Query 015012
Match_columns 414
No_of_seqs 142 out of 1134
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 05:06:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015012.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015012hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3us8_A Isocitrate dehydrogenas 100.0 8E-117 3E-121 904.6 30.6 404 2-411 23-426 (427)
2 1lwd_A Isocitrate dehydrogenas 100.0 2E-114 8E-119 885.6 32.3 410 2-412 1-412 (413)
3 2uxq_A Isocitrate dehydrogenas 100.0 3E-113 1E-117 874.6 29.7 398 5-408 2-399 (402)
4 4aoy_A Isocitrate dehydrogenas 100.0 4E-113 1E-117 871.7 28.4 399 3-407 1-399 (402)
5 1zor_A Isocitrate dehydrogenas 100.0 3E-111 9E-116 860.1 31.8 395 3-409 1-398 (399)
6 1x0l_A Homoisocitrate dehydrog 100.0 3E-107 1E-111 810.3 35.2 327 10-408 2-332 (333)
7 2qfy_A Isocitrate dehydrogenas 100.0 4E-108 2E-112 841.8 29.3 407 3-412 16-425 (427)
8 3u1h_A 3-isopropylmalate dehyd 100.0 3E-107 9E-112 822.2 32.0 344 7-407 21-377 (390)
9 3flk_A Tartrate dehydrogenase/ 100.0 9E-107 3E-111 815.6 33.0 345 8-407 4-361 (364)
10 3udu_A 3-isopropylmalate dehyd 100.0 5E-107 2E-111 815.4 30.4 337 10-408 7-357 (361)
11 3vmk_A 3-isopropylmalate dehyd 100.0 7E-107 2E-111 817.9 30.8 347 8-407 12-372 (375)
12 3ty4_A Probable homoisocitrate 100.0 3E-106 1E-110 810.6 33.3 333 9-407 10-365 (366)
13 3dms_A Isocitrate dehydrogenas 100.0 3E-106 9E-111 826.7 31.9 363 8-406 35-426 (427)
14 2y3z_A 3-isopropylmalate dehyd 100.0 4E-106 1E-110 809.2 31.0 336 9-410 3-351 (359)
15 2iv0_A Isocitrate dehydrogenas 100.0 1E-105 4E-110 819.2 32.3 365 4-407 20-410 (412)
16 2e0c_A 409AA long hypothetical 100.0 2E-105 8E-110 816.5 34.7 365 4-407 17-407 (409)
17 3r8w_A 3-isopropylmalate dehyd 100.0 4E-106 1E-110 818.1 27.5 350 7-413 40-404 (405)
18 1cnz_A IPMDH, IMDH, protein (3 100.0 1E-105 4E-110 807.6 30.2 342 9-407 4-360 (363)
19 1tyo_A Isocitrate dehydrogenas 100.0 4E-105 1E-109 819.3 32.9 359 10-407 36-422 (435)
20 1wpw_A 3-isopropylmalate dehyd 100.0 7E-105 3E-109 794.2 33.8 326 10-406 2-335 (336)
21 1vlc_A 3-isopropylmalate dehyd 100.0 3E-105 1E-109 803.3 30.3 337 10-408 13-364 (366)
22 2d4v_A Isocitrate dehydrogenas 100.0 9E-105 3E-109 815.3 32.9 362 10-406 27-429 (429)
23 1hqs_A Isocitrate dehydrogenas 100.0 7E-105 2E-109 815.4 31.1 362 10-406 20-422 (423)
24 2d1c_A Isocitrate dehydrogenas 100.0 2E-104 7E-109 819.1 33.6 341 2-410 8-359 (496)
25 3blx_B Isocitrate dehydrogenas 100.0 3E-105 1E-109 801.1 26.8 325 9-406 21-354 (354)
26 3blx_A Isocitrate dehydrogenas 100.0 6E-105 2E-109 797.8 27.6 327 8-408 16-348 (349)
27 1a05_A IPMDH, IMDH, 3-isopropy 100.0 2E-104 5E-109 798.9 26.8 341 10-407 2-355 (358)
28 1w0d_A 3-isopropylmalate dehyd 100.0 7E-104 2E-108 788.2 30.9 331 10-406 2-337 (337)
29 1itw_A Isocitrate dehydrogenas 97.0 0.011 3.7E-07 62.0 14.8 183 179-372 454-644 (741)
30 2b0t_A NADP isocitrate dehydro 97.0 0.011 3.8E-07 61.9 14.4 183 179-372 450-640 (738)
31 1yxo_A 4-hydroxythreonine-4-ph 93.2 0.05 1.7E-06 53.9 3.6 137 184-344 173-323 (328)
32 2hi1_A 4-hydroxythreonine-4-ph 93.2 0.05 1.7E-06 53.9 3.5 135 184-343 180-328 (330)
33 3lxy_A 4-hydroxythreonine-4-ph 93.1 0.054 1.8E-06 53.8 3.6 137 184-344 178-328 (334)
34 4aty_A Terephthalate 1,2-CIS-d 93.1 0.049 1.7E-06 54.3 3.3 133 184-343 195-340 (349)
35 3tsn_A 4-hydroxythreonine-4-ph 91.7 0.093 3.2E-06 52.6 3.3 79 251-343 282-362 (367)
36 2qfy_A Isocitrate dehydrogenas 72.1 0.59 2E-05 47.8 -0.9 16 127-142 156-171 (427)
37 1yxo_A 4-hydroxythreonine-4-ph 42.3 14 0.00047 36.4 3.0 21 8-28 1-23 (328)
38 1itw_A Isocitrate dehydrogenas 34.1 27 0.00092 37.0 3.7 114 136-252 177-297 (741)
39 4aty_A Terephthalate 1,2-CIS-d 33.3 26 0.00089 34.5 3.4 21 10-30 9-31 (349)
40 2hi1_A 4-hydroxythreonine-4-ph 33.1 25 0.00084 34.6 3.1 20 10-29 7-28 (330)
41 3lxy_A 4-hydroxythreonine-4-ph 31.2 23 0.0008 34.8 2.6 19 10-28 9-29 (334)
42 2b0t_A NADP isocitrate dehydro 30.3 28 0.00094 36.9 3.0 114 136-252 175-295 (738)
43 3tsn_A 4-hydroxythreonine-4-ph 26.2 29 0.001 34.6 2.3 19 10-28 5-25 (367)
44 3s3t_A Nucleotide-binding prot 22.2 60 0.002 26.0 3.2 25 189-213 16-40 (146)
45 3hgm_A Universal stress protei 21.3 65 0.0022 25.7 3.2 26 189-214 13-38 (147)
46 3fg9_A Protein of universal st 20.1 79 0.0027 25.7 3.6 26 188-213 27-52 (156)
No 1
>3us8_A Isocitrate dehydrogenase [NADP]; PSI-biology, structural genomics; 2.25A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.8e-117 Score=904.64 Aligned_cols=404 Identities=69% Similarity=1.135 Sum_probs=363.9
Q ss_pred CccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCC
Q 015012 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (414)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~ 81 (414)
.|+||||+++|++|||||||||||++++++|.+++++|+|+++++|++++++||+++|++++++|++++++||||++||.
T Consensus 23 ~~~~i~~~~~I~vipGDGIGpEI~~~~~~vL~~~~~~i~~~~~~~G~~~~~~tg~~lp~etl~aik~~da~LkGav~tP~ 102 (427)
T 3us8_A 23 MMAKIKVANPVVELDGDEMTRIIWQFIKDKLIHPYLDLDLEYYDLGVENRDATDDQVTIDAANAIKKHGVGVKCATITPD 102 (427)
T ss_dssp --CCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred ccccccccceEEEEcCCcccHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCC
Confidence 58999999999999999999999999999999899999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecC
Q 015012 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPE 161 (414)
Q Consensus 82 ~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~ 161 (414)
+..++|+.+.++|+|+|++|||.||||+|+||+.++++|++.+++++|||||||||||+|+|+|+...+++..++.|.++
T Consensus 103 ~~~~~e~~l~~~~~s~n~~LRk~LdlyanvRPv~~~~ip~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~l~~~~~ 182 (427)
T 3us8_A 103 EGRVEEFKLKKMWKSPNGTIRNILGGVIFREPIICKNVPRLVPGWTKPIIVGRHAFGDQYRATDFKFPGKGKLSIKFVGE 182 (427)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred ccccccccccccccCchHHHHHHhCCeEEecceeccCCCCCCCCCCCCEEEEEeCCCCccCCceeEEecCCcceeeeecc
Confidence 87667777777899999999999999999999966889877777789999999999999999999887788888888777
Q ss_pred CCCccchhhhccccCCcceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCcc
Q 015012 162 GKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 241 (414)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~ 241 (414)
+|+ .++..+++|.+ .+++..+++||+++|||+|+||+||++|+++||+|||+||||.|||+||++|+|||+++||++|
T Consensus 183 ~G~-~~~~~~~~~~~-~~va~~~~~T~~~~eRiar~AFe~A~~r~kkVt~v~KaNIlk~tdglfr~~~~eva~~eYp~~~ 260 (427)
T 3us8_A 183 DGQ-TIEHDVYDAPG-AGVALAMYNLDESITEFARASFNYGLQRKVPVYLSTKNTILKAYDGRFKDIFQKVFDEEFAAQF 260 (427)
T ss_dssp TSC-EEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHH
T ss_pred ccc-cccccccccCC-CcEEEEEeeCHHHHHHHHHHHHHHHHHcCCcEEEEECcccchhhhhHHHHHHHHHHHHhCcccc
Confidence 663 22223334443 5677558899999999999999999999999999999999999999999999999855898888
Q ss_pred ccCCeEEeeeeHHHHHHHHhhCCCccEEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCccccccccc
Q 015012 242 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 321 (414)
Q Consensus 242 ~~~~I~~~~~~VDa~~~~lv~~P~~fViv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~d 321 (414)
++.+|++++++||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+|||||||+++|
T Consensus 261 ~~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~~~a~fEp~HGSAPd~~~~~ 340 (427)
T 3us8_A 261 KAEKLWYEHRLIDDMVASALKWSGGYVWACKNYDGDVQSDIVAQGFGSLGLMTSVLMTPDGKTVEAEAAHGTVTRHYRQH 340 (427)
T ss_dssp HHTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHSCTTSEEEEEECTTSCCEEEECCSCCCHHHHHHH
T ss_pred CCCCeEEEEEEHHHHHHHHhhCCCCcEEEeCCcCCcHHHHHHHHhcCChhhCceeEECCCCCeEEEeCCCCCcCCccchh
Confidence 77799999999999999999999999999999999999999999999999999999998752499999999999988889
Q ss_pred ccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHHHHHHH
Q 015012 322 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDA 401 (414)
Q Consensus 322 IaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 401 (414)
|||||++|||+|+|||++|||+|||+++.++.+.++|++|++||.+|+++|++|+|||+.+ ++ ..+.+||+||+|+
T Consensus 341 iAGk~i~ANP~A~IlS~ammL~hlG~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~-~~---~~~~~~T~e~~da 416 (427)
T 3us8_A 341 QKGEETSTNSIASIFAWTRGLAHRAKLDGNAELAKFSETLERVCVDTVESGFMTKDLALLI-GP---DQPWLSTTGFLDK 416 (427)
T ss_dssp HTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCBHHHHHHH-CT---TCCCBCHHHHHHH
T ss_pred cCCCCceeCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCCcCccccccc-cc---CCcccCHHHHHHH
Confidence 9999988999999999999999999988777789999999999999999999999998422 11 1236999999999
Q ss_pred HHHHHHHHhh
Q 015012 402 VADDLRARLS 411 (414)
Q Consensus 402 V~~~l~~~~~ 411 (414)
|+++|++.|.
T Consensus 417 V~~~l~~~l~ 426 (427)
T 3us8_A 417 IDENLRKAMA 426 (427)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhc
Confidence 9999998874
No 2
>1lwd_A Isocitrate dehydrogenase; tricarboxylic acid cycle, oxidoreductase, NADP; HET: ICT; 1.85A {Sus scrofa} SCOP: c.77.1.1 PDB: 1t0l_A* 1t09_A* 3mas_B* 3map_A* 3mar_A* 3mas_A* 3inm_A* 2cmj_A* 2cmv_A*
Probab=100.00 E-value=2.3e-114 Score=885.65 Aligned_cols=410 Identities=69% Similarity=1.155 Sum_probs=358.2
Q ss_pred CccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCC
Q 015012 2 AFQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPD 81 (414)
Q Consensus 2 ~~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~ 81 (414)
|.+||||++||++|||||||||||++++++|..++++|+|+++++|++++++||+++|++++++|+++|++||||++||.
T Consensus 1 ~~~~i~~~~~i~~l~GDgiGpei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~LkGav~tP~ 80 (413)
T 1lwd_A 1 ADQRIKVAKPVVEMDGDEMTRIIWQFIKEKLILPHVDVQLKYFDLGLPNRDQTNDQVTIDSALATQKYSVAVKCATITPD 80 (413)
T ss_dssp CCCCEECSSCEEEEECCHHHHHHHHHHHHHTTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCC
T ss_pred CCCcceecccEEEecCCChhHHHHHHHHHHHHhCCCCeEEEEEecCHHHHhccCCcCcHHHHHHHHHCCEEEECCccCCC
Confidence 45899999999999999999999999999999889999999999999999999999999999999999999999999998
Q ss_pred chhHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecC
Q 015012 82 EARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPE 161 (414)
Q Consensus 82 ~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~ 161 (414)
+..+++..+.++|+|+|++|||.||||+|+||++++++|++.+++++||+|+||||||+|+++++...++|..++.|.++
T Consensus 81 ~~~~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvRe~t~g~Y~g~d~~~~~e~~~~~~~~~~ 160 (413)
T 1lwd_A 81 EARVEEFKLKKMWKSPNGTIRNILGGTVFREPIICKNIPRLVPGWTKPITIGRHAHGDQYKATDFVVDRAGTFKIVFTPK 160 (413)
T ss_dssp HHHHHHHTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCSCEEEEEECSSGGGGCEEEEECSSEEEEEEEEET
T ss_pred cccCccccccccccCccHHHHHhcCCEEEEeeeeccCCCCCCCCCCCceEEEecccCCccCCceeEeccCCcceeeEecc
Confidence 65444443444789999999999999999999988888877777889999999999999999999988888878888876
Q ss_pred CCCccchhhhccccCCcceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCcc
Q 015012 162 GKDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKF 241 (414)
Q Consensus 162 ~g~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~ 241 (414)
+|+...+..++++.. ++++...+||+++++||+|+||+||++|+++||+|||+|||+.|+|+|+++|+|||+++|||+|
T Consensus 161 ~g~~~~~~~~~~~~~-~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~ 239 (413)
T 1lwd_A 161 DGSSAKQWEVYNFPA-GGVGMGMYNTDESISGFAHSCFQYAIQKKWPLYMSTKNTILKAYDGRFKDIFQEIFEKHYKTDF 239 (413)
T ss_dssp TCCCCEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHH
T ss_pred CCcccccccccccCC-CcEEEEEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCcchhhHHHHHHHHHHHHHHHhCCCcc
Confidence 653222222222221 2334448999999999999999999999889999999999999999999999999746999777
Q ss_pred ccCCeEEeeeeHHHHHHHHhhCCCccEEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCccccccccc
Q 015012 242 EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 321 (414)
Q Consensus 242 ~~~~I~~~~~~VDa~~~~lv~~P~~fViv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~d 321 (414)
.+.+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++.++||||+|||||++++++
T Consensus 240 ~~~~I~~~~~~VD~~~mqlv~~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~~~~ 319 (413)
T 1lwd_A 240 DKYKIWYEHRLIDDMVAQVLKSSGGFVWACKNYDGDVQSDILAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYREH 319 (413)
T ss_dssp HHTTCCEEEEEHHHHHHHHHHSCCCEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSSCEEEECCSCCCHHHHHHH
T ss_pred cCCeEEEEEEEHHHHHHHHhcCCCceEEEecccccchHHHHHHhhcCCccccccceeCCCCCceEEeCCCCChhhhhhhh
Confidence 77779999999999999999999999999999999999999999999999999999998862389999999999888888
Q ss_pred ccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCC-cCCcc-cccCHHHHH
Q 015012 322 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGS-KMTRE-HYLNTEEFI 399 (414)
Q Consensus 322 IaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~-~~~~~-~~~sT~e~~ 399 (414)
|||||++|||+|+|||++|||+|||+.+.++.+.++|++|++||.+|+++|++|+|||..+.|. ...+. +.+||+||+
T Consensus 320 ~aGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~~~~T~e~~ 399 (413)
T 1lwd_A 320 QKGRPTSTNPIASIFAWTRGLEHRGKLDGNQDLIRFAQTLEKVCVETVESGAMTKDLAGCIHGLSNVKLNEHFLNTSDFL 399 (413)
T ss_dssp HTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHCTTSCCBTTTBCCHHHHH
T ss_pred hcCCCCccChHHHHHHHHHHHHHcCCccccchhHHHHHHHHHHHHHHHHcCCcCcccccccCCcccccccCCCCCHHHHH
Confidence 8999966999999999999999999876666677899999999999999999999997322231 11111 368999999
Q ss_pred HHHHHHHHHHhhc
Q 015012 400 DAVADDLRARLSG 412 (414)
Q Consensus 400 daV~~~l~~~~~~ 412 (414)
|+|+++|++.|.+
T Consensus 400 daV~~~l~~~~~~ 412 (413)
T 1lwd_A 400 DTIKSNLDRALGR 412 (413)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhc
Confidence 9999999887765
No 3
>2uxq_A Isocitrate dehydrogenase native; psychrophilic, cold adaptation, thermal stability, oxidoreductase; HET: SO4 PEG; 1.75A {Desulfotalea psychrophila} PDB: 2uxr_A*
Probab=100.00 E-value=3.1e-113 Score=874.63 Aligned_cols=398 Identities=48% Similarity=0.812 Sum_probs=349.3
Q ss_pred ceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchh
Q 015012 5 KIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (414)
Q Consensus 5 ~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~ 84 (414)
||||+++|++|||||||||||++++++|.+++++|+|+++++|++++++||+++|++++++|+++|++||||++||.+..
T Consensus 2 ~~~~~~~i~~i~GDgig~ei~~~~~~vl~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~LkGav~tP~~~~ 81 (402)
T 2uxq_A 2 KIQMKTPLVELDGDEMTRVLWPLIKDKLLLPFIDLQTEYYDLGIEERDRTNDQITIDAAEAIKKYGVGVKNATITPNQDR 81 (402)
T ss_dssp CBCCSSCEEEEECCHHHHHHHHHHHHHHTTTTBCCCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCHHH
T ss_pred ceeeecceEEecCCCccHHHHHHHHHHHHhCCCCeEEEEEecCHHHHHhhCCcCCHHHHHHHHhCCEEEECCccCCCccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999998654
Q ss_pred HHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecCCCC
Q 015012 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKD 164 (414)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g~ 164 (414)
+++..+.++|+|+|++|||.||||+|+||++++++|++.+++++||||+||||||+|+|+++...++|..++.|.+++|.
T Consensus 82 ~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divIvRE~teg~Y~g~e~~~~~~g~~~~~~~~~~g~ 161 (402)
T 2uxq_A 82 VEEYGLKEQWKSPNATVRAMLDGTVFRKPIMVKNIKPSVRSWQKPIVVGRHAYGDFYKNAEIFAEAGGKLEIVVTDKNGK 161 (402)
T ss_dssp HHHHTCSSCCCCHHHHHHHHHCCEEEEEECCCTTCCCSBTTCCSCCEEEEECSCGGGGCEEEEETTCEEEEEEEECTTSC
T ss_pred CccccccccccCchHHHHHHhCCeEEEEEEEcCCCCCCCCCCCCCeEEEeccCCCcccCcceeeccCCcceeeeeccCCc
Confidence 55544545789999999999999999999988888866666789999999999999999999887777767666655542
Q ss_pred ccchhhhccccCCcceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCccccC
Q 015012 165 EKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAA 244 (414)
Q Consensus 165 ~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~ 244 (414)
..+..++.+.. ++++...++|++++|||+|+||+||++|+++||+|||+|||+.|||+|+++|+|||+++|||+|.+.
T Consensus 162 -~~~~~~~~~~~-~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNVlk~sdglf~~~~~eva~~eypd~~~~~ 239 (402)
T 2uxq_A 162 -ETRQTIMEVDE-PAIVQGIHNTVASIGHFARACFEYSLDQKIDCWFATKDTISKQYDQRFKIIFEEIFAQEYKEKFAAA 239 (402)
T ss_dssp -EEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred -cccccccccCC-CceEEEEEECHHHHHHHHHHHHHHHHHcCCcEEEEECCCcchhhHHHHHHHHHHHHHHhCCCcccCC
Confidence 11111222222 3444457899999999999999999999889999999999999999999999999746899666666
Q ss_pred CeEEeeeeHHHHHHHHhhCCCccEEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccC
Q 015012 245 GIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKG 324 (414)
Q Consensus 245 ~I~~~~~~VDa~~~~lv~~P~~fViv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaG 324 (414)
+|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||++++++|||
T Consensus 240 ~I~~~~~~vD~~~mqlv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~lfEpvHGSAPdi~~~~~aG 318 (402)
T 2uxq_A 240 GIEYFYTLIDDVVARMMKTEGGMLWACKNYDGDVMSDMVASAFGSLAMMSSVLVSPYG-YFEYEAAHGTVQRHYYQHLKG 318 (402)
T ss_dssp TCCEEEEEHHHHHHHHTTCCCCSEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTS-CEEEECCSCCCHHHHHHHHTT
T ss_pred eEEEEEEEHHHHHHHHccCCCceEEEEcccchHHHHHHHHHhcCCccccccceecCCC-CeEEeCCCCChhhhhhhhhcC
Confidence 6999999999999999999999999999999999999999999999999999999886 489999999999888788899
Q ss_pred CCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHHHHHHHHHH
Q 015012 325 GETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 404 (414)
Q Consensus 325 k~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 404 (414)
||++|||+|+|||++|||+|||+.+.++.+.++|++|++||.+|+++|++|+|||+...|. +.+.+||+||+|+|++
T Consensus 319 k~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~G~~T~Dlgg~~~g~---~~~~~~T~e~~daI~~ 395 (402)
T 2uxq_A 319 ERTSTNPVALIYAWTGALRKRGELDGTPDLCAFCDSLEAITIECIESGYMTGDLARICEPA---AIKVLDSIEFIDELGK 395 (402)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTEECHHHHTTCSSC---CSEECCHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHHcCCcCccccccCCCC---CCCCcCHHHHHHHHHH
Confidence 9955999999999999999999877677778899999999999999999999998322121 1125899999999999
Q ss_pred HHHH
Q 015012 405 DLRA 408 (414)
Q Consensus 405 ~l~~ 408 (414)
+|+.
T Consensus 396 ~l~~ 399 (402)
T 2uxq_A 396 RLQQ 399 (402)
T ss_dssp HHHH
T ss_pred HHhh
Confidence 9953
No 4
>4aoy_A Isocitrate dehydrogenase [NADP]; oxidoreductase, temperature adaptation, thermophilic, psychr NADP+ selectivity, domain movements; 2.35A {Clostridium thermocellum} PDB: 4aou_A
Probab=100.00 E-value=3.7e-113 Score=871.66 Aligned_cols=399 Identities=54% Similarity=0.906 Sum_probs=335.9
Q ss_pred ccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
|.||||++||++|||||||||+|+.++++++.++++|+|+++++|.+++++||+++|++++++|++++|+||||++||.+
T Consensus 1 ~~~i~~~~~i~~i~GDei~~e~~~~i~~v~~~~~~~i~~~~~d~G~~~~~~tg~~lp~etl~aik~~~v~lkGa~~tP~~ 80 (402)
T 4aoy_A 1 MSKIKMKVPLVEMDGDEMTRIIWRLIKENLLEPYIELNTEYYDLGLENRDKTEDQVTIDAARAIQKYGVGVKCATITPNA 80 (402)
T ss_dssp -CCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHHTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCcccccCcEEEECCCchHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECcccCCCc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecCC
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEG 162 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~ 162 (414)
.++++++|.++|+|+|++|||.||||+|+||+.++++|++.+++++|||||||||||+|+|+|+...+++..++.|.+++
T Consensus 81 ~~~~~~~l~~~~~s~n~~LR~~Ldlyan~rPv~~~~i~~~~~~~~~DivIvREnteg~Y~g~e~~~~~~~~~~~~~~~~~ 160 (402)
T 4aoy_A 81 QRVEEYNLKKMWKSPNGTIRAILDGTVFRAPIVVNSIKPFVKGWKKPISIARHAYGDVYKNVEYYVPSAGKAELVFTSEN 160 (402)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHTCEEEEEECCCTTSCCSBTTCCBCCEEEEC------CCEEEEECSCEEEEEEEEETT
T ss_pred cccccccccccccChHHHHHHHhCCeEEeeeEeccCCCCcCCCCCCCEEEEEeccCCeecCceeeccCccceeeeeeccC
Confidence 76666667778999999999999999999999668888766677899999999999999999998888888888888776
Q ss_pred CCccchhhhccccCCcceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCccc
Q 015012 163 KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFE 242 (414)
Q Consensus 163 g~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~ 242 (414)
|.. ....+.+|.+ .+++...++|+++++||+|+||+||++|+++||+|||+|||+.|||+|+++|+|||+++||++|+
T Consensus 161 g~~-~~~~~~~~~~-~gv~~~~~~t~~~~eRiar~AF~~A~~~~~~vt~v~KaNilk~tdglf~~~~~eva~~eyp~~~~ 238 (402)
T 4aoy_A 161 GEV-SRQTIHEFDG-PGVIMGMHNTDKSIRSFARACFNYALDMNQDLWFSTKDTISKTYDHRFKDIFQEIYENEYKEKFE 238 (402)
T ss_dssp SCE-EEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred Ccc-cccccccccC-CeeEEEEEecHHHHHHHHHHHHHHHHHcCCcEEEEECCccchhhhhHHHHHHHHHHHHhCccccc
Confidence 642 1112233332 44555588899999999999999999999999999999999999999999999998559998888
Q ss_pred cCCeEEeeeeHHHHHHHHhhCCCccEEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccc
Q 015012 243 AAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ 322 (414)
Q Consensus 243 ~~~I~~~~~~VDa~~~~lv~~P~~fViv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dI 322 (414)
+.+|+++|++||+|+||||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||+|++++|
T Consensus 239 ~~~i~~~~~~vD~~~~~lv~~P~~fVivt~Nl~GDIlSD~~A~l~GslGl~psanig~~~-~~~fEp~HGSApd~~~~~i 317 (402)
T 4aoy_A 239 AKNLQYFYTLIDDAVARIIRSEGGMVWACKNYDGDVMSDMVASAFGSLAMMTSVLVSPDG-KYEFEAAHGTVTRHYYKHL 317 (402)
T ss_dssp HTTCCEEEEEHHHHHHHHHTSCBCSEEECCC-CHHHHHHHHHHHHSCTTSEEEEEECTTC-CEEEEC-------------
T ss_pred CCCeEEEEEEHHHHHHHHhhCCCCcEEEECCcchHHHHHHHHHhcCchhhccccccCCCC-ceEEeeccCCccccchhhc
Confidence 889999999999999999999999999999999999999999999999999999999886 6999999999999999999
Q ss_pred cCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHHHHHHHH
Q 015012 323 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAV 402 (414)
Q Consensus 323 aGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV 402 (414)
||||++|||+|+|||++|||+|+|+++.++.+.++|++|++||.+|+++|++|+|||+...| ...+.+||+||+|+|
T Consensus 318 aGk~~~aNP~A~Ils~a~mL~~~g~~~~~~~l~~~A~~ie~Av~~~l~~g~~T~Dlgg~~~~---~~~~~~~T~ef~~av 394 (402)
T 4aoy_A 318 KGEETSTNSMATIFAWTGALKKRGELDGIKELVDFATKLEQASVQTIENGVMTKDLASLSEV---PEKKIVNTEDFLKEI 394 (402)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTEEEHHHHTTCCC---SCCEEECHHHHHHHH
T ss_pred cCCCcCcCcHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHcCCCCccccccccc---CCCCCcCHHHHHHHH
Confidence 99997799999999999999999998877778899999999999999999999999832101 112356999999999
Q ss_pred HHHHH
Q 015012 403 ADDLR 407 (414)
Q Consensus 403 ~~~l~ 407 (414)
+++|+
T Consensus 395 ~~~l~ 399 (402)
T 4aoy_A 395 RKTFE 399 (402)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 99985
No 5
>1zor_A Isocitrate dehydrogenase; wild type enzyme, CIS-proline, thermostable, oxidoreductase; 2.24A {Thermotoga maritima}
Probab=100.00 E-value=2.7e-111 Score=860.08 Aligned_cols=395 Identities=53% Similarity=0.894 Sum_probs=345.5
Q ss_pred ccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
|+||+|++||++|||||||||||++++++|+.++++|+|+++++|++++++||+++|++++++|+++|++||||++||.+
T Consensus 1 ~~~~~~~~~I~~l~GDgiG~ei~~~v~~~l~~~~~~~~~~~~~~G~~~~~~~g~~lp~etl~~ik~~da~lkGav~tP~~ 80 (399)
T 1zor_A 1 MEKVKVKNPIVELDGDEMARVMWKMIKEKLILPYLDIQLVYFDLGIKKRDETDDQITIEAAKAIKKYGVGVKCATITPDA 80 (399)
T ss_dssp CCCEECCSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECCHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred CCcccccccEEEecCCcccHHHHHHHHHHHHhCCCCeEEEEEeCCHHHHhccCCcCcHHHHHHHHHCCEEEEcCccCCCc
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecCC
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEG 162 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~ 162 (414)
..+++..+.++|+|+|++|||.||||+|+||++++++|++.+++.+|++|+||||||+|+++++...++++.++.|.++.
T Consensus 81 ~~~~~~~~~~~~~s~~l~LR~~ldlyan~RPv~~~~~~~~~~~~~~divi~Re~t~g~Y~g~d~~~~~e~t~~~~y~~e~ 160 (399)
T 1zor_A 81 ERVKEYNLKKAWKSPNATIRAYLDGTVFRKPIMVKNVPPLVKRWKKPIIIGRHAYGDIYNAVEAKVEGPAEVELVVRNKE 160 (399)
T ss_dssp HHHHHHTCSSCCCCHHHHHHHHHTCEEEEEECCBTTBCCSBTTCCSCCEEEECCSSGGGGCEEEEECSSEEEEEEEESSS
T ss_pred ccCccccccccccCchHHHHHHhCCEEEEEEeecCCCCCcccCcCccceeeecccCCCcCCceeEecCCCcceeeEeccc
Confidence 44444334447899999999999999999999888888776777899999999999999999988778887777776531
Q ss_pred CCccchhhhccccCCcceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHh---hcCC
Q 015012 163 KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA---NWKS 239 (414)
Q Consensus 163 g~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~---~yp~ 239 (414)
+ .+..+.++.. ++++...++|+++++||+|+||+||++|+++||+|||+|||+.|||+|+++|+|||++ +||
T Consensus 161 ~---~~~~~~~~~~-~~~~~~~~~T~~~~eRiar~AFe~A~~r~~kVt~v~KaNvlk~sdglf~~~~~eva~~~~~~yp- 235 (399)
T 1zor_A 161 N---KTLLVHKFEG-NGVVMAMHNLEKSIRSFAQSCINYAISEKVDIWFATKDTISKVYHAYFKDIFQEEVDKRKEELE- 235 (399)
T ss_dssp C---EEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTCTTHHHHHHHHHHHHHHHTHHHHH-
T ss_pred c---ccceeeccCC-ceEEEEEEecHHHHHHHHHHHHHHHHHhCCeEEEEECcccHHHHHHHHHHHHHHHHHhhcccCC-
Confidence 1 0111222221 3344448899999999999999999999889999999999999999999999999742 787
Q ss_pred ccccCCeEEeeeeHHHHHHHHhhCCCccEEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCccccccc
Q 015012 240 KFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYR 319 (414)
Q Consensus 240 ~~~~~~I~~~~~~VDa~~~~lv~~P~~fViv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~ 319 (414)
+.+|+++|++||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||||++
T Consensus 236 ---~~~I~~~~~~vD~~~mqlv~~P~~fVivt~NlfGDIlSD~aA~l~GslGl~pSanig~~~-~~~fEpvHGSAPdi~~ 311 (399)
T 1zor_A 236 ---KAGVNYRYMLIDDAAAQILRSEGGMLWACMNYEGDIMSDMIASGFGSLGLMTSVLVSPDG-VYEFEAAHGTVRRHYY 311 (399)
T ss_dssp ---HTTCCEEEEEHHHHHHHHHHSCCCSEEEECHHHHHHHHHHHHHHHCCGGGEEEEEECTTC-CEEEEESSCCCHHHHH
T ss_pred ---CCcEEEEEEEHHHHHHHhccCCCceEEEEccchHHHHHHHHHHhcCCccccceeEecCCC-CeEEeCCCCcccccch
Confidence 124999999999999999999999999999999999999999999999999999999886 4899999999998888
Q ss_pred ccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHHHHH
Q 015012 320 VHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFI 399 (414)
Q Consensus 320 ~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 399 (414)
++|||||++|||+|+|||++|||+|||+.+.++.+.++|++|++||.+|+++|++|+|||+.+.|. +.+.+||+||+
T Consensus 312 ~~iaGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~g~~T~Dlgg~~~g~---~~~~~~T~e~~ 388 (399)
T 1zor_A 312 RYLKGEKTSTNPTASIFAWTGAIRKRGELDGTPEVCEFADKLEKAVINTIESGVITKDLQPFTEPP---IDKYVTLEEFI 388 (399)
T ss_dssp HHTTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCGGGGGGCSSC---CCCCCCHHHHH
T ss_pred hhhcCCCCccCcHHHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHHHHHcCCcCccccccCCCC---CCCCCCHHHHH
Confidence 889999955999999999999999999877666678899999999999999999999998322220 01248999999
Q ss_pred HHHHHHHHHH
Q 015012 400 DAVADDLRAR 409 (414)
Q Consensus 400 daV~~~l~~~ 409 (414)
|+|+++|++.
T Consensus 389 daV~~~l~~~ 398 (399)
T 1zor_A 389 DEVKKNLEKL 398 (399)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999999654
No 6
>1x0l_A Homoisocitrate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, lysine biosyn; 1.85A {Thermus thermophilus} PDB: 3asj_A* 3ah3_A
Probab=100.00 E-value=3.2e-107 Score=810.34 Aligned_cols=327 Identities=21% Similarity=0.220 Sum_probs=305.1
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhHHHHH
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~~e~~ 89 (414)
++|++|||||||||||+++++||.+.+++|+|+++++|+++++++|+++|++++++|+++|++||||++||..+.
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~~----- 76 (333)
T 1x0l_A 2 YRICLIEGDGIGHEVIPAARRVLEATGLPLEFVEAEAGWETFERRGTSVPEETVEKILSCHATLFGAATSPTRKV----- 76 (333)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHTTTCCEEEEEECCSHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCCSSCC-----
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecchHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCCCC-----
Confidence 689999999999999999999999889999999999999999999999999999999999999999999997431
Q ss_pred hhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCC-CCCEEEEeeccCCccccccccccCCCcceeeeecCCCCccch
Q 015012 90 LKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGW-TKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKTE 168 (414)
Q Consensus 90 l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~-~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g~~~~~ 168 (414)
.+++|+|++|||+||||+|+||++. +| +.++. ++|||||||||||+|+|.++.
T Consensus 77 --~~~~s~~l~lR~~ldlyan~RP~~~--~p-~~s~~~~vD~vivREnteg~Y~g~~~~--------------------- 130 (333)
T 1x0l_A 77 --PGFFGAIRYLRRRLDLYANVRPAKS--RP-VPGSRPGVDLVIVRENTEGLYVEQERR--------------------- 130 (333)
T ss_dssp --TTCCCHHHHHHHHTTCCEEEEEEEC--CS-STTCCSSCEEEEEEECGGGTCCCCEEE---------------------
T ss_pred --cCccChhHHHHHHcCCEEEEEEEee--cc-CCCCCCCCCEEEEecCccceecccccc---------------------
Confidence 2688999999999999999999874 45 54444 699999999999999997652
Q ss_pred hhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCccccCCe
Q 015012 169 LEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 246 (414)
Q Consensus 169 ~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~~I 246 (414)
+ ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|||+|+++|+||+ ++|| +|
T Consensus 131 -------~-~~~a~~~~~~T~~~~eRiar~AF~~A~~r~rkkvt~v~KaNvlk~t~glf~~~~~eva-~eyp------~I 195 (333)
T 1x0l_A 131 -------Y-LDVAIADAVISKKASERIGRAALRIAEGRPRKTLHIAHKANVLPLTQGLFLDTVKEVA-KDFP------LV 195 (333)
T ss_dssp -------E-TTEEEEEEEEEHHHHHHHHHHHHHHHHTSTTCEEEEEECTTTCTTHHHHHHHHHHHHH-TTCT------TS
T ss_pred -------C-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEecCccchhhhHHHHHHHHHHH-HHCC------Cc
Confidence 0 357877 9999999999999999999999 5679999999999999999999999997 6999 99
Q ss_pred EEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccCC
Q 015012 247 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGG 325 (414)
Q Consensus 247 ~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk 325 (414)
+++|++||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+|++ .+||||+||||| |||||
T Consensus 196 ~~~~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~--~a~fEp~HGSAP-----diaGk 268 (333)
T 1x0l_A 196 NVQDIIVDNCAMQLVMRPERFDVIVTTNLLGDILSDLAAGLVGGLGLAPSGNIGDT--TAVFEPVHGSAP-----DIAGK 268 (333)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECSS--CEEEEESSCCCG-----GGTTS
T ss_pred eEEEEEHHHHHHHHhhCcccceEEEEcCccchhHhHHHHhhcCCcccceeeEECCC--ceEEeCCCCChh-----hhcCC
Confidence 999999999999999999999 9999999999999999999999999999999987 489999999999 99999
Q ss_pred CCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHHHHHHHHHHH
Q 015012 326 ETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADD 405 (414)
Q Consensus 326 ~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~ 405 (414)
|+ |||+|+|||++|||+|||+ .++|++|++||.+++++|++|+||| | .+||+||+|+|+++
T Consensus 269 ~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlg----G-------~~~T~e~~daV~~~ 329 (333)
T 1x0l_A 269 GI-ANPTAAILSAAMMLDYLGE-------KEAAKRVEKAVDLVLERGPRTPDLG----G-------DATTEAFTEAVVEA 329 (333)
T ss_dssp SC-CCCHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHHSCCCGGGT----C-------CCCHHHHHHHHHHH
T ss_pred CC-cCcHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHcCCccCccC----C-------CCCHHHHHHHHHHH
Confidence 99 9999999999999999985 7999999999999999999999998 7 68999999999999
Q ss_pred HHH
Q 015012 406 LRA 408 (414)
Q Consensus 406 l~~ 408 (414)
|+.
T Consensus 330 l~~ 332 (333)
T 1x0l_A 330 LKS 332 (333)
T ss_dssp HHT
T ss_pred Hhh
Confidence 953
No 7
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=100.00 E-value=4.4e-108 Score=841.76 Aligned_cols=407 Identities=66% Similarity=1.065 Sum_probs=337.8
Q ss_pred ccceeecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 3 FQKIKVANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 3 ~~~~~m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
++||+|+++|++|||||||||||+++.+.++.++++|+|+++++|++++++||+++|++++++|++++++||||++||..
T Consensus 16 ~~k~~~~~~I~~l~GDgig~evl~~~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~et~~ai~~~da~lkGav~tP~~ 95 (427)
T 2qfy_A 16 FSKIKVKQPVVELDGDEMTRIIWDKIKKKLILPYLDVDLKYYDLSVESRDATSDKITQDAAEAIKKYGVGIKCATITPDE 95 (427)
T ss_dssp CCCEECSSCEEEEECCHHHHHHHHHHHHHHTTTTEECCEEEEECSHHHHHHTTTHHHHHHHHHHHHHSEEEECCCCCCCH
T ss_pred cccccceeeEEEecCCCHHHHHHHHHHHHhccCCCceEEEEEecChHHHhccCCcCcHHHHHHHHHCCEEEECCcCCCCC
Confidence 57999999999999999999999999988888889999999999999999999999999999999999999999999986
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecCC
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEG 162 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~ 162 (414)
.+++|++|.++|+|+|++||+.||||+|+||++++++|++.|++..+++|+||+++|.|.++++.+.++++..+.|.+++
T Consensus 96 ~~~~e~~l~~~~~s~~~~lR~~ldlyan~RP~~~~~~~~l~~g~~~pl~i~R~~~g~~y~~~D~vivREnteg~Y~~~e~ 175 (427)
T 2qfy_A 96 ARVKEFNLHKMWKSPNGTIRNILGGTVFREPIVIPRIPRLVPRWEKPIIIGRHAHGDQYKATDTLIPGPGSLELVYKPSD 175 (427)
T ss_dssp HHHHHTTCSSCCCCHHHHHHHHHCSEEEEEECCCTTSCCSSTTCCEEEEEEEECSSGGGGCEEEEECSSEEEEEEEEESC
T ss_pred cccchhhhcccccchHHHHHHhcCCEEEecccccccchhhccCCCCCeeEeecccCCccCCeeEEEeccCccceeeeccc
Confidence 54445556667999999999999999999999887787776654444444444444444444443333333333333333
Q ss_pred --CCccchhhhccccCCcceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCc
Q 015012 163 --KDEKTELEVYNFTGEGGVALSMYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSK 240 (414)
Q Consensus 163 --g~~~~~~~~~~~~~~~~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~ 240 (414)
|+...+..+.++.+ .++++..++|+++++||+|+||+||++|+++||+|||+|||+.|||+||++|+||++++|||+
T Consensus 176 teG~~~~~~~~~~~~~-~~v~~~~~~T~~~ieRIar~AFe~A~~r~~kVt~v~KaNVlk~s~glfr~v~~eva~~eYpd~ 254 (427)
T 2qfy_A 176 PTTAQPQTLKVYDYKG-SGVAMAMYNTDESIEGFAHSSFKLAIDKKLNLFLSTKNTILKKYDGRFKDIFQEVYEAQYKSK 254 (427)
T ss_dssp TTTSCCEEEEEEEESS-CEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEECTTTSTTHHHHHHHHHHHHHHHHTHHH
T ss_pred cCCccccccccccCCC-ceEEEEEEEcHHHHHHHHHHHHHHHHHhCCceEEEECCccchhhhHHHHHHHHHHHHHhCCCc
Confidence 11000001111112 456665889999999999999999999988999999999999999999999999975699966
Q ss_pred cccCCeEEeeeeHHHHHHHHhhCCCccEEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccc
Q 015012 241 FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRV 320 (414)
Q Consensus 241 ~~~~~I~~~~~~VDa~~~~lv~~P~~fViv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~ 320 (414)
|+.++|+++|+|||+||||||++|++|||||+|||||||||++|+++|||||+||+|+|+++..+||||+||||||++++
T Consensus 255 ~~~~~I~~e~~~VD~~amqlV~~P~~FVivt~NlfGDILSD~aA~l~GslGl~pSanig~~~~~~~fEpvHGSAPdi~~~ 334 (427)
T 2qfy_A 255 FEQLGIHYEHRLIDDMVAQMIKSKGGFIMALKNYDGDVQSDIVAQGFGSLGLMTSILVTPDGKTFESEAAHGTVTRHYRK 334 (427)
T ss_dssp HHHHTCCEEEEEHHHHHHHHHHSCEEEEEEECHHHHHHHHHHHHHHHTCTTSEEEEEECTTSCCEEEECCSCCCHHHHHH
T ss_pred ccCCeEEEEEEEHHHHHHHHHhCCCceEEEECccchHHHHHHHHHhcCcccccceeEeCCCCceeEecCCCCCcccccch
Confidence 66666999999999999999999999999999999999999999999999999999999875238999999999999999
Q ss_pred cccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHh-cCCCccchhhhccCCcCCcccccCHHHHH
Q 015012 321 HQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVE-SGKMTKDLALIIHGSKMTREHYLNTEEFI 399 (414)
Q Consensus 321 dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~-~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 399 (414)
||||||++|||+|+|||++|||+|||+++.|+.+.++|++|++||.+|++ +|++|+|||+.. |+ ..+.+.+||+||+
T Consensus 335 diAGk~~~ANP~A~IlS~ammL~~lg~~~~~~~l~~~A~~Ie~Av~~~l~~~G~~T~Dlgg~~-g~-~~~~~~~~T~e~~ 412 (427)
T 2qfy_A 335 YQKGEETSTNSIASIFAWSRGLLKRGELDNTPALCKFANILESATLNTVQQDGIMTKDLALAC-GN-NERSAYVTTEEFL 412 (427)
T ss_dssp HHTTCCCCCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHT-TC-CSGGGCCCHHHHH
T ss_pred hhcCCCCccCcHHHHHHHHHHHHHhCcccCcchhHHHHHHHHHHHHHHHHhCCCccccccccC-Cc-cccCCCCCHHHHH
Confidence 99999944999999999999999999987777788999999999999999 999999997311 21 0111258999999
Q ss_pred HHHHHHHHHHhhc
Q 015012 400 DAVADDLRARLSG 412 (414)
Q Consensus 400 daV~~~l~~~~~~ 412 (414)
|+|+++|++.|.+
T Consensus 413 daV~~~l~~~l~~ 425 (427)
T 2qfy_A 413 DAVEKRLQKEIKS 425 (427)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887764
No 8
>3u1h_A 3-isopropylmalate dehydrogenase; oxidored; 2.80A {Bacillus SP} PDB: 2ayq_A 1v53_A 1v5b_A
Probab=100.00 E-value=2.6e-107 Score=822.24 Aligned_cols=344 Identities=20% Similarity=0.204 Sum_probs=301.2
Q ss_pred eecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 7 KVANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 7 ~m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
+|+++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+
T Consensus 21 ~M~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~daiL~Gavg~P~~ 100 (390)
T 3u1h_A 21 AMKKKIAVLPGDGIGPEVMEAAIEVLKAVAERFGHEFEFEYGLIGGAAIDEAGTPLPEETLDVCRGSDAILLGAVGGPKW 100 (390)
T ss_dssp ---CEEEEEEESTTHHHHHHHHHHHHHHHHHHHSCCCEEEECCCTHHHHHSSSSSSCHHHHHHHHTSSEEEEEECCCSTT
T ss_pred CccceEEEECCCccCHHHHHHHHHHHHHHHHhcCCCeEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCc
Confidence 78899999999999999999999998654 89999999999999999999999999999999999999999999975
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCCC--CCCCEEEEeeccCCccccccccccCCCccee
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIPG--WTKPICIGRHAFGDQYRATDTVIQGPGKLKL 156 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~~--~~iDivivREnteg~Y~g~e~~~~~~g~~~~ 156 (414)
..++. ....+|.|++|||+||||+|+||+++ ++++ |+++. .++|||||||||||+|+|.++....
T Consensus 101 ~~~~~---~~~~~~~ll~LRk~ldLyANvRP~k~~pg~~~~splk~~~~~~vD~vIVREnTeG~Y~g~~~~~~~------ 171 (390)
T 3u1h_A 101 DQNPS---ELRPEKGLLGIRKGLDLFANLRPVKVYDSLADASPLKKEVIEGVDLVIVRELTGGLYFGEPSERYE------ 171 (390)
T ss_dssp TSSCC---SSSSSCCHHHHHHHTTEEEEEEEEECCGGGTTSSSBCHHHHSSCEEEEEEECSSBSCC-------C------
T ss_pred CCCCc---ccCccchHHHHHHHhCCeEEEEEeeccCCccccCCcccccccCCcEEEEeeCCCCeecCccccccC------
Confidence 32110 01234789999999999999999986 4553 44332 3799999999999999998764210
Q ss_pred eeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHh
Q 015012 157 VFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA 235 (414)
Q Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~ 235 (414)
.+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+||| .||||||++|+||+ +
T Consensus 172 ------------------~g-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVl-~t~glfr~~~~eva-~ 230 (390)
T 3u1h_A 172 ------------------EG-EEAAVDTLLYTREEIERIIRKAFELALTRKKKVTSVDKANVL-ESSRLWREVAEEVA-K 230 (390)
T ss_dssp ------------------TT-CSEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTC-HHHHHHHHHHHHHH-T
T ss_pred ------------------CC-CceEEEEEEecHHHHhHHHHHHHHHHHHcCCceEEEECCccc-ccchHHHHHHHHHH-h
Confidence 01 356777 99999999999999999999998899999999999 69999999999996 7
Q ss_pred hcCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcc
Q 015012 236 NWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTV 314 (414)
Q Consensus 236 ~yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSA 314 (414)
+|| +|++++++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+||||
T Consensus 231 eYP------dV~~~~~~VD~~amqLV~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSA 303 (390)
T 3u1h_A 231 EYP------DVELEHMLVDNAAMQLIRNPRQFDVIVTENMFGDILSDEASMITGSLGMLPSASLSTDG-LGLYEPVHGSA 303 (390)
T ss_dssp TCT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHSCTTTCEEEEEETTS-CEEEEESSCCC
T ss_pred HCC------CCeEEeeeHHHHHHHHHhCcccCcEEEecccchHHHHHHHHHhcCchhhcceeeecCCC-CeeEecCCCCh
Confidence 999 99999999999999999999999 99999999999999999999999999999999865 69999999999
Q ss_pred cccccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCccccc
Q 015012 315 TRHYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYL 393 (414)
Q Consensus 315 P~~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~ 393 (414)
| ||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+||+. .|. +.+
T Consensus 304 P-----DIAGk~i-ANP~A~IlS~amML~~~lg~-------~~~A~~Ie~AV~~vl~~G~~T~Dl~~--gG~-----~~~ 363 (390)
T 3u1h_A 304 P-----DIAGKGI-ANPLATILSAAMMLRYSFGL-------EEEAKAIEKAVEKVLAEGYRTADIAK--PGG-----KYV 363 (390)
T ss_dssp T-----TTTTSSC-SCTHHHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHHTCCBTTTSC--SSC-----CCB
T ss_pred h-----hhcCCCc-CCcHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCcChhhcc--CCC-----Ccc
Confidence 9 9999999 9999999999999999 885 79999999999999999999999931 031 379
Q ss_pred CHHHHHHHHHHHHH
Q 015012 394 NTEEFIDAVADDLR 407 (414)
Q Consensus 394 sT~e~~daV~~~l~ 407 (414)
||+||+|+|+++|+
T Consensus 364 ~T~e~~daV~~~l~ 377 (390)
T 3u1h_A 364 STTEMTDEVKAAVV 377 (390)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999996
No 9
>3flk_A Tartrate dehydrogenase/decarboxylase; cytoplasm, lyase, magnesium, manganese, NAD, oxidoreductase; HET: NAD; 2.00A {Pseudomonas putida} PDB: 3fmx_X*
Probab=100.00 E-value=9e-107 Score=815.56 Aligned_cols=345 Identities=18% Similarity=0.173 Sum_probs=309.1
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCc-hhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGL-PNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~-~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
|+++|++|||||||||||+++++||.+. +++|+|+++++|+ +++++||+++|++++++|+++|++||||++||.+
T Consensus 4 ~~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~ 83 (364)
T 3flk_A 4 HSFRIAAIPGDGIGLEVLPEGIRVLEAAALKHGLALEFDTFEWASCDYYLQHGKMMPDDWAEQLKQYDAIYFGAVGWPDK 83 (364)
T ss_dssp -CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHSSSSCTTHHHHHTTSSEEEEEECCBTTT
T ss_pred CceEEEEECCCcccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCcHHHHhccCCcCCHHHHHHHHHCCEEEECCccCccc
Confidence 5689999999999999999999988543 7999999999999 9999999999999999999999999999999963
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCC--CCCCEEEEeeccCCccccccccccCCCcceeee
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPG--WTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF 158 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~--~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~ 158 (414)
.+ . ...++|+|++|||+||||+|+||+++ ++++ |+++. .++|||||||||||+|+|.++....
T Consensus 84 ~~--~---~~~~~s~~l~LR~~ldlyanvRP~~~~pg~~splk~~~~~~vD~vivREnteG~Y~g~~~~~~~-------- 150 (364)
T 3flk_A 84 VP--D---HISLWGSLLKFRREFDQYVNIRPVRLFPGVPCALANRKVGDIDFVVVRENTEGEYSSLGGIMFE-------- 150 (364)
T ss_dssp BC--H---HHHHHTTHHHHHHHTTCCEEEEEEECCTTCCCSBTTCCTTSSEEEEEEECSSBTCCCCEEEEST--------
T ss_pred CC--C---CcCcccchHHHHHHhCCeEEEEEEeccCCcccccccccCCCCCEEEEeeCCCceecCcCceecc--------
Confidence 11 0 01236889999999999999999986 5665 55443 3799999999999999998764210
Q ss_pred ecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHhh
Q 015012 159 VPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEAN 236 (414)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf~~~~~eva~~~ 236 (414)
+ ++ ++++++ ++|||+++|||+|+||+||++|++ +||+|||+|||+.|+|+|+++|+||+ ++
T Consensus 151 ----~-----------~~-~~~a~~~~~~T~~~~eRIar~AFe~A~~r~~kkVt~v~KaNvlk~s~glf~~~~~eva-~e 213 (364)
T 3flk_A 151 ----N-----------TE-NEIVIQESIFTRRGVDRILKYAFDLAEKRERKHVTSATKSNGMAISMPYWDKRTEAMA-AH 213 (364)
T ss_dssp ----T-----------ST-TCEEEEEEEEEHHHHHHHHHHHHHHHHHSSSCEEEEEECTTTSTTHHHHHHHHHHHHH-TT
T ss_pred ----C-----------CC-CCEEEEEEEECHHHHHHHHHHHHHHHHhcCCCeEEEEECcchhhhHHHHHHHHHHHHH-HH
Confidence 0 11 568888 999999999999999999999977 69999999999999999999999996 79
Q ss_pred cCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCc-eEEEccccCcc
Q 015012 237 WKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTV 314 (414)
Q Consensus 237 yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~-~a~FEp~HGSA 314 (414)
|| +|+++|++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++. ++||||+||||
T Consensus 214 yp------dv~~~~~~vD~~am~lv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~~~~a~fEp~HGSA 287 (364)
T 3flk_A 214 YP------HVSWDKQHIDILCARFVLQPERFDVVVASNLFGDILSDLGPACAGTIGIAPSANLNPERNFPSLFEPVHGSA 287 (364)
T ss_dssp CT------TCEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCSTTCEEEEECTTCSSCEEEEESSCCC
T ss_pred CC------CceEEeeEHHHHHHHHHhCcccCcEEEecccchHHHHHHHHHhcCCcccccccccCCCCCcceEEecCCCCc
Confidence 99 99999999999999999999999 999999999999999999999999999999998752 39999999999
Q ss_pred cccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccC
Q 015012 315 TRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLN 394 (414)
Q Consensus 315 P~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~s 394 (414)
| ||||||+ |||+|+|||++|||+|||.++ +.+.++|++|++||.+++++|++|+||| | .+|
T Consensus 288 P-----diAGk~i-ANP~A~IlS~ammL~~lg~~~--~~~~~~A~~Ie~Av~~~l~~G~~T~Dlg----g-------~~~ 348 (364)
T 3flk_A 288 P-----DIFGKNI-ANPIAMIWSGALMLEFLGQGD--ERYQRAHDDMLNAIERVIADGSVTPDMG----G-------TLS 348 (364)
T ss_dssp T-----TTTTSSC-CCCHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHTCCCGGGT----C-------CCC
T ss_pred h-----hhcCCCc-cCcHHHHHHHHHHHHHhCccc--chhHHHHHHHHHHHHHHHHcCCCCcccC----C-------CcC
Confidence 9 9999999 999999999999999999543 3358999999999999999999999998 7 799
Q ss_pred HHHHHHHHHHHHH
Q 015012 395 TEEFIDAVADDLR 407 (414)
Q Consensus 395 T~e~~daV~~~l~ 407 (414)
|+||+|+|+++|+
T Consensus 349 T~e~~~aV~~~l~ 361 (364)
T 3flk_A 349 TQQVGAAISDTLA 361 (364)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999996
No 10
>3udu_A 3-isopropylmalate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.85A {Campylobacter jejuni} SCOP: c.77.1.1 PDB: 3udo_A
Probab=100.00 E-value=5e-107 Score=815.37 Aligned_cols=337 Identities=21% Similarity=0.205 Sum_probs=304.0
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhH
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~ 85 (414)
++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 7 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~da~L~Gavg~P~~~~~ 86 (361)
T 3udu_A 7 YKVAVLAGDGIGPLVMKEALKILTFIAQKYNFSFELNEAKIGGASIDAYGVALSDETLKLCEQSDAILFGSVGGPKWDNL 86 (361)
T ss_dssp EEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTTS
T ss_pred eeEEEECCCccCHHHHHHHHHHHHHHHHhcCCCEEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCcEEECCcCCCCcCCC
Confidence 89999999999999999999988653 79999999999999999999999999999999999999999999965321
Q ss_pred HHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCC---CCCCCEEEEeeccCCccccccccccCCCcceeee
Q 015012 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIP---GWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF 158 (414)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~---~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~ 158 (414)
+. + .++++++|++|||+||||+|+||+++ ++++ |+++ ..++|||||||||||+|+|.++..
T Consensus 87 ~~-~-~~~~~~~~l~LRk~ldLyaNvRP~~~~pg~~~~splk~~~~~~~vD~vivREnTeG~Y~g~~~~~---------- 154 (361)
T 3udu_A 87 PI-D-QRPERASLLPLRKHFNLFANLRPCKIYESLTHASPLKNEIIQKGVDILCVRELTGGIYFGKQDLG---------- 154 (361)
T ss_dssp CG-G-GSHHHHHHHHHHHHHTCCEEEEEEECCGGGGGGSSBCHHHHTTCCEEEEEEECSSGGGTSCEEEC----------
T ss_pred CC-C-cCccccchHHHHHHcCCEEEEEEeeccCCccccCCCccccccCCCcEEEEcccCCCeecCccCCc----------
Confidence 10 0 11233448999999999999999986 4653 5544 348999999999999999975421
Q ss_pred ecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhc
Q 015012 159 VPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANW 237 (414)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~y 237 (414)
.+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|||+++|+||+ ++|
T Consensus 155 -------------------~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-t~glf~~~~~eva-~ey 213 (361)
T 3udu_A 155 -------------------KESAYDTEIYTKKEIERIARIAFESARIRKKKVHLIDKANVLA-SSILWREVVANVA-KDY 213 (361)
T ss_dssp -------------------SSEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTCH-HHHHHHHHHHHHG-GGC
T ss_pred -------------------CceEEEEEeccHHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-cchHHHHHHHHHH-HHC
Confidence 346777 999999999999999999999988999999999996 9999999999996 699
Q ss_pred CCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccc
Q 015012 238 KSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTR 316 (414)
Q Consensus 238 p~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~ 316 (414)
| +|+++|++||+||||||++|++| ||||+|||||||||++|+++||+||+||+|+|+++ ++||||+|||||
T Consensus 214 p------dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP- 285 (361)
T 3udu_A 214 Q------DINLEYMYVDNAAMQIVKNPSIFDVMLCSNLFGDILSDELAAINGSLGLLSSASLNDKG-FGLYEPAGGSAP- 285 (361)
T ss_dssp T------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHCCGGGCEEEEECTTS-CEEEEESSCCCG-
T ss_pred C------CCeEEeeeHHHHHHHHHhCcccCcEEEecchhHHHHHHHHHHhcCchhhcceeeeCCCC-CeeeecCCCChh-
Confidence 9 99999999999999999999999 99999999999999999999999999999999876 699999999999
Q ss_pred cccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCH
Q 015012 317 HYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNT 395 (414)
Q Consensus 317 ~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT 395 (414)
||||||+ |||+|+|||++|||+| +|+ .++|++|++||.+|+++|++|+||| |. +.+||
T Consensus 286 ----dIAGk~i-ANP~A~IlS~amML~~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlg----G~-----~~~~T 344 (361)
T 3udu_A 286 ----DIAHLNI-ANPIAQILSAALMLKYSFKE-------EQAAQDIENAISLALAQGKMTKDLN----AK-----SYLNT 344 (361)
T ss_dssp ----GGTTSSC-CCCHHHHHHHHHHHHHTSCC-------HHHHHHHHHHHHHHHHTTCCCTTTC----SS-----SCCCH
T ss_pred ----hhcCCCc-cCCHHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCcCcCCC----CC-----CccCH
Confidence 9999999 9999999999999999 885 7999999999999999999999998 52 37999
Q ss_pred HHHHHHHHHHHHH
Q 015012 396 EEFIDAVADDLRA 408 (414)
Q Consensus 396 ~e~~daV~~~l~~ 408 (414)
+||+|+|+++|++
T Consensus 345 ~e~~~aV~~~l~~ 357 (361)
T 3udu_A 345 DEMGDCILEILKE 357 (361)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999964
No 11
>3vmk_A 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase; HET: IPM; 1.48A {Shewanella benthica} PDB: 3vml_A* 3vmj_A* 3vl2_A* 3vkz_A* 3vl4_A* 3vl6_A* 3vl7_A* 3vl3_A*
Probab=100.00 E-value=6.9e-107 Score=817.87 Aligned_cols=347 Identities=20% Similarity=0.191 Sum_probs=307.2
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCch
Q 015012 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEA 83 (414)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~ 83 (414)
-+++|++|||||||||||+++++||.+. +++|+|+++++|++++++||++||++++++|+++|++||||+++|.+.
T Consensus 12 ~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~g~~~~~~~~~~G~~~~~~~G~~lp~etl~~~~~~da~L~Gavg~P~~~ 91 (375)
T 3vmk_A 12 SSYQIAVLAGDGIGPEVMAEARKVLAAVEKRFDLSIEYSEYDVGGAAIDNHGCPLPEATLKGCEAADAVLFGSVGGPKWE 91 (375)
T ss_dssp SCEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGT
T ss_pred CcceEEEECCCcccHHHHHHHHHHHHHHHHhcCCCEEEEEEECCHHHHHhhCCcCCHHHHHHHHHCCeEEECCcCCCCcc
Confidence 4699999999999999999999988543 799999999999999999999999999999999999999999999753
Q ss_pred hHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCC---CCCCCEEEEeeccCCccccccccccCCCccee
Q 015012 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIP---GWTKPICIGRHAFGDQYRATDTVIQGPGKLKL 156 (414)
Q Consensus 84 ~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~---~~~iDivivREnteg~Y~g~e~~~~~~g~~~~ 156 (414)
.++ +..++++++|++|||+||||+|+||+++ ++++ |+++ ..++|||||||||||+|+|.++....
T Consensus 92 ~~~--~~~~~~~~~~l~LRk~ldLyaNvRP~~~~pg~~~~splk~~~~~~~vD~vIvREnTeG~Y~g~~~~~~~------ 163 (375)
T 3vmk_A 92 HLP--PNDQPERGALLPLRGHFELFCNMRPAKLHPGLEHMSPLRSDISEKGFDILCVRELTGGIYFGKPKGRQG------ 163 (375)
T ss_dssp TSC--STTSHHHHHHHHHHHHTTCCEEEEEEECCTTCGGGSSBCHHHHTTCCEEEEEEECSSBTTTCSSCEEEC------
T ss_pred CCC--ccccccccchHHHHHHcCCeEEEEEEeccCCCcccCCCCcccccCCCCEEEEeeCCCCEecCCcccccc------
Confidence 211 0112345568999999999999999986 5664 5554 35899999999999999998653210
Q ss_pred eeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHh
Q 015012 157 VFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA 235 (414)
Q Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~ 235 (414)
+ .+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|||+++|+||+ +
T Consensus 164 ----~-------------~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNvl~-~~glf~~~~~eva-~ 223 (375)
T 3vmk_A 164 ----E-------------GE-NEEAFDTMRYSRKEIRRIAKIAFESAQGRRKKVTSVDKANVLA-CSVLWREVVEEVA-K 223 (375)
T ss_dssp ----C-------------GG-GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-T
T ss_pred ----C-------------CC-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCcEEEEECchhhh-hhhHHHHHHHHHH-H
Confidence 0 01 457887 999999999999999999999988999999999998 6799999999996 6
Q ss_pred hcCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcc
Q 015012 236 NWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTV 314 (414)
Q Consensus 236 ~yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSA 314 (414)
+|| +|++++++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+||||
T Consensus 224 eyp------dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSA 296 (375)
T 3vmk_A 224 DYP------DVELEHIYIDNATMQLLRRPNEFDVMLCSNLFGDIVSDEIAMLTGSMGLLASISMNSQG-FGMYEPAGGSA 296 (375)
T ss_dssp TCT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCC
T ss_pred HCC------CceEeeeeHHHHHHHHHhCcccCcEEEECchhHHHHHHHHHHhcCCccccceeeeCCCC-ceEEecCCCCc
Confidence 999 99999999999999999999999 99999999999999999999999999999999885 59999999999
Q ss_pred cccccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCccccc
Q 015012 315 TRHYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYL 393 (414)
Q Consensus 315 P~~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~ 393 (414)
| ||||||+ |||+|+|||++|||+| +|+ .++|++|++||.+|+++|++|+||++.++| .+.+
T Consensus 297 P-----dIAGk~i-ANP~A~IlS~amML~~~lg~-------~~~A~~Ie~AV~~~l~~G~~T~Dl~g~~~G-----~~~~ 358 (375)
T 3vmk_A 297 P-----DIAGQGI-ANPVAQILSAALLLRHSLKL-------EDAALAIEAAVSKALSDGYLTCELLPASER-----SQAK 358 (375)
T ss_dssp T-----TTTTSSC-SCCHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHTTCCCGGGSCGGGG-----GGCC
T ss_pred h-----hccCCCc-cCcHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCCCchhccCCCC-----CCcc
Confidence 9 9999999 9999999999999999 885 799999999999999999999999411113 1369
Q ss_pred CHHHHHHHHHHHHH
Q 015012 394 NTEEFIDAVADDLR 407 (414)
Q Consensus 394 sT~e~~daV~~~l~ 407 (414)
||+||+|+|+++|+
T Consensus 359 ~T~e~~~aV~~~l~ 372 (375)
T 3vmk_A 359 STSQMGDYIAQAIA 372 (375)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999985
No 12
>3ty4_A Probable homoisocitrate dehydrogenase; B-hydroxyacid oxidative decarboxylase, amino-acid biosynthes lysine biosynthesis; 1.55A {Schizosaccharomyces pombe} SCOP: c.77.1.0 PDB: 3ty3_A
Probab=100.00 E-value=3.4e-106 Score=810.57 Aligned_cols=333 Identities=20% Similarity=0.236 Sum_probs=304.2
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHc-CCeeeecccCCCCch
Q 015012 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLK-YNVAIKCATITPDEA 83 (414)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~-~~v~lkg~~~tp~~~ 83 (414)
.++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|++ +|++||||+++|.+.
T Consensus 10 ~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~~~~~da~L~Gavg~P~~~ 89 (366)
T 3ty4_A 10 RIVLGLIPADGIGKEVVPAARRLMENLPAKHKLKFDFIDLDAGWGTFERTGKALPERTVERLKTECNAALFGAVQSPTHK 89 (366)
T ss_dssp EEEEEEEEESTTHHHHHHHHHHHHHTCCGGGCCEEEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCSEEEEEECCCCSSC
T ss_pred ceEEEEECCCccCHHHHHHHHHHHHHHHHhcCCceEEEEecchHHHHHhhCCCCCHHHHHHHHHhCCEEEECCccCCCCC
Confidence 489999999999999999999998653 689999999999999999999999999999999 699999999999754
Q ss_pred hHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecCCC
Q 015012 84 RVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGK 163 (414)
Q Consensus 84 ~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g 163 (414)
. .+++|+|++|||+||||+|+||+++ +|++. ..++|||||||||||+|+|.++.... +
T Consensus 90 ~-------~~~~s~~l~LRk~ldlyaNvRP~~~--~~g~~-~~~vD~vivREnTeG~Y~g~e~~~~~------------~ 147 (366)
T 3ty4_A 90 V-------AGYSSPIVALRKKMGLYANVRPVKS--LDGAK-GKPVDLVIVRENTECLYVKEERMVQN------------T 147 (366)
T ss_dssp C-------TTCCCHHHHHHHHTTCCEEEEEEEC--CTTCS-SSCCEEEEEEECSCBGGGCCEEEEEC------------C
T ss_pred C-------cccccchHHHHHHhCCeEEEEEEec--cCCCC-CCCCcEEEEeeCCCCEeecCcceecc------------C
Confidence 2 1678999999999999999999864 45552 12699999999999999998874310 0
Q ss_pred CccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-------------CCCEEEEeCCCcccccchHHHHHH
Q 015012 164 DEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-------------KWPLYLSTKNTILKKYDGRFKDIF 229 (414)
Q Consensus 164 ~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-------------~~~Vt~v~KaNvl~~tdglf~~~~ 229 (414)
++ ++++++ ++|||+++|||+|+||+||++| +++||+|||+|||+.|+||||++|
T Consensus 148 -----------~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~~~~~~~~~~~~~rkkVt~v~KaNVl~~s~glf~~~~ 215 (366)
T 3ty4_A 148 -----------PG-KRVAEAIRRISEEASTKIGKMAFEIAKSRQKIRESGTYSIHKKPLVTIIHKSNVMSVTDGLFRESC 215 (366)
T ss_dssp -----------TT-CCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHTTCCCSCSSCEEEEEECTTTCTTHHHHHHHHH
T ss_pred -----------CC-CceEEEEEEecHHHHHHHHHHHHHHHHhcCccccccccccCCCCeEEEEECCcchHhHHHHHHHHH
Confidence 11 568888 9999999999999999999998 568999999999999999999999
Q ss_pred HHHH--HhhcCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEE
Q 015012 230 QEVY--EANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIE 306 (414)
Q Consensus 230 ~eva--~~~yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~ 306 (414)
+||+ +++|| +|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ ++|
T Consensus 216 ~ev~~~a~eyp------dV~~~~~~VD~~am~lv~~P~~FDViVt~NlfGDILSD~aa~l~GslGl~pSanig~~--~a~ 287 (366)
T 3ty4_A 216 RHAQSLDPSYA------SINVDEQIVDSMVYRLFREPECFDVVVAPNLYGDILSDGAASLIGSLGLVPSANVGDN--FVM 287 (366)
T ss_dssp HHHGGGCGGGT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHGGGSCGGGCCCEEECSS--CEE
T ss_pred HHHHHhHhhCC------CceEEeeeHHHHHHHHHhCcccCcEEEECccchHHHHHHHHHhcCchhhhcceeeCCC--ceE
Confidence 9994 47999 99999999999999999999999 9999999999999999999999999999999976 699
Q ss_pred EccccCcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC-CCccchhhhccCC
Q 015012 307 AEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGS 385 (414)
Q Consensus 307 FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G-~~T~Dlg~~~~G~ 385 (414)
|||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| |
T Consensus 288 fEpvHGSAP-----dIaGk~i-ANP~A~IlS~amML~~lg~-------~~~A~~Ie~Av~~~l~~G~~~T~Dlg----g- 349 (366)
T 3ty4_A 288 SEPVHGSAP-----DIAGRGI-ANPVATFRSVALMLEFMGH-------QDAAADIYTAVDKVLTEGKVLTPDLG----G- 349 (366)
T ss_dssp ECCSSCCCT-----TTTTSSC-CCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHCSSCCGGGT----S-
T ss_pred EecCCCChh-----hcCCCCc-cCcHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCccCcccC----C-
Confidence 999999999 9999999 9999999999999999885 799999999999999999 9999998 7
Q ss_pred cCCcccccCHHHHHHHHHHHHH
Q 015012 386 KMTREHYLNTEEFIDAVADDLR 407 (414)
Q Consensus 386 ~~~~~~~~sT~e~~daV~~~l~ 407 (414)
.+||+||+|+|+++|+
T Consensus 350 ------~~~T~e~~daV~~~l~ 365 (366)
T 3ty4_A 350 ------KSGTNEITDAVLANIH 365 (366)
T ss_dssp ------CCCHHHHHHHHHHHC-
T ss_pred ------CcCHHHHHHHHHHHhh
Confidence 7999999999999874
No 13
>3dms_A Isocitrate dehydrogenase [NADP]; struc genomics, seattle structural genomics center for infectious ssgcid, glyoxylate bypass, manganese; 1.65A {Burkholderia pseudomallei} SCOP: c.77.1.1 PDB: 1pb1_A* 1ai3_A* 1ika_A* 1ai2_A* 1p8f_A* 1pb3_A 1sjs_A 3icd_A 3lcb_C* 4aj3_A* 4aja_A* 4icd_A* 5icd_A* 9icd_A* 1bl5_A* 1cw7_A* 1idd_A 1ide_A* 1hj6_A* 7icd_A ...
Probab=100.00 E-value=2.7e-106 Score=826.66 Aligned_cols=363 Identities=19% Similarity=0.191 Sum_probs=308.5
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCC--CCCHHHHHHHHcCCeeeecccC
Q 015012 8 VANPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATI 78 (414)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~G~~~~~~~g~--~lp~~~~dai~~~~v~lkg~~~ 78 (414)
++++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+ +||++++++|+++|++||||++
T Consensus 35 ~~~~I~vipGDGIGpEV~~~a~~Vl~aa~~~~~~~~~~i~~~~~~~G~~a~~~~G~~~~lp~etl~~~k~~da~l~G~~~ 114 (427)
T 3dms_A 35 DQPIIPYIEGDGTGFDITPVMIKVVDAAVEKAYGGKKKIHWMEIYAGEKATKVYGPDVWLPEETLQVLKEYVVSIKGPLT 114 (427)
T ss_dssp SSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHTCEEEECCCC
T ss_pred CCCEEEEECCCcccHHHHHHHHHHHHHHHHHhcCCCCceEEEEEeCCHHHHHhcCCCCCCCHHHHHHHHhcCEEEECCCC
Confidence 3588999999999999999999988653 379999999999999999999 9999999999999999999999
Q ss_pred CCCchhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCccee
Q 015012 79 TPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKL 156 (414)
Q Consensus 79 tp~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~ 156 (414)
||... +++|+|++|||+||||+|+||+++ ++++ |+++..++|||||||||||+|+|+|+....++..++
T Consensus 115 tP~~~---------~~~s~~l~LRk~LdLyaNlRPv~~~pg~~splk~~~~vDivIvREnTeG~Y~G~e~~~~~~~~~~~ 185 (427)
T 3dms_A 115 TPVGG---------GIRSLNVALRQELDLYVCLRPIQYFKGVPSPVREPEKTNMVIFRENSEDIYAGIEWAAESEQAKKV 185 (427)
T ss_dssp CCC-------------CCHHHHHHHHTTCCEEEEEECCCTTCCCSSSCGGGCCEEEEEECSSGGGGCCEECTTCHHHHHH
T ss_pred CCCCc---------ccCChhHHHHHHhCCeEEEEEeecCCCCCCCCCCCCCceEEEEEECCCCEecCcccccCCcccccc
Confidence 99753 678999999999999999999986 4665 454435899999999999999999875321110000
Q ss_pred -eee-cCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCC-CCEEEEeCCCcccccchHHHHHHHHH
Q 015012 157 -VFV-PEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKK-WPLYLSTKNTILKKYDGRFKDIFQEV 232 (414)
Q Consensus 157 -~~~-~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~-~~Vt~v~KaNvl~~tdglf~~~~~ev 232 (414)
.|. .+.|. ....+ .++++++ ++|||+++|||+|+||+||++|+ ++||+|||+|||+.|||+||++|+||
T Consensus 186 ~~~~~~~~g~-----~~~~~--~~~~a~~~~~~Tr~~~eRIar~AFe~A~~r~rkkVT~V~KaNVlk~tdglfr~~~~ev 258 (427)
T 3dms_A 186 IKFLQEEMGV-----KKIRF--PQTSGIGIKPVSKEGTERLVRKAIQYAIDNDRKSVTLVHKGNIMKFTEGAFRDAGYAL 258 (427)
T ss_dssp HHHHHHTSCC-----CCCSC--GGGCCEECCCCCHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHHHHHHHHH
T ss_pred cccccccccc-----ccccc--CCcceEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhHHHHHHHHHH
Confidence 000 00000 00000 1467888 99999999999999999999985 57999999999999999999999999
Q ss_pred HHhhcCCc-------------cccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCcccccccee
Q 015012 233 YEANWKSK-------------FEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLV 298 (414)
Q Consensus 233 a~~~yp~~-------------~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSani 298 (414)
|+++|||. ++..+|+++++|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+
T Consensus 259 a~~eypdv~~~~~~~~~~~~~~~~~~V~~~~~~VD~~amqlv~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSani 338 (427)
T 3dms_A 259 AQKEFGAELIDGGPWMKFKNPKTGNEIVVKDSIADAFLQQILLRPAEYDVIATLNLNGDYISDALAAQVGGIGIAPGANL 338 (427)
T ss_dssp HHHHHCCEESTTSSCEEEECTTTCCEEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTTCTTTCEEEEE
T ss_pred HHHhCCccccccccccccccccccCceEEEEeeHHHHHHHHhhCcccceEEEEcccccHHHHHHHHHhcCCccccceeee
Confidence 85579952 233469999999999999999999999 9999999999999999999999999999999
Q ss_pred cCCCceEEEccccCcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccch
Q 015012 299 CPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL 378 (414)
Q Consensus 299 g~~~~~a~FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dl 378 (414)
|++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+|+++|++|+||
T Consensus 339 g~~--~a~fEpvHGSAP-----dIAGk~i-ANP~A~IlS~amML~~lg~-------~~~A~~Ie~AV~~vl~~G~~T~Dl 403 (427)
T 3dms_A 339 SDS--VAMFEATHGTAP-----KYAGKDY-VNPGSEILSAEMMLRHLGW-------TEAADVIISAMEKSIKQKRVTYDF 403 (427)
T ss_dssp CSS--CEEEEECSCCCG-----GGTTSSC-SCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHTEECHHH
T ss_pred CCC--cceEEeccCChh-----hhcCCCc-CCcHHHHHHHHHHHHhcCC-------HHHHHHHHHHHHHHHHcCCcchhh
Confidence 977 599999999999 9999999 9999999999999999885 799999999999999999999999
Q ss_pred hhhccCCcCCcccccCHHHHHHHHHHHH
Q 015012 379 ALIIHGSKMTREHYLNTEEFIDAVADDL 406 (414)
Q Consensus 379 g~~~~G~~~~~~~~~sT~e~~daV~~~l 406 (414)
|+.++| .+.+||+||+|+|+++|
T Consensus 404 gg~~~g-----~~~~~T~e~~daV~~~l 426 (427)
T 3dms_A 404 ARLMEG-----ATQVSCSGFGQVLIENM 426 (427)
T ss_dssp HTTSSS-----CEECCHHHHHHHHHHTT
T ss_pred ccccCC-----CCccCHHHHHHHHHHhh
Confidence 832222 13699999999999876
No 14
>2y3z_A 3-isopropylmalate dehydrogenase; oxidoreductase, LEUB, leucine biosynthesis; HET: 2PE; 1.83A {Thermus thermophilus} PDB: 2y40_A 2y41_A* 2y42_A* 1xaa_A 1osi_A 1hex_A 1xab_A 2ztw_A* 1g2u_A 1gc9_A 1osj_A 1ipd_A 1gc8_A 1wal_A 1dpz_A 1dr0_A 1dr8_A 1idm_A 1xac_A 1xad_A
Probab=100.00 E-value=3.7e-106 Score=809.17 Aligned_cols=336 Identities=18% Similarity=0.173 Sum_probs=303.1
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchh
Q 015012 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (414)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~ 84 (414)
+++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||||++||.+..
T Consensus 3 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~P~~~~ 82 (359)
T 2y3z_A 3 SMKVAVLPGDGIGPEVTEAALKVLRALDEAEGLGLAYEVFPFGGAAIDAFGEPFPEPTRKGVEEAEAVLLGSVGGPKWDG 82 (359)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEECCCCCGGGTT
T ss_pred ccEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeccHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCcccc
Confidence 379999999999999999999998654 7899999999999999999999999999999999999999999997542
Q ss_pred HHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCC--CCCCCEEEEeeccCCccccccccccCCCcceeee
Q 015012 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIP--GWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF 158 (414)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~--~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~ 158 (414)
+++ + .++++| |++|||+||||+|+||+++ ++++ |+++ ..++|||||||||||+|+|.++..
T Consensus 83 ~~~-~-~~~~~~-~l~LR~~ldlyanvRP~~~~pgl~~~splk~~~~~~iD~vivREnteg~Y~g~e~~~---------- 149 (359)
T 2y3z_A 83 LPR-K-IRPETG-LLSLRKSQDLFANLRPAKVFPGLERLSPLKEEIARGVDVLIVRELTGGIYFGEPRGM---------- 149 (359)
T ss_dssp SCG-G-GCHHHH-HHHHHHHTTEEEEEEEEECCTTCGGGSSSCHHHHTTCEEEEEEECSCSTTTCSSCEE----------
T ss_pred CCc-c-cccchh-HHHHHHHhCCEEEEEEeeccCCCCCCCCcccccCCCceEEEEecCccceEecCCCcC----------
Confidence 221 1 113456 8999999999999999986 3442 3332 136999999999999999976521
Q ss_pred ecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhc
Q 015012 159 VPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANW 237 (414)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~y 237 (414)
+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|+|+++|+||+ ++|
T Consensus 150 -----------------~-~~~a~~~~~~T~~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva-~ey 209 (359)
T 2y3z_A 150 -----------------S-EAEAWNTERYSKPEVERVARVAFEAARKRRKHVVSVDKANVLE-VGEFWRKTVEEVG-RGY 209 (359)
T ss_dssp -----------------C-SSCEECCCCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TTC
T ss_pred -----------------C-CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-ccHHHHHHHHHHH-HHC
Confidence 1 356777 999999999999999999999988899999999999 9999999999997 799
Q ss_pred CCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccc
Q 015012 238 KSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTR 316 (414)
Q Consensus 238 p~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~ 316 (414)
| +|++++++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ +||||+|||||
T Consensus 210 p------dI~~~~~~VD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig~~~--~~fEpvHGSAP- 280 (359)
T 2y3z_A 210 P------DVALEHQYVDAMAMHLVRSPARFDVVVTGNIFGDILSDLASVLPGSLGLLPSASLGRGT--PVFEPVHGSAP- 280 (359)
T ss_dssp T------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTSCGGGCEEEEEESSC--CEEEESSCCCG-
T ss_pred C------cEEEEeeEHHHHHHHHhhCcccccEEEEcCcchHHHHHHHHHhcCcccccceeEeCCCC--ceeecCCCChh-
Confidence 9 99999999999999999999999 99999999999999999999999999999999885 69999999999
Q ss_pred cccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCH
Q 015012 317 HYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNT 395 (414)
Q Consensus 317 ~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT 395 (414)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++| +|+||| | .+||
T Consensus 281 ----diAGk~i-ANP~A~IlS~ammL~~slg~-------~~~A~~Ie~Av~~~l~~g-~T~Dlg----g-------~~~T 336 (359)
T 2y3z_A 281 ----DIAGKGI-ANPTAAILSAAMMLEHAFGL-------VELARKVEDAVAKALLET-PPPDLG----G-------SAGT 336 (359)
T ss_dssp ----GGTTSSC-SCTHHHHHHHHHHHHHTTCC-------HHHHHHHHHHHHHHHHHS-CCGGGT----C-------CCCH
T ss_pred ----hhCCCCC-cCCHHHHHHHHHHHHHhcCC-------hHHHHHHHHHHHHHHHcC-CCCccC----C-------CCCH
Confidence 9999999 9999999999999999 986 789999999999999999 999998 7 6899
Q ss_pred HHHHHHHHHHHHHHh
Q 015012 396 EEFIDAVADDLRARL 410 (414)
Q Consensus 396 ~e~~daV~~~l~~~~ 410 (414)
+||+|+|+++|++.+
T Consensus 337 ~e~~daV~~~l~~~~ 351 (359)
T 2y3z_A 337 EAFTATVLRHLAAAA 351 (359)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999996543
No 15
>2iv0_A Isocitrate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, domain swapping, phosphorylation, aromatic cluster, NADP; 2.5A {Archaeoglobus fulgidus}
Probab=100.00 E-value=1e-105 Score=819.17 Aligned_cols=365 Identities=22% Similarity=0.229 Sum_probs=313.5
Q ss_pred cceeec--ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeeccc
Q 015012 4 QKIKVA--NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCAT 77 (414)
Q Consensus 4 ~~~~m~--~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~ 77 (414)
+|++|. ++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||||+
T Consensus 20 ~~~~vp~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav 99 (412)
T 2iv0_A 20 GKLIVPDNPIIPYFEGDGIGKDVVPAAIRVLDAAADKIGKEVVWFQVYAGEDAYKLYGNYLPDDTLNAIKEFRVALKGPL 99 (412)
T ss_dssp TEEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCSHHHHHHHSCSSCHHHHHHHHHHCEEEECCC
T ss_pred CeEeCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCc
Confidence 444442 66999999999999999999998765 799999999999999999999999999999999999999999
Q ss_pred CCCCchhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCcce
Q 015012 78 ITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLK 155 (414)
Q Consensus 78 ~tp~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~ 155 (414)
+||... +++|+|++|||.||||+|+||+++ +++| |+++..++|||||||||||+|+|+++....++..+
T Consensus 100 ~tP~~~---------~~~s~~l~LR~~Ldlyan~RPv~~~~g~~splk~~~~vDivIvREnTeg~Y~G~e~~~~~~~~~~ 170 (412)
T 2iv0_A 100 TTPVGG---------GYRSLNVTIRQVLDLYANVRPVYYLKGVPSPIKHPEKVNFVIFRENTEDVYAGIEWPRGSEEALK 170 (412)
T ss_dssp CCCSSS---------SSSHHHHHHHHHTTCCEEEEEEECCTTSCCSBSCGGGCEEEEEEECSSSGGGCCEECTTCHHHHH
T ss_pred cCCCCc---------cccChhHHHHHHcCCeEEEEEEEecCCCCCCCCCcCCCCEEEEecCCCCEeCCcccccCCccccc
Confidence 999642 688999999999999999999986 6776 44432369999999999999999987532111110
Q ss_pred e-eeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHH
Q 015012 156 L-VFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEV 232 (414)
Q Consensus 156 ~-~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf~~~~~ev 232 (414)
+ .|.++ +.. ..+ + ++++++ ++|||++++||+|+||+||++|++ +||+|||+|||+.|+|+|+++|+||
T Consensus 171 v~~~~~~------~~~-~~~-~-~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~~~~ev 241 (412)
T 2iv0_A 171 LIRFLKN------EFG-VTI-R-EDSGIGIKPISEFATKRLVRMAIRYAIENNRKSVTLVHKGNIMKYTEGAFRDWGYEV 241 (412)
T ss_dssp HHHHHHH------HHC-CCC-C-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTCTTTHHHHHHHHHHH
T ss_pred hhhcccc------ccc-ccC-C-CceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhHHHHHHHHHH
Confidence 0 01000 000 001 1 467888 999999999999999999999965 6999999999999999999999999
Q ss_pred HHhhcCCcc--------------ccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccce
Q 015012 233 YEANWKSKF--------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297 (414)
Q Consensus 233 a~~~yp~~~--------------~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSan 297 (414)
|+++|||++ +.++|+++|++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|
T Consensus 242 a~~eypd~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapsan 321 (412)
T 2iv0_A 242 AKQEFGEYCITEDELWDKYGGKQPEGKIVVKDRIADNMFQQILTRTDEYDVIALPNLNGDYLSDAAAALIGGLGIAPGSN 321 (412)
T ss_dssp HHHHSTTTEECHHHHHHHHTTCCCTTCEEEEEEEGGGHHHHHHHSGGGCCEEEECHHHHHHHHHHHHHHTTCGGGCEEEE
T ss_pred HHHhCCCccccccchhhhccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCccccceEE
Confidence 755999643 22349999999999999999999999 999999999999999999999999999999
Q ss_pred ecCCCceEEEccccCcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccc
Q 015012 298 VCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKD 377 (414)
Q Consensus 298 ig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~D 377 (414)
+|+. ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++|++|+|
T Consensus 322 ig~~--~a~fEp~HGSAP-----diAGk~i-ANP~A~IlS~amML~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~D 386 (412)
T 2iv0_A 322 IGDG--IGVFEPVHGSAP-----KYAGQNK-VNPTAEILTGALMFEYIGW-------KDASEMIKKAVEMTISSGIVTYD 386 (412)
T ss_dssp EETT--EEEEEESSCCCS-----TTTTSSC-SCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHTTEECHH
T ss_pred ECCC--ceEEeCCCCChh-----hcCCCcc-cCcHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCcccc
Confidence 9965 699999999999 9999999 9999999999999999986 79999999999999999999999
Q ss_pred hhhhccCCcCCcccccCHHHHHHHHHHHHH
Q 015012 378 LALIIHGSKMTREHYLNTEEFIDAVADDLR 407 (414)
Q Consensus 378 lg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 407 (414)
|+..+ |. +.+||+||+|+|+++|+
T Consensus 387 l~~~~-G~-----~~~~T~e~~daV~~~l~ 410 (412)
T 2iv0_A 387 IHRHM-GG-----TKVGTREFAEAVVENLQ 410 (412)
T ss_dssp HHHHH-CS-----EECCHHHHHHHHHHHHH
T ss_pred ccccc-CC-----CCcCHHHHHHHHHHHHh
Confidence 97322 21 36899999999999996
No 16
>2e0c_A 409AA long hypothetical NADP-dependent isocitrate dehydrogenase; homedimer, oxidoreductase; 2.00A {Sulfolobus tokodaii str} PDB: 2dht_A 2e5m_A*
Probab=100.00 E-value=2.4e-105 Score=816.49 Aligned_cols=365 Identities=21% Similarity=0.230 Sum_probs=308.2
Q ss_pred cceeec--ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeee
Q 015012 4 QKIKVA--NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIK 74 (414)
Q Consensus 4 ~~~~m~--~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lk 74 (414)
+|++|. ++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||
T Consensus 17 ~~~~vp~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~Lk 96 (409)
T 2e0c_A 17 GKWIVPNKPVILYIEGDGIGPEITNAAIKVINKAVERAYGSSREIKWLEVYAGEKAEKLVNDRFPKETQEMLLKYRVVLK 96 (409)
T ss_dssp SCEECCSSBEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEE
T ss_pred CeEecCCCceEeeCCCCCcCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEechHHHHHhhCCcCCHHHHHHHHHCCEEEE
Confidence 455553 57999999999999999999988653 389999999999999999999999999999999999999
Q ss_pred cccCCCCchhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCC
Q 015012 75 CATITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPG 152 (414)
Q Consensus 75 g~~~tp~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g 152 (414)
||++||... +|+|+|++|||.||||+|+||+++ +++| |+++..++|||||||||||+|+|.++....++
T Consensus 97 Gav~tP~~~---------~~~s~~l~LR~~LdlyanvRPv~~~~g~~splk~~~~vDivIvREnteg~Y~g~e~~~~~~~ 167 (409)
T 2e0c_A 97 GPLETPIGK---------GWKSVNVAIRLMLDLYANIRPVKYIEGLESPLKHPEKVDMIIFRENTDDLYRGIEYPFNSEE 167 (409)
T ss_dssp CCCC-----------------CHHHHHHHHTTCCEEEEEEECCTTCCCSBSCCTTCEEEEEEECSSGGGGCCEECTTSHH
T ss_pred CCccCCCcc---------cccChhHHHHHHcCCEEEEEEEeccCCCCCCCCCccCCcEEEEEcCCCCEeCCcccccCCCc
Confidence 999999642 678999999999999999999985 6776 44443379999999999999999987532111
Q ss_pred ccee-eeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHH
Q 015012 153 KLKL-VFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIF 229 (414)
Q Consensus 153 ~~~~-~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf~~~~ 229 (414)
..++ .|.++ +.. ..+ + ++++++ ++|||++++||+|+||+||++|++ +||+|||+|||+.|+|+|+++|
T Consensus 168 ~~~v~~f~~~------~~~-~~~-~-~~~a~~~~~~t~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~sdglf~~~~ 238 (409)
T 2e0c_A 168 AKKIRDFLRK------ELK-VEI-E-DDTGIGIKVMSKYKTQRITRLAIQYAIEHKRKKVTIMHKGNVMKYTEGAFREWA 238 (409)
T ss_dssp HHHHHHHHHH------HSC-CCC-C-SSEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTTHHHHHHHH
T ss_pred ccchhhccch------hcc-ccC-C-CceEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECccchhhhhhHHHHHH
Confidence 1111 01100 000 001 1 467888 999999999999999999999955 6999999999999999999999
Q ss_pred HHHHHhhcCCcc-----------ccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccce
Q 015012 230 QEVYEANWKSKF-----------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVL 297 (414)
Q Consensus 230 ~eva~~~yp~~~-----------~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSan 297 (414)
+||++++|||+| +..+|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|
T Consensus 239 ~eva~~eypd~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSan 318 (409)
T 2e0c_A 239 YEVALKEYRDFIVTEEEINQGKPDQGKIILNDRIADNMFQQIIIRPEEYDIILAPNVNGDYISDAAGALIGNIGMLGGAN 318 (409)
T ss_dssp HHHHHHHSTTTEEEHHHHTTTCCCTTSEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEE
T ss_pred HHHHHHhCCCccccccccccccccCCeEEEEEEEHHHHHHHHhhCcccccEEEECCcchHHHHHHHHHhcCCcccCceEE
Confidence 999754999643 22349999999999999999999999 999999999999999999999999999999
Q ss_pred ecCCCceEEEccccCcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccc
Q 015012 298 VCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKD 377 (414)
Q Consensus 298 ig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~D 377 (414)
+|+. ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+|+++|++|+|
T Consensus 319 ig~~--~a~fEp~HGSAP-----diAGk~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~D 383 (409)
T 2e0c_A 319 IGDE--GGMFEAIHGTAP-----KYAGKNV-ANPTGIIKAGELMLRWMGW-------NEAADLIEKAINMAIRDKKVTQD 383 (409)
T ss_dssp EETT--EEEEEESSCCCG-----GGTTTTC-SCTHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ECCC--ceEEecCCCChh-----hhcCCcc-cCcHHHHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHcCCcccc
Confidence 9976 699999999999 9999999 9999999999999999996 79999999999999999999999
Q ss_pred hhhhccCCcCCcccccCHHHHHHHHHHHHH
Q 015012 378 LALIIHGSKMTREHYLNTEEFIDAVADDLR 407 (414)
Q Consensus 378 lg~~~~G~~~~~~~~~sT~e~~daV~~~l~ 407 (414)
|++.+.| +.+||+||+|+|+++|+
T Consensus 384 l~g~~g~------~~~~T~e~~daV~~~l~ 407 (409)
T 2e0c_A 384 IARFMGV------KALGTKEYADELIKIMD 407 (409)
T ss_dssp HHHHHTS------CCCCHHHHHHHHHHHHT
T ss_pred ccccCCC------CCcCHHHHHHHHHHHHh
Confidence 9732212 36899999999999985
No 17
>3r8w_A 3-isopropylmalate dehydrogenase 2, chloroplastic; dimer, isocitrate and isopropylmalate dehydrogenases family, biosynthesis; 2.25A {Arabidopsis thaliana}
Probab=100.00 E-value=3.7e-106 Score=818.06 Aligned_cols=350 Identities=17% Similarity=0.176 Sum_probs=304.3
Q ss_pred eecccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 7 KVANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 7 ~m~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
+|+++|++|||||||||||+++++||.+. +++|+|+++++|+++++++|++||++++++|+++|++||||+++|.+
T Consensus 40 ~~~~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~G~~lp~~tl~~~k~~daiL~Gavg~P~~ 119 (405)
T 3r8w_A 40 KKRYTITLLPGDGIGPEVVSIAKNVLQQAGSLEGVEFNFREMPIGGAALDLVGVPLPEETISAAKESDAVLLGAIGGYKW 119 (405)
T ss_dssp -CEEEEEEEEESTTHHHHHHHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGG
T ss_pred CCCeEEEEECCCcccHHHHHHHHHHHHHHHHhcCCceEEEEEEcCHHHHHhhCCcCCHHHHHHHHHCCEEEEccccCCCc
Confidence 46789999999999999999999988653 78999999999999999999999999999999999999999999965
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCCC--CCCCEEEEeeccCCccccccccccCCCccee
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIPG--WTKPICIGRHAFGDQYRATDTVIQGPGKLKL 156 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~~--~~iDivivREnteg~Y~g~e~~~~~~g~~~~ 156 (414)
...+. .. ..+++|++|||+||||+|+||+++ ++++ |+++. .++|||||||||||+|+|+++.....
T Consensus 120 ~~~~~--~~-~p~~~ll~LRk~ldLyaNlRP~k~~~gl~~~splk~~~~~~vD~vIvREnTeG~Y~G~e~~~~~~----- 191 (405)
T 3r8w_A 120 DNNEK--HL-RPEKGLLQIRAALKVFANLRPATVLPQLVDASTLKREVAEGVDLMVVRELTGGIYFGEPRGIKTN----- 191 (405)
T ss_dssp TTSCG--GG-SHHHHHHHHHHHHTCCEEEEEEECCGGGGGGSSBCHHHHTTCEEEEEEECSCSTTTCSSCEEEEC-----
T ss_pred cCCcc--cc-CcccchHHHHHHhCCeEEEEEeeccCCccccCccccccCCCceEEEEeeCCCCeecCCccccccC-----
Confidence 32110 00 113458999999999999999986 4552 44432 37999999999999999987642100
Q ss_pred eeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHh
Q 015012 157 VFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEA 235 (414)
Q Consensus 157 ~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~ 235 (414)
+ .+ .+++++ ++|||+++|||+|+||+||++|+++||+|||+|||+. +|||+++|+||+ +
T Consensus 192 ----~-------------~~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVT~v~KaNVlk~-sglf~~~~~eva-~ 251 (405)
T 3r8w_A 192 ----E-------------NG-EEVGFNTEVYAAHEIDRIARVAFETARKRRGKLCSVDKANVLEA-SILWRKRVTALA-S 251 (405)
T ss_dssp ----S-------------SS-CEEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCHH-HHHHHHHHHHHG-G
T ss_pred ----C-------------CC-ceEEEEEEEecHHHHHHHHHHHHHHHHHcCCeEEEEECchhhcc-ccHHHHHHHHHH-h
Confidence 0 01 457788 9999999999999999999999889999999999984 599999999995 7
Q ss_pred hcCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcc
Q 015012 236 NWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTV 314 (414)
Q Consensus 236 ~yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSA 314 (414)
+|| +|+++|+|||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ ++||||+||||
T Consensus 252 eYP------dV~~~~~~VD~~amqLV~~P~~FDViVt~NlfGDILSD~aA~l~GslGl~pSanig~~~-~a~fEpvHGSA 324 (405)
T 3r8w_A 252 EYP------DVELSHMYVDNAAMQLVRDPKQFDTIVTNNIFGDILSDEASMITGSIGMLPSASLSDSG-PGLFEPIHGSA 324 (405)
T ss_dssp GST------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHSCGGGCEEEEECSSS-CCEEEESSCCC
T ss_pred HCC------CCeEEeeeHHHHHHHHHhChhhCcEEeecchhhHHHHHHHHHhcCcccccceeeecCCC-CeEEecCCCCh
Confidence 999 99999999999999999999999 99999999999999999999999999999999876 69999999999
Q ss_pred cccccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccch--hhhccCCcCCccc
Q 015012 315 TRHYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL--ALIIHGSKMTREH 391 (414)
Q Consensus 315 P~~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dl--g~~~~G~~~~~~~ 391 (414)
| ||||||+ |||+|+|||++|||+| +|+ .++|++|++||.+++++|++|+|| | |. +
T Consensus 325 P-----DIAGk~i-ANP~A~IlS~amML~~slg~-------~~~A~~Ie~AV~~~l~~G~~T~Dl~~g----G~-----~ 382 (405)
T 3r8w_A 325 P-----DIAGQDK-ANPLATILSAAMLLKYGLGE-------EKAAKRIEDAVLVALNNGFRTGDIYSA----GT-----K 382 (405)
T ss_dssp G-----GGTTTTC-CCCHHHHHHHHHHHHHTTCC-------TTHHHHHHHHHHHHHHTTEECGGGCCT----TS-----E
T ss_pred h-----hhCCCCC-CCcHHHHHHHHHHHHhhCcc-------HHHHHHHHHHHHHHHHcCCcCccccCC----CC-----c
Confidence 9 9999999 9999999999999999 885 689999999999999999999999 6 51 2
Q ss_pred ccCHHHHHHHHHHHHHHHhhcC
Q 015012 392 YLNTEEFIDAVADDLRARLSGK 413 (414)
Q Consensus 392 ~~sT~e~~daV~~~l~~~~~~~ 413 (414)
.++|+||+|+|+++|++.+.++
T Consensus 383 ~~~T~e~~~aV~~~l~~~~~~~ 404 (405)
T 3r8w_A 383 LVGCKEMGEEVLKSVDSQVPAS 404 (405)
T ss_dssp ECCHHHHHHHHHHHHC------
T ss_pred ccCHHHHHHHHHHHHHHHhccc
Confidence 3999999999999998777553
No 18
>1cnz_A IPMDH, IMDH, protein (3-isopropylmalate dehydrogenase); oxidoreductase, leucine biosynthetic pathway, NAD-dependant enzyme; 1.76A {Salmonella typhimurium} SCOP: c.77.1.1 PDB: 1cm7_A
Probab=100.00 E-value=1.3e-105 Score=807.56 Aligned_cols=342 Identities=19% Similarity=0.166 Sum_probs=304.8
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchh
Q 015012 9 ANPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEAR 84 (414)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~ 84 (414)
.++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||||+++|.+..
T Consensus 4 ~~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~p~~~~ 83 (363)
T 1cnz_A 4 NYHIAVLPGDGIGPEVMAQALKVMDAVRSRFDMRITTSHYDVGGIAIDNHGHPLPKATVEGCEQADAILFGSVGGPKWEN 83 (363)
T ss_dssp CEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCEEEEECCCTHHHHHHHSSSSCHHHHHHHHTSSEEEEEECCCGGGTT
T ss_pred ccEEEEeCCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCChHHHhhcCCcCcHHHHHHHHHCCEEEEccccCCcccc
Confidence 479999999999999999999998665 7899999999999999999999999999999999999999999997532
Q ss_pred HHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCCC---CCCCEEEEeeccCCccccccccccCCCcceee
Q 015012 85 VKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIPG---WTKPICIGRHAFGDQYRATDTVIQGPGKLKLV 157 (414)
Q Consensus 85 ~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~~---~~iDivivREnteg~Y~g~e~~~~~~g~~~~~ 157 (414)
++. + ..+++|+|++|||+||||+|+||+++ ++++ |+++. .++|||||||||||+|+|.++....
T Consensus 84 ~~~-~-~~~e~~~~l~LR~~ldlyanvRP~~~~pgl~~~splk~~~~~~~vDivivREnteg~Y~g~~~~~~~------- 154 (363)
T 1cnz_A 84 LPP-E-SQPERGALLPLRKHFKLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREG------- 154 (363)
T ss_dssp SCG-G-GSTTHHHHHHHHHHHTCCEEEEEEECCTTCGGGCSBCHHHHHHCCEEEEEEECSSGGGTCSSCEEEC-------
T ss_pred CCc-c-cCcccchHHHHHHHcCCEEEEEEEEecCCccCCCCCcccccCCCCCEEEEecccCCeecCCcCcccc-------
Confidence 211 1 12456779999999999999999987 4542 34321 3699999999999999997542100
Q ss_pred eecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhh
Q 015012 158 FVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEAN 236 (414)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~ 236 (414)
. .+ .+++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ ++|+|+++|+||+ ++
T Consensus 155 ---~-------------~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva-~e 215 (363)
T 1cnz_A 155 ---S-------------GQ-YEKAFDTEVYHRFEIERIARIAFESARKRRRKVTSIDKANVLQ-SSILWREIVNDVA-KT 215 (363)
T ss_dssp ---C-------------GG-GCEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TT
T ss_pred ---C-------------CC-CceEEEEEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHHH-HH
Confidence 0 01 457777 999999999999999999999988899999999999 9999999999997 79
Q ss_pred cCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCccc
Q 015012 237 WKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVT 315 (414)
Q Consensus 237 yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP 315 (414)
|| +|+++|++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++ .+||||+|||||
T Consensus 216 yp------dI~~~~~~vD~~~m~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~~-~a~fEpvHGSAP 288 (363)
T 1cnz_A 216 YP------DVELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG-FGLYEPAGGSAP 288 (363)
T ss_dssp CT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECTTS-CEEEEESSCCCG
T ss_pred CC------CceEeeeeHHHHHHHHhhCcccceEEEECCcchHHHHHHHHHhcCCCcccccceeCCCC-CeEEEcCCCChh
Confidence 99 99999999999999999999999 99999999999999999999999999999999886 599999999999
Q ss_pred ccccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccch-hhhccCCcCCccccc
Q 015012 316 RHYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDL-ALIIHGSKMTREHYL 393 (414)
Q Consensus 316 ~~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dl-g~~~~G~~~~~~~~~ 393 (414)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+|| | |. +.+
T Consensus 289 -----diAGk~i-ANP~A~IlS~ammL~~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dl~g----G~-----~~~ 346 (363)
T 1cnz_A 289 -----DIAGKNI-ANPIAQILSLALLLRYSLDA-------NDAATAIEQAINRALEEGVRTGDLAR----GA-----AAV 346 (363)
T ss_dssp -----GGTTTTC-SCCHHHHHHHHHHHHHHSSC-------HHHHHHHHHHHHHHHHTTCCCGGGTT----TT-----TCC
T ss_pred -----hhcCCCc-cCcHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHhcCCcCcccCC----CC-----CCC
Confidence 9999999 9999999999999999 885 799999999999999999999999 5 51 138
Q ss_pred CHHHHHHHHHHHHH
Q 015012 394 NTEEFIDAVADDLR 407 (414)
Q Consensus 394 sT~e~~daV~~~l~ 407 (414)
||+||+|+|+++|+
T Consensus 347 ~T~e~~daV~~~l~ 360 (363)
T 1cnz_A 347 STDEMGDIIARYVA 360 (363)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999995
No 19
>1tyo_A Isocitrate dehydrogenase; enzyme-ethenonadp complex, oxidoreductase; HET: ENP; 2.15A {Aeropyrum pernix} PDB: 1v94_A 1xgv_A 1xkd_A*
Probab=100.00 E-value=3.6e-105 Score=819.30 Aligned_cols=359 Identities=20% Similarity=0.172 Sum_probs=311.1
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||||++||..
T Consensus 36 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~lp~etl~~~k~~da~LkGav~tP~~ 115 (435)
T 1tyo_A 36 PVVAFIRGDGVGPEVVESALKVVDAAVKKVYGGSRRIVWWELLAGHLAREKCGELLPKATLEGIRLARVALKGPLETPVG 115 (435)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCSHHHHHHHSSSSCHHHHHHHHHHSEEEECCCCCCTT
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHHhhcCCCcceEEEEEechHHHHHhhCCcCCHHHHHHHHhCCeEEECCccCCCc
Confidence 77999999999999999999988644 38999999999999999999999999999999999999999999964
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCccee--eee
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKL--VFV 159 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~--~~~ 159 (414)
. +|+|+|++|||.||||+|+||+++.++| |+++++++|||||||||||+|+|+++... ++..+. .|.
T Consensus 116 ~---------~~~s~~l~LRk~LdlyanlRPv~~~gv~splk~~~~vDivIvREnTeg~Y~G~e~~~~-~~~~~~v~~~~ 185 (435)
T 1tyo_A 116 T---------GYRSLNVAIRQALDLYANIRPVRYYGQPAPHKYADRVDMVIFRENTEDVYAGIEWPHD-SPEAARIRRFL 185 (435)
T ss_dssp S---------CTTHHHHHHHHHHTCCEEEEEEECCSCCCSBTTGGGCEEEEEEECSSSGGGCCEECTT-SHHHHHHHHHH
T ss_pred c---------cccChhHHHHHHcCCEEEeEEEEecCCCCCCCCcCCCcEEEEecCCCCeecccccccC-Cccccceeccc
Confidence 2 6889999999999999999999976666 55444579999999999999999987421 110000 000
Q ss_pred cCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCcccccchHHHHHHHHHHHhhc
Q 015012 160 PEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANW 237 (414)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~y 237 (414)
.+ + .... .+ ++++++ ++|||++++||+|+||+||++| +++||+|||+|||+.|+|+|+++|+|||+++|
T Consensus 186 ~~------~-~~~~-~~-~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf~~~~~eva~~ey 256 (435)
T 1tyo_A 186 AE------E-FGIS-IR-EDAGIGVKPISRFATRRLMERALEWALRNGNTVVTIMHKGNIMKYTEGAFMRWAYEVALEKF 256 (435)
T ss_dssp HH------H-HCCC-CC-TTEEEEEEEEEHHHHHHHHHHHHHHHHHHTCCEEEEEECTTTSTTTHHHHHHHHHHHHHHHS
T ss_pred hh------h-cccc-CC-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCccchhhhHHHHHHHHHHHHHhC
Confidence 00 0 0000 01 468888 9999999999999999999998 55799999999999999999999999975599
Q ss_pred CCc-c-------------ccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCC
Q 015012 238 KSK-F-------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDG 302 (414)
Q Consensus 238 p~~-~-------------~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~ 302 (414)
||+ | +..+|+++|+|||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+|++
T Consensus 257 pd~~~~e~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~GslGlapSanig~~- 335 (435)
T 1tyo_A 257 REHVVTEQEVQEKYGGVRPEGKILVNDRIADNMLQQIITRPWDYQVIVAPNLNGDYISDAASALVGGIGMAAGMNMGDG- 335 (435)
T ss_dssp GGGEEEHHHHHHHSTTCCCTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECSS-
T ss_pred CCcccccccccccccccccCCeEEEEeeeHHHHHHHHhhCCCCceEEEEcccchHHHHHHHHhhcCCcccCceeeECCC-
Confidence 961 2 23449999999999999999999999 9999999999999999999999999999999987
Q ss_pred ceEEEccccCcccccccccccCCCCccChhHHHHHHHHHH-HHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhh
Q 015012 303 KTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGL-AHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALI 381 (414)
Q Consensus 303 ~~a~FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL-~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~ 381 (414)
.+||||+||||| ||||||+ |||+|+|||++||| +|||+ .++|++|++||.+|+++|++|+|||+.
T Consensus 336 -~a~fEpvHGSAP-----diAGk~i-ANP~A~IlS~amML~~hlg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlgg~ 401 (435)
T 1tyo_A 336 -IAVAEPVHGTAP-----KYAGKDL-INPSAEILSASLLIGEFMGW-------REVKSIVEYAIRKAVQSKKVTQDLARH 401 (435)
T ss_dssp -CEEEEESSCCCG-----GGTTSSC-SCCHHHHHHHHHHHHTTSCC-------HHHHHHHHHHHHHHHHTTCCBHHHHTT
T ss_pred -ceeeecCCCChH-----HhcCCCC-cCcHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCcCcccccc
Confidence 589999999999 9999999 99999999999999 99885 799999999999999999999999843
Q ss_pred ccCCcCCcccccCHHHHHHHHHHHHH
Q 015012 382 IHGSKMTREHYLNTEEFIDAVADDLR 407 (414)
Q Consensus 382 ~~G~~~~~~~~~sT~e~~daV~~~l~ 407 (414)
++|. +.+||+||+|+|+++|+
T Consensus 402 ~~g~-----~~~~T~e~~daV~~~l~ 422 (435)
T 1tyo_A 402 MPGV-----QPLRTSEYTETLIAYID 422 (435)
T ss_dssp STTC-----CCBCHHHHHHHHHHHHH
T ss_pred CCCC-----CCcCHHHHHHHHHHHHh
Confidence 3331 35899999999999994
No 20
>1wpw_A 3-isopropylmalate dehydrogenase; oxidoreductase; 2.80A {Sulfolobus tokodaii} SCOP: c.77.1.1
Probab=100.00 E-value=7.4e-105 Score=794.24 Aligned_cols=326 Identities=20% Similarity=0.229 Sum_probs=303.6
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhH
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~ 85 (414)
++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||||++||.+.
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~tP~~~-- 79 (336)
T 1wpw_A 2 FTVALIQGDGIGPEIVSKSKRILAKINELYSLPIEYIEVEAGDRALARYGEALPKDSLKIIDKADIILKGPVGESAAD-- 79 (336)
T ss_dssp EEEEEECCSTTHHHHHHHHHHHHHHHHHHTTCCEEEEEECCSHHHHHHSSSSSCHHHHHHHHTCSEEEECCCCTTHHH--
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhhCCCeEEEEEecchHHHHhhCCcCCHHHHHHHHHCCEEEECCcCCCCcc--
Confidence 68999999999999999999998765 899999999999999999999999999999999999999999999531
Q ss_pred HHHHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCC-CCCEEEEeeccCCccccccccccCCCcceeeeecCCCC
Q 015012 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGW-TKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKD 164 (414)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~-~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g~ 164 (414)
+|++|||+||||+|+||+++ +|++.+++ ++|+|||||||||+|+|.++..
T Consensus 80 -----------~~l~lR~~ldlyan~RP~~~--~pg~~~~~~~~D~vivREnteg~Y~g~~~~~---------------- 130 (336)
T 1wpw_A 80 -----------VVVKLRQIYDMYANIRPAKS--IPGIDTKYGNVDILIVRENTEDLYKGFEHIV---------------- 130 (336)
T ss_dssp -----------HHHHHHHTTTCCEEEEEEEC--CTTTCCSCSCCEEEEEEECSSBTTTCCEEEE----------------
T ss_pred -----------hHHHHHHHhCCEEEEEEEec--cCCCCCCCCCCcEEEEecCccCeEcCCcccc----------------
Confidence 58999999999999999874 45555555 6999999999999999976531
Q ss_pred ccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCcccc
Q 015012 165 EKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEA 243 (414)
Q Consensus 165 ~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~ 243 (414)
+ ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+.|||+|+++|+||+ ++
T Consensus 131 -----------~-~~va~~~~~~T~~~~eRiar~AF~~A~~rrkkvt~v~KaNvlk~t~glf~~~~~eva-~~------- 190 (336)
T 1wpw_A 131 -----------S-DGVAVGMKIITRFASERIAKVGLNFALRRRKKVTCVHKANVMRITDGLFAEACRSVL-KG------- 190 (336)
T ss_dssp -----------E-TTEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCTTHHHHHHHHHHHHH-TT-------
T ss_pred -----------C-CCeEEEEEEecHHHHHHHHHHHHHHHHHhCCeEEEEECCcchhhhhHHHHHHHHHHH-Hh-------
Confidence 1 467888 99999999999999999999998889999999999999999999999997 43
Q ss_pred CCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccc
Q 015012 244 AGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQ 322 (414)
Q Consensus 244 ~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dI 322 (414)
+|+++|++||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+||||| ||
T Consensus 191 -~I~~~~~~vD~~~~~lv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~--~a~fEp~HGSAp-----di 262 (336)
T 1wpw_A 191 -KVEYSEMYVDAAAANLVRNPQMFDVIVTENVYGDILSDEASQIAGSLGIAPSANIGDK--KALFEPVHGAAF-----DI 262 (336)
T ss_dssp -TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEECSS--CEEEEESSCCCT-----TT
T ss_pred -CceeEEEeHHHHHHHHhhCcccceEEEEcCcchHHHHHHHHHhcCCccccceEEECCC--CceEeCCCCCch-----hh
Confidence 69999999999999999999999 9999999999999999999999999999999987 489999999999 99
Q ss_pred cCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC-CCccchhhhccCCcCCcccccCHHHHHHH
Q 015012 323 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDA 401 (414)
Q Consensus 323 aGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 401 (414)
||||+ |||+|+|||++|||+|||++++|+++.++|++|++||.+++++| ++|+||| | .+||+||+|+
T Consensus 263 aGk~i-ANP~A~IlS~ammL~~lg~~d~~~~~~~~A~~Ie~Av~~~l~~g~~~T~Dlg----G-------~~~T~e~~da 330 (336)
T 1wpw_A 263 AGKNI-GNPTAFLLSVSMMYERMYELSNDDRYIKASRALENAIYLVYKERKALTPDVG----G-------NATTDDLINE 330 (336)
T ss_dssp TTSSC-CCTHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHHHHHHHCSSCCGGGT----C-------CCCHHHHHHH
T ss_pred CCCCC-cCcHHHHHHHHHHHHHcCccccccchHHHHHHHHHHHHHHHHcCCccCCccC----C-------CCCHHHHHHH
Confidence 99999 99999999999999999999999999999999999999999999 8999998 7 6899999999
Q ss_pred HHHHH
Q 015012 402 VADDL 406 (414)
Q Consensus 402 V~~~l 406 (414)
|+++|
T Consensus 331 v~~~l 335 (336)
T 1wpw_A 331 IYNKL 335 (336)
T ss_dssp HHHSC
T ss_pred HHHhh
Confidence 99875
No 21
>1vlc_A 3-isopropylmalate dehydrogenase; TM0556, structural genomics PSI, protein structure initiative, joint center for structu genomics; 1.90A {Thermotoga maritima} SCOP: c.77.1.1
Probab=100.00 E-value=3.5e-105 Score=803.27 Aligned_cols=337 Identities=18% Similarity=0.159 Sum_probs=301.4
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhH
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~ 85 (414)
.+|++|||||||||||+++++||.+. +++|+|+++++|+++++++|+++|++++++|+++|++||||+++|.+..+
T Consensus 13 ~~I~vipGDGIGpEV~~~a~~Vl~a~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~L~Gavg~P~~~~~ 92 (366)
T 1vlc_A 13 MKIAVLPGDGIGPEVVREALKVLEVVEKKTGKTFEKVFGHIGGDAIDRFGEPLPEETKKICLEADAIFLGSVGGPKWDDL 92 (366)
T ss_dssp EEEEEEEESTHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCTHHHHHHHSSSSCHHHHHHHHHSSEEEEEECCCGGGTTS
T ss_pred eEEEEeCCCCccHHHHHHHHHHHHHHHHhcCCCeEEEEEeCCHHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCccccC
Confidence 58999999999999999999998766 89999999999999999999999999999999999999999999964311
Q ss_pred HHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCCC---CCCCEEEEeeccCCccccccccccCCCcceeee
Q 015012 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIPG---WTKPICIGRHAFGDQYRATDTVIQGPGKLKLVF 158 (414)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~~---~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~ 158 (414)
+. ++ ++.+++|++|||+||||+|+||+++ ++++ |++++ .++|||||||||||+|+|.++..
T Consensus 93 ~~-~~-r~~~~~~l~LRk~ldlyaN~RP~~~~pgl~~~splk~~~~~~~vDivIvREnteG~Y~g~~~~~---------- 160 (366)
T 1vlc_A 93 PP-EK-RPEIGGLLALRKMLNLYANIRPIKVYRSLVHVSPLKEKVIGSGVDLVTVRELSYGVYYGQPRGL---------- 160 (366)
T ss_dssp CS-TT-SHHHHTHHHHHHHTTCCEEEEEEECCGGGGGGSSSCHHHHTTCCEEEEEEECSSGGGTEEEEEE----------
T ss_pred Cc-cc-CcccchhHHHHHHhCCEEEEEEccccCCCCCcCCCcccccCCCceEEEEEeCCCCeecCCcccc----------
Confidence 10 00 0112358999999999999999986 4554 44321 36999999999999999987631
Q ss_pred ecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhc
Q 015012 159 VPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANW 237 (414)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~y 237 (414)
+ ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+ |||+|+++|+||+ ++|
T Consensus 161 -----------------~-~~~a~~~~~~Tr~~~eRIar~AFe~A~~rrkkVt~v~KaNvlk-t~glf~~~~~eva-~ey 220 (366)
T 1vlc_A 161 -----------------D-EEKGFDTMIYDRKTVERIARTAFEIAKNRRKKVTSVDKANVLY-SSMLWRKVVNEVA-REY 220 (366)
T ss_dssp -----------------C-SSCEEEECCCCHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHH-TTC
T ss_pred -----------------C-CCeEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCcccc-cchHHHHHHHHHH-HHC
Confidence 1 356777 999999999999999999999988899999999999 9999999999997 699
Q ss_pred CCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccc
Q 015012 238 KSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTR 316 (414)
Q Consensus 238 p~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~ 316 (414)
| +|++++++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+| + .+||||+|||||
T Consensus 221 p------dV~~~~~~VD~~~mqlv~~P~~FDVivt~NlfGDILSD~aa~l~GslGl~pSanig-~--~alfEpvHGSAP- 290 (366)
T 1vlc_A 221 P------DVELTHIYVDNAAMQLILKPSQFDVILTTNMFGDILSDESAALPGSLGLLPSASFG-D--KNLYEPAGGSAP- 290 (366)
T ss_dssp T------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHTTSSSCGGGCEEEEES-S--SEEEEESSCCCT-
T ss_pred C------CceEEeeeHHHHHHHHhhCcccceEEEEcchhHHHHHHHHHHhcCccccccEeeeC-C--ceeeecCCCchh-
Confidence 9 99999999999999999999999 99999999999999999999999999999999 5 599999999999
Q ss_pred cccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccc-cC
Q 015012 317 HYRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHY-LN 394 (414)
Q Consensus 317 ~~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~-~s 394 (414)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+|||. +|+ . +|
T Consensus 291 ----dIAGk~i-ANP~A~IlS~ammL~~slg~-------~~~A~~Ie~Av~~~l~~g~~T~Dlg~--~gg------~~~~ 350 (366)
T 1vlc_A 291 ----DIAGKNI-ANPIAQILSLAMMLEHSFGM-------VEEARKIERAVELVIEEGYRTRDIAE--DPE------KAVS 350 (366)
T ss_dssp ----TTTTTTC-SCCHHHHHHHHHHHHHHHCC-------HHHHHHHHHHHHHHHHTTCCCGGGCS--SGG------GCCC
T ss_pred ----hcCCCCc-cCcHHHHHHHHHHHHHHcCC-------hhHHHHHHHHHHHHHHcCCccccccc--CCC------CCcC
Confidence 9999999 9999999999999999 985 79999999999999999999999962 121 4 89
Q ss_pred HHHHHHHHHHHHHH
Q 015012 395 TEEFIDAVADDLRA 408 (414)
Q Consensus 395 T~e~~daV~~~l~~ 408 (414)
|+||+|+|+++|+.
T Consensus 351 T~e~~daV~~~l~~ 364 (366)
T 1vlc_A 351 TSQMGDLICKKLEE 364 (366)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999964
No 22
>2d4v_A Isocitrate dehydrogenase; alpha and beta protein, isocitrate/isopropylmalate dehydrogenase-like fold, oxidoreductase; HET: FLC NAD; 1.90A {Acidithiobacillus thiooxidans}
Probab=100.00 E-value=8.6e-105 Score=815.33 Aligned_cols=362 Identities=21% Similarity=0.211 Sum_probs=310.2
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCC--CCCHHHHHHHHcCCeeeecccCCC
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDD--KVTVESAEATLKYNVAIKCATITP 80 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~G~~~~~~~g~--~lp~~~~dai~~~~v~lkg~~~tp 80 (414)
++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+ ++|++++++|++++++||||++||
T Consensus 27 ~~I~vipGDGIGpEV~~aa~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~G~~~~lp~etl~~~k~~da~lkGav~tP 106 (429)
T 2d4v_A 27 PIIPFIEGDGIGCDVTPAMRSVVDAAVAKVYGGQRQIAWMELFAGQKAVQLYGEGQYLPDETMAAIREYKVAIKGPLETP 106 (429)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEEECCTHHHHHHHCTTCSSCHHHHHHHHHHCEEEECCCCCC
T ss_pred cEEEEECCCCCCHHHHHHHHHHHHHHHHhhcCCCCceEEEEEeeehhhhhccCCCCCCcHHHHHHHHHCCEEEECCccCC
Confidence 67999999999999999999988543 389999999999999999999 999999999999999999999999
Q ss_pred CchhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCccee-e
Q 015012 81 DEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKL-V 157 (414)
Q Consensus 81 ~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~-~ 157 (414)
... +|+|+|++|||.||||+|+||+++ +++| |+++..++|||||||||||+|+|+++....++..++ .
T Consensus 107 ~~~---------~~~s~~l~LRk~LdLyanvRPv~~~~gv~splk~~~~vDivIvREnTeg~Y~G~e~~~~~~~~~~v~~ 177 (429)
T 2d4v_A 107 VGG---------GIRSLNVAMRQDLDLYVCLRPVRYFEGTPSPMRHPEKVDMVIFRENSEDIYAGIEWPAGSPEAEKIIR 177 (429)
T ss_dssp SSS---------SSCCHHHHHHHHTTCCEEEEEEECCTTCCCSBSCGGGCEEEEEEECSCGGGGCCEECTTCHHHHHHHH
T ss_pred Ccc---------cccChhHHHHHHcCCEEEEEEEEecCCCCCCCCCcCCCCEEEEEeCCCCeecCcccccCCccccccee
Confidence 642 689999999999999999999986 6776 444323799999999999999999875322211111 1
Q ss_pred eecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCC-CEEEEeCCCcccccchHHHHHHHHHHHh
Q 015012 158 FVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKW-PLYLSTKNTILKKYDGRFKDIFQEVYEA 235 (414)
Q Consensus 158 ~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~-~Vt~v~KaNvl~~tdglf~~~~~eva~~ 235 (414)
|.++.. +++..++. ++++++ ++|||+++|||+|+||+||++|++ +||+|||+|||+.|+|+|+++|+||+++
T Consensus 178 ~~~~~~----~~~~~~~~--~~~a~~~~~~T~~~~eRIar~AFe~A~~r~rkkVT~v~KaNVlk~tdGlf~~~~~eva~~ 251 (429)
T 2d4v_A 178 FLREEM----GVTKIRFP--DSSAIGIKPVSTEGSERLIRRTIQYALEHGKPSVSLVHKGNIMKFTEGGFRDWGYALAER 251 (429)
T ss_dssp HHHHTS----CCCCCSCG--GGEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEECTTTSTTTHHHHHHHHHHHHHH
T ss_pred cccccc----ccccccCC--CceEEEEEEecHHHHHHHHHHHHHHHHhcCCCeEEEEECCccchhhhHHHHHHHHHHHHH
Confidence 111000 00111111 467888 999999999999999999999955 6999999999999999999999999755
Q ss_pred hcCCccc--------------------------cCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcC
Q 015012 236 NWKSKFE--------------------------AAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFG 288 (414)
Q Consensus 236 ~yp~~~~--------------------------~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~G 288 (414)
+|||++. ..+|+++|+|||+|+||||++|++| ||||+|||||||||++|+++|
T Consensus 252 eypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~fDVivt~NlfGDILSD~aA~l~G 331 (429)
T 2d4v_A 252 EFAGRVFTWRQKAAISKAEGKAAGQKAEQQAIADGKLIIKDVIADNFLQQILLRPEDYSVVATLNLNGDYVSDALAAEVG 331 (429)
T ss_dssp HSTTTEEEHHHHHHHHHHHCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCCEEEECHHHHHHHHHHHHHHTT
T ss_pred hCCCccccccccccccccccccccchhccccccCCeeEEEEeeHHHHHHHHhhCcccCcEEEECCcccHHHHHHHHHhcC
Confidence 9996431 2249999999999999999999999 999999999999999999999
Q ss_pred CccccccceecCCCceEEEccccCcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHH
Q 015012 289 SLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGT 368 (414)
Q Consensus 289 glGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~ 368 (414)
||||+||+|+|+. ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.++
T Consensus 332 slGl~pSanig~~--~a~fEpvHGSAP-----diAGk~i-ANP~A~IlS~amML~hlg~-------~~~A~~Ie~Av~~~ 396 (429)
T 2d4v_A 332 GIGMAPGANLSDT--HAIFEATHGTAP-----DIAGQGK-ANPSSLILSAVMMLEHLGW-------GEAAQAIVAAMNAT 396 (429)
T ss_dssp CGGGCCCEEECSS--CEEEECSCCCCT-----TTTTTTC-CCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHH
T ss_pred CHhhcCeeEECCC--ceEEecCCCChh-----HhcCCCC-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHH
Confidence 9999999999976 599999999999 9999999 9999999999999999986 79999999999999
Q ss_pred HhcCCCccchhhhccCCcCCcccccCHHHHHHHHHHHH
Q 015012 369 VESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 406 (414)
Q Consensus 369 l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 406 (414)
+++|++|+|||+.++|. +.++|+||+|+|+++|
T Consensus 397 l~~g~~T~Dlg~~~~g~-----~~~~T~e~~daV~~~l 429 (429)
T 2d4v_A 397 IAAGEVTGDLAALRGDV-----PALSTTEFTAALIRRF 429 (429)
T ss_dssp HHTTCEEHHHHTTCTTC-----CEECHHHHHHHHHTTC
T ss_pred HHcCCccccccccCCCC-----CCcCHHHHHHHHHhhC
Confidence 99999999998433331 2489999999999764
No 23
>1hqs_A Isocitrate dehydrogenase; glyoxylate bypass, bsidh, tricarboxylic acid cycle, oxidoreductase, protein phosphorylation, NADP; HET: CME CIT; 1.55A {Bacillus subtilis} SCOP: c.77.1.1
Probab=100.00 E-value=7.1e-105 Score=815.37 Aligned_cols=362 Identities=21% Similarity=0.249 Sum_probs=309.4
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC-------CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCc
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP-------FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDE 82 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~-------~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~ 82 (414)
++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|++++++||||++||..
T Consensus 20 ~~I~vipGDGIGpEI~~~a~~Vl~a~~~~~~~~~~~i~~~~~~~G~~~~~~~g~~lp~etl~~~k~~da~lkGav~tP~~ 99 (423)
T 1hqs_A 20 PIIPFIEGDGTGPDIWNAASKVLEAAVEKAYKGEKKITWKEVYAGEKAYNKTGEWLPAETLDVIREYFIAIKGPLTTPVG 99 (423)
T ss_dssp BEEEEECCSTTHHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCCTHHHHHHHSCSSCHHHHHHHHHHCEEEECCCCCCSS
T ss_pred CEEEEECCCCcCHHHHHHHHHHHHHHHhhhcCCCCceEEEEEecCHHHHHhhCCcCcHHHHHHHHHCCEEEECCccCCCC
Confidence 67999999999999999999987543 38999999999999999999999999999999999999999999964
Q ss_pred hhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCccee--ee
Q 015012 83 ARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKL--VF 158 (414)
Q Consensus 83 ~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~--~~ 158 (414)
. +|+|+|++|||.||||+|+||+++ +++| |++.++++|||||||||||+|+|+++.. +++..+. .|
T Consensus 100 ~---------~~~s~nl~LRk~LdlyanvRPv~~~pg~~splk~~~~vDivIvREnteg~Y~G~e~~~-g~~~~~~v~~~ 169 (423)
T 1hqs_A 100 G---------GIRSLNVALRQELDLFVCLRPVRYFTGVPSPVKRPEDTDMVIFRENTEDIYAGIEYAK-GSEEVQKLISF 169 (423)
T ss_dssp S---------SSCCHHHHHHHHTTCCEEEEEEECCTTCCCSBSCGGGCEEEEEEECSCGGGGCCEECT-TCHHHHHHHHH
T ss_pred c---------CcCChhHHHHHHcCCEEEEEEEeccCCCCCCCCCCCCCcEEEEecCCCCeeccccccc-CCccccceecc
Confidence 2 689999999999999999999986 5665 4443347999999999999999998752 1111100 00
Q ss_pred ecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCcccccchHHHHHHHHHHHhh
Q 015012 159 VPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEAN 236 (414)
Q Consensus 159 ~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~ 236 (414)
..+ ...++..++. ++++++ ++|||+++|||+|+||+||++| +++||+|||+|||+.|+|+|++||+||++++
T Consensus 170 ~~~----~~~~~~~~~~--~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNVlk~t~Glf~~~~~eva~~e 243 (423)
T 1hqs_A 170 LQN----ELNVNKIRFP--ETSGIGIKPVSEEGTSRLVRAAIDYAIEHGRKSVTLVHKGNIMKFTEGAFKNWGYELAEKE 243 (423)
T ss_dssp HHH----HSCCCCCSCG--GGEEEEEEEEEHHHHHHHHHHHHHHHHHHTCSEEEEEECTTTSTTTHHHHHHHHHHHHHHH
T ss_pred ccc----cccccccccC--CceEEEEEEEcHHHHHHHHHHHHHHHHHcCCCcEEEEECCccchhhhHHHHHHHHHHHHHh
Confidence 000 0000111111 468888 9999999999999999999998 5579999999999999999999999997559
Q ss_pred cCCcc--------------------------ccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCC
Q 015012 237 WKSKF--------------------------EAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGS 289 (414)
Q Consensus 237 yp~~~--------------------------~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~Gg 289 (414)
|||+. +.++|+++|+|||+|+||||++|++| ||||+|||||||||++|+++||
T Consensus 244 ypd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDILSD~aA~l~Gs 323 (423)
T 1hqs_A 244 YGDKVFTWAQYDRIAEEQGKDAANKAQSEAEAAGKIIIKDSIADIFLQQILTRPNEFDVVATMNLNGDYISDALAAQVGG 323 (423)
T ss_dssp HGGGEEEHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTC
T ss_pred CCCcccchhhhccccccccccccccccccccccCeEEEEEeeHHHHHHHHhhCCCCccEEEECCcchHHHHHHHHhhcCC
Confidence 99521 23449999999999999999999999 9999999999999999999999
Q ss_pred ccccccceecC-CCceEEEccccCcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHH
Q 015012 290 LGLMTSVLVCP-DGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGT 368 (414)
Q Consensus 290 lGlapSanig~-~~~~a~FEp~HGSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~ 368 (414)
|||+||+|+|+ ++ ++||||+||||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+|
T Consensus 324 lGl~pSanigp~~~-~alfEp~HGSAP-----diAGk~i-ANP~A~IlS~amML~hlg~-------~~~A~~Ie~Av~~~ 389 (423)
T 1hqs_A 324 IGIAPGANINYETG-HAIFEATHGTAP-----KYAGLDK-VNPSSVILSGVLLLEHLGW-------NEAADLVIKSMEKT 389 (423)
T ss_dssp TTTCEEEEECTTTC-CEEEEESCCCCG-----GGTTTTC-SCCHHHHHHHHHHHHHHTC-------HHHHHHHHHHHHHH
T ss_pred cccCccceecCCCC-ceEEecCCCChh-----hhCCCCC-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHH
Confidence 99999999994 33 699999999999 9999999 9999999999999999996 79999999999999
Q ss_pred HhcCCCccchhhhccCCcCCcccccCHHHHHHHHHHHH
Q 015012 369 VESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDL 406 (414)
Q Consensus 369 l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~~l 406 (414)
+++|++|+||++.++|. +.++|+||+|+|+++|
T Consensus 390 l~~g~~T~Dl~g~~~g~-----~~~~T~e~~daV~~~l 422 (423)
T 1hqs_A 390 IASKVVTYDFARLMDGA-----TEVKCSEFGEELIKNM 422 (423)
T ss_dssp HHTTEECHHHHTTSSSC-----EECCHHHHHHHHHHTC
T ss_pred HHcCCcccccccccCCC-----CCcCHHHHHHHHHHhh
Confidence 99999999998432231 2589999999999876
No 24
>2d1c_A Isocitrate dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: NAP CIT; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=1.9e-104 Score=819.07 Aligned_cols=341 Identities=21% Similarity=0.227 Sum_probs=313.3
Q ss_pred Cccceeec----ccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcC-CCCCHHHHHHHHcCCeeeecc
Q 015012 2 AFQKIKVA----NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATD-DKVTVESAEATLKYNVAIKCA 76 (414)
Q Consensus 2 ~~~~~~m~----~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g-~~lp~~~~dai~~~~v~lkg~ 76 (414)
..+||+|. ++|++|||||||||||++++++|.+.+++|+|+++++|++++++|| +++|++++++|+++|++||||
T Consensus 8 ~~~~i~~~~~g~~~IavipGDGIGpEV~~~a~~VL~a~~~~ie~~~~~~G~~~~~~~G~~~lp~etle~ik~~daiLkGa 87 (496)
T 2d1c_A 8 TGKKMHVLEDGRKLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGP 87 (496)
T ss_dssp TSCEEEECTTSCEEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEEECCCSHHHHTTTCTTSCCHHHHHHHHHHCEEEECC
T ss_pred CCceeEeccCCCEEEEEEcCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHhccCCCcCcHHHHHHHHHCCEEEECC
Confidence 35789997 8999999999999999999999998899999999999999999999 999999999999999999999
Q ss_pred cCCCCchhHHHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCcc
Q 015012 77 TITPDEARVKEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKL 154 (414)
Q Consensus 77 ~~tp~~~~~~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~ 154 (414)
++||... +|+|+|++|||.||||+|+||++. ++++ |+++ .++|+|||||||||+|+|.++..
T Consensus 88 vgtP~~~---------~~~s~~l~LRk~LdLyaNlRP~k~~pgl~splk~-~~vD~vIVREnTEG~Y~G~e~~~------ 151 (496)
T 2d1c_A 88 LETPVGY---------GEKSANVTLRKLFETYANVRPVREFPNVPTPYAG-RGIDLVVVRENVEDLYAGIEHMQ------ 151 (496)
T ss_dssp CCCCSSS---------SSCCHHHHHHHHTTCCEEEEEEECBTTBCCTTTT-SCCEEEEEEECSSBGGGCCEEEE------
T ss_pred ccCCCcc---------cccChHHHHHHHhCCEEEEEEEeecCCCCccccC-CCccEEEEeeCcCceEeceeEec------
Confidence 9999742 689999999999999999999875 3443 3321 37999999999999999986531
Q ss_pred eeeeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCcccccchHHHHHHHHH
Q 015012 155 KLVFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEV 232 (414)
Q Consensus 155 ~~~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~ev 232 (414)
+ ++++++ ++|||+++|||+|+||+||++| +++||+|||+|||+.|+|+|+++|+||
T Consensus 152 ---------------------~-~~va~~~~v~Tr~~ieRIar~AFe~A~~r~rkkVT~V~KaNVlk~sdGlfr~v~~eV 209 (496)
T 2d1c_A 152 ---------------------T-PSVAQTLKLISWKGSEKIVRFAFELARAEGRKKVHCATKSNIMKLAEGTLKRAFEQV 209 (496)
T ss_dssp ---------------------E-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTCTTHHHHHHHHHHHH
T ss_pred ---------------------C-CCeEEEEEEecHHHHHHHHHHHHHHHHhcCCCcEEEEECCCchhhHHHHHHHHHHHH
Confidence 1 468888 9999999999999999999999 568999999999999999999999999
Q ss_pred HHhhcCCccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEcccc
Q 015012 233 YEANWKSKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAH 311 (414)
Q Consensus 233 a~~~yp~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~H 311 (414)
+ ++|| +|+++|++||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+|
T Consensus 210 a-~eYP------dI~~e~~~VD~~amqLV~~P~~FDVIVt~NLfGDILSDlaA~l~GslGlapSanig~~--~a~FEpvH 280 (496)
T 2d1c_A 210 A-QEYP------DIEAVHIIVDNAAHQLVKRPEQFEVIVTTNMNGDILSDLTSGLIGGLGFAPSANIGNE--VAIFEAVH 280 (496)
T ss_dssp H-TTCT------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHTTTTCGGGCEEEEECSS--CEEEEESS
T ss_pred H-HHCC------CceEEEEeHHHHHHHHhhCcCcceEEEECCcchHHHHHHHHHhcCCcccCcEEEECCC--CceeeCCC
Confidence 5 7999 99999999999999999999999 9999999999999999999999999999999987 48999999
Q ss_pred CcccccccccccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC-CCccchhhhccCCcCCcc
Q 015012 312 GTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTRE 390 (414)
Q Consensus 312 GSAP~~~~~dIaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~ 390 (414)
|||| ||||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| |. .
T Consensus 281 GSAP-----DIAGk~i-ANP~A~IlSaamML~hlG~-------~~~A~~Ie~AV~~vl~~G~~~T~DLg----g~----~ 339 (496)
T 2d1c_A 281 GSAP-----KYAGKNV-INPTAVLLSAVMMLRYLEE-------FATADLIENALLYTLEEGRVLTGDVV----GY----D 339 (496)
T ss_dssp CCCT-----TTTTSSC-CCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHTSSCBHHHH----CT----T
T ss_pred Cchh-----hhcCCCc-cCcHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcCCeeccccC----CC----C
Confidence 9999 9999999 9999999999999999986 799999999999999999 9999998 51 0
Q ss_pred cccCHHHHHHHHHHHHHHHh
Q 015012 391 HYLNTEEFIDAVADDLRARL 410 (414)
Q Consensus 391 ~~~sT~e~~daV~~~l~~~~ 410 (414)
+.+||+||+|+|+++|++.+
T Consensus 340 ~~~sT~e~~daV~~~L~~~~ 359 (496)
T 2d1c_A 340 RGAKTTEYTEAIIQNLGKTP 359 (496)
T ss_dssp TCBCHHHHHHHHHHTTTCCC
T ss_pred CCcCHHHHHHHHHHHHhhhh
Confidence 25899999999999996544
No 25
>3blx_B Isocitrate dehydrogenase [NAD] subunit 2; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_B* 3blv_B
Probab=100.00 E-value=3.2e-105 Score=801.13 Aligned_cols=325 Identities=22% Similarity=0.262 Sum_probs=301.3
Q ss_pred cccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhHHHH
Q 015012 9 ANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEF 88 (414)
Q Consensus 9 ~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~~e~ 88 (414)
.++|++|||||||||||+++++||.+.+++|+|+++++|+++ +++|+++|++++++|+++|++||||+++|.+.
T Consensus 21 ~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~~~-~~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~----- 94 (354)
T 3blx_B 21 KYTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIF-VNGLTTIPDPAVQSITKNLVALKGPLATPIGK----- 94 (354)
T ss_dssp CEECBCCCCSTTHHHHHHHHHHHHHTTTCSEECCCCCCCCEE-ETTEEECCHHHHHHHHHHSEEEECCCCCC--------
T ss_pred ceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEEechhh-hhhCCCCCHHHHHHHHHCCEEEECCccCCCCc-----
Confidence 479999999999999999999999988999999999999999 99999999999999999999999999999642
Q ss_pred HhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCC-CCCEEEEeeccCCccccccccccCCCcceeeeecCCCCccc
Q 015012 89 VLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGW-TKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT 167 (414)
Q Consensus 89 ~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~-~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g~~~~ 167 (414)
+++|+|++|||.||||+|+||+++ +|++.+++ ++|||||||||||+|+|.++..
T Consensus 95 ----~~~s~~l~lR~~ldlyan~RP~~~--~pg~~s~~~~vD~vivREnteg~Y~g~e~~~------------------- 149 (354)
T 3blx_B 95 ----GHRSLNLTLRKTFGLFANVRPAKS--IEGFKTTYENVDLVLIRENTEGEYSGIEHIV------------------- 149 (354)
T ss_dssp -----CCCHHHHHHHHHTEEEEEEEEEC--CTTCCCSSCSCEEEEEEECSSEEEEEEEEEC-------------------
T ss_pred ----cccCchHHHHHHcCCEEEEEEecc--cCCCCCCCCCccEEEEecCcCCcccCCcccc-------------------
Confidence 678999999999999999999875 45555554 6999999999999999987631
Q ss_pred hhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCccccCC
Q 015012 168 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAG 245 (414)
Q Consensus 168 ~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~~ 245 (414)
. ++++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|||+|+++|+||+ ++|| +
T Consensus 150 --------~-~~~a~~~~~~T~~~~eRiar~AFe~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva-~eyp------d 213 (354)
T 3blx_B 150 --------C-PGVVQSIKLITRDASERVIRYAFEYARAIGRPRVIVVHKSTIQRLADGLFVNVAKELS-KEYP------D 213 (354)
T ss_dssp --------S-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTTCHHHHHHHHHHHHHG-GGCT------T
T ss_pred --------c-CCEEEEEEEEcHHHHHHHHHHHHHHHHhcCCCeEEEEECCcchHhHHHHHHHHHHHHH-HHCC------C
Confidence 0 457887 9999999999999999999999 5679999999999999999999999996 7999 9
Q ss_pred eEEeeeeHHHHHHHHhhCCCcc---EEEeCCcchhhHhhhhhhh-cCCccccccceecCCCceEEEccccCccccccccc
Q 015012 246 IWYEHRLIDDMVAYALKSEGGY---VWACKNYDGDVQSDFLAQG-FGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVH 321 (414)
Q Consensus 246 I~~~~~~VDa~~~~lv~~P~~f---Viv~~NlfGDILSDlaa~l-~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~d 321 (414)
|+++|++||+|+||||++|++| ||||+|||||||||++|++ +|||||+||+|+|++ .+||||+||||| |
T Consensus 214 I~~~~~~vD~~~m~lv~~P~~FD~~Vivt~NlfGDIlSD~aa~l~~GslGl~pSanig~~--~a~fEp~HGSAP-----d 286 (354)
T 3blx_B 214 LTLETELIDNSVLKVVTNPSAYTDAVSVCPNLYGDILSDLNSGLSAGSLGLTPSANIGHK--ISIFEAVHGSAP-----D 286 (354)
T ss_dssp SEEEEEEHHHHHHHHHHCGGGGTTEEEEECHHHHHHHHHHHHHHHTSSGGGCEEEEEESS--CEEEEECSCCCG-----G
T ss_pred ceEEEEEHHHHHHHHhhChhhCCceEEEecCcccchhHHHHHhhccCCccccceeEECCC--ceEEecCCCChh-----h
Confidence 9999999999999999999999 9999999999999999999 999999999999987 489999999999 9
Q ss_pred ccCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC--CCccchhhhccCCcCCcccccCHHHHH
Q 015012 322 QKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG--KMTKDLALIIHGSKMTREHYLNTEEFI 399 (414)
Q Consensus 322 IaGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G--~~T~Dlg~~~~G~~~~~~~~~sT~e~~ 399 (414)
|||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| | .+||+||+
T Consensus 287 iAGk~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g~~~~T~Dlg----G-------~~~T~e~~ 347 (354)
T 3blx_B 287 IAGQDK-ANPTALLLSSVMMLNHMGL-------TNHADQIQNAVLSTIASGPENRTGDLA----G-------TATTSSFT 347 (354)
T ss_dssp GTTTTC-CCTHHHHHHHHHHHHHHTC-------HHHHHHHHHTHHHHHTSSTTSSCGGGT----C-------CCCHHHHH
T ss_pred hcCCCc-cCcHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCCccCCCcC----C-------CCCHHHHH
Confidence 999999 9999999999999999985 789999999999999999 8999998 7 68999999
Q ss_pred HHHHHHH
Q 015012 400 DAVADDL 406 (414)
Q Consensus 400 daV~~~l 406 (414)
|+|+++|
T Consensus 348 dav~~~l 354 (354)
T 3blx_B 348 EAVIKRL 354 (354)
T ss_dssp HHHHHTC
T ss_pred HHHHhhC
Confidence 9999864
No 26
>3blx_A Isocitrate dehydrogenase [NAD] subunit 1; TCA cycle, oxidative metabolism, allostery, decarboxylase, allosteric enzyme, magnesium; 2.70A {Saccharomyces cerevisiae} PDB: 3blw_A 3blv_A*
Probab=100.00 E-value=6e-105 Score=797.80 Aligned_cols=327 Identities=17% Similarity=0.183 Sum_probs=300.0
Q ss_pred ecccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhHHH
Q 015012 8 VANPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKE 87 (414)
Q Consensus 8 m~~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~~e 87 (414)
..++|++|||||||||||+++++||.+.+++|+|+++++|+ ++|+++|++++++|+++|++||||+++|...
T Consensus 16 ~~~~I~vipGDGIGpEv~~~~~~Vl~a~~~~i~~~~~~~G~----~~g~~lp~~tl~~~~~~da~l~Gav~~P~~~---- 87 (349)
T 3blx_A 16 GRFTVTLIPGDGVGKEITDSVRTIFEAENIPIDWETINIKQ----TDHKEGVYEAVESLKRNKIGLKGLWHTPADQ---- 87 (349)
T ss_dssp CCEEEEEEEESHHHHHHHHHHHHHHHHTTCSEEEEECCCSS----TTCHHHHHHHHHHHHHHSEEEEEECCSHHHH----
T ss_pred CceEEEEECCCCcCHHHHHHHHHHHHHcCCCeEEEEEecCc----ccCCcCcHHHHHHHHHCCEEEECCccCCCCC----
Confidence 34799999999999999999999998889999999999998 7999999999999999999999999999421
Q ss_pred HHhhhcCCCcchhHhhhcCceEEeeeeeccCCCCCCCCC-CCCEEEEeeccCCccccccccccCCCcceeeeecCCCCcc
Q 015012 88 FVLKQMWKSPNGTIRNILNGTVFREPIICKNVPRLIPGW-TKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEK 166 (414)
Q Consensus 88 ~~l~~~~~s~~~~LRk~ldlyan~RPi~~~~~~~l~~~~-~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g~~~ 166 (414)
++++|+|++|||+||||+|+||+++ +|++.+++ ++|||||||||||+|+|.++..
T Consensus 88 ----~~~~s~~l~lR~~ldlyan~RP~~~--~pg~~~~~~~vD~vivREnteg~Y~g~e~~~------------------ 143 (349)
T 3blx_A 88 ----TGHGSLNVALRKQLDIYANVALFKS--LKGVKTRIPDIDLIVIRENTEGEFSGLEHES------------------ 143 (349)
T ss_dssp ----HTCHHHHHHHHHTSCEEEEEEEEEC--CTTCCCSSCSCEEEEEEECSSGGGGCEEEEC------------------
T ss_pred ----CCccCchHHHHHHcCCEEEEEEEec--cCCCCCCCCCcCEEEEecCCCCcEeCCceec------------------
Confidence 1678899999999999999999874 45555554 6999999999999999987631
Q ss_pred chhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhC-CCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCccccC
Q 015012 167 TELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQK-KWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAA 244 (414)
Q Consensus 167 ~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r-~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~ 244 (414)
. .+++++ ++|||+++|||+|+||+||++| ++|||+|||+|||+.|||+|+++|+||+.++||
T Consensus 144 ---------~-~gva~~~~~~T~~~~eRiar~AF~~A~~r~rkkVt~v~KaNvlk~sdglf~~~~~eva~~eyp------ 207 (349)
T 3blx_A 144 ---------V-PGVVESLKVMTRPKTERIARFAFDFAKKYNRKSVTAVHKANIMKLGDGLFRNIITEIGQKEYP------ 207 (349)
T ss_dssp ---------S-TTEEEEEEEEEHHHHHHHHHHHHHHHHHTTCCEEEEEECTTTSTTHHHHHHHHHHHHHHHHCT------
T ss_pred ---------c-CCeEEEEEEeCHHHHHHHHHHHHHHHHhcCCCcEEEEeCCccchhhHHHHHHHHHHHHHhhCC------
Confidence 0 357777 9999999999999999999999 557999999999999999999999999747999
Q ss_pred CeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEcccc-Ccccccccccc
Q 015012 245 GIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAH-GTVTRHYRVHQ 322 (414)
Q Consensus 245 ~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~H-GSAP~~~~~dI 322 (414)
+|+++|++||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+|++ .+||||+| |||| ||
T Consensus 208 ~i~~~~~~vD~~~~qlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig~~--~a~fEpvH~GSAP-----di 280 (349)
T 3blx_A 208 DIDVSSIIVDNASMQAVAKPHQFDVLVTPSMYGTILGNIGAALIGGPGLVAGANFGRD--YAVFEPGSRHVGL-----DI 280 (349)
T ss_dssp TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHHTCGGGCEEEEEESS--CEEECCTTTTSCC-------
T ss_pred CeeEEEeeHHHHHHHHhhCcccccEEEECCcchHHHHHHHHhhcCCcccceEEEECCC--ceeEcCCCCCchh-----hh
Confidence 99999999999999999999999 9999999999999999999999999999999987 48999999 9999 99
Q ss_pred cCCCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC-CCccchhhhccCCcCCcccccCHHHHHHH
Q 015012 323 KGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG-KMTKDLALIIHGSKMTREHYLNTEEFIDA 401 (414)
Q Consensus 323 aGk~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G-~~T~Dlg~~~~G~~~~~~~~~sT~e~~da 401 (414)
||||+ |||+|+|||++|||+|||+ .++|++|++||.+++++| ++|+||| | .+||+||+|+
T Consensus 281 AGk~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~G~~~T~Dlg----g-------~~~T~e~~da 341 (349)
T 3blx_A 281 KGQNV-ANPTAMILSSTLMLNHLGL-------NEYATRISKAVHETIAEGKHTTRDIG----G-------SSSTTDFTNE 341 (349)
T ss_dssp CCTTC-SCCHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHSSSSCBGGGT----C-------CBCHHHHHHH
T ss_pred cCCCC-CCcHHHHHHHHHHHHhcCc-------HHHHHHHHHHHHHHHHcCCccCCCcC----C-------CCCHHHHHHH
Confidence 99999 9999999999999999985 689999999999999999 8999998 7 6899999999
Q ss_pred HHHHHHH
Q 015012 402 VADDLRA 408 (414)
Q Consensus 402 V~~~l~~ 408 (414)
|+++|+.
T Consensus 342 I~~~l~~ 348 (349)
T 3blx_A 342 IINKLST 348 (349)
T ss_dssp HHHHHHT
T ss_pred HHHHhcc
Confidence 9999953
No 27
>1a05_A IPMDH, IMDH, 3-isopropylmalate dehydrogenase; oxidoreductase, decarboxylating dehydrogenase, leucine biosynthesis; HET: IPM; 2.00A {Acidithiobacillus ferrooxidans} SCOP: c.77.1.1
Probab=100.00 E-value=1.6e-104 Score=798.85 Aligned_cols=341 Identities=21% Similarity=0.245 Sum_probs=299.6
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcC----CCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhH
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFP----FLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARV 85 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~----~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~ 85 (414)
++|++|||||||||||+++++||.+. +++|+|+++++|++++++||+++|++++++|+++|++||||+++|.+..+
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~~~~~G~~~~~~~g~~lp~~tl~~~~~~da~l~Gavg~p~~~~~ 81 (358)
T 1a05_A 2 KKIAIFAGDGIGPEIVAAARQVLDAVDQAAHLGLRCTEGLVGGAALDASDDPLPAASLQLAMAADAVILGAVGGPRWDAY 81 (358)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHHHHHTCCCEEEECCCHHHHHHHHSSSSCHHHHHHHHHCSEEEEEECCCGGGTTS
T ss_pred cEEEEECCCCcCHHHHHHHHHHHHHHHHhcCCceEEEEEeCCcHHHHhhCCcCCHHHHHHHHHCCEEEECCccCCCcccC
Confidence 68999999999999999999998654 78999999999999999999999999999999999999999999964321
Q ss_pred HHHHhhhcCCCcchhHhhhcCceEEeeeeec-cCCC---CCCC--CCCCCEEEEeeccCCccccccccccCCCcceeeee
Q 015012 86 KEFVLKQMWKSPNGTIRNILNGTVFREPIIC-KNVP---RLIP--GWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFV 159 (414)
Q Consensus 86 ~e~~l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~---~l~~--~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~ 159 (414)
+. + ..++++ |++|||.||||+|+||+++ ++++ |+++ ..++|||||||||||+|+|.++...
T Consensus 82 ~~-~-~~~e~~-ll~lRk~ldlyanvRP~~~~pgl~~~splk~~~~~~vDivIvREnteg~Y~g~~~~~~---------- 148 (358)
T 1a05_A 82 PP-A-KRPEQG-LLRLRKGLDLYANLRPAQIFPQLLDASPLRPELVRDVDILVVRELTGDIYFGQPRGLE---------- 148 (358)
T ss_dssp CG-G-GSHHHH-HHHHHHHHTCCEEEEEEECCTTSGGGCSBCHHHHTTCEEEEEEECSSSTTTCSSCEEE----------
T ss_pred Cc-c-ccchhh-HHHHHHHcCCEEEEEEEEecCCccCCCCCccccCCCceEEEEEecCCCcccCCcCccc----------
Confidence 10 0 012344 8999999999999999987 3441 3332 1269999999999999999754210
Q ss_pred cCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcC
Q 015012 160 PEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWK 238 (414)
Q Consensus 160 ~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp 238 (414)
+. .+ .+++++ ++|||+++|||+|+||+||++|+++||+|||+|||+ ++|+|+++|+||+ ++||
T Consensus 149 ~~-------------~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk-~~~lf~~~~~eva-~eyp 212 (358)
T 1a05_A 149 VI-------------DG-KRRGFNTMVYDEDEIRRIAHVAFRAAQGRRKQLCSVDKANVLE-TTRLWREVVTEVA-RDYP 212 (358)
T ss_dssp EE-------------TT-EEEEEEEEEEEHHHHHHHHHHHHHHHHTTTSEEEEEECTTTCH-HHHHHHHHHHHHG-GGCT
T ss_pred cC-------------CC-CceEEEEEEEcHHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-cchhHHHHHHHHH-HHCC
Confidence 00 01 356777 999999999999999999999988899999999999 8999999999996 7999
Q ss_pred CccccCCeEEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCccccc
Q 015012 239 SKFEAAGIWYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH 317 (414)
Q Consensus 239 ~~~~~~~I~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~ 317 (414)
+|+++|++||+|+||||++|++| ||||+|||||||||++|+++|||||+||+|+| ++ ++||||+|||||
T Consensus 213 ------dI~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~pSanig-~~-~~~fEpvHGSAP-- 282 (358)
T 1a05_A 213 ------DVRLSHMYVDNAAMQLIRAPAQFDVLLTGNMFGDILSDEASQLTGSIGMLPSASLG-EG-RAMYEPIHGSAP-- 282 (358)
T ss_dssp ------TSEEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHTTSCGGGCEEEEEC-SS-CEEEEESSCCCG--
T ss_pred ------CceEEeeeHHHHHHHHHhCCCcccEEEecCcccHhHHHHHHhhcCCccccceeeeC-CC-ceeeecCCCChh--
Confidence 99999999999999999999999 99999999999999999999999999999999 44 699999999999
Q ss_pred ccccccCCCCccChhHHHHHHHHHHHH-hccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHH
Q 015012 318 YRVHQKGGETSTNSIASIFAWSRGLAH-RAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTE 396 (414)
Q Consensus 318 ~~~dIaGk~i~ANP~a~IlS~ammL~~-lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~ 396 (414)
||||||+ |||+|+|||++|||+| ||+ .++|++|++||.+++++|++|+||++ .|. +.+||+
T Consensus 283 ---diAGk~i-ANP~A~IlS~ammL~~~lg~-------~~~A~~Ie~Av~~~l~~g~~T~Dl~g--~g~-----~~~~T~ 344 (358)
T 1a05_A 283 ---DIAGQDK-ANPLATILSVAMMLRHSLNA-------EPWAQRVEAAVQRVLDQGLRTADIAA--PGT-----PVIGTK 344 (358)
T ss_dssp ---GGTTTTC-SCCHHHHHHHHHHHHHTSSC-------HHHHHHHHHHHHHHHHTTCCCGGGCC--TTS-----CCCCHH
T ss_pred ---HhcCCCc-cCcHHHHHHHHHHHHHHcCC-------HHHHHHHHHHHHHHHHcCCcCccccc--CCC-----CCcCHH
Confidence 9999999 9999999999999999 885 79999999999999999999999951 121 128999
Q ss_pred HHHHHHHHHHH
Q 015012 397 EFIDAVADDLR 407 (414)
Q Consensus 397 e~~daV~~~l~ 407 (414)
||+|+|+++|+
T Consensus 345 e~~daV~~~l~ 355 (358)
T 1a05_A 345 AMGAAVVNALN 355 (358)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHhh
Confidence 99999999984
No 28
>1w0d_A 3-isopropylmalate dehydrogenase; oxidoreductase, leucine biosynthesis, NAD, ST genomics, PSI, protein structure initiative; 1.65A {Mycobacterium tuberculosis} SCOP: c.77.1.1 PDB: 2g4o_A
Probab=100.00 E-value=6.7e-104 Score=788.15 Aligned_cols=331 Identities=18% Similarity=0.160 Sum_probs=296.3
Q ss_pred ccEEEECCCCchHHHHHHHHHHHhcCCCceEEEEEecCchhhhhcCCCCCHHHHHHHHcCCeeeecccCCCCchhHHHHH
Q 015012 10 NPIVEMDGDEMTRVFWKSIKDKLIFPFLELDIKYFDLGLPNRDATDDKVTVESAEATLKYNVAIKCATITPDEARVKEFV 89 (414)
Q Consensus 10 ~~I~vi~GDGIGpEv~~~~~~v~~~~~~~i~~~~~~~G~~~~~~~g~~lp~~~~dai~~~~v~lkg~~~tp~~~~~~e~~ 89 (414)
++|++|||||||||||+++++||.+...+|+|+++++|++++++||+++|++++++|+++|++||||++||..++ +
T Consensus 2 ~~I~vipGDGIGpEv~~~a~~Vl~a~~~~~~~~~~~~G~~~~~~~g~~lp~~t~~~~~~~da~l~Gav~~P~~~~----~ 77 (337)
T 1w0d_A 2 SKLAIIAGDGIGPEVTAEAVKVLDAVVPGVQKTSYDLGARRFHATGEVLPDSVVAELRNHDAILLGAIGDPSVPS----G 77 (337)
T ss_dssp CEEEEEEESTTHHHHHHHHHHHHHHHSTTCEEEECCCSHHHHHHHSCSSCHHHHHHHTTSSEEEEEECCCTTSCT----T
T ss_pred cEEEEeCCCCcCHHHHHHHHHHHHHhcCCcEEEEEecchHHHhhhCCcCCHHHHHHHHHCCEEEECCccCCCCCC----c
Confidence 689999999999999999999987654469999999999999999999999999999999999999999995321 0
Q ss_pred hhhcCCCcchhHhhhcCceEEeeeeec-cCCC-CCCCCCCCCEEEEeeccCCccccccccccCCCcceeeeecCCCCccc
Q 015012 90 LKQMWKSPNGTIRNILNGTVFREPIIC-KNVP-RLIPGWTKPICIGRHAFGDQYRATDTVIQGPGKLKLVFVPEGKDEKT 167 (414)
Q Consensus 90 l~~~~~s~~~~LRk~ldlyan~RPi~~-~~~~-~l~~~~~iDivivREnteg~Y~g~e~~~~~~g~~~~~~~~~~g~~~~ 167 (414)
.+++|+|++|||+||||+|+||+++ ++++ |+++..++|||||||||||+|+|.+++.. .|
T Consensus 78 --~~~~s~~l~lR~~ldlyan~RP~~~~pg~~s~l~~~~~~DivivREnteg~Y~g~e~~~~------------~g---- 139 (337)
T 1w0d_A 78 --VLERGLLLRLRFELDHHINLRPARLYPGVASPLSGNPGIDFVVVREGTEGPYTGNGGAIR------------VG---- 139 (337)
T ss_dssp --HHHHHTHHHHHHHTTCCEEEEEEECCTTCCCSBTTCCCCEEEEEEECSCSGGGCCEEEES------------TT----
T ss_pred --ccccchHHHHHHHcCCEEEEEEeecCCCCCCcccCCCCCcEEEEecCCCCeecCCcceec------------CC----
Confidence 1357889999999999999999976 4443 33220129999999999999999876531 01
Q ss_pred hhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCcccccchHHHHHHHHHHHhhcCCccccCCe
Q 015012 168 ELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGI 246 (414)
Q Consensus 168 ~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~~I 246 (414)
++ ++++++ ++|||+++|||+|+||+||++|++|||+|||+|||+.|||+|+++|+||+ ++|| +|
T Consensus 140 -------~~-~~~a~~~~~~T~~~~eRiar~AFe~A~~rrkkVt~v~KaNvlk~s~glf~~~~~eva-~eyp------~i 204 (337)
T 1w0d_A 140 -------TP-NEVATEVSVNTAFGVRRVVADAFERARRRRKHLTLVHKTNVLTFAGGLWLRTVDEVG-ECYP------DV 204 (337)
T ss_dssp -------ST-TCEEEEEEEEEHHHHHHHHHHHHHHHHHTTSEEEEEECTTTSHHHHHHHHHHHHHHH-TTCT------TS
T ss_pred -------CC-CCeEEEEEEEcHHHHHHHHHHHHHHHHHcCCeEEEEECCccchhhhHHHHHHHHHHH-HHCC------ce
Confidence 01 468888 99999999999999999999998889999999999999999999999997 7999 99
Q ss_pred EEeeeeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCc-eEEEccccCcccccccccccC
Q 015012 247 WYEHRLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGK-TIEAEAAHGTVTRHYRVHQKG 324 (414)
Q Consensus 247 ~~~~~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~-~a~FEp~HGSAP~~~~~dIaG 324 (414)
+++|++||+||||||++|++| ||||+|||||||||++|+++|||||+||+|+|+++. ++||||+||||| ||||
T Consensus 205 ~~~~~~vD~~~mqlv~~P~~FDVivt~NlfGDIlSD~aa~l~GslGl~psanig~~~~~~a~fEp~HGSAP-----diAG 279 (337)
T 1w0d_A 205 EVAYQHVDAATIHMITDPGRFDVIVTDNLFGDIITDLAAAVCGGIGLAASGNIDATRANPSMFEPVHGSAP-----DIAG 279 (337)
T ss_dssp EEEEEEHHHHHHHHHHCGGGCSEEEECHHHHHHHHHHHHHHTTCGGGCEEEEECTTCSSCEEEEESSCCCG-----GGTT
T ss_pred EEEEEEHHHHHHHHhhCcccccEEEECcchhHHHHHHHhhhcCCcccCceeEeCCCCCCceEEecCCCChh-----hhCC
Confidence 999999999999999999999 999999999999999999999999999999998641 599999999999 9999
Q ss_pred CCCccChhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcCCCccchhhhccCCcCCcccccCHHHHHHHHHH
Q 015012 325 GETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVAD 404 (414)
Q Consensus 325 k~i~ANP~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G~~T~Dlg~~~~G~~~~~~~~~sT~e~~daV~~ 404 (414)
||+ |||+|+|||++|||+|||+ .++|++|++||.+|+++| | |. .+||+||+|+|++
T Consensus 280 k~i-ANP~A~IlS~ammL~~lg~-------~~~A~~Ie~Av~~~l~~g------g----g~------~~~T~e~~~av~~ 335 (337)
T 1w0d_A 280 QGI-ADPTAAIMSVALLLSHLGE-------HDAAARVDRAVEAHLATR------G----SE------RLATSDVGERIAA 335 (337)
T ss_dssp SSC-SCCHHHHHHHHHHHHHTTC-------HHHHHHHHHHHHHHHHHC------T----TC------CCCHHHHHHHHHH
T ss_pred CCC-cCCHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHHHcC------C----CC------CcCHHHHHHHHHh
Confidence 999 9999999999999999885 799999999999999998 5 52 5899999999998
Q ss_pred HH
Q 015012 405 DL 406 (414)
Q Consensus 405 ~l 406 (414)
+|
T Consensus 336 ~l 337 (337)
T 1w0d_A 336 AL 337 (337)
T ss_dssp TC
T ss_pred hC
Confidence 64
No 29
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=96.99 E-value=0.011 Score=61.96 Aligned_cols=183 Identities=14% Similarity=0.150 Sum_probs=120.9
Q ss_pred ceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEE-EEeCCCcccccchHHHHHHHHHHHhhcCCccccCCeEEeeee-HHHH
Q 015012 179 GVALSMYNTDESIRAFAEASMNTAYQKKWPLY-LSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRL-IDDM 256 (414)
Q Consensus 179 ~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt-~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~~I~~~~~~-VDa~ 256 (414)
+++..+.--...++-+++.|..+||..+-+.. -.++.-. -|. +....| +.|=......++.++-+- ++++
T Consensus 454 DIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~Ra---HDa---~lI~kV--~~yL~~hdt~GLdi~Im~p~~A~ 525 (741)
T 1itw_A 454 DIWRMCQAKDAPIQDWVKLAVNRARATNTPAVFWLDPARA---HDA---QVIAKV--ERYLKDYDTSGLDIRILSPVEAT 525 (741)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHTCCEEEECCTTSH---HHH---HHHHHH--HHHHTTSCCTTCCEEEECHHHHH
T ss_pred cchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCCCc---cHH---HHHHHH--HHHHHhcCCCCCceEeeCHHHHH
Confidence 45544445567899999999999999887643 3332211 132 334444 234222333466666553 5555
Q ss_pred HHHH--hhCCCccEEEeCCcchhhHhhhhhhh--cCCccccccceecCCCceEEEcc-ccCcccccccccc-cCCCCccC
Q 015012 257 VAYA--LKSEGGYVWACKNYDGDVQSDFLAQG--FGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETSTN 330 (414)
Q Consensus 257 ~~~l--v~~P~~fViv~~NlfGDILSDlaa~l--~GglGlapSanig~~~~~a~FEp-~HGSAP~~~~~dI-aGk~i~AN 330 (414)
-.-| +++-..-+-||.|..=|+|+||.--| .-|-=|..=.=+=.. -+|||. .-||||+|..+=+ -|-=. =+
T Consensus 526 ~~sleRir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~G--GGLfETGAGGSAPKHVqQ~~eEnhLR-WD 602 (741)
T 1itw_A 526 RFSLARIREGKDTISVTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMSG--GGLFETGAGGSAPKHVQQFLEEGYLR-WD 602 (741)
T ss_dssp HHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSSEEEEEBTTS--CEEEESCSSCCCHHHHHHHHHHSCCC-CC
T ss_pred HHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhcccccC--CccccCCCCcCchHHHHHHHHcCccc-hh
Confidence 4333 34445558899999999999999843 333222211111112 389999 7899999873322 23333 78
Q ss_pred hhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC
Q 015012 331 SIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG 372 (414)
Q Consensus 331 P~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G 372 (414)
.+|-+|+.+--|+||+.-.+|+...-.|+.|++|....|+++
T Consensus 603 SLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~ 644 (741)
T 1itw_A 603 SLGEFLALAASLEHLGNAYKNPKALVLASTLDQATGKILDNN 644 (741)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCC
Confidence 899999999999999987777777778999999999999875
No 30
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=96.96 E-value=0.011 Score=61.90 Aligned_cols=183 Identities=12% Similarity=0.116 Sum_probs=120.6
Q ss_pred ceEEEeeeCHHHHHHHHHHHHHHHHhCCCCEE-EEeCCCcccccchHHHHHHHHHHHhhcCCccccCCeEEeeee-HHHH
Q 015012 179 GVALSMYNTDESIRAFAEASMNTAYQKKWPLY-LSTKNTILKKYDGRFKDIFQEVYEANWKSKFEAAGIWYEHRL-IDDM 256 (414)
Q Consensus 179 ~va~~~~~Tr~~~eRiar~AFe~A~~r~~~Vt-~v~KaNvl~~tdglf~~~~~eva~~~yp~~~~~~~I~~~~~~-VDa~ 256 (414)
+++..+.--...++-+++.|..+||..+-+.. -.++.-. -|. +....| +.|=......++.++-+- ++++
T Consensus 450 DIwRmcq~KDapI~DWVkLAV~Rar~sg~pavFWLD~~Ra---HDa---~lI~kV--~~yL~~hdt~GLdi~Im~p~~A~ 521 (738)
T 2b0t_A 450 DIWRACQVKDAPIQDWVKLAVTRSRLSGMPAVFWLDPERA---HDR---NLASLV--EKYLADHDTEGLDIQILSPVEAT 521 (738)
T ss_dssp CEEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEECCTTCH---HHH---HHHHHH--HHHHTTSCCTTCCEEEECHHHHH
T ss_pred cchhhhhccCchHHHHHHHHHHHHHhcCCCeEEeeCCCCc---cHH---HHHHHH--HHHHHhcCCCCCceEeeCHHHHH
Confidence 45544445567899999999999999887643 3332211 132 334444 234222333466666553 5555
Q ss_pred HHHH--hhCCCccEEEeCCcchhhHhhhhhhh--cCCccccccceecCCCceEEEcc-ccCcccccccccc-cCCCCccC
Q 015012 257 VAYA--LKSEGGYVWACKNYDGDVQSDFLAQG--FGSLGLMTSVLVCPDGKTIEAEA-AHGTVTRHYRVHQ-KGGETSTN 330 (414)
Q Consensus 257 ~~~l--v~~P~~fViv~~NlfGDILSDlaa~l--~GglGlapSanig~~~~~a~FEp-~HGSAP~~~~~dI-aGk~i~AN 330 (414)
-.-| +++-..-+-||.|..=|+|+||.--| .-|-=|..=.=+=.. -+|||. .-||||+|..+=+ -|-=. =+
T Consensus 522 ~~slerir~G~dTISVTGNVLRDYLTDLFPIlELGTSAKMLSIVPLm~G--GGLfETGAGGSAPKHVqQ~~eEnhLR-WD 598 (738)
T 2b0t_A 522 QLSIDRIRRGEDTISVTGNVLRDYNTDLFPILELGTSAKMLSVVPLMAG--GGLFETGAGGSAPKHVQQVQEENHLR-WD 598 (738)
T ss_dssp HHHHHHHHTTCCCEEEECHHHHHHHHHHHHHHHHSCSSSCEEEEEBTTS--CEEEECCSSCCCHHHHHHHHHHSCCC-CC
T ss_pred HHHHHHHHcCCCeEEeechhhhhhccccchhhhhccchhHhhhcccccC--CccccCCCCcCchHHHHHHHHcCccc-hh
Confidence 4333 34445558899999999999999843 333222211111112 389999 7899999874322 23333 78
Q ss_pred hhHHHHHHHHHHHHhccccCchhhHHHHHHHHHHHHHHHhcC
Q 015012 331 SIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESG 372 (414)
Q Consensus 331 P~a~IlS~ammL~~lG~~~~~~~~~~~A~~I~~Av~~~l~~G 372 (414)
.+|-+|+.+--|+|++.-.+|+...-.|+.|++|....|+++
T Consensus 599 SLGEFlALa~Sle~l~~~~~N~kA~vLa~tLD~At~~~L~n~ 640 (738)
T 2b0t_A 599 SLGEFLALAESFRHELNNNGNTKAGVLADALDKATEKLLNEE 640 (738)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHhHHHHHhhcCChHHHHHHHHHHHHHHHHHhCC
Confidence 899999999999999987777777778999999999999875
No 31
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=93.24 E-value=0.05 Score=53.87 Aligned_cols=137 Identities=13% Similarity=0.020 Sum_probs=85.8
Q ss_pred eeeCHHHHHHHHHHHHHHHHhC-C--C-CEEEEeCCCcccccchHHH-H-------HHHHHHHhhcCCccccCCeEE-ee
Q 015012 184 MYNTDESIRAFAEASMNTAYQK-K--W-PLYLSTKNTILKKYDGRFK-D-------IFQEVYEANWKSKFEAAGIWY-EH 250 (414)
Q Consensus 184 ~~~Tr~~~eRiar~AFe~A~~r-~--~-~Vt~v~KaNvl~~tdglf~-~-------~~~eva~~~yp~~~~~~~I~~-~~ 250 (414)
..+|.+.+.+.++...+--+++ + + |+- |-==|==.--+|+|= | +.++. ++ .++.+ -.
T Consensus 173 ~~it~e~i~~~i~~~~~~L~~~fgi~~PrIa-V~GLNPHAGE~G~~G~EE~~iI~Pai~~~-r~--------~Gi~~~GP 242 (328)
T 1yxo_A 173 DAISDERLTRVARILHADLRDKFGIAHPRIL-VCGLNPHAGEGGHLGREEIEVIEPCLERL-RG--------EGLDLIGP 242 (328)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTTCCSSCEEE-EECSSGGGGTTTTTCSHHHHTHHHHHHHH-HT--------TTCEEEEE
T ss_pred HhcCHHHHHHHHHHHHHHHHHHcCCCCCCEE-EEecCCCCCCCCCCCHhHHHHHHHHHHHH-HH--------CCCceeCC
Confidence 4579999999999888755553 3 2 443 322332222245441 1 22222 11 16766 46
Q ss_pred eeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccCCCCcc
Q 015012 251 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETST 329 (414)
Q Consensus 251 ~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~A 329 (414)
.=.|.+-.+-.+ ++| ++|| || -|++-.-+=-+|+--+.|+--.--.----|-||||- ||||||+ |
T Consensus 243 ~paDT~F~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkG~-A 308 (328)
T 1yxo_A 243 LPADTLFTPKHL--EHCDAVLA--MY----HDQGLPVLKYKGFGAAVNVTLGLPIIRTSVDHGTAL-----DLAGSGR-I 308 (328)
T ss_dssp ECHHHHTSHHHH--TTCSEEEE--SS----HHHHHHHHHHHHTTSCEEEEESSSSCEEEECSCCCG-----GGTTTCC-C
T ss_pred CCchhhcccccc--cCCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCCCccc-----cccCCCC-C
Confidence 667877655444 577 5554 44 478877777778888888642110122348999999 9999999 9
Q ss_pred ChhHHHHHHHHHHHH
Q 015012 330 NSIASIFAWSRGLAH 344 (414)
Q Consensus 330 NP~a~IlS~ammL~~ 344 (414)
||.+++-|.-+..+.
T Consensus 309 ~~~Sl~~Ai~~A~~~ 323 (328)
T 1yxo_A 309 DSGSLQVALETAYQM 323 (328)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999997666554
No 32
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=93.16 E-value=0.05 Score=53.92 Aligned_cols=135 Identities=13% Similarity=0.051 Sum_probs=85.0
Q ss_pred eeeCHHHHHHHHHHHHHHHHh-CC--C-CEEEEeCCCcccccchHHH-H-------HHHHHHHhhcCCccccCCeEE-ee
Q 015012 184 MYNTDESIRAFAEASMNTAYQ-KK--W-PLYLSTKNTILKKYDGRFK-D-------IFQEVYEANWKSKFEAAGIWY-EH 250 (414)
Q Consensus 184 ~~~Tr~~~eRiar~AFe~A~~-r~--~-~Vt~v~KaNvl~~tdglf~-~-------~~~eva~~~yp~~~~~~~I~~-~~ 250 (414)
..+|.+.+.+.++...+ -++ -+ + |+- |-==|==.--+|+|= | +.++. ++ .+|.+ -.
T Consensus 180 ~~it~e~i~~~i~~~~~-L~~~fgi~~PrIa-V~GLNPHAGE~G~~G~EE~~iI~PAi~~~-r~--------~Gi~~~GP 248 (330)
T 2hi1_A 180 DTLSTARVETVIGIADT-FLKRVGYVKPRIA-VAGVNPHAGENGLFGDEETRILTPAITDA-RA--------KGMDVYGP 248 (330)
T ss_dssp HHCCHHHHHHHHHHHHH-HHHHTTCSSCEEE-EECSSGGGSSTTSCCHHHHHTHHHHHHHH-HT--------TTCEEEEE
T ss_pred HhcCHHHHHHHHHHHHH-HHHHcCCCCCCEE-EEecCCCCCCCCCCCHhHHHHHHHHHHHH-HH--------CCCceeCC
Confidence 45899999999999988 333 23 2 443 322332222244441 2 22222 11 16766 46
Q ss_pred eeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccCCCCcc
Q 015012 251 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETST 329 (414)
Q Consensus 251 ~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~A 329 (414)
.=.|.+-.+-.+ ++| ++|| || -|++-.-+=-+|+--+.|+--.--.----|-||||- ||||||+ |
T Consensus 249 ~paDT~F~~~~~--~~~D~vla--MY----HDQGlip~K~l~F~~gVNvTlGLP~iRTSvDHGTAf-----DIAGkG~-A 314 (330)
T 2hi1_A 249 CPPDTVFLQAYE--GQYDMVVA--MY----HDQGHIPLKLLGFYDGVNITAGLPFIRTSADHGTAF-----DIAWTGK-A 314 (330)
T ss_dssp ECHHHHHHHHHT--TSCSEEEE--SS----HHHHHHHHHHCC-CCSEEEEETSSSEEEEESCCCCT-----TTTTTTC-C
T ss_pred CCchhhcccccc--ccCCEEEE--cc----cccccHhHhhcccCcceEEecCCCEEEecCCCCccc-----cccCCCC-C
Confidence 667887665544 678 5554 44 488888788888888888642110123458999999 9999999 9
Q ss_pred ChhHHHHHHHHHHH
Q 015012 330 NSIASIFAWSRGLA 343 (414)
Q Consensus 330 NP~a~IlS~ammL~ 343 (414)
||.+++-|.-+..+
T Consensus 315 ~~~Sl~~Ai~~A~~ 328 (330)
T 2hi1_A 315 KSESMAVSIKLAMQ 328 (330)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 99999998766554
No 33
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=93.09 E-value=0.054 Score=53.76 Aligned_cols=137 Identities=14% Similarity=-0.005 Sum_probs=86.6
Q ss_pred eeeCHHHHHHHHHHHHHHHHhC-C---CCEEEEeCCCcccccchHH--------HHHHHHHHHhhcCCccccCCeEEe-e
Q 015012 184 MYNTDESIRAFAEASMNTAYQK-K---WPLYLSTKNTILKKYDGRF--------KDIFQEVYEANWKSKFEAAGIWYE-H 250 (414)
Q Consensus 184 ~~~Tr~~~eRiar~AFe~A~~r-~---~~Vt~v~KaNvl~~tdglf--------~~~~~eva~~~yp~~~~~~~I~~~-~ 250 (414)
..+|.+.+.+.++.+.+.-+++ + -|+-+.- -|=-.--.|+| +-+.++. +++ ++.+. .
T Consensus 178 ~~it~e~i~~~i~~~~~~l~~~fGi~~PrIAV~g-LNPHAGE~G~~G~EE~~iI~PAi~~l-r~~--------Gi~~~GP 247 (334)
T 3lxy_A 178 GAITQASLHEVITILDNDLKTKFGITQPQIYVCG-LNPHAGEGGHMGHEEIDTIIPALNTL-RQQ--------GINLIGP 247 (334)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTSCCSSCCEEEEC-SSGGGGGGGTTCSHHHHTHHHHHHHH-HHT--------TCCEEEE
T ss_pred hhCCHHHHHHHHHHHHHHHHHHcCCCCCCEEEEe-cCCCCCCCCCCCchhHHHHHHHHHHH-HHC--------CCceeCC
Confidence 4578999999999988776653 2 2565542 11111123333 3334443 221 56554 6
Q ss_pred eeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccCCCCcc
Q 015012 251 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETST 329 (414)
Q Consensus 251 ~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~A 329 (414)
+-.|++-.+-.+ ++| ++||.+. |++-.-.--+++--+.|+--.--.----|-||||- ||||||+ |
T Consensus 248 ~paDt~F~~~~~--~~~D~vlaMYH------DQGlip~K~l~F~~gVNvTlGLP~iRTS~DHGTAf-----DIAGkG~-A 313 (334)
T 3lxy_A 248 LPADTLFQPKYL--QHADAVLAMYH------DQGLPVLKYQGFGRAVNITLGLPFIRTSVDHGTAL-----ELAATGT-A 313 (334)
T ss_dssp ECHHHHTSHHHH--TTCSEEEESSH------HHHHHHHHHHHTTCCEEEEESSSSCEEEESSCCCG-----GGTTTTC-S
T ss_pred CChHHhcChhhh--ccCCEEEEccc------chhhHhHHhcccCccEEEecCCCeeeecCCCCcch-----hhccCCC-C
Confidence 778888655544 678 8888654 56666566667777778641110122348999999 9999999 9
Q ss_pred ChhHHHHHHHHHHHH
Q 015012 330 NSIASIFAWSRGLAH 344 (414)
Q Consensus 330 NP~a~IlS~ammL~~ 344 (414)
||.+++-|.-+..+.
T Consensus 314 ~~~S~~~Ai~~A~~~ 328 (334)
T 3lxy_A 314 DVGSFITALNLAIKM 328 (334)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHH
Confidence 999999987766654
No 34
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=93.08 E-value=0.049 Score=54.32 Aligned_cols=133 Identities=11% Similarity=0.001 Sum_probs=77.1
Q ss_pred eeeCHHHHHHHHHHHHHHHHhCC--C-CEEEEeCCCcccccchHH-HH-------HHHHHHHhhcCCccccCCeEEe-ee
Q 015012 184 MYNTDESIRAFAEASMNTAYQKK--W-PLYLSTKNTILKKYDGRF-KD-------IFQEVYEANWKSKFEAAGIWYE-HR 251 (414)
Q Consensus 184 ~~~Tr~~~eRiar~AFe~A~~r~--~-~Vt~v~KaNvl~~tdglf-~~-------~~~eva~~~yp~~~~~~~I~~~-~~ 251 (414)
..+|.+.+.+.++...+.-++-+ + |+-+. ==|==...+|+| +| +.++. ++ . ++.+. ..
T Consensus 195 ~~It~~~I~~~i~~~~~~l~~fgi~~PrIaV~-GLNPHaGE~G~~G~EE~~iI~Pai~~l-~~--~------gi~v~GP~ 264 (349)
T 4aty_A 195 ARLDQRHVERAARAAVQALQLMGIAHPVVGLM-GINPHAGEGGLFGRDDIDITEPVARKL-RD--D------GMTVIGPQ 264 (349)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTC-CCCCEEEE-CSSGGGGTTTTTCSHHHHTHHHHHHHH-HH--C-------CCEEEEE
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCCCceEEE-ecCCCCCccccccchHHHHHHHHHHHH-HH--C------CCeEeCCC
Confidence 55788888888887766555443 2 44332 122222234444 11 22222 22 1 45443 55
Q ss_pred eHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccCCCCccC
Q 015012 252 LIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTN 330 (414)
Q Consensus 252 ~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk~i~AN 330 (414)
=.|.+- .+.+| ++|+ || -|++-.-+=.+++--+.|+--.--.----|-||||- ||||||+ ||
T Consensus 265 paDt~F-----~~~~~D~vla--MY----HDQgl~p~K~l~f~~~vnitlGLp~iRtS~dHGta~-----diagkg~-a~ 327 (349)
T 4aty_A 265 GADLLL-----TNPDIDVFVA--MY----HDQGHIPVKLRAGRHSAALSIGAGVLFSSVGHGSGF-----DIAGTLL-AD 327 (349)
T ss_dssp CHHHHT-----TCTTCSEEEE--SS----HHHHHHHHHHHHTTSEEEEEESSSSEEEECCSCCCT-----TSTTTTC-CC
T ss_pred chhhhh-----ccCCCCEEEE--cc----cccchHHHHhcccCCcEEEecCCCeeEeCCCCChhh-----hhccCCC-CC
Confidence 667654 24678 7766 45 466655555556666777541110122358899999 9999999 99
Q ss_pred hhHHHHHHHHHHH
Q 015012 331 SIASIFAWSRGLA 343 (414)
Q Consensus 331 P~a~IlS~ammL~ 343 (414)
|.+++-|.-|...
T Consensus 328 ~~s~~~Ai~~a~~ 340 (349)
T 4aty_A 328 PAPLLGAIRLVTT 340 (349)
T ss_dssp CHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999988766654
No 35
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=91.67 E-value=0.093 Score=52.59 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=51.8
Q ss_pred eeHHHHHHHHhhCCCcc-EEEeCCcchhhHhhhhhhhcCCccccccceecCCCceEEEccccCcccccccccccCCC-Cc
Q 015012 251 RLIDDMVAYALKSEGGY-VWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGE-TS 328 (414)
Q Consensus 251 ~~VDa~~~~lv~~P~~f-Viv~~NlfGDILSDlaa~l~GglGlapSanig~~~~~a~FEp~HGSAP~~~~~dIaGk~-i~ 328 (414)
.=.|.+-.+-.+ ++| .+|| || -|++-.-.=-+|+--+.|+--.--.----|-||||- |||||| +
T Consensus 282 ~paDT~F~~~~~--~~~D~vlA--MY----HDQGliplK~l~F~~gVNvTlGLP~IRTSvDHGTAf-----DIAGkG~~- 347 (367)
T 3tsn_A 282 LVADTAFTKTGL--KNCNRLVA--MY----HDLALAPLKALYFDKSINVSLNLPIIRVSVDHGTAF-----DKAYKNAK- 347 (367)
T ss_dssp BCHHHHTSHHHH--HHCCEEEE--SS----HHHHHHHHHHHCTTTCEEEEESSSSCEEECCCCSCT-----TSCSSCCC-
T ss_pred cCchhhhccchh--cCCCEEEE--cc----ccCcchhhhhcccCccEEEecCCCeeeecCCCCcch-----hhcCCCCc-
Confidence 334555333222 456 5555 34 577766666677777888642110112348999999 999999 9
Q ss_pred cChhHHHHHHHHHHH
Q 015012 329 TNSIASIFAWSRGLA 343 (414)
Q Consensus 329 ANP~a~IlS~ammL~ 343 (414)
|||.+++-|.-+..+
T Consensus 348 Ad~~Sl~~Ai~~A~~ 362 (367)
T 3tsn_A 348 INTKSYFEAAKFAIN 362 (367)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHH
Confidence 999999999776654
No 36
>2qfy_A Isocitrate dehydrogenase [NADP]; rossmann fold, oxidoreductase; HET: AKG; 2.10A {Saccharomyces cerevisiae} PDB: 2qfw_A* 2qfx_A* 2qfv_A*
Probab=72.13 E-value=0.59 Score=47.80 Aligned_cols=16 Identities=6% Similarity=-0.211 Sum_probs=15.4
Q ss_pred CCCEEEEeeccCCccc
Q 015012 127 TKPICIGRHAFGDQYR 142 (414)
Q Consensus 127 ~iDivivREnteg~Y~ 142 (414)
++|++|+||||||+|+
T Consensus 156 ~~D~vivREnteg~Y~ 171 (427)
T 2qfy_A 156 ATDTLIPGPGSLELVY 171 (427)
T ss_dssp CEEEEECSSEEEEEEE
T ss_pred CeeEEEeccCccceee
Confidence 6999999999999999
No 37
>1yxo_A 4-hydroxythreonine-4-phosphate dehydrogenase 1; PA0593,pyridoxine biosynthesis,oxidoreductase, structural GE PSI; 2.01A {Pseudomonas aeruginosa}
Probab=42.29 E-value=14 Score=36.39 Aligned_cols=21 Identities=5% Similarity=0.026 Sum_probs=16.9
Q ss_pred ecccEEEECCC--CchHHHHHHH
Q 015012 8 VANPIVEMDGD--EMTRVFWKSI 28 (414)
Q Consensus 8 m~~~I~vi~GD--GIGpEv~~~~ 28 (414)
|+.+|++-.|| ||||||+-.+
T Consensus 1 m~~~iaIT~GDpaGIGpEii~ka 23 (328)
T 1yxo_A 1 MSLRFALTPGEPAGIGPDLCLLL 23 (328)
T ss_dssp CCCCEEEECCSTTSSHHHHHHHH
T ss_pred CCCEEEEcCCCCcchhHHHHHHH
Confidence 44569999999 9999987644
No 38
>1itw_A Isocitrate dehydrogenase; greece KEY motif, oxidoreductase; HET: ICT; 1.95A {Azotobacter vinelandii} SCOP: c.77.1.2 PDB: 1j1w_A*
Probab=34.10 E-value=27 Score=36.96 Aligned_cols=114 Identities=17% Similarity=0.287 Sum_probs=70.1
Q ss_pred ccCCccccccccc-cCCCcceeeeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEe
Q 015012 136 AFGDQYRATDTVI-QGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLST 213 (414)
Q Consensus 136 nteg~Y~g~e~~~-~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~ 213 (414)
..+|+|....... ...+++++.|+..+|.... + .....-..+-.++ .++|.+....+.....+-|++.+--..+=-
T Consensus 177 ~~gDFy~~EkS~t~~~a~~~~ie~~~~~G~~~v-L-K~~~~l~~gEviDat~Ms~~aL~~F~~~qi~~Ak~~gvLfSlHl 254 (741)
T 1itw_A 177 DNGDFYGSEKAALIGAPGSVKIELIAKDGSSTV-L-KAKTSVQAGEIIDSSVMSKNALRNFIAAEIEDAKKQGVLLSVHL 254 (741)
T ss_dssp SSSSHHHHCEEEECCSSEEEEEEEEETTSCEEE-E-EEEEEECTTCEEEEEEECHHHHHHHHHHHHHHHHHHTCEEEECB
T ss_pred cCCCccCcceeEEecCCCeEEEEEEcCCCcEEE-e-cCCCcccCCcEeehhhhcHHHHHHHHHHHHHHHHHcCceeehhh
Confidence 3456665543332 3566777788877764211 1 0001101233456 999999999999999999988764444445
Q ss_pred CCCcccccchH-H---HHH-HHHHHHhhcCCccccCCeEEeeee
Q 015012 214 KNTILKKYDGR-F---KDI-FQEVYEANWKSKFEAAGIWYEHRL 252 (414)
Q Consensus 214 KaNvl~~tdgl-f---~~~-~~eva~~~yp~~~~~~~I~~~~~~ 252 (414)
|++-||.+|-. | -++ +.+++ +.|.+.|+..+|..+.=+
T Consensus 255 KATMMKVSDPIiFGhaV~vf~kdvF-~k~~~~~~~lGvn~nnGl 297 (741)
T 1itw_A 255 KATMMKVSDPIMFGQIVSEFYKDAL-TKHAEVLKQIGFDVNNGI 297 (741)
T ss_dssp CTTTSTTHHHHHHHHHHHHHTHHHH-HHTHHHHHHTTCCGGGCH
T ss_pred hhccccccCcccccchhhhhhHHHH-HHHHHHHHHcCCCcccCH
Confidence 99999999975 3 232 45555 356666666666555443
No 39
>4aty_A Terephthalate 1,2-CIS-dihydrodiol dehydrogenase; oxidoreductase; 1.85A {Burkholderia xenovorans LB400}
Probab=33.31 E-value=26 Score=34.47 Aligned_cols=21 Identities=10% Similarity=-0.042 Sum_probs=17.4
Q ss_pred ccEEEECCC--CchHHHHHHHHH
Q 015012 10 NPIVEMDGD--EMTRVFWKSIKD 30 (414)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~~~ 30 (414)
.+|++-.|| ||||||+-.+++
T Consensus 9 ~kIaIT~GDPaGIGpEIilKa~~ 31 (349)
T 4aty_A 9 MTVALAIGDPNGIGPEIAVKAAA 31 (349)
T ss_dssp CCEEEECCCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCcchhHHHHHHHHHH
Confidence 579999999 999999866543
No 40
>2hi1_A 4-hydroxythreonine-4-phosphate dehydrogenase 2; pyridoxal phosphate biosynthesis, structural GENO PSI-2, protein structure initiative; 2.30A {Salmonella typhimurium}
Probab=33.14 E-value=25 Score=34.61 Aligned_cols=20 Identities=10% Similarity=0.029 Sum_probs=16.3
Q ss_pred ccEEEECCC--CchHHHHHHHH
Q 015012 10 NPIVEMDGD--EMTRVFWKSIK 29 (414)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~~ 29 (414)
.||++-.|| ||||||+-.++
T Consensus 7 ~~iaIT~GDpaGIGpEii~ka~ 28 (330)
T 2hi1_A 7 KTVAITMGDPAGIGPEIIVKAL 28 (330)
T ss_dssp CCEEEECCCTTTTHHHHHHHHH
T ss_pred CCEEEcCCCCcchhHHHHHHHH
Confidence 349999999 99999876553
No 41
>3lxy_A 4-hydroxythreonine-4-phosphate dehydrogenase; PDXA, NAD-DEPE dehydrogenase, metal-binding, NAD, NADP, oxidoreductase, PY biosynthesis; HET: SUC; 1.70A {Yersinia pestis} SCOP: c.77.1.3 PDB: 1ps6_A* 1ptm_A 1ps7_A 1r8k_A
Probab=31.22 E-value=23 Score=34.82 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=16.0
Q ss_pred ccEEEECCC--CchHHHHHHH
Q 015012 10 NPIVEMDGD--EMTRVFWKSI 28 (414)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~ 28 (414)
.+|++-.|| |||||++-.+
T Consensus 9 ~~iaiT~GDpaGIGpEiilka 29 (334)
T 3lxy_A 9 NRLVITPGEPAGVGPDLAITL 29 (334)
T ss_dssp SEEEEECCCTTSSHHHHHHHH
T ss_pred CEEEEeCCCCccchHHHHHHh
Confidence 689999999 9999987544
No 42
>2b0t_A NADP isocitrate dehydrogenase; monomeric, IDH, oxidoreductase; 1.75A {Corynebacterium glutamicum} PDB: 3mbc_A*
Probab=30.25 E-value=28 Score=36.88 Aligned_cols=114 Identities=19% Similarity=0.236 Sum_probs=68.4
Q ss_pred ccCCccccccccc-cCCCcceeeeecCCCCccchhhhccccCCcceEEE-eeeCHHHHHHHHHHHHHHHHhCCCCEEEEe
Q 015012 136 AFGDQYRATDTVI-QGPGKLKLVFVPEGKDEKTELEVYNFTGEGGVALS-MYNTDESIRAFAEASMNTAYQKKWPLYLST 213 (414)
Q Consensus 136 nteg~Y~g~e~~~-~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~va~~-~~~Tr~~~eRiar~AFe~A~~r~~~Vt~v~ 213 (414)
..+|+|....... ...+++++.|+..+|.... + .....-..+-.++ .++|.+....+.....+-|++.+--..+=-
T Consensus 175 ~~gDFy~~EkS~t~~~a~~~~ie~~~~~G~~~v-L-K~~~~l~~gEviDat~Ms~~aL~~F~~~qi~~Ak~~gvLfSlHl 252 (738)
T 2b0t_A 175 DANDFRHNEKSIILDAADEVQIKHIAADGTETI-L-KDSLKLLEGEVLDGTVLSAKALDAFLLEQVARAKAEGILFSAHL 252 (738)
T ss_dssp SSSSHHHHCEEEECSSCEEEEEEEECSSCCEEE-E-EEEEEECTTCEEEEEEECHHHHHHHHHHHHHHHHHHTCEEEECB
T ss_pred cCCCccCcceeEEecCCCeEEEEEEcCCCcEEE-e-cCCCcccCCcEeehhhhcHHHHHHHHHHHHHHHHHcCceeehhh
Confidence 3456665543332 3566777788877664211 1 0001101233456 999999999999999999988764444445
Q ss_pred CCCcccccchH-H---HHH-HHHHHHhhcCCccccCCeEEeeee
Q 015012 214 KNTILKKYDGR-F---KDI-FQEVYEANWKSKFEAAGIWYEHRL 252 (414)
Q Consensus 214 KaNvl~~tdgl-f---~~~-~~eva~~~yp~~~~~~~I~~~~~~ 252 (414)
|++-||.+|-. | -++ +.+++ +.|.+.|+..+|..+.=+
T Consensus 253 KATMMKVSDPIiFGhaV~vf~kdvF-~k~~~~~~~lGvn~nnGl 295 (738)
T 2b0t_A 253 KATMMKVSDPIIFGHVVRAYFADVF-AQYGEQLLAAGLNGENGL 295 (738)
T ss_dssp CTTTSTTHHHHHHHHHHHHHTHHHH-HHHHHHHHHTTCSSTTHH
T ss_pred hhccccccCcccccchhhhhhHHHH-HHHHHHHHHcCCCcccCH
Confidence 99999999975 2 222 44454 345555655566544333
No 43
>3tsn_A 4-hydroxythreonine-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: UNL; 2.63A {Campylobacter jejuni subsp}
Probab=26.19 E-value=29 Score=34.57 Aligned_cols=19 Identities=11% Similarity=0.013 Sum_probs=16.0
Q ss_pred ccEEEECCC--CchHHHHHHH
Q 015012 10 NPIVEMDGD--EMTRVFWKSI 28 (414)
Q Consensus 10 ~~I~vi~GD--GIGpEv~~~~ 28 (414)
.+|++-.|| ||||||+-.+
T Consensus 5 ~~iaIT~GDpaGIGpEI~~ka 25 (367)
T 3tsn_A 5 KKLAISIGDINSIGLEILVRS 25 (367)
T ss_dssp CEEEEECCCTTTTHHHHHHHH
T ss_pred CEEEEeCCCCccchHHHHHHh
Confidence 468999999 9999997654
No 44
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=22.23 E-value=60 Score=26.00 Aligned_cols=25 Identities=16% Similarity=0.066 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEe
Q 015012 189 ESIRAFAEASMNTAYQKKWPLYLST 213 (414)
Q Consensus 189 ~~~eRiar~AFe~A~~r~~~Vt~v~ 213 (414)
..+++.+++|.++|++.+-+|+++|
T Consensus 16 ~~s~~al~~A~~la~~~~a~l~ll~ 40 (146)
T 3s3t_A 16 DAAQAAFTEAVNIAQRHQANLTALY 40 (146)
T ss_dssp HHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 4588999999999998877776665
No 45
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=21.29 E-value=65 Score=25.74 Aligned_cols=26 Identities=12% Similarity=0.014 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCEEEEeC
Q 015012 189 ESIRAFAEASMNTAYQKKWPLYLSTK 214 (414)
Q Consensus 189 ~~~eRiar~AFe~A~~r~~~Vt~v~K 214 (414)
..+++.+++|.++|++.+-+|+++|=
T Consensus 13 ~~s~~al~~A~~la~~~~a~l~ll~v 38 (147)
T 3hgm_A 13 KGAVKALEKGVGLQQLTGAELYILCV 38 (147)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEEE
Confidence 46889999999999988888888773
No 46
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=20.05 E-value=79 Score=25.74 Aligned_cols=26 Identities=15% Similarity=0.060 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEe
Q 015012 188 DESIRAFAEASMNTAYQKKWPLYLST 213 (414)
Q Consensus 188 r~~~eRiar~AFe~A~~r~~~Vt~v~ 213 (414)
...+++.+++|.++|++.+-+|+++|
T Consensus 27 s~~s~~al~~a~~la~~~~a~l~ll~ 52 (156)
T 3fg9_A 27 NTSSERAFRYATTLAHDYDVPLGICS 52 (156)
T ss_dssp CHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEE
Confidence 35689999999999999887777776
Done!