 (414)
+=.+|...|++++|.+.|....+. .|+
T Consensus 146 lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd 174 (501)
T 4g26_A 146 ALFGFCRKGDADKAYEVDAHMVESEVVPE 174 (501)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHCCCHHHHHHHHHHHHhcCCCCC
Confidence 889999999999999999998765 565
No 315
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=83.69 E-value=0.75 Score=34.07 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=34.8
Q ss_pred CchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 177 LSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 177 ~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
|+....+..|..+..+|...=+.|+|.+|+.+|..|+.+|.
T Consensus 4 m~~~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~ 44 (85)
T 2v6x_A 4 MSTGDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLM 44 (85)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 44455677888999999999999999999999999999654
No 316
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=83.68 E-value=0.77 Score=44.47 Aligned_cols=41 Identities=20% Similarity=0.068 Sum_probs=31.4
Q ss_pred ccccCCcCcEEEEEEcCCCcCCCCCCCCCCCCCeeeEEEEeeEEE
Q 015006 2 GIGTMTREEKAVIYVTSQYLTPSPLMPVVEGCEEVHFEVELVHLI 46 (414)
Q Consensus 2 ~~~~m~~Ge~~~~~i~~~~~~g~~~~~~ip~~~~l~~~vel~~~~ 46 (414)
||.+|++||+..|.|+.--.||... .+|.+++|+|+|.++.
T Consensus 204 ~L~Gmk~Ge~~~v~v~fp~dy~~~~----laGk~~~F~V~v~~i~ 244 (392)
T 1t11_A 204 GIVGKTKGMEFVIDVTFPEDYHAEN----LKGKAAKFAIKVNKVE 244 (392)
T ss_dssp GTTTCCSSCCCCEEEECCTTCSCTT----TSSCEEEECCCEEEEE
T ss_pred HhCCCCCCCEEEEEEeCccccccCC----CCCCeEEEEEEEEEEE
Confidence 6899999999999996323455422 3578999999998864
No 317
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=82.58 E-value=1.4 Score=33.20 Aligned_cols=39 Identities=15% Similarity=0.117 Sum_probs=33.3
Q ss_pred hhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhccc
Q 015006 180 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH 218 (414)
Q Consensus 180 ~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~ 218 (414)
...+..|..+..+|...=+.|+|.+|+.+|..|+.+|..
T Consensus 9 ~~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~ 47 (93)
T 1wfd_A 9 DSDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQ 47 (93)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 345667888899999999999999999999999997643
No 318
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=82.26 E-value=2.8 Score=35.65 Aligned_cols=81 Identities=12% Similarity=-0.013 Sum_probs=44.7
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..++..|......|++.-|.++|.++-.+ ..+...|.-.|+-+.-....+.+..-.
T Consensus 35 ~~Wk~Lg~~AL~~gn~~lAe~cy~~~~D~-----------------------~~L~~Ly~~tg~~e~L~kla~iA~~~g- 90 (177)
T 3mkq_B 35 ITWERLIQEALAQGNASLAEMIYQTQHSF-----------------------DKLSFLYLVTGDVNKLSKMQNIAQTRE- 90 (177)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHTTCH-----------------------HHHHHHHHHHTCHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHhCCH-----------------------HHHHHHHHHhCCHHHHHHHHHHHHHCc-
Confidence 35777777777777777777777765441 112233333444444333333332221
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMM 295 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~a 295 (414)
+ +.....+++.+|+++++++.|.+.
T Consensus 91 ~----~n~af~~~l~lGdv~~~i~lL~~~ 115 (177)
T 3mkq_B 91 D----FGSMLLNTFYNNSTKERSSIFAEG 115 (177)
T ss_dssp C----HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred c----HHHHHHHHHHcCCHHHHHHHHHHC
Confidence 1 122245677778888887777543
No 319
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=79.06 E-value=2.1 Score=31.68 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=28.6
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
.|..+..+|..+-+.|+|.+|+.+|..|+.+|-
T Consensus 15 ~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll 47 (86)
T 4a5x_A 15 AAATVLKRAVELDSESRYPQALVCYQEGIDLLL 47 (86)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 567777888888899999999999999998764
No 320
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=78.48 E-value=6.9 Score=40.66 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=33.7
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHH--------HhCCCcHHHHHHHHHHHHHcCCHHHHHHH
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVL--------DANPAHVKGLYRRGMAYMALGEFEEAQRD 291 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al--------~~dp~~~ka~~r~g~a~~~l~~~~eA~~~ 291 (414)
..+.++|..+++.++++.|+.+|.++= .....+.+.+-+++......|++..|...
T Consensus 682 ~~W~~la~~al~~~~~~~A~~~y~~~~d~~~l~~l~~~~~~~~~~~~~~~~a~~~~~~~~A~~~ 745 (814)
T 3mkq_A 682 MKWRALGDASLQRFNFKLAIEAFTNAHDLESLFLLHSSFNNKEGLVTLAKDAETTGKFNLAFNA 745 (814)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHTCHHHHHHHHHHTTCHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHccChhhhHHHHHHcCCHHHHHHHHHHHHHcCchHHHHHH
Confidence 467778888888888888888777651 11134445555555555555555555433
No 321
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=78.19 E-value=5 Score=34.05 Aligned_cols=46 Identities=15% Similarity=0.143 Sum_probs=41.4
Q ss_pred HHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 246 LKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 296 (414)
Q Consensus 246 ~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al 296 (414)
+.+|+++.|.+.|... ++...|.++|.+.+..|+++-|..+|.++-
T Consensus 16 L~lg~l~~A~e~a~~l-----~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~~ 61 (177)
T 3mkq_B 16 LEYGNLDAALDEAKKL-----NDSITWERLIQEALAQGNASLAEMIYQTQH 61 (177)
T ss_dssp HHTTCHHHHHHHHHHH-----CCHHHHHHHHHHHHHTTCHHHHHHHHHHTT
T ss_pred HhcCCHHHHHHHHHHh-----CCHHHHHHHHHHHHHcCChHHHHHHHHHhC
Confidence 6789999999998876 778899999999999999999999998763
No 322
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.10 E-value=3 Score=46.15 Aligned_cols=104 Identities=11% Similarity=-0.045 Sum_probs=72.7
Q ss_pred HhhhccccccccHHHHHHHHHHHHhhcccCCCCCh--HHHHH------HhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 190 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDD--EEGKV------FVGKRNLLHLNVAACLLKLGECRKSIEACNKV 261 (414)
Q Consensus 190 k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~--~e~~~------~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~a 261 (414)
.-.|..++..|++++|..+|.+|..-+........ ..... ........|+..+..+-+.+.++.+++.+..|
T Consensus 846 yl~g~~~L~~ge~~~A~~~F~kaa~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~~~~~vi~fa~lA 925 (1139)
T 4fhn_B 846 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 925 (1139)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHhhhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 45688888999999999999998653321111110 01000 11223456777788888899999999999999
Q ss_pred HHhCCCcH---H--HHHHHHHHHHHcCCHHHHHHHHH
Q 015006 262 LDANPAHV---K--GLYRRGMAYMALGEFEEAQRDFE 293 (414)
Q Consensus 262 l~~dp~~~---k--a~~r~g~a~~~l~~~~eA~~~~~ 293 (414)
|+..+... . -|.+.=+++..+++|++|...+.
T Consensus 926 i~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~ 962 (1139)
T 4fhn_B 926 DASKETDDEDLSIAITHETLKTACAAGKFDAAHVALM 962 (1139)
T ss_dssp HHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHH
T ss_pred HHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 98764332 2 47788899999999999987764
No 323
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=77.05 E-value=3.8 Score=42.64 Aligned_cols=19 Identities=21% Similarity=0.218 Sum_probs=12.5
Q ss_pred HHHHHcCCHHHHHHHHHHH
Q 015006 277 MAYMALGEFEEAQRDFEMM 295 (414)
Q Consensus 277 ~a~~~l~~~~eA~~~~~~a 295 (414)
.+++.+|++++|++.|.+.
T Consensus 744 ~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 744 NAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHc
Confidence 4566677777777766543
No 324
>3txn_A 26S proteasome regulatory complex subunit P42B; PCI domain, alpha solenoid, regulatory PART LID, hydrolase, protein binding; 2.50A {Drosophila melanogaster} PDB: 3txm_A
Probab=76.35 E-value=55 Score=31.31 Aligned_cols=132 Identities=13% Similarity=0.066 Sum_probs=85.4
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhc-------------------ccCCCCChHH-HHHH------------hhh
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDF-------------------NHVNPQDDEE-GKVF------------VGK 233 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~-------------------~~~~p~~~~e-~~~~------------~~~ 233 (414)
=....+.|..+.+.|++.+-..+......++ ..+ |.+.+. ...+ .-+
T Consensus 19 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~kak~~k~v~~l~~~~~~~-~~~~~~~~~~~~~~~~~a~~~~r~fl 97 (394)
T 3txn_A 19 EQGILQQGELYKQEGKAKELADLIKVTRPFLSSISKAKAAKLVRSLVDMFLDM-DAGTGIEVQLCKDCIEWAKQEKRTFL 97 (394)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHTTTGGGGSCHHHHHHHHHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455677778888888777776665543332 222 332211 1111 112
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CC--CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC---CCCHH
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLDA----NP--AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD---KSSEP 304 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~----dp--~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~---P~n~~ 304 (414)
+..+-.++|..|+..|+|.+|+..+.+.++. |. .-...+....+.|..++++..|...|.+|.... +.+ +
T Consensus 98 r~~l~~kL~~l~~~~~~y~~a~~~i~~l~~~~~~~dd~~~llev~lle~~~~~~~~n~~k~k~~l~~a~~~~~ai~~~-p 176 (394)
T 3txn_A 98 RQSLEARLIALYFDTALYTEALALGAQLLRELKKLDDKNLLVEVQLLESKTYHALSNLPKARAALTSARTTANAIYCP-P 176 (394)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTSSCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCC-H
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhccCCCC-H
Confidence 3335558999999999999999999888763 21 125567778899999999999999999998763 122 4
Q ss_pred HHHHHHHHHHHHHHH
Q 015006 305 DATAALSKLKKQRQE 319 (414)
Q Consensus 305 ~~~~~l~~~~~~~~~ 319 (414)
.+...+..+...+.-
T Consensus 177 ~i~a~i~~~~Gi~~l 191 (394)
T 3txn_A 177 KVQGALDLQSGILHA 191 (394)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhHHHH
Confidence 566666665554443
No 325
>1ya0_A SMG-7 transcript variant 2; alpha-helical repeat, tetratricopetide repeat (TPR), 14-3-3, signaling protein; 2.55A {Homo sapiens} SCOP: a.118.8.1
Probab=75.91 E-value=8.3 Score=38.40 Aligned_cols=80 Identities=10% Similarity=-0.002 Sum_probs=67.4
Q ss_pred HHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC
Q 015006 187 EKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANP 266 (414)
Q Consensus 187 ~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp 266 (414)
..+...|....-+..+..|...|.+|+. +.|.+ ...|+-+|..+.-.+++-+|+-+|.++|....
T Consensus 153 r~l~~LGDL~RY~~~~~~A~~~Y~~A~~----~~P~~-----------G~~~nqLavla~~~~~~l~a~y~y~rsl~~~~ 217 (497)
T 1ya0_A 153 HCLVHLGDIARYRNQTSQAESYYRHAAQ----LVPSN-----------GQPYNQLAILASSKGDHLTTIFYYCRSIAVKF 217 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH----HCTTB-----------SHHHHHHHHHHHHTTCHHHHHHHHHHHHSSSB
T ss_pred HHHHHcccHHHHHHHHHHHHHHHHHHHH----hCCCC-----------CchHHHHHHHHhcccccHHHHHHHHHHHhcCC
Confidence 3456677777667788999999999999 67776 67899999999999999999999999998887
Q ss_pred CcHHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMA 281 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~ 281 (414)
..+.|.-++...+..
T Consensus 218 Pf~~a~~nL~~~f~~ 232 (497)
T 1ya0_A 218 PFPAASTNLQKALSK 232 (497)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CChhHHHHHHHHHHH
Confidence 788888888777764
No 326
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=75.57 E-value=4.3 Score=30.24 Aligned_cols=28 Identities=25% Similarity=0.255 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMM 296 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al 296 (414)
+..+-|+|.+++..|+|++|+++.++|.
T Consensus 15 AH~~~RrAe~ll~~gkydeAIech~kAa 42 (97)
T 2crb_A 15 AHQQSRRADRLLAAGKYEEAISCHRKAT 42 (97)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhHhhhHHHHHHhcCCHHHHHHHHHHHH
Confidence 4456677777777777777776655544
No 327
>1qsa_A Protein (soluble lytic transglycosylase SLT70); alpha-superhelix, transferase; HET: GOL; 1.65A {Escherichia coli} SCOP: a.118.5.1 d.2.1.6 PDB: 1qte_A* 1sly_A*
Probab=75.36 E-value=15 Score=37.52 Aligned_cols=54 Identities=15% Similarity=0.080 Sum_probs=44.6
Q ss_pred HHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 015006 244 CLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 244 ~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~ 297 (414)
..++.++|..|..++...-.-.....++.|.+|.++..+|+-++|...|.++..
T Consensus 294 ~Alr~~d~~~a~~~~~~l~~~~~~~~r~~YW~~ra~~~~g~~~~a~~~~~~~a~ 347 (618)
T 1qsa_A 294 MALGTGDRRGLNTWLARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQ 347 (618)
T ss_dssp HHHHHTCHHHHHHHHHHSCTTGGGSHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHCCCHHHHHHHHHHccccccccHhHHHHHHHHHHHcCCHHHHHHHHHHHhc
Confidence 345779999999999765443335688999999999999999999999988765
No 328
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=75.18 E-value=5.3 Score=39.86 Aligned_cols=68 Identities=9% Similarity=0.059 Sum_probs=55.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC--Cc---HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDANP--AH---VKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp--~~---~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
+++++-+-..|+..+.|..|.....++.-... .| +.-+|..|+.+.-.++|.+|.+.|..|+...|.+
T Consensus 231 a~l~nllLRnYL~~~~y~qA~~lvsk~~fP~~~~sn~q~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~ 303 (523)
T 4b4t_S 231 AMLINLILRDFLNNGEVDSASDFISKLEYPHTDVSSSLEARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHN 303 (523)
T ss_dssp HHHHHHHHHHHHHSSCSTTHHHHHHHHCSCTTTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCS
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHhcCcCCcccCCHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcc
Confidence 55677777889999999999999999842221 12 5667788999999999999999999999988754
No 329
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=74.34 E-value=25 Score=33.54 Aligned_cols=72 Identities=13% Similarity=0.033 Sum_probs=53.6
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCC----------Cc------------HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 241 VAACLLKLGECRKSIEACNKVLDANP----------AH------------VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 241 ~a~~~~kl~~~~~A~~~~~~al~~dp----------~~------------~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
.|......++...|+..+.+||.+-. .+ ..++..++.++..+|++.+|+..+..++..
T Consensus 121 ~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~a~~~l~~~~~~ 200 (388)
T 2ff4_A 121 AGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASAVIAELEALTFE 200 (388)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 34444556888889999999887641 11 355666788899999999999999999999
Q ss_pred CCCCHHHHHHHHHHH
Q 015006 299 DKSSEPDATAALSKL 313 (414)
Q Consensus 299 ~P~n~~~~~~~l~~~ 313 (414)
+|-++ .+...|-.+
T Consensus 201 ~P~~E-~~~~~lm~a 214 (388)
T 2ff4_A 201 HPYRE-PLWTQLITA 214 (388)
T ss_dssp STTCH-HHHHHHHHH
T ss_pred CCCCH-HHHHHHHHH
Confidence 99884 455554443
No 330
>3t5v_B Nuclear mRNA export protein THP1; PCI, mRNA nuclear export, mRNA, nuclear, transcription; 2.90A {Saccharomyces cerevisiae}
Probab=74.31 E-value=7.6 Score=38.17 Aligned_cols=105 Identities=6% Similarity=0.005 Sum_probs=69.2
Q ss_pred ccccHHHHHHHHHHHHhhcccCCCCChHHH-HHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--------C--
Q 015006 198 KEGKFELAKAKYEKVLRDFNHVNPQDDEEG-KVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN--------P-- 266 (414)
Q Consensus 198 k~g~y~~A~~~Y~~al~~~~~~~p~~~~e~-~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d--------p-- 266 (414)
+....+.|.....++...+......+.++. ..-+.....+.+++..+|+++++...|...+..+-... |
T Consensus 138 ~~~~le~~a~~i~k~F~~cl~Dr~~~~~~s~p~kk~~~l~l~n~L~kiYFkl~~~~lckni~k~i~~~~~~p~~~~~p~~ 217 (455)
T 3t5v_B 138 SHQFLSHISSILSRLFNSIKPPRGNASSTNIPGKQRILLYLVNKLNNIYFRIESPQLCSNIFKNFQPKSMLAHFNEYQLD 217 (455)
T ss_dssp TTHHHHHHHHHHHHHHHHCCCC----CCSSCCHHHHHHHHHHHHHHHHHHHSSCCTTHHHHHHTHHHHCCCSCGGGSCHH
T ss_pred chhHHHHHHHHHHHHHHHhcccCCCcccccccccchhHHHHHHHHHHHHHHcCCHHHHHHHHHHhccCCCCcChhhCCcc
Confidence 345677788888887776543221111110 00122223456778899999999998887775432222 1
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh-CCCC
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV-DKSS 302 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l-~P~n 302 (414)
.-+.-+|..|+.++..++|.+|.+.|..|++. .|.+
T Consensus 218 q~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~lcp~~ 254 (455)
T 3t5v_B 218 QQIEYRYLLGRYYLLNSQVHNAFVQFNEAFQSLLNLP 254 (455)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHCC
T ss_pred ceEeeeHHHHHHHHHHccHHHHHHHHHHHHHhcCCcc
Confidence 22567899999999999999999999999998 6653
No 331
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=71.41 E-value=22 Score=28.97 Aligned_cols=63 Identities=22% Similarity=0.134 Sum_probs=44.0
Q ss_pred HHHHHHHHHHH-cCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 237 LHLNVAACLLK-LGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 237 ~~~N~a~~~~k-l~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
=|.++|.-++- .+.-++--......+.-.+-++..++.+|.||.++|+..+|-+.+.+|.+.-
T Consensus 92 e~vd~ALd~lv~~~KkDqLdki~~~~l~n~~~~~~~l~kia~Ay~Klg~~r~a~eLl~~AC~kG 155 (172)
T 1wy6_A 92 EHVNKALDILVIQGKRDKLEEIGREILKNNEVSASILVAIANALRRVGDERDATTLLIEACKKG 155 (172)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHC--CCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhccHhHHHHHHHHHhccCCCChHHHHHHHHHHHHhcchhhHHHHHHHHHHhh
Confidence 35667766553 3444443333344345566679999999999999999999999999998753
No 332
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=69.73 E-value=15 Score=36.17 Aligned_cols=44 Identities=18% Similarity=0.216 Sum_probs=25.1
Q ss_pred hhhhhHHHHHHHhhhcc--cccccc-HHHHHHHHHHHHhhcccCCCC
Q 015006 179 FDGIMDEAEKIRVTGNR--LFKEGK-FELAKAKYEKVLRDFNHVNPQ 222 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~--~fk~g~-y~~A~~~Y~~al~~~~~~~p~ 222 (414)
..++...|+.++.++.. --+.-+ -..|+.+|++|+.++..+...
T Consensus 422 L~eKi~~AE~~~~k~e~~~n~~a~~yA~kAi~~Y~~Ai~~L~k~~~t 468 (526)
T 2wb7_A 422 LQEKIDEAEQLLAKAKGMNNENAIEYAQGAIDEYKAAINDLQKAAQQ 468 (526)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhhccCCHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 44555566666665522 222222 345888888888877665533
No 333
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=67.98 E-value=3.9 Score=30.47 Aligned_cols=35 Identities=23% Similarity=0.283 Sum_probs=30.4
Q ss_pred hHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 183 MDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 183 ~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
+..|..+-.++..+.+.|+|++||.+..+|..++.
T Consensus 12 Ln~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~ 46 (97)
T 2crb_A 12 LNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLS 46 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 45688888899999999999999999999998653
No 334
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=66.14 E-value=12 Score=27.58 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=28.5
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHh
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 214 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~ 214 (414)
..+..+...|..+|+.++|.+|...|.++..
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n 81 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALN 81 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHc
Confidence 4688888999999999999999999999987
No 335
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=65.63 E-value=37 Score=24.83 Aligned_cols=27 Identities=7% Similarity=0.192 Sum_probs=17.3
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 272 LYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 272 ~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
+..+|.-.-..|+|++|+..|..|++.
T Consensus 19 lv~~Ave~D~~g~y~eAl~lY~~Aie~ 45 (86)
T 4a5x_A 19 VLKRAVELDSESRYPQALVCYQEGIDL 45 (86)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 344555556677777777777666653
No 336
>2o8p_A 14-3-3 domain containing protein; signaling protein, 14-3-3, cell regulator protein, cryptospo parvum, structural genomics; HET: MSE; 1.82A {Cryptosporidium parvum} SCOP: a.118.7.1
Probab=64.49 E-value=24 Score=31.07 Aligned_cols=59 Identities=17% Similarity=0.046 Sum_probs=46.1
Q ss_pred cccccHHHHHHHHHHHHhhccc-CCCCChHHHHHHhhhhhHHHHHHHHHHH-HcCCHHHHHHHHHHHHH
Q 015006 197 FKEGKFELAKAKYEKVLRDFNH-VNPQDDEEGKVFVGKRNLLHLNVAACLL-KLGECRKSIEACNKVLD 263 (414)
Q Consensus 197 fk~g~y~~A~~~Y~~al~~~~~-~~p~~~~e~~~~~~~~~~~~~N~a~~~~-kl~~~~~A~~~~~~al~ 263 (414)
|..|+-+.|...|+.|..+... +.|. ++++..+.+|.+..|+ -+++.++|+..+.+|+.
T Consensus 136 ~~~g~~e~a~~aY~~A~~iA~~~L~pt--------hPirLGLaLNfSVFyYEIln~p~~Ac~lAk~Afd 196 (227)
T 2o8p_A 136 FGLCSLEDSKKIHQDAFTLLCEHPDKI--------EQLPLGFIQNLAYILSEKYGEKKQVFNMLNSLGK 196 (227)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHCGGGG--------GGSCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHH
T ss_pred HccccHHHHHHHHHHHHHHHHhhCCCC--------ChHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3566688899999999986543 3332 5677889999998888 46889999999999865
No 337
>3kae_A CDC27, possible protein of nuclear scaffold; tetratricopeptide repeat protein, protein binding; 2.30A {Encephalitozoon cuniculi}
Probab=62.98 E-value=29 Score=29.32 Aligned_cols=51 Identities=16% Similarity=0.335 Sum_probs=44.3
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 241 VAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 296 (414)
Q Consensus 241 ~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al 296 (414)
++...+-.|.|.+|+-..... +.+-+.|..+.|+..+.+|..|+..+++.|
T Consensus 39 ~~I~LyyngEY~R~Lf~L~~l-----NT~Ts~YYk~LCy~klKdYkkA~~~le~il 89 (242)
T 3kae_A 39 MSIVLYLNGEYTRALFHLHKL-----NTCTSKYYESLCYKKKKDYKKAIKSLESIL 89 (242)
T ss_dssp HHHHHHHTTCHHHHHHHHHTC-----CBHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred hhhhhhhcchHhHHHHHHHhc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566677789999988766543 778999999999999999999999999999
No 338
>2npm_A 14-3-3 domain containing protein; cell regulator protein 14-3-3, struc genomics, structural genomics consortium, SGC, protein BIND; HET: SEP; 2.52A {Cryptosporidium parvum}
Probab=60.80 E-value=23 Score=31.84 Aligned_cols=53 Identities=23% Similarity=0.254 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHHH
Q 015006 203 ELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVLD 263 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-l~~~~~A~~~~~~al~ 263 (414)
+.|...|+.|+.+...+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+.
T Consensus 173 e~a~~aY~~A~~iA~~L~pth--------PirLGLaLNfSVFyYEiln~~~~Ac~lAk~Afd 226 (260)
T 2npm_A 173 EDALKAYKDATVVAKDLEPTH--------PIRLGLALNFSVFHYEILNEPRAAIDMAKEAFE 226 (260)
T ss_dssp HHHHHHHHHHHHHHTTSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467888999998773355554 5667888999988886 7899999998888753
No 339
>2br9_A 14-3-3E, 14-3-3 protein epsilon; cell regulator protein, 14-3-3, phosphoserine, structural GE consortium, SGC, ywhae; HET: SEP; 1.75A {Homo sapiens} PDB: 3ual_A* 2o98_A* 3m50_A* 3m51_A* 3axy_C*
Probab=58.88 E-value=18 Score=31.99 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhcc-cCCCCChHHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 015006 203 ELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 262 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~-~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-l~~~~~A~~~~~~al 262 (414)
+.|...|+.|+.+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 147 e~a~~aY~~A~~iA~~~L~pth--------PirLgLaLN~SVF~yEil~~~~~A~~lAk~af 200 (234)
T 2br9_A 147 ENSLVAYKAASDIAMTELPPTH--------PIRLGLALNFSVFYYEILNSPDRACRLAKAAF 200 (234)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 467888999998664 355554 5667788899888886 789999998888775
No 340
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.19 E-value=17 Score=28.34 Aligned_cols=43 Identities=14% Similarity=0.143 Sum_probs=28.6
Q ss_pred CHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 015006 250 ECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDK 300 (414)
Q Consensus 250 ~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P 300 (414)
.|++|..+.++||.+|-. |+-...+.-|.+.+..|+++|.+..
T Consensus 18 ~h~~AF~~Is~AL~~DE~--------g~k~~Al~lYk~GI~eLe~Gl~I~~ 60 (116)
T 2dl1_A 18 AYKKAFLFVNKGLNTDEL--------GQKEEAKNYYKQGIGHLLRGISISS 60 (116)
T ss_dssp HHHHHHHHHHHHHHHHHH--------TCHHHHHHHHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhhhhhc--------CCHHHHHHHHHHHHHHHHHhccccc
Confidence 367888888888888752 3334444455556677777777755
No 341
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=56.09 E-value=61 Score=35.35 Aligned_cols=99 Identities=10% Similarity=-0.070 Sum_probs=74.1
Q ss_pred HHHhhhccccccccHHHHHHHHHHHHhhc-ccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-
Q 015006 188 KIRVTGNRLFKEGKFELAKAKYEKVLRDF-NHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDAN- 265 (414)
Q Consensus 188 ~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~-~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~d- 265 (414)
.+...=+.+.+.|+.++|...|....... ..+.|+ ...|+-+-..|.+.|++++|+..+.+..+..
T Consensus 129 TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~Pd------------vvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~ 196 (1134)
T 3spa_A 129 RLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLT------------LDMYNAVMLGWARQGAFKELVYVLFMVKDAGL 196 (1134)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCC------------HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCC------------HhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCC
Confidence 45555667889999999999997644311 112222 5688889999999999999999999876543
Q ss_pred CCcHHHHHHHHHHHHHcCC-HHHHHHHHHHHHhh
Q 015006 266 PAHVKGLYRRGMAYMALGE-FEEAQRDFEMMMKV 298 (414)
Q Consensus 266 p~~~ka~~r~g~a~~~l~~-~~eA~~~~~~al~l 298 (414)
..|+-.|--+=.++.+.|+ .++|.+.|+.....
T Consensus 197 ~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~k 230 (1134)
T 3spa_A 197 TPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQE 230 (1134)
T ss_dssp CCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHc
Confidence 2367777777778899888 57888888888765
No 342
>3uzd_A 14-3-3 protein gamma; structural genomics, SGC, structural genomics consortium, MA alpha, phosphoserine, phosphothreonine; HET: SEP; 1.86A {Homo sapiens} PDB: 4e2e_A 2b05_A* 2c63_A* 2c74_A* 4dnk_A 4gnt_A 2bq0_A 2c23_A 2c1n_A* 2c1j_A* 2btp_A*
Probab=55.47 E-value=23 Score=31.66 Aligned_cols=53 Identities=15% Similarity=0.170 Sum_probs=38.8
Q ss_pred HHHHHHHHHHHHhhcc-cCCCCChHHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 015006 202 FELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 262 (414)
Q Consensus 202 y~~A~~~Y~~al~~~~-~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-l~~~~~A~~~~~~al 262 (414)
-..|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 147 ~~~a~~aY~~A~~iA~~~L~pth--------PirLGLaLNfSVFyYEIln~~~~Ac~lAk~Af 201 (248)
T 3uzd_A 147 VESSEKAYSEAHEISKEHMQPTH--------PIRLGLALNYSVFYYEIQNAPEQACHLAKTAF 201 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 3567888999988654 355554 5667788898888776 688888888777764
No 343
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=55.07 E-value=13 Score=39.55 Aligned_cols=64 Identities=20% Similarity=0.212 Sum_probs=45.6
Q ss_pred CCCCeEEEEEEEEeecCCCceEeeeccC------------------------CCCCceEEEcCCCCchHHHHHHhhhcCC
Q 015006 75 LHDSLLCVHYKGMLLNEEKKVFYDTRVD------------------------NDGQPLEFSSGEGLVPEGFEMCVRLMLP 130 (414)
Q Consensus 75 ~~~~~v~v~y~g~~~~~~g~~~~~s~~~------------------------~~~~p~~f~lG~~~v~~gle~~l~~M~~ 130 (414)
..|+.|.|.|+..|..+++..-++.+.+ +....++|.+|.|.+.+-++.+|..|..
T Consensus 562 ~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~qms~ 641 (950)
T 3htx_A 562 TNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQMTV 641 (950)
T ss_dssp CTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTTCCT
T ss_pred CCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeeeccc
Confidence 4899999999999875432221111100 0123579999999999999999999999
Q ss_pred CCeEEEEe
Q 015006 131 GEIALVTC 138 (414)
Q Consensus 131 GE~~~v~i 138 (414)
|+...|..
T Consensus 642 gqT~~F~~ 649 (950)
T 3htx_A 642 GEYASFKM 649 (950)
T ss_dssp TCEEEEEE
T ss_pred cceeEEec
Confidence 99999884
No 344
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.67 E-value=23 Score=27.65 Aligned_cols=73 Identities=12% Similarity=0.028 Sum_probs=49.2
Q ss_pred hhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhccc---CCC----CChHHHHHHhhhhhHHHHHHHHHHHHcCCHHH
Q 015006 181 GIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNH---VNP----QDDEEGKVFVGKRNLLHLNVAACLLKLGECRK 253 (414)
Q Consensus 181 e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~---~~p----~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~ 253 (414)
...++|-.+.+.|-..=..|+-..|+.+|+++|..|.. +.. ...+.+...+.+......|+..+.-+++....
T Consensus 17 ~~h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le~ 96 (116)
T 2dl1_A 17 EAYKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILEK 96 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44456666777777666778999999999998876642 222 22455666667777777888887777654433
No 345
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=54.29 E-value=36 Score=24.13 Aligned_cols=29 Identities=17% Similarity=0.307 Sum_probs=25.1
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCCC
Q 015006 274 RRGMAYMALGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 274 r~g~a~~~l~~~~eA~~~~~~al~l~P~n 302 (414)
.+|..+...|++++|...|-+|+.+.|.-
T Consensus 22 ~~GE~L~~~g~~~~~~~hf~nAl~Vc~qP 50 (73)
T 3ax2_A 22 QLGEELLAQGDYEKGVDHLTNAIAVCGQP 50 (73)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTCSSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCCH
Confidence 46888889999999999999999998874
No 346
>1o9d_A 14-3-3-like protein C; protein-binding, fusicoccin, 14-3-3 family, activating drug; HET: TPO; 2.3A {Nicotiana tabacum} SCOP: a.118.7.1 PDB: 1o9c_A* 1o9e_A* 1o9f_A* 3e6y_A*
Probab=54.20 E-value=24 Score=31.76 Aligned_cols=52 Identities=15% Similarity=0.169 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHhhcc-cCCCCChHHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 015006 203 ELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 262 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~-~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-l~~~~~A~~~~~~al 262 (414)
+.|...|+.|+.+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 152 e~a~~aY~~A~~iA~~~L~pth--------PirLGLaLNfSVFyYEiln~~~~Ac~lAk~Af 205 (260)
T 1o9d_A 152 ESTLTAYKAAQDIATTELAPTH--------PIRLGLALNFSVFYYEILNSPDRACNLAKQAF 205 (260)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCC--------cHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 467888999998764 355554 5667788999988886 688999988888764
No 347
>3ubw_A 14-3-3E, 14-3-3 protein epsilon; adapter protein, signaling protein, signaling protein-protei complex; HET: SEP; 1.90A {Homo sapiens}
Probab=53.98 E-value=25 Score=31.64 Aligned_cols=52 Identities=15% Similarity=0.124 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHhhcc-cCCCCChHHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 015006 203 ELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 262 (414)
Q Consensus 203 ~~A~~~Y~~al~~~~-~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-l~~~~~A~~~~~~al 262 (414)
+.|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 173 e~a~~aY~~A~~iA~~~L~pTh--------PirLGLaLNfSVFyYEIln~p~~Ac~LAk~AF 226 (261)
T 3ubw_A 173 ENSLVAYKAASDIAMTELPPTH--------PIRLGLALNFSVFYYEILNSPDRACRLAKAAF 226 (261)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 567788999887653 355544 5667788888888776 688888888887764
No 348
>3lpz_A GET4 (YOR164C homolog); protein targeting, tail-anchored protein biogenesis, GET PAT GET5 binding, protein transport; 1.98A {Chaetomium thermophilum}
Probab=53.46 E-value=94 Score=29.00 Aligned_cols=111 Identities=17% Similarity=0.183 Sum_probs=56.3
Q ss_pred hhHHHHHHHhhhccccccccHHHHHHHHHH-HHhhcccCCCCChHHHH-----HHhh----hhhHHHHHHHHHHHHcCC-
Q 015006 182 IMDEAEKIRVTGNRLFKEGKFELAKAKYEK-VLRDFNHVNPQDDEEGK-----VFVG----KRNLLHLNVAACLLKLGE- 250 (414)
Q Consensus 182 ~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~-al~~~~~~~p~~~~e~~-----~~~~----~~~~~~~N~a~~~~kl~~- 250 (414)
..+.-+.++-..+.+.++++|.+|+..... |+..+..-.....-+-. .+.+ .......++..++.....
T Consensus 31 ~YEAHQ~~RTi~~Ry~~~k~y~eAidLL~~GA~~ll~~~Q~~sg~DL~~llvevy~~~~~~~~~~~~~rL~~L~~~~~~~ 110 (336)
T 3lpz_A 31 QYEAAQETRLVAARYSKQGNWAAAVDILASVSQTLLRSGQGGSGGDLAVLLVDTFRQAGQRVDGASRGKLLGCLRLFQPG 110 (336)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTSCTT
T ss_pred ccHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCC
Confidence 355556677777888888999998886444 33332211000000000 0000 000112222333222221
Q ss_pred -------HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHH
Q 015006 251 -------CRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDF 292 (414)
Q Consensus 251 -------~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~ 292 (414)
..+|+.+..+.=...-.++.-+...|..+.+.++|.+|...|
T Consensus 111 ~p~r~~fi~~ai~WS~~~g~~~~Gdp~LH~~ig~~~~~e~~~~~Ae~H~ 159 (336)
T 3lpz_A 111 EPVRKRFVKEMIDWSKKFGDYPAGDPELHHVVGTLYVEEGEFEAAEKHL 159 (336)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTCCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHccCCHHHHHHHH
Confidence 123333333311112356888889999999999999998887
No 349
>2jpu_A ORF C02003 protein; solution structure, SSR10, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Sulfolobus solfataricus} PDB: 2q00_A
Probab=52.08 E-value=38 Score=26.91 Aligned_cols=31 Identities=23% Similarity=0.250 Sum_probs=27.9
Q ss_pred HHHHHHHhhhccccccccHHHHHHHHHHHHh
Q 015006 184 DEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 214 (414)
Q Consensus 184 ~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~ 214 (414)
..|..+...|.+++.+|+.-+|.+.|-+|..
T Consensus 5 ~lAe~yL~EA~ell~kGD~vQAsEK~ykAae 35 (129)
T 2jpu_A 5 TSAEVYYEEAEEFLSKGDLVQACEKYYKAAE 35 (129)
T ss_dssp CHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 4688899999999999999999999999887
No 350
>3iqu_A 14-3-3 protein sigma; signal transuction, nucleus, phosphoprotein, secreted, prote binding, signaling protein; HET: SEP; 1.05A {Homo sapiens} SCOP: a.118.7.1 PDB: 3iqj_A* 3iqv_A* 3mhr_A* 3lw1_A* 3o8i_A* 3p1n_A* 3p1o_A* 3t0l_A* 3t0m_A* 3u9x_A* 3ux0_A* 4dat_A* 4dau_A* 3p1s_A* 3p1r_A* 3smk_A* 3spr_A* 3p1q_A* 3p1p_A* 3sml_A* ...
Probab=50.45 E-value=27 Score=30.92 Aligned_cols=53 Identities=15% Similarity=0.226 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhhcc-cCCCCChHHHHHHhhhhhHHHHHHHHHHHH-cCCHHHHHHHHHHHH
Q 015006 202 FELAKAKYEKVLRDFN-HVNPQDDEEGKVFVGKRNLLHLNVAACLLK-LGECRKSIEACNKVL 262 (414)
Q Consensus 202 y~~A~~~Y~~al~~~~-~~~p~~~~e~~~~~~~~~~~~~N~a~~~~k-l~~~~~A~~~~~~al 262 (414)
-+.|...|+.|..+.. .+.|.+ +++..+.+|.+..|+. +++.++|+..+.+|+
T Consensus 149 ~e~a~~aY~~A~~iA~~~L~pth--------PirLGLaLNfSVFyyEiln~~~~Ac~lAk~Af 203 (236)
T 3iqu_A 149 IDSARSAYQEAMDISKKEMPPTN--------PIRLGLALNFSVFHYEIANSPEEAISLAKTTF 203 (236)
T ss_dssp HHHHHHHHHHHHHHHHHHSCTTC--------HHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhCCCCC--------cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4567888999988654 355554 5677788999888874 588999988888774
No 351
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=49.22 E-value=3.6 Score=37.11 Aligned_cols=41 Identities=17% Similarity=0.114 Sum_probs=0.0
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccC
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 219 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~ 219 (414)
-...+..|..+..+|..+=+.|+|.+|+.+|..|+.+|...
T Consensus 16 ~dp~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~a 56 (257)
T 2ymb_A 16 QDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQV 56 (257)
T ss_dssp -----------------------------------------
T ss_pred CChhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 34455678888899999999999999999999999977543
No 352
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=49.12 E-value=46 Score=24.54 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
+..+...|.-++..++|.+|...|+++..+.
T Consensus 53 ~r~~i~eak~~y~~~ny~ea~~l~~k~~n~t 83 (106)
T 2vkj_A 53 ARSLIAEGKDLFETANYGEALVFFEKALNLS 83 (106)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhcchhHHHHHHHHHHccc
Confidence 3444555667777888888888888887664
No 353
>4b4t_P 26S proteasome regulatory subunit RPN5; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=48.89 E-value=1.6e+02 Score=28.46 Aligned_cols=80 Identities=8% Similarity=0.045 Sum_probs=57.6
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHH-h---CCC--cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh---hCCCCHH
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLD-A---NPA--HVKGLYRRGMAYMALGEFEEAQRDFEMMMK---VDKSSEP 304 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~-~---dp~--~~ka~~r~g~a~~~l~~~~eA~~~~~~al~---l~P~n~~ 304 (414)
++.+..-+|..|...|+|.+|......... . ++. -+..+....+.+...++|..|...+.++.. -.+.+ +
T Consensus 136 rarl~~~La~i~e~~g~~~eA~~iL~~l~~Et~~~~~~~~kve~~l~q~rl~l~~~d~~~a~~~~~ki~~~~~~~~~~-~ 214 (445)
T 4b4t_P 136 RARVTKDLVEIKKEEGKIDEAADILCELQVETYGSMEMSEKIQFILEQMELSILKGDYSQATVLSRKILKKTFKNPKY-E 214 (445)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSSSCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSSCC-H
T ss_pred HHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhcccCCc-H
Confidence 556777899999999999999998887642 2 121 256778889999999999999999998742 23333 4
Q ss_pred HHHHHHHHHH
Q 015006 305 DATAALSKLK 314 (414)
Q Consensus 305 ~~~~~l~~~~ 314 (414)
..+..+..+.
T Consensus 215 ~lk~~~~~~~ 224 (445)
T 4b4t_P 215 SLKLEYYNLL 224 (445)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 354
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=47.85 E-value=95 Score=24.05 Aligned_cols=15 Identities=20% Similarity=0.239 Sum_probs=7.7
Q ss_pred HHHHHHHHHhhCCCC
Q 015006 288 AQRDFEMMMKVDKSS 302 (414)
Q Consensus 288 A~~~~~~al~l~P~n 302 (414)
|++.|..+++..+.+
T Consensus 44 Aie~l~~alk~e~~~ 58 (117)
T 2cpt_A 44 AVQYFLHVVKYEAQG 58 (117)
T ss_dssp HHHHHHHHHHTSCCC
T ss_pred HHHHHHHHHHhccCC
Confidence 344445555556555
No 355
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=47.66 E-value=62 Score=26.65 Aligned_cols=70 Identities=13% Similarity=0.170 Sum_probs=53.3
Q ss_pred cccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHH
Q 015006 199 EGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMA 278 (414)
Q Consensus 199 ~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a 278 (414)
.++.++|...|+.++.... .. +.++...|.--++.|+...|.....+|+.+.|. ++-++..|..
T Consensus 73 i~D~d~aR~vy~~a~~~hK--------------kF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k-~~~~le~a~~ 136 (161)
T 4h7y_A 73 IQEPDDARDYFQMARANCK--------------KF-AFVHISFAQFELSQGNVKKSKQLLQKAVERGAV-PLEMLEIALR 136 (161)
T ss_dssp HHCGGGCHHHHHHHHHHCT--------------TB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCB-CHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHhH--------------HH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCC-cHHHHHHHHH
Confidence 3788889999999988411 11 678888888889999999999999999998874 4555555555
Q ss_pred HHHcCC
Q 015006 279 YMALGE 284 (414)
Q Consensus 279 ~~~l~~ 284 (414)
-++.|.
T Consensus 137 nl~~~~ 142 (161)
T 4h7y_A 137 NLNLQK 142 (161)
T ss_dssp HHHTTC
T ss_pred hhhcCC
Confidence 555554
No 356
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=47.19 E-value=64 Score=26.68 Aligned_cols=68 Identities=16% Similarity=0.203 Sum_probs=44.2
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHH-HHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLH-LNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~-~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
-...|..+|..|+|-+|-..+..+-. ..+...++...+ ...+. .-.|..+++.|++..|...+.+++.
T Consensus 35 ~~~~~i~lFn~g~yfeaHEvLEe~W~----~~~~~~~er~~l---qGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~ 103 (161)
T 2ijq_A 35 AVVHGVRLYNSGEFHESHDCFEDEWY----NYGRGNTESKFL---HGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQ 103 (161)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHTT----TTCSSSHHHHHH---HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCchHHHHHHHHHHH----hcCCCchHHHHH---HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34677888999999999998887765 222221222111 22233 4455566677888888888888865
No 357
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=45.77 E-value=26 Score=33.85 Aligned_cols=63 Identities=10% Similarity=0.094 Sum_probs=54.6
Q ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC---CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 236 LLHLNVAACLLKLGECRKSIEACNKVLDANP---AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 236 ~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp---~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
.++..+|.-|++.|++..|+..+.++..... .-...++..-+++...++|..|...+.+|..+
T Consensus 132 ~~~~~la~~~~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~ 197 (429)
T 4b4t_R 132 QAWINLGEYYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSM 197 (429)
T ss_dssp SCCHHHHHHHHHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 4677899999999999999999999876532 34778899999999999999999999999766
No 358
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=44.97 E-value=33 Score=35.30 Aligned_cols=50 Identities=24% Similarity=0.179 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFE 286 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~ 286 (414)
....+|...+..|+|.-|.+.++.++..+|+|..|..-++.+|.++|.-.
T Consensus 451 ~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~~~a~~l~a~~~~~l~~~~ 500 (658)
T 2cfu_A 451 RLLEQARASYARGEYRWVVEVVNRLVFAEPDNRAARELQADALEQLGYQA 500 (658)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 45567888889999999999999999999999999999999999887543
No 359
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=44.83 E-value=37 Score=25.44 Aligned_cols=28 Identities=18% Similarity=0.313 Sum_probs=21.9
Q ss_pred HHHHHHHHcCCHHHHHHHHHHHHhhCCC
Q 015006 274 RRGMAYMALGEFEEAQRDFEMMMKVDKS 301 (414)
Q Consensus 274 r~g~a~~~l~~~~eA~~~~~~al~l~P~ 301 (414)
.+|..++..|+++.|+..|-+|+.+.|.
T Consensus 25 ~lGE~L~~~g~~e~av~Hf~nAl~Vc~q 52 (95)
T 1om2_A 25 QLGEELLAQGDYEKGVDHLTNAIAVCGQ 52 (95)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHcCC
Confidence 4577777888888888888888888776
No 360
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=44.61 E-value=84 Score=22.51 Aligned_cols=26 Identities=15% Similarity=0.346 Sum_probs=18.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 273 YRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 273 ~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
..+|+=+..+|+|+.|+.+|+.+++.
T Consensus 16 ~k~ARe~Al~GnYdta~~yY~g~~~q 41 (78)
T 2rpa_A 16 VKLAREYALLGNYDSAMVYYQGVLDQ 41 (78)
T ss_dssp HHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcChHHHHHHHHHHHHH
Confidence 45566677777777777777777653
No 361
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=44.38 E-value=87 Score=32.13 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=44.7
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLKKQRQE 319 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~~~~~~ 319 (414)
.-..+...+|+..+..|+|.-|.+.+..++..+|+| .+++..+..+..++..
T Consensus 447 gg~~~~~~~a~~~~~~g~~~wa~~l~~~~~~~~p~~-~~a~~l~a~~~~~l~~ 498 (658)
T 2cfu_A 447 GGAERLLEQARASYARGEYRWVVEVVNRLVFAEPDN-RAARELQADALEQLGY 498 (658)
T ss_dssp TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC-HHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCCCc-HHHHHHHHHHHHHHHH
Confidence 456788889999999999999999999999999999 6788888877666553
No 362
>3efz_A 14-3-3 protein; 14-3-3, cell regulation, structural genom structural genomics consortium, SGC; HET: SEP; 2.08A {Cryptosporidium parvum} SCOP: a.118.7.1 PDB: 2ijp_A*
Probab=44.12 E-value=28 Score=31.39 Aligned_cols=55 Identities=20% Similarity=0.170 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHhhcc-cC--CCCChHHHHHHhhhhhHHHHHHHHHHH-HcCCHHHHHHHHHHHHHh
Q 015006 202 FELAKAKYEKVLRDFN-HV--NPQDDEEGKVFVGKRNLLHLNVAACLL-KLGECRKSIEACNKVLDA 264 (414)
Q Consensus 202 y~~A~~~Y~~al~~~~-~~--~p~~~~e~~~~~~~~~~~~~N~a~~~~-kl~~~~~A~~~~~~al~~ 264 (414)
-+.|...|+.|..+.. .+ .|. ++++..+.+|.+..|+ -+++.++|+..+++|+.-
T Consensus 168 ~e~a~~aYq~A~eiA~~~L~~~pT--------hPiRLGLaLNfSVFyYEIln~p~~Ac~lAk~AFde 226 (268)
T 3efz_A 168 IKQAVEFYEDALQRERSFLEKYPS--------DPLYLATILNYTILKYDLLGNPEGAMKFANRAIQA 226 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTGGG--------CHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCC--------ChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 3567788888887543 23 333 4566778888888877 468888888888887653
No 363
>3qnk_A Putative lipoprotein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=43.82 E-value=1.6e+02 Score=28.88 Aligned_cols=48 Identities=13% Similarity=0.104 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHhCCC-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 251 CRKSIEACNKVLDANPA-----------HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~-----------~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
|+..+.+++.|+..-|. ..-|+--+|++++..++|++|...+++++..
T Consensus 153 ~~~I~~dL~~A~~~Lp~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 211 (517)
T 3qnk_A 153 YDFILEDLKKATEMLPASYGSREKGRATKGAAYALKSRVELYDKRYEDVIKSCAEVYKL 211 (517)
T ss_dssp HHHHHHHHHHHHHHSCSCCCSTTTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhCccccCCcccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56667777777765442 2457778899999999999999999999864
No 364
>3lvg_A Clathrin heavy chain 1; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} PDB: 3lvh_A
Probab=42.91 E-value=0.075 Score=52.71 Aligned_cols=100 Identities=21% Similarity=0.296 Sum_probs=68.3
Q ss_pred HHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCc
Q 015006 189 IRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDANPAH 268 (414)
Q Consensus 189 ~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~ 268 (414)
...-|..+|..|.|+.|.-+|+..-. |..+|.|+.++++|..|++.+.+| +|
T Consensus 147 iq~VGDrcf~e~lYeAAKilys~isN-----------------------~akLAstLV~L~~yq~AVdaArKA-----ns 198 (624)
T 3lvg_A 147 IQQVGDRCYDEKMYDAAKLLYNNVSN-----------------------FGRLASTLVHLGEYQAAVDGARKA-----NS 198 (624)
T ss_dssp THHHHHHHHHSCCSTTSSTTGGGSCC-----------------------CTTTSSSSSSCSGGGSSTTTTTTC-----CS
T ss_pred HHHHHHHHHHccCHHHHHHHHHhCcc-----------------------HHHHHHHHHHHHHHHHHHHHHHhc-----CC
Confidence 34678888999999888777754222 223888899999999999998888 77
Q ss_pred HHHHHHHHHHHHHcCCHHHH------------------------------HHHHHHHHhhCCCCHHHHHHHHHHHHHHH
Q 015006 269 VKGLYRRGMAYMALGEFEEA------------------------------QRDFEMMMKVDKSSEPDATAALSKLKKQR 317 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA------------------------------~~~~~~al~l~P~n~~~~~~~l~~~~~~~ 317 (414)
++.|-....|+...++|.-| +..++.+|.++-.+ -.+-.+|..+..+.
T Consensus 199 ~ktWKeV~~ACvd~~EfrLAqicGLniIvhadeL~elv~~YE~~G~f~ELIsLlEaglglErAH-mGmFTELaILYsKY 276 (624)
T 3lvg_A 199 TRTWKEVCFACVDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAH-MGMFTELAILYSKF 276 (624)
T ss_dssp SCSHHHHTHHHHHSCTTTTTTHHHHHHHCCSSCCSGGGSSSSTTCCCTTSTTTHHHHTTSTTCC-HHHHHHHHHHHHSS
T ss_pred hhHHHHHHHHHhCchHHHHHHHhcchhcccHHHHHHHHHHHHhCCCHHHHHHHHHHHhCCCchh-HHHHHHHHHHHHhc
Confidence 77777776676665555444 44566666666555 34555666655443
No 365
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=41.86 E-value=96 Score=22.37 Aligned_cols=21 Identities=19% Similarity=0.249 Sum_probs=9.8
Q ss_pred HHHHHcCCHHHHHHHHHHHHh
Q 015006 277 MAYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 277 ~a~~~l~~~~eA~~~~~~al~ 297 (414)
...-..|+|++|+..|..|++
T Consensus 27 ve~D~~g~y~eAl~lY~~aie 47 (83)
T 2w2u_A 27 VKADKEGNAEEAITNYKKAIE 47 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHH
Confidence 333445555555544444443
No 366
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=41.65 E-value=59 Score=27.87 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=36.6
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHH-----HHHHcCCHH
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGM-----AYMALGEFE 286 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~-----a~~~l~~~~ 286 (414)
.+..++-+|..++-.++|.+|..++..|+..-|.......++-. +.+-+|++.
T Consensus 13 ~v~Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~~~~~~~k~~IL~yLIp~~Ll~G~iP 70 (203)
T 3t5x_A 13 RVTYKYYVGRKAMFDSDFKQAEEYLSFAFEHCHRSSQKNKRMILIYLLPVKMLLGHMP 70 (203)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHcCCCC
Confidence 35667778888888899999999999998887765444333322 224456654
No 367
>3ax2_A Mitochondrial import receptor subunit TOM20 homol; protein-protein complex, membrane protein-transport protein; 1.90A {Rattus norvegicus} PDB: 2v1s_A 3awr_A 2v1t_A 3ax5_A 3ax3_A
Probab=41.52 E-value=24 Score=25.12 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=25.8
Q ss_pred HHHHHhhhccccccccHHHHHHHHHHHHhhc
Q 015006 186 AEKIRVTGNRLFKEGKFELAKAKYEKVLRDF 216 (414)
Q Consensus 186 a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~ 216 (414)
-..-...|..+...|++.+|+.+|.+|+.++
T Consensus 17 Fl~eV~~GE~L~~~g~~~~~~~hf~nAl~Vc 47 (73)
T 3ax2_A 17 FLEEIQLGEELLAQGDYEKGVDHLTNAIAVC 47 (73)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHc
Confidence 3445678888999999999999999999944
No 368
>2wpv_A GET4, UPF0363 protein YOR164C; golgi-ER trafficking, tail-anchored protein, protein binding GET4; 1.99A {Saccharomyces cerevisiae} PDB: 3lku_A
Probab=41.31 E-value=1.5e+02 Score=27.30 Aligned_cols=27 Identities=19% Similarity=-0.021 Sum_probs=23.4
Q ss_pred CcHHHHHHHHHHHHHcCCHHHHHHHHH
Q 015006 267 AHVKGLYRRGMAYMALGEFEEAQRDFE 293 (414)
Q Consensus 267 ~~~ka~~r~g~a~~~l~~~~eA~~~~~ 293 (414)
.++.-|...|..+.+-+++.+|...|-
T Consensus 132 Gdp~LH~~~a~~~~~e~~~~~A~~H~i 158 (312)
T 2wpv_A 132 GDPYLHNTIGSKLLEGDFVYEAERYFM 158 (312)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCHHHHHHHHH
Confidence 467888899999999999999998775
No 369
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=40.87 E-value=36 Score=36.73 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=39.3
Q ss_pred HHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 015006 243 ACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 243 ~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~ 297 (414)
..++..+.++-| ...+..-|.++-.-|-+|+++..+|++++|...|++|-.
T Consensus 818 ~~L~~~~~~~~a----~eL~~~~~~t~~~~yv~gr~~L~~ge~~~A~~~F~kAA~ 868 (950)
T 4gq2_M 818 EKLFLFKQYNAC----MQLIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTSL 868 (950)
T ss_dssp HHHHHTTCHHHH----HHHGGGCCSSHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHHHhcHHHHH----HHHHhhcCCChHHHHHHHHHHHHcCCHHHHHHHHHHHhh
Confidence 334455555543 345566788888889999999999999999999998753
No 370
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=40.58 E-value=52 Score=31.25 Aligned_cols=30 Identities=20% Similarity=0.203 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
+.|+|+.|..+...+++-+|+..|+.|.+.
T Consensus 253 A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~ 282 (376)
T 3r9m_A 253 AYAYCYHGETLLASDKCGEAIRSLQEAEKL 282 (376)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 667788888888889999998888877654
No 371
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=40.31 E-value=54 Score=35.35 Aligned_cols=75 Identities=9% Similarity=-0.075 Sum_probs=47.2
Q ss_pred HhhhccccccccHHHHHHHHHHHHhhcccCCCCCh--HHHH------HHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHH
Q 015006 190 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDD--EEGK------VFVGKRNLLHLNVAACLLKLGECRKSIEACNKV 261 (414)
Q Consensus 190 k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~--~e~~------~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~a 261 (414)
.-+|..++..|++++|..+|.+|-.-+..-..... .... .........|+..+..+-+.+.|..++..+..|
T Consensus 844 yv~gr~~L~~ge~~~A~~~F~kAA~gl~~~~~~~~~~~~~~~ll~~~e~~~~~~~YY~hV~~LFE~~~a~~~vi~fA~lA 923 (950)
T 4gq2_M 844 YLKALIYLKSKEAVKAVRCFKTTSLVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEESAYIDALEFSLLA 923 (950)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTCCCTTCSSCCSCGGGHHHHHHHHHTTTCSHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHhhhcccCcccccchhhhhhccCcccccchhHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 45788999999999999999997653321111110 0000 011123346677777777778888888888888
Q ss_pred HHh
Q 015006 262 LDA 264 (414)
Q Consensus 262 l~~ 264 (414)
|..
T Consensus 924 I~~ 926 (950)
T 4gq2_M 924 DAS 926 (950)
T ss_dssp HHT
T ss_pred Hhh
Confidence 764
No 372
>2yin_A DOCK2, dedicator of cytokinesis protein 2; apoptosis, DOCK, DOCK guanine nucleotide exchange factors; 2.70A {Homo sapiens} PDB: 3b13_A
Probab=37.69 E-value=44 Score=32.53 Aligned_cols=95 Identities=6% Similarity=0.006 Sum_probs=55.5
Q ss_pred HhhhccccccccHHHHHHHHHHHHhhcccCCCCC--------hH-HHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHH
Q 015006 190 RVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQD--------DE-EGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNK 260 (414)
Q Consensus 190 k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~--------~~-e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~ 260 (414)
....+.+.+.++|.+|..++......+.. .+.. .. ....-......+|...+..+.+-+.|+.|+..|+.
T Consensus 39 ~~L~~~h~~~~ny~EAa~~l~lhA~l~~w-~~~~~~~~~~~~~~~~~qt~~~~ke~L~~~~i~~f~kg~~~E~ai~l~k~ 117 (436)
T 2yin_A 39 YKLRDLHLDCDNYTEAAYTLLLHTWLLKW-SDEQCASQVMQTGQQHPQTHRQLKETLYETIIGYFDKGKMWEEAISLCKE 117 (436)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTTCCS-SCCC--------------CHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHCcCHHHHHHHHHHHHHHhCC-CccccCcccccCCCCccccHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 45577888999999999998665554332 1111 00 00011122334566666666677889999999988
Q ss_pred HHHhCCCcHHHHHHHHHHHHHcCCH
Q 015006 261 VLDANPAHVKGLYRRGMAYMALGEF 285 (414)
Q Consensus 261 al~~dp~~~ka~~r~g~a~~~l~~~ 285 (414)
++..--.+..-|-.++.+|..+.++
T Consensus 118 L~~~yE~~~~Dy~~Ls~~~~~~a~~ 142 (436)
T 2yin_A 118 LAEQYEMEIFDYELLSQNLIQQAKF 142 (436)
T ss_dssp HHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8754333333455566666665433
No 373
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=37.67 E-value=1.1e+02 Score=21.93 Aligned_cols=43 Identities=14% Similarity=0.142 Sum_probs=20.3
Q ss_pred HHHHHcCCHHHHHHHH-------HHHHhhCCCCHHHHHHHHHHHHHHHHHHHHHH
Q 015006 277 MAYMALGEFEEAQRDF-------EMMMKVDKSSEPDATAALSKLKKQRQEVESKA 324 (414)
Q Consensus 277 ~a~~~l~~~~eA~~~~-------~~al~l~P~n~~~~~~~l~~~~~~~~~~~~~~ 324 (414)
...-..|+|++|+..| ..+++..|+.. . ...++.+..++..+.
T Consensus 19 ve~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~--~---k~~ir~K~~eY~~RA 68 (83)
T 2v6y_A 19 VKADKEGKVEDAITYYKKAIEVLSQIIVLYPESV--A---RTAYEQMINEYKKRI 68 (83)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCT--T---HHHHHHHHHHHHHHH
T ss_pred HHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHH--H---HHHHHHHHHHHHHHH
Confidence 3334455555555544 44555566542 1 233445555554443
No 374
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=37.33 E-value=46 Score=36.62 Aligned_cols=52 Identities=13% Similarity=0.212 Sum_probs=40.1
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Q 015006 241 VAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMM 296 (414)
Q Consensus 241 ~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al 296 (414)
++...++.+.++-|.. .+..-|.++-.-|-+|.++...|++++|...|++|-
T Consensus 818 l~~~l~~~~~~~~~~~----l~~~~~~~~~~~yl~g~~~L~~ge~~~A~~~F~kaa 869 (1139)
T 4fhn_B 818 LVEKLFLFKQYNACMQ----LIGWLNSDPIAVYLKALIYLKSKEAVKAVRCFKTTS 869 (1139)
T ss_dssp HHHHHHHHSCTTHHHH----HHHHSCCCHHHHHHHHHHHHHTTCHHHHHHHHHTCC
T ss_pred HHHHHHHhhhHHHHHH----HhhhccCCcHHHHHHHHHHHhcCCHHHHHHHHHHHh
Confidence 4444556666655433 445667888888999999999999999999999874
No 375
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=34.05 E-value=8.6 Score=37.60 Aligned_cols=40 Identities=23% Similarity=0.316 Sum_probs=0.0
Q ss_pred hhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccC
Q 015006 180 DGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHV 219 (414)
Q Consensus 180 ~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~ 219 (414)
.+.++.|..+..+|..+=+.|+|.+|+.+|..|+.+|...
T Consensus 5 ~~~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~ 44 (444)
T 2zan_A 5 NTNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHV 44 (444)
T ss_dssp ----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3456678888899999999999999999999999987543
No 376
>4abx_A DNA repair protein RECN; DNA binding protein, ATP binding protein, double break repair, coiled-coil; HET: DNA; 2.04A {Deinococcus radiodurans}
Probab=33.85 E-value=1.5e+02 Score=24.46 Aligned_cols=61 Identities=16% Similarity=0.066 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCCCCHHHHHHHHHHHH
Q 015006 254 SIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKVDKSSEPDATAALSKLK 314 (414)
Q Consensus 254 A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~P~n~~~~~~~l~~~~ 314 (414)
|+.....+..++|......-++..++..+.+....+..|...+..||..-..+...|..+.
T Consensus 75 a~~~L~~l~~~d~~l~~~~e~l~~a~~~l~d~~~~L~~y~~~le~DP~rL~~ie~RL~~l~ 135 (175)
T 4abx_A 75 AVRALNAGAKYDETVMQLQNELRAALESVQAIAGELRDVAEGSAADPEALDRVEARLSALS 135 (175)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4444555556777767777888889998888888888888777777753223333344333
No 377
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=33.41 E-value=95 Score=30.04 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=24.2
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..++.-+|.+|+-+++|.+|+..|+++|.
T Consensus 190 ~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 190 YAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 45666788888889999999999998885
No 378
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=32.65 E-value=1.6e+02 Score=27.82 Aligned_cols=30 Identities=17% Similarity=0.166 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
+.|+|+.|..+...+++-+|+..|+.|.+.
T Consensus 257 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 286 (392)
T 1zb1_A 257 SLSAYYHGLHLEEENRVGEAIAFLDFSMQQ 286 (392)
T ss_dssp HHHHHHHHHHHHHTTCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccchHHHHHHHHHHHHH
Confidence 446677777778888888888888877643
No 379
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=30.65 E-value=1e+02 Score=29.82 Aligned_cols=29 Identities=10% Similarity=0.122 Sum_probs=23.7
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..++.-+|.+|+-+++|.+|+..|+++|.
T Consensus 196 ~aa~allArvyL~~~~~~~A~~~a~~vi~ 224 (461)
T 3kez_A 196 WAAMTLLSRVYLYKGEYNEALTMAENAIK 224 (461)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 45666688888888999999999998875
No 380
>3myv_A SUSD superfamily protein; RAGB, SUSD and hypothetical proteins, structural genomics, J center for structural genomics, JCSG; HET: MSE; 1.80A {Bacteroides vulgatus}
Probab=30.59 E-value=1.1e+02 Score=29.55 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Q 015006 251 CRKSIEACNKVLDANPA--------HVKGLYRRGMAYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~--------~~ka~~r~g~a~~~l~~~~eA~~~~~~al~ 297 (414)
|+..+.+++.|+.+-|. ..-|+--+|++|+.+++|++|+...++++.
T Consensus 164 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~ 218 (454)
T 3myv_A 164 YDFIIETLEEAVTLMSEEKNNGRMNKYAARALLARIYLYHDDNRKAFDLADQLIK 218 (454)
T ss_dssp HHHHHHHHHHHHHHCCCSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccccccCCeecHHHHHHHHHHHHHhcccHHHHHHHHHHHHh
Confidence 56777888888776543 355777889999999999999999988875
No 381
>1om2_A Protein (mitochondrial import receptor subunit TOM20); mitochondrial protein import across outer membrane, receptor for presequences; NMR {Rattus norvegicus} SCOP: a.23.4.1
Probab=30.58 E-value=62 Score=24.21 Aligned_cols=39 Identities=10% Similarity=0.135 Sum_probs=29.2
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
.+++-..-..-...|..++..|+++.|+.+|.+||.++.
T Consensus 13 ~e~~e~~Fl~eV~lGE~L~~~g~~e~av~Hf~nAl~Vc~ 51 (95)
T 1om2_A 13 AEAVQKFFLEEIQLGEELLAQGDYEKGVDHLTNAIAVCG 51 (95)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHcC
Confidence 333434445556788888899999999999999998653
No 382
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=30.44 E-value=1.1e+02 Score=29.83 Aligned_cols=30 Identities=20% Similarity=0.320 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
..++.-+|.+|+-+++|.+|+..|+++|..
T Consensus 202 ~aa~allarvyL~~~~~~~A~~~a~~vi~~ 231 (477)
T 3mcx_A 202 WAAQALLSRVYLNMGEYQKAYDAATDVIKN 231 (477)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhC
Confidence 456667888888899999999999998864
No 383
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=30.16 E-value=1.6e+02 Score=21.55 Aligned_cols=14 Identities=14% Similarity=0.031 Sum_probs=7.3
Q ss_pred HHHHHHHHHhhCCC
Q 015006 288 AQRDFEMMMKVDKS 301 (414)
Q Consensus 288 A~~~~~~al~l~P~ 301 (414)
|++.|..+++..|+
T Consensus 41 Aie~l~~alk~e~~ 54 (93)
T 1wfd_A 41 GIDMLLQVLKGTKE 54 (93)
T ss_dssp HHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHCCC
Confidence 34445555555665
No 384
>3i4g_A SUSD-like carbohydrate binding protein BF1063; structural genomics, center for structural genomics, JCSG; HET: MSE EPE; 1.35A {Bacteroides fragilis nctc 9343}
Probab=29.63 E-value=2.3e+02 Score=28.00 Aligned_cols=48 Identities=13% Similarity=0.196 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHhCCC-------------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 251 CRKSIEACNKVLDANPA-------------HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~-------------~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
|+..+.+++.|+..-|. ..-|+--+|++++..++|++|...+++++..
T Consensus 167 ~~~I~~DL~~A~~~Lp~~~~~~~~~~gr~tk~aA~allarv~L~~~~~~~A~~~a~~vi~~ 227 (528)
T 3i4g_A 167 LKWCVTEFTAAAADLPRFSAIPAGEAGRACKQAALAFLGRTCMLQKDWKSGAKAFHDIMEL 227 (528)
T ss_dssp HHHHHHHHHHHHHHSCCGGGCCGGGTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCccccCCcccCCcCcHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 55667777777766552 1457777899999999999999999998864
No 385
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=29.24 E-value=4.6e+02 Score=28.66 Aligned_cols=67 Identities=10% Similarity=0.000 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh----CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CCC
Q 015006 235 NLLHLNVAACLLKLGECRKSIEACNKVLDA----NPAHVKGLYRRGMAYMALGEFEEAQRDFEMMMKV--DKS 301 (414)
Q Consensus 235 ~~~~~N~a~~~~kl~~~~~A~~~~~~al~~----dp~~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l--~P~ 301 (414)
...|+-+-.+|.|.|+.++|...+...-+. -..++-.|--+=..|.+.|++++|++.|.+..+. .|+
T Consensus 127 ~~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM~~~G~~PD 199 (1134)
T 3spa_A 127 QQRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMVKDAGLTPD 199 (1134)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCc
Confidence 346777888999999999999999664321 2347888999999999999999999999998764 565
No 386
>2rkl_A Vacuolar protein sorting-associated protein VTA1; dimerization motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 1.50A {Saccharomyces cerevisiae} PDB: 3mhv_A
Probab=27.44 E-value=55 Score=21.59 Aligned_cols=40 Identities=15% Similarity=0.139 Sum_probs=32.6
Q ss_pred chhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcc
Q 015006 178 SFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFN 217 (414)
Q Consensus 178 ~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~ 217 (414)
+..+.+..|.++-.-+.....-.+...|++..++||+++.
T Consensus 12 ~~~~~i~~AqK~aK~AiSAL~feDv~tA~~~L~~AL~lL~ 51 (53)
T 2rkl_A 12 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLN 51 (53)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHh
Confidence 4556777888888888888888899999999999988653
No 387
>2oo2_A Hypothetical protein AF_1782; structural genomics, unknown function, PSI-2, protein struct initiative; 1.80A {Archaeoglobus fulgidus dsm 4304} SCOP: a.8.11.1
Probab=27.15 E-value=42 Score=24.65 Aligned_cols=36 Identities=14% Similarity=0.075 Sum_probs=30.3
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHh
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 214 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~ 214 (414)
..+.++.|..+.+.|..++++|++..|+.++.=|-.
T Consensus 28 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~G 63 (86)
T 2oo2_A 28 DEGFMRNIEAYISDSRYFLEKGDLVRAFECVVWAWA 63 (86)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467788999999999999999999999988765544
No 388
>3t5x_A PCI domain-containing protein 2; PCI, mRNA nuclear export, transcription; 2.12A {Homo sapiens}
Probab=26.77 E-value=1.6e+02 Score=24.99 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhhCC
Q 015006 271 GLYRRGMAYMALGEFEEAQRDFEMMMKVDK 300 (414)
Q Consensus 271 a~~r~g~a~~~l~~~~eA~~~~~~al~l~P 300 (414)
-+|.+|+.++..++|.+|.++|..|+...|
T Consensus 16 Y~YYlGr~~~~~~~y~~A~~~L~~A~~~~~ 45 (203)
T 3t5x_A 16 YKYYVGRKAMFDSDFKQAEEYLSFAFEHCH 45 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHCC
Confidence 344445555555555555555555554444
No 389
>3kez_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=26.65 E-value=1.3e+02 Score=29.15 Aligned_cols=48 Identities=17% Similarity=0.125 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 251 CRKSIEACNKVLDANPA--------HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~--------~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
|+..+.+++.|+.+-|. ..-|+--+|++|+.+++|++|+...++++..
T Consensus 170 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allArvyL~~~~~~~A~~~a~~vi~~ 225 (461)
T 3kez_A 170 YTEIISDLKNSTELLSGDFNKGKVNRWAAMTLLSRVYLYKGEYNEALTMAENAIKG 225 (461)
T ss_dssp HHHHHHHHHHHHHHSCCSCCTTSCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccccCCCeeeHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 56777888888776543 2557777899999999999999999888753
No 390
>2pmr_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.32A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: a.8.11.1
Probab=26.61 E-value=43 Score=24.63 Aligned_cols=36 Identities=8% Similarity=0.023 Sum_probs=29.9
Q ss_pred hhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHh
Q 015006 179 FDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLR 214 (414)
Q Consensus 179 ~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~ 214 (414)
..+.++.|..+.+.|..++++|++..|+.++.=|-.
T Consensus 32 a~~~l~mA~~Y~~Da~~fl~kGD~v~Ala~isYa~G 67 (87)
T 2pmr_A 32 EEAVVERALNYRDDSVYYLEKGDHITSFGCITYAHG 67 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 467788899999999999999999999888655443
No 391
>2ijq_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.88A {Haloarcula marismortui} SCOP: a.246.2.1
Probab=26.59 E-value=2.7e+02 Score=22.86 Aligned_cols=58 Identities=14% Similarity=0.157 Sum_probs=42.9
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHhCCCc------HHHHHH-HHHHHH--HcCCHHHHHHHHHHHHhh
Q 015006 241 VAACLLKLGECRKSIEACNKVLDANPAH------VKGLYR-RGMAYM--ALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 241 ~a~~~~kl~~~~~A~~~~~~al~~dp~~------~ka~~r-~g~a~~--~l~~~~eA~~~~~~al~l 298 (414)
.+..++..++|-+|=+.++.+-.-.+.. .+++.+ +|.++. ..|+..-|...|.+|+..
T Consensus 38 ~~i~lFn~g~yfeaHEvLEe~W~~~~~~~~er~~lqGLIQ~lAvAl~H~~rgN~~GA~~ll~~Al~~ 104 (161)
T 2ijq_A 38 HGVRLYNSGEFHESHDCFEDEWYNYGRGNTESKFLHGMVQVAAGAYKHFDFEDDDGMRSLFRTSLQY 104 (161)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTTTTCSSSHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCchHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 5556677799999988888886655443 556666 555554 469999999999999873
No 392
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=25.71 E-value=1.5e+02 Score=29.13 Aligned_cols=48 Identities=17% Similarity=0.140 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHhCCC-----------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 251 CRKSIEACNKVLDANPA-----------HVKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~-----------~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
|+..+.+++.|+..-|. ..-|+--+|++|+.+++|++|+...++++..
T Consensus 174 y~~I~~DL~~A~~~Lp~~~~~~~~gr~tk~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 174 YAQSINDLEEALELIPETYVRDAKHKIDNEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHSCTTCCCSSTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccccCcccCCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 56677777777765542 2457778899999999999999999999875
No 393
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=24.90 E-value=1.9e+02 Score=20.60 Aligned_cols=20 Identities=15% Similarity=0.155 Sum_probs=10.5
Q ss_pred HHHHcCCHHHHHHHHHHHHh
Q 015006 278 AYMALGEFEEAQRDFEMMMK 297 (414)
Q Consensus 278 a~~~l~~~~eA~~~~~~al~ 297 (414)
-.-..|+|++|+..|..|++
T Consensus 22 ~~D~~g~y~eAl~~Y~~aie 41 (85)
T 2v6x_A 22 DLDTATQYEEAYTAYYNGLD 41 (85)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 34445566555555555544
No 394
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=24.55 E-value=70 Score=22.96 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
-...+|.=|..+|+|+.|+.+|+.++.
T Consensus 14 e~~k~ARe~Al~GnYdta~~yY~g~~~ 40 (78)
T 2rpa_A 14 ENVKLAREYALLGNYDSAMVYYQGVLD 40 (78)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHHHHHHHHHHHH
Confidence 345678888899999999999988864
No 395
>3mcx_A SUSD superfamily protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE GOL; 1.49A {Bacteroides thetaiotaomicron}
Probab=24.49 E-value=1.4e+02 Score=29.01 Aligned_cols=49 Identities=12% Similarity=0.168 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHhCCC--------cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Q 015006 251 CRKSIEACNKVLDANPA--------HVKGLYRRGMAYMALGEFEEAQRDFEMMMKVD 299 (414)
Q Consensus 251 ~~~A~~~~~~al~~dp~--------~~ka~~r~g~a~~~l~~~~eA~~~~~~al~l~ 299 (414)
|+..+.+++.|+.+-|. ..-|+--+|++|+.+++|++|+...++++...
T Consensus 176 y~~I~~DL~~A~~~L~~~~~~gr~tk~aa~allarvyL~~~~~~~A~~~a~~vi~~~ 232 (477)
T 3mcx_A 176 YEQVVSDMSNALSGLRQETSNGYINYWAAQALLSRVYLNMGEYQKAYDAATDVIKNN 232 (477)
T ss_dssp HHHHHHHHHHHGGGSCSSCCTTSCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhCcccccCCcCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCC
Confidence 66778888888776543 24577778999999999999999999998753
No 396
>2cwy_A Hypothetical protein TTHA0068; structural genomics, conserved hypothetical protein, NPPSFA; 1.85A {Thermus thermophilus} SCOP: a.246.2.1 PDB: 2cxd_A
Probab=22.80 E-value=1.5e+02 Score=21.93 Aligned_cols=62 Identities=16% Similarity=0.180 Sum_probs=33.1
Q ss_pred hhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 015006 191 VTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLD 263 (414)
Q Consensus 191 ~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~ 263 (414)
..|..+|..|+|-+|-+.++.+-.. .+. .+... +..-+..-.|..+.+.|++ |...+.+++.
T Consensus 6 ~~~~~lfn~g~~~eaHEvlE~~W~~----~~~--~~~~~---~qGLIq~Ava~~h~~~gn~--a~~ll~~a~~ 67 (94)
T 2cwy_A 6 EEVLGLWRAGRYYEVHEVLEPYWLK----ATG--EERRL---LQGVILLAAALHQRRLGRP--GLRNLRKAEA 67 (94)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH----CCH--HHHHH---HHHHHHHHHHHHHHHTTCC--CHHHHHHHHH
T ss_pred HHHHHHHhCCChHHHHHHHHHHHhh----CCC--chHHH---HHHHHHHHHHHHHHHcCcH--HHHHHHHHHH
Confidence 3566778888888888877776652 211 11111 1122333334444455665 6666666654
No 397
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=22.46 E-value=54 Score=26.58 Aligned_cols=46 Identities=20% Similarity=0.161 Sum_probs=38.0
Q ss_pred CCchhhhhHHHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCC
Q 015006 176 GLSFDGIMDEAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNP 221 (414)
Q Consensus 176 ~~~~~e~~~~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p 221 (414)
..++...+..|..+...|..+...|+++.|...|-+.+.++....|
T Consensus 30 ~i~l~~ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~Ip 75 (146)
T 2xze_A 30 DIPPRRYFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLP 75 (146)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcc
Confidence 3466777888999999999999999999999999998876643333
No 398
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=22.06 E-value=2.9e+02 Score=28.47 Aligned_cols=30 Identities=10% Similarity=0.103 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Q 015006 269 VKGLYRRGMAYMALGEFEEAQRDFEMMMKV 298 (414)
Q Consensus 269 ~ka~~r~g~a~~~l~~~~eA~~~~~~al~l 298 (414)
+.|+|+.|..+...+++-+|+..|+.|...
T Consensus 260 A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~ 289 (704)
T 2xs1_A 260 ANAEYHQSILAKQQYYFGEEIARLQHAAEL 289 (704)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhHHHhHHHHHHHHHHHHHHH
Confidence 456777788888889999999999888753
No 399
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=27.29 E-value=19 Score=37.18 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHH
Q 015006 237 LHLNVAACLLKLGECRKSIEACNKVLDANPAHVKGLYRRGMAYMALGEFEEA 288 (414)
Q Consensus 237 ~~~N~a~~~~kl~~~~~A~~~~~~al~~dp~~~ka~~r~g~a~~~l~~~~eA 288 (414)
....+|...+..|+|.-|++.++.++..+|+|..|..-+|.+|.++|.-.+.
T Consensus 463 ~~~~~a~~~~~~g~~~wa~~l~~~~~~a~p~~~~ar~l~a~~~~~l~~~~~~ 514 (668)
T 2yhe_A 463 AVLKQMRAAIDKGDYRWAVQLGNHLVFADPANKDARALQADAMEQLGYQTEN 514 (668)
Confidence 4556778888899999999999999999999999999999999999876554
No 400
>3lew_A SUSD-like carbohydrate binding protein; structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 1PE 2PE; 1.70A {Bacteroides vulgatus}
Probab=21.37 E-value=92 Score=30.58 Aligned_cols=31 Identities=13% Similarity=0.091 Sum_probs=26.7
Q ss_pred hhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 234 RNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 234 ~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
+..++.-+|.+|+-+++|.+|+..|++++..
T Consensus 202 k~aA~allArvyL~~~~~~~A~~~a~~vi~~ 232 (495)
T 3lew_A 202 NEVVLGILSRACLYARQWEKAKTYSDKLLAK 232 (495)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHhc
Confidence 3457777899999999999999999999864
No 401
>3otn_A SUSD superfamily protein; putative outer membrane protein, carbohydrate binding, structural genomics; HET: MSE; 1.95A {Parabacteroides distasonis}
Probab=21.28 E-value=3.6e+02 Score=26.05 Aligned_cols=48 Identities=8% Similarity=-0.045 Sum_probs=33.8
Q ss_pred HH-HHHHHHHHHHHh-CC--------CcHHHHHHHHHHHHHcC---------CHHHHHHHHHHHHhh
Q 015006 251 CR-KSIEACNKVLDA-NP--------AHVKGLYRRGMAYMALG---------EFEEAQRDFEMMMKV 298 (414)
Q Consensus 251 ~~-~A~~~~~~al~~-dp--------~~~ka~~r~g~a~~~l~---------~~~eA~~~~~~al~l 298 (414)
|+ ..+.+++.|+.. -| +..-|+--+|++|+.++ +|++|...+++++..
T Consensus 160 y~~~I~~DL~~A~~~~Lp~~~~~gr~tk~aA~allarvyL~~~~~~~~~~~~~~~~A~~~a~~vi~~ 226 (482)
T 3otn_A 160 YDEIIIPDLLEAEQSDLAFSDHTGRVSMGAVKALLADVYLTYAGYPLQGGKSYYAESAKRSLEVIKS 226 (482)
T ss_dssp HHHTHHHHHHHHHTSCCCSCCSSSCCCHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHcCCCCcCcCCcCcHHHHHHHHHHHHHHhCCCcccCcHHHHHHHHHHHHHHHcc
Confidence 55 566777778775 33 22456667788888777 788888888888763
No 402
>4b4t_S RPN3, 26S proteasome regulatory subunit RPN3; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=21.00 E-value=6.1e+02 Score=25.04 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=62.4
Q ss_pred HHHHHHhhhccccccccHHHHHHHHHHHHhhcccCCCCChHHHHHHhhhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Q 015006 185 EAEKIRVTGNRLFKEGKFELAKAKYEKVLRDFNHVNPQDDEEGKVFVGKRNLLHLNVAACLLKLGECRKSIEACNKVLDA 264 (414)
Q Consensus 185 ~a~~~k~~Gn~~fk~g~y~~A~~~Y~~al~~~~~~~p~~~~e~~~~~~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~ 264 (414)
.+.-+.-.|..++-+++|.+|..++..|++.++...... ..+..++--+-.|.+-+|+..+- .+-.
T Consensus 269 ~~rY~YY~GRI~a~q~~Y~eA~~~L~~A~rkap~~~~a~--------gfr~~a~K~lI~V~LLlG~iP~r------~lf~ 334 (523)
T 4b4t_S 269 EARYFFYLSKINAIQLDYSTANEYIIAAIRKAPHNSKSL--------GFLQQSNKLHCCIQLLMGDIPEL------SFFH 334 (523)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHTSSCSCSSSCS--------HHHHHHHHHHHHHHHHHTCCCCH------HHHT
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCcchhhh--------hHHHHHHHHHHhHHhhcCCCCCh------HHhh
Confidence 466666788999999999999999999998433211111 12233443445555556775541 1111
Q ss_pred CCCc---HHHHHHHHHHHHH--cCCHHHHHHHHHHHHhhCCCC
Q 015006 265 NPAH---VKGLYRRGMAYMA--LGEFEEAQRDFEMMMKVDKSS 302 (414)
Q Consensus 265 dp~~---~ka~~r~g~a~~~--l~~~~eA~~~~~~al~l~P~n 302 (414)
.+.. ...|+.+++|+.. +..|..+++.++..+..+...
T Consensus 335 q~~l~~~L~pY~~Lv~Avr~GdL~~F~~~L~~h~~~F~~Dgty 377 (523)
T 4b4t_S 335 QSNMQKSLLPYYHLTKAVKLGDLKKFTSTITKYKQLLLKDDTY 377 (523)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHHTTCT
T ss_pred chhHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhcceeccCChh
Confidence 2222 3447777777643 224667777777777777554
No 403
>3ebb_A Phospholipase A2-activating protein; armadillo repeat, structural genomics consortium, SGC, WD repeat, acetylation, ATP-binding; 1.90A {Homo sapiens}
Probab=20.86 E-value=1.7e+02 Score=26.76 Aligned_cols=51 Identities=16% Similarity=0.111 Sum_probs=35.4
Q ss_pred hhhhHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCcHHHHHHHHHHHHHc
Q 015006 232 GKRNLLHLNVAACLLKLGECRKSIEACNKVLDA--NPAHVKGLYRRGMAYMAL 282 (414)
Q Consensus 232 ~~~~~~~~N~a~~~~kl~~~~~A~~~~~~al~~--dp~~~ka~~r~g~a~~~l 282 (414)
-..+++++|+|....+..+.+++...+..+..+ ...+..+.||.-.|+-.+
T Consensus 209 iA~ATl~~NlAv~~~~~~~~~~~~~ll~~l~~il~~~~d~EalyR~LvALGtL 261 (304)
T 3ebb_A 209 IALATLALNYSVCFHKDHNIEGKAQCLSLISTILEVVQDLEATFRLLVALGTL 261 (304)
T ss_dssp HHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 344678999999999888877666655433222 345789999987776544
Done!