Query 015010
Match_columns 414
No_of_seqs 323 out of 1765
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 05:04:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015010.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015010hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2nyi_A Unknown protein; protei 99.7 1.3E-16 4.5E-21 145.0 13.3 158 110-319 5-163 (195)
2 2nyi_A Unknown protein; protei 99.7 4.6E-16 1.6E-20 141.4 14.0 153 247-411 5-160 (195)
3 1u8s_A Glycine cleavage system 99.6 9.8E-15 3.4E-19 132.2 17.6 156 110-319 6-166 (192)
4 1u8s_A Glycine cleavage system 99.6 2.5E-14 8.7E-19 129.5 17.5 136 247-394 6-148 (192)
5 3p96_A Phosphoserine phosphata 98.7 1.7E-06 5.7E-11 86.9 21.5 125 109-281 11-136 (415)
6 3p96_A Phosphoserine phosphata 98.5 9.2E-07 3.2E-11 88.8 14.7 154 20-183 12-167 (415)
7 2f06_A Conserved hypothetical 98.1 0.00038 1.3E-08 59.1 18.3 110 21-158 7-118 (144)
8 1zpv_A ACT domain protein; str 98.1 1.9E-05 6.5E-10 61.6 9.0 67 110-183 5-71 (91)
9 2f06_A Conserved hypothetical 98.0 0.00027 9.2E-09 60.0 16.4 100 248-373 7-106 (144)
10 1zpv_A ACT domain protein; str 97.8 0.00014 4.9E-09 56.5 9.9 66 20-85 5-70 (91)
11 2ko1_A CTR148A, GTP pyrophosph 97.8 0.00014 4.9E-09 55.9 9.3 63 110-179 5-67 (88)
12 2ko1_A CTR148A, GTP pyrophosph 97.7 0.00014 4.9E-09 55.9 8.7 62 247-315 5-66 (88)
13 3obi_A Formyltetrahydrofolate 97.4 0.00084 2.9E-08 63.9 10.6 69 109-182 5-74 (288)
14 3o1l_A Formyltetrahydrofolate 97.3 0.00096 3.3E-08 63.9 10.0 69 109-182 21-90 (302)
15 3nrb_A Formyltetrahydrofolate 97.3 0.0011 3.8E-08 63.1 10.3 67 109-182 6-73 (287)
16 2re1_A Aspartokinase, alpha an 97.3 0.0036 1.2E-07 54.6 12.9 108 246-374 24-139 (167)
17 2f1f_A Acetolactate synthase i 97.3 0.0011 3.9E-08 57.7 9.3 66 110-182 3-69 (164)
18 3l76_A Aspartokinase; alloster 97.2 0.098 3.3E-06 54.8 25.2 273 22-371 272-562 (600)
19 3lou_A Formyltetrahydrofolate 97.2 0.0012 4E-08 63.1 9.3 70 109-182 9-80 (292)
20 2dt9_A Aspartokinase; protein- 97.2 0.0033 1.1E-07 54.8 11.3 108 246-370 15-129 (167)
21 3n0v_A Formyltetrahydrofolate 97.1 0.0015 5.3E-08 62.0 9.6 69 109-183 7-76 (286)
22 2pc6_A Probable acetolactate s 97.0 0.0023 7.9E-08 55.7 8.8 66 110-182 4-70 (165)
23 2f1f_A Acetolactate synthase i 97.0 0.0026 8.8E-08 55.4 8.9 66 248-319 4-69 (164)
24 2dtj_A Aspartokinase; protein- 97.0 0.012 4.1E-07 51.8 13.3 108 246-374 14-131 (178)
25 2re1_A Aspartokinase, alpha an 97.0 0.0091 3.1E-07 51.9 12.2 109 109-277 24-136 (167)
26 3obi_A Formyltetrahydrofolate 96.9 0.041 1.4E-06 52.2 17.3 111 247-368 6-118 (288)
27 3o1l_A Formyltetrahydrofolate 96.8 0.051 1.8E-06 51.9 16.7 36 247-282 22-57 (302)
28 2pc6_A Probable acetolactate s 96.7 0.0041 1.4E-07 54.2 8.0 66 248-319 5-70 (165)
29 3n0v_A Formyltetrahydrofolate 96.7 0.052 1.8E-06 51.4 16.3 36 247-282 8-43 (286)
30 3lou_A Formyltetrahydrofolate 96.7 0.091 3.1E-06 49.9 17.4 36 247-282 10-45 (292)
31 3nrb_A Formyltetrahydrofolate 96.6 0.07 2.4E-06 50.5 16.4 107 247-366 7-115 (287)
32 2dtj_A Aspartokinase; protein- 96.6 0.14 4.7E-06 44.9 17.2 139 108-320 13-157 (178)
33 3l76_A Aspartokinase; alloster 96.4 0.26 8.8E-06 51.6 20.3 196 109-370 269-476 (600)
34 3s1t_A Aspartokinase; ACT doma 96.4 0.29 1E-05 42.9 17.8 113 109-282 15-132 (181)
35 2fgc_A Acetolactate synthase, 96.3 0.015 5.2E-07 51.6 8.7 66 110-182 29-95 (193)
36 2dt9_A Aspartokinase; protein- 96.1 0.09 3.1E-06 45.5 13.0 110 108-277 14-128 (167)
37 3s1t_A Aspartokinase; ACT doma 96.1 0.069 2.4E-06 47.0 12.1 109 247-371 16-131 (181)
38 1y7p_A Hypothetical protein AF 96.0 0.012 4.1E-07 53.1 6.9 50 110-160 4-57 (223)
39 2jhe_A Transcription regulator 96.0 0.0083 2.8E-07 52.1 5.5 34 341-374 2-35 (190)
40 2fgc_A Acetolactate synthase, 95.9 0.027 9.2E-07 50.0 8.4 66 248-319 30-95 (193)
41 1y7p_A Hypothetical protein AF 95.8 0.013 4.4E-07 52.9 5.8 35 341-375 6-40 (223)
42 4go7_X Aspartokinase; transfer 95.7 0.048 1.7E-06 48.9 9.4 112 246-370 34-149 (200)
43 2jhe_A Transcription regulator 95.5 0.06 2E-06 46.5 9.1 60 112-181 2-61 (190)
44 3ab4_A Aspartokinase; aspartat 94.7 1.7 5.9E-05 43.1 18.4 109 109-277 263-377 (421)
45 4go7_X Aspartokinase; transfer 94.5 0.32 1.1E-05 43.5 11.2 53 108-160 33-87 (200)
46 3ab4_A Aspartokinase; aspartat 94.3 0.18 6.2E-06 50.3 10.1 105 246-369 263-377 (421)
47 3c1m_A Probable aspartokinase; 93.3 1.2 4.3E-05 44.9 14.2 104 246-369 317-437 (473)
48 2qmx_A Prephenate dehydratase; 92.8 0.21 7E-06 47.2 7.0 54 341-398 202-255 (283)
49 3luy_A Probable chorismate mut 90.7 1.4 4.8E-05 42.3 10.4 53 247-301 206-261 (329)
50 3luy_A Probable chorismate mut 90.6 1.1 3.7E-05 43.1 9.6 48 347-398 216-263 (329)
51 3mwb_A Prephenate dehydratase; 90.5 0.52 1.8E-05 45.0 7.2 54 341-398 203-257 (313)
52 2qmx_A Prephenate dehydratase; 90.1 0.87 3E-05 42.9 8.3 53 247-301 200-253 (283)
53 1sc6_A PGDH, D-3-phosphoglycer 89.6 0.98 3.3E-05 44.8 8.6 50 109-160 330-379 (404)
54 1sc6_A PGDH, D-3-phosphoglycer 89.3 0.59 2E-05 46.4 6.7 60 341-408 333-393 (404)
55 2qmw_A PDT, prephenate dehydra 89.3 0.96 3.3E-05 42.2 7.7 49 341-393 188-239 (267)
56 1ygy_A PGDH, D-3-phosphoglycer 88.5 1.4 4.9E-05 45.1 9.2 53 244-296 451-503 (529)
57 3tvi_A Aspartokinase; structur 88.2 1.7 5.9E-05 43.6 9.3 104 246-371 297-409 (446)
58 1ygy_A PGDH, D-3-phosphoglycer 87.7 2.3 7.8E-05 43.6 10.2 61 109-174 453-514 (529)
59 3mwb_A Prephenate dehydratase; 87.4 1.7 5.7E-05 41.5 8.3 54 246-301 200-255 (313)
60 3k5p_A D-3-phosphoglycerate de 84.3 5.6 0.00019 39.4 10.6 51 107-159 340-390 (416)
61 2qmw_A PDT, prephenate dehydra 83.3 3.3 0.00011 38.5 7.9 51 246-298 185-239 (267)
62 3tvi_A Aspartokinase; structur 83.1 19 0.00066 35.8 14.1 32 246-277 373-407 (446)
63 2cdq_A Aspartokinase; aspartat 82.8 1.7 5.9E-05 44.3 6.3 107 246-370 340-453 (510)
64 3c1m_A Probable aspartokinase; 79.8 38 0.0013 33.9 15.0 115 109-276 317-436 (473)
65 3k5p_A D-3-phosphoglycerate de 79.0 3 0.0001 41.3 6.4 47 340-393 344-390 (416)
66 3mah_A Aspartokinase; aspartat 75.5 2.2 7.7E-05 36.0 3.8 98 246-370 17-120 (157)
67 3mtj_A Homoserine dehydrogenas 72.8 2.8 9.4E-05 42.0 4.2 33 338-370 358-390 (444)
68 1phz_A Protein (phenylalanine 68.0 10 0.00035 37.5 7.0 69 245-318 32-101 (429)
69 3mtj_A Homoserine dehydrogenas 66.2 5.4 0.00019 39.9 4.8 31 247-277 359-389 (444)
70 2cdq_A Aspartokinase; aspartat 63.4 1.2E+02 0.004 30.7 14.1 140 109-320 340-483 (510)
71 3r6a_A Uncharacterized protein 43.8 48 0.0016 26.7 6.3 39 353-398 76-114 (144)
72 3rri_A Glyoxalase/bleomycin re 41.4 32 0.0011 26.8 4.7 46 351-398 79-124 (135)
73 4g6x_A Glyoxalase/bleomycin re 38.8 39 0.0013 27.4 5.0 39 353-398 109-147 (155)
74 3kol_A Oxidoreductase, glyoxal 37.9 43 0.0015 26.5 5.1 39 353-398 109-147 (156)
75 2dnr_A Synaptojanin-1; RRM dom 36.7 46 0.0016 25.4 4.5 55 4-71 5-59 (91)
76 3g12_A Putative lactoylglutath 36.0 67 0.0023 25.0 5.9 47 341-398 69-116 (128)
77 1zhv_A Hypothetical protein AT 36.0 64 0.0022 26.4 5.7 34 246-281 61-97 (134)
78 3ewb_X 2-isopropylmalate synth 35.6 2.3E+02 0.0078 26.1 10.3 91 255-380 146-236 (293)
79 1phz_A Protein (phenylalanine 31.8 87 0.003 30.9 6.8 69 109-181 33-101 (429)
80 3r4q_A Lactoylglutathione lyas 29.6 39 0.0013 27.6 3.5 50 341-398 79-128 (160)
81 1ufw_A Synaptojanin 2; RNP dom 29.3 17 0.00059 28.1 1.0 56 4-71 13-68 (95)
82 3zw5_A Glyoxalase domain-conta 29.0 59 0.002 25.9 4.5 42 353-397 101-142 (147)
83 1ecs_A Bleomycin resistance pr 28.9 1E+02 0.0035 23.5 5.8 40 353-398 69-115 (126)
84 3ey7_A Biphenyl-2,3-DIOL 1,2-d 28.9 62 0.0021 24.7 4.5 42 353-398 84-126 (133)
85 2rbb_A Glyoxalase/bleomycin re 28.8 73 0.0025 25.0 5.0 40 353-398 89-128 (141)
86 3sk2_A EHPR; antibiotic resist 28.7 75 0.0026 24.6 5.0 48 342-397 76-126 (132)
87 3ble_A Citramalate synthase fr 28.5 3.1E+02 0.011 25.7 10.1 86 257-380 167-252 (337)
88 1zvp_A Hypothetical protein VC 28.4 1.4E+02 0.0048 24.3 6.5 35 245-281 69-106 (133)
89 3e5d_A Putative glyoxalase I; 27.7 82 0.0028 23.7 5.0 39 353-397 85-123 (127)
90 3rhe_A NAD-dependent benzaldeh 27.0 75 0.0026 25.6 4.8 49 342-398 71-119 (148)
91 3bqx_A Glyoxalase-related enzy 26.6 84 0.0029 25.0 5.0 40 353-398 83-122 (150)
92 3itw_A Protein TIOX; bleomycin 26.2 84 0.0029 24.4 4.9 47 342-398 72-118 (137)
93 1r9c_A Glutathione transferase 26.2 16 0.00054 29.0 0.3 55 353-413 79-138 (139)
94 2r6u_A Uncharacterized protein 26.2 84 0.0029 25.2 4.9 40 353-398 101-140 (148)
95 2a4x_A Mitomycin-binding prote 26.1 88 0.003 24.3 5.0 40 353-398 85-124 (138)
96 2qqz_A Glyoxalase family prote 25.9 44 0.0015 25.6 3.0 38 353-398 83-120 (126)
97 3huh_A Virulence protein STM31 24.4 57 0.002 26.0 3.5 42 353-398 97-139 (152)
98 2i7r_A Conserved domain protei 23.6 62 0.0021 24.4 3.4 39 353-397 74-112 (118)
99 3ghj_A Putative integron gene 23.6 66 0.0023 25.5 3.7 39 353-397 98-136 (141)
100 3mah_A Aspartokinase; aspartat 23.1 47 0.0016 27.6 2.8 33 109-141 17-51 (157)
101 1zhv_A Hypothetical protein AT 23.1 41 0.0014 27.6 2.3 26 347-374 73-98 (134)
102 2pjs_A AGR_C_3564P, uncharacte 22.9 69 0.0024 24.0 3.6 39 353-397 75-113 (119)
103 4gym_A Glyoxalase/bleomycin re 22.1 48 0.0016 26.5 2.6 40 352-398 90-129 (149)
104 2j0w_A Lysine-sensitive aspart 21.5 28 0.00097 34.6 1.2 104 246-369 307-417 (449)
105 1tdj_A Biosynthetic threonine 21.3 3.3E+02 0.011 27.4 9.1 132 21-159 339-482 (514)
106 1rwu_A Hypothetical UPF0250 pr 20.9 3E+02 0.01 21.4 8.6 63 106-177 32-98 (109)
107 1f9z_A Glyoxalase I; beta-alph 20.8 2.1E+02 0.0072 21.5 6.2 49 341-398 74-122 (135)
108 1zvp_A Hypothetical protein VC 20.7 51 0.0017 27.0 2.4 28 345-374 80-107 (133)
No 1
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.69 E-value=1.3e-16 Score=145.03 Aligned_cols=158 Identities=13% Similarity=0.115 Sum_probs=108.8
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHccccccc
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTLISC 189 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~~~~ 189 (414)
.++|+|+| +||||||++|+++|+++||||++|++++..+++++ .|.|..+.. ..+.++++|++.|..++.+..
T Consensus 5 ~~~ltv~~-~DrpGiva~vs~~La~~g~NI~da~q~~~~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~--- 77 (195)
T 2nyi_A 5 SFVVSVAG-SDRVGIVHDFSWALKNISANVESSRMACLGGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQISTR--- 77 (195)
T ss_dssp EEEEEEEE-ECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEEE---
T ss_pred EEEEEEEe-CCCCcHHHHHHHHHHHCCCCEEEEEeEEECCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhcC---
Confidence 67999999 99999999999999999999999999996766666 777865321 123355666555554332200
Q ss_pred cccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEecCcccHHHHHHHHHH
Q 015010 190 EIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQDHKGLIYDMMRTLK 269 (414)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~DrpGLL~~i~~~L~ 269 (414)
... .+. . .+ . ......++|+|.|+|||||+++|+++|+
T Consensus 78 ------~~~------------~~~------------~-------~~----~-~~~~~~~iltv~g~DrpGiva~Vt~~La 115 (195)
T 2nyi_A 78 ------RAS------------SVA------------E-------RH----V-SPDTREYELYVEGPDSEGIVEAVTAVLA 115 (195)
T ss_dssp ------ECC------------CC---------------------------C-CTTEEEEEEEEEEECCTTHHHHHHHHHH
T ss_pred ------CeE------------EEE------------e-------CC----c-CCCCcEEEEEEEeCCCcCHHHHHHHHHH
Confidence 000 000 0 00 0 2334568999999999999999999999
Q ss_pred hCCceEEeEEEEEeeCCCEEEEEEEEe-cCCCCCCChHHHHHHHHHHHHHH
Q 015010 270 DYNTQVSYGRFFAKPRGNCEVDLFIMQ-ADGKKIVDPSKQDALCSRLRMEL 319 (414)
Q Consensus 270 ~~~l~I~~A~I~t~t~g~~~~D~F~v~-~~g~~~~~~~~~~~l~~~L~~~l 319 (414)
++|+||.+++..+....++..+.|++. ..+.+ ++.. +.|++.|....
T Consensus 116 ~~g~nI~~~~~~t~~~~~~~~~~F~m~~~~~~~--~~~~-~~l~~~l~~~a 163 (195)
T 2nyi_A 116 KKGANIVELETETLPAPFAGFTLFRMGSRVAFP--FPLY-QEVVTALSRVE 163 (195)
T ss_dssp HTTCEEEEEEEEEEECSSTTCEEEEEEEEEEEE--GGGH-HHHHHHHHHHH
T ss_pred HcCCCEEEceeeecccccCCCCeEEEEEEEEcC--CCcc-HHHHHHHHHHH
Confidence 999999999998543124456888874 22222 2334 77888876544
No 2
>2nyi_A Unknown protein; protein structure initiative, PSI, center for eukaryotic structural genomics, CESG, structural genomics; 1.80A {Galdieria sulphuraria}
Probab=99.67 E-value=4.6e-16 Score=141.45 Aligned_cols=153 Identities=15% Similarity=0.101 Sum_probs=105.6
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC-cce
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRP-LRV 325 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~-~~~ 325 (414)
.++|+|+|+|||||+++|+++|+++|+||.+|++++. .|..+. .|.+...+. ..+.+++.|++.|...+... ...
T Consensus 5 ~~~ltv~~~DrpGiva~vs~~La~~g~NI~da~q~~~-~~~f~m-~~~v~~~~~--~~~~~~~~l~~~L~~~~~~~~~~~ 80 (195)
T 2nyi_A 5 SFVVSVAGSDRVGIVHDFSWALKNISANVESSRMACL-GGDFAM-IVLVSLNAK--DGKLIQSALESALPGFQISTRRAS 80 (195)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEE-EEEEEESSS--SSHHHHHHHHHHSTTCEEEEEECC
T ss_pred EEEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEeEEE-CCeEEE-EEEEEecCc--cchhHHHHHHHHHHHHHHhcCCeE
Confidence 4689999999999999999999999999999999964 554555 666652221 22334566666665433211 001
Q ss_pred eeecCCCCceeeeeeeEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeC--ceeeEEEEEEEEcCCCCCCCchHHH
Q 015010 326 AVVNRGPDAELLVANPVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIH--DREWEVYRILLDEADGNLEPRNKIE 403 (414)
Q Consensus 326 ~~~~~~~~~~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g--~~~~~~d~Fyv~d~~g~~l~~~~~~ 403 (414)
.+.. .....-.-..+|+|.|.|||||+++||.+|+++|+||..+++.| .+ ++ ..+.||++...+.+ +...
T Consensus 81 ~~~~-~~~~~~~~~~iltv~g~DrpGiva~Vt~~La~~g~nI~~~~~~t--~~~~~~--~~~~F~m~~~~~~~--~~~~- 152 (195)
T 2nyi_A 81 SVAE-RHVSPDTREYELYVEGPDSEGIVEAVTAVLAKKGANIVELETET--LPAPFA--GFTLFRMGSRVAFP--FPLY- 152 (195)
T ss_dssp CC-----CCTTEEEEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE--EECSST--TCEEEEEEEEEEEE--GGGH-
T ss_pred EEEe-CCcCCCCcEEEEEEEeCCCcCHHHHHHHHHHHcCCCEEEceeee--cccccC--CCCeEEEEEEEEcC--CCcc-
Confidence 0100 00000112358999999999999999999999999999999999 77 66 78999998765543 1223
Q ss_pred HHHHHHHc
Q 015010 404 DLVRKILM 411 (414)
Q Consensus 404 ~~i~~~L~ 411 (414)
+.|+++|.
T Consensus 153 ~~l~~~l~ 160 (195)
T 2nyi_A 153 QEVVTALS 160 (195)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555553
No 3
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.63 E-value=9.8e-15 Score=132.21 Aligned_cols=156 Identities=9% Similarity=0.057 Sum_probs=108.2
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHccccccc
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTLISC 189 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~~~~ 189 (414)
.+.|+|.| +||||++++|+++|+++|+||.++++++..+.+++ .|.|..+ ...+++|++.|..++....
T Consensus 6 ~~~itv~~-~DrpGiva~vt~~La~~g~NI~d~~~~~~~~~f~~-~~~v~~~------~~~~~~l~~~L~~~~~~~~--- 74 (192)
T 1u8s_A 6 HLVITAVG-TDRPGICNEVVRLVTQAGCNIIDSRIAMFGKEFTL-LMLISGS------PSNITRVETTLPLLGQQHD--- 74 (192)
T ss_dssp EEEEEEEE-ECCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEE-EEEEEEC------HHHHHHHHHHHHHHHHHHT---
T ss_pred EEEEEEEc-CCCCcHHHHHHHHHHHCCCCEEeeeeeecCCceEE-EEEEecC------CCCHHHHHHHHHHHHHhcC---
Confidence 57899999 99999999999999999999999999995544444 7878652 3467888888887663210
Q ss_pred cccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEecCcccHHHHHHHHHH
Q 015010 190 EIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQDHKGLIYDMMRTLK 269 (414)
Q Consensus 190 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~DrpGLL~~i~~~L~ 269 (414)
... .+. .. . .++ +..+...++|+|.|+||||++++|+.+|+
T Consensus 75 ------~~~------------~~~-~~---------~------~~~-----~~~~~~~~~l~v~~~D~~Gil~~v~~~l~ 115 (192)
T 1u8s_A 75 ------LIT------------MMK-RT---------S------PHD-----HQTHAYTVEVYVESDDKLGLTEKFTQFFA 115 (192)
T ss_dssp ------CEE------------EEE-EE---------C------CCC-----CCCCSEEEEEEEEESCCTTHHHHHHHHHH
T ss_pred ------CEE------------EEE-eC---------C------CCC-----CccCCceEEEEEEeCCCccHHHHHHHHHH
Confidence 011 011 00 0 000 23344568999999999999999999999
Q ss_pred hCCceEEeEEEEEeeCC----CEEEEEEEEe-cCCCCCCChHHHHHHHHHHHHHH
Q 015010 270 DYNTQVSYGRFFAKPRG----NCEVDLFIMQ-ADGKKIVDPSKQDALCSRLRMEL 319 (414)
Q Consensus 270 ~~~l~I~~A~I~t~t~g----~~~~D~F~v~-~~g~~~~~~~~~~~l~~~L~~~l 319 (414)
++|+||.+++..| .+ ++..+.|++. .-+.+ ++...+.|++.|.+..
T Consensus 116 ~~~~nI~~~~~~t--~~~~~~~~~~~~F~~~~~~~~~--~~~~~~~l~~~l~~~~ 166 (192)
T 1u8s_A 116 QRQIGMASLSAQT--ISKDKLHSEQNQFHIAISARVD--SGCNLMQLQEEFDALC 166 (192)
T ss_dssp HTTCCEEEEEEEE--EC--------CEEEEEEEEEEC--TTSCHHHHHHHHHHHH
T ss_pred HcCCcHHHhhhhc--ccCCccCCCCCEEEEEEEEeCC--CCCCHHHHHHHHHHHH
Confidence 9999999988884 44 2467888774 22211 1224567878776544
No 4
>1u8s_A Glycine cleavage system transcriptional repressor, putative; structural genomics, protein structure initiative (PSI), domain swapping; 2.45A {Vibrio cholerae} SCOP: d.58.18.5 d.58.18.5
Probab=99.60 E-value=2.5e-14 Score=129.49 Aligned_cols=136 Identities=13% Similarity=0.103 Sum_probs=98.0
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcC-Ccce
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLR-PLRV 325 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~-~~~~ 325 (414)
..+|+|+|+|||||+++|+++|+++|+||.++++++ +.| ...-.|.+... ....+.|++.|.+.... ....
T Consensus 6 ~~~itv~~~DrpGiva~vt~~La~~g~NI~d~~~~~-~~~-~f~~~~~v~~~------~~~~~~l~~~L~~~~~~~~~~~ 77 (192)
T 1u8s_A 6 HLVITAVGTDRPGICNEVVRLVTQAGCNIIDSRIAM-FGK-EFTLLMLISGS------PSNITRVETTLPLLGQQHDLIT 77 (192)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE-ETT-EEEEEEEEEEC------HHHHHHHHHHHHHHHHHHTCEE
T ss_pred EEEEEEEcCCCCcHHHHHHHHHHHCCCCEEeeeeee-cCC-ceEEEEEEecC------CCCHHHHHHHHHHHHHhcCCEE
Confidence 468999999999999999999999999999999986 355 43336666421 24567888888776531 1111
Q ss_pred eee--cCCCCceeeeeeeEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCc----eeeEEEEEEEEcCCC
Q 015010 326 AVV--NRGPDAELLVANPVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHD----REWEVYRILLDEADG 394 (414)
Q Consensus 326 ~~~--~~~~~~~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~----~~~~~d~Fyv~d~~g 394 (414)
.+. .+..+..-....+|+|.+.||||++++|+.+|+++|+||..++..| .++ + ..+.||++..-+
T Consensus 78 ~~~~~~~~~~~~~~~~~~l~v~~~D~~Gil~~v~~~l~~~~~nI~~~~~~t--~~~~~~~~--~~~~F~~~~~~~ 148 (192)
T 1u8s_A 78 MMKRTSPHDHQTHAYTVEVYVESDDKLGLTEKFTQFFAQRQIGMASLSAQT--ISKDKLHS--EQNQFHIAISAR 148 (192)
T ss_dssp EEEEECCCCCCCCSEEEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEE--EC----------CEEEEEEEEE
T ss_pred EEEeCCCCCCccCCceEEEEEEeCCCccHHHHHHHHHHHcCCcHHHhhhhc--ccCCccCC--CCCEEEEEEEEe
Confidence 111 1111111123458999999999999999999999999999999999 773 5 788999977543
No 5
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.69 E-value=1.7e-06 Score=86.92 Aligned_cols=125 Identities=17% Similarity=0.171 Sum_probs=86.0
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHcccccc
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTLIS 188 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~~~ 188 (414)
..+.|++.| +||||+.+.|+++|+++||||.+.+.++ .+|+..-...+..+.. ....+.|++.|.......
T Consensus 11 ~~~~lt~~g-~Dr~Giv~~vs~~l~~~~~nI~d~~q~~-~~~~f~~~~~~~~~~~----~~~~~~l~~~l~~~~~~~--- 81 (415)
T 3p96_A 11 VSVLITVTG-VDQPGVTATLFEVLSRHGVELLNVEQVV-IRHRLTLGVLVCCPAD----VADGPALRHDVEAAIRKV--- 81 (415)
T ss_dssp EEEEEEEEE-ECCTTHHHHHHHHHTTTTCEEEEEEEEE-ETTEEEEEEEEEECHH----HHTSHHHHHHHHHHHHHT---
T ss_pred CeEEEEEEc-CCCCCHHHHHHHHHHHCCCCEEEeeeEE-ECCEeEEEEEEEecCC----cCCHHHHHHHHHHHHHHc---
Confidence 468999999 9999999999999999999999999998 5666544444443110 112366777776643321
Q ss_pred ccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEecC-cccHHHHHHHH
Q 015010 189 CEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQD-HKGLIYDMMRT 267 (414)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~D-rpGLL~~i~~~ 267 (414)
+-++ +++.. .. .. ......+..+++.++| +||++.+|+.+
T Consensus 82 ------~~~~------------~~~~~----------~~----~~-------~~~~~~~~~~~llg~~~~~~~~~~i~~~ 122 (415)
T 3p96_A 82 ------GLDV------------SIERS----------DD----VP-------IIREPSTHTIFVLGRPITAAAFGAVARE 122 (415)
T ss_dssp ------TCEE------------EEEEC----------SS----SC-------SSCCCCSEEEEEEESSCCHHHHHHHHHH
T ss_pred ------CeEE------------EEEEC----------Cc----cc-------ccCCCCcEEEEEEeCCCCHHHHHHHHHH
Confidence 0111 00000 00 00 0123456789999999 99999999999
Q ss_pred HHhCCceEEeEEEE
Q 015010 268 LKDYNTQVSYGRFF 281 (414)
Q Consensus 268 L~~~~l~I~~A~I~ 281 (414)
++++|+||...+-.
T Consensus 123 l~~~~~Ni~~l~~~ 136 (415)
T 3p96_A 123 VAALGVNIDLIRGV 136 (415)
T ss_dssp HHHTTCEEEEEEEE
T ss_pred HHHcCCCccceeec
Confidence 99999999986655
No 6
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=98.54 E-value=9.2e-07 Score=88.80 Aligned_cols=154 Identities=12% Similarity=0.044 Sum_probs=102.7
Q ss_pred eeEEEEeCCCCCChhHHHHHHHHHcCcEEEEEEEEecCCEEEEEEEEEcCCC-CCHHHHHHHHHHhCCCCCcCCcccccc
Q 015010 20 CTVITVNCPDKTGLGCDLCRIILLFGLSISRGDLSKDGKWCYLVFWVVGKPT-TRWSLLKNRLLEVCPSYFSTSRIYSYR 98 (414)
Q Consensus 20 ~~~v~v~~~d~~Gll~~~~~vl~~~~L~I~~a~i~tdg~~~~d~f~v~~~~g-~~~~~l~~~l~~~~~~~~~~~~~~~~~ 98 (414)
..++++.||||+|+.+.++++|+++|.+|.+..-+..+|+|.-...+.-+.. .+.+.|+..|..++....-.-......
T Consensus 12 ~~~lt~~g~Dr~Giv~~vs~~l~~~~~nI~d~~q~~~~~~f~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 91 (415)
T 3p96_A 12 SVLITVTGVDQPGVTATLFEVLSRHGVELLNVEQVVIRHRLTLGVLVCCPADVADGPALRHDVEAAIRKVGLDVSIERSD 91 (415)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTTTCEEEEEEEEEETTEEEEEEEEEECHHHHTSHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred eEEEEEEcCCCCCHHHHHHHHHHHCCCCEEEeeeEEECCEeEEEEEEEecCCcCCHHHHHHHHHHHHHHcCeEEEEEECC
Confidence 4689999999999999999999999999999998888888766655543322 133456666665432210000000000
Q ss_pred cccccCCCCCCeEEEEEEEecC-CcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHH
Q 015010 99 LENQQQPKPPDVFLLKFWCFQD-RKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHH 177 (414)
Q Consensus 99 ~~~~~~~~~~~~~~i~v~~~~D-r~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~ 177 (414)
... ......+..+++.+ .+ ++|++.+|+.+++.+|.||.+.+..+......++ |.|..+. ...+.+++.
T Consensus 92 ~~~--~~~~~~~~~~~llg-~~~~~~~~~~i~~~l~~~~~Ni~~l~~~~~~~~~~~~-~~v~~~~------~~~~~l~~~ 161 (415)
T 3p96_A 92 DVP--IIREPSTHTIFVLG-RPITAAAFGAVAREVAALGVNIDLIRGVSDYPVIGLE-LRVSVPP------GADEALRTA 161 (415)
T ss_dssp SSC--SSCCCCSEEEEEEE-SSCCHHHHHHHHHHHHHTTCEEEEEEEEESSSSEEEE-EEEECCT------TCHHHHHHH
T ss_pred ccc--ccCCCCcEEEEEEe-CCCCHHHHHHHHHHHHHcCCCccceeeccCCCceEEE-EEeeCCC------CCHHHHHHH
Confidence 000 11234588999999 99 9999999999999999999988887733344443 6665421 223556666
Q ss_pred HHHHHc
Q 015010 178 LEAVLG 183 (414)
Q Consensus 178 L~~~l~ 183 (414)
+.+.+.
T Consensus 162 l~~l~~ 167 (415)
T 3p96_A 162 LNRVSS 167 (415)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 665543
No 7
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.07 E-value=0.00038 Score=59.14 Aligned_cols=110 Identities=12% Similarity=0.031 Sum_probs=78.6
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHcCcEEEEEEEE-e-cCCEEEEEEEEEcCCCCCHHHHHHHHHHhCCCCCcCCcccccc
Q 015010 21 TVITVNCPDKTGLGCDLCRIILLFGLSISRGDLS-K-DGKWCYLVFWVVGKPTTRWSLLKNRLLEVCPSYFSTSRIYSYR 98 (414)
Q Consensus 21 ~~v~v~~~d~~Gll~~~~~vl~~~~L~I~~a~i~-t-dg~~~~d~f~v~~~~g~~~~~l~~~l~~~~~~~~~~~~~~~~~ 98 (414)
..++|..||+||.++++.+.|++.|.+|..-.++ + |.| +-.|.+ .+.+..+..|....-.
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~~~~~~--~~~~~~-----~d~~~a~~~L~~~G~~----------- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAENADFG--ILRGIV-----SDPDKAYKALKDNHFA----------- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEECSSCE--EEEEEE-----SCHHHHHHHHHHTTCC-----------
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEecCCCC--EEEEEe-----CCHHHHHHHHHHcCCe-----------
Confidence 4688899999999999999999999999887665 3 433 223433 3556666666643210
Q ss_pred cccccCCCCCCeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEE
Q 015010 99 LENQQQPKPPDVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFI 158 (414)
Q Consensus 99 ~~~~~~~~~~~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V 158 (414)
.. ....+.+.. +|+||.+++++++|+++|+||.....+. .++....+|.+
T Consensus 69 v~--------~~svv~v~~-~d~pGvla~i~~~L~~~~InI~~~~~~~-~~~~~~~~i~~ 118 (144)
T 2f06_A 69 VN--------ITDVVGISC-PNVPGALAKVLGFLSAEGVFIEYMYSFA-NNNVANVVIRP 118 (144)
T ss_dssp EE--------EEEEEEEEE-ESSTTHHHHHHHHHHHTTCCEEEEEEEE-ETTEEEEEEEE
T ss_pred Ee--------eeeEEEEEe-CCCCcHHHHHHHHHHHCCCCEEEEEEEc-cCCcEEEEEEe
Confidence 00 124577788 9999999999999999999998766663 35555555555
No 8
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=98.06 E-value=1.9e-05 Score=61.64 Aligned_cols=67 Identities=15% Similarity=0.213 Sum_probs=51.8
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHc
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLG 183 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~ 183 (414)
.+.|++.+ +||||++++|+++|+++|+||.+....+. ++.+.-.+.+.-+ +...+++|.+.|++...
T Consensus 5 ~~~l~v~~-~DrpGila~vt~~la~~~~NI~~i~~~~~-~~~~~~~i~v~~~-----~~~~l~~l~~~L~~~~~ 71 (91)
T 1zpv_A 5 KAIITVVG-KDKSGIVAGVSGKIAELGLNIDDISQTVL-DEYFTMMAVVSSD-----EKQDFTYLRNEFEAFGQ 71 (91)
T ss_dssp EEEEEEEE-SCCTTHHHHHHHHHHHTTCEEEEEEEEEE-TTEEEEEEEEEES-----SCCCHHHHHHHHHHHHH
T ss_pred eEEEEEEE-CCCCCHHHHHHHHHHHcCCCEEEEEeEEE-cCEEEEEEEEEeC-----CCCCHHHHHHHHHHHHH
Confidence 57899999 99999999999999999999999999984 4765555656432 12245777777776543
No 9
>2f06_A Conserved hypothetical protein; structural genomics hypothetical protein, PSI, protein struc initiative; HET: MSE HIS; 2.10A {Bacteroides thetaiotaomicron} SCOP: d.58.18.11 d.58.18.11
Probab=98.02 E-value=0.00027 Score=60.04 Aligned_cols=100 Identities=13% Similarity=0.095 Sum_probs=66.8
Q ss_pred EEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceee
Q 015010 248 TLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVAV 327 (414)
Q Consensus 248 t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~ 327 (414)
..++|..+|+||.++++++.|++.|+||..-.+.. ..+.. ++.+. ..+++ ..++.|++. ...
T Consensus 7 ~~i~v~v~d~~G~l~~i~~~la~~~inI~~i~~~~--~~~~~--~~~~~-----~~d~~---~a~~~L~~~---G~~--- 68 (144)
T 2f06_A 7 KQLSIFLENKSGRLTEVTEVLAKENINLSALCIAE--NADFG--ILRGI-----VSDPD---KAYKALKDN---HFA--- 68 (144)
T ss_dssp EEEEEEECSSSSHHHHHHHHHHHTTCCEEEEEEEE--CSSCE--EEEEE-----ESCHH---HHHHHHHHT---TCC---
T ss_pred EEEEEEecCCCcHHHHHHHHHHHCCCCEEEEEEEe--cCCCC--EEEEE-----eCCHH---HHHHHHHHc---CCe---
Confidence 46888899999999999999999999999744331 21111 12222 12333 333444331 110
Q ss_pred ecCCCCceeeeeeeEEEEeCCccchHHHHHHHHHhCCceEEEEEEe
Q 015010 328 VNRGPDAELLVANPVELSGRGRPLVFYDITLALKILSISIFSVEIG 373 (414)
Q Consensus 328 ~~~~~~~~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~ 373 (414)
+.....+-+...|+||.+++|+++|++.|+||.+.-..
T Consensus 69 --------v~~~svv~v~~~d~pGvla~i~~~L~~~~InI~~~~~~ 106 (144)
T 2f06_A 69 --------VNITDVVGISCPNVPGALAKVLGFLSAEGVFIEYMYSF 106 (144)
T ss_dssp --------EEEEEEEEEEEESSTTHHHHHHHHHHHTTCCEEEEEEE
T ss_pred --------EeeeeEEEEEeCCCCcHHHHHHHHHHHCCCCEEEEEEE
Confidence 11123677778899999999999999999999766555
No 10
>1zpv_A ACT domain protein; structural genomics, PSI, protein structure INIT midwest center for structural genomics, MCSG, unknown funct; 1.90A {Streptococcus pneumoniae} SCOP: d.58.18.7
Probab=97.80 E-value=0.00014 Score=56.51 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=53.7
Q ss_pred eeEEEEeCCCCCChhHHHHHHHHHcCcEEEEEEEEecCCEEEEEEEEEcCCCCCHHHHHHHHHHhC
Q 015010 20 CTVITVNCPDKTGLGCDLCRIILLFGLSISRGDLSKDGKWCYLVFWVVGKPTTRWSLLKNRLLEVC 85 (414)
Q Consensus 20 ~~~v~v~~~d~~Gll~~~~~vl~~~~L~I~~a~i~tdg~~~~d~f~v~~~~g~~~~~l~~~l~~~~ 85 (414)
...++|.|+||||++++++++|+++|.+|.....++++|.+.-.+.+.-+...+.+.|...|..++
T Consensus 5 ~~~l~v~~~DrpGila~vt~~la~~~~NI~~i~~~~~~~~~~~~i~v~~~~~~~l~~l~~~L~~~~ 70 (91)
T 1zpv_A 5 KAIITVVGKDKSGIVAGVSGKIAELGLNIDDISQTVLDEYFTMMAVVSSDEKQDFTYLRNEFEAFG 70 (91)
T ss_dssp EEEEEEEESCCTTHHHHHHHHHHHTTCEEEEEEEEEETTEEEEEEEEEESSCCCHHHHHHHHHHHH
T ss_pred eEEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEeEEEcCEEEEEEEEEeCCCCCHHHHHHHHHHHH
Confidence 467999999999999999999999999999999987668888888775444445566666676554
No 11
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.76 E-value=0.00014 Score=55.91 Aligned_cols=63 Identities=14% Similarity=0.306 Sum_probs=46.8
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHH
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLE 179 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~ 179 (414)
.+.|.+.+ +||||+|++|+++|++.|+||.+..+.+. ++.+...|.+.. .+...++++.+.|+
T Consensus 5 ~~~l~v~~-~Dr~G~L~~I~~~la~~~inI~~i~~~~~-~~~~~~~i~v~~-----~~~~~l~~l~~~L~ 67 (88)
T 2ko1_A 5 LAGIRIVG-EDKNGMTNQITGVISKFDTNIRTIVLNAK-DGIFTCNLMIFV-----KNTDKLTTLMDKLR 67 (88)
T ss_dssp EEEEEEEE-ECCTTHHHHHHHHHTTSSSCEEEEEEEEC-SSEEEEEEEEEE-----SSHHHHHHHHHHHT
T ss_pred EEEEEEEE-ECCCcHHHHHHHHHHHCCCCeEEEEEEEc-CCEEEEEEEEEE-----CCHHHHHHHHHHHh
Confidence 46789999 99999999999999999999999999884 445555555543 23444455544443
No 12
>2ko1_A CTR148A, GTP pyrophosphokinase; homodimer, alpha+beta, transferase, structural genomics, PSI-2, protein structure initiative; NMR {Chlorobaculum tepidum} PDB: 3ibw_A
Probab=97.72 E-value=0.00014 Score=55.91 Aligned_cols=62 Identities=16% Similarity=0.265 Sum_probs=44.9
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHH
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRL 315 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L 315 (414)
.+.+.|.++||||+|++|+.+|++.|+||.+..+.+ .++.+...|.+.. .+.+.++++.+.|
T Consensus 5 ~~~l~v~~~Dr~G~L~~I~~~la~~~inI~~i~~~~--~~~~~~~~i~v~~-----~~~~~l~~l~~~L 66 (88)
T 2ko1_A 5 LAGIRIVGEDKNGMTNQITGVISKFDTNIRTIVLNA--KDGIFTCNLMIFV-----KNTDKLTTLMDKL 66 (88)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHTTSSSCEEEEEEEE--CSSEEEEEEEEEE-----SSHHHHHHHHHHH
T ss_pred EEEEEEEEECCCcHHHHHHHHHHHCCCCeEEEEEEE--cCCEEEEEEEEEE-----CCHHHHHHHHHHH
Confidence 357899999999999999999999999999977763 3335555555541 2344555555544
No 13
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=97.38 E-value=0.00084 Score=63.93 Aligned_cols=69 Identities=16% Similarity=0.225 Sum_probs=49.9
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEe-CCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVST-TPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVL 182 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T-~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l 182 (414)
..+.|++.| +||||+.++|++.|+++|+||.+.+.++ ...|++.-...+.-+.. ....++|++.|....
T Consensus 5 ~~~iLtv~g-~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~----~~~~~~L~~~f~~la 74 (288)
T 3obi_A 5 HQYVLTLSC-PDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAK----VIPLASLRTGFGVIA 74 (288)
T ss_dssp CEEEEEEEE-ECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSC----CCCHHHHHHHHHHHH
T ss_pred CeEEEEEEC-CCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCC----CCCHHHHHHHHHHHH
Confidence 357899999 9999999999999999999999999984 24666544444432211 113466777776543
No 14
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=97.30 E-value=0.00096 Score=63.90 Aligned_cols=69 Identities=16% Similarity=0.148 Sum_probs=50.2
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeC-CCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTT-PDGRVMDLFFITDTRELLHTRKRREETIHHLEAVL 182 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l 182 (414)
..+.|++.| +||||+.++|++.|+++|+||.+++.++. ..|++.-...+..+.. ....++|++.|....
T Consensus 21 ~~~iLtv~c-~DrpGIVa~VS~~La~~g~NI~d~~q~~d~~~g~FfMr~~~~~~~~----~~~~~~L~~~l~~la 90 (302)
T 3o1l_A 21 RTFRLVIAC-PDRVGIVAKVSNFLASHNGWITEASHHSDNLSGWFFMRHEIRADTL----PFDLDGFREAFTPIA 90 (302)
T ss_dssp CEEEEEEEE-ECCTTHHHHHHHHHHHTTCCEEEEEEEEETTTTEEEEEEEEEGGGS----SSCHHHHHHHHHHHH
T ss_pred ceEEEEEEC-CCCCCHHHHHHHHHHHCCCCEEEeeEEecCCCCeEEEEEEEecCCC----CCCHHHHHHHHHHHH
Confidence 468999999 99999999999999999999999999973 2566544444432211 113466777776543
No 15
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=97.29 E-value=0.0011 Score=63.08 Aligned_cols=67 Identities=13% Similarity=0.202 Sum_probs=47.9
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEe-CCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVST-TPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVL 182 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T-~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l 182 (414)
..+.|++.| +||||+.++|++.|+++|+||.+.+.++ ...|++.-...+..+. ...++|++.|....
T Consensus 6 ~~~vLtv~c-~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~------~~~~~L~~~f~~la 73 (287)
T 3nrb_A 6 NQYVLSLAC-QDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFMRVSVEIPV------AGVNDFNSAFGKVV 73 (287)
T ss_dssp TEEEEEEEE-ECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCC---------CHHHHHHHHHH
T ss_pred CeEEEEEEC-CCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEEEEEEEcCC------CCHHHHHHHHHHHH
Confidence 468999999 9999999999999999999999999984 2456554334343221 12346766666543
No 16
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=97.29 E-value=0.0036 Score=54.56 Aligned_cols=108 Identities=19% Similarity=0.164 Sum_probs=70.2
Q ss_pred CeEEEEEEe-cCcccHHHHHHHHHHhCCceEEeEEEEEee-CCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCc
Q 015010 246 SHTLIQILG-QDHKGLIYDMMRTLKDYNTQVSYGRFFAKP-RGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPL 323 (414)
Q Consensus 246 ~~t~v~V~~-~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t-~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~ 323 (414)
+.+.|+|.. +|+||.++++..+|+++|+||.. |.+.. .++...=.|++.. ...++..+.|++ +..++
T Consensus 24 ~~~~i~v~~~~~~~G~~~~if~~La~~~Invd~--i~~s~~~~g~~~isf~v~~--------~~~~~a~~~l~~-~~~~l 92 (167)
T 2re1_A 24 NQARINVRGVPDKPGVAYQILGAVADANIEVDM--IIQNVGSEGTTDFSFTVPR--------GDYKQTLEILSE-RQDSI 92 (167)
T ss_dssp CCEEEEEEEEECCTTHHHHHHHHHHTTTCCCCC--EEEC----CEEEEEEEECG--------GGHHHHHHHHHH-SSTTT
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCeEEE--EEcCCCCCCeeEEEEEEec--------hHHHHHHHHHHH-HHHHc
Confidence 456788884 99999999999999999999986 43211 1122333466642 112333344443 32222
Q ss_pred ceeeecCCCCceeee---eeeEEEEeCC---ccchHHHHHHHHHhCCceEEEEEEec
Q 015010 324 RVAVVNRGPDAELLV---ANPVELSGRG---RPLVFYDITLALKILSISIFSVEIGR 374 (414)
Q Consensus 324 ~~~~~~~~~~~~v~~---~~~lev~~~D---RpGLL~dIt~~l~~~gl~I~~A~I~T 374 (414)
.. ..+.. -..+.|.+.+ +||+++++..+|.+.|++|.. |+|
T Consensus 93 ~~--------~~i~~~~~~a~vsvvG~~m~~~~Gv~a~i~~aL~~~~InI~~--ist 139 (167)
T 2re1_A 93 GA--------ASIDGDDTVCKVSAVGLGMRSHVGVAAKIFRTLAEEGINIQM--IST 139 (167)
T ss_dssp TC--------SEEEEESSEEEEEEECSSCTTCCCHHHHHHHHHHHTTCCCCE--EEE
T ss_pred CC--------ceEEecCCEEEEEEECCCcCCCcCHHHHHHHHHHHCCCcEEE--EEc
Confidence 11 11111 1378888886 999999999999999999988 445
No 17
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.27 E-value=0.0011 Score=57.65 Aligned_cols=66 Identities=17% Similarity=0.176 Sum_probs=52.6
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCC-CeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPD-GRVMDLFFITDTRELLHTRKRREETIHHLEAVL 182 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~-g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l 182 (414)
...|.|.+ .||||+|++|+++|++.|+||.+..+.++.+ +...-+|.|.. +...+++|.++|.+..
T Consensus 3 ~~~IsV~v-~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~~------d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 3 RRILSVLL-ENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTVG------DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEE-ECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEES------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEE-eCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEec------cHHHHHHHHHHHcCCC
Confidence 35789999 9999999999999999999999999987564 66665677763 3556777777777643
No 18
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=97.22 E-value=0.098 Score=54.76 Aligned_cols=273 Identities=21% Similarity=0.248 Sum_probs=149.5
Q ss_pred EEEE-eCCCCCChhHHHHHHHHHcCcEEEEEEEE-ecCCEEEEEEEEEcCCCCCHHHHHHHHHHhCCCCCcCCccccccc
Q 015010 22 VITV-NCPDKTGLGCDLCRIILLFGLSISRGDLS-KDGKWCYLVFWVVGKPTTRWSLLKNRLLEVCPSYFSTSRIYSYRL 99 (414)
Q Consensus 22 ~v~v-~~~d~~Gll~~~~~vl~~~~L~I~~a~i~-tdg~~~~d~f~v~~~~g~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 99 (414)
.|++ ..++.+|.+.++-+.|++++++|---.-+ +.+|-.-..|.|.... .......++++............+ .
T Consensus 272 ~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~~---~~~a~~~l~~~~~el~~~~~~~~~-~ 347 (600)
T 3l76_A 272 KVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKDL---LNTAEAVTSAIAPALRSYPEADQE-A 347 (600)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGGG---HHHHHHHHHHHGGGGSSSTTCSSS-S
T ss_pred EEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHHH---HHHHHHHHHHHHHHhhccccccCc-c
Confidence 4444 34789999999999999999998333222 2444445566664331 112223333322111000000000 0
Q ss_pred ccccCCCCCCeEEEEEEEec---CCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHH
Q 015010 100 ENQQQPKPPDVFLLKFWCFQ---DRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIH 176 (414)
Q Consensus 100 ~~~~~~~~~~~~~i~v~~~~---Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~ 176 (414)
.+ .-..+...|.+.+ . .+||..+++..+|++.|+||.--. |+ ...+ .|.|.. +..++..+
T Consensus 348 ~v---~~~~~~a~VsvVG-~gm~~~~Gv~a~if~aL~~~~Ini~~is--tS--e~~I-s~vI~~--------~d~~~Av~ 410 (600)
T 3l76_A 348 EI---IVEKGIAKIAIAG-AGMIGRPGIAAKMFKTLADVGVNIEMIS--TS--EVKV-SCVIDQ--------RDADRAIA 410 (600)
T ss_dssp EE---EEECSEEEEEEEC-GGGTTCTTHHHHHHHHHHHTTCCCCEEE--EC--SSEE-EEEEEG--------GGHHHHHH
T ss_pred ee---EecCCeEEEEEEC-CCcccCccHHHHHHHHHHhCCCcEEEEe--cC--CCEE-EEEEcH--------HHHHHHHH
Confidence 11 0123578999998 6 689999999999999999997543 42 3333 355543 12334445
Q ss_pred HHHHHHccccccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEE-ec
Q 015010 177 HLEAVLGKTLISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQIL-GQ 255 (414)
Q Consensus 177 ~L~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~-~~ 255 (414)
.|.+.+.... . + .+.. ...+ ..+.-+-|..+. +.+.|+|. .+
T Consensus 411 aLh~~f~~~~-----t---~-----------~~~~-~~~~-------------~~~~v~Gia~~~----~~a~i~i~~~~ 453 (600)
T 3l76_A 411 ALSNAFGVTL-----S---P-----------PKNQ-TDTS-------------HLPAVRGVALDQ----DQAQIAIRHVP 453 (600)
T ss_dssp HHHHHTTCCB-----C---C-----------CCCC-CC----------------CCSCCEEEEEC----SEEEEEEEEEE
T ss_pred HHHHhhcccC-----C---C-----------cccc-cccc-------------ccCceEEEEeeC----CEEEEEEecCC
Confidence 5555553210 0 0 0000 0000 001112344432 44566664 58
Q ss_pred CcccHHHHHHHHHHhCCceEEeEEEEEe--eC---CC-EEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceeeec
Q 015010 256 DHKGLIYDMMRTLKDYNTQVSYGRFFAK--PR---GN-CEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVAVVN 329 (414)
Q Consensus 256 DrpGLL~~i~~~L~~~~l~I~~A~I~t~--t~---g~-~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~ 329 (414)
|+||+.++|-..|++.|+||.- |..+ .. |. ...=.|.+. .+..++..+.|++ +..++..
T Consensus 454 ~~~g~~~~if~~La~~~I~vDm--I~q~~~~~~~~g~~~~~isftv~--------~~d~~~a~~~l~~-~~~~~~~---- 518 (600)
T 3l76_A 454 DRPGMAAQLFTALAEANISVDM--IIQSQRCRINQGTPCRDIAFMVA--------EGDSSQAEAILQP-LIKDWLD---- 518 (600)
T ss_dssp SSTTHHHHHHHHHHHTTCCCCE--EEEEEECCCSSSSCEEEEEEEEE--------HHHHHHHHHHHHH-HTTTSTT----
T ss_pred CCccHHHHHHHHHHHcCCcEEE--EEecccccccCCCccceEEEEEe--------HHHHHHHHHHHHH-HHHhcCC----
Confidence 9999999999999999999964 3211 11 21 223346664 2233344444433 3222111
Q ss_pred CCCCceeeee---eeEEEEe---CCccchHHHHHHHHHhCCceEEEEE
Q 015010 330 RGPDAELLVA---NPVELSG---RGRPLVFYDITLALKILSISIFSVE 371 (414)
Q Consensus 330 ~~~~~~v~~~---~~lev~~---~DRpGLL~dIt~~l~~~gl~I~~A~ 371 (414)
.++.++ .+|.|.| ..+||+.+.+-++|.+.|+||..--
T Consensus 519 ----~~v~~~~~~akVSiVG~GM~~~~Gvaa~~f~aL~~~~Ini~mis 562 (600)
T 3l76_A 519 ----AAIVVNKAIAKVSIVGSGMIGHPGVAAHFFAALAQENINIEMIA 562 (600)
T ss_dssp ----CEEEEECCEEEEEEECGGGTTCTTHHHHHHHHHHTTTCCCCEEE
T ss_pred ----ceEEEeCCeEEEEEECcccccCccHHHHHHHHHHHCCCceEEEE
Confidence 112221 3777776 4899999999999999999998644
No 19
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=97.19 E-value=0.0012 Score=63.05 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=49.0
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeC-CCCeEEEEEEEecCCCCCCC-HHHHHHHHHHHHHHH
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTT-PDGRVMDLFFITDTRELLHT-RKRREETIHHLEAVL 182 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~-~~~~~~i~~~L~~~l 182 (414)
..+.|++.| +||||+.++|++.|+++|+||.+.+.++- ..|++.-...+..+. ++ ....++|++.|....
T Consensus 9 ~~~vLtv~c-~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~---~~~~~~~~~L~~~f~~la 80 (292)
T 3lou_A 9 HQFVLTLSC-PSAAGQVAAVVGLLDRHRCYVDELTVFDDDLSARFFVRCVFHATD---DADALRVDALRREFEPIA 80 (292)
T ss_dssp CEEEEEEEE-ESCSCHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEECC-------CCHHHHHHHHHHHH
T ss_pred CcEEEEEEc-CCCCCHHHHHHHHHHHCCCCEEeeEEEecCCCCceEEEEEEEccC---cccCCCHHHHHHHHHHHH
Confidence 468999999 99999999999999999999999999852 356544333333220 01 123566777776543
No 20
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=97.17 E-value=0.0033 Score=54.79 Aligned_cols=108 Identities=16% Similarity=0.188 Sum_probs=69.4
Q ss_pred CeEEEEEEe-cCcccHHHHHHHHHHhCCceEEeEEEEEeeC---CCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcC
Q 015010 246 SHTLIQILG-QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPR---GNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLR 321 (414)
Q Consensus 246 ~~t~v~V~~-~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~---g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~ 321 (414)
+.+.|+|.+ +|+||.++++..+|++.|+||.. |.+... .+...=.|.+..+ +.++..++.+.+...+.-
T Consensus 15 ~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~--I~q~~~~~~~g~~~isf~V~~~-----d~~~a~~~L~~~~~~~~~ 87 (167)
T 2dt9_A 15 DHAQIGLIGIPDQPGIAAKVFQALAERGIAVDM--IIQGVPGHDPSRQQMAFTVKKD-----FAQEALEALEPVLAEIGG 87 (167)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSC--EEBCCCCSCTTEEEEEEEEEGG-----GHHHHHHHHHHHHHHHCC
T ss_pred CEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEE--EEcCCCCCCCCceEEEEEEehH-----HHHHHHHHHHHHHHHhCC
Confidence 556777776 89999999999999999999986 542111 1133345677521 122223333334444432
Q ss_pred CcceeeecCCCCceeeeeeeEEEEeCC---ccchHHHHHHHHHhCCceEEEE
Q 015010 322 PLRVAVVNRGPDAELLVANPVELSGRG---RPLVFYDITLALKILSISIFSV 370 (414)
Q Consensus 322 ~~~~~~~~~~~~~~v~~~~~lev~~~D---RpGLL~dIt~~l~~~gl~I~~A 370 (414)
.+.. ..+ -.++.|.|.+ +||+++++.++|.+.|+||..-
T Consensus 88 --~v~~-~~~-------~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~i 129 (167)
T 2dt9_A 88 --EAIL-RPD-------IAKVSIVGVGLASTPEVPAKMFQAVASTGANIEMI 129 (167)
T ss_dssp --EEEE-ECS-------EEEEEEEESSGGGSTHHHHHHHHHHHHTTCCCCEE
T ss_pred --cEEE-eCC-------EEEEEEECCCcccCcCHHHHHHHHHHHCCCCEEEE
Confidence 2211 111 1378888876 9999999999999999999543
No 21
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=97.14 E-value=0.0015 Score=62.03 Aligned_cols=69 Identities=16% Similarity=0.095 Sum_probs=50.3
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeC-CCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHc
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTT-PDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLG 183 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~ 183 (414)
..+.|++.| +||||+.++|++.|+++|+||.+.+.++- ..|++.-...+..+. ....++|++.|.....
T Consensus 7 ~~~vLtv~c-~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~-----~~~~~~L~~~f~~la~ 76 (286)
T 3n0v_A 7 DTWILTADC-PSMLGTVDVVTRYLFEQRCYVTEHHSFDDRQSGRFFIRVEFRQPD-----DFDEAGFRAGLAERSE 76 (286)
T ss_dssp CCEEEEEEE-ECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEEEEEEECCS-----SCCHHHHHHHHHHHHG
T ss_pred CcEEEEEEe-CCCCCHHHHHHHHHHHCCCCeeeeeeeccCCCCeeEEEEEEecCC-----CCCHHHHHHHHHHHHH
Confidence 357899999 99999999999999999999999999852 356544344443321 1235677777776543
No 22
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=97.03 E-value=0.0023 Score=55.71 Aligned_cols=66 Identities=14% Similarity=0.219 Sum_probs=52.3
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCC-CeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPD-GRVMDLFFITDTRELLHTRKRREETIHHLEAVL 182 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~-g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l 182 (414)
...|.+.. .|+||+|++|+++|++.|+||.+..+..+.+ +..--+|.|.. +...+++|.++|.+..
T Consensus 4 ~~~IsV~v-eNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~~------d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 4 RHIISLLM-ENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTNG------PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEE-ECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEEE------CHHHHHHHHHHHHHST
T ss_pred EEEEEEEE-eCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEec------cHHHHHHHHHHhcCCC
Confidence 36789999 9999999999999999999999999986564 66665667764 3556677777777644
No 23
>2f1f_A Acetolactate synthase isozyme III small subunit; ferredoxin fold, ACT domain, transferase; HET: P33 1PE; 1.75A {Escherichia coli} SCOP: d.58.18.6 d.58.18.6
Probab=97.00 E-value=0.0026 Score=55.38 Aligned_cols=66 Identities=8% Similarity=0.088 Sum_probs=50.2
Q ss_pred EEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHH
Q 015010 248 TLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMEL 319 (414)
Q Consensus 248 t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l 319 (414)
..+.|...|+||+|++|++.|++.|+||.+..+..+.+.+...=+|.++ + ++..+++|.+.|.+..
T Consensus 4 ~~IsV~v~NrpGvLarIt~lfs~rg~NI~Sl~v~~t~d~~~sriti~V~--~----d~~~leqI~kqL~Kl~ 69 (164)
T 2f1f_A 4 RILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLSRMTIQTV--G----DEKVLEQIEKQLHKLV 69 (164)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCCCSEEEEEECSCSSEEEEEEEEE--S----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCCeeeceeeecCCCCEEEEEEEEe--c----cHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999998776433334555556665 2 2567788888887644
No 24
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.98 E-value=0.012 Score=51.76 Aligned_cols=108 Identities=19% Similarity=0.163 Sum_probs=68.1
Q ss_pred CeEEEEE-EecCcccHHHHHHHHHHhCCceEEeEEEEEeeC---CCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcC
Q 015010 246 SHTLIQI-LGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPR---GNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLR 321 (414)
Q Consensus 246 ~~t~v~V-~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~---g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~ 321 (414)
+.+.|+| ..+|+||.++++...|++.|+||.. |.+++. ++...=.|.+.. +..++..+.|++ +..
T Consensus 14 ~~~~Itv~~~~~~~G~~a~if~~La~~~InId~--i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~-~~~ 82 (178)
T 2dtj_A 14 SEAKVTVLGISDKPGEAAKVFRALADAEINIDM--VLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKK-LQV 82 (178)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCE--EEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHT-TTT
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCCEEE--EEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHH-HHH
Confidence 4567777 3699999999999999999999985 432211 112222366641 222333344433 222
Q ss_pred CcceeeecCCCCceeeee---eeEEEEeC---CccchHHHHHHHHHhCCceEEEEEEec
Q 015010 322 PLRVAVVNRGPDAELLVA---NPVELSGR---GRPLVFYDITLALKILSISIFSVEIGR 374 (414)
Q Consensus 322 ~~~~~~~~~~~~~~v~~~---~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~A~I~T 374 (414)
+... ..+.+. .+|.|.|. ++||+++++.++|.+.|+||.. |+|
T Consensus 83 ~~~~--------~~v~~~~~~a~VsvVG~gm~~~~Gv~arif~aLa~~~InI~~--ist 131 (178)
T 2dtj_A 83 QGNW--------TNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL--IST 131 (178)
T ss_dssp TTTC--------SEEEEESCEEEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCE--EEE
T ss_pred hcCC--------CeEEEeCCeEEEEEEcCCcccCccHHHHHHHHHHHCCCCEEE--EEc
Confidence 2111 112221 36677765 8999999999999999999988 445
No 25
>2re1_A Aspartokinase, alpha and beta subunits; structural genomics, protein structure initiative, midwest center for structural genomics; 2.75A {Neisseria meningitidis MC58}
Probab=96.97 E-value=0.0091 Score=51.93 Aligned_cols=109 Identities=16% Similarity=0.249 Sum_probs=72.1
Q ss_pred CeEEEEEE-EecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHccccc
Q 015010 109 DVFLLKFW-CFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTLI 187 (414)
Q Consensus 109 ~~~~i~v~-~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~~ 187 (414)
+...|+|. . +|+||.+++|..+|+++|+||.--....+.+|..--.|.|... +. ++..+.|++...
T Consensus 24 ~~~~i~v~~~-~~~~G~~~~if~~La~~~Invd~i~~s~~~~g~~~isf~v~~~-----~~---~~a~~~l~~~~~---- 90 (167)
T 2re1_A 24 NQARINVRGV-PDKPGVAYQILGAVADANIEVDMIIQNVGSEGTTDFSFTVPRG-----DY---KQTLEILSERQD---- 90 (167)
T ss_dssp CCEEEEEEEE-ECCTTHHHHHHHHHHTTTCCCCCEEEC----CEEEEEEEECGG-----GH---HHHHHHHHHSST----
T ss_pred CEEEEEEecC-CCCcCHHHHHHHHHHHcCCeEEEEEcCCCCCCeeEEEEEEech-----HH---HHHHHHHHHHHH----
Confidence 57888888 6 9999999999999999999998655443334533335766531 11 223233333111
Q ss_pred cccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEecC---cccHHHHH
Q 015010 188 SCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQD---HKGLIYDM 264 (414)
Q Consensus 188 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~D---rpGLL~~i 264 (414)
+. .. ..+.+. .+.+.+.|.+.+ +||+++++
T Consensus 91 ---------~l---------------------------------~~-~~i~~~----~~~a~vsvvG~~m~~~~Gv~a~i 123 (167)
T 2re1_A 91 ---------SI---------------------------------GA-ASIDGD----DTVCKVSAVGLGMRSHVGVAAKI 123 (167)
T ss_dssp ---------TT---------------------------------TC-SEEEEE----SSEEEEEEECSSCTTCCCHHHHH
T ss_pred ---------Hc---------------------------------CC-ceEEec----CCEEEEEEECCCcCCCcCHHHHH
Confidence 00 00 012222 356789999987 99999999
Q ss_pred HHHHHhCCceEEe
Q 015010 265 MRTLKDYNTQVSY 277 (414)
Q Consensus 265 ~~~L~~~~l~I~~ 277 (414)
..+|++.|+||..
T Consensus 124 ~~aL~~~~InI~~ 136 (167)
T 2re1_A 124 FRTLAEEGINIQM 136 (167)
T ss_dssp HHHHHHTTCCCCE
T ss_pred HHHHHHCCCcEEE
Confidence 9999999999997
No 26
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=96.93 E-value=0.041 Score=52.21 Aligned_cols=111 Identities=11% Similarity=0.146 Sum_probs=65.0
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCccee
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVA 326 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~ 326 (414)
..+++|.|+||||+.++|+++|+++|+||.+.+-++....+...-...++...... ..+.|++.|.. +..+..++
T Consensus 6 ~~iLtv~g~DrpGIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffmr~~~~~~~~~~----~~~~L~~~f~~-la~~~~m~ 80 (288)
T 3obi_A 6 QYVLTLSCPDRAGIVSAVSTFLFENGQNILDAQQYNDTESGHFFMRVVFNAAAKVI----PLASLRTGFGV-IAAKFTMG 80 (288)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTEEEEEEEEEEETTTTEEEEEEEEEESSCCC----CHHHHHHHHHH-HHHHTTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCcEEeeeeeecCCCCceEEEEEEEcCCCCC----CHHHHHHHHHH-HHHHcCCE
Confidence 36899999999999999999999999999997776433333332222223111111 24567776643 22222221
Q ss_pred --eecCCCCceeeeeeeEEEEeCCccchHHHHHHHHHhCCceEE
Q 015010 327 --VVNRGPDAELLVANPVELSGRGRPLVFYDITLALKILSISIF 368 (414)
Q Consensus 327 --~~~~~~~~~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~ 368 (414)
+.....+. .|=|....+---|.+|-.+.++-.+++.
T Consensus 81 ~~l~~~~~~~------ri~vl~Sg~g~nl~~ll~~~~~g~l~~~ 118 (288)
T 3obi_A 81 WHMRDRETRR------KVMLLVSQSDHCLADILYRWRVGDLHMI 118 (288)
T ss_dssp EEEEETTSCE------EEEEEECSCCHHHHHHHHHHHTTSSCEE
T ss_pred EEeeccCCCc------EEEEEEcCCCCCHHHHHHHHHCCCCCeE
Confidence 22211111 3444444445577777777776666543
No 27
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=96.78 E-value=0.051 Score=51.85 Aligned_cols=36 Identities=14% Similarity=0.140 Sum_probs=32.9
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEE
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFA 282 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t 282 (414)
..+++|.|+||||+.++|++.|+++|+||.+..-++
T Consensus 22 ~~iLtv~c~DrpGIVa~VS~~La~~g~NI~d~~q~~ 57 (302)
T 3o1l_A 22 TFRLVIACPDRVGIVAKVSNFLASHNGWITEASHHS 57 (302)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEEeeEEe
Confidence 358999999999999999999999999999977764
No 28
>2pc6_A Probable acetolactate synthase isozyme III (small; regulatory subunit, structural genomi protein structure initiative; HET: MSE; 2.50A {Nitrosomonas europaea atcc 19718} SCOP: d.58.18.6 d.58.18.6
Probab=96.74 E-value=0.0041 Score=54.16 Aligned_cols=66 Identities=8% Similarity=0.101 Sum_probs=50.1
Q ss_pred EEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHH
Q 015010 248 TLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMEL 319 (414)
Q Consensus 248 t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l 319 (414)
..+.|...|+||+|++|++.|++.|+||.+..+..+.+.+...=+|.++ + ++..+++|.+.|.+..
T Consensus 5 ~~IsV~veNrpGvL~rI~~lfs~rg~NI~Sl~v~~t~d~g~sritivV~--~----d~~~leql~kQL~Kl~ 70 (165)
T 2pc6_A 5 HIISLLMENEAGALSRVAGLFSARGYNIESLSVAPTEDPTLSRMTLVTN--G----PDEIVEQITKQLNKLI 70 (165)
T ss_dssp EEEEEEEECSTTHHHHHHHHHHHHTCCCCEEEEEECSSTTEEEEEEEEE--E----CHHHHHHHHHHHHHST
T ss_pred EEEEEEEeCCCcHHHHHHHHHHHCCCcEEEEEEEecCCCCEEEEEEEEe--c----cHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999997776433334555556664 1 2466788888887654
No 29
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=96.73 E-value=0.052 Score=51.42 Aligned_cols=36 Identities=14% Similarity=0.035 Sum_probs=32.9
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEE
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFA 282 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t 282 (414)
..+++|.|+||||+.++|++.|+++|+||.+.+-++
T Consensus 8 ~~vLtv~c~DrpGIVa~Vs~~La~~g~NI~d~~q~~ 43 (286)
T 3n0v_A 8 TWILTADCPSMLGTVDVVTRYLFEQRCYVTEHHSFD 43 (286)
T ss_dssp CEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cEEEEEEeCCCCCHHHHHHHHHHHCCCCeeeeeeec
Confidence 368999999999999999999999999999977664
No 30
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=96.66 E-value=0.091 Score=49.89 Aligned_cols=36 Identities=11% Similarity=0.108 Sum_probs=33.0
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEE
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFA 282 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t 282 (414)
..++++.|+||||+.++|+++|+++|+||.+.+-++
T Consensus 10 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~ 45 (292)
T 3lou_A 10 QFVLTLSCPSAAGQVAAVVGLLDRHRCYVDELTVFD 45 (292)
T ss_dssp EEEEEEEEESCSCHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cEEEEEEcCCCCCHHHHHHHHHHHCCCCEEeeEEEe
Confidence 468999999999999999999999999999977764
No 31
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=96.63 E-value=0.07 Score=50.55 Aligned_cols=107 Identities=8% Similarity=0.054 Sum_probs=62.3
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCccee
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVA 326 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~ 326 (414)
..+++|.|+||||+.++|++.|+++|+||.+..-++....+...- .+..+.... ..+.|++.|.. +..+..++
T Consensus 7 ~~vLtv~c~Dr~GIVa~Vs~~La~~g~NI~d~~q~~d~~~g~Ffm--r~~~~~~~~----~~~~L~~~f~~-la~~~~m~ 79 (287)
T 3nrb_A 7 QYVLSLACQDAPGIVSEVSTFLFNNGANIVEAEQFNDEDSSKFFM--RVSVEIPVA----GVNDFNSAFGK-VVEKYNAE 79 (287)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHHTTCEEEEEEEEEETTTTEEEE--EEEEECCC-------CHHHHHHHH-HHGGGTCE
T ss_pred eEEEEEECCCCCCHHHHHHHHHHHCCCCEEeeeeeecCCCCeEEE--EEEEEcCCC----CHHHHHHHHHH-HHHHcCCe
Confidence 468999999999999999999999999999987764333333221 122111111 13367676643 33333222
Q ss_pred --eecCCCCceeeeeeeEEEEeCCccchHHHHHHHHHhCCce
Q 015010 327 --VVNRGPDAELLVANPVELSGRGRPLVFYDITLALKILSIS 366 (414)
Q Consensus 327 --~~~~~~~~~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~ 366 (414)
+.....+. .|=|....+---|.++-...++-.++
T Consensus 80 ~~l~~~~~~~------ri~vl~Sg~g~nl~~ll~~~~~g~l~ 115 (287)
T 3nrb_A 80 WWFRPRTDRK------KVVIMVSKFDHCLGDLLYRHRLGELD 115 (287)
T ss_dssp EEEEETTCCC------EEEEEECSCCHHHHHHHHHHHHTSSC
T ss_pred eEeeccCCCc------EEEEEEeCCCcCHHHHHHHHHCCCCC
Confidence 22111111 34444444445777887777766554
No 32
>2dtj_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; HET: CIT; 1.58A {Corynebacterium glutamicum} PDB: 3aaw_B* 3ab2_B 3ab4_B*
Probab=96.61 E-value=0.14 Score=44.86 Aligned_cols=139 Identities=16% Similarity=0.203 Sum_probs=83.9
Q ss_pred CCeEEEEEE-EecCCcchHHHHHHHHHhCCCeEEEEEEEeCC--CCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHcc
Q 015010 108 PDVFLLKFW-CFQDRKGLLHDVTEVLCELELTIKRVKVSTTP--DGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGK 184 (414)
Q Consensus 108 ~~~~~i~v~-~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~ 184 (414)
.+.+.|+|. . +|+||.+++|...|++.|+||.--...+.. ++..--.|.+.. ...++..+.|++...
T Consensus 13 ~~~~~Itv~~~-~~~~G~~a~if~~La~~~InId~i~~s~~~~~~~~~~isf~v~~--------~d~~~a~~~l~~~~~- 82 (178)
T 2dtj_A 13 KSEAKVTVLGI-SDKPGEAAKVFRALADAEINIDMVLQNVSSVEDGTTDITFTCPR--------SDGRRAMEILKKLQV- 82 (178)
T ss_dssp CSEEEEEEEEE-ECSTTHHHHHHHHHHHTTCCCCEEEECCCCTTTCEEEEEEEEEH--------HHHHHHHHHHHTTTT-
T ss_pred CCEEEEEEecC-CCCccHHHHHHHHHHHcCCCEEEEEcCCCCCCCCceEEEEEEcc--------ccHHHHHHHHHHHHH-
Confidence 357888885 6 999999999999999999999865544421 332222366643 122223222222110
Q ss_pred ccccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEec---CcccHH
Q 015010 185 TLISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQ---DHKGLI 261 (414)
Q Consensus 185 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpGLL 261 (414)
+. .. ..+.+. .+...|.|.+. ++||++
T Consensus 83 ------------~~---------------------------------~~-~~v~~~----~~~a~VsvVG~gm~~~~Gv~ 112 (178)
T 2dtj_A 83 ------------QG---------------------------------NW-TNVLYD----DQVGKVSLVGAGMKSHPGVT 112 (178)
T ss_dssp ------------TT---------------------------------TC-SEEEEE----SCEEEEEEEEECCTTCHHHH
T ss_pred ------------hc---------------------------------CC-CeEEEe----CCeEEEEEEcCCcccCccHH
Confidence 00 00 122232 35677888886 899999
Q ss_pred HHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHc
Q 015010 262 YDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELL 320 (414)
Q Consensus 262 ~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~ 320 (414)
+++..+|++.|+||.. |.++ .- --.|.|. ++..++..+.|.+++.
T Consensus 113 arif~aLa~~~InI~~--istS-e~---~Is~vV~--------~~d~~~Av~~Lh~~F~ 157 (178)
T 2dtj_A 113 AEFMEALRDVNVNIEL--ISTS-EI---RISVLIR--------EDDLDAAARALHEQFQ 157 (178)
T ss_dssp HHHHHHHHHTTCCCCE--EEEE-TT---EEEEEEE--------GGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCCEEE--EEcC-CC---eEEEEEe--------HHHHHHHHHHHHHHHc
Confidence 9999999999999986 5433 22 2245553 2334445555666664
No 33
>3l76_A Aspartokinase; allostery, ACT domains, kinase transferase; HET: LYS; 2.54A {Synechocystis}
Probab=96.37 E-value=0.26 Score=51.56 Aligned_cols=196 Identities=15% Similarity=0.138 Sum_probs=111.5
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHcccccc
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTLIS 188 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~~~ 188 (414)
+.+.|++..-+++||.+++|...|+++|+||---......+|..--.|.|... ..++..+.|++....
T Consensus 269 ~~~~i~i~~~~~~~g~~~~if~~La~~~I~Vd~I~qs~~~~~~~~Isftv~~~--------~~~~a~~~l~~~~~e---- 336 (600)
T 3l76_A 269 DQAKVALLRVPDRPGVASKLFRDIAQQQVDIDLIIQSIHDGNSNDIAFTVVKD--------LLNTAEAVTSAIAPA---- 336 (600)
T ss_dssp CCEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEEBCCCBTTEEEEEEEECGG--------GHHHHHHHHHHHGGG----
T ss_pred CEEEEEEeCCCCcccHHHHHHHHHHHcCCCEEEEEeeccCCCCceEEEEEeHH--------HHHHHHHHHHHHHHH----
Confidence 44566665448999999999999999999995322222234544345666542 222332333332111
Q ss_pred ccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEec---CcccHHHHHH
Q 015010 189 CEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQ---DHKGLIYDMM 265 (414)
Q Consensus 189 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpGLL~~i~ 265 (414)
+ ... +. ......|.+. .+...|.|.+. .+||+.+++.
T Consensus 337 ---------l--------------~~~----------~~---~~~~~~v~~~----~~~a~VsvVG~gm~~~~Gv~a~if 376 (600)
T 3l76_A 337 ---------L--------------RSY----------PE---ADQEAEIIVE----KGIAKIAIAGAGMIGRPGIAAKMF 376 (600)
T ss_dssp ---------G--------------SSS----------TT---CSSSSEEEEE----CSEEEEEEECGGGTTCTTHHHHHH
T ss_pred ---------h--------------hcc----------cc---ccCcceeEec----CCeEEEEEECCCcccCccHHHHHH
Confidence 0 000 00 0001133333 35678999886 6899999999
Q ss_pred HHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceeeecCC-----CCceeeee-
Q 015010 266 RTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVAVVNRG-----PDAELLVA- 339 (414)
Q Consensus 266 ~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~~~-----~~~~v~~~- 339 (414)
.+|++.++||.. |+++ . .--.|.++ ++..++..+.|.+.+...........+ .-+-|..+
T Consensus 377 ~aL~~~~Ini~~--istS--e--~~Is~vI~--------~~d~~~Av~aLh~~f~~~~t~~~~~~~~~~~~~v~Gia~~~ 442 (600)
T 3l76_A 377 KTLADVGVNIEM--ISTS--E--VKVSCVID--------QRDADRAIAALSNAFGVTLSPPKNQTDTSHLPAVRGVALDQ 442 (600)
T ss_dssp HHHHHTTCCCCE--EEEC--S--SEEEEEEE--------GGGHHHHHHHHHHHTTCCBCCCCCCCC---CCSCCEEEEEC
T ss_pred HHHHhCCCcEEE--EecC--C--CEEEEEEc--------HHHHHHHHHHHHHhhcccCCCccccccccccCceEEEEeeC
Confidence 999999999985 5432 2 22345554 223445556666666533110000000 00112221
Q ss_pred --eeEEEE-eCCccchHHHHHHHHHhCCceEEEE
Q 015010 340 --NPVELS-GRGRPLVFYDITLALKILSISIFSV 370 (414)
Q Consensus 340 --~~lev~-~~DRpGLL~dIt~~l~~~gl~I~~A 370 (414)
..|.|. -.|+||+.++|-..|.+.|+||-.-
T Consensus 443 ~~a~i~i~~~~~~~g~~~~if~~La~~~I~vDmI 476 (600)
T 3l76_A 443 DQAQIAIRHVPDRPGMAAQLFTALAEANISVDMI 476 (600)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCEE
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHcCCcEEEE
Confidence 244443 4799999999999999999998543
No 34
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.37 E-value=0.29 Score=42.92 Aligned_cols=113 Identities=12% Similarity=0.192 Sum_probs=72.4
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCC--CCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHcccc
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTP--DGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTL 186 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~ 186 (414)
+.+.|+|.+-+|+||.+++|..+|++.|+||.--...... +|..--.|.|... +. ++..+.|++....
T Consensus 15 ~~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~I~q~~s~~~~g~~~isftv~~~-----~~---~~a~~~L~~~~~e-- 84 (181)
T 3s1t_A 15 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSRD-----VG---PAAVEKLDSLRNE-- 84 (181)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCCCEEECCCCTTTCEEEEEEEEETT-----TH---HHHHHHHHHTHHH--
T ss_pred CEEEEEEecCCCCcCHHHHHHHHHHHcCCcEEEEEecCCcccCCccEEEEEEehh-----HH---HHHHHHHHHHHHh--
Confidence 5667777654899999999999999999999743332222 4554445777652 12 2222223221110
Q ss_pred ccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEec---CcccHHHH
Q 015010 187 ISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQ---DHKGLIYD 263 (414)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpGLL~~ 263 (414)
.. ...|.++ .+...|.|.+. ++||+.++
T Consensus 85 -----------------------------l~----------------~~~v~~~----~~va~VsvVG~gm~~~~Gvaa~ 115 (181)
T 3s1t_A 85 -----------------------------IG----------------FSQLLYD----DHIGKVSLIGAGMRSHPGVTAT 115 (181)
T ss_dssp -----------------------------HC----------------CSEEEEE----SCEEEEEEEEECCTTCHHHHHH
T ss_pred -----------------------------cC----------------cceEEEe----CCEEEEEEEecccccCchHHHH
Confidence 00 0012222 24567888775 89999999
Q ss_pred HHHHHHhCCceEEeEEEEE
Q 015010 264 MMRTLKDYNTQVSYGRFFA 282 (414)
Q Consensus 264 i~~~L~~~~l~I~~A~I~t 282 (414)
+..+|++.|+||.. |++
T Consensus 116 ~f~aLa~~~InI~~--Ist 132 (181)
T 3s1t_A 116 FCEALAAVGVNIEL--IST 132 (181)
T ss_dssp HHHHHHHTTCCCCE--EEE
T ss_pred HHHHHHHCCCcEEE--EEc
Confidence 99999999999996 543
No 35
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=96.27 E-value=0.015 Score=51.60 Aligned_cols=66 Identities=12% Similarity=0.266 Sum_probs=50.1
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCC-CeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHH
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPD-GRVMDLFFITDTRELLHTRKRREETIHHLEAVL 182 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~-g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l 182 (414)
...|.|.. .|+||.|++|+++|+..|+||.+-.+..+.+ +..--++.|.+. +...++|.++|.++.
T Consensus 29 ~~~LsVlV-eN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 29 EHLVSMLV-HNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEE-ECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTST
T ss_pred EEEEEEEE-CCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCcC
Confidence 57899999 9999999999999999999999988874455 655555677642 334566666666544
No 36
>2dt9_A Aspartokinase; protein-ligand complex, regulatory subunit, transferase; 2.15A {Thermus thermophilus} PDB: 2zho_A
Probab=96.14 E-value=0.09 Score=45.47 Aligned_cols=110 Identities=15% Similarity=0.250 Sum_probs=71.8
Q ss_pred CCeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCC--CCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHccc
Q 015010 108 PDVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTP--DGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKT 185 (414)
Q Consensus 108 ~~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~ 185 (414)
.+...|++.+-+|+||.++++..+|++.|+||.--....+. .|..--.|.|... +. ++..+.|++....
T Consensus 14 ~~~a~Itv~g~~~~~G~~a~if~~La~~~InVd~I~q~~~~~~~g~~~isf~V~~~-----d~---~~a~~~L~~~~~~- 84 (167)
T 2dt9_A 14 LDHAQIGLIGIPDQPGIAAKVFQALAERGIAVDMIIQGVPGHDPSRQQMAFTVKKD-----FA---QEALEALEPVLAE- 84 (167)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHHTCCCSCEEBCCCCSCTTEEEEEEEEEGG-----GH---HHHHHHHHHHHHH-
T ss_pred CCEEEEEEecCCCCCCHHHHHHHHHHHcCCcEEEEEcCCCCCCCCceEEEEEEehH-----HH---HHHHHHHHHHHHH-
Confidence 35788888765899999999999999999999863332211 2333335777541 12 2222333332111
Q ss_pred cccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEecC---cccHHH
Q 015010 186 LISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQD---HKGLIY 262 (414)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~D---rpGLL~ 262 (414)
. .. .+.++ .+...|.|.+.+ +||+++
T Consensus 85 ------------------------------~---------------~~--~v~~~----~~~a~vsvVG~gm~~~~Gv~a 113 (167)
T 2dt9_A 85 ------------------------------I---------------GG--EAILR----PDIAKVSIVGVGLASTPEVPA 113 (167)
T ss_dssp ------------------------------H---------------CC--EEEEE----CSEEEEEEEESSGGGSTHHHH
T ss_pred ------------------------------h---------------CC--cEEEe----CCEEEEEEECCCcccCcCHHH
Confidence 0 00 12222 356788899876 999999
Q ss_pred HHHHHHHhCCceEEe
Q 015010 263 DMMRTLKDYNTQVSY 277 (414)
Q Consensus 263 ~i~~~L~~~~l~I~~ 277 (414)
++..+|++.|+||..
T Consensus 114 ~~f~aL~~~~InI~~ 128 (167)
T 2dt9_A 114 KMFQAVASTGANIEM 128 (167)
T ss_dssp HHHHHHHHTTCCCCE
T ss_pred HHHHHHHHCCCCEEE
Confidence 999999999999963
No 37
>3s1t_A Aspartokinase; ACT domain, threonine binding, regulatory domain of aspartok transferase; 1.63A {Mycobacterium tuberculosis}
Probab=96.08 E-value=0.069 Score=47.02 Aligned_cols=109 Identities=17% Similarity=0.149 Sum_probs=67.1
Q ss_pred eEEEEE-EecCcccHHHHHHHHHHhCCceEEeEEEEEe-eC--CCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 015010 247 HTLIQI-LGQDHKGLIYDMMRTLKDYNTQVSYGRFFAK-PR--GNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRP 322 (414)
Q Consensus 247 ~t~v~V-~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~-t~--g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~ 322 (414)
.+.|+| .-+|+||.+++|..+|++.|+||.. |... +. .+...-.|.++.+ +.++..++.+.+.+.+. .
T Consensus 16 ~~~Iti~~~~~~~G~~a~If~~La~~~I~vd~--I~q~~s~~~~g~~~isftv~~~-----~~~~a~~~L~~~~~el~-~ 87 (181)
T 3s1t_A 16 EAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIG-F 87 (181)
T ss_dssp EEEEEEEEEESSTTHHHHHHHHHHHTTCCCCC--EEECCCCTTTCEEEEEEEEETT-----THHHHHHHHHHTHHHHC-C
T ss_pred EEEEEEecCCCCcCHHHHHHHHHHHcCCcEEE--EEecCCcccCCccEEEEEEehh-----HHHHHHHHHHHHHHhcC-c
Confidence 445554 3579999999999999999999985 4321 11 2344556777521 12222333333333332 1
Q ss_pred cceeeecCCCCceeeeeeeEEEEeC---CccchHHHHHHHHHhCCceEEEEE
Q 015010 323 LRVAVVNRGPDAELLVANPVELSGR---GRPLVFYDITLALKILSISIFSVE 371 (414)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~A~ 371 (414)
..+.. ..+ + .+|.|.|. ++||+.+.+.++|.+.|++|...-
T Consensus 88 ~~v~~-~~~----v---a~VsvVG~gm~~~~Gvaa~~f~aLa~~~InI~~Is 131 (181)
T 3s1t_A 88 SQLLY-DDH----I---GKVSLIGAGMRSHPGVTATFCEALAAVGVNIELIS 131 (181)
T ss_dssp SEEEE-ESC----E---EEEEEEEECCTTCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred ceEEE-eCC----E---EEEEEEecccccCchHHHHHHHHHHHCCCcEEEEE
Confidence 11110 011 1 25666655 899999999999999999998755
No 38
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=96.05 E-value=0.012 Score=53.12 Aligned_cols=50 Identities=20% Similarity=0.301 Sum_probs=38.0
Q ss_pred eEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCC----CCeEEEEEEEec
Q 015010 110 VFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTP----DGRVMDLFFITD 160 (414)
Q Consensus 110 ~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~----~g~~~d~f~V~~ 160 (414)
...|.+.+ .||||+|++|+.+|++++.||...+..+.. ++.+.-.+.+.+
T Consensus 4 ~VtL~I~a-~DRpGLLsDIt~vLAe~kiNIltIn~~~~~kG~~ng~A~I~IEV~d 57 (223)
T 1y7p_A 4 LRGLRIIA-ENKIGVLRDLTTIIAEEGGNITFAQTFLIKHGEHEGKALIYFEIEG 57 (223)
T ss_dssp CEEEEEEE-ECCTTHHHHHHHHCC----CEEEEEEEECCSSTTTTEEEEEEEECS
T ss_pred eEEEEEEE-cCCCCHHHHHHHHHHHcCCCceEEEEEccccCCcCCEEEEEEEECC
Confidence 46899999 999999999999999999999999999955 566554455544
No 39
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.97 E-value=0.0083 Score=52.08 Aligned_cols=34 Identities=18% Similarity=0.144 Sum_probs=32.6
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCceEEEEEEec
Q 015010 341 PVELSGRGRPLVFYDITLALKILSISIFSVEIGR 374 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T 374 (414)
.|+|.+.||+|||+||+.+|.+.+++|..+.+.+
T Consensus 2 ~~~v~~~dr~g~l~~i~~~l~~~~~ni~~~~~~~ 35 (190)
T 2jhe_A 2 RLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDP 35 (190)
T ss_dssp EEEEEECSCTTHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEEEecCCcHHHHHHHHHHHcCCCeEEEEEec
Confidence 5899999999999999999999999999999988
No 40
>2fgc_A Acetolactate synthase, small subunit; regulatory subunit, structural genomi protein structure initiative; 2.30A {Thermotoga maritima} SCOP: d.58.18.6 d.58.18.6
Probab=95.88 E-value=0.027 Score=50.04 Aligned_cols=66 Identities=8% Similarity=0.081 Sum_probs=46.7
Q ss_pred EEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHH
Q 015010 248 TLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMEL 319 (414)
Q Consensus 248 t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l 319 (414)
..+.|...|+||.|++|++.|+..|+||.+-.+..+.+.+...=++.++.+ +...++|.+.|.+.+
T Consensus 30 ~~LsVlVeN~pGvLaRItglfsrRG~NI~SLtV~~ted~gisRitIvV~g~------e~~ieqL~kQL~KLi 95 (193)
T 2fgc_A 30 HLVSMLVHNKPGVMRKVANLFARRGFNISSITVGESETPGLSRLVIMVKGD------DKTIEQIEKQAYKLV 95 (193)
T ss_dssp EEEEEEEECCTTHHHHHHHHHHTTTCEEEEEEEEECSSTTEEEEEEEEEEC------TTHHHHHHHHHTTST
T ss_pred EEEEEEECCCChHHHHHHHHHHHCCceEEEEEeeccCCCCEEEEEEEEECC------HHHHHHHHHHhcCcC
Confidence 579999999999999999999999999998666533333344445555421 245667777665543
No 41
>1y7p_A Hypothetical protein AF1403; structural genomics, protein structure initiative, PSI, alpha-beta-alpha sandwich; HET: RIP; 1.90A {Archaeoglobus fulgidus} SCOP: c.23.1.7 d.58.18.12
Probab=95.76 E-value=0.013 Score=52.91 Aligned_cols=35 Identities=11% Similarity=-0.036 Sum_probs=29.3
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCceEEEEEEecc
Q 015010 341 PVELSGRGRPLVFYDITLALKILSISIFSVEIGRY 375 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~ 375 (414)
.|+|.+.||||+|++|+.+|+++++||......+.
T Consensus 6 tL~I~a~DRpGLLsDIt~vLAe~kiNIltIn~~~~ 40 (223)
T 1y7p_A 6 GLRIIAENKIGVLRDLTTIIAEEGGNITFAQTFLI 40 (223)
T ss_dssp EEEEEEECCTTHHHHHHHHCC----CEEEEEEEEC
T ss_pred EEEEEEcCCCCHHHHHHHHHHHcCCCceEEEEEcc
Confidence 78999999999999999999999999999999884
No 42
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=95.68 E-value=0.048 Score=48.86 Aligned_cols=112 Identities=15% Similarity=0.122 Sum_probs=66.9
Q ss_pred CeEEEEEE-ecCcccHHHHHHHHHHhCCceEEeEEEEEee---CCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcC
Q 015010 246 SHTLIQIL-GQDHKGLIYDMMRTLKDYNTQVSYGRFFAKP---RGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLR 321 (414)
Q Consensus 246 ~~t~v~V~-~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t---~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~ 321 (414)
+.+.|+|. .+|+||+.++|-.+|++.|+||.. |.... ......-.|.+..+ +.++...+.+.+...+..
T Consensus 34 ~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDm--I~Qs~s~~~~~~~~~sftv~~~-----d~~~~~~~l~~~~~~~~~ 106 (200)
T 4go7_X 34 SEAKVTIVGLPDIPGYAAKVFRAVADADVNIDM--VLQNVSKVEDGKTDITFTCSRD-----VGPAAVEKLDSLRNEIGF 106 (200)
T ss_dssp SEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCC--EECCCCC--CCEEEEEEEEEGG-----GHHHHHHHHHTTHHHHCC
T ss_pred CEEEEEEecCCCCccHHHHHHHHHHHhCcceEE--EeeccccccccceEEEEecchh-----hHHHHHHHHHHHHhhhce
Confidence 45667775 489999999999999999999985 54211 12244455766421 122223333333333321
Q ss_pred CcceeeecCCCCceeeeeeeEEEEeCCccchHHHHHHHHHhCCceEEEE
Q 015010 322 PLRVAVVNRGPDAELLVANPVELSGRGRPLVFYDITLALKILSISIFSV 370 (414)
Q Consensus 322 ~~~~~~~~~~~~~~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A 370 (414)
. .+.. . ..+..-..+-.-...+||+.+++-.+|.+.|+||..-
T Consensus 107 ~-~v~~-~----~~iakVSvVG~GM~~~~GVaak~F~aLa~~~INI~mI 149 (200)
T 4go7_X 107 S-QLLY-D----DHIGKVSLIGAGMRSHPGVTATFCEALAAVGVNIELI 149 (200)
T ss_dssp S-EEEE-E----CCEEEEEEEEESCTTCHHHHHHHHHHHHHTTCCCCEE
T ss_pred e-eEEE-e----cCeeeeeeeccccccCCCcHHHHHHHHHHCCCCEEEE
Confidence 1 1100 0 1111112333334579999999999999999999864
No 43
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=95.47 E-value=0.06 Score=46.46 Aligned_cols=60 Identities=15% Similarity=0.386 Sum_probs=43.8
Q ss_pred EEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHH
Q 015010 112 LLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAV 181 (414)
Q Consensus 112 ~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~ 181 (414)
.|+|.| .||+||+++|+.+|+..+.||....+.+ . |. +++.-+ ..+.+....+...+..+
T Consensus 2 ~~~v~~-~dr~g~l~~i~~~l~~~~~ni~~~~~~~-~-g~----i~~~~~---~~~~~~~~~L~~~l~~i 61 (190)
T 2jhe_A 2 RLEVFC-EDRLGLTRELLDLLVLRGIDLRGIEIDP-I-GR----IYLNFA---ELEFESFSSLMAEIRRI 61 (190)
T ss_dssp EEEEEE-CSCTTHHHHHHHHHHHTTCCEEEEEEET-T-TE----EEEEEC---CCCHHHHHHHHHHHHHS
T ss_pred EEEEEE-ecCCcHHHHHHHHHHHcCCCeEEEEEec-C-CE----EEEEEE---eCCHHHHHHHHHHHHcC
Confidence 588999 9999999999999999999999999977 3 54 223221 12445556665555543
No 44
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=94.71 E-value=1.7 Score=43.15 Aligned_cols=109 Identities=18% Similarity=0.264 Sum_probs=72.4
Q ss_pred CeEEEEEE-EecCCcchHHHHHHHHHhCCCeEEEEEEEeCC--CCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHccc
Q 015010 109 DVFLLKFW-CFQDRKGLLHDVTEVLCELELTIKRVKVSTTP--DGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKT 185 (414)
Q Consensus 109 ~~~~i~v~-~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~--~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~ 185 (414)
+.+.|+|. . +|+||.+++|...|+++|+||.--...|.. +|..--.|.|... +.++ ..+.|++....
T Consensus 263 ~~~~i~v~~~-~~~~g~~~~If~~La~~~I~vd~I~q~~s~~~~g~~~isf~v~~~-----~~~~---a~~~l~~~~~~- 332 (421)
T 3ab4_A 263 SEAKVTVLGI-SDKPGEAAKVFRALADAEINIDMVLQNVFSVEDGTTDITFTCPRS-----DGRR---AMEILKKLQVQ- 332 (421)
T ss_dssp SEEEEEEEEE-ESSTTHHHHHHHHHHHTTCCCEEEEECCCC--CCEEEEEEEEETT-----THHH---HHHHHHHHHTT-
T ss_pred CEEEEEEecc-CCcccHHHHHHHHHHHcCCcEEEEEccCccccCCcceEEEEEech-----hHHH---HHHHHHHHHHH-
Confidence 56778888 6 899999999999999999999865444433 4533345777642 2222 22223332111
Q ss_pred cccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEec---CcccHHH
Q 015010 186 LISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQ---DHKGLIY 262 (414)
Q Consensus 186 ~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpGLL~ 262 (414)
+ .. ..+.++ .+...|.|.+. ++||.++
T Consensus 333 ------------~---------------------------------~~-~~v~~~----~~~a~vsvVG~gm~~~~Gv~a 362 (421)
T 3ab4_A 333 ------------G---------------------------------NW-TNVLYD----DQVGKVSLVGAGMKSHPGVTA 362 (421)
T ss_dssp ------------T---------------------------------TC-SEEEEE----CCEEEEEEECGGGTSCTTHHH
T ss_pred ------------c---------------------------------CC-ceEEEe----CCeEEEEEEccCcccCccHHH
Confidence 0 00 012232 35668888885 7999999
Q ss_pred HHHHHHHhCCceEEe
Q 015010 263 DMMRTLKDYNTQVSY 277 (414)
Q Consensus 263 ~i~~~L~~~~l~I~~ 277 (414)
++..+|++.|+||..
T Consensus 363 ~~f~aL~~~~InI~~ 377 (421)
T 3ab4_A 363 EFMEALRDVNVNIEL 377 (421)
T ss_dssp HHHHHHHHTTCCCCE
T ss_pred HHHHHHHHCCCCEEE
Confidence 999999999999993
No 45
>4go7_X Aspartokinase; transferase; 2.00A {Mycobacterium tuberculosis} PDB: 4go5_X
Probab=94.52 E-value=0.32 Score=43.48 Aligned_cols=53 Identities=15% Similarity=0.166 Sum_probs=37.5
Q ss_pred CCeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeC--CCCeEEEEEEEec
Q 015010 108 PDVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTT--PDGRVMDLFFITD 160 (414)
Q Consensus 108 ~~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~--~~g~~~d~f~V~~ 160 (414)
.+...|+|.+-+|+||..++|..+|++.|+||----...+ .++.....|.+..
T Consensus 33 ~~~a~Iti~g~~~~pG~aa~IF~~La~~~InVDmI~Qs~s~~~~~~~~~sftv~~ 87 (200)
T 4go7_X 33 RSEAKVTIVGLPDIPGYAAKVFRAVADADVNIDMVLQNVSKVEDGKTDITFTCSR 87 (200)
T ss_dssp CSEEEEEEEEEECSTTHHHHHHHHHHHTTCCCCCEECCCCC--CCEEEEEEEEEG
T ss_pred CCEEEEEEecCCCCccHHHHHHHHHHHhCcceEEEeeccccccccceEEEEecch
Confidence 3577888875599999999999999999999974322221 1344444576654
No 46
>3ab4_A Aspartokinase; aspartate kinase, concerted inhibition, alternative initiati amino-acid biosynthesis, ATP-binding; HET: LYS; 2.47A {Corynebacterium glutamicum} PDB: 3aaw_A* 3ab2_A
Probab=94.28 E-value=0.18 Score=50.30 Aligned_cols=105 Identities=19% Similarity=0.183 Sum_probs=66.9
Q ss_pred CeEEEEEE-ecCcccHHHHHHHHHHhCCceEEeEEEEEe-eC--CCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcC
Q 015010 246 SHTLIQIL-GQDHKGLIYDMMRTLKDYNTQVSYGRFFAK-PR--GNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLR 321 (414)
Q Consensus 246 ~~t~v~V~-~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~-t~--g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~ 321 (414)
+.+.|+|. ..|+||.+++|...|+++|+||.. |... +. .+...=.|.+.. .+.++.. +.|++ +..
T Consensus 263 ~~~~i~v~~~~~~~g~~~~If~~La~~~I~vd~--I~q~~s~~~~g~~~isf~v~~-----~~~~~a~---~~l~~-~~~ 331 (421)
T 3ab4_A 263 SEAKVTVLGISDKPGEAAKVFRALADAEINIDM--VLQNVFSVEDGTTDITFTCPR-----SDGRRAM---EILKK-LQV 331 (421)
T ss_dssp SEEEEEEEEEESSTTHHHHHHHHHHHTTCCCEE--EEECCCC--CCEEEEEEEEET-----TTHHHHH---HHHHH-HHT
T ss_pred CEEEEEEeccCCcccHHHHHHHHHHHcCCcEEE--EEccCccccCCcceEEEEEec-----hhHHHHH---HHHHH-HHH
Confidence 45677887 589999999999999999999985 4311 11 123344566652 1223322 33332 222
Q ss_pred CcceeeecCCCCceeeee---eeEEEEeC---CccchHHHHHHHHHhCCceEEE
Q 015010 322 PLRVAVVNRGPDAELLVA---NPVELSGR---GRPLVFYDITLALKILSISIFS 369 (414)
Q Consensus 322 ~~~~~~~~~~~~~~v~~~---~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~ 369 (414)
++.. ..+.+. .++.|.|. ++||+++.+..+|.+.|+||..
T Consensus 332 ~~~~--------~~v~~~~~~a~vsvVG~gm~~~~Gv~a~~f~aL~~~~InI~~ 377 (421)
T 3ab4_A 332 QGNW--------TNVLYDDQVGKVSLVGAGMKSHPGVTAEFMEALRDVNVNIEL 377 (421)
T ss_dssp TTTC--------SEEEEECCEEEEEEECGGGTSCTTHHHHHHHHHHHTTCCCCE
T ss_pred HcCC--------ceEEEeCCeEEEEEEccCcccCccHHHHHHHHHHHCCCCEEE
Confidence 2111 011111 26777775 7999999999999999999984
No 47
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=93.26 E-value=1.2 Score=44.92 Aligned_cols=104 Identities=16% Similarity=0.167 Sum_probs=68.6
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHH---
Q 015010 246 SHTLIQILG---QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMEL--- 319 (414)
Q Consensus 246 ~~t~v~V~~---~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l--- 319 (414)
+.+.|+|.+ .++||+++++..+|+++|+||.. |... .+. ..=.|.++. +..++..+.|.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~--IsQ~-tse-~~Is~~V~~--------~d~~~a~~~L~~~l~~~ 384 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVIL--ISQG-SSE-TNISLVVSE--------EDVDKALKALKREFGDF 384 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEE--EEEC-CTT-CCEEEEEEG--------GGHHHHHHHHHHHHCC-
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEE--EEec-CCC-CEEEEEEec--------hHHHHHHHHHHHHHhhh
Confidence 567888886 67889999999999999999985 4311 121 223466652 11334555566655
Q ss_pred -----cCCcceeeecCCCCceeeee---eeEEEEeC---CccchHHHHHHHHHhCCceEEE
Q 015010 320 -----LRPLRVAVVNRGPDAELLVA---NPVELSGR---GRPLVFYDITLALKILSISIFS 369 (414)
Q Consensus 320 -----~~~~~~~~~~~~~~~~v~~~---~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~ 369 (414)
..+... ..+.+. .++.|.|. ++||+++.+..+|.+.|+||..
T Consensus 385 ~~~~~~~~~~~--------~~v~~~~~~a~vsvVG~gm~~~~Gvaak~f~aL~~~~InI~m 437 (473)
T 3c1m_A 385 GKKSFLNNNLI--------RDVSVDKDVCVISVVGAGMRGAKGIAGKIFTAVSESGANIKM 437 (473)
T ss_dssp ---CTTSCCCE--------EEEEEEEEEEEEEEECTTTTTCTTHHHHHHHHHHHHTCCCCE
T ss_pred ccccccccccc--------ceEEEeCCcEEEEEEecCCCCChhHHHHHHHHHHHCCCCEEE
Confidence 221101 012221 36778876 5899999999999999999953
No 48
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=92.78 E-value=0.21 Score=47.19 Aligned_cols=54 Identities=9% Similarity=0.122 Sum_probs=39.7
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 341 PVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.|-+...|+||-||++-..|+..|||+.+ |.+++.+.+.| .+.||| |-+|..-+
T Consensus 202 sl~f~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~-~Y~Ffv-D~eg~~~d 255 (283)
T 2qmx_A 202 SIVFALPNEQGSLFRALATFALRGIDLTK--IESRPSRKKAF-EYLFYA-DFIGHRED 255 (283)
T ss_dssp EEEEEEECCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTT-EEEEEE-EEESCTTS
T ss_pred EEEEEcCCCCchHHHHHHHHHHcCCCeeE--EEeeEcCCCCc-ceEEEE-EEecCCCc
Confidence 44444469999999999999999999995 54443555554 568988 66776543
No 49
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=90.68 E-value=1.4 Score=42.32 Aligned_cols=53 Identities=15% Similarity=0.284 Sum_probs=38.8
Q ss_pred eEEEEEEec--CcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEE-EEEEEEecCCCC
Q 015010 247 HTLIQILGQ--DHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCE-VDLFIMQADGKK 301 (414)
Q Consensus 247 ~t~v~V~~~--DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~-~D~F~v~~~g~~ 301 (414)
.+.+.+..+ |+||-|+++...|+.+|+|.. +|.+....... .=.|+++.+|..
T Consensus 206 kts~i~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~ 261 (329)
T 3luy_A 206 YESVLTLIPLVTGPGVLANLLDVFRDAGLNMT--SFISRPIKGRTGTYSFIVTLDAAP 261 (329)
T ss_dssp EEEEEEEECSCCSTTHHHHHHHHHHHTTCCEE--EEEEEEETTEEEEEEEEEEESSCT
T ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHCCcceE--EEEeeECCCCCccEEEEEEEeCCc
Confidence 344444444 799999999999999999999 48775544444 445788877764
No 50
>3luy_A Probable chorismate mutase; structural genomics, APC38059, 3-phenylp PSI-2, protein structure initiative; HET: PPY; 2.00A {Bifidobacterium adolescentis}
Probab=90.61 E-value=1.1 Score=43.11 Aligned_cols=48 Identities=15% Similarity=0.110 Sum_probs=37.3
Q ss_pred CCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 347 RGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 347 ~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.|+||-||++-..|+..|||+.+ |.++....+.| .+.||| |.+|..-+
T Consensus 216 ~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~-~Y~Ffi-D~eg~~~d 263 (329)
T 3luy_A 216 VTGPGVLANLLDVFRDAGLNMTS--FISRPIKGRTG-TYSFIV-TLDAAPWE 263 (329)
T ss_dssp CCSTTHHHHHHHHHHHTTCCEEE--EEEEEETTEEE-EEEEEE-EESSCTTS
T ss_pred CCCCCHHHHHHHHHHHCCcceEE--EEeeECCCCCc-cEEEEE-EEeCCcCC
Confidence 38999999999999999999985 55444666655 568987 67786544
No 51
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=90.54 E-value=0.52 Score=45.02 Aligned_cols=54 Identities=15% Similarity=0.103 Sum_probs=39.4
Q ss_pred eEEEEeC-CccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 341 PVELSGR-GRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 341 ~lev~~~-DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.|-+... |+||-||++-..|+..|||+.+ |.++....+.| .+.||| |.+|..-+
T Consensus 203 Sl~f~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~-~Y~Ffi-D~eg~~~d 257 (313)
T 3mwb_A 203 TVVVPLPEDHPGALMEILDQFASRGVNLSR--IESRPTGQYLG-HYFFSI-DADGHATD 257 (313)
T ss_dssp EEEEECSSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTT-SEEEEE-EEESCTTS
T ss_pred EEEEEeCCCCCCHHHHHHHHHHHCCccEEE--EEEeecCCCCc-cEEEEE-EEeCCCCc
Confidence 4445554 9999999999999999999985 54443555544 468998 66676533
No 52
>2qmx_A Prephenate dehydratase; APC86053, L-Phe inhibition, PDT, CHL tepidum TLS, structural genomics, PSI-2, protein structure initiative; HET: PHE; 2.30A {Chlorobium tepidum tls}
Probab=90.13 E-value=0.87 Score=42.86 Aligned_cols=53 Identities=15% Similarity=0.206 Sum_probs=41.7
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCE-EEEEEEEecCCCC
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNC-EVDLFIMQADGKK 301 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~-~~D~F~v~~~g~~ 301 (414)
.|.|.+..+|+||-|+++...|+.+|+|+. +|.+...... ..-.|+++-+|..
T Consensus 200 ktsl~f~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfvD~eg~~ 253 (283)
T 2qmx_A 200 KTSIVFALPNEQGSLFRALATFALRGIDLT--KIESRPSRKKAFEYLFYADFIGHR 253 (283)
T ss_dssp EEEEEEEEECCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTEEEEEEEEESCT
T ss_pred eEEEEEEcCCCCchHHHHHHHHHHcCCCee--EEEeeEcCCCCcceEEEEEEecCC
Confidence 466777778999999999999999999999 4887554433 4556888866763
No 53
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.64 E-value=0.98 Score=44.75 Aligned_cols=50 Identities=16% Similarity=0.135 Sum_probs=44.3
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEec
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITD 160 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~ 160 (414)
+...|.+.- .|+||.+..|+.+|.++|+||......+ .++.++-++-|..
T Consensus 330 ~~~rl~~~h-~d~PGvi~~i~~iL~~~~iNIa~m~~~r-~g~~A~~vidvD~ 379 (404)
T 1sc6_A 330 GGRRLMHIH-ENRPGVLTALNKIFAEQGVNIAAQYLQT-SAQMGYVVIDIEA 379 (404)
T ss_dssp SSEEEEEEE-ESCTTHHHHHHHHHHHTTCEEEEEEEEE-CSSEEEEEEEEEC
T ss_pred CcceEEEEe-CCCCCHHHHHHHHHHHcCCCHHHhhccC-CCCEEEEEEEcCC
Confidence 456788888 9999999999999999999999999999 8888887777765
No 54
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=89.31 E-value=0.59 Score=46.36 Aligned_cols=60 Identities=8% Similarity=0.021 Sum_probs=45.2
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCC-CCCchHHHHHHHH
Q 015010 341 PVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGN-LEPRNKIEDLVRK 408 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~-~l~~~~~~~~i~~ 408 (414)
.|-+.-+|+||.+..|+.+|.++|+||..-...+ .|+. +.-++-| ++. ++.++ .+++|++
T Consensus 333 rl~~~h~d~PGvi~~i~~iL~~~~iNIa~m~~~r--~g~~--A~~vidv---D~~~~~~~~-~l~~l~~ 393 (404)
T 1sc6_A 333 RLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQT--SAQM--GYVVIDI---EADEDVAEK-ALQAMKA 393 (404)
T ss_dssp EEEEEEESCTTHHHHHHHHHHHTTCEEEEEEEEE--CSSE--EEEEEEE---ECCHHHHHH-HHHHHHT
T ss_pred eEEEEeCCCCCHHHHHHHHHHHcCCCHHHhhccC--CCCE--EEEEEEc---CCCCCCCHH-HHHHHhc
Confidence 5777888999999999999999999999999999 8887 5544444 332 13333 5566653
No 55
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=89.27 E-value=0.96 Score=42.20 Aligned_cols=49 Identities=14% Similarity=0.255 Sum_probs=36.2
Q ss_pred eEEEEe---CCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCC
Q 015010 341 PVELSG---RGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEAD 393 (414)
Q Consensus 341 ~lev~~---~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~ 393 (414)
.|-+.. .|+||-|+++-..|+..|||+.+ |.+++.+.+.| .+.||| |.+
T Consensus 188 sl~f~~~~~~~~pGaL~~~L~~Fa~~gINLtk--IESRP~~~~~~-~Y~Ffi-D~e 239 (267)
T 2qmw_A 188 SLMFLITPMHDKPGLLASVLNTFALFNINLSW--IESRPLKTQLG-MYRFFV-QAD 239 (267)
T ss_dssp EEEEEEEESSCCTTHHHHHHHHHHTTTCCEEE--EEEEECSSSTT-CEEEEE-EES
T ss_pred EEEEEcCCCCCCcChHHHHHHHHHHcCCCeeE--EEEeecCCCCc-cEEEEE-EEe
Confidence 444455 79999999999999999999995 54433555544 468998 444
No 56
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=88.51 E-value=1.4 Score=45.12 Aligned_cols=53 Identities=11% Similarity=0.079 Sum_probs=43.0
Q ss_pred CCCeEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEe
Q 015010 244 SPSHTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQ 296 (414)
Q Consensus 244 ~~~~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~ 296 (414)
.+.+..+.+.-+|+||.+..++..|.++|+||.+-++.....|+.+.=++.++
T Consensus 451 ~~~~~~l~v~~~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd 503 (529)
T 1ygy_A 451 RAQGINLIIHYVDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLD 503 (529)
T ss_dssp ESCSEEEEEEESCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEES
T ss_pred cCCccEEEEEcCCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEEC
Confidence 34567788999999999999999999999999999998554566666555554
No 57
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=88.19 E-value=1.7 Score=43.55 Aligned_cols=104 Identities=13% Similarity=0.150 Sum_probs=69.0
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 015010 246 SHTLIQILG---QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRP 322 (414)
Q Consensus 246 ~~t~v~V~~---~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~ 322 (414)
+.+.|+|.. .+.||.+++|..+|++++++|.. |.+. . ..-.|.++.+. +. ...+.+.+.|.+.+...
T Consensus 297 ~~~~i~i~~~~~~~~~g~~~~if~~l~~~~i~vd~--i~~~-~---~~is~~V~~~d--~~--~~~~~~~~el~~~~~~~ 366 (446)
T 3tvi_A 297 NFTVIAIEKALLNSEVGFCRKILSILEMYGVSFEH--MPSG-V---DSVSLVIEDCK--LD--GKCDKIIEEIKKQCNPD 366 (446)
T ss_dssp EEEEEEEECTTGGGSTTHHHHHHHHHHTTTCCEEE--BCEE-T---TEEEEEEEHHH--HT--TTHHHHHHHHHHHSCCS
T ss_pred CEEEEEEEecCCCccHHHHHHHHHHHHHcCCcEEE--EecC-C---CEEEEEEecch--HH--HHHHHHHHHHHHhcCCC
Confidence 456788886 68999999999999999999985 4422 1 22346665211 10 12344555555544311
Q ss_pred cceeeecCCCCceeeee---eeEEEEeC---CccchHHHHHHHHHhCCceEEEEE
Q 015010 323 LRVAVVNRGPDAELLVA---NPVELSGR---GRPLVFYDITLALKILSISIFSVE 371 (414)
Q Consensus 323 ~~~~~~~~~~~~~v~~~---~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~A~ 371 (414)
++.+. .+|.|.|. .+||+.+++-.+|.+.|++|..--
T Consensus 367 ------------~v~v~~~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~mIs 409 (446)
T 3tvi_A 367 ------------SIEIHPNMALVATVGTGMAKTKGIANKIFTALSKENVNIRMID 409 (446)
T ss_dssp ------------EEEEEEEEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEEEE
T ss_pred ------------cEEEeCCeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEEEE
Confidence 11111 37777776 589999999999999999998644
No 58
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=87.74 E-value=2.3 Score=43.59 Aligned_cols=61 Identities=16% Similarity=0.159 Sum_probs=47.7
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeC-CCCeEEEEEEEecCCCCCCCHHHHHHH
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTT-PDGRVMDLFFITDTRELLHTRKRREET 174 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~-~~g~~~d~f~V~~~~~~~~~~~~~~~i 174 (414)
....|.+.- +|+||.+.+|+..|.++|+||...++... .++.++-++.+.++ .+++.+++|
T Consensus 453 ~~~~l~v~~-~D~PG~I~~v~~~Lg~~~INIa~m~v~r~~~~~~a~~~i~vd~~----~~~~~l~~l 514 (529)
T 1ygy_A 453 QGINLIIHY-VDRPGALGKIGTLLGTAGVNIQAAQLSEDAEGPGATILLRLDQD----VPDDVRTAI 514 (529)
T ss_dssp CSEEEEEEE-SCCTTHHHHHHHHHHHTTCCEEEEEEEECSSSSCEEEEEEESSC----CCHHHHHHH
T ss_pred CccEEEEEc-CCCCchHHHHHHHHHhcCCCeeeEEEecCCCCCEEEEEEEECCC----CCHHHHHHH
Confidence 456788888 99999999999999999999999999874 35667766777542 355555555
No 59
>3mwb_A Prephenate dehydratase; L-Phe, PSI, MCSG, structural genomics, midwest center for ST genomics, protein structure initiative, lyase; HET: MSE PHE; 2.00A {Arthrobacter aurescens}
Probab=87.41 E-value=1.7 Score=41.49 Aligned_cols=54 Identities=22% Similarity=0.433 Sum_probs=41.3
Q ss_pred CeEEEEEEec-CcccHHHHHHHHHHhCCceEEeEEEEEeeCCCE-EEEEEEEecCCCC
Q 015010 246 SHTLIQILGQ-DHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNC-EVDLFIMQADGKK 301 (414)
Q Consensus 246 ~~t~v~V~~~-DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~-~~D~F~v~~~g~~ 301 (414)
..|.|.+..+ |+||-|+++...|+.+|+|.. +|.+...... ..=.|+++.+|..
T Consensus 200 ~kTSl~f~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~eg~~ 255 (313)
T 3mwb_A 200 DKTTVVVPLPEDHPGALMEILDQFASRGVNLS--RIESRPTGQYLGHYFFSIDADGHA 255 (313)
T ss_dssp EEEEEEEECSSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTSEEEEEEEESCT
T ss_pred CeEEEEEEeCCCCCCHHHHHHHHHHHCCccEE--EEEEeecCCCCccEEEEEEEeCCC
Confidence 4577777785 999999999999999999998 4876544323 3446888866763
No 60
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=84.26 E-value=5.6 Score=39.40 Aligned_cols=51 Identities=14% Similarity=0.129 Sum_probs=42.9
Q ss_pred CCCeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEe
Q 015010 107 PPDVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFIT 159 (414)
Q Consensus 107 ~~~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~ 159 (414)
.++...|.+.= .|+||.+.+|..+|+++|+||..-.-.| .++++.-+.-|.
T Consensus 340 ~~~~~r~~~~h-~n~p~~~~~i~~~~~~~~~ni~~~~~~~-~~~~~y~~~d~~ 390 (416)
T 3k5p_A 340 RPTGTRFMHVH-ENRPGILNSLMNVFSHHHINIASQFLQT-DGEVGYLVMEAD 390 (416)
T ss_dssp CSSSEEEEEEE-CCCTTHHHHHHHHHHHTTCCEEEEEEEE-CSSCEEEEEEEC
T ss_pred CCCceEEEEEe-cCCccHHHHHHHHHHHcCCCHHHHhccC-CCceEEEEEEec
Confidence 34578999999 9999999999999999999999888888 777766555553
No 61
>2qmw_A PDT, prephenate dehydratase; APC85812, prephenate dehydratase (PDT), staphylococcus aureu aureus MU50, structural genomics, PSI-2; 2.30A {Staphylococcus aureus subsp} SCOP: c.94.1.1 d.58.18.3
Probab=83.30 E-value=3.3 Score=38.53 Aligned_cols=51 Identities=25% Similarity=0.361 Sum_probs=39.1
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCE-EEEEEEEecC
Q 015010 246 SHTLIQILG---QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNC-EVDLFIMQAD 298 (414)
Q Consensus 246 ~~t~v~V~~---~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~-~~D~F~v~~~ 298 (414)
..|.+.+.. +|+||-|+++...|+.+|+|.. +|.+...... ..-.|+++-+
T Consensus 185 ~ktsl~f~~~~~~~~pGaL~~~L~~Fa~~gINLt--kIESRP~~~~~~~Y~FfiD~e 239 (267)
T 2qmw_A 185 NATSLMFLITPMHDKPGLLASVLNTFALFNINLS--WIESRPLKTQLGMYRFFVQAD 239 (267)
T ss_dssp SCSEEEEEEEESSCCTTHHHHHHHHHHTTTCCEE--EEEEEECSSSTTCEEEEEEES
T ss_pred CeEEEEEEcCCCCCCcChHHHHHHHHHHcCCCee--EEEEeecCCCCccEEEEEEEe
Confidence 345666666 8999999999999999999999 4887554433 4456888855
No 62
>3tvi_A Aspartokinase; structural genomics, ACT domains, regulatory domains, kinase transferase, PSI-2, protein structure initiative; HET: LYS; 3.00A {Clostridium acetobutylicum}
Probab=83.06 E-value=19 Score=35.83 Aligned_cols=32 Identities=19% Similarity=0.414 Sum_probs=27.9
Q ss_pred CeEEEEEEec---CcccHHHHHHHHHHhCCceEEe
Q 015010 246 SHTLIQILGQ---DHKGLIYDMMRTLKDYNTQVSY 277 (414)
Q Consensus 246 ~~t~v~V~~~---DrpGLL~~i~~~L~~~~l~I~~ 277 (414)
+...|.|.+. .+||+.+++..+|++.|+||..
T Consensus 373 ~vA~VSvVG~gM~~~~Gvaarif~aLa~~~InI~m 407 (446)
T 3tvi_A 373 NMALVATVGTGMAKTKGIANKIFTALSKENVNIRM 407 (446)
T ss_dssp EEEEEEEECGGGSSCTTHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEEECCCccCChhHHHHHHHHHHHCCCCEEE
Confidence 4568888875 5899999999999999999984
No 63
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=82.83 E-value=1.7 Score=44.33 Aligned_cols=107 Identities=11% Similarity=0.119 Sum_probs=66.2
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEe-cCCCCC-CChHHHHHHHHHHHHHHc
Q 015010 246 SHTLIQILG---QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQ-ADGKKI-VDPSKQDALCSRLRMELL 320 (414)
Q Consensus 246 ~~t~v~V~~---~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~-~~g~~~-~~~~~~~~l~~~L~~~l~ 320 (414)
+.+.|+|.+ .++||.+++|-.+|+++|++|.. |.++ . .-=.|.++ .+.... ...+.++ .+.+.+.
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~--I~ss-e---~sis~~v~~~~~~~~~~~~~~l~----~~~~el~ 409 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDV--VATS-E---VSISLTLDPSKLWSRELIQQELD----HVVEELE 409 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEE--EEEE-T---TEEEEEECCGGGSSSCCCHHHHH----HHHHHHT
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEE--EEeC-C---CeEEEEEechHhhhhhHHHHHHH----HHHHHhC
Confidence 457888886 67899999999999999999996 5532 1 22346664 221110 0112222 2333343
Q ss_pred CCcceeeecCCCCceeeeeeeEEEEeC--CccchHHHHHHHHHhCCceEEEE
Q 015010 321 RPLRVAVVNRGPDAELLVANPVELSGR--GRPLVFYDITLALKILSISIFSV 370 (414)
Q Consensus 321 ~~~~~~~~~~~~~~~v~~~~~lev~~~--DRpGLL~dIt~~l~~~gl~I~~A 370 (414)
.-..+... ..+ .+|.|.|. ..||+.+.+-.+|.+.|+||..-
T Consensus 410 ~~~~v~~~-----~~~---a~VsiVG~m~~~~Gvaa~~f~aL~~~~InI~mI 453 (510)
T 2cdq_A 410 KIAVVNLL-----KGR---AIISLIGNVQHSSLILERAFHVLYTKGVNVQMI 453 (510)
T ss_dssp TTSEEEEE-----EEE---EEEEEEECGGGHHHHHHHHHHHHHHHTCCCSEE
T ss_pred CCCeEEEe-----CCc---EEEEEEEECCCChhHHHHHHHHHHHCCCCEEEE
Confidence 21111110 011 25666665 78999999999999999999854
No 64
>3c1m_A Probable aspartokinase; allosteric inhibition, threonine-sensitive, ACT DOMA amino-acid biosynthesis, threonine biosynthesis; HET: ANP; 2.30A {Methanocaldococcus jannaschii} PDB: 3c1n_A 3c20_A 2hmf_A*
Probab=79.83 E-value=38 Score=33.90 Aligned_cols=115 Identities=14% Similarity=0.287 Sum_probs=70.7
Q ss_pred CeEEEEEEEe--cCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHcccc
Q 015010 109 DVFLLKFWCF--QDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTL 186 (414)
Q Consensus 109 ~~~~i~v~~~--~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~ 186 (414)
+...|+|.+. .++||.++++..+|+++|+||.--...|+.. .+ .|.|... ..++..+.|.+.+.+
T Consensus 317 ~~a~Isv~g~~m~~~~G~~a~if~~La~~~InV~~IsQ~tse~--~I-s~~V~~~--------d~~~a~~~L~~~l~~-- 383 (473)
T 3c1m_A 317 NVALINIFGAGMVGVSGTAARIFKALGEEEVNVILISQGSSET--NI-SLVVSEE--------DVDKALKALKREFGD-- 383 (473)
T ss_dssp EEEEEEEEECSSSCHHHHHHHHHHHHHHTTCCEEEEEECCTTC--CE-EEEEEGG--------GHHHHHHHHHHHHCC--
T ss_pred CeEEEEEecCCCCCCcCHHHHHHHHHHHcCCcEEEEEecCCCC--EE-EEEEech--------HHHHHHHHHHHHHhh--
Confidence 5678888851 5678999999999999999998655534222 22 4666541 123343445444411
Q ss_pred ccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEec---CcccHHHH
Q 015010 187 ISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQ---DHKGLIYD 263 (414)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~---DrpGLL~~ 263 (414)
+ .+..+. .. . .-..+.++ .+...|.|.+. ++||.+++
T Consensus 384 -----------~--------------~~~~~~-------~~---~-~~~~v~~~----~~~a~vsvVG~gm~~~~Gvaak 423 (473)
T 3c1m_A 384 -----------F--------------GKKSFL-------NN---N-LIRDVSVD----KDVCVISVVGAGMRGAKGIAGK 423 (473)
T ss_dssp -----------------------------CTT-------SC---C-CEEEEEEE----EEEEEEEEECTTTTTCTTHHHH
T ss_pred -----------h--------------cccccc-------cc---c-ccceEEEe----CCcEEEEEEecCCCCChhHHHH
Confidence 0 000000 00 0 00123332 24567888885 58999999
Q ss_pred HHHHHHhCCceEE
Q 015010 264 MMRTLKDYNTQVS 276 (414)
Q Consensus 264 i~~~L~~~~l~I~ 276 (414)
+..+|++.|+||.
T Consensus 424 ~f~aL~~~~InI~ 436 (473)
T 3c1m_A 424 IFTAVSESGANIK 436 (473)
T ss_dssp HHHHHHHHTCCCC
T ss_pred HHHHHHHCCCCEE
Confidence 9999999999995
No 65
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=79.03 E-value=3 Score=41.35 Aligned_cols=47 Identities=19% Similarity=0.113 Sum_probs=40.1
Q ss_pred eeEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCC
Q 015010 340 NPVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEAD 393 (414)
Q Consensus 340 ~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~ 393 (414)
..|-+.-+|+||.|.+|+.+|.+.|+||..---.| .|+- -|-+.|.+
T Consensus 344 ~r~~~~h~n~p~~~~~i~~~~~~~~~ni~~~~~~~--~~~~-----~y~~~d~~ 390 (416)
T 3k5p_A 344 TRFMHVHENRPGILNSLMNVFSHHHINIASQFLQT--DGEV-----GYLVMEAD 390 (416)
T ss_dssp EEEEEEECCCTTHHHHHHHHHHHTTCCEEEEEEEE--CSSC-----EEEEEEEC
T ss_pred eEEEEEecCCccHHHHHHHHHHHcCCCHHHHhccC--CCce-----EEEEEEec
Confidence 47888899999999999999999999999988888 8886 34455665
No 66
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=75.52 E-value=2.2 Score=36.03 Aligned_cols=98 Identities=13% Similarity=0.075 Sum_probs=59.3
Q ss_pred CeEEEEEEe---cCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCC
Q 015010 246 SHTLIQILG---QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRP 322 (414)
Q Consensus 246 ~~t~v~V~~---~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~ 322 (414)
+.+.|+|.+ +++||..+++..+|+++|++|.. |.++ . ..=.|.++.. ...+++.+.| ...
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~--I~~s--~--~~Isf~v~~~-------~~~~~il~~l----~~~ 79 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM--VATS--E--VGVSLTIDND-------KNLPDIVRAL----SDI 79 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC--EECC--S--SEEEEEESCC-------TTHHHHHHHH----TTT
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE--EEec--C--CEEEEEECCh-------HHHHHHHHHH----hcc
Confidence 356788875 57899999999999999999985 5422 1 1234666411 1223333333 211
Q ss_pred cceeeecCCCCceeeeeeeEEEEeC---CccchHHHHHHHHHhCCceEEEE
Q 015010 323 LRVAVVNRGPDAELLVANPVELSGR---GRPLVFYDITLALKILSISIFSV 370 (414)
Q Consensus 323 ~~~~~~~~~~~~~v~~~~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~A 370 (414)
..+... .+ -..|.|.|. ++||+..++-.+|. |++|..-
T Consensus 80 ~~v~~~-~~-------~a~vsvvG~gm~~~~gv~a~~f~aL~--~Ini~~i 120 (157)
T 3mah_A 80 GDVTVD-KD-------MVIICIVGDMEWDNVGFEARIINALK--GVPVRMI 120 (157)
T ss_dssp EEEEEE-EE-------EEEEEEEC------CCHHHHHHHTTT--TSCCSEE
T ss_pred CeEEEe-CC-------eEEEEEECCCcccCccHHHHHHHHhC--CCCeEEE
Confidence 111100 00 126666665 68999999999999 9998764
No 67
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=72.75 E-value=2.8 Score=42.02 Aligned_cols=33 Identities=39% Similarity=0.293 Sum_probs=27.9
Q ss_pred eeeeEEEEeCCccchHHHHHHHHHhCCceEEEE
Q 015010 338 VANPVELSGRGRPLVFYDITLALKILSISIFSV 370 (414)
Q Consensus 338 ~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A 370 (414)
-..-+-+...|+||+|.+|+.+|.++|+||.+.
T Consensus 358 ~~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~~ 390 (444)
T 3mtj_A 358 TAYYLRLRAFDRPGVLADITRILADSSISIDAM 390 (444)
T ss_dssp EEEEEEEEEC-CCHHHHHHHHHHHHTTCCEEEE
T ss_pred eeeEEEEEecCcccHHHHHHHHHHhcCCceeEE
Confidence 334677889999999999999999999999874
No 68
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=68.00 E-value=10 Score=37.51 Aligned_cols=69 Identities=12% Similarity=0.155 Sum_probs=46.1
Q ss_pred CCeEEEEEEecCcccHHHHHHHHHHhCCceEEeEEEEEeeCCC-EEEEEEEEecCCCCCCChHHHHHHHHHHHHH
Q 015010 245 PSHTLIQILGQDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGN-CEVDLFIMQADGKKIVDPSKQDALCSRLRME 318 (414)
Q Consensus 245 ~~~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~-~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~ 318 (414)
...|.|.+..+|+||-|+++...|+.+|+|+.+ |.|..... ...=.|+|+-+ . .. ....++..+.|+..
T Consensus 32 ~dKTSLiFsl~n~pGAL~~~L~~Fa~~gINLTk--IESRPsk~~~~eY~FfVD~e-h-~~-d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 32 NGAISLIFSLKEEVGALAKVLRLFEENDINLTH--IESRPSRLNKDEYEFFTYLD-K-RT-KPVLGSIIKSLRND 101 (429)
T ss_dssp SCCEEEEEEEECCTTHHHHHHHHHHTTTCCTTS--EEEEECSSCTTEEEEEECBC-G-GG-HHHHHHHHHHHHHT
T ss_pred CCeEEEEEEeCCCccHHHHHHHHHHHcCCceEE--EEeeecCCCCccEEEEEEEe-e-CC-CHHHHHHHHHHHhh
Confidence 345677777899999999999999999999995 77654432 34456788744 3 22 23334444444443
No 69
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=66.24 E-value=5.4 Score=39.87 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=27.2
Q ss_pred eEEEEEEecCcccHHHHHHHHHHhCCceEEe
Q 015010 247 HTLIQILGQDHKGLIYDMMRTLKDYNTQVSY 277 (414)
Q Consensus 247 ~t~v~V~~~DrpGLL~~i~~~L~~~~l~I~~ 277 (414)
.+-+.+...|+||.|.+|+.+|.+++++|.+
T Consensus 359 ~yy~r~~~~d~~gvl~~i~~~~~~~~isi~~ 389 (444)
T 3mtj_A 359 AYYLRLRAFDRPGVLADITRILADSSISIDA 389 (444)
T ss_dssp EEEEEEEEC-CCHHHHHHHHHHHHTTCCEEE
T ss_pred eeEEEEEecCcccHHHHHHHHHHhcCCceeE
Confidence 3458888999999999999999999999986
No 70
>2cdq_A Aspartokinase; aspartate kinase, amino acid metabolism, ACT domain, alloste S-adenosylmethionine, lysine, allosteric effector, plant; HET: TAR SAM LYS; 2.85A {Arabidopsis thaliana} SCOP: c.73.1.3 d.58.18.10 d.58.18.10
Probab=63.37 E-value=1.2e+02 Score=30.69 Aligned_cols=140 Identities=13% Similarity=0.194 Sum_probs=78.7
Q ss_pred CeEEEEEEE--ecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHHHcccc
Q 015010 109 DVFLLKFWC--FQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAVLGKTL 186 (414)
Q Consensus 109 ~~~~i~v~~--~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~l~~~~ 186 (414)
+.+.|+|.+ -.+++|.+++|..+|+++|+||.-- .|+ ...+ .|.|........+ .+.+.|+..+..
T Consensus 340 ~~~~I~i~~~~m~~~~g~~~~if~~la~~~I~vd~I--~ss--e~si-s~~v~~~~~~~~~-----~~~~~l~~~~~e-- 407 (510)
T 2cdq_A 340 NVTMLDIASTRMLGQVGFLAKVFSIFEELGISVDVV--ATS--EVSI-SLTLDPSKLWSRE-----LIQQELDHVVEE-- 407 (510)
T ss_dssp EEEEEEEECGGGTTCTTHHHHHHHHHHHTTCCEEEE--EEE--TTEE-EEEECCGGGSSSC-----CCHHHHHHHHHH--
T ss_pred CeEEEEEEcCCCCCcccHHHHHHHHHHHcCCcEEEE--EeC--CCeE-EEEEechHhhhhh-----HHHHHHHHHHHH--
Confidence 467778874 1578999999999999999999854 342 2222 3666532110000 011112222211
Q ss_pred ccccccCCCCccccccCCCCCCchhhHhhhhccCCCCCCCCCCCCCCCeEEEEecCCCCCeEEEEEEec--CcccHHHHH
Q 015010 187 ISCEIELPGPEITACCHGSSFLPSAITDEMFSLELPAEQPNGFLASAPVSIAVDNSFSPSHTLIQILGQ--DHKGLIYDM 264 (414)
Q Consensus 187 ~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~V~v~~~~~~~~t~v~V~~~--DrpGLL~~i 264 (414)
.. .-..|.++ .+...|.|.+. ..||+.+++
T Consensus 408 -----------------------------l~---------------~~~~v~~~----~~~a~VsiVG~m~~~~Gvaa~~ 439 (510)
T 2cdq_A 408 -----------------------------LE---------------KIAVVNLL----KGRAIISLIGNVQHSSLILERA 439 (510)
T ss_dssp -----------------------------HT---------------TTSEEEEE----EEEEEEEEEECGGGHHHHHHHH
T ss_pred -----------------------------hC---------------CCCeEEEe----CCcEEEEEEEECCCChhHHHHH
Confidence 00 00023332 23457777776 788999999
Q ss_pred HHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHc
Q 015010 265 MRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELL 320 (414)
Q Consensus 265 ~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~ 320 (414)
..+|++.|+||.. |+ ......-=.|.|+ .+..++..+.|.+++.
T Consensus 440 f~aL~~~~InI~m--Is--qGsSei~Is~vV~--------~~d~~~Av~aLH~~f~ 483 (510)
T 2cdq_A 440 FHVLYTKGVNVQM--IS--QGASKVNISFIVN--------EAEAEGCVQALHKSFF 483 (510)
T ss_dssp HHHHHHHTCCCSE--EE--ECTTCSEEEEEEE--------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEE--EE--ecCCcceEEEEEe--------HHHHHHHHHHHHHHHh
Confidence 9999999999984 54 2222233345664 2334444455555553
No 71
>3r6a_A Uncharacterized protein; PSI biology, structural genomics, NEW YORK structural genomi research consortium, putative glyoxalase I; 1.76A {Methanosarcina mazei}
Probab=43.81 E-value=48 Score=26.74 Aligned_cols=39 Identities=13% Similarity=0.086 Sum_probs=29.9
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+.++.+.|.+.|+.+...-... ..++ .||+.|++|+.+.
T Consensus 76 ~d~~~~~l~~~G~~v~~~p~~~--~~G~-----~~~~~DPdG~~ie 114 (144)
T 3r6a_A 76 LDKFKTFLEENGAEIIRGPSKV--PTGR-----NMTVRHSDGSVIE 114 (144)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE--TTEE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCEEecCCccC--CCce-----EEEEECCCCCEEE
Confidence 6778889999999987665544 2334 5899999999765
No 72
>3rri_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=41.43 E-value=32 Score=26.79 Aligned_cols=46 Identities=17% Similarity=0.039 Sum_probs=31.2
Q ss_pred chHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 351 LVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 351 GLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.=+..+.+.|.+.|+.+...-.... .|. .+....||+.|++|+.+.
T Consensus 79 ~d~~~~~~~l~~~G~~~~~~p~~~~-~~~-~~~~~~~~~~DPdGn~ie 124 (135)
T 3rri_A 79 KHFDNLYKLAKQRGIPFYHDLSRRF-EGL-IEEHETFFLIDPSNNLLE 124 (135)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEEES-TTS-TTCEEEEEEECTTCCEEE
T ss_pred HhHHHHHHHHHHcCCceecCccccc-CCC-CCceEEEEEECCCCCEEE
Confidence 3477888889999999876555420 121 112347999999999764
No 73
>4g6x_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.73A {Catenulispora acidiphila}
Probab=38.84 E-value=39 Score=27.36 Aligned_cols=39 Identities=18% Similarity=0.063 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+....+.|++.|+.+...-... .+.+ .+|++|++|+.+.
T Consensus 109 vda~~~~l~~~Gv~~~~~p~~~--~~g~-----~~~f~DPdGn~ie 147 (155)
T 4g6x_A 109 IAAEYERLSALGVRFTQEPTDM--GPVV-----TAILDDTCGNLIQ 147 (155)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC--SSCE-----EEEEECSSSCEEE
T ss_pred hhhhhhHHhcCCcEEeeCCEEc--CCeE-----EEEEECCCCCEEE
Confidence 6677888999999998776555 4555 5789999999764
No 74
>3kol_A Oxidoreductase, glyoxalase/bleomycin resistance protein/dioxygenase; metal ION binding, NYSGXRC, PSI2, structural genomics; 1.90A {Nostoc punctiforme pcc 73102}
Probab=37.93 E-value=43 Score=26.52 Aligned_cols=39 Identities=18% Similarity=0.186 Sum_probs=29.0
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+..+.+.|.+.|+.+...-... .+.+ .||+.|++|+.+.
T Consensus 109 ~~~~~~~l~~~G~~~~~~~~~~--~~g~-----~~~~~DPdG~~ie 147 (156)
T 3kol_A 109 FDRAVTVIGENKIAIAHGPVTR--PTGR-----GVYFYDPDGFMIE 147 (156)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC---CCE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHCCCccccCceec--CCcc-----EEEEECCCCCEEE
Confidence 6777888999999987655444 3333 6899999998763
No 75
>2dnr_A Synaptojanin-1; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.73 E-value=46 Score=25.43 Aligned_cols=55 Identities=16% Similarity=0.091 Sum_probs=36.1
Q ss_pred CCCceEEEeecCCCCCeeEEEEeCCCCCChhHHHHHHHHHcCcEEEEEEEEecCCEEEEEEEEEcCCC
Q 015010 4 MYEDVVVISQAEKPGDCTVITVNCPDKTGLGCDLCRIILLFGLSISRGDLSKDGKWCYLVFWVVGKPT 71 (414)
Q Consensus 4 ~~~~~v~~~~~~~~~~~~~v~v~~~d~~Gll~~~~~vl~~~~L~I~~a~i~tdg~~~~d~f~v~~~~g 71 (414)
|||+.|+|..-++..... .--.-|..++.+.+..+| .|..++|-.|-+ ||+..++
T Consensus 5 Ppd~tv~V~~~~~~~~~~------~fd~~l~~~L~~~F~~~G-~Vi~vr~~~d~~------fVtF~d~ 59 (91)
T 2dnr_A 5 SSGGTVLVSIKSSLPENN------FFDDALIDELLQQFASFG-EVILIRFVEDKM------WVTFLEG 59 (91)
T ss_dssp CSSCEEEEEEECSSTTTC------SCCHHHHHHHHHHHHTTC-CEEEEEECSSSE------EEEESSH
T ss_pred CCCCeEEEEeccCccccc------cCCHHHHHHHHHHHHhCC-CeEEEEEecCCE------EEEECCh
Confidence 678888877732211000 001247789999999999 899999988774 5665544
No 76
>3g12_A Putative lactoylglutathione lyase; glyoxalase, bleomycin resistance, PSI-2, NYSGXRC, structural genomics; 2.58A {Bdellovibrio bacteriovorus HD100}
Probab=36.04 E-value=67 Score=25.02 Aligned_cols=47 Identities=6% Similarity=0.013 Sum_probs=33.4
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCce-EEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 341 PVELSGRGRPLVFYDITLALKILSIS-IFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~-I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.+-+...| +....+.|.+.|+. +...-... ..+. .||+.|++|+.+.
T Consensus 69 ~l~f~v~d----vd~~~~~l~~~G~~~~~~~p~~~--~~G~-----~~~~~DPdGn~ie 116 (128)
T 3g12_A 69 QLGFQITD----LEKTVQELVKIPGAMCILDPTDM--PDGK-----KAIVLDPDGHSIE 116 (128)
T ss_dssp EEEEEESC----HHHHHHHHTTSTTCEEEEEEEEC--C-CE-----EEEEECTTCCEEE
T ss_pred EEEEEeCC----HHHHHHHHHHCCCceeccCceeC--CCcc-----EEEEECCCCCEEE
Confidence 45566677 88888999999999 76543333 2222 2999999999764
No 77
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=36.01 E-value=64 Score=26.41 Aligned_cols=34 Identities=12% Similarity=0.277 Sum_probs=27.4
Q ss_pred CeEEEEEEec---CcccHHHHHHHHHHhCCceEEeEEEE
Q 015010 246 SHTLIQILGQ---DHKGLIYDMMRTLKDYNTQVSYGRFF 281 (414)
Q Consensus 246 ~~t~v~V~~~---DrpGLL~~i~~~L~~~~l~I~~A~I~ 281 (414)
.+-.++|.+. |-.|+++.++..|++.|++|.. |+
T Consensus 61 ~wr~i~v~~~l~~~~vGilA~is~pLA~agIsif~--iS 97 (134)
T 1zhv_A 61 GWSCFKFQGPFAFDETGIVLSVISPLSTNGIGIFV--VS 97 (134)
T ss_dssp EEEEEEECSCCCCSSCCHHHHHHHHHHTTTCCCEE--EE
T ss_pred CeEEEEEecCCCccHHHHHHHHHHHHHhCCCCeEE--EE
Confidence 3445666655 7789999999999999999994 65
No 78
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=35.64 E-value=2.3e+02 Score=26.13 Aligned_cols=91 Identities=15% Similarity=0.100 Sum_probs=67.9
Q ss_pred cCcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceeeecCCCCc
Q 015010 255 QDHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVAVVNRGPDA 334 (414)
Q Consensus 255 ~DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~~~~~~ 334 (414)
+--|..+.+++..+.++|..... +. .|.| ...|.+...+.+.|++.+.....+
T Consensus 146 ~~~~~~~~~~~~~~~~~G~~~i~--l~-DT~G---------------~~~P~~v~~lv~~l~~~~~~~~~~--------- 198 (293)
T 3ewb_X 146 RSDRAFLIEAVQTAIDAGATVIN--IP-DTVG---------------YTNPTEFGQLFQDLRREIKQFDDI--------- 198 (293)
T ss_dssp GSCHHHHHHHHHHHHHTTCCEEE--EE-CSSS---------------CCCHHHHHHHHHHHHHHCTTGGGS---------
T ss_pred CCCHHHHHHHHHHHHHcCCCEEE--ec-CCCC---------------CCCHHHHHHHHHHHHHhcCCccCc---------
Confidence 34578899999999999987652 33 3444 345777788877777665321111
Q ss_pred eeeeeeeEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCce
Q 015010 335 ELLVANPVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDR 380 (414)
Q Consensus 335 ~v~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~ 380 (414)
.|++.++|-.|+=..=+-+--+.|+.+..+-|.- .|++
T Consensus 199 ------~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~G--lGer 236 (293)
T 3ewb_X 199 ------IFASHCHDDLGMATANALAAIENGARRVEGTING--IGER 236 (293)
T ss_dssp ------EEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGG--CCTT
T ss_pred ------eEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccc--cccc
Confidence 7899999999997777777778999999999988 8875
No 79
>1phz_A Protein (phenylalanine hydroxylase); aromatic amino acid hydroxylase, phosphorylation, intrasteric regulation, allosteric regulation; 2.20A {Rattus norvegicus} SCOP: d.58.18.3 d.178.1.1 PDB: 2phm_A
Probab=31.84 E-value=87 Score=30.87 Aligned_cols=69 Identities=16% Similarity=0.158 Sum_probs=45.6
Q ss_pred CeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCCCeEEEEEEEecCCCCCCCHHHHHHHHHHHHHH
Q 015010 109 DVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPDGRVMDLFFITDTRELLHTRKRREETIHHLEAV 181 (414)
Q Consensus 109 ~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~g~~~d~f~V~~~~~~~~~~~~~~~i~~~L~~~ 181 (414)
+.+.|.+.. +|+||-|+++-.+|+.+|+|+..-.-.-+.++..--.|+|.-. . . +.....+.-+.|+..
T Consensus 33 dKTSLiFsl-~n~pGAL~~~L~~Fa~~gINLTkIESRPsk~~~~eY~FfVD~e-h-~-~d~~v~~AL~eL~~~ 101 (429)
T 1phz_A 33 GAISLIFSL-KEEVGALAKVLRLFEENDINLTHIESRPSRLNKDEYEFFTYLD-K-R-TKPVLGSIIKSLRND 101 (429)
T ss_dssp CCEEEEEEE-ECCTTHHHHHHHHHHTTTCCTTSEEEEECSSCTTEEEEEECBC-G-G-GHHHHHHHHHHHHHT
T ss_pred CeEEEEEEe-CCCccHHHHHHHHHHHcCCceEEEEeeecCCCCccEEEEEEEe-e-C-CCHHHHHHHHHHHhh
Confidence 467888888 9999999999999999999997554444333333345888543 2 1 333344444445544
No 80
>3r4q_A Lactoylglutathione lyase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.51A {Agrobacterium tumefaciens}
Probab=29.63 E-value=39 Score=27.62 Aligned_cols=50 Identities=8% Similarity=0.032 Sum_probs=32.7
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 341 PVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.+-+...++. =+..+.+.|.+.|+.+....-.. .|.+ .||+.|++|+.+.
T Consensus 79 hi~f~V~~~~-dld~~~~~l~~~G~~~~~~~~~~--~g~~-----~~~~~DPdG~~ie 128 (160)
T 3r4q_A 79 HFCFYADDKA-EVDEWKTRFEALEIPVEHYHRWP--NGSY-----SVYIRDPAGNSVE 128 (160)
T ss_dssp EEEEEESSHH-HHHHHHHHHHTTTCCCCEEEECT--TSCE-----EEEEECTTCCEEE
T ss_pred EEEEEeCCHH-HHHHHHHHHHHCCCEEecccccc--CCcE-----EEEEECCCCCEEE
Confidence 3444443322 36777788899999987433223 3544 6999999999664
No 81
>1ufw_A Synaptojanin 2; RNP domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=29.29 E-value=17 Score=28.07 Aligned_cols=56 Identities=13% Similarity=0.100 Sum_probs=35.8
Q ss_pred CCCceEEEeecCCCCCeeEEEEeCCCCCChhHHHHHHHHHcCcEEEEEEEEecCCEEEEEEEEEcCCC
Q 015010 4 MYEDVVVISQAEKPGDCTVITVNCPDKTGLGCDLCRIILLFGLSISRGDLSKDGKWCYLVFWVVGKPT 71 (414)
Q Consensus 4 ~~~~~v~~~~~~~~~~~~~v~v~~~d~~Gll~~~~~vl~~~~L~I~~a~i~tdg~~~~d~f~v~~~~g 71 (414)
|||..|+|...++..+-. ..--.-|..++.+.|..+| .|..++|-+|. -||+..++
T Consensus 13 PpD~Tv~V~~~~~~~~~~-----~~fd~~l~~~L~~~F~~~G-~Vilvr~v~d~------~fVtF~d~ 68 (95)
T 1ufw_A 13 PLDATVVVNLQSPTLEEK-----NEFPEDLRTELMQTLGSYG-TIVLVRINQGQ------MLVTFADS 68 (95)
T ss_dssp CTTCEEEEEESSCCHHHH-----HSCCHHHHHHHHHHHHHHS-CCSEEEEETTE------EEEECSCS
T ss_pred CCCCeEEEEecCCccccc-----ccCCHHHHHHHHHHHHHCC-CEEEEEEecCc------EEEEEcCh
Confidence 667777777643210000 0001247789999999999 78888888876 45776666
No 82
>3zw5_A Glyoxalase domain-containing protein 5; lyase; 1.60A {Homo sapiens}
Probab=29.01 E-value=59 Score=25.91 Aligned_cols=42 Identities=19% Similarity=0.233 Sum_probs=30.3
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLE 397 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l 397 (414)
+..+.+.|.+.|+.+....... .|+. .....||+.|++|+.+
T Consensus 101 l~~~~~~l~~~G~~~~~~p~~~--~~~~-g~~~~~~~~DPdGn~i 142 (147)
T 3zw5_A 101 LEEMIQHLKACDVPIEEGPVPR--TGAK-GPIMSIYFRDPDRNLI 142 (147)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEE--EETT-EEEEEEEEECTTCCEE
T ss_pred HHHHHHHHHHcCCceeeCcccc--cCCC-CceEEEEEECCCCCEE
Confidence 6777888999999987665544 3332 0334799999999865
No 83
>1ecs_A Bleomycin resistance protein; arm-exchange, antibiotic inhibitor; HET: PG4; 1.70A {Klebsiella pneumoniae} SCOP: d.32.1.2 PDB: 1ewj_A* 1niq_B* 1mh6_A
Probab=28.93 E-value=1e+02 Score=23.55 Aligned_cols=40 Identities=15% Similarity=0.030 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCceE-------EEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISI-------FSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I-------~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+.++.+.|.+.|+.+ ...-... ..|.+ .||+.|++|+.+.
T Consensus 69 v~~~~~~l~~~G~~~~~~~~~~~~~~~~~-~~g~~-----~~~~~DPdG~~ie 115 (126)
T 1ecs_A 69 LAEFYRQCKSVGIQETSSGYPRIHAPELQ-GWGGT-----MAALVDPDGTLLR 115 (126)
T ss_dssp HHHHHHHHHHTTCCBCSSSSSEEEEEEEC-TTSSE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHCCCccccccCccccCCccc-CcccE-----EEEEECCCCCEEE
Confidence 778888999999984 3332222 13444 6899999999764
No 84
>3ey7_A Biphenyl-2,3-DIOL 1,2-dioxygenase III-related protein; integron cassette protein mobIle metagenome structural genomics, oxidoreductase, PSI-2; HET: MSE; 1.60A {Vibrio cholerae} PDB: 3ey8_A*
Probab=28.91 E-value=62 Score=24.67 Aligned_cols=42 Identities=17% Similarity=0.249 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCc-eeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHD-REWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~-~~~~~d~Fyv~d~~g~~l~ 398 (414)
+..+.+.|.+.|+.+...-... .+. . ....||+.|++|+.+.
T Consensus 84 ~~~~~~~l~~~G~~~~~~~~~~--~~~~g--~~~~~~~~DPdG~~ie 126 (133)
T 3ey7_A 84 LSDAMKHVEDQGVTIMEGPVKR--TGAQG--AITSFYFRDPDGNLIE 126 (133)
T ss_dssp HHHHHHHHHHTTCCCCEEEEEE--EETTE--EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCccccCCccc--cCCCC--CeEEEEEECCCCCEEE
Confidence 7788889999999987765444 332 2 3357999999998653
No 85
>2rbb_A Glyoxalase/bleomycin resistance protein/dioxygena; structural genomics, PSI-2, PROT structure initiative; 1.82A {Burkholderia phytofirmans}
Probab=28.79 E-value=73 Score=24.96 Aligned_cols=40 Identities=8% Similarity=0.020 Sum_probs=28.2
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+.++.+.|.+.|+.+...-... ..|.+ .||++|++|+.+.
T Consensus 89 v~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~ie 128 (141)
T 2rbb_A 89 VDKLVPVAIAAGATLIKAPYET-YYHWY-----QAVLLDPERNVFR 128 (141)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC-TTSEE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCeEecCcccc-CCccE-----EEEEECCCCCEEE
Confidence 5667778889999887654433 12333 6899999998764
No 86
>3sk2_A EHPR; antibiotic resistance, griseoluteate-binding protein; HET: GRI; 1.01A {Pantoea agglomerans} PDB: 3sk1_A*
Probab=28.71 E-value=75 Score=24.61 Aligned_cols=48 Identities=10% Similarity=0.093 Sum_probs=30.9
Q ss_pred EEEEeCCccchHHHHHHHHHh---CCceEEEEEEecceeCceeeEEEEEEEEcCCCCCC
Q 015010 342 VELSGRGRPLVFYDITLALKI---LSISIFSVEIGRYMIHDREWEVYRILLDEADGNLE 397 (414)
Q Consensus 342 lev~~~DRpGLL~dIt~~l~~---~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l 397 (414)
+-+...|+ -=+..+.+.|.+ .|+.+...-... ..| + .||+.|++|+.+
T Consensus 76 ~~~~v~~~-~dv~~~~~~l~~~~~~G~~~~~~p~~~-~~g-~-----~~~~~DPdGn~i 126 (132)
T 3sk2_A 76 IGIMLPTG-EDVDKLFNEWTKQKSHQIIVIKEPYTD-VFG-R-----TFLISDPDGHII 126 (132)
T ss_dssp EEEEESSH-HHHHHHHHHHHHCSSSCCEEEEEEEEE-TTE-E-----EEEEECTTCCEE
T ss_pred EEEEeCCH-HHHHHHHHHHHhhhcCCCEEeeCCccc-Cce-E-----EEEEECCCCCEE
Confidence 33444443 235566677788 999987654333 134 4 699999999865
No 87
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=28.53 E-value=3.1e+02 Score=25.70 Aligned_cols=86 Identities=10% Similarity=0.130 Sum_probs=64.9
Q ss_pred cccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEecCCCCCCChHHHHHHHHHHHHHHcCCcceeeecCCCCcee
Q 015010 257 HKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQADGKKIVDPSKQDALCSRLRMELLRPLRVAVVNRGPDAEL 336 (414)
Q Consensus 257 rpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~~~g~~~~~~~~~~~l~~~L~~~l~~~~~~~~~~~~~~~~v 336 (414)
-|..+.+++..+.++|..... +. .|.| +..|.+...+.+.|++.+. .+
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~--l~-DT~G---------------~~~P~~v~~lv~~l~~~~p---~~----------- 214 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIF--LP-DTLG---------------VLSPEETFQGVDSLIQKYP---DI----------- 214 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEE--EE-CTTC---------------CCCHHHHHHHHHHHHHHCT---TS-----------
T ss_pred CHHHHHHHHHHHHHcCCCEEE--Ee-cCCC---------------CcCHHHHHHHHHHHHHhcC---CC-----------
Confidence 468889999999999986552 32 3444 2357788888888776652 12
Q ss_pred eeeeeEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCce
Q 015010 337 LVANPVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDR 380 (414)
Q Consensus 337 ~~~~~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~ 380 (414)
.|++.++|-.|+=..=+-+--+.|+.+..+-|.- .|++
T Consensus 215 ----~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~G--lG~~ 252 (337)
T 3ble_A 215 ----HFEFHGHNDYDLSVANSLQAIRAGVKGLHASING--LGER 252 (337)
T ss_dssp ----CEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGG--CSST
T ss_pred ----eEEEEecCCcchHHHHHHHHHHhCCCEEEEeccc--cccc
Confidence 7899999999997777777778899999999988 8875
No 88
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=28.38 E-value=1.4e+02 Score=24.29 Aligned_cols=35 Identities=14% Similarity=0.149 Sum_probs=28.0
Q ss_pred CCeEEEEEEe---cCcccHHHHHHHHHHhCCceEEeEEEE
Q 015010 245 PSHTLIQILG---QDHKGLIYDMMRTLKDYNTQVSYGRFF 281 (414)
Q Consensus 245 ~~~t~v~V~~---~DrpGLL~~i~~~L~~~~l~I~~A~I~ 281 (414)
..+..++|.+ -|-.|+++.++..|++.|++|.- |+
T Consensus 69 ~~wr~i~l~~~~~l~~vGi~a~is~~LA~agIsif~--iS 106 (133)
T 1zvp_A 69 ALFSLITLTVHSSLEAVGLTAAFATKLAEHGISANV--IA 106 (133)
T ss_dssp SCEEEEEEECCC--CCSCHHHHHHHHHHHTTCCCEE--EE
T ss_pred CCeEEEEEeccCCccHHHHHHHHHHHHHhCCCCcEE--EE
Confidence 4555666655 68899999999999999999994 55
No 89
>3e5d_A Putative glyoxalase I; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 2.70A {Listeria monocytogenes str}
Probab=27.65 E-value=82 Score=23.73 Aligned_cols=39 Identities=13% Similarity=-0.039 Sum_probs=27.5
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLE 397 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l 397 (414)
+..+.+.|.+.|+.+...-... ..|.+ .||+.|++|+.+
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~i 123 (127)
T 3e5d_A 85 VDELTEKLRQDGFAIAGEPRMT-GDGYY-----ESVVLDPEGNRI 123 (127)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEC-TTSCE-----EEEEECTTSCEE
T ss_pred HHHHHHHHHHcCCeEecCcccC-CCCcE-----EEEEECCCCCEE
Confidence 5567778889999988754333 12333 589999999865
No 90
>3rhe_A NAD-dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, SGX; 2.05A {Legionella pneumophila}
Probab=27.00 E-value=75 Score=25.58 Aligned_cols=49 Identities=10% Similarity=-0.038 Sum_probs=32.1
Q ss_pred EEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 342 VELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 342 lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+-+...|+ -=+..+.+.|.+.|+.|...-.... .| + .||+.|++|+.+.
T Consensus 71 l~f~v~d~-~dvd~~~~~l~~~G~~i~~~p~~~~-~G-~-----~~~~~DPdG~~ie 119 (148)
T 3rhe_A 71 LSFQVNSN-EMVDEIHRQWSDKEISIIQPPTQMD-FG-Y-----TFVGVDPDEHRLR 119 (148)
T ss_dssp EEEECSCH-HHHHHHHHHHHHTTCCEEEEEEEET-TE-E-----EEEEECTTCCEEE
T ss_pred EEEEcCCH-HHHHHHHHHHHhCCCEEEeCCeecC-CC-c-----EEEEECCCCCEEE
Confidence 44444442 3356667778899999876544331 23 3 6999999999765
No 91
>3bqx_A Glyoxalase-related enzyme; VOC superfamily, PSI-2, STRU genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.40A {Fulvimarina pelagi}
Probab=26.58 E-value=84 Score=25.00 Aligned_cols=40 Identities=10% Similarity=-0.013 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+..+.+.|.+.|+.+...-... ..|.+ .||++|++|+.+.
T Consensus 83 v~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~ie 122 (150)
T 3bqx_A 83 VAPLMERLVAAGGQLLRPADAP-PHGGL-----RGYVADPDGHIWE 122 (150)
T ss_dssp HHHHHHHHHHTTCEEEEEEECC-TTSSE-----EEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCEEecCCccc-CCCCE-----EEEEECCCCCEEE
Confidence 6677788889999987653333 12444 6899999998764
No 92
>3itw_A Protein TIOX; bleomycin resistance fold, bisintercalator, solvent-exposed residue, thiocoraline, protein binding, peptide binding Pro; 2.15A {Micromonospora SP}
Probab=26.23 E-value=84 Score=24.38 Aligned_cols=47 Identities=13% Similarity=0.023 Sum_probs=32.4
Q ss_pred EEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 342 VELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 342 lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+.+...| +..+-+.|.+.|+.|...-..+ ..|.+ .||+.|++|+.+.
T Consensus 72 ~~~~v~d----v~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~ie 118 (137)
T 3itw_A 72 VIVWVSD----VDEHFMRSTAAGADIVQPLQDK-PWGLR-----QYLVRDLEGHLWE 118 (137)
T ss_dssp EEEEESC----HHHHHHHHHHTTCEEEEEEEEE-TTTEE-----EEEEECSSSCEEE
T ss_pred EEEEeCC----HHHHHHHHHHcCCeeccCcccc-CCCcE-----EEEEECCCCCEEE
Confidence 3444445 6677788899999987654444 12434 6999999999665
No 93
>1r9c_A Glutathione transferase; fosfomycin resistance protein, Mn binding, antibiotic resist transferase; 1.83A {Mesorhizobium loti} SCOP: d.32.1.2
Probab=26.22 E-value=16 Score=29.03 Aligned_cols=55 Identities=11% Similarity=-0.065 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC-----chHHHHHHHHHHccC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP-----RNKIEDLVRKILMGW 413 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~-----~~~~~~~i~~~L~~~ 413 (414)
+..+.+.|.+.|+.+....... ..+. ..||+.|++|+.+. .+..++..++.|..|
T Consensus 79 ~~~~~~~l~~~G~~~~~~~~~~-~~~~-----~~~~~~DPdG~~iel~~~~~~~~l~~~~~~~~~~ 138 (139)
T 1r9c_A 79 FDRYAERVGKLGLDMRPPRPRV-EGEG-----RSIYFYDDDNHMFELHTGTLTERLARKAKGLEAA 138 (139)
T ss_dssp HHHHHHHHHHHTCCBCCCCC------C-----CEEEEECTTSCEEEEECCCHHHHHHC--------
T ss_pred HHHHHHHHHHCCCcccCCcccC-CCCe-----EEEEEECCCCCEEEEEeCChhHHHHHHHHhhhhc
Confidence 5667778888898875431111 0122 36999999999775 123457777776655
No 94
>2r6u_A Uncharacterized protein; structural genomics, PSI-2, RHA04853, MCSG, protein structur initiative, midwest center for structural genomics; 1.50A {Rhodococcus SP}
Probab=26.16 E-value=84 Score=25.22 Aligned_cols=40 Identities=8% Similarity=0.046 Sum_probs=28.8
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+.++.+.|.+.|+.+....... .| |- ..||+.|++|+.+.
T Consensus 101 ld~~~~~l~~~G~~~~~~~~~~--~~---~g-~~~~~~DPdG~~ie 140 (148)
T 2r6u_A 101 IESALERIESLGGKTVTGRTPV--GN---MG-FAAYFTDSEGNVVG 140 (148)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEE--TT---TE-EEEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCeEecCCeec--CC---CE-EEEEEECCCCCEEE
Confidence 7788888999999987654333 21 01 36899999998764
No 95
>2a4x_A Mitomycin-binding protein; ALFA/beta protein, mitomycin C-binding protein, bleomycin A2, antimicrobial protein; HET: BLM; 1.40A {Streptomyces caespitosus} SCOP: d.32.1.2 PDB: 2a4w_A* 1kmz_A 1kll_A*
Probab=26.11 E-value=88 Score=24.35 Aligned_cols=40 Identities=13% Similarity=0.025 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+..+.+.|.+.|+.+...-... ..|.+ .||++|++|+.+.
T Consensus 85 v~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~ie 124 (138)
T 2a4x_A 85 VDKKYAELVDAGYEGHLKPWNA-VWGQR-----YAIVKDPDGNVVD 124 (138)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEE-TTTEE-----EEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCceeeCCccc-CCCcE-----EEEEECCCCCEEE
Confidence 6677788899999987543332 12333 6899999998663
No 96
>2qqz_A Glyoxalase family protein, putative; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: MSE; 1.92A {Bacillus anthracis str}
Probab=25.89 E-value=44 Score=25.62 Aligned_cols=38 Identities=16% Similarity=0.129 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+.++.+.|.+.|+.+.... .. .|.+ .||++|++|+.+.
T Consensus 83 ~~~~~~~l~~~G~~~~~~~-~~--~g~~-----~~~~~DPdG~~ie 120 (126)
T 2qqz_A 83 IDEFKQELIKQGIEVIDDH-AR--PDVI-----RFYVSDPFGNRIE 120 (126)
T ss_dssp HHHHHHHHHHTTCCCEEEC-SS--TTEE-----EEEEECTTSCEEE
T ss_pred HHHHHHHHHHcCCCccCCC-CC--CCee-----EEEEECCCCCEEE
Confidence 6678888999999887543 22 3433 6899999998653
No 97
>3huh_A Virulence protein STM3117; structural genomics, nysgrc, target 13955A1BCT15P1, dioxygen virulence, PSI-2, protein structure initiative; 1.50A {Salmonella enterica subsp} PDB: 3hnq_A
Probab=24.43 E-value=57 Score=25.98 Aligned_cols=42 Identities=26% Similarity=0.364 Sum_probs=30.6
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeC-ceeeEEEEEEEEcCCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIH-DREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g-~~~~~~d~Fyv~d~~g~~l~ 398 (414)
+..+.+.|.+.|+.+...-... .+ .. ....||+.|++|+.+.
T Consensus 97 l~~~~~~l~~~G~~~~~~p~~~--~~~~g--~~~~~~~~DPdG~~iE 139 (152)
T 3huh_A 97 INDVVSEILQAGISIVEGPVER--TGATG--EIMSIYIRDPDGNLIE 139 (152)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEE--EETTE--EEEEEEEECTTCCEEE
T ss_pred HHHHHHHHHHCCCeEecCCccc--cCCCC--cEEEEEEECCCCCEEE
Confidence 6778888999999987755443 22 22 2357999999999764
No 98
>2i7r_A Conserved domain protein; structural genomics conserved domain, PSI-2, protein structure initiative; 2.20A {Streptococcus pneumoniae} SCOP: d.32.1.2
Probab=23.63 E-value=62 Score=24.39 Aligned_cols=39 Identities=13% Similarity=0.034 Sum_probs=28.3
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLE 397 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l 397 (414)
+..+.+.|.+.|+.+...-... ..|.+ .||+.|++|+.+
T Consensus 74 ~~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~i 112 (118)
T 2i7r_A 74 VDQNYKRLNELGIKVLHGPTVT-DWGTE-----SLLVQGPAGLVL 112 (118)
T ss_dssp HHHHHHHHHHHTCCEEEEEEEC-TTSCE-----EEEEECGGGCEE
T ss_pred HHHHHHHHHHCCCceecCCccc-cCccE-----EEEEECCCccEE
Confidence 7777888899999986644333 13444 689999999865
No 99
>3ghj_A Putative integron gene cassette protein; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.47A {Uncultured bacterium}
Probab=23.60 E-value=66 Score=25.48 Aligned_cols=39 Identities=10% Similarity=0.123 Sum_probs=27.9
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLE 397 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l 397 (414)
+.++.+.|.+.|+.+....... .+. ...||+.|++|+.+
T Consensus 98 ld~~~~~l~~~G~~~~~~~~~~--~~~----~~~~~~~DPdG~~i 136 (141)
T 3ghj_A 98 IEPLKKALESKGVSVHGPVNQE--WMQ----AVSLYFADPNGHAL 136 (141)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEG--GGT----EEEEEEECTTCCEE
T ss_pred HHHHHHHHHHCCCeEeCCcccC--CCC----ceEEEEECCCCCEE
Confidence 7778888999999988322222 332 23699999999865
No 100
>3mah_A Aspartokinase; aspartate kinase, structural genomics, MCSG, transferase, PSI-2; 2.31A {Porphyromonas gingivalis}
Probab=23.14 E-value=47 Score=27.57 Aligned_cols=33 Identities=6% Similarity=-0.000 Sum_probs=27.5
Q ss_pred CeEEEEEEE--ecCCcchHHHHHHHHHhCCCeEEE
Q 015010 109 DVFLLKFWC--FQDRKGLLHDVTEVLCELELTIKR 141 (414)
Q Consensus 109 ~~~~i~v~~--~~Dr~GLl~~i~~~L~~~glnI~~ 141 (414)
+.+.|+|.+ -+++||..+++..+|+++|+||.-
T Consensus 17 ~va~Iti~~~~m~~~~g~~~~if~~La~~~I~vd~ 51 (157)
T 3mah_A 17 GITVIKVKSSNKLLSWHFMRKLFEIFEFYQEPVDM 51 (157)
T ss_dssp EEEEEEEEECTTSCHHHHHHHHHHHHHHTTCCCSC
T ss_pred CEEEEEEEeCCCCCchhHHHHHHHHHHHcCCCEEE
Confidence 467888885 147889999999999999999963
No 101
>1zhv_A Hypothetical protein ATU0741; NESG, ATR8, structural genomics, PSI, protein struc initiative; 1.50A {Agrobacterium tumefaciens str} SCOP: d.58.18.8 d.58.18.8
Probab=23.12 E-value=41 Score=27.58 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=23.5
Q ss_pred CCccchHHHHHHHHHhCCceEEEEEEec
Q 015010 347 RGRPLVFYDITLALKILSISIFSVEIGR 374 (414)
Q Consensus 347 ~DRpGLL~dIt~~l~~~gl~I~~A~I~T 374 (414)
.|-.|+++.|+..|++.||+|+ -|+|
T Consensus 73 ~~~vGilA~is~pLA~agIsif--~iSt 98 (134)
T 1zhv_A 73 FDETGIVLSVISPLSTNGIGIF--VVST 98 (134)
T ss_dssp CSSCCHHHHHHHHHHTTTCCCE--EEEC
T ss_pred ccHHHHHHHHHHHHHhCCCCeE--EEEe
Confidence 3789999999999999999999 4777
No 102
>2pjs_A AGR_C_3564P, uncharacterized protein ATU1953; glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics; 1.85A {Agrobacterium tumefaciens str} SCOP: d.32.1.2
Probab=22.86 E-value=69 Score=24.02 Aligned_cols=39 Identities=15% Similarity=0.180 Sum_probs=28.4
Q ss_pred HHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCC
Q 015010 353 FYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLE 397 (414)
Q Consensus 353 L~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l 397 (414)
+.++.+.|.+.|+.+...-..+ ..|.+ .||++|++|+.+
T Consensus 75 ~~~~~~~l~~~G~~~~~~~~~~-~~g~~-----~~~~~DPdG~~i 113 (119)
T 2pjs_A 75 FDEVHARILKAGLPIEYGPVTE-AWGVQ-----RLFLRDPFGKLI 113 (119)
T ss_dssp HHHHHHHHHHTTCCCSEEEEEC-TTSCE-----EEEEECTTSCEE
T ss_pred HHHHHHHHHHCCCccccCCccC-CCccE-----EEEEECCCCCEE
Confidence 7778888999999886653333 13434 689999999865
No 103
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=22.06 E-value=48 Score=26.47 Aligned_cols=40 Identities=10% Similarity=-0.089 Sum_probs=26.9
Q ss_pred hHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 352 VFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 352 LL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
=+.++.+.+.+.|..+...-... -+. ..||++|++|+.+.
T Consensus 90 ~vd~~~~~~~~~g~~~~~~p~~~--~~~-----~~~~f~DPDGn~iE 129 (149)
T 4gym_A 90 DVDRFADTALGAGGTVARDPMDY--GFM-----YGRSFHDLDGHLWE 129 (149)
T ss_dssp HHHHHHHHHHHTTCEECSCCEEC--SSE-----EEEEEECTTCCEEE
T ss_pred HHHHHHHHHHhcCceeecccccc--CCE-----EEEEEEcCCCCEEE
Confidence 34566677888998876543322 222 36999999999764
No 104
>2j0w_A Lysine-sensitive aspartokinase 3; feedback inhibition, allosteric regulation, ACT domain, transferase, amino acid biosynthesis; HET: ADP; 2.5A {Escherichia coli} SCOP: c.73.1.3 d.58.18.10 d.58.18.10 PDB: 2j0x_A*
Probab=21.52 E-value=28 Score=34.60 Aligned_cols=104 Identities=17% Similarity=0.168 Sum_probs=63.5
Q ss_pred CeEEEEEEec---CcccHHHHHHHHHHhCCceEEeEEEEEeeCCCEEEEEEEEe-cCCCCCCChHHHHHHHHHHHHHHcC
Q 015010 246 SHTLIQILGQ---DHKGLIYDMMRTLKDYNTQVSYGRFFAKPRGNCEVDLFIMQ-ADGKKIVDPSKQDALCSRLRMELLR 321 (414)
Q Consensus 246 ~~t~v~V~~~---DrpGLL~~i~~~L~~~~l~I~~A~I~t~t~g~~~~D~F~v~-~~g~~~~~~~~~~~l~~~L~~~l~~ 321 (414)
+.+.|+|.+. +.||.+++|-.+|++++++|.. |.++ . .-=.|.++ .+...-......+++.+.|.. + .
T Consensus 307 ~~~~i~i~~~~m~~~~g~~~~if~~l~~~~i~vd~--i~ss-~---~sis~~v~~~~~~~~~~~~~~~~~~~el~~-~-~ 378 (449)
T 2j0w_A 307 NQTLLTLHSLNMLHSRGFLAEVFGILARHNISVDL--ITTS-E---VSVALTLDTTGSTSTGDTLLTQSLLMELSA-L-C 378 (449)
T ss_dssp EEEEEEECCCSCSCHHHHHHHHTTTTTTTTCCCSE--EEEE-T---TEEEEEECCCCCSSTTCCSSCHHHHHHHHH-H-S
T ss_pred CEEEEEEEecCCCCccCHHHHHHHHHHHcCCCEEE--EEeC-C---CeEEEEEeccccchhhHHHHHHHHHHHhcc-C-C
Confidence 4567788764 7789999999999999999985 5532 1 22346665 221110011233455555543 1 1
Q ss_pred CcceeeecCCCCceeeeeeeEEEEeC---CccchHHHHHHHHHhCCceEEE
Q 015010 322 PLRVAVVNRGPDAELLVANPVELSGR---GRPLVFYDITLALKILSISIFS 369 (414)
Q Consensus 322 ~~~~~~~~~~~~~~v~~~~~lev~~~---DRpGLL~dIt~~l~~~gl~I~~ 369 (414)
+..+ ..+ -.+|.|.|. ..||+...+-.+|.+ ++|..
T Consensus 379 ~v~~---~~~-------~a~vsvVG~gm~~~~gv~~~~f~aL~~--ini~m 417 (449)
T 2j0w_A 379 RVEV---EEG-------LALVALIGNDLSKACGVGKEVFGVLEP--FNIRM 417 (449)
T ss_dssp CEEE---EEE-------EEEEEEEESSCTTSSSHHHHHHSSCTT--SCCCE
T ss_pred eEEE---eCC-------eEEEEEECCCccccccHHHHHHHHHhC--CCeEE
Confidence 2111 000 126777777 589999999999966 77663
No 105
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=21.32 E-value=3.3e+02 Score=27.37 Aligned_cols=132 Identities=18% Similarity=0.187 Sum_probs=70.6
Q ss_pred eEEEEeCCCCCChhHHHHHHHHHcCcEEEEEEEE-ecCCEEEEEEEEEcCCCCCHHHHHHHHHHhCCCCC---cCCc---
Q 015010 21 TVITVNCPDKTGLGCDLCRIILLFGLSISRGDLS-KDGKWCYLVFWVVGKPTTRWSLLKNRLLEVCPSYF---STSR--- 93 (414)
Q Consensus 21 ~~v~v~~~d~~Gll~~~~~vl~~~~L~I~~a~i~-tdg~~~~d~f~v~~~~g~~~~~l~~~l~~~~~~~~---~~~~--- 93 (414)
..+.+.-|||||-|.+++.+|. +-+|.+-.-. ++.+-+-..+.+.-..+ .+-+...++++..... ..+.
T Consensus 339 ~~~~v~~p~~pg~l~~~~~~l~--~~~i~~~~~~~~~~~~~~~~~~~e~~~~--~~~~~~~~~~l~~~g~~~~~~~~~~~ 414 (514)
T 1tdj_A 339 ALLAVTIPEEKGSFLKFCQLLG--GRSVTEFNYRFADAKNACIFVGVRLSRG--LEERKEILQMLNDGGYSVVDLSDDEM 414 (514)
T ss_dssp EEEEEECCBSSSCSHHHHHTTS--SSEEEEEEEECCCSSBCEEEEEEECSST--HHHHHHHHHHHTSSSCEEETTSSCHH
T ss_pred ccccccCCCCCchHHHHHHHhC--CCceEEEEeeccCCCeEEEEEEEEeCCc--HHHHHHHHHHHHhCCCCeEECCCCHH
Confidence 4577889999999999999887 5677765543 22222222222221211 3444444444443321 1110
Q ss_pred -cccccccccc-CCCCCCeEEEEEEEecCCcchHHHHHHHHHhCCCeEEEEEEEeCCC---CeEEEEEEEe
Q 015010 94 -IYSYRLENQQ-QPKPPDVFLLKFWCFQDRKGLLHDVTEVLCELELTIKRVKVSTTPD---GRVMDLFFIT 159 (414)
Q Consensus 94 -~~~~~~~~~~-~~~~~~~~~i~v~~~~Dr~GLl~~i~~~L~~~glnI~~A~i~T~~~---g~~~d~f~V~ 159 (414)
...++.-++- .+...+-....+.- |.|||-|.+.-..|.. ++||---+--. ++ |+++.-|.|.
T Consensus 415 ~~~h~~~~~g~~~~~~~~e~~~~~~f-pe~~gal~~fl~~~~~-~~~i~~~~yr~-~g~~~~~~~~~~~~~ 482 (514)
T 1tdj_A 415 AKLHVRYMVGGRPSHPLQERLYSFEF-PESPGALLRFLNTLGT-YWNISLFHYRS-HGTDYGRVLAAFELG 482 (514)
T ss_dssp HHHTGGGTCCCCCSSCCCCEEEEEEC-CCCTTHHHHHHHHHCS-CCCCCEEECBC-TTTCSSCEEEEEC--
T ss_pred HHHHHHHhhCCcCccCCCceEEEEeC-CCCCCHHHHHHHhcCC-CceEEEEeecC-CCCCcccEEEEEEcC
Confidence 0112222221 12233456667777 9999999888888864 67776443322 33 4666666654
No 106
>1rwu_A Hypothetical UPF0250 protein YBED; mixed alpha-beta fold, structural genomics, protein structure initiative, PSI; NMR {Escherichia coli} SCOP: d.58.54.1
Probab=20.87 E-value=3e+02 Score=21.45 Aligned_cols=63 Identities=22% Similarity=0.194 Sum_probs=41.5
Q ss_pred CCCCeEEEEEEEecCCcchHHHHHHHHHhC---CCeEEEEEEEeCCCCe-EEEEEEEecCCCCCCCHHHHHHHHHH
Q 015010 106 KPPDVFLLKFWCFQDRKGLLHDVTEVLCEL---ELTIKRVKVSTTPDGR-VMDLFFITDTRELLHTRKRREETIHH 177 (414)
Q Consensus 106 ~~~~~~~i~v~~~~Dr~GLl~~i~~~L~~~---glnI~~A~i~T~~~g~-~~d~f~V~~~~~~~~~~~~~~~i~~~ 177 (414)
+-|-.+.+.|++ ...+++...|..++..+ +.++ .-+ .+.+|+ .--.+.|.- .+.+.++.|-+.
T Consensus 32 eFPc~y~~KvIG-~a~~~~~~~V~~vv~~~~p~d~~~-~~r--~Ss~GkY~Svtv~v~v-----~S~eQv~aiY~~ 98 (109)
T 1rwu_A 32 EFPTPFTYKVMG-QALPELVDQVVEVVQRHAPGDYTP-TVK--PSSKGNYHSVSITINA-----THIEQVETLYEE 98 (109)
T ss_dssp CCCCCEEEEEEE-ECCTTHHHHHHHHHHHHSSSCCCE-EEE--ESSCSSEEEEEEEECC-----SSHHHHHHHHHH
T ss_pred cCCCCceEEEEE-ECcHHHHHHHHHHHHHhCCCCCCc-eec--CCCCCeEEEEEEEEEE-----CCHHHHHHHHHH
Confidence 345579999999 99999999999999998 7887 333 334554 333333332 245555555333
No 107
>1f9z_A Glyoxalase I; beta-alpha-beta-BETA-beta motif, protein-NI(II) complex, homodimer, lyase; 1.50A {Escherichia coli} SCOP: d.32.1.1 PDB: 1fa5_A 1fa6_A 1fa7_A 1fa8_A
Probab=20.80 E-value=2.1e+02 Score=21.51 Aligned_cols=49 Identities=8% Similarity=-0.071 Sum_probs=33.3
Q ss_pred eEEEEeCCccchHHHHHHHHHhCCceEEEEEEecceeCceeeEEEEEEEEcCCCCCCC
Q 015010 341 PVELSGRGRPLVFYDITLALKILSISIFSVEIGRYMIHDREWEVYRILLDEADGNLEP 398 (414)
Q Consensus 341 ~lev~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T~~~g~~~~~~d~Fyv~d~~g~~l~ 398 (414)
.+-+...| +.++.+.|.+.|+.+...-... ..|.. ..||++|++|+.+.
T Consensus 74 ~~~~~v~d----~~~~~~~l~~~G~~~~~~~~~~-~~g~~----~~~~~~DPdG~~ie 122 (135)
T 1f9z_A 74 HIALSVDN----AAEACEKIRQNGGNVTREAGPV-KGGTT----VIAFVEDPDGYKIE 122 (135)
T ss_dssp EEEEECSC----HHHHHHHHHHTTCEEEEEEEEC-TTSCC----EEEEEECTTSCEEE
T ss_pred EEEEEeCC----HHHHHHHHHHCCCEEecCCccC-CCCce----eEEEEECCCCCEEE
Confidence 34455556 7788889999999987653333 12431 25899999999764
No 108
>1zvp_A Hypothetical protein VC0802; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 2.20A {Vibrio cholerae} SCOP: d.58.18.9 d.58.18.9
Probab=20.73 E-value=51 Score=27.00 Aligned_cols=28 Identities=18% Similarity=-0.079 Sum_probs=23.6
Q ss_pred EeCCccchHHHHHHHHHhCCceEEEEEEec
Q 015010 345 SGRGRPLVFYDITLALKILSISIFSVEIGR 374 (414)
Q Consensus 345 ~~~DRpGLL~dIt~~l~~~gl~I~~A~I~T 374 (414)
.+.|-.|+++.|+..|++.||+|+ -|+|
T Consensus 80 ~~l~~vGi~a~is~~LA~agIsif--~iSt 107 (133)
T 1zvp_A 80 SSLEAVGLTAAFATKLAEHGISAN--VIAG 107 (133)
T ss_dssp C--CCSCHHHHHHHHHHHTTCCCE--EEEC
T ss_pred CCccHHHHHHHHHHHHHhCCCCcE--EEEe
Confidence 346889999999999999999999 4777
Done!