Query 015013
Match_columns 414
No_of_seqs 453 out of 2996
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 05:07:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015013.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015013hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2goy_A Adenosine phosphosulfat 100.0 3E-62 1E-66 475.8 20.0 239 85-327 27-266 (275)
2 2oq2_A Phosphoadenosine phosph 100.0 1.7E-58 6E-63 446.1 19.2 224 86-322 15-250 (261)
3 2o8v_A Phosphoadenosine phosph 100.0 1.5E-57 5E-62 437.4 16.5 227 83-325 16-247 (252)
4 3fwk_A FMN adenylyltransferase 100.0 3E-45 1E-49 357.7 14.3 180 87-296 31-236 (308)
5 1zun_A Sulfate adenylyltransfe 100.0 5.8E-42 2E-46 340.3 16.7 200 99-307 34-307 (325)
6 1sur_A PAPS reductase; assimil 100.0 3.6E-40 1.2E-44 308.4 17.5 195 84-291 16-215 (215)
7 2wsi_A FAD synthetase; transfe 100.0 2.4E-39 8.3E-44 319.0 13.9 185 100-311 37-251 (306)
8 2ywb_A GMP synthase [glutamine 99.4 2.5E-13 8.6E-18 142.0 10.7 177 103-286 199-383 (503)
9 1wy5_A TILS, hypothetical UPF0 99.4 2.6E-12 8.9E-17 126.5 14.3 155 112-278 24-190 (317)
10 2dpl_A GMP synthetase, GMP syn 99.4 1.6E-12 5.5E-17 127.7 11.2 165 112-285 20-189 (308)
11 3bl5_A Queuosine biosynthesis 99.2 1.5E-11 5.1E-16 113.7 9.2 177 113-293 4-199 (219)
12 3k32_A Uncharacterized protein 99.2 1.5E-11 5.2E-16 113.6 6.3 143 113-275 7-155 (203)
13 3a2k_A TRNA(Ile)-lysidine synt 99.1 3.6E-10 1.2E-14 116.9 13.3 153 112-278 18-188 (464)
14 1ni5_A Putative cell cycle pro 99.1 1.3E-10 4.5E-15 119.2 9.4 148 112-277 13-176 (433)
15 1kor_A Argininosuccinate synth 99.1 1.1E-10 3.8E-15 118.5 8.5 146 114-278 2-166 (400)
16 2pg3_A Queuosine biosynthesis 99.0 1.4E-09 4.7E-14 102.0 11.6 180 113-294 3-203 (232)
17 2hma_A Probable tRNA (5-methyl 99.0 2.7E-09 9.1E-14 107.6 13.1 161 112-276 9-193 (376)
18 3evi_A Phosducin-like protein 98.9 3.5E-10 1.2E-14 95.6 4.1 59 352-410 3-61 (118)
19 3h79_A Thioredoxin-like protei 98.9 1.2E-09 4.2E-14 91.8 7.2 51 350-402 13-63 (127)
20 3zzx_A Thioredoxin; oxidoreduc 98.9 5.2E-10 1.8E-14 92.3 3.2 53 355-408 3-56 (105)
21 1xng_A NH(3)-dependent NAD(+) 98.9 9.2E-09 3.2E-13 98.7 11.9 155 102-276 14-175 (268)
22 2av4_A Thioredoxin-like protei 98.9 8.2E-10 2.8E-14 97.9 3.6 56 354-410 23-80 (160)
23 3tqi_A GMP synthase [glutamine 98.8 3.5E-09 1.2E-13 111.2 7.3 167 113-285 231-406 (527)
24 2der_A TRNA-specific 2-thiouri 98.8 8.3E-09 2.8E-13 104.1 9.7 161 112-276 17-201 (380)
25 3p52_A NH(3)-dependent NAD(+) 98.8 9.9E-09 3.4E-13 97.8 8.6 154 102-275 15-175 (249)
26 2e18_A NH(3)-dependent NAD(+) 98.8 1.8E-08 6.1E-13 96.0 10.0 148 112-281 22-177 (257)
27 2dml_A Protein disulfide-isome 98.8 5E-09 1.7E-13 87.9 5.4 55 346-402 10-65 (130)
28 2djj_A PDI, protein disulfide- 98.8 3.8E-09 1.3E-13 87.4 4.5 51 351-403 6-56 (121)
29 2pu9_C TRX-F, thioredoxin F-ty 98.8 5.1E-09 1.7E-13 85.5 4.9 51 351-402 4-54 (111)
30 3fiu_A NH(3)-dependent NAD(+) 98.8 3.6E-08 1.2E-12 93.9 11.2 157 102-275 18-184 (249)
31 2dj1_A Protein disulfide-isome 98.7 1E-08 3.4E-13 87.2 6.4 50 351-403 16-65 (140)
32 2dbc_A PDCL2, unnamed protein 98.7 3.3E-09 1.1E-13 90.8 3.3 50 352-401 10-59 (135)
33 1x5d_A Protein disulfide-isome 98.7 1.3E-08 4.4E-13 85.5 6.5 49 352-402 7-55 (133)
34 3hxs_A Thioredoxin, TRXP; elec 98.7 5.5E-09 1.9E-13 89.0 4.3 54 349-402 19-81 (141)
35 2trx_A Thioredoxin; electron t 98.7 1.5E-08 5E-13 81.9 6.4 50 351-402 1-50 (108)
36 2dj0_A Thioredoxin-related tra 98.7 1.4E-08 4.9E-13 86.4 5.7 50 352-402 7-56 (137)
37 3gnj_A Thioredoxin domain prot 98.7 1.4E-08 4.7E-13 82.4 5.3 49 352-402 4-52 (111)
38 3qou_A Protein YBBN; thioredox 98.7 1.4E-08 4.8E-13 97.1 6.3 51 351-402 6-56 (287)
39 2dj3_A Protein disulfide-isome 98.7 7E-09 2.4E-13 87.3 3.5 50 351-402 6-55 (133)
40 3tco_A Thioredoxin (TRXA-1); d 98.7 2.2E-08 7.4E-13 80.6 5.9 49 351-402 3-51 (109)
41 1gpm_A GMP synthetase, XMP ami 98.7 5.6E-08 1.9E-12 102.0 10.7 165 113-284 228-403 (525)
42 3aps_A DNAJ homolog subfamily 98.7 2.6E-08 9E-13 82.5 6.3 49 352-402 3-51 (122)
43 2i4a_A Thioredoxin; acidophIle 98.7 3.6E-08 1.2E-12 79.2 6.8 49 352-402 2-50 (107)
44 1faa_A Thioredoxin F; electron 98.7 1.6E-08 5.6E-13 84.1 4.8 51 351-402 17-67 (124)
45 1mek_A Protein disulfide isome 98.6 1.3E-08 4.4E-13 83.3 3.9 48 352-402 7-54 (120)
46 1zma_A Bacterocin transport ac 98.6 3.3E-08 1.1E-12 81.8 6.4 47 352-401 12-58 (118)
47 1t00_A Thioredoxin, TRX; redox 98.6 3.5E-08 1.2E-12 80.3 6.4 49 351-401 4-52 (112)
48 1nsw_A Thioredoxin, TRX; therm 98.6 2.1E-08 7.1E-13 80.6 4.9 46 354-402 2-47 (105)
49 3ed3_A Protein disulfide-isome 98.6 1.8E-08 6.3E-13 98.0 5.4 50 351-402 16-65 (298)
50 3ga4_A Dolichyl-diphosphooligo 98.6 2.5E-08 8.7E-13 90.3 5.8 52 350-402 16-74 (178)
51 1gh2_A Thioredoxin-like protei 98.6 4.1E-08 1.4E-12 79.5 6.4 47 354-401 3-50 (107)
52 3hz4_A Thioredoxin; NYSGXRC, P 98.6 2.7E-08 9.1E-13 85.3 5.4 51 351-403 5-55 (140)
53 3qfa_C Thioredoxin; protein-pr 98.6 9.9E-09 3.4E-13 85.1 2.2 49 353-402 13-61 (116)
54 1thx_A Thioredoxin, thioredoxi 98.6 3.5E-08 1.2E-12 80.4 5.5 50 351-402 6-55 (115)
55 3f3q_A Thioredoxin-1; His TAG, 98.6 1.9E-08 6.6E-13 82.3 3.8 47 353-402 8-54 (109)
56 3die_A Thioredoxin, TRX; elect 98.6 3.2E-08 1.1E-12 79.4 4.9 47 352-402 3-49 (106)
57 3uvt_A Thioredoxin domain-cont 98.6 4.3E-08 1.5E-12 79.3 5.7 47 351-401 4-50 (111)
58 3d6i_A Monothiol glutaredoxin- 98.6 4.1E-08 1.4E-12 80.0 5.6 48 354-401 2-50 (112)
59 1dby_A Chloroplast thioredoxin 98.6 4.1E-08 1.4E-12 79.1 5.6 48 353-402 2-49 (107)
60 3q6o_A Sulfhydryl oxidase 1; p 98.6 4.1E-08 1.4E-12 92.0 6.3 51 351-403 11-61 (244)
61 2o8v_B Thioredoxin 1; disulfid 98.6 4.4E-08 1.5E-12 82.9 5.9 50 351-402 21-70 (128)
62 2yzu_A Thioredoxin; redox prot 98.6 4.5E-08 1.5E-12 78.6 5.7 47 353-402 2-48 (109)
63 2c5s_A THII, probable thiamine 98.6 1.1E-07 3.7E-12 96.9 9.7 144 113-275 188-344 (413)
64 2voc_A Thioredoxin; electron t 98.6 6.2E-08 2.1E-12 79.4 6.2 45 354-402 3-47 (112)
65 3idv_A Protein disulfide-isome 98.6 4.7E-08 1.6E-12 90.4 6.0 51 350-403 13-63 (241)
66 1x5e_A Thioredoxin domain cont 98.6 6.7E-08 2.3E-12 80.7 6.3 46 352-402 7-52 (126)
67 1r26_A Thioredoxin; redox-acti 98.6 4.6E-08 1.6E-12 82.6 5.2 45 354-401 21-66 (125)
68 1w4v_A Thioredoxin, mitochondr 98.6 3.3E-08 1.1E-12 82.1 4.2 51 349-401 10-60 (119)
69 1fb6_A Thioredoxin M; electron 98.6 7.2E-08 2.5E-12 77.1 6.0 47 354-402 2-48 (105)
70 3dxb_A Thioredoxin N-terminall 98.6 5.4E-08 1.9E-12 90.1 5.8 51 351-403 11-61 (222)
71 3cxg_A Putative thioredoxin; m 98.6 2.5E-08 8.4E-13 85.0 3.1 55 346-401 14-69 (133)
72 3p2a_A Thioredoxin 2, putative 98.6 5.9E-08 2E-12 83.6 5.5 49 351-402 37-85 (148)
73 2f51_A Thioredoxin; electron t 98.6 6.5E-08 2.2E-12 80.5 5.5 48 352-401 3-52 (118)
74 2ppt_A Thioredoxin-2; thiredox 98.5 5.6E-08 1.9E-12 85.3 5.3 48 352-402 47-94 (155)
75 2l5l_A Thioredoxin; structural 98.5 7.4E-08 2.5E-12 82.0 5.9 51 352-402 9-68 (136)
76 3emx_A Thioredoxin; structural 98.5 3.7E-08 1.3E-12 84.0 3.9 48 350-402 14-61 (135)
77 2e0q_A Thioredoxin; electron t 98.5 6.9E-08 2.3E-12 76.7 5.3 46 354-402 1-46 (104)
78 2qsi_A Putative hydrogenase ex 98.5 3.6E-08 1.2E-12 85.5 3.8 48 353-402 16-65 (137)
79 2i1u_A Thioredoxin, TRX, MPT46 98.5 1E-07 3.6E-12 78.4 6.2 49 351-401 11-59 (121)
80 1ep7_A Thioredoxin CH1, H-type 98.5 8.5E-08 2.9E-12 77.9 5.6 51 352-402 2-54 (112)
81 3gix_A Thioredoxin-like protei 98.5 2.9E-08 9.9E-13 86.6 2.8 45 357-402 9-53 (149)
82 1a0r_P Phosducin, MEKA, PP33; 98.5 3.6E-08 1.2E-12 93.7 3.4 52 352-403 112-164 (245)
83 2xc2_A Thioredoxinn; oxidoredu 98.5 9.2E-08 3.1E-12 78.8 5.3 49 352-401 13-62 (117)
84 2r2j_A Thioredoxin domain-cont 98.5 7.5E-08 2.6E-12 96.5 5.3 48 352-402 5-52 (382)
85 3uem_A Protein disulfide-isome 98.5 1.7E-07 5.8E-12 92.6 7.6 52 349-402 246-297 (361)
86 1qgv_A Spliceosomal protein U5 98.5 1.1E-07 3.8E-12 82.1 5.6 44 358-402 10-53 (142)
87 2vlu_A Thioredoxin, thioredoxi 98.5 1.6E-07 5.5E-12 77.6 6.0 51 352-402 13-64 (122)
88 1syr_A Thioredoxin; SGPP, stru 98.5 6.8E-08 2.3E-12 79.1 3.5 47 352-401 9-55 (112)
89 4euy_A Uncharacterized protein 98.5 3.9E-08 1.3E-12 79.6 1.7 41 358-401 7-47 (105)
90 2nz2_A Argininosuccinate synth 98.4 1.8E-07 6E-12 95.3 6.7 148 113-277 6-173 (413)
91 2b5e_A Protein disulfide-isome 98.4 2.9E-07 1E-11 95.2 8.5 50 351-402 357-406 (504)
92 1xfl_A Thioredoxin H1; AT3G510 98.4 1.8E-07 6.3E-12 78.5 5.7 50 352-401 16-67 (124)
93 1xwb_A Thioredoxin; dimerizati 98.4 2E-07 6.9E-12 74.6 5.7 47 354-401 2-49 (106)
94 2qgv_A Hydrogenase-1 operon pr 98.4 6.5E-08 2.2E-12 84.2 2.7 48 353-403 18-67 (140)
95 1k92_A Argininosuccinate synth 98.4 1.5E-07 5.1E-12 96.6 5.7 158 112-286 10-192 (455)
96 3d22_A TRXH4, thioredoxin H-ty 98.4 8.8E-08 3E-12 81.4 3.4 51 351-401 23-75 (139)
97 2wz9_A Glutaredoxin-3; protein 98.4 8.2E-08 2.8E-12 83.5 3.3 49 352-401 12-61 (153)
98 1ti3_A Thioredoxin H, PTTRXH1; 98.4 3.1E-07 1.1E-11 74.5 6.2 50 352-401 4-55 (113)
99 2trc_P Phosducin, MEKA, PP33; 98.4 6.9E-08 2.4E-12 89.9 2.5 51 352-402 99-150 (217)
100 2b5e_A Protein disulfide-isome 98.4 2.3E-07 7.8E-12 96.1 6.6 50 351-403 13-62 (504)
101 2vim_A Thioredoxin, TRX; thior 98.4 3.2E-07 1.1E-11 73.1 5.9 46 355-401 2-48 (104)
102 3apq_A DNAJ homolog subfamily 98.4 2.4E-07 8.2E-12 84.8 5.6 48 351-401 96-143 (210)
103 3m9j_A Thioredoxin; oxidoreduc 98.4 3.1E-07 1.1E-11 73.5 5.4 44 358-402 7-50 (105)
104 3f8u_A Protein disulfide-isome 98.4 1.9E-07 6.6E-12 95.9 5.1 51 353-403 2-52 (481)
105 2l6c_A Thioredoxin; oxidoreduc 98.4 1.1E-07 3.6E-12 78.0 2.3 44 354-401 5-48 (110)
106 1oaz_A Thioredoxin 1; immune s 98.4 9.5E-08 3.2E-12 80.3 2.0 50 351-402 2-65 (123)
107 2vm1_A Thioredoxin, thioredoxi 98.4 4E-07 1.4E-11 74.4 5.6 51 352-402 6-58 (118)
108 2oe3_A Thioredoxin-3; electron 98.4 1.2E-07 4.1E-12 78.4 2.3 41 359-402 20-60 (114)
109 2l57_A Uncharacterized protein 98.3 2E-07 7E-12 77.7 3.1 32 370-401 24-55 (126)
110 1z6n_A Hypothetical protein PA 98.3 3.1E-07 1.1E-11 82.0 4.2 45 355-401 39-83 (167)
111 1v98_A Thioredoxin; oxidoreduc 98.3 2.7E-07 9.3E-12 78.6 3.3 48 352-402 33-80 (140)
112 3t58_A Sulfhydryl oxidase 1; o 98.3 6.2E-07 2.1E-11 93.9 6.6 55 347-403 6-61 (519)
113 3f8u_A Protein disulfide-isome 98.3 5.7E-07 1.9E-11 92.4 6.2 52 350-403 350-401 (481)
114 3ul3_B Thioredoxin, thioredoxi 98.3 2.4E-07 8.2E-12 77.8 2.7 33 370-402 40-72 (128)
115 2j23_A Thioredoxin; immune pro 98.3 5.2E-07 1.8E-11 75.1 4.8 49 352-403 15-64 (121)
116 3uow_A GMP synthetase; structu 98.3 1.4E-06 4.9E-11 91.8 9.3 168 112-285 255-435 (556)
117 2kuc_A Putative disulphide-iso 98.3 5.2E-07 1.8E-11 75.4 4.8 50 353-402 7-60 (130)
118 3qcp_A QSOX from trypanosoma b 98.3 3.4E-07 1.2E-11 94.5 4.0 51 351-402 22-72 (470)
119 2yj7_A LPBCA thioredoxin; oxid 97.6 1.2E-07 4.2E-12 75.5 0.0 47 354-402 3-49 (106)
120 3iv4_A Putative oxidoreductase 98.2 5E-07 1.7E-11 75.6 3.4 44 353-399 7-51 (112)
121 3fk8_A Disulphide isomerase; A 98.2 8.4E-07 2.9E-11 74.6 4.3 34 370-403 27-62 (133)
122 3idv_A Protein disulfide-isome 98.2 1.4E-06 4.7E-11 80.4 6.1 48 353-403 131-178 (241)
123 1sen_A Thioredoxin-like protei 98.2 8.4E-07 2.9E-11 78.4 4.3 34 370-403 44-77 (164)
124 3us3_A Calsequestrin-1; calciu 98.2 1.2E-06 4.1E-11 87.4 5.9 49 351-402 12-66 (367)
125 1sji_A Calsequestrin 2, calseq 98.2 7.2E-07 2.4E-11 88.1 4.2 47 352-402 11-64 (350)
126 3f9u_A Putative exported cytoc 98.2 1.3E-06 4.5E-11 76.9 5.4 49 354-402 28-80 (172)
127 3ph9_A Anterior gradient prote 98.2 9.7E-07 3.3E-11 77.6 4.2 31 369-399 41-71 (151)
128 3kp8_A Vkorc1/thioredoxin doma 98.2 1.4E-07 4.6E-12 77.8 -1.2 31 371-401 11-41 (106)
129 1wou_A Thioredoxin -related pr 98.2 1.2E-06 4.1E-11 73.2 4.4 48 353-401 6-60 (123)
130 2fwh_A Thiol:disulfide interch 98.2 7.1E-07 2.4E-11 75.7 2.7 45 357-402 17-64 (134)
131 1wmj_A Thioredoxin H-type; str 98.1 3.6E-07 1.2E-11 76.1 0.8 52 351-402 13-66 (130)
132 3apo_A DNAJ homolog subfamily 98.1 1.5E-06 5E-11 94.8 5.4 49 351-402 115-163 (780)
133 2vxo_A GMP synthase [glutamine 98.1 7.5E-06 2.6E-10 88.5 9.9 59 113-171 241-302 (697)
134 1a8l_A Protein disulfide oxido 98.1 2.8E-06 9.6E-11 77.8 5.2 45 355-402 119-164 (226)
135 1vl2_A Argininosuccinate synth 98.0 8.4E-06 2.9E-10 82.8 8.3 149 110-277 12-182 (421)
136 2es7_A Q8ZP25_salty, putative 97.9 1.9E-06 6.5E-11 74.7 1.3 46 353-401 18-65 (142)
137 2lst_A Thioredoxin; structural 97.2 1.3E-06 4.5E-11 73.0 0.0 34 370-403 17-53 (130)
138 3lwa_A Secreted thiol-disulfid 97.9 7.4E-06 2.5E-10 72.6 4.8 34 371-404 58-91 (183)
139 2ywm_A Glutaredoxin-like prote 97.9 7E-06 2.4E-10 75.5 4.5 45 354-401 120-165 (229)
140 2h30_A Thioredoxin, peptide me 97.9 5.1E-06 1.8E-10 71.7 3.3 46 353-401 22-67 (164)
141 1fo5_A Thioredoxin; disulfide 97.9 5.7E-06 2E-10 63.4 3.0 31 372-402 2-32 (85)
142 1i5g_A Tryparedoxin II; electr 97.9 1.2E-05 4.1E-10 68.2 4.9 32 371-402 27-58 (144)
143 3eur_A Uncharacterized protein 97.9 1.1E-05 3.8E-10 68.3 4.7 32 371-402 30-64 (142)
144 2hls_A Protein disulfide oxido 97.9 1.1E-05 3.9E-10 75.8 5.2 43 357-401 125-167 (243)
145 3raz_A Thioredoxin-related pro 97.8 8.7E-06 3E-10 69.7 3.9 31 371-401 23-53 (151)
146 1lu4_A Soluble secreted antige 97.8 8.6E-06 2.9E-10 67.7 3.4 32 371-402 23-54 (136)
147 3ira_A Conserved protein; meth 97.8 9.2E-06 3.2E-10 73.0 3.7 42 358-402 28-72 (173)
148 3s9f_A Tryparedoxin; thioredox 97.8 1.4E-05 4.9E-10 70.1 4.9 33 371-403 47-79 (165)
149 2c0g_A ERP29 homolog, windbeut 97.8 2.3E-05 7.9E-10 74.4 6.5 45 352-403 16-62 (248)
150 3n05_A NH(3)-dependent NAD(+) 97.8 2.6E-05 9E-10 82.7 7.6 153 102-273 315-473 (590)
151 1o8x_A Tryparedoxin, TRYX, TXN 97.8 1.6E-05 5.5E-10 67.6 4.9 32 371-402 27-58 (146)
152 2djk_A PDI, protein disulfide- 97.8 8.9E-06 3.1E-10 69.0 3.1 47 352-402 6-52 (133)
153 1zzo_A RV1677; thioredoxin fol 97.8 1E-05 3.6E-10 66.9 3.4 32 371-402 24-55 (136)
154 2b5x_A YKUV protein, TRXY; thi 97.8 2.8E-05 9.6E-10 65.3 6.1 44 356-402 16-59 (148)
155 1o73_A Tryparedoxin; electron 97.8 1.8E-05 6.3E-10 66.8 4.9 32 371-402 27-58 (144)
156 1ilo_A Conserved hypothetical 97.8 1.4E-05 4.7E-10 60.3 3.6 28 375-402 2-29 (77)
157 3or5_A Thiol:disulfide interch 97.8 1.6E-05 5.6E-10 68.4 4.3 32 371-402 33-64 (165)
158 1nho_A Probable thioredoxin; b 97.8 9E-06 3.1E-10 62.3 2.3 29 374-402 3-31 (85)
159 2b1k_A Thiol:disulfide interch 97.7 2.1E-05 7.2E-10 68.4 4.8 30 371-400 50-79 (168)
160 3dml_A Putative uncharacterize 97.7 6.9E-06 2.3E-10 69.1 1.3 29 370-398 16-44 (116)
161 3apo_A DNAJ homolog subfamily 97.7 2.7E-05 9.2E-10 84.7 6.3 52 351-402 542-593 (780)
162 3lor_A Thiol-disulfide isomera 97.7 2.2E-05 7.5E-10 67.4 4.4 32 371-402 29-61 (160)
163 3erw_A Sporulation thiol-disul 97.7 2.2E-05 7.4E-10 65.8 4.3 32 371-402 33-64 (145)
164 3ewl_A Uncharacterized conserv 97.7 2.1E-05 7.3E-10 66.2 4.2 33 371-403 26-61 (142)
165 2ju5_A Thioredoxin disulfide i 97.7 2.2E-05 7.5E-10 68.2 4.4 32 370-401 45-80 (154)
166 4fo5_A Thioredoxin-like protei 97.7 1.7E-05 5.8E-10 67.2 3.4 32 371-402 31-62 (143)
167 3hdc_A Thioredoxin family prot 97.7 3.4E-05 1.2E-09 66.6 5.3 32 371-402 40-71 (158)
168 3eyt_A Uncharacterized protein 97.7 2.4E-05 8.3E-10 67.1 4.2 32 371-402 27-59 (158)
169 3ha9_A Uncharacterized thiored 97.7 1.9E-05 6.4E-10 68.5 3.2 32 371-402 36-67 (165)
170 3fkf_A Thiol-disulfide oxidore 97.7 1.7E-05 5.7E-10 66.9 2.7 31 371-401 32-62 (148)
171 2f9s_A Thiol-disulfide oxidore 97.7 3.8E-05 1.3E-09 65.4 4.9 33 371-403 25-57 (151)
172 2lrn_A Thiol:disulfide interch 97.6 3.6E-05 1.2E-09 65.9 4.6 33 371-403 28-60 (152)
173 3ia1_A THIO-disulfide isomeras 97.6 3.7E-05 1.3E-09 65.6 4.6 29 373-401 31-59 (154)
174 2qc7_A ERP31, ERP28, endoplasm 97.6 4.8E-05 1.6E-09 71.8 5.6 44 352-402 5-50 (240)
175 2e7p_A Glutaredoxin; thioredox 97.6 4.1E-05 1.4E-09 62.6 4.5 26 372-398 19-44 (116)
176 3kij_A Probable glutathione pe 97.6 3.8E-05 1.3E-09 68.1 4.5 33 371-403 37-69 (180)
177 3hcz_A Possible thiol-disulfid 97.6 2.4E-05 8.1E-10 65.9 3.0 33 371-403 30-62 (148)
178 2f8a_A Glutathione peroxidase 97.6 4.3E-05 1.5E-09 70.1 4.5 33 371-403 46-78 (208)
179 2lrt_A Uncharacterized protein 97.6 4.3E-05 1.5E-09 65.9 4.3 33 371-403 34-66 (152)
180 1kqp_A NAD+ synthase, NH(3)-de 97.6 0.00012 4.3E-09 70.1 7.7 158 102-282 27-205 (271)
181 2v1m_A Glutathione peroxidase; 97.6 5.1E-05 1.7E-09 65.7 4.5 33 371-403 30-62 (169)
182 4evm_A Thioredoxin family prot 97.6 5E-05 1.7E-09 62.4 4.3 31 371-401 21-51 (138)
183 2p5q_A Glutathione peroxidase 97.6 5.4E-05 1.9E-09 65.5 4.5 33 371-403 31-63 (170)
184 2p31_A CL683, glutathione pero 97.6 5.4E-05 1.8E-09 67.3 4.5 33 371-403 48-80 (181)
185 3dwv_A Glutathione peroxidase- 97.5 4.2E-05 1.4E-09 68.4 3.6 33 371-403 45-77 (187)
186 3gl3_A Putative thiol:disulfid 97.5 7.2E-05 2.5E-09 63.5 4.8 33 371-403 27-59 (152)
187 2lus_A Thioredoxion; CR-Trp16, 96.7 1.3E-05 4.5E-10 67.4 0.0 31 371-401 24-55 (143)
188 2l5o_A Putative thioredoxin; s 97.5 6.6E-05 2.3E-09 63.8 4.4 33 371-403 27-59 (153)
189 1kng_A Thiol:disulfide interch 97.5 5E-05 1.7E-09 64.7 3.7 29 371-399 41-69 (156)
190 3q4g_A NH(3)-dependent NAD(+) 97.5 0.00012 4.2E-09 70.5 6.7 156 102-275 29-211 (279)
191 3kcm_A Thioredoxin family prot 97.5 7.8E-05 2.7E-09 63.4 4.6 32 371-402 27-58 (154)
192 3dpi_A NAD+ synthetase; ssgcid 97.4 0.00023 7.7E-09 68.9 7.7 158 102-275 35-211 (285)
193 3kh7_A Thiol:disulfide interch 97.4 0.00011 3.9E-09 64.9 5.1 30 371-400 57-86 (176)
194 2lja_A Putative thiol-disulfid 97.4 6.7E-05 2.3E-09 63.7 3.5 32 371-402 29-60 (152)
195 1wxi_A NH(3)-dependent NAD(+) 97.4 0.00059 2E-08 65.6 10.4 152 102-275 28-202 (275)
196 2obi_A PHGPX, GPX-4, phospholi 97.4 0.0001 3.4E-09 65.4 4.5 33 371-403 46-78 (183)
197 1jfu_A Thiol:disulfide interch 97.4 0.00012 4E-09 64.8 4.9 32 371-402 59-90 (186)
198 2vup_A Glutathione peroxidase- 97.4 0.00011 3.6E-09 65.8 4.6 33 371-403 47-79 (190)
199 1un2_A DSBA, thiol-disulfide i 97.4 2E-05 6.9E-10 72.0 -0.2 31 372-402 113-146 (197)
200 3cmi_A Peroxiredoxin HYR1; thi 97.4 8.2E-05 2.8E-09 65.2 3.7 32 371-403 31-62 (171)
201 2ls5_A Uncharacterized protein 96.5 2.3E-05 7.9E-10 67.5 0.0 32 371-402 32-64 (159)
202 2gs3_A PHGPX, GPX-4, phospholi 97.4 0.00012 3.9E-09 65.3 4.5 33 371-403 48-80 (185)
203 2dlx_A UBX domain-containing p 97.4 0.00017 5.9E-09 63.3 5.4 51 343-394 13-64 (153)
204 2cvb_A Probable thiol-disulfid 97.4 0.00012 4.1E-09 64.9 4.2 32 371-402 32-63 (188)
205 3fw2_A Thiol-disulfide oxidore 97.3 0.00013 4.6E-09 62.1 4.3 31 371-401 32-64 (150)
206 3kp9_A Vkorc1/thioredoxin doma 97.3 3.8E-05 1.3E-09 74.5 0.8 27 375-401 200-226 (291)
207 1ttz_A Conserved hypothetical 97.3 9.9E-05 3.4E-09 58.6 2.7 23 376-398 3-25 (87)
208 2rli_A SCO2 protein homolog, m 97.3 0.0002 6.7E-09 62.1 4.5 33 371-403 25-58 (171)
209 1a8l_A Protein disulfide oxido 97.2 0.00016 5.4E-09 66.0 3.8 30 371-400 21-51 (226)
210 2ggt_A SCO1 protein homolog, m 97.2 0.00023 7.9E-09 61.1 4.5 33 371-403 22-55 (164)
211 2ywi_A Hypothetical conserved 97.2 0.00024 8.1E-09 63.2 4.7 33 371-403 44-77 (196)
212 2hyx_A Protein DIPZ; thioredox 97.2 0.00023 7.9E-09 70.8 4.9 33 371-403 81-113 (352)
213 2fgx_A Putative thioredoxin; N 97.2 0.00027 9.3E-09 58.4 4.1 29 373-401 29-57 (107)
214 1vbk_A Hypothetical protein PH 97.2 0.00074 2.5E-08 65.9 7.8 119 113-274 180-307 (307)
215 2k6v_A Putative cytochrome C o 97.2 0.00017 5.9E-09 62.4 2.9 32 371-402 34-66 (172)
216 2jsy_A Probable thiol peroxida 97.1 0.0003 1E-08 61.1 4.2 31 371-401 43-74 (167)
217 3rjz_A N-type ATP pyrophosphat 97.1 0.00044 1.5E-08 65.1 5.4 124 114-272 6-138 (237)
218 2b7k_A SCO1 protein; metalloch 97.1 0.00038 1.3E-08 62.9 4.5 34 371-404 40-74 (200)
219 3u5r_E Uncharacterized protein 97.1 0.00035 1.2E-08 64.1 4.3 33 371-403 57-90 (218)
220 2k8s_A Thioredoxin; dimer, str 97.1 0.00031 1.1E-08 53.8 3.3 26 375-400 3-28 (80)
221 3drn_A Peroxiredoxin, bacterio 97.0 0.00043 1.5E-08 59.9 4.4 33 371-403 27-61 (161)
222 1wjk_A C330018D20RIK protein; 97.0 0.00022 7.6E-09 57.6 2.2 27 371-397 14-40 (100)
223 1eej_A Thiol:disulfide interch 97.0 0.00036 1.2E-08 64.1 3.6 29 371-399 85-113 (216)
224 1xzo_A BSSCO, hypothetical pro 97.0 0.00043 1.5E-08 60.1 3.6 34 371-404 32-66 (174)
225 3hd5_A Thiol:disulfide interch 97.0 0.00028 9.6E-09 63.2 2.4 32 371-402 24-55 (195)
226 1we0_A Alkyl hydroperoxide red 96.9 0.0005 1.7E-08 61.1 3.6 33 371-403 30-63 (187)
227 1hyu_A AHPF, alkyl hydroperoxi 96.9 0.00063 2.2E-08 70.8 4.9 48 352-401 99-146 (521)
228 2i3y_A Epididymal secretory gl 96.9 0.00062 2.1E-08 62.9 4.3 32 371-403 55-86 (215)
229 1xvw_A Hypothetical protein RV 96.8 0.00038 1.3E-08 59.7 2.2 31 371-401 34-66 (160)
230 1ego_A Glutaredoxin; electron 96.8 0.00083 2.8E-08 51.4 3.9 25 376-400 3-27 (85)
231 2bmx_A Alkyl hydroperoxidase C 96.8 0.00057 1.9E-08 61.3 3.2 33 371-403 44-77 (195)
232 1zof_A Alkyl hydroperoxide-red 96.8 0.00053 1.8E-08 61.6 2.9 33 371-403 32-65 (198)
233 1qmv_A Human thioredoxin perox 96.7 0.00089 3E-08 60.1 4.0 33 371-403 33-66 (197)
234 1xvq_A Thiol peroxidase; thior 96.7 0.00071 2.4E-08 59.6 3.1 30 371-400 43-73 (175)
235 2r37_A Glutathione peroxidase 96.7 0.00093 3.2E-08 61.2 3.9 32 371-403 37-68 (207)
236 3uem_A Protein disulfide-isome 96.7 0.0009 3.1E-08 65.6 3.9 49 352-402 117-165 (361)
237 3gkn_A Bacterioferritin comigr 96.6 0.0017 5.8E-08 55.9 4.9 33 371-403 34-67 (163)
238 3ilv_A Glutamine-dependent NAD 96.6 0.008 2.7E-07 64.2 11.0 63 108-170 298-403 (634)
239 3hz8_A Thiol:disulfide interch 96.6 0.00058 2E-08 61.6 1.9 32 371-402 23-54 (193)
240 3h93_A Thiol:disulfide interch 96.6 0.0008 2.7E-08 60.0 2.4 32 371-402 24-55 (192)
241 1t3b_A Thiol:disulfide interch 96.5 0.0013 4.4E-08 60.2 3.6 29 371-399 85-113 (211)
242 2ywm_A Glutaredoxin-like prote 96.5 0.0018 6.3E-08 59.1 4.7 32 370-401 18-54 (229)
243 3sdb_A Glutamine-dependent NAD 96.5 0.0049 1.7E-07 66.4 8.6 69 102-170 350-427 (680)
244 1uul_A Tryparedoxin peroxidase 96.5 0.0017 5.9E-08 58.5 4.0 32 371-402 35-67 (202)
245 2h01_A 2-Cys peroxiredoxin; th 96.5 0.0012 4E-08 58.9 2.9 32 371-402 30-62 (192)
246 3ztl_A Thioredoxin peroxidase; 96.5 0.0017 5.7E-08 59.8 4.0 32 371-402 68-100 (222)
247 3gyk_A 27KDA outer membrane pr 96.5 0.0023 7.8E-08 56.0 4.7 32 371-402 21-52 (175)
248 1kte_A Thioltransferase; redox 96.4 0.0028 9.6E-08 50.7 4.7 23 375-397 13-35 (105)
249 2i81_A 2-Cys peroxiredoxin; st 96.4 0.0018 6.2E-08 59.3 3.9 32 371-402 51-83 (213)
250 1h75_A Glutaredoxin-like prote 96.4 0.0022 7.4E-08 48.7 3.5 22 376-397 3-24 (81)
251 1q98_A Thiol peroxidase, TPX; 96.4 0.0013 4.6E-08 57.2 2.4 31 371-401 42-73 (165)
252 1tp9_A Peroxiredoxin, PRX D (t 96.3 0.0035 1.2E-07 54.4 5.0 33 371-403 34-68 (162)
253 2c0d_A Thioredoxin peroxidase 96.3 0.0019 6.6E-08 59.6 3.5 33 371-403 55-88 (221)
254 2pn8_A Peroxiredoxin-4; thiore 96.3 0.0023 8E-08 58.4 4.0 32 371-402 47-79 (211)
255 1zye_A Thioredoxin-dependent p 96.3 0.0023 7.8E-08 58.8 3.9 33 371-403 55-88 (220)
256 2yzh_A Probable thiol peroxida 96.3 0.0014 4.7E-08 57.3 2.1 31 371-401 46-77 (171)
257 2cq9_A GLRX2 protein, glutared 96.3 0.0027 9.3E-08 53.6 3.7 23 374-397 28-50 (130)
258 1psq_A Probable thiol peroxida 96.3 0.0015 5.1E-08 56.7 2.1 31 371-401 41-72 (163)
259 3ixr_A Bacterioferritin comigr 96.2 0.003 1E-07 55.8 4.0 32 371-402 50-82 (179)
260 2a4v_A Peroxiredoxin DOT5; yea 96.2 0.0036 1.2E-07 53.8 4.4 31 372-402 35-66 (159)
261 1n8j_A AHPC, alkyl hydroperoxi 96.2 0.0037 1.3E-07 55.6 4.6 33 371-403 29-62 (186)
262 3feu_A Putative lipoprotein; a 96.2 0.0021 7.1E-08 57.6 2.8 30 372-401 22-51 (185)
263 2wfc_A Peroxiredoxin 5, PRDX5; 96.2 0.0038 1.3E-07 54.9 4.5 33 371-403 30-64 (167)
264 2hls_A Protein disulfide oxido 96.2 0.0034 1.2E-07 58.6 4.3 38 361-400 16-55 (243)
265 2pwj_A Mitochondrial peroxired 96.1 0.0027 9.4E-08 55.9 2.9 32 372-403 44-76 (171)
266 1nm3_A Protein HI0572; hybrid, 96.0 0.0054 1.8E-07 56.8 4.9 33 371-403 32-66 (241)
267 3me7_A Putative uncharacterize 95.9 0.0048 1.6E-07 54.1 3.7 32 371-402 27-59 (170)
268 1r7h_A NRDH-redoxin; thioredox 95.9 0.0047 1.6E-07 45.8 3.1 22 376-397 3-24 (75)
269 2ht9_A Glutaredoxin-2; thiored 95.9 0.0059 2E-07 52.8 4.1 23 374-397 50-72 (146)
270 4hde_A SCO1/SENC family lipopr 95.7 0.0091 3.1E-07 52.4 4.7 33 371-403 31-64 (170)
271 3rhb_A ATGRXC5, glutaredoxin-C 95.7 0.0053 1.8E-07 50.1 2.7 22 376-397 21-42 (113)
272 2hze_A Glutaredoxin-1; thiored 95.6 0.0047 1.6E-07 50.6 2.4 25 373-397 18-42 (114)
273 3p7x_A Probable thiol peroxida 95.6 0.0047 1.6E-07 53.6 2.4 30 371-400 45-75 (166)
274 3zrd_A Thiol peroxidase; oxido 95.5 0.0044 1.5E-07 56.1 2.0 31 371-401 77-108 (200)
275 2yan_A Glutaredoxin-3; oxidore 95.5 0.013 4.6E-07 47.1 4.5 23 374-397 18-45 (105)
276 4g2e_A Peroxiredoxin; redox pr 95.5 0.0014 4.8E-08 56.8 -1.6 31 371-401 29-60 (157)
277 3nzn_A Glutaredoxin; structura 95.4 0.01 3.5E-07 47.7 3.6 25 373-397 21-45 (103)
278 3c1r_A Glutaredoxin-1; oxidize 95.4 0.0068 2.3E-07 50.3 2.6 22 376-397 27-49 (118)
279 1v58_A Thiol:disulfide interch 95.4 0.013 4.4E-07 54.7 4.7 29 371-399 96-124 (241)
280 3uma_A Hypothetical peroxiredo 95.4 0.013 4.5E-07 52.4 4.5 31 372-402 56-88 (184)
281 3qpm_A Peroxiredoxin; oxidored 95.3 0.014 4.8E-07 54.4 4.5 32 371-402 76-108 (240)
282 2klx_A Glutaredoxin; thioredox 95.2 0.0094 3.2E-07 46.2 2.8 23 375-397 7-29 (89)
283 1jgt_A Beta-lactam synthetase; 95.2 0.063 2.1E-06 55.8 9.6 107 113-226 242-354 (513)
284 1ct9_A Asparagine synthetase B 95.2 0.15 5.2E-06 53.4 12.6 107 113-226 227-354 (553)
285 3mng_A Peroxiredoxin-5, mitoch 95.2 0.015 5E-07 51.6 4.1 32 371-402 42-75 (173)
286 2znm_A Thiol:disulfide interch 95.0 0.0051 1.8E-07 54.7 0.5 31 371-401 21-51 (195)
287 3qmx_A Glutaredoxin A, glutare 94.9 0.019 6.6E-07 46.0 3.9 27 371-397 13-39 (99)
288 1fov_A Glutaredoxin 3, GRX3; a 94.9 0.018 6.3E-07 43.3 3.6 22 376-397 3-24 (82)
289 1z6m_A Conserved hypothetical 94.7 0.032 1.1E-06 48.5 4.9 31 371-401 26-56 (175)
290 2khp_A Glutaredoxin; thioredox 94.5 0.025 8.7E-07 43.8 3.5 23 375-397 7-29 (92)
291 4gqc_A Thiol peroxidase, perox 94.5 0.0019 6.6E-08 56.6 -3.5 31 371-401 32-63 (164)
292 3tjj_A Peroxiredoxin-4; thiore 94.4 0.02 6.7E-07 54.0 3.0 32 371-402 90-122 (254)
293 3msz_A Glutaredoxin 1; alpha-b 94.2 0.027 9.4E-07 42.9 3.0 24 374-397 4-27 (89)
294 2rem_A Disulfide oxidoreductas 94.1 0.02 6.7E-07 50.6 2.3 31 371-401 24-54 (193)
295 3ic4_A Glutaredoxin (GRX-1); s 94.1 0.027 9.4E-07 43.6 2.8 22 376-397 14-35 (92)
296 1q15_A CARA; CMPR, (2S,5S)-5-c 94.0 0.13 4.6E-06 53.2 8.6 108 112-226 238-351 (503)
297 3h8q_A Thioredoxin reductase 3 93.8 0.033 1.1E-06 45.6 3.0 22 376-397 19-40 (114)
298 3a2v_A Probable peroxiredoxin; 93.4 0.038 1.3E-06 52.0 3.0 33 371-403 32-65 (249)
299 1prx_A HORF6; peroxiredoxin, h 93.4 0.074 2.5E-06 48.9 4.9 29 374-402 34-62 (224)
300 2v2g_A Peroxiredoxin 6; oxidor 93.3 0.059 2E-06 50.1 4.1 32 372-403 29-61 (233)
301 3ctg_A Glutaredoxin-2; reduced 93.3 0.04 1.4E-06 46.4 2.6 22 376-397 39-61 (129)
302 3l9s_A Thiol:disulfide interch 93.1 0.03 1E-06 50.2 1.7 31 372-402 21-54 (191)
303 1wik_A Thioredoxin-like protei 92.5 0.11 3.8E-06 42.0 4.1 33 360-397 6-43 (109)
304 1xcc_A 1-Cys peroxiredoxin; un 92.1 0.074 2.5E-06 48.8 3.0 29 374-402 34-62 (220)
305 3l4n_A Monothiol glutaredoxin- 91.7 0.16 5.4E-06 42.8 4.3 32 361-397 6-37 (127)
306 2lqo_A Putative glutaredoxin R 90.3 0.16 5.5E-06 40.2 2.9 23 375-397 5-27 (92)
307 3gv1_A Disulfide interchange p 90.2 0.16 5.4E-06 43.8 3.0 27 371-397 13-39 (147)
308 4dvc_A Thiol:disulfide interch 90.2 0.29 9.8E-06 42.3 4.7 33 371-403 20-52 (184)
309 4f4h_A Glutamine dependent NAD 90.1 0.61 2.1E-05 48.9 8.0 66 105-170 292-361 (565)
310 4f82_A Thioredoxin reductase; 88.1 0.58 2E-05 41.6 5.2 31 372-402 48-79 (176)
311 4f9z_D Endoplasmic reticulum r 87.3 0.59 2E-05 42.5 4.9 48 352-401 113-160 (227)
312 3keb_A Probable thiol peroxida 86.5 0.29 9.8E-06 45.4 2.3 27 371-397 47-79 (224)
313 3gx8_A Monothiol glutaredoxin- 82.7 0.84 2.9E-05 37.7 3.3 16 382-397 29-44 (121)
314 2l4c_A Endoplasmic reticulum r 82.5 1.3 4.4E-05 36.8 4.4 38 358-401 28-65 (124)
315 4f9z_D Endoplasmic reticulum r 81.9 0.72 2.5E-05 41.9 2.8 44 352-401 9-53 (227)
316 3sbc_A Peroxiredoxin TSA1; alp 81.6 1.2 4.3E-05 40.8 4.3 32 371-402 51-83 (216)
317 3ipz_A Monothiol glutaredoxin- 81.4 1.1 3.8E-05 36.0 3.5 16 382-397 31-46 (109)
318 1aba_A Glutaredoxin; electron 80.0 1.4 4.8E-05 33.5 3.5 22 376-397 2-27 (87)
319 1nm3_A Protein HI0572; hybrid, 79.7 2 6.8E-05 39.1 5.1 25 373-397 169-193 (241)
320 3tdg_A DSBG, putative uncharac 79.4 1.4 4.8E-05 41.9 4.0 29 371-399 146-174 (273)
321 3zyw_A Glutaredoxin-3; metal b 76.5 1.7 5.8E-05 35.2 3.2 25 372-397 15-44 (111)
322 2wci_A Glutaredoxin-4; redox-a 76.0 1.3 4.3E-05 37.6 2.3 24 374-397 36-63 (135)
323 3gha_A Disulfide bond formatio 74.3 2.6 9.1E-05 37.6 4.2 25 371-395 28-52 (202)
324 3f4s_A Alpha-DSBA1, putative u 72.2 3.5 0.00012 37.7 4.5 31 371-401 38-69 (226)
325 2wem_A Glutaredoxin-related pr 72.1 2.2 7.6E-05 35.1 2.8 16 382-397 33-48 (118)
326 1t1v_A SH3BGRL3, SH3 domain-bi 69.3 2.9 0.0001 32.2 2.8 21 376-396 4-30 (93)
327 2ct6_A SH3 domain-binding glut 69.0 2.9 9.8E-05 33.7 2.8 22 375-396 9-36 (111)
328 1sji_A Calsequestrin 2, calseq 65.9 10 0.00034 36.4 6.5 48 352-401 226-274 (350)
329 3tue_A Tryparedoxin peroxidase 61.9 3.6 0.00012 37.8 2.3 32 371-402 55-87 (219)
330 1rw1_A Conserved hypothetical 61.9 5.9 0.0002 32.0 3.4 21 376-396 2-22 (114)
331 2kok_A Arsenate reductase; bru 60.4 6.8 0.00023 31.9 3.6 22 376-397 7-28 (120)
332 2ec4_A FAS-associated factor 1 59.1 7.3 0.00025 34.4 3.7 33 359-391 37-74 (178)
333 2axo_A Hypothetical protein AT 57.9 8.6 0.00029 36.4 4.2 28 373-400 43-70 (270)
334 1xiy_A Peroxiredoxin, pfaop; a 56.5 9.1 0.00031 33.7 3.9 31 371-401 42-74 (182)
335 3l78_A Regulatory protein SPX; 52.8 10 0.00035 31.0 3.4 22 376-397 2-23 (120)
336 4eo3_A Bacterioferritin comigr 50.1 11 0.00038 36.2 3.7 26 371-396 23-49 (322)
337 2jad_A Yellow fluorescent prot 47.0 11 0.00037 37.3 3.0 21 376-396 263-284 (362)
338 3fz4_A Putative arsenate reduc 45.2 17 0.00058 29.7 3.6 22 376-397 5-26 (120)
339 2h8l_A Protein disulfide-isome 44.2 28 0.00095 31.6 5.3 44 352-401 6-50 (252)
340 2xhf_A Peroxiredoxin 5; oxidor 41.6 16 0.00054 31.9 3.0 32 371-402 41-73 (171)
341 2d8c_A Phosphatidylcholine:cer 39.8 13 0.00045 29.5 2.0 22 254-275 14-35 (97)
342 3gkx_A Putative ARSC family re 39.2 18 0.00063 29.5 2.9 21 376-396 6-26 (120)
343 2gle_A Neurabin-1; SAM domain, 38.6 9.4 0.00032 28.3 0.9 21 255-275 2-22 (74)
344 3us3_A Calsequestrin-1; calciu 37.4 51 0.0017 31.8 6.3 50 352-402 228-277 (367)
345 3ec3_A Protein disulfide-isome 35.0 39 0.0013 30.6 4.7 44 352-401 6-51 (250)
346 3bs7_A Protein aveugle; sterIl 33.5 11 0.00039 28.1 0.6 18 255-272 1-18 (78)
347 2wul_A Glutaredoxin related pr 32.7 25 0.00085 28.8 2.7 16 381-396 32-47 (118)
348 3rdw_A Putative arsenate reduc 32.0 21 0.00072 29.2 2.1 21 376-396 7-27 (121)
349 1kw4_A Polyhomeotic; SAM domai 30.7 22 0.00075 27.6 1.9 20 255-274 12-32 (89)
350 3bq7_A Diacylglycerol kinase d 29.2 25 0.00085 26.5 1.9 27 254-280 4-31 (81)
351 3f0i_A Arsenate reductase; str 29.0 31 0.001 28.0 2.6 21 376-396 6-26 (119)
352 3f6p_A Transcriptional regulat 28.6 1.9E+02 0.0065 21.8 8.3 66 102-172 16-81 (120)
353 3jte_A Response regulator rece 27.1 2.2E+02 0.0074 22.0 8.6 70 101-173 16-86 (143)
354 3hzh_A Chemotaxis response reg 25.2 1.9E+02 0.0065 23.1 7.1 70 102-173 50-120 (157)
355 2yci_X 5-methyltetrahydrofolat 23.9 1.6E+02 0.0056 27.4 7.0 75 99-173 86-171 (271)
356 1v85_A Similar to ring finger 23.5 29 0.00098 26.9 1.3 22 253-274 13-34 (91)
357 1vb5_A Translation initiation 22.9 4.5E+02 0.015 24.2 9.9 65 103-171 99-167 (276)
358 2e8o_A SAM domain and HD domai 22.0 33 0.0011 27.1 1.5 22 254-275 24-45 (103)
359 3bs5_B Connector enhancer of k 21.4 43 0.0015 24.9 1.9 19 255-273 2-20 (80)
360 1f6y_A 5-methyltetrahydrofolat 20.0 2.2E+02 0.0074 26.3 6.9 67 100-166 78-153 (262)
No 1
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=100.00 E-value=3e-62 Score=475.77 Aligned_cols=239 Identities=52% Similarity=1.049 Sum_probs=200.4
Q ss_pred hhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh
Q 015013 85 EEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF 163 (414)
Q Consensus 85 ~~~~~~l~~~l~~~~a~eil~~a~~~~~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~ 163 (414)
..+++.+|++|+.++++++|+++++.|+++|+|+|| ||||++| ||+.+.++++.|+|+|||++||||++|+++++++|
T Consensus 27 ~~~~~~~~~~~~~~~a~~~l~~a~~~~g~~i~Va~S-GkDS~vLL~Ll~~~~~~i~vv~iDtg~~~~et~~~v~~~~~~~ 105 (275)
T 2goy_A 27 PFDLPALASSLADKSPQDILKAAFEHFGDELWISFS-GAEDVVLVDMAWKLNRNVKVFSLDTGRLHPETYRFIDQVREHY 105 (275)
T ss_dssp -CCHHHHHHHHTTSCHHHHHHHHHHHHSTTEEEECC-SSTTHHHHHHHHHHCTTCCEEEECCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEee-cHHHHHHHHHHHHhCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999878999999 9999875 99999999999999999999999999999999999
Q ss_pred CCcEEEEcCChHHHHHHHHhcCCCCCCcccchhhhcchhchhHHHHhccCcEEEecccccCCccCcCCCCceecCCCCcc
Q 015013 164 GIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEG 243 (414)
Q Consensus 164 gl~i~~~~P~~~~~~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~ 243 (414)
|++++++.|+...++++...+|.+.++..++++||.++|++||+++++++++|++|+|++|++..|+.++.++.|+.+.
T Consensus 106 gi~l~v~~~~~~~~~~~~~~~g~~~~~~~~~~~cc~~~K~~pl~r~l~~~~~~itG~r~dds~~~R~~~~~~~~d~~~~- 184 (275)
T 2goy_A 106 GIAIDVLSPDPRLLEPLVKEKGLFSFYRDGHGECCGIRKIEPLKRKLAGVRAWATGQRRDQSPGTRSQVAVLEIDGAFS- 184 (275)
T ss_dssp TCCCEEECCCHHHHHHHHHHHCSCHHHHHCTHHHHHHHTHHHHHHHHHTCSEEECCCCGGGTTSCSCCCCSEEECTTTC-
T ss_pred CCeEEEEeCCccCHHHHHHHhCCCCccccCHHHHHHHHHHHHHHHHHHhcCchhcCchhhhhhhhhhhCcccccccccc-
Confidence 9999999998655556666778766666667899999999999999999999999999999922899999998875332
Q ss_pred ccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhCCCCCCCCccCCCCCCCCCcccccccccCCCCccceeccCCC
Q 015013 244 LEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKECGLHKGN 323 (414)
Q Consensus 244 ~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~SiGC~~CT~~v~~g~~~R~GRW~w~~~~k~ECGlh~~~ 323 (414)
. ..+++++++||++||++|||.|++.++|||||||++||+||||++||+++.+|+|+|+|||||+|..|||||||..+
T Consensus 185 ~--~~~g~~~i~PL~~wt~~dV~~Yi~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~R~gRw~w~~~~k~ecGlh~~~ 262 (275)
T 2goy_A 185 T--PEKPLYKFNPLSSMTSEEVWGYIRMLELPYNSLHERGYISIGCEPCTRPVLPNQHEREGRWWWEEATHKECGLHAGN 262 (275)
T ss_dssp C--SSSCCEEECTTTTCCHHHHHHHHHHTTCCCCGGGGGTCSSCCCGGGBCCCCTTCCGGGGBSTTC-------------
T ss_pred c--CCCCeEEEechHhCCHHHHHHHHHHhCCCCChHHHcCCCCCCCccCCCCCCCCCccccCccccCCCCCccCCCCcCc
Confidence 0 12468899999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred cccc
Q 015013 324 IKQE 327 (414)
Q Consensus 324 ~~~~ 327 (414)
+..+
T Consensus 263 ~~~~ 266 (275)
T 2goy_A 263 LISK 266 (275)
T ss_dssp ----
T ss_pred chhh
Confidence 7543
No 2
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-58 Score=446.08 Aligned_cols=224 Identities=27% Similarity=0.450 Sum_probs=195.3
Q ss_pred hhHHHHHHHhccC-CHHHHHHHHHHHcCCcEEEEechHHHHHHH-HHHHhcCC---CeEEEEEeCCCCcHHHHHHHHHHH
Q 015013 86 EDFEQFAKELENA-SPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGR---PFRVFSLDTGRLNPETYRFFDEVE 160 (414)
Q Consensus 86 ~~~~~l~~~l~~~-~a~eil~~a~~~~~~~i~vafSGGKDSvlL-~L~~~~~~---~i~VvflDTG~~fpET~~~v~~l~ 160 (414)
.+++.+|++|+.+ +++++|+|+++.|+ +++|+|||||||++| ||+.+..+ +++|+|+|||++||||++|+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~l~~a~~~~~-~v~va~SGGkDS~vLL~ll~~~~~~~~~i~vv~iDtg~~~~et~~~v~~~~ 93 (261)
T 2oq2_A 15 EQLDHWNEQLIKLETPQEIIAWSIVTFP-HLFQTTAFGLTGLVTIDMLSKLSEKYYMPELLFIDTLHHFPQTLTLKNEIE 93 (261)
T ss_dssp HHHHHHHHHHTTCCSHHHHHHHHHHHCS-SEEEECCCCHHHHHHHHHHHHHTTTSCCCEEEEECCSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCHHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHhCccCCCeeEEEecCCCCCHHHHHHHHHHH
Confidence 4678999999999 99999999999997 699999999999875 99999876 899999999999999999999999
Q ss_pred HHhCC----cEEEEcCChH-HHHHHHHhcCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCC
Q 015013 161 KHFGI----RIEYMFPDAV-EVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIP 233 (414)
Q Consensus 161 ~~~gl----~i~~~~P~~~-~~~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~ 233 (414)
++||+ +++++.|+.. .+.++...+|.. ++..++.+||.++|++||+++++ ++++|++|+|+||+. +|+.++
T Consensus 94 ~~~gl~~~~~l~v~~~~~~~~~~~~~~~~G~~-~~~~~~~~cc~~~K~~pl~~~l~~~g~~~~~tG~R~dds~-~R~~~~ 171 (261)
T 2oq2_A 94 KKYYQPKNQTIHVYKPDGCESEADFASKYGDF-LWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQGS-ARSQLS 171 (261)
T ss_dssp HHHTGGGTCCCEEECSTTCSSHHHHHHHHCTT-HHHHCHHHHHHHHTHHHHHHHHHHTTCSEEECCCCGGGCG-GGGGCC
T ss_pred HHhCCCCCCCeEEEecCCccCHHHHHHHhCCC-ccccChHHHHHHHhHHHHHHHHHHcCCCEEEEeccccchH-HHccCC
Confidence 99999 9999998741 133445556643 34555689999999999999998 557999999999996 999999
Q ss_pred ceecCCCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhCCCCCCCCccCCCCCCCCCcccccccccCCCC
Q 015013 234 VVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAK 313 (414)
Q Consensus 234 ~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~SiGC~~CT~~v~~g~~~R~GRW~w~~~~ 313 (414)
.+++++ +++.++++||++||++|||.|++.++|||||||++||+||||++||+++.+|+++|+||| +|..
T Consensus 172 ~~~~~~--------~~~~~ki~PL~~wt~~dV~~Yi~~~~lp~~pLy~~Gy~siGC~~ct~~~~~~~~eR~gRw--~~~~ 241 (261)
T 2oq2_A 172 IIEIDE--------LNGILKINPLINWTFEQVKQYIDANNVPYNELLDLGYRSIGDYHSTQPVKEGEDERAGRW--KGKA 241 (261)
T ss_dssp SEEEET--------TTTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCBGGGCCCCCTTSCTTTTTC------
T ss_pred ceeecC--------CCCeEEEechHhCCHHHHHHHHHHcCCCCCchhhCCCCCCCCcCCCCcCCCCCCcccccc--CCCC
Confidence 888774 146889999999999999999999999999999999999999999999999999999997 7888
Q ss_pred ccceeccCC
Q 015013 314 AKECGLHKG 322 (414)
Q Consensus 314 k~ECGlh~~ 322 (414)
|||||||..
T Consensus 242 k~ecGlh~~ 250 (261)
T 2oq2_A 242 KTECGIHEA 250 (261)
T ss_dssp -CCCTTTCC
T ss_pred CcccCCCCC
Confidence 999999963
No 3
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=100.00 E-value=1.5e-57 Score=437.42 Aligned_cols=227 Identities=26% Similarity=0.433 Sum_probs=185.1
Q ss_pred cChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHH
Q 015013 83 EGEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEK 161 (414)
Q Consensus 83 ~~~~~~~~l~~~l~~~~a~eil~~a~~~~~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~ 161 (414)
++..+++.+|++|+.++++++|+|+++.|+++++|+||||+||++| ||+.+..+++.++|+|||.+||||++|++++++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~v~va~SGG~DS~vLL~ll~~~~~~v~vv~idtg~~~~et~~~~~~~~~ 95 (252)
T 2o8v_A 16 DRILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTD 95 (252)
T ss_dssp HHHHHTHHHHHHHTTSCHHHHHHHHHTTSCSCEEEECCCSTTHHHHHHHHHHHSTTCEEEECCCSCBCHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHhcCCCHHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCCeEEEecCCCCCHHHHHHHHHHHH
Confidence 3456788999999999999999999999988899999999999875 999999999999999999999999999999999
Q ss_pred HhCCcEEEEcCChHHHHHHHHhcCCCCCCc--ccchhhhcchhchhHHHHhccCc--EEEecccccCCccCcCCCCceec
Q 015013 162 HFGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQV 237 (414)
Q Consensus 162 ~~gl~i~~~~P~~~~~~~~~~~~G~~~~~~--~~~~~Cc~~~Kv~Pl~ral~~~~--~~itGiRrdES~~~Ra~~~~~e~ 237 (414)
+||++++++.|+.. ...+...+| ..+.. ..+.+||.++|++||+++++++. +|++|+|++|+. .|+.++.++.
T Consensus 96 ~~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~cc~~~K~~pl~~~l~~~~~~~~~tG~r~dds~-~R~~l~~~~~ 172 (252)
T 2o8v_A 96 KLKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAI 172 (252)
T ss_dssp HTTCEEEECCCSSC-HHHHHHHTC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTCSEEEECCCSTTTT-CCTTSCSEEE
T ss_pred HhCCceEEEcCCCC-HHHHHHHcC-CccccCCchHHHHHHHHHHHHHHHHHHhcCCcEEEEeccccccc-ccccCceeec
Confidence 99999999988864 334455566 32322 13468999999999999998764 699999999997 9999887753
Q ss_pred CCCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhCCCCCCCCccCCCCCCCCCcccccccccCCCCccce
Q 015013 238 DPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLPGQHEREGRWWWEDAKAKEC 317 (414)
Q Consensus 238 d~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~SiGC~~CT~~v~~g~~~R~GRW~w~~~~k~EC 317 (414)
. ++..+++||++|+.+|||.|++.++|||||||++||+||||++||+++.+|+|+|+||| +| .||||
T Consensus 173 ~----------~~~~~i~PL~~wt~~dV~~y~~~~~lp~~~Ly~~Gy~siGC~~Ct~~~~~g~~~r~gRw--~~-~k~ec 239 (252)
T 2o8v_A 173 Q----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTTRKWEPGMAEEETRF--FG-LKREC 239 (252)
T ss_dssp S----------SSSEEECGGGSCCHHHHHHHHHHTTCCCCTTTTTTCSSCCBCTTTCC-----------------CCSCC
T ss_pred C----------CCeEEEechhhCCHHHHHHHHHHcCCCCChHHhCCCCCCCCcCcCCcCCCCCCcccccc--CC-CCccC
Confidence 2 24789999999999999999999999999999999999999999999999999999998 66 89999
Q ss_pred eccCCCcc
Q 015013 318 GLHKGNIK 325 (414)
Q Consensus 318 Glh~~~~~ 325 (414)
|||.....
T Consensus 240 glh~~~~~ 247 (252)
T 2o8v_A 240 GLHEGLEH 247 (252)
T ss_dssp CSCCC---
T ss_pred CCCCCccc
Confidence 99987554
No 4
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=100.00 E-value=3e-45 Score=357.67 Aligned_cols=180 Identities=17% Similarity=0.259 Sum_probs=152.9
Q ss_pred hHHHHHHHhccCCHHHHHHHHHHHcC---CcEEEEechHHHHHHH-HHHHhc----------------------CCCeEE
Q 015013 87 DFEQFAKELENASPLEIMDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRV 140 (414)
Q Consensus 87 ~~~~l~~~l~~~~a~eil~~a~~~~~---~~i~vafSGGKDSvlL-~L~~~~----------------------~~~i~V 140 (414)
.+..+..+++. +..++|++++++|+ ++++++|||||||+|| ||+.+. .++++|
T Consensus 31 ~~~~~q~qir~-S~~~iLrea~~~f~~~~~~ialSfSGGKDStVLLhL~~kal~~~~~~~~~~~~~~~~~~~~p~~~ipv 109 (308)
T 3fwk_A 31 IIAQTQRAINT-TKSILINETFPKWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYYIVKLSQSQFDGKFHRFPLTKLPT 109 (308)
T ss_dssp HHHHHHHHHHH-HHHHHHHHTTTTSCSSSSSEEEECCSSHHHHHHHHHHHHHHHHHHTCCE-----------------EE
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHcccccCCEEEEecCChhHHHHHHHHHHHhhhhcccccccccccccccccCCCCccE
Confidence 46677777764 44579999999997 5899999999999875 988774 157999
Q ss_pred EEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCcccchhhhcchhchhHHHHhccCcEEEecc
Q 015013 141 FSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQ 220 (414)
Q Consensus 141 vflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~~~~~~itGi 220 (414)
||+|||++|||||+|++++.++||++|+++.|+... ...++||.++|++| ++++||+|+
T Consensus 110 ifiDTG~~FpET~ef~d~~~~~ygL~L~v~~p~~~~---------------~~~~~cc~~~K~~P------~~~AwitG~ 168 (308)
T 3fwk_A 110 VFIDHDDTFKTLENFIEETSLRYSLSLYESDRDKCE---------------TMAEAFETFLQVFP------ETKAIVIGI 168 (308)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHTTEEEEECCTTSCC---------------CHHHHHHHHHHHCT------TCCEEECCC
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhCCcEEEeCCCCCH---------------HHHHHHHHHHHhCC------CCCEEEEEe
Confidence 999999999999999999999999999998886321 02358999999999 489999999
Q ss_pred cccCCccCcCCCCceecCCCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhCCCCCCCCccCCCCC
Q 015013 221 RKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPV 296 (414)
Q Consensus 221 RrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~SiGC~~CT~~v 296 (414)
||++ + +|++++.++.+. .++++++|+|||++||..|||.||+.|+|||||||++||+||||+|||+|.
T Consensus 169 RR~e-~-~Ra~l~~~e~~d------~~w~~~iKVnPL~dWT~~DVW~YI~~~~LPynpLYd~GY~SIGC~~CT~pn 236 (308)
T 3fwk_A 169 RHTD-P-FGEHLKPIQKTD------ANWPDFYRLQPLLHWNLANIWSFLLYSNEPICELYRYGFTSLGNVEETLPN 236 (308)
T ss_dssp CTTS-T-TCTTCCSEEECC------TTSCSCEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSSCCCTTTBCCC
T ss_pred ecCC-c-ccCCCCeeeccC------CCCCCeEEEechhhCCHHHHHHHHHHcCCCCCcHHhcCCCCCCCCccCCCC
Confidence 9996 5 899999887642 134679999999999999999999999999999999999999999999985
No 5
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=100.00 E-value=5.8e-42 Score=340.26 Aligned_cols=200 Identities=26% Similarity=0.421 Sum_probs=137.7
Q ss_pred CHHHHHHHHHHHcCCcEEEEechHHHHHHH-HHHHhc----CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCC
Q 015013 99 SPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLT----GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPD 173 (414)
Q Consensus 99 ~a~eil~~a~~~~~~~i~vafSGGKDSvlL-~L~~~~----~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~ 173 (414)
.++++|+++++.|+ +++|+|||||||++| ||+.+. +.+++++|+|||.+||||++|+++++++||++++++.|+
T Consensus 34 ~a~~ilr~~~~~~~-~ivVa~SGGkDS~vLL~Ll~~~~~~~~~~i~vv~vDtg~~~~et~~~v~~~~~~~gi~l~v~~~~ 112 (325)
T 1zun_A 34 ESIHIIREVAAEFD-NPVMLYSIGKDSAVMLHLARKAFFPGKLPFPVMHVDTRWKFQEMYRFRDQMVEEMGLDLITHINP 112 (325)
T ss_dssp HHHHHHHHHHHHCS-SEEEECCSSHHHHHHHHHHHHHHTTSCCSSCEEEECCSCCCHHHHHHHHHHHHTTTCCEEEECC-
T ss_pred HHHHHHHHHHHhCC-CEEEEEcChHHHHHHHHHHHHhccccCCCEEEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCc
Confidence 48899999999986 699999999999875 998886 568999999999999999999999999999999999876
Q ss_pred hHHHHHHHHhcCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCcee-------cCCCCcc-
Q 015013 174 AVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQ-------VDPVFEG- 243 (414)
Q Consensus 174 ~~~~~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e-------~d~~~~~- 243 (414)
.. ..+|.+.+ ..++++||.++|++||+++++ ++++|++|+|+||+. +|+.+++++ |++....
T Consensus 113 ~~------~~~G~~~~-~~~~~~cc~~~K~~pL~~~l~e~g~~~i~tG~R~Des~-~Ra~~~~~~~r~~~~~~d~~~~rp 184 (325)
T 1zun_A 113 DG------VAQGINPF-THGSAKHTDIMKTEGLKQALDKHGFDAAFGGARRDEEK-SRAKERVYSFRDSKHRWDPKNQRP 184 (325)
T ss_dssp --------------------CCHHHHHHTHHHHHHHHHHHTCSEEECCCCTTSSG-GGGGCCSEEEECTTCCBCGGGCCC
T ss_pred hH------HhcCCCcc-ccChHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhh-hhhcccceeccccccccCccccCc
Confidence 43 12344333 335568999999999999998 678999999999996 999888775 3331100
Q ss_pred -------ccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhh-------------------hCC--------------
Q 015013 244 -------LEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLH-------------------SQG-------------- 283 (414)
Q Consensus 244 -------~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLY-------------------d~G-------------- 283 (414)
.....++.++++||++||++|||.|++.++||||||| ++|
T Consensus 185 ~l~~~~n~~~~~g~~~~i~PLl~wt~~dIw~Yi~~~~lp~~~LY~~~~r~~~~r~g~~~~~~~~~g~~~~~~~~~~~~~~ 264 (325)
T 1zun_A 185 ELWNVYNGNVNKGESIRVFPLSNWTELDIWQYIYLEGIPIVPLYFAAERDVIEKNGTLIMIDDERILEHLTDEEKSRIVK 264 (325)
T ss_dssp CCSSCCCCCCCTTCEEEECTTTTCCHHHHHHHHHHHTCCCCSCCSCC---------------------------------
T ss_pred chhhhccccccCCCeEEEEchhhCCHHHHHHHHHHhCCCcchhhhcccccccccCCceeccchhhcccccCCCccccccc
Confidence 0001134789999999999999999999999999999 699
Q ss_pred ----CCCCCCccCCCCCCCCCc---------------cccccc
Q 015013 284 ----YISIGCEPCTRPVLPGQH---------------EREGRW 307 (414)
Q Consensus 284 ----y~SiGC~~CT~~v~~g~~---------------~R~GRW 307 (414)
|+||||+|||.++.+|++ ||.|||
T Consensus 265 ~~~ry~siGc~~cT~~v~~~~~~~~~~~~~~~~~~~~er~~R~ 307 (325)
T 1zun_A 265 KKVRFRTLGCYPLTGAVESEATSLTDIIQEMLLTRTSERQGRV 307 (325)
T ss_dssp -------------------------------------------
T ss_pred cccccCCcCCcccCCccCCCCccHHHHHHHHHhcCCCcccccc
Confidence 999999999999988753 899997
No 6
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=100.00 E-value=3.6e-40 Score=308.45 Aligned_cols=195 Identities=24% Similarity=0.399 Sum_probs=168.4
Q ss_pred ChhhHHHHHHHhccCCHHHHHHHHHHHcCCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHH
Q 015013 84 GEEDFEQFAKELENASPLEIMDRALEKFGNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKH 162 (414)
Q Consensus 84 ~~~~~~~l~~~l~~~~a~eil~~a~~~~~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~ 162 (414)
+..+++.+|++|+.++++++|+++++.|+++|+|+|||||||++| ||+.+.+.++.++|+|||.++|+|++|+++++++
T Consensus 16 ~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~v~Va~SGGkDS~vLL~ll~~~~~~v~~v~vd~g~~~~e~~~~v~~~~~~ 95 (215)
T 1sur_A 16 RILALAETNAELEKLDAEGRVAWALDNLPGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDK 95 (215)
T ss_dssp HHHHHHHHHHHHTTSCHHHHHHHHHHHCCSEEEEECCCCTTHHHHHHHHHHHSTTCEEEEEECSCBCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhccCCHHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCCeEEEeeCCCCCHHHHHHHHHHHHH
Confidence 346889999999999999999999999988899999999999875 9999988999999999999999999999999999
Q ss_pred hCCcEEEEcCChHHHHHHHHhcCCCCCCc--ccchhhhcchhchhHHHHhccCc--EEEecccccCCccCcCCCCceecC
Q 015013 163 FGIRIEYMFPDAVEVQALVRSKGLFSFYE--DGHQECCRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVD 238 (414)
Q Consensus 163 ~gl~i~~~~P~~~~~~~~~~~~G~~~~~~--~~~~~Cc~~~Kv~Pl~ral~~~~--~~itGiRrdES~~~Ra~~~~~e~d 238 (414)
||++++++.|+.. ....+...| ..+.. ..+.+||.++|+.||.+++++.. +|++|+|++|+. .|..++.++..
T Consensus 96 ~gi~~~v~~~~~~-~~~~~~~~g-~~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~i~~G~r~dd~~-~r~~~~~~~~~ 172 (215)
T 1sur_A 96 LKLNLKVYRATES-AAWQEARYG-KLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQSG-SRANLPVLAIQ 172 (215)
T ss_dssp TTCEEEEEECSSC-HHHHHHHHC-CGGGSHHHHHHHHHHHHTHHHHHHHHHHTTEEEEECCCCTTSSS-TTTTCCSEEEE
T ss_pred hCCcEEEEeCCCC-HHHHHHhcC-CCCCCCccHHHHHHHHHHHHHHHHHHHhcCCceEEEEeehhhhh-hhcCCCccccC
Confidence 9999999988754 233444455 22221 12468999999999999998664 799999999996 89888776421
Q ss_pred CCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhCCCCCCCCcc
Q 015013 239 PVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEP 291 (414)
Q Consensus 239 ~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~SiGC~~ 291 (414)
++..+++||++|+++|||.|++.++|||||||++||+||||+|
T Consensus 173 ----------~~~~~i~PLl~~t~~dI~~y~~~~~lp~~~lY~~Gy~siGC~p 215 (215)
T 1sur_A 173 ----------RGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTH 215 (215)
T ss_dssp ----------TTEEEECTTTTCCHHHHHHHHHHHTCCCCGGGGGTCSCCCBCC
T ss_pred ----------CCEEEEechHhCCHHHHHHHHHHhCCCCChHHhCCCCCCCCCC
Confidence 2467899999999999999999999999999999999999987
No 7
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-39 Score=319.05 Aligned_cols=185 Identities=16% Similarity=0.265 Sum_probs=146.4
Q ss_pred HHH-HHHHHHHHcC---CcEEEEechHHHHHHH-HHHHhc----------------------CCCeEEEEEeCCCCcHHH
Q 015013 100 PLE-IMDRALEKFG---NDIAIAFSGAEDVALI-EYAHLT----------------------GRPFRVFSLDTGRLNPET 152 (414)
Q Consensus 100 a~e-il~~a~~~~~---~~i~vafSGGKDSvlL-~L~~~~----------------------~~~i~VvflDTG~~fpET 152 (414)
.++ +|+++++.|+ ++++|+|||||||+|| ||+.+. +++++++|+|||.+||||
T Consensus 37 ~~~~il~~~~~~~~~~~~~i~vafSGGKDS~VLL~L~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~vv~iDtg~~fpet 116 (306)
T 2wsi_A 37 TRKYLLSEIFVRWSPLNGEISFSYNGGKDCQVLLLLYLSCLWEYFFIKAQNSQFDFEFQSFPMQRLPTVFIDQEETFPTL 116 (306)
T ss_dssp HHHHHHHTTTTTSCSSSSSEEEECCSCHHHHHHHHHHHHHHHHHHHHHHHHC--------CCCCCEEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHHHcccccCCEEEEecCCHHHHHHHHHHHHHHhhhcccccccccccccccccCCCCeeEEEEeCCCCCHHH
Confidence 344 8888888887 5899999999999875 888764 467999999999999999
Q ss_pred HHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCCCcccchhhhcchhchhHHHHhccCcEEEecccccCCccCcCCC
Q 015013 153 YRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGTRSEI 232 (414)
Q Consensus 153 ~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~~~~~~itGiRrdES~~~Ra~~ 232 (414)
++|+++++++||++++++.|+... + ..++ ..+...+|++|+ .+++++|+|++|+. .|+..
T Consensus 117 ~~fv~~~~~~ygl~l~v~~~~~~~--------~-~~l~----~~~~~~~k~~p~------~~aii~G~Rrdds~-~r~l~ 176 (306)
T 2wsi_A 117 ENFVLETSERYCLSLYESQRQSGA--------S-VNMA----DAFRDFIKIYPE------TEAIVIGIRHTDPF-GEALK 176 (306)
T ss_dssp HHHHHHHHHHTTEEEEECCC--------------CCHH----HHHHHHHHHCTT------CCEEECCCCCCSSS-CCCCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCccc--------c-ccHH----HHHHHHHhhCCC------CcEEEEEEeccccc-ccccC
Confidence 999999999999999988776321 0 0111 122334466664 46899999999996 77554
Q ss_pred CceecCCCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhCCCCCCCCccCCCCCCC---CCccccccccc
Q 015013 233 PVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQGYISIGCEPCTRPVLP---GQHEREGRWWW 309 (414)
Q Consensus 233 ~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~SiGC~~CT~~v~~---g~~~R~GRW~w 309 (414)
.....|+ ++++++|++||++||++|||.||+.++|||||||++||+||||++||+|... +++.+.+||||
T Consensus 177 ~~~~~d~-------~~p~~~ri~PL~dWt~~DVw~Yi~~~~lpy~pLYd~GY~SiGc~~cT~pnp~l~~~~~~~~~~~~w 249 (306)
T 2wsi_A 177 PIQRTDS-------NWPDFMRLQPLLHWDLTNIWSFLLYSNEPICGLYGKGFTSIGGINNSLPNPHLRKDSNNPALHFEW 249 (306)
T ss_dssp SEEECCT-------TSCSCEEECTTTTCCHHHHHHHHHHHCCCBCHHHHTTCSSCCCTTTBCSCGGGBGGGCCCCCSCHH
T ss_pred ceeccCC-------CCCCcEEEeChHHCCHHHHHHHHHHcCCCCChhHhcCCCcCCcccCCCcCHHHhcccccccccccc
Confidence 4332232 3456899999999999999999999999999999999999999999999753 45568899999
Q ss_pred CC
Q 015013 310 ED 311 (414)
Q Consensus 310 ~~ 311 (414)
|-
T Consensus 250 e~ 251 (306)
T 2wsi_A 250 EI 251 (306)
T ss_dssp HH
T ss_pred cc
Confidence 85
No 8
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.43 E-value=2.5e-13 Score=141.95 Aligned_cols=177 Identities=12% Similarity=0.102 Sum_probs=115.8
Q ss_pred HHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHH
Q 015013 103 IMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQAL 180 (414)
Q Consensus 103 il~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~~ 180 (414)
.++++.+..+ ++++|++|||+||+++ +|+.+.+.++.++|+|+|...++..+++++++++||++++++..+.. +..
T Consensus 199 ~i~~ir~~~~~~kvvvalSGGvDSsvla~ll~~~g~~v~av~vd~g~~~~~e~~~v~~~~~~lgi~~~vv~~~~~-f~~- 276 (503)
T 2ywb_A 199 LLREVRERAGKDRVLLAVSGGVDSSTLALLLAKAGVDHLAVFVDHGLLRLGEREEVEGALRALGVNLLVVDAKER-FLK- 276 (503)
T ss_dssp HHHHHHHHHTTSEEEEEECSSHHHHHHHHHHHHHTCEEEEEEEECSCSCTTHHHHHHHHHHHTTCCEEEEECHHH-HHH-
T ss_pred HHHhhhhhccCccEEEEecCCcchHHHHHHHHHcCCeEEEEEEeCCCCChHHHHHHHHHHHHhCCCEEEEECcHH-HHH-
Confidence 3444444444 6899999999999875 88888888899999999998888999999999999999998865432 111
Q ss_pred HHhcCCCCCCcccchhhhcchhchhHHHHhc---cCcEEEeccccc-CCccCcCC--CCceecCCCCccccCCCCCeEEE
Q 015013 181 VRSKGLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKD-QSPGTRSE--IPVVQVDPVFEGLEGGVGSLVKW 254 (414)
Q Consensus 181 ~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~---~~~~~itGiRrd-ES~~~Ra~--~~~~e~d~~~~~~~~~~~~~~ki 254 (414)
...|.. .++..+..|+ ..+...+.+..+ +.+.+++|...+ +.. +|.. ...+.......+.. ...+...+
T Consensus 277 -~l~g~~-~pe~~r~~~~-~~~~~~l~~~A~~~~g~~~la~G~~~~D~~E-t~~~g~~~~iks~~~l~~l~-~~~~~~ii 351 (503)
T 2ywb_A 277 -ALKGVE-DPEEKRKIIG-REFVAAFSQVARERGPFRFLAQGTLYPDVIE-SAGGHGAAKIKSHHNVGGLP-EDLEFELL 351 (503)
T ss_dssp -HHTTCC-CHHHHHHHHH-HHHHHHHHHHHHHHCCCSEEECCCCHHHHHC------------------CCC-SSCCCEEE
T ss_pred -hhcCCC-ChHHHhhhhh-HHHHHHHHHHHHhcCCCCEEEECCcCccchh-hccCCccccccccccccccc-ccccCceE
Confidence 122321 1111122333 345667776554 678999999543 332 3320 00000000000000 01235679
Q ss_pred EeCccccHHHHHHHHHhCCCCCChhhhCCCCC
Q 015013 255 NPVANVKGNDIWNFLRTMDVPINSLHSQGYIS 286 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~~lP~npLYd~Gy~S 286 (414)
+||.+|+++||++|.+++|+|++.++++.|+.
T Consensus 352 ~PL~~l~K~EVr~~a~~~glp~~i~~~~P~~~ 383 (503)
T 2ywb_A 352 EPFRLLFKDEVRELALLLGLPDTLRLRHPFPG 383 (503)
T ss_dssp CTTTTCCHHHHHHHHHHTTCCHHHHSCCCCCT
T ss_pred ehhhcCCHHHHHHHHHHcCCChhheecCCCCC
Confidence 99999999999999999999999999998765
No 9
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=99.39 E-value=2.6e-12 Score=126.55 Aligned_cols=155 Identities=15% Similarity=0.145 Sum_probs=108.4
Q ss_pred CCcEEEEechHHHHHHH-HHHHhc----CCC-eEEEEEeCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHh
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLT----GRP-FRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRS 183 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~----~~~-i~VvflDTG~~--fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~ 183 (414)
+++++|++|||+||++| |++.+. +.+ +.++|+|+|.. .++..++++++++++|++++++..+... +...
T Consensus 24 ~~~vlva~SGG~DS~~Ll~ll~~~~~~~g~~~v~av~vd~g~r~~s~~~~~~v~~~a~~lgi~~~v~~~~~~~---~~~~ 100 (317)
T 1wy5_A 24 ERRVLIAFSGGVDSVVLTDVLLKLKNYFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRA---FAKE 100 (317)
T ss_dssp CCEEEEECCSSHHHHHHHHHHHHSTTTTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHH---HHHH
T ss_pred CCEEEEEecchHHHHHHHHHHHHHHHHcCCCEEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEEechh---hhcc
Confidence 36799999999999875 888774 567 89999999974 4688999999999999999888765432 2233
Q ss_pred cCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCC--CCccccCCCCCeEEEEeCcc
Q 015013 184 KGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDP--VFEGLEGGVGSLVKWNPVAN 259 (414)
Q Consensus 184 ~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~--~~~~~~~~~~~~~ki~PL~d 259 (414)
.|. +...||...+...+.+..+ +.+.+++|...|+.. ...-+....... ...+... ..+ ..++||++
T Consensus 101 ~~~------~~e~~ar~~Ry~~l~~~a~~~g~~~i~~Gh~~dD~~-Et~l~~l~rg~g~~gl~~~~~-~~~-~iirPLl~ 171 (317)
T 1wy5_A 101 NRM------SLEEAGRFLRYKFLKEILESEGFDCIATAHHLNDLL-ETSLLFFTRGTGLDGLIGFLP-KEE-VIRRPLYY 171 (317)
T ss_dssp TTC------CHHHHHHHHHHHHHHHHHHHTTCSEEECCCCHHHHH-HHHHHHHHHCCCHHHHHCSCS-EET-TEECTTTT
T ss_pred CCC------CHHHHHHHHHHHHHHHHHHHcCCCEEEEeCchhHHH-HHHHHHHHhCCCcccccCCCC-CCC-eEECCCcc
Confidence 332 3457888888888888776 567999999988643 210000000000 0000000 001 35899999
Q ss_pred ccHHHHHHHHHhCCCCCCh
Q 015013 260 VKGNDIWNFLRTMDVPINS 278 (414)
Q Consensus 260 Wt~~DVw~Yi~~~~lP~np 278 (414)
|+.+||+.|++.+|+|+..
T Consensus 172 ~~k~eI~~~~~~~gl~~~~ 190 (317)
T 1wy5_A 172 VKRSEIEEYAKFKGLRWVE 190 (317)
T ss_dssp CCHHHHHHHHHHTTCCCCC
T ss_pred CCHHHHHHHHHHcCCCeeE
Confidence 9999999999999999864
No 10
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=99.37 E-value=1.6e-12 Score=127.74 Aligned_cols=165 Identities=18% Similarity=0.241 Sum_probs=101.1
Q ss_pred CCcEEEEechHHHHHHH-HHHHhc-CCCeEEEEEeCCCCcHHHHHHHHH-HHHHhCCcEEEEcCChHHHHHHHHhcCCCC
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDE-VEKHFGIRIEYMFPDAVEVQALVRSKGLFS 188 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~-~~~i~VvflDTG~~fpET~~~v~~-l~~~~gl~i~~~~P~~~~~~~~~~~~G~~~ 188 (414)
+++++|++|||+||+++ +|+.+. +.++.++|+|+|...++..+.+.+ +++++|++++++..+.. +.. ...|..
T Consensus 20 ~~kvlvalSGGvDSsvla~ll~~~~g~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-f~~--~l~~~~- 95 (308)
T 2dpl_A 20 DSKAIIALSGGVDSSTAAVLAHKAIGDRLHAVFVNTGFLRKGEPEFVVKTFRDEFGMNLHYVDAQDR-FFS--ALKGVT- 95 (308)
T ss_dssp TSCEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCCCTTHHHHHHHHHTTTTCCEEEEEECHHH-HHH--HTTTCC-
T ss_pred CCCEEEEEeChHHHHHHHHHHHHhhCCCEEEEEEcCCCCChHHHHHHHHHHHHHcCCcEEEEECCHH-HHH--hhhCCC-
Confidence 36899999999999875 888776 788999999999866544445555 66789999988765422 111 122321
Q ss_pred CCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEEEeCccccHHHHH
Q 015013 189 FYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 266 (414)
Q Consensus 189 ~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~DVw 266 (414)
.+...+..||..+ ...+.+..+ +.+.+++|...++-..++..+.... + ..+. ....+...++||.+|+++||+
T Consensus 96 ~pe~~~~~~~~~~-~~~l~~~A~~~g~~~la~Gh~~dD~~Et~~~iks~~--~-~~~l-~~~~~~~virPL~~l~K~EI~ 170 (308)
T 2dpl_A 96 DPEEKRKIIGRVF-IEVFEEVAKKIGAEYLIQGTIAPDWIESQGKIKSHH--N-VGGL-PEKLNLKLIEPLRDLYKDEVR 170 (308)
T ss_dssp CHHHHHHHHHHHH-HHHHHHHHHHHTCSEEECCCCCC-------------------------CCCEEECTTTTCCHHHHH
T ss_pred CHHHHHHHHHHHH-HHHHHHHHHHcCcCEEEECCCCccchhhccchhhhh--c-cccC-CccCCCeEEEEcccCCHHHHH
Confidence 1111123454433 344444443 5789999998775432332222110 0 0000 001245679999999999999
Q ss_pred HHHHhCCCCCChhhhCCCC
Q 015013 267 NFLRTMDVPINSLHSQGYI 285 (414)
Q Consensus 267 ~Yi~~~~lP~npLYd~Gy~ 285 (414)
.|.+.+|+|++..+.+.|+
T Consensus 171 ~~a~~~glp~~i~~~~P~~ 189 (308)
T 2dpl_A 171 ELAKFLGLPEKIYNRMPFP 189 (308)
T ss_dssp HHHHHTTCCHHHHTCCCCC
T ss_pred HHHHHhCCCceeeecCCCC
Confidence 9999999999887776554
No 11
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=99.24 E-value=1.5e-11 Score=113.70 Aligned_cols=177 Identities=13% Similarity=0.168 Sum_probs=101.1
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCCh-HHHH-HHHHhcCCCCC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDA-VEVQ-ALVRSKGLFSF 189 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~-~~~~-~~~~~~G~~~~ 189 (414)
++++|++|||+||+++ +++.+.+.++..+++|+|....+..++++++++++|++++++..+. .... ..+...++...
T Consensus 4 ~~v~v~lSGG~DS~~ll~ll~~~~~~v~~~~~~~~~~~~~e~~~a~~~a~~lgi~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (219)
T 3bl5_A 4 EKAIVVFSGGQDSTTCLLWALKEFEEVETVTFHYNQRHSQEVEVAKSIAEKLGVKNHLLDMSLLNQLAPNALTRNDIEIE 83 (219)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSCTTCHHHHHHHHHHHTTCCCEEEEECGGGGGGSTGGGC-------
T ss_pred CCEEEEccCcHHHHHHHHHHHHcCCceEEEEEeCCCCCHHHHHHHHHHHHHhCCCeEEEeChHHhhhccccccccccccc
Confidence 5799999999999875 8888877788999999997555678999999999999988775432 1000 00000000000
Q ss_pred C--cccchhh--hcchhc-hhHHHHhc--cCcEEEecccccCCccCcCCCC----ceecCCCCccccCCCCCeEEEEeCc
Q 015013 190 Y--EDGHQEC--CRVRKV-RPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWNPVA 258 (414)
Q Consensus 190 ~--~~~~~~C--c~~~Kv-~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~----~~e~d~~~~~~~~~~~~~~ki~PL~ 258 (414)
+ ......| |+..+. .-+.++.+ +.+++++|...||..+.|...+ .+..-... .. ..+...++||+
T Consensus 84 ~~~~~~~~~~~~~r~~~~~~~~~~~a~~~g~~~i~tG~~~dd~~~~~~~~~~~~~~l~~~~~~-~~---~~~~~ii~PL~ 159 (219)
T 3bl5_A 84 VKDGELPSTFVPGRNLVFLSFASILAYQIGARHIITGVCETDFSGYPDCRDEFVKSCNVTVNL-AM---EKPFVIHTPLM 159 (219)
T ss_dssp -------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCC----CCGGGSHHHHHHHHHHHHH-HH---TSCCEEECTTT
T ss_pred ccccCCCCceeechHHHHHHHHHHHHHHcCCCEEEEeccccccCCCCCCCHHHHHHHHHHHHh-cc---CCCeEEEeccc
Confidence 0 0011112 333333 23333333 6789999999888631111100 01000000 00 02345689999
Q ss_pred cccHHHHHHHHHhCCCC---CChhhh--CCCCCCCCccCC
Q 015013 259 NVKGNDIWNFLRTMDVP---INSLHS--QGYISIGCEPCT 293 (414)
Q Consensus 259 dWt~~DVw~Yi~~~~lP---~npLYd--~Gy~SiGC~~CT 293 (414)
+|++.||+.|.+.+++| ++.-+. .|..+++|-.|+
T Consensus 160 ~~~K~ei~~~a~~~glp~~~~~~t~sc~~~~~~~~CG~C~ 199 (219)
T 3bl5_A 160 WLNKAETWKLADELGALDFVKNNTLTCYNGIIADGCGECP 199 (219)
T ss_dssp TCCHHHHHHHHHHTTCHHHHHHHCCCSTTSCCSSCCSCSH
T ss_pred cCCHHHHHHHHHHcCCCccchhheeeccCCCCCCCCCCCH
Confidence 99999999999999994 233332 233337787774
No 12
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=99.19 E-value=1.5e-11 Score=113.57 Aligned_cols=143 Identities=15% Similarity=0.184 Sum_probs=99.1
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHH---HhcCCCC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALV---RSKGLFS 188 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~---~~~G~~~ 188 (414)
++++|++|||+||+++ +++.+.+.++.++++|+|... ..++++++++++|++++++..+.......+ ...|.
T Consensus 7 ~kv~v~~SGG~DS~~ll~ll~~~g~~v~~~~v~~~~~~--~~~~~~~~a~~lgi~~~~~~~~~~~~~~~~~~~~~~~~-- 82 (203)
T 3k32_A 7 MDVHVLFSGGKDSSLSAVILKKLGYNPHLITINFGVIP--SYKLAEETAKILGFKHKVITLDRKIVEKAADMIIEHKY-- 82 (203)
T ss_dssp EEEEEECCCSHHHHHHHHHHHHTTEEEEEEEEECSSSC--TTHHHHHHHHHHTCEEEEEECCTHHHHHHHHHHHHHSS--
T ss_pred CeEEEEEECcHHHHHHHHHHHHcCCCeEEEEEeCCCch--HHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHhcCC--
Confidence 4699999999999875 888888888999999999765 568999999999999988765543222111 12222
Q ss_pred CCcccchhhhcchhchhHHHHhccCcEEEecccccCCcc--CcCCCCceecCCCCccccCCCCCeEEEEeCccccHHHHH
Q 015013 189 FYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPG--TRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGNDIW 266 (414)
Q Consensus 189 ~~~~~~~~Cc~~~Kv~Pl~ral~~~~~~itGiRrdES~~--~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~DVw 266 (414)
....|.. .+..-|.++.+++++++||..+||-.. .|..+..+. .. .+...++||+.|+++||+
T Consensus 83 ----~~~~c~~-~~~~~l~~~A~g~~~i~tGh~~dD~~et~~~~gl~~~~--~~--------~~~~iirPLl~~~k~eI~ 147 (203)
T 3k32_A 83 ----PGPAIQY-VHKTVLEILADEYSILADGTRRDDRVPKLSYSEIQSLE--MR--------KNIQYITPLMGFGYKTLR 147 (203)
T ss_dssp ----SHHHHHH-HHHHHHHHHTTTCSEEECCCCTTCCSSCCCHHHHHHHH--HH--------HTCEEECGGGGCCHHHHH
T ss_pred ----CccHHHH-HHHHHHHHHhcCCCEEEECCCcccchhhcchhhccCcc--cc--------cCCeEEeccCCCCHHHHH
Confidence 1224543 455566666568899999999998641 111111110 00 124568999999999999
Q ss_pred HHHHhCCCC
Q 015013 267 NFLRTMDVP 275 (414)
Q Consensus 267 ~Yi~~~~lP 275 (414)
+|.+++ ++
T Consensus 148 ~~a~~~-l~ 155 (203)
T 3k32_A 148 HLASEF-FI 155 (203)
T ss_dssp HHHHHH-EE
T ss_pred HHHHHh-CC
Confidence 999998 54
No 13
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=99.12 E-value=3.6e-10 Score=116.90 Aligned_cols=153 Identities=18% Similarity=0.135 Sum_probs=103.2
Q ss_pred CCcEEEEechHHHHHHH-HHHHh----cCCCeEEEEEeCCCCc---HHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHh
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHL----TGRPFRVFSLDTGRLN---PETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRS 183 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~----~~~~i~VvflDTG~~f---pET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~ 183 (414)
+++++|++|||+||++| |++.+ .+.++.++|+|.|... .+..++++++++++|++++++.-+... +...
T Consensus 18 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v~~~~~~~---~~~~ 94 (464)
T 3a2k_A 18 GAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCETAQIDVPA---FQRS 94 (464)
T ss_dssp SSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEEEECCCHH---HHTT
T ss_pred CCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEEEEechhh---hhhc
Confidence 36799999999999875 77776 4678999999999862 467789999999999999877544321 2222
Q ss_pred cCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccC------cCCCC-ce-ecCCCCccccCCCCCeEE
Q 015013 184 KGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGT------RSEIP-VV-QVDPVFEGLEGGVGSLVK 253 (414)
Q Consensus 184 ~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~------Ra~~~-~~-e~d~~~~~~~~~~~~~~k 253 (414)
.|. +....|+..+-.-+.++.+ +.+.++||...|+...+ |..-. -+ ...+.. ..++...
T Consensus 95 ~~~------~~e~~aR~~Ry~~l~~~a~~~g~~~IatgH~~dD~aEt~L~~l~rG~g~~gL~gm~~~~-----~~~~~~i 163 (464)
T 3a2k_A 95 AGL------GAQEAARICRYRFFAELMEKHQAGYVAVGHHGDDQVETILMRLVRGSTSKGYAGIPVKR-----PFHGGYL 163 (464)
T ss_dssp TTC------CSHHHHHHHHHHHHHHHHHTTTCCEEECCCCHHHHHHHHHHHHHHCCCSSSTTCSCSEE-----ECSSSEE
T ss_pred cCC------CHHHHHHHHHHHHHHHHHHHcCcCEEEEeCChHHHHHHHHHHHHcCCCcccccCCCccc-----cCCCCEE
Confidence 221 2334566666666666665 56789999988874211 21100 00 000000 0012346
Q ss_pred EEeCccccHHHHHHHHHhCCCCCCh
Q 015013 254 WNPVANVKGNDIWNFLRTMDVPINS 278 (414)
Q Consensus 254 i~PL~dWt~~DVw~Yi~~~~lP~np 278 (414)
++||++++.+||..|.+.+++|+..
T Consensus 164 iRPLl~~~k~eI~~ya~~~gl~~~~ 188 (464)
T 3a2k_A 164 IRPFLAVSRAEIEAYCRQMGLSPRC 188 (464)
T ss_dssp ECGGGGSCHHHHHHHHHHTCCSSCS
T ss_pred ECCCccCcHHHHHHHHHHcCCCeEE
Confidence 8999999999999999999999754
No 14
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=99.11 E-value=1.3e-10 Score=119.21 Aligned_cols=148 Identities=17% Similarity=0.204 Sum_probs=101.3
Q ss_pred CCcEEEEechHHHHHHH-HHHHh-----cCCCeEEEEEeCCCC--cHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHh
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHL-----TGRPFRVFSLDTGRL--NPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRS 183 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~-----~~~~i~VvflDTG~~--fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~ 183 (414)
+++|+|++|||+||++| |++.+ .+.++.++|+|.|.. ..+-.++++++++++|++++++.-+.. .
T Consensus 13 ~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~g~~v~avhvdhglr~~s~~~~~~v~~~~~~lgi~~~v~~~~~~-------~ 85 (433)
T 1ni5_A 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLA-------Q 85 (433)
T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCCCC-------C
T ss_pred CCEEEEEEcchHHHHHHHHHHHHHHHhcCCCeEEEEEEECCCCcccHHHHHHHHHHHHHcCCcEEEEEecCC-------C
Confidence 46799999999999875 87776 455788999999975 245688999999999999987743211 1
Q ss_pred cCCCCCCcccchhhhcchhchhHHHHhccCcEEEecccccCCccC------cCC-CCce-ecCCCCccccCCCCCeEEEE
Q 015013 184 KGLFSFYEDGHQECCRVRKVRPLRRALKGLRAWITGQRKDQSPGT------RSE-IPVV-QVDPVFEGLEGGVGSLVKWN 255 (414)
Q Consensus 184 ~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~~~~~~itGiRrdES~~~------Ra~-~~~~-e~d~~~~~~~~~~~~~~ki~ 255 (414)
.|. +....|+..+-.-+.++.++.+.++||...|+...+ |.. ..-+ ...+.. ..++...++
T Consensus 86 ~~~------~~e~~aR~~Ry~~l~~~a~~~~~i~tgH~~dD~aEt~L~~l~RG~g~~gL~gm~~~~-----~~~~~~iiR 154 (433)
T 1ni5_A 86 EGL------GIEAQARQARYQAFARTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVS-----EFAGTRLIR 154 (433)
T ss_dssp SSS------TTTTHHHHHHHHHHHHTCCTTEEEECCCCHHHHHHHHHHHHTTTCCTTGGGCCCSEE-----EETTEEEEC
T ss_pred CCC------CHHHHHHHHHHHHHHHHHhhCCeEEeeccchHHHHHHHHHHHcCCCcccccCCCCcc-----ccCCceEEc
Confidence 121 223456555666666666677899999988775311 211 0000 000000 002355789
Q ss_pred eCccccHHHHHHHHHhCCCCCC
Q 015013 256 PVANVKGNDIWNFLRTMDVPIN 277 (414)
Q Consensus 256 PL~dWt~~DVw~Yi~~~~lP~n 277 (414)
||++++.+||..|.+.++||+.
T Consensus 155 PLl~~~k~eI~~y~~~~gl~~~ 176 (433)
T 1ni5_A 155 PLLARTRGELVQWARQYDLRWI 176 (433)
T ss_dssp GGGSCCHHHHHHHHHHTTCCCB
T ss_pred cCccCCHHHHHHHHHHcCCCeE
Confidence 9999999999999999999974
No 15
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=99.10 E-value=1.1e-10 Score=118.49 Aligned_cols=146 Identities=17% Similarity=0.245 Sum_probs=95.2
Q ss_pred cEEEEechHHHHHHH-HHHHhc-CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHH----HHHHhcCC
Q 015013 114 DIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQ----ALVRSKGL 186 (414)
Q Consensus 114 ~i~vafSGGKDSvlL-~L~~~~-~~~i~VvflDTG~~fpET~~~v~~l~~~~gl-~i~~~~P~~~~~~----~~~~~~G~ 186 (414)
+++|++|||+||+++ +++.+. +.++..+++|+|. ++.+++++++++++|+ +++++.-.....+ ..+.....
T Consensus 2 kVvva~SGG~DSsvll~ll~~~~g~~V~av~vd~g~--~~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~~~ 79 (400)
T 1kor_A 2 KIVLAYSGGLDTSIILKWLKETYRAEVIAFTADIGQ--GEEVEEAREKALRTGASKAIALDLKEEFVRDFVFPMMRAGAV 79 (400)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHHTCEEEEEEEESSC--SSCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred cEEEEEeChHHHHHHHHHHHHhhCCcEEEEEEeCCC--HHHHHHHHHHHHHhCCCeEEEEeCcHHHHHHhhHHHHHcCCc
Confidence 689999999999874 888876 8889999999997 6779999999999999 6777643321111 11222111
Q ss_pred CC--CC--cccchhhhcchhchhHHHHhc--cCcEEEeccccc---CCccCcCCCCceecCCCCccccCCCCCeEEEEeC
Q 015013 187 FS--FY--EDGHQECCRVRKVRPLRRALK--GLRAWITGQRKD---QSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPV 257 (414)
Q Consensus 187 ~~--~~--~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrd---ES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL 257 (414)
+. +. ....+.|. ...|.++.+ +.+++++|.+.+ |+ |......... +.+..+.||
T Consensus 80 ~e~~y~~g~~~~R~~~----~~~L~~~A~~~G~~~IatG~~~d~nDq~---~f~~g~~~l~----------p~l~ii~PL 142 (400)
T 1kor_A 80 YEGYYLLGTSIARPLI----AKHLVRIAEEEGAEAIAHGATGKGNDQV---RFELTAYALK----------PDIKVIAPW 142 (400)
T ss_dssp BTTTBCCTTTTHHHHH----HHHHHHHHHHHTCSEEECCCCTTSSHHH---HHHHHHHHHC----------TTCEEECGG
T ss_pred cccccccCCccchHHH----HHHHHHHHHHcCCCEEEECCCCCcccHH---HHHHHHHhcC----------CCCEEEEee
Confidence 00 00 00122222 233444443 678999999985 33 2211111111 123458999
Q ss_pred ccc---cHHHHHHHHHhCCCCCCh
Q 015013 258 ANV---KGNDIWNFLRTMDVPINS 278 (414)
Q Consensus 258 ~dW---t~~DVw~Yi~~~~lP~np 278 (414)
.+| +++||+.|++.+|||+..
T Consensus 143 ~~~~~~tK~eI~~ya~~~gip~~~ 166 (400)
T 1kor_A 143 REWSFQGRKEMIAYAEAHGIPVPV 166 (400)
T ss_dssp GTCCCCSHHHHHHHHHHTTCCCC-
T ss_pred cccccCCHHHHHHHHHHcCCCccc
Confidence 999 999999999999999875
No 16
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=99.02 E-value=1.4e-09 Score=101.96 Aligned_cols=180 Identities=14% Similarity=0.151 Sum_probs=102.7
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCc-EEEEcCCh-HHHH-HHHHhcC--C
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDA-VEVQ-ALVRSKG--L 186 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~-i~~~~P~~-~~~~-~~~~~~G--~ 186 (414)
++++|++|||+||+++ +++.+.+.++..+++|.|....+-.++++++++++|++ ++++.-+. ..+. ..+...+ +
T Consensus 3 ~kvvv~lSGG~DS~~~l~ll~~~~~~v~av~~~~g~~~~~e~~~a~~~a~~lgi~~~~vi~~~~l~~~~~~~l~~~~~~v 82 (232)
T 2pg3_A 3 KRAVVVFSGGQDSTTCLIQALQDYDDVHCITFDYGQRHRAEIEVAQELSQKLGAAAHKVLDVGLLNELATSSLTRDSIPV 82 (232)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHCSEEEEEEEESSSSCHHHHHHHHHHHHHHTCSEEEEEECTHHHHTSHHHHHHTTCCC
T ss_pred CCEEEEecCcHHHHHHHHHHHHcCCCEEEEEEECCCCCHHHHHHHHHHHHHhCCCceEEEeChhHHHHhhhhcccccccc
Confidence 4699999999999875 88888777888999999976667789999999999998 87775431 1111 1111111 1
Q ss_pred CC--CCc-ccchhhhcchhch--hH-HHHh--ccCcEEEecccccCCccCcCCCCce--ecCCCCccccCCCCCeEEEEe
Q 015013 187 FS--FYE-DGHQECCRVRKVR--PL-RRAL--KGLRAWITGQRKDQSPGTRSEIPVV--QVDPVFEGLEGGVGSLVKWNP 256 (414)
Q Consensus 187 ~~--~~~-~~~~~Cc~~~Kv~--Pl-~ral--~~~~~~itGiRrdES~~~Ra~~~~~--e~d~~~~~~~~~~~~~~ki~P 256 (414)
+. ... ..+..|...++.. -+ ..+. .+.+.+++|...+|..+-+...+.+ ..+.... . +...+...++|
T Consensus 83 ~~~~~~~~~~~~~~~~~R~~~~~~la~~~A~~~g~~~I~~G~~~~D~~~~~~~r~~~~~~~~~~~~-~-~~~~~~~i~~P 160 (232)
T 2pg3_A 83 PDYDANAQGIPNTFVPGRNILFLTLASIYAYQVGAEAVITGVCETDFSGYPDCRDEFVKALNQAIV-L-GIARDIRFETP 160 (232)
T ss_dssp CC---------CCCCTTHHHHHHHHHHHHHHHHTCSEEECCCCSCSSSCCGGGSHHHHHHHHHHHH-H-HHTSCCEEECT
T ss_pred cccccccCCCCCCeEechHHHHHHHHHHHHHHcCcCEEEEccCccccCCCCCCCHHHHHHHHHHHH-H-hCCCCeEEEEe
Confidence 10 001 1111232222221 11 2222 2678899999988753112111000 0000000 0 00013456899
Q ss_pred CccccHHHHHHHHHhCCC-CC--ChhhhC--CCCCCCCccCCC
Q 015013 257 VANVKGNDIWNFLRTMDV-PI--NSLHSQ--GYISIGCEPCTR 294 (414)
Q Consensus 257 L~dWt~~DVw~Yi~~~~l-P~--npLYd~--Gy~SiGC~~CT~ 294 (414)
|.+|++.||+.|.+.+++ |+ ..-+.+ |-...+|-.|+.
T Consensus 161 L~~~~K~ei~~~a~~~gl~~~~~~~t~sC~~~~~~~~CG~C~~ 203 (232)
T 2pg3_A 161 LMWLNKAETWALADYYQQLDTVRYHTLTCYNGIKGDGCGQCAA 203 (232)
T ss_dssp TTTCCHHHHHHHHHHTTCHHHHHHHCCCCTTSCCTTTTSCSHH
T ss_pred cCCCCHHHHHHHHHHcCCCcccccccCCCcCCCCCCcCCcCHh
Confidence 999999999999999999 63 222222 111267776643
No 17
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=98.99 E-value=2.7e-09 Score=107.55 Aligned_cols=161 Identities=11% Similarity=0.077 Sum_probs=105.7
Q ss_pred CCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHHH----
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEVQ---- 178 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~--------fpET~~~v~~l~~~~gl~i~~~~P~~~~~~---- 178 (414)
+.+|+|++|||+||+++ +|+.+.+.++..+|+|++.. .++..+.++++++++|++++++.......+
T Consensus 9 ~~kVlVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~c~~~~d~~~a~~va~~lGIp~~vv~~~~~~~~~v~~ 88 (376)
T 2hma_A 9 KTRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDENGVCTATEDYKDVVAVADQIGIPYYSVNFEKEYWDRVFE 88 (376)
T ss_dssp GSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCCCC----CHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHH
T ss_pred CCeEEEEEeCHHHHHHHHHHHHHcCCcEEEEEEECCCcccccccCCCHHHHHHHHHHHHHhCCcEEEEeChHHHHHHHHH
Confidence 35799999999999875 88888888999999999854 357789999999999999988754432211
Q ss_pred HHHHh--cCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCC-cee-cCCC----Cc-cccCC
Q 015013 179 ALVRS--KGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIP-VVQ-VDPV----FE-GLEGG 247 (414)
Q Consensus 179 ~~~~~--~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~-~~e-~d~~----~~-~~~~~ 247 (414)
.++.. .|.. + +....|....|...+.++.. +.+.++||...++.. .+.... .+. .++. |. .....
T Consensus 89 ~~l~~y~~G~t--p-npc~~C~r~ik~~~l~~~A~~~G~d~IatGH~a~d~~-~~~~~~~l~rg~d~~kdqsyfL~~l~~ 164 (376)
T 2hma_A 89 YFLAEYRAGRT--P-NPDVMCNKEIKFKAFLDYAITLGADYVATGHYARVAR-DEDGTVHMLRGVDNGKDQTYFLSQLSQ 164 (376)
T ss_dssp HHHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHTTTCSEEECCCSEEEEE-CSSSCEEEEECSSTTTCCGGGGTTCCH
T ss_pred HHHHHHhcCCC--C-ChHHHHHHHHHHHHHHHHHHhCCCCEEEECcchhhhh-CCCchhhhhhccccccccchhccCCCh
Confidence 11222 2321 1 11235666778888887775 567899999877641 011111 111 1110 00 00000
Q ss_pred CCCeEEEEeCccccHHHHHHHHHhCCCCC
Q 015013 248 VGSLVKWNPVANVKGNDIWNFLRTMDVPI 276 (414)
Q Consensus 248 ~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~ 276 (414)
......+.||.++++.||.+|.++++||+
T Consensus 165 ~~l~~~i~PL~~~~K~eVr~~A~~~gl~~ 193 (376)
T 2hma_A 165 EQLQKTMFPLGHLEKPEVRRLAEEAGLST 193 (376)
T ss_dssp HHHTTEECTTTTCCHHHHHHHHHHTTCTT
T ss_pred hhcCcEEecCcCCCHHHHHHHHHHcCCCc
Confidence 00134689999999999999999999985
No 18
>3evi_A Phosducin-like protein 2; alpha beta, 3-layer(ABA) sandwich, unknown function; 2.70A {Homo sapiens}
Probab=98.95 E-value=3.5e-10 Score=95.62 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=46.1
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHHhhcCCCC
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIALVMGFKPE 410 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~~~~~~~~ 410 (414)
+.|+.++.++|.+.+...+.+++|||+||||||++|+.|.|.|+++++.+....+.+.|
T Consensus 3 G~v~~it~~~f~~~v~~~~~~~~vvv~F~a~wc~~C~~~~p~l~~la~~~~~v~f~kvd 61 (118)
T 3evi_A 3 GELREISGNQYVNEVTNAEEDVWVIIHLYRSSIPMCLLVNQHLSLLARKFPETKFVKAI 61 (118)
T ss_dssp CSCEECCGGGHHHHTTTCCTTCEEEEEEECTTSHHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred cceEEeCHHHHHHHHHhcCCCCeEEEEEeCCCChHHHHHHHHHHHHHHHCCCCEEEEEE
Confidence 46788999999886652222349999999999999999999999998887654444443
No 19
>3h79_A Thioredoxin-like protein; thioredoxin fold, catalytic cysteines missing, unknown funct; 1.50A {Trypanosoma cruzi} SCOP: c.47.1.0
Probab=98.94 E-value=1.2e-09 Score=91.84 Aligned_cols=51 Identities=12% Similarity=0.234 Sum_probs=45.4
Q ss_pred CCCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 350 ~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
....|+.++.++|+.++. +.+++|||.||||||++|+.|.|.|+++++.+.
T Consensus 13 ~~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~p~~~~la~~~~ 63 (127)
T 3h79_A 13 RPSRVVELTDETFDSIVM--DPEKDVFVLYYVPWSRHSVAAMRLWDDLSMSQS 63 (127)
T ss_dssp CCCCCEECCTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCCceEECChhhHHHHHh--CCCCCEEEEEECCccHHHHHHhHHHHHHHHHHH
Confidence 346789999999999875 568999999999999999999999999988764
No 20
>3zzx_A Thioredoxin; oxidoreductase; 1.88A {Litopenaeus vannamei}
Probab=98.90 E-value=5.2e-10 Score=92.30 Aligned_cols=53 Identities=17% Similarity=0.333 Sum_probs=41.5
Q ss_pred Eec-CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHHhhcCC
Q 015013 355 VTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIALVMGFK 408 (414)
Q Consensus 355 ~~l-~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~~~~~~ 408 (414)
..+ +.++|++.+. ...+++|||+|||+||++|+.|.|.|+++++.++.....+
T Consensus 3 ~~i~~~~~f~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~~~~~~~~~~~~~~~~ 56 (105)
T 3zzx_A 3 YQVKDQEDFTKQLN-EAGNKLVVIDFYATWCGPCKMIAPKLEELSQSMSDVVFLK 56 (105)
T ss_dssp EECCSHHHHHHHHH-HTTTSEEEEEEECTTCHHHHHHHHHHHHHHHHCTTEEEEE
T ss_pred EEeCCHHHHHHHHH-hcCCCEEEEEEECCCCCCccCCCcchhhhhhccCCeEEEE
Confidence 344 4578888775 3467899999999999999999999999888775444433
No 21
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=98.88 E-value=9.2e-09 Score=98.73 Aligned_cols=155 Identities=13% Similarity=0.134 Sum_probs=97.7
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhcC-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHH
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTG-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQ 178 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~~-~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~ 178 (414)
+.|+..+...+ .+++|++|||.||+++ +++.+.. .++..+++|+|...+++.++++++++++|++++++.-.. .+.
T Consensus 14 ~~l~~~v~~~~~~~vvv~lSGGiDSsv~~~l~~~~~~~~v~av~~~~~~~~~~e~~~a~~~a~~lgi~~~~i~i~~-~~~ 92 (268)
T 1xng_A 14 DFLEKEVQKRGFKKVVYGLSGGLDSAVVGVLCQKVFKENAHALLMPSSVSMPENKTDALNLCEKFSIPYTEYSIAP-YDA 92 (268)
T ss_dssp HHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHGGGEEEEECCCSSSCHHHHHHHHHHHHHHTCCEEECCCHH-HHH
T ss_pred HHHHHHHHHhCCCCEEEEccCcHHHHHHHHHHHHhCCCCEEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEeChH-HHH
Confidence 34444444433 5799999999999875 7777764 678999999998889999999999999999987764222 222
Q ss_pred HHHHhcCCCCCCcccchhh--hcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEE
Q 015013 179 ALVRSKGLFSFYEDGHQEC--CRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 254 (414)
Q Consensus 179 ~~~~~~G~~~~~~~~~~~C--c~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki 254 (414)
.+...... . .+...| |...+...+.+..+ +..++.||. .+|.. + ... ..+ + .+...+
T Consensus 93 ~~~~~~~~--~--~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg~-~~E~~--~-Gy~-----t~~-g-----d~~~~i 153 (268)
T 1xng_A 93 IFSSHFKD--A--SLTRKGNFCARLRMAFLYDYSLKSDSLVIGTSN-KSERM--L-GYG-----TLF-G-----DLACAI 153 (268)
T ss_dssp HHHHHCTT--C--CHHHHHHHHHHHHHHHHHHHHHHHTCEEBCCCC-HHHHH--H-TCS-----CTT-T-----TTCCSE
T ss_pred HHHHHhhh--c--CCchHHHHHHHHHHHHHHHHHHHCCCEEEECCc-HHHHh--c-Ccc-----ccc-C-----CCCeeE
Confidence 33322211 0 111123 22233334444333 455666664 35542 1 110 011 0 122358
Q ss_pred EeCccccHHHHHHHHHhCCCCC
Q 015013 255 NPVANVKGNDIWNFLRTMDVPI 276 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~~lP~ 276 (414)
+||.+|++.||+.|.+.+|+|.
T Consensus 154 ~PL~~l~K~ev~~la~~~gip~ 175 (268)
T 1xng_A 154 NPIGELFKTEVYELARRLNIPK 175 (268)
T ss_dssp ETTTTSCHHHHHHHHHHTTCCH
T ss_pred EecCCCCHHHHHHHHHHcCCcH
Confidence 9999999999999999999983
No 22
>2av4_A Thioredoxin-like protein 4A (DIM1); U5 snRNP-SPECIFIC 15KD prote structural genomics, structural genomics consortium, SGC, U function; 1.73A {Plasmodium yoelii}
Probab=98.87 E-value=8.2e-10 Score=97.92 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=42.6
Q ss_pred eEecC-ccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH-hhcCCCC
Q 015013 354 LVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL-VMGFKPE 410 (414)
Q Consensus 354 v~~l~-~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~-~~~~~~~ 410 (414)
+..++ .++|++.+. ...+++|||+|||+|||||+.|.|+|+++++.+.. ..+++.|
T Consensus 23 v~~l~t~~~f~~~v~-~~~~k~VVVdF~A~WCgPCk~m~PvleelA~e~~~~v~f~kVD 80 (160)
T 2av4_A 23 LQHLNSGWAVDQAIV-NEDERLVCIRFGHDYDPDCMKMDELLYKVADDIKNFCVIYLVD 80 (160)
T ss_dssp CEECCSHHHHHHHHH-HCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHTTTEEEEEEE
T ss_pred hhccCCHHHHHHHHH-hcCCCEEEEEEECCCChhHHHHHHHHHHHHHHccCCcEEEEEE
Confidence 44454 577887664 23678999999999999999999999999988854 3344433
No 23
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=98.83 E-value=3.5e-09 Score=111.19 Aligned_cols=167 Identities=15% Similarity=0.193 Sum_probs=98.3
Q ss_pred CcEEEEechHHHHHHH-HHHHhc-CCCeEEEEEeCCCCcH-HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNP-ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 189 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~-~~~i~VvflDTG~~fp-ET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~~G~~~~ 189 (414)
++++|++|||+||+++ +|+.+. +.++..+|+|+|.... |..+.++.+++++|++++++.-... +. ....|.. -
T Consensus 231 ~kvlvalSGGvDSsvla~ll~~~~G~~v~av~vd~g~~~~~e~~~~~~~~a~~lgi~~~vv~~~~~-~~--~~l~g~~-~ 306 (527)
T 3tqi_A 231 EQVIVGLSGGVDSAVTATLVHKAIGDQLVCVLVDTGLLRLNEVDEVLNVFQKHLGAKVICVDAKDR-FM--KALKGIS-D 306 (527)
T ss_dssp SCEEEECTTTHHHHHHHHHHHHHHGGGEEEEEECCSCSCTTHHHHHHHHHTTSSCCEEEEECCHHH-HH--SSSSSCC-C
T ss_pred CeEEEEEecCcCHHHHHHHHHHHhCCeEEEEEeccCCCChhHHHHHHHHHHHHcCCcEEEEeChHH-HH--HhhcCCC-C
Confidence 6799999999999875 888775 8889999999998754 5555566699999999988743211 10 0111221 0
Q ss_pred CcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCC----ceecCCCCccccCCCCCeEEEEeCccccHH
Q 015013 190 YEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIP----VVQVDPVFEGLEGGVGSLVKWNPVANVKGN 263 (414)
Q Consensus 190 ~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~----~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~ 263 (414)
+...+..|+..+ .+-+.+..+ +.+.+++|...+|-..++...+ .+.......+.. ...++..+.||.+++++
T Consensus 307 ~~~~r~~~~~~~-~~~~~~~A~~~g~~~la~Gh~~dD~~Et~~~~~g~~~~ik~~~~l~gl~-~~~~~~iirPL~~l~K~ 384 (527)
T 3tqi_A 307 PEEKRKIAGEQF-IRVFEEQAKKLNVKWLGQGTIYPDVIESAKTKTGKGHIIKTHHNVGGLP-LNMELKLIEPLRELFKD 384 (527)
T ss_dssp HHHHHHHHHHHH-HHHHHHTTTTTTCCEEECCCCHHHHHCC---------------------------CEECTTTTCCHH
T ss_pred hhhhhhhhHHHH-HHHHHHHHHHcCCCEEEccccCCccccccccCCChhheeeeecccccCc-ccccCccccchhcCCHH
Confidence 111122333222 334444433 4578999986555321110000 000000000000 01123468999999999
Q ss_pred HHHHHHHhCCCCCChhhhCCCC
Q 015013 264 DIWNFLRTMDVPINSLHSQGYI 285 (414)
Q Consensus 264 DVw~Yi~~~~lP~npLYd~Gy~ 285 (414)
||.+|.+++|+|++-.+++-|+
T Consensus 385 EIr~~a~~lGlp~~~v~~~P~p 406 (527)
T 3tqi_A 385 EVRKLGLELGLPADLIYRHPFP 406 (527)
T ss_dssp HHHHHHHHHTCCHHHHTCCCCC
T ss_pred HHHHHHHHcCCChhhhccCCCC
Confidence 9999999999999877777554
No 24
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=98.82 E-value=8.3e-09 Score=104.08 Aligned_cols=161 Identities=11% Similarity=0.089 Sum_probs=102.7
Q ss_pred CCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCC--------cHHHHHHHHHHHHHhCCcEEEEcCChHHH----H
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRL--------NPETYRFFDEVEKHFGIRIEYMFPDAVEV----Q 178 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~--------fpET~~~v~~l~~~~gl~i~~~~P~~~~~----~ 178 (414)
+.+|+|++|||+||+++ +|+.+.+.++..+|+|++.. .++..++++++++++|++++++.-....+ .
T Consensus 17 ~~kVvVa~SGGvDSsv~a~lL~~~G~~V~~v~~~~~~~~~~~~~~~s~~d~~~a~~va~~LGIp~~vvd~~~~f~~~v~~ 96 (380)
T 2der_A 17 AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFE 96 (380)
T ss_dssp CCEEEEECCSCSTTHHHHHHHHTTCCEEEEEEEECCCCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEEECHHHHHHHTHH
T ss_pred CCEEEEEEEChHHHHHHHHHHHHcCCeEEEEEEEcCccccccCCCCCHHHHHHHHHHHHHcCCcEEEEeCcHHHHHHHHH
Confidence 35799999999999875 88888888999999998754 24678999999999999998875432211 1
Q ss_pred HHHHh--cCCCCCCcccchhhhcchhchhHHHHhc---cCcEEEecccccCCc-cCcCCCCceecCC----CCccccCCC
Q 015013 179 ALVRS--KGLFSFYEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSP-GTRSEIPVVQVDP----VFEGLEGGV 248 (414)
Q Consensus 179 ~~~~~--~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~---~~~~~itGiRrdES~-~~Ra~~~~~e~d~----~~~~~~~~~ 248 (414)
.++.. .|.. + +..-.|....|...+.+... +.+.++||...++.. ..|..+- ...+. .|.-..-..
T Consensus 97 ~~~~ey~~G~t--p-npc~~Cnr~ik~~~l~~~A~~~~Gad~IatGH~a~d~~~~~~~~l~-rg~~~~kdqsy~L~~l~~ 172 (380)
T 2der_A 97 LFLAEYKAGRT--P-NPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLL-RGLDSNKDQSYFLYTLSH 172 (380)
T ss_dssp HHHHHHHTTCC--C-CHHHHHHHHTTTTHHHHHHHHTTCCSEEECCCSCEEEEETTEEEEE-CCSSTTTCCGGGGSSCCH
T ss_pred HHHHHHHcCCC--C-ChhHHHHHHHHHHHHHHHHHhhcCCCEEEEccccccccccchHHHh-cccccccccceeecCCCh
Confidence 12222 2321 1 11124555567777776654 567899998777531 0111110 00111 000000000
Q ss_pred CC-eEEEEeCccccHHHHHHHHHhCCCCC
Q 015013 249 GS-LVKWNPVANVKGNDIWNFLRTMDVPI 276 (414)
Q Consensus 249 ~~-~~ki~PL~dWt~~DVw~Yi~~~~lP~ 276 (414)
.. ...+.||.++++.||..|.++++||+
T Consensus 173 ~~l~~~i~PL~~~~K~eVr~~A~~~Gl~~ 201 (380)
T 2der_A 173 EQIAQSLFPVGELEKPQVRKIAEDLGLVT 201 (380)
T ss_dssp HHHHHEECCGGGSCHHHHHHHHHHTTCC-
T ss_pred hhcceeEccCCCCCHHHHHHHHHHcCCCC
Confidence 01 35689999999999999999999985
No 25
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=98.80 E-value=9.9e-09 Score=97.76 Aligned_cols=154 Identities=10% Similarity=0.096 Sum_probs=95.8
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhc-CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHH
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQ 178 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~-~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~ 178 (414)
..|+..+.+.+ ++++|++|||.||+++ +|+.+. +.++..+++|.|...++..+.++++++++|++++++. -...+.
T Consensus 15 ~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~~g~~v~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~-i~~~~~ 93 (249)
T 3p52_A 15 DFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQISNKANLEDALRLCADLNLEYKIIE-IQSILD 93 (249)
T ss_dssp HHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSCCSSCHHHHHHHHHHHHHTCEEEECC-CHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEE-CcHHHH
Confidence 45555556554 5799999999999875 777775 8889999999998777889999999999999987653 222222
Q ss_pred HHHHhcCCCCCCcccchhh--hcchhchhHHHHhccCc--EEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEE
Q 015013 179 ALVRSKGLFSFYEDGHQEC--CRVRKVRPLRRALKGLR--AWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 254 (414)
Q Consensus 179 ~~~~~~G~~~~~~~~~~~C--c~~~Kv~Pl~ral~~~~--~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki 254 (414)
.+... +. ...+...| |...+..-+..+.+... ++-|| .++|.. . .... .+ + .+..-+
T Consensus 94 ~~~~~--~~--~~~~~~~~n~~~r~R~~~l~~~A~~~g~~vl~tg-n~se~~-~--g~~t-----~~----g--d~~~~i 154 (249)
T 3p52_A 94 AFIKQ--SE--NTTLVSLGNFAARIRMSLLYDYSALKNSLVIGTS-NKSELL-L--GYGT-----IY----G--DLACAF 154 (249)
T ss_dssp HHHTT--CS--CCCHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCC-CHHHHH-H--TCSC-----TT----T--TTCCSE
T ss_pred HHHHh--cc--ccCCccHhHHHHHHHHHHHHHHHHHCCCeEEeCC-CHHHHH-c--cchh-----hh----c--cccCcc
Confidence 33221 11 01112233 33333344444443333 33344 334431 0 1000 01 0 012238
Q ss_pred EeCccccHHHHHHHHHhCCCC
Q 015013 255 NPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~~lP 275 (414)
+||.++++.||.++.+..|+|
T Consensus 155 ~PL~~l~K~eV~~la~~~gip 175 (249)
T 3p52_A 155 NPIGSLYKSEIYALAKYLNLH 175 (249)
T ss_dssp ETTTTSCHHHHHHHHHHTTCC
T ss_pred ccccCCcHHHHHHHHHHcCCc
Confidence 999999999999999999987
No 26
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=98.78 E-value=1.8e-08 Score=96.01 Aligned_cols=148 Identities=17% Similarity=0.196 Sum_probs=92.8
Q ss_pred CCcEEEEechHHHHHHH-HHHHhc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCCCC
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGLFS 188 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~-~-~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~~G~~~ 188 (414)
.++++|++|||.||+++ +++.+. + .++..+++|+|.. ++.++++++++++|++++++.-.. .+..+......
T Consensus 22 ~~~vvv~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~~--~~~~~a~~~a~~lgi~~~~i~i~~-~~~~~~~~l~~-- 96 (257)
T 2e18_A 22 NNGVVIGISGGVDSATVAYLATKALGKEKVLGLIMPYFEN--KDVEDAKLVAEKLGIGYKVINIKP-IVDSFVENLEL-- 96 (257)
T ss_dssp TTCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSCS--THHHHHHHHHHHHTCEEEECCCHH-HHHHHHHHHCS--
T ss_pred CCcEEEEecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCCc--hHHHHHHHHHHHhCCCEEEEEChH-HHHHHHHHhcc--
Confidence 35799999999999875 777775 3 5789999999964 788999999999999887763322 12233322211
Q ss_pred CCcccchhhhcc---hhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEEEeCccccHH
Q 015013 189 FYEDGHQECCRV---RKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGN 263 (414)
Q Consensus 189 ~~~~~~~~Cc~~---~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~ 263 (414)
. ..+... |.+ .+..-+.+..+ +..++.||...+... .... .+ + .+...++||.+|++.
T Consensus 97 ~-~~~~~~-~n~~ar~r~~~l~~~A~~~g~~vl~tg~~~e~~~--Gy~t-------~~-g-----~~~~~i~Pl~~l~K~ 159 (257)
T 2e18_A 97 N-LDRKGL-GNIMSRTRMIMLYAHANSLGRIVLGTSNRSEFLT--GYFT-------KW-G-----DGASDYAPIINLYKT 159 (257)
T ss_dssp C-CCHHHH-HHHHHHHHHHHHHHHHHHHTCEEECCCCHHHHHH--TCSC-------TT-S-----TTCSSBCTTTTSCHH
T ss_pred c-cccchh-HHHHHHHHHHHHHHHHHHcCCEEEEcCchhHHhc--CCee-------cc-C-----CCccCEeecCCCcHH
Confidence 0 011112 222 22333333333 556777886543221 1100 00 0 122348999999999
Q ss_pred HHHHHHHhCCCCCChhhh
Q 015013 264 DIWNFLRTMDVPINSLHS 281 (414)
Q Consensus 264 DVw~Yi~~~~lP~npLYd 281 (414)
||+.|.+.+|+|++-+.+
T Consensus 160 ev~~la~~~gip~~i~~~ 177 (257)
T 2e18_A 160 EVWEIAKRIGVPERIVKK 177 (257)
T ss_dssp HHHHHHHHHTCCHHHHHS
T ss_pred HHHHHHHHcCCCHHHhCC
Confidence 999999999999755543
No 27
>2dml_A Protein disulfide-isomerase A6; thioredoxin domain-containing protein 7, endoplasmic reticulum, redox-active center, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.78 E-value=5e-09 Score=87.89 Aligned_cols=55 Identities=22% Similarity=0.562 Sum_probs=45.6
Q ss_pred hhccC-CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 346 ADIFN-SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 346 ~dl~~-~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..++. .+.|+.++.++|+..+. +.++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 10 ~~l~~~~~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~ 65 (130)
T 2dml_A 10 SGLYSSSDDVIELTPSNFNREVI--QSDGLWLVEFYAPWCGHCQRLTPEWKKAATALK 65 (130)
T ss_dssp CCSSCTTSSSEECCTTTHHHHTT--TCSSCEEEEEECTTCSTTGGGHHHHHHHHHHTT
T ss_pred ccccCCCCCcEECCHHHHHHHHh--cCCCeEEEEEECCCCHHHHhhCHHHHHHHHHhc
Confidence 34443 36789999999998654 578899999999999999999999999877664
No 28
>2djj_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp1_A
Probab=98.78 E-value=3.8e-09 Score=87.39 Aligned_cols=51 Identities=16% Similarity=0.352 Sum_probs=44.1
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
++.|..++.++|+..+. ..++++||.|||+||++|+.+.|.|+++++.+..
T Consensus 6 ~~~v~~l~~~~f~~~v~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~ 56 (121)
T 2djj_A 6 EGPVTVVVAKNYNEIVL--DDTKDVLIEFYAPWCGHCKALAPKYEELGALYAK 56 (121)
T ss_dssp SCSSEECCTTTTTTSSS--CTTSCEEEEEECSSCTTHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEecccCHHHHhh--cCCCCEEEEEECCCCHhHHHhhHHHHHHHHHHhh
Confidence 45788999999988653 4789999999999999999999999998887753
No 29
>2pu9_C TRX-F, thioredoxin F-type, chloroplast; protein-protein complex, iron-sulfur, electron transport; 1.65A {Spinacia oleracea} PDB: 2pvo_C 1f9m_A
Probab=98.77 E-value=5.1e-09 Score=85.53 Aligned_cols=51 Identities=8% Similarity=0.233 Sum_probs=43.8
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+.|+.++.++|++.+. ...++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 4 ~~~v~~l~~~~~~~~~~-~~~~~~vlv~f~a~wC~~C~~~~~~l~~~~~~~~ 54 (111)
T 2pu9_C 4 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPSKAMAPKYEKLAEEYL 54 (111)
T ss_dssp TTSEEEECTTTHHHHHT-TCTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred cCccEEechHHHHHHHH-hcCCCEEEEEEECCcCHhHHHHCHHHHHHHHHCC
Confidence 45789999999999775 2368899999999999999999999999877653
No 30
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.76 E-value=3.6e-08 Score=93.88 Aligned_cols=157 Identities=15% Similarity=0.093 Sum_probs=94.9
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHH
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQA 179 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~ 179 (414)
+.|+..+...+ ++++|++|||.||+++ +|+.+...+...++++++...++..++++++++++|++++++.- ...+..
T Consensus 18 ~~l~~~v~~~~~~~vvv~lSGGiDSsv~a~l~~~~~~~~~av~~~~~~~~~~~~~~a~~~a~~lgi~~~~v~~-~~~~~~ 96 (249)
T 3fiu_A 18 NWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGLPTTALILPSDNNQHQDMQDALELIEMLNIEHYTISI-QPAYEA 96 (249)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHHHTTSCEEEEECCCTTSCHHHHHHHHHHHHHHTCEEEECCC-HHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHhCCCCEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEEEC-hHHHHH
Confidence 34444444444 6799999999999875 88888766655899999877888999999999999998877632 222333
Q ss_pred HHHhcCCCCCC-cccchhhh--cc---hhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCe
Q 015013 180 LVRSKGLFSFY-EDGHQECC--RV---RKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSL 251 (414)
Q Consensus 180 ~~~~~G~~~~~-~~~~~~Cc--~~---~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~ 251 (414)
+...-. +.+. ...+..|| .+ .+..-+..+.+ ++.+..|| .++|. +.......-| +.
T Consensus 97 ~~~~~~-~~~~~~~~~~~~~~~Ni~~r~R~~~l~~~A~~~g~~vl~TG-n~sE~---~~G~~t~~gd-----------~~ 160 (249)
T 3fiu_A 97 FLASTQ-SFTNLQNNRQLVIKGNAQARLRMMYLYAYAQQYNRIVIGTD-NACEW---YMGYFTKFGD-----------GA 160 (249)
T ss_dssp HHHHTG-GGC------CHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCC-CHHHH---HHTCSCTTTT-----------TC
T ss_pred HHHHHH-hhccCCCCcChhHHHHHHHHHHHHHHHHHHHHcCCEEEECC-CHHHH---hcCchhccCC-----------CC
Confidence 332110 0000 01122333 22 22222333332 44456677 44553 2121111001 12
Q ss_pred EEEEeCccccHHHHHHHHHhCCCC
Q 015013 252 VKWNPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 252 ~ki~PL~dWt~~DVw~Yi~~~~lP 275 (414)
.-++||.++++.||.++.+..|+|
T Consensus 161 ~~i~PL~~l~K~eVr~lA~~lglp 184 (249)
T 3fiu_A 161 ADILPLVNLKKSQVFELGKYLDVP 184 (249)
T ss_dssp CSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred cceeecccCcHHHHHHHHHHcCCc
Confidence 248999999999999999999987
No 31
>2dj1_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.75 E-value=1e-08 Score=87.17 Aligned_cols=50 Identities=20% Similarity=0.440 Sum_probs=44.5
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
...|+.++.++|++++. .++++||.||++||++|+.+.|.|+++++.+..
T Consensus 16 ~~~v~~l~~~~~~~~~~---~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~~ 65 (140)
T 2dj1_A 16 ENGVWVLNDGNFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIASTLKD 65 (140)
T ss_dssp ETTEEECCTTTHHHHHT---TCSEEEEEECCTTCHHHHTTHHHHHHHHHHHHS
T ss_pred CCCCEEcChHhHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhc
Confidence 36789999999998775 679999999999999999999999998888754
No 32
>2dbc_A PDCL2, unnamed protein product; phosducin-like protein, thioredoxin_FOLD, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.75 E-value=3.3e-09 Score=90.81 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=42.0
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++.++.++|++.+.....+++|||+|||+||++|+.|.|.|+++++.+
T Consensus 10 g~v~~i~~~~~~~~v~~~~~~~~vvv~f~a~wC~~C~~~~p~l~~la~~~ 59 (135)
T 2dbc_A 10 GELREISGNQYVNEVTNAEKDLWVVIHLYRSSVPMCLVVNQHLSVLARKF 59 (135)
T ss_dssp CSCEECCHHHHHHHTTTCCSSCEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred CceEEcCHHHHHHHHHhcCCCCEEEEEEECCCChHHHHHHHHHHHHHHHC
Confidence 46788899999887763334479999999999999999999999987765
No 33
>1x5d_A Protein disulfide-isomerase A6; PDIA6, ERP5, TXNDC7, thioredoxin like domain, redox, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.74 E-value=1.3e-08 Score=85.45 Aligned_cols=49 Identities=18% Similarity=0.560 Sum_probs=43.7
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|+.++.++|++.+. +.++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 7 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~a~wC~~C~~~~~~~~~~~~~~~ 55 (133)
T 1x5d_A 7 GDVIELTDDSFDKNVL--DSEDVWMVEFYAPWCGHCKNLEPEWAAAASEVK 55 (133)
T ss_dssp CSCEECCTTHHHHHTT--TSSSEEEEEEECTTCHHHHTHHHHHHHHHHHHH
T ss_pred CcCEEcCHhhHHHHHh--cCCCeEEEEEECCCCHHHHhhcHHHHHHHHHHH
Confidence 5688999999998764 467899999999999999999999999988876
No 34
>3hxs_A Thioredoxin, TRXP; electron transport; 2.00A {Bacteroides fragilis} PDB: 3hyp_A
Probab=98.73 E-value=5.5e-09 Score=89.03 Aligned_cols=54 Identities=19% Similarity=0.319 Sum_probs=43.3
Q ss_pred cCCCCeEecCccchHHHHhhhc---------CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 349 FNSQNLVTLNRTGMENLARLDH---------RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 349 ~~~~~v~~l~~~~~e~~v~~~~---------~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..+..++.++.++|+..+...+ .++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 19 ~~~~~v~~l~~~~f~~~l~~~~~~~~~l~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~ 81 (141)
T 3hxs_A 19 KPQSGTIHLTRAEFLKKIADYENHSKEWKYLGDKPAIVDFYADWCGPCKMVAPILEELSKEYA 81 (141)
T ss_dssp ----CCEECCHHHHHHHTCCCSSCCCCCCCCCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT
T ss_pred CCCCCcccccHHHHHHHhhccccchhHHHHhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc
Confidence 4456789999999988776221 47999999999999999999999999887765
No 35
>2trx_A Thioredoxin; electron transport; 1.68A {Escherichia coli} SCOP: c.47.1.1 PDB: 1skr_B* 1skw_B* 1sl0_B* 1sks_B* 1sl2_B* 1t7p_B* 1t8e_B* 1tk0_B* 1tk5_B* 1tk8_B* 1tkd_B* 1sl1_B* 1x9s_B* 1x9w_B* 1xoa_A 1xob_A 1zyq_B* 2ajq_B* 2bto_T* 2h6x_A ...
Probab=98.73 E-value=1.5e-08 Score=81.94 Aligned_cols=50 Identities=18% Similarity=0.374 Sum_probs=43.0
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.|+.++.++|+..+. +.++++||.||++||++|+.+.|.|+++++.+.
T Consensus 1 s~~v~~l~~~~f~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~ 50 (108)
T 2trx_A 1 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQ 50 (108)
T ss_dssp CTTEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCcceecchhhHHHHHH--hcCCeEEEEEECCCCHhHHHHHHHHHHHHHHhC
Confidence 35789999999987553 578999999999999999999999999877654
No 36
>2dj0_A Thioredoxin-related transmembrane protein 2; AVLA237, CGI-31 protein, TXNDC14, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.70 E-value=1.4e-08 Score=86.43 Aligned_cols=50 Identities=14% Similarity=0.289 Sum_probs=43.1
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|+.++.++|++.+. ...+++|||.|||+||++|+.+.|.|+++++.+.
T Consensus 7 ~~v~~l~~~~f~~~~~-~~~~~~vlv~f~a~wC~~C~~~~p~~~~l~~~~~ 56 (137)
T 2dj0_A 7 GYIKYFNDKTIDEELE-RDKRVTWIVEFFANWSNDCQSFAPIYADLSLKYN 56 (137)
T ss_dssp SCCEECCTTHHHHHHH-HSTTSCEEEEECCTTCSTTTTTHHHHHHHHHHHC
T ss_pred ceEEEccHhhHHHHHh-cCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC
Confidence 4688999999999885 4455699999999999999999999999887764
No 37
>3gnj_A Thioredoxin domain protein; APC92103, STR genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.99A {Desulfitobacterium hafniense dcb-2} SCOP: c.47.1.0
Probab=98.70 E-value=1.4e-08 Score=82.39 Aligned_cols=49 Identities=18% Similarity=0.256 Sum_probs=43.1
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..+..++.++|+..+. +.++++||.|||+||++|+.+.|.++++++.+.
T Consensus 4 ~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~~C~~C~~~~~~~~~~~~~~~ 52 (111)
T 3gnj_A 4 MSLEKLDTNTFEQLIY--DEGKACLVMFSRKNCHVCQKVTPVLEELRLNYE 52 (111)
T ss_dssp CCSEECCHHHHHHHHT--TSCCCEEEEEECSSCHHHHHHHHHHHHHHHHTT
T ss_pred CcceecCHHHHHHHHH--hcCCEEEEEEeCCCChhHHHHHHHHHHHHHHcC
Confidence 4578899999999874 477999999999999999999999999887764
No 38
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=98.70 E-value=1.4e-08 Score=97.11 Aligned_cols=51 Identities=14% Similarity=0.305 Sum_probs=44.9
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.|+.++.++|++++. .+.+++|||+||||||++|+.|.|.|+++++.+.
T Consensus 6 ~~~v~~~~~~~f~~~~~-~~~~~~v~v~f~a~wC~~C~~~~p~~~~~~~~~~ 56 (287)
T 3qou_A 6 VENIVNINESNLQQVLE-QSMTTPVLFYFWSERSQHCLQLTPILESLAAQYN 56 (287)
T ss_dssp CTTEEECCTTTHHHHHT-TTTTSCEEEEEECTTCTTTTTTHHHHHHHHHHHT
T ss_pred CCccEECCHHHHHHHHH-hcCCCeEEEEEECCCChHHHHHHHHHHHHHHHcC
Confidence 46799999999999775 3458999999999999999999999999887775
No 39
>2dj3_A Protein disulfide-isomerase A4; protein ERP-72, ERP72, CAI, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.69 E-value=7e-09 Score=87.34 Aligned_cols=50 Identities=16% Similarity=0.380 Sum_probs=43.0
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.|..++.++|+..+. +.++++||.|||+||++|+.|.|.|+++++.+.
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~ 55 (133)
T 2dj3_A 6 SGPVKVVVGKTFDAIVM--DPKKDVLIEFYAPWCGHCKQLEPIYTSLGKKYK 55 (133)
T ss_dssp SCSSEECCTTTCCCCCT--CTTSEEEEEECCTTCSHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEcCCCHHHHhc--cCCCcEEEEEECCCChhHHHHHHHHHHHHHHhc
Confidence 35688899999988664 458999999999999999999999999877764
No 40
>3tco_A Thioredoxin (TRXA-1); disulfide oxidoreductase, oxidoreductase; 1.90A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=98.68 E-value=2.2e-08 Score=80.64 Aligned_cols=49 Identities=16% Similarity=0.359 Sum_probs=43.5
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.+..++.++|+..+. .++++||.||++||++|+.+.|.|+++++.+.
T Consensus 3 ~~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~ 51 (109)
T 3tco_A 3 EDVTLVLTEENFDEVIR---NNKLVLVDCWAEWCAPCHLYEPIYKKVAEKYK 51 (109)
T ss_dssp CCCCEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCeEEEecHHHHHHHHh---cCCeEEEEEECCCCHHHHhhhHHHHHHHHHhC
Confidence 35788999999999876 58999999999999999999999999887664
No 41
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=98.67 E-value=5.6e-08 Score=101.95 Aligned_cols=165 Identities=15% Similarity=0.163 Sum_probs=97.2
Q ss_pred CcEEEEechHHHHHHH-HHHHhc-CCCeEEEEEeCCCCcHHHHHHH-HHHHHHhCCcEEEEcCChHHHHHHHHhcCCCCC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLNPETYRFF-DEVEKHFGIRIEYMFPDAVEVQALVRSKGLFSF 189 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~-~~~i~VvflDTG~~fpET~~~v-~~l~~~~gl~i~~~~P~~~~~~~~~~~~G~~~~ 189 (414)
+++++++|||.||+++ +|+.+. +.++..+|+|+|.......+.+ +.+++++|++++++.-.. .+.+. ..|.. -
T Consensus 228 ~~vvvalSGGvDSsv~a~ll~~a~G~~v~av~v~~g~~~~~e~~~~~~~la~~lgi~~~~v~~~~-~f~~~--l~~~~-~ 303 (525)
T 1gpm_A 228 DKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFGLNIVHVPAED-RFLSA--LAGEN-D 303 (525)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHTTTTCCCEEEEECHH-HHHHH--HTTCC-C
T ss_pred cceEEEecCCCCHHHHHHHHHHHhCCCEEEEEEeCCCCCchHHHHHHHHHHHHhCCcEEEEeccH-HHHHh--hcCCC-C
Confidence 6799999999999875 777775 7889999999997655445555 448889999998774332 11111 12321 1
Q ss_pred CcccchhhhcchhchhHHHHhc---cCcEEEecccccCCccC-c----CCCCceecCCCCccccCCCCCeEEEEeCcccc
Q 015013 190 YEDGHQECCRVRKVRPLRRALK---GLRAWITGQRKDQSPGT-R----SEIPVVQVDPVFEGLEGGVGSLVKWNPVANVK 261 (414)
Q Consensus 190 ~~~~~~~Cc~~~Kv~Pl~ral~---~~~~~itGiRrdES~~~-R----a~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt 261 (414)
++..+..|+.. ..+-+.+..+ +.+.+++|...++-..+ + ..-...... ...+.. .......+.||.+++
T Consensus 304 pe~~~~~~~~~-~~~~l~~~A~~~~g~~~l~~Gt~~~D~~E~~~~~~~~s~~iks~~-~l~gl~-~~~~~~~i~PL~~l~ 380 (525)
T 1gpm_A 304 PEAKRKIIGRV-FVEVFDEEALKLEDVKWLAQGTIYPDVIESAASATGKAHVIKSHH-NVGGLP-KEMKMGLVEPLKELF 380 (525)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHSSSEEEEECCCCHHHHHHTTC------------------------CCEEECTTTTCC
T ss_pred hHHhhhhhhHH-HHHHHHHHHHhcCCCCEEEeCCCCcchhhhcCccccccccccccc-cccccc-cccCCcEEehhhcCC
Confidence 11111233332 2344555444 45788999843321101 1 100000000 000000 001234689999999
Q ss_pred HHHHHHHHHhCCCCCChhhhCCC
Q 015013 262 GNDIWNFLRTMDVPINSLHSQGY 284 (414)
Q Consensus 262 ~~DVw~Yi~~~~lP~npLYd~Gy 284 (414)
++||++|.++.|+|++-++++-|
T Consensus 381 K~EVr~la~~lglp~~i~~~~P~ 403 (525)
T 1gpm_A 381 KDEVRKIGLELGLPYDMLYRHPF 403 (525)
T ss_dssp HHHHHHHHHHTTCCHHHHTSCCC
T ss_pred HHHHHHHHHHcCCCHHhcccCCC
Confidence 99999999999999887877754
No 42
>3aps_A DNAJ homolog subfamily C member 10; thioredoxin fold, CXXC motif, endoplasmic reticulum, oxidore; 1.90A {Mus musculus}
Probab=98.66 E-value=2.6e-08 Score=82.47 Aligned_cols=49 Identities=24% Similarity=0.538 Sum_probs=42.0
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|..++.++|+..+. +.++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 3 ~~v~~l~~~~f~~~~~--~~~~~~lv~f~a~~C~~C~~~~~~~~~~~~~~~ 51 (122)
T 3aps_A 3 QASIDLTPQTFNEKVL--QGKTHWVVDFYAPWCGPCQNFAPEFELLARMIK 51 (122)
T ss_dssp CCSEECCHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred cchhcCCHHHHHHHHh--cCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhc
Confidence 4688999999966443 578999999999999999999999999887764
No 43
>2i4a_A Thioredoxin; acidophIle, disulfide exchange, oxidoreductase; 1.00A {Acetobacter aceti}
Probab=98.66 E-value=3.6e-08 Score=79.16 Aligned_cols=49 Identities=16% Similarity=0.297 Sum_probs=42.9
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|+.++.++|+..+. ..++++||.||++||++|+.+.|.|+++++.+.
T Consensus 2 ~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~ 50 (107)
T 2i4a_A 2 EHTLAVSDSSFDQDVL--KASGLVLVDFWAEWCGPCKMIGPALGEIGKEFA 50 (107)
T ss_dssp CCEEECCTTTHHHHTT--TCSSEEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CceeecchhhhhHHHH--hCCCEEEEEEECCCChhHHHHhHHHHHHHHHhC
Confidence 5689999999987663 578999999999999999999999999877764
No 44
>1faa_A Thioredoxin F; electron transport; 1.85A {Spinacia oleracea} SCOP: c.47.1.1
Probab=98.66 E-value=1.6e-08 Score=84.14 Aligned_cols=51 Identities=10% Similarity=0.307 Sum_probs=43.9
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+.++.++.++|++.+. ...++++||.|||+||++|+.+.|.++++++.+.
T Consensus 17 ~~~v~~l~~~~~~~~~~-~~~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~~ 67 (124)
T 1faa_A 17 VGKVTEVNKDTFWPIVK-AAGDKPVVLDMFTQWCGPCKAMAPKYEKLAEEYL 67 (124)
T ss_dssp TTSEEEECTTTHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCceEEecchhHHHHHH-hcCCCEEEEEEECCcCHhHHHHhHHHHHHHHHCC
Confidence 46789999999998776 2368899999999999999999999999877653
No 45
>1mek_A Protein disulfide isomerase; electron transport, redox-active center, endoplasmic reticulum; NMR {Homo sapiens} SCOP: c.47.1.2
Probab=98.65 E-value=1.3e-08 Score=83.28 Aligned_cols=48 Identities=19% Similarity=0.458 Sum_probs=42.4
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|+.++.++|++.+. .++++||.||++||++|+.+.|.|+++++.+.
T Consensus 7 ~~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~ 54 (120)
T 1mek_A 7 DHVLVLRKSNFAEALA---AHKYLLVEFYAPWCGHCKALAPEYAKAAGKLK 54 (120)
T ss_dssp TTEEECCTTTHHHHHH---HCSEEEEEEECSSCSTTSTTHHHHHHHHHTTT
T ss_pred CCcEEechhhHHHHHc---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHh
Confidence 5789999999998775 67899999999999999999999999776653
No 46
>1zma_A Bacterocin transport accessory protein; alpha-beta-alpha-sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.25A {Streptococcus pneumoniae} SCOP: c.47.1.1
Probab=98.65 E-value=3.3e-08 Score=81.77 Aligned_cols=47 Identities=9% Similarity=0.105 Sum_probs=40.5
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..+..++.++++..+. .++++||.||||||++|+.+.|.|+++++.+
T Consensus 12 ~~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~l~~~~~~~ 58 (118)
T 1zma_A 12 KDLEVTTVVRAQEALD---KKETATFFIGRKTCPYCRKFAGTLSGVVAET 58 (118)
T ss_dssp TTSEECCHHHHHHHHH---TTCCEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCHHHHHHHHh---CCCeEEEEEECCCCccHHHHHHHHHHHHHhc
Confidence 3567888888988765 6789999999999999999999999987755
No 47
>1t00_A Thioredoxin, TRX; redox regulation, multifunction macromolecule, electron transport; 1.51A {Streptomyces coelicolor}
Probab=98.64 E-value=3.5e-08 Score=80.32 Aligned_cols=49 Identities=20% Similarity=0.362 Sum_probs=42.1
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
++.|..++.++|+..+. +.++++||.||++||++|+.+.|.|+++++.+
T Consensus 4 ~~~v~~l~~~~~~~~~~--~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 52 (112)
T 1t00_A 4 AGTLKHVTDDSFEQDVL--KNDKPVLVDFWAAWCGPCRQIAPSLEAIAAEY 52 (112)
T ss_dssp SCCCEEECTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred cceEEecchhhHHHHHh--hCCCeEEEEEECCCCHhHHhcCHHHHHHHHHh
Confidence 35678999999987554 56899999999999999999999999977765
No 48
>1nsw_A Thioredoxin, TRX; thermostability, electron transport; 1.90A {Alicyclobacillus acidocaldarius} SCOP: c.47.1.1 PDB: 1rqm_A 1quw_A 1nw2_A
Probab=98.64 E-value=2.1e-08 Score=80.61 Aligned_cols=46 Identities=22% Similarity=0.452 Sum_probs=39.9
Q ss_pred eEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
|+.++.++|+.++. .++++||.||++||++|+.+.|.|+++++.+.
T Consensus 2 v~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~~ 47 (105)
T 1nsw_A 2 TMTLTDANFQQAIQ---GDGPVLVDFWAAWCGPCRMMAPVLEEFAEAHA 47 (105)
T ss_dssp CEEECTTTHHHHHS---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHST
T ss_pred ceeccHHhHHHHHh---CCCcEEEEEECCCCHHHHHHHHHHHHHHHHhc
Confidence 67899999986554 77899999999999999999999998777653
No 49
>3ed3_A Protein disulfide-isomerase MPD1; thioredoxin-like domain, CXXC, endoplasmic reticulum, glycoprotein, redox-active center; 2.00A {Saccharomyces cerevisiae}
Probab=98.64 E-value=1.8e-08 Score=98.03 Aligned_cols=50 Identities=18% Similarity=0.453 Sum_probs=44.6
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
...|+.|+.++|++++. +.+++|||.||||||++|+.+.|.|+++++.+.
T Consensus 16 ~~~vv~lt~~~f~~~i~--~~~~~vlV~F~A~wC~~C~~~~p~~~~la~~~~ 65 (298)
T 3ed3_A 16 DPHISELTPKSFDKAIH--NTNYTSLVEFYAPWCGHCKKLSSTFRKAAKRLD 65 (298)
T ss_dssp CTTCEECCHHHHHHHHT--SSSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCCeEEeCHHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHcc
Confidence 35789999999999885 578899999999999999999999999887764
No 50
>3ga4_A Dolichyl-diphosphooligosaccharide-protein glycosyltransferase subunit OST6; oxidoreductase, active site loop, redox state, membrane; HET: PG4; 1.30A {Saccharomyces cerevisiae} PDB: 3g7y_A 3g9b_A*
Probab=98.64 E-value=2.5e-08 Score=90.26 Aligned_cols=52 Identities=13% Similarity=0.206 Sum_probs=45.1
Q ss_pred CCCCeEecCccchHHHHhhhcCCCcEEEEEeC-------CCChhhHhHHHHHHHHHHHHH
Q 015013 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYA-------PWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 350 ~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyA-------pWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++.|+.|++++|++++. ...+.+|||+||| +||++|+.|.|+|+++++-+.
T Consensus 16 ~~~~vi~lt~~nF~~~v~-~~~~~~vvV~F~A~~~~~~~~wCgpCk~l~P~~e~lA~~~~ 74 (178)
T 3ga4_A 16 DDTGVITVTADNYPLLSR-GVPGYFNILYITMRGTNSNGMSCQLCHDFEKTYHAVADVIR 74 (178)
T ss_dssp CTTSEEECCTTTHHHHTT-CCTTCEEEEEEECCSBCTTSCBCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCEECCHHHHHHHHc-ccCCCcEEEEEeCCCCCCCCCCChhHHHHHHHHHHHHHHhh
Confidence 456799999999999775 3457789999999 499999999999999998886
No 51
>1gh2_A Thioredoxin-like protein; redox-active center, electron transport; 2.22A {Homo sapiens} SCOP: c.47.1.1
Probab=98.63 E-value=4.1e-08 Score=79.52 Aligned_cols=47 Identities=9% Similarity=-0.032 Sum_probs=38.8
Q ss_pred eEec-CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 354 LVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 354 v~~l-~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+..+ +.++|++.+.. ..++++||.|||+||++|+.+.|.|+++++.+
T Consensus 3 v~~i~~~~~~~~~~~~-~~~~~v~v~f~a~wC~~C~~~~~~~~~~~~~~ 50 (107)
T 1gh2_A 3 VKPVGSDPDFQPELSG-AGSRLAVVKFTMRGCGPCLRIAPAFSSMSNKY 50 (107)
T ss_dssp EEEECSGGGHHHHHHH-TTTSCEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred eEEecCHHHHHHHHHh-CCCCEEEEEEECCCChhhHHHHHHHHHHHHHC
Confidence 4445 56888887752 37899999999999999999999999987765
No 52
>3hz4_A Thioredoxin; NYSGXRC, PSI-II, reduced form, protein structure initiative, structural genomics; 2.30A {Methanosarcina mazei}
Probab=98.63 E-value=2.7e-08 Score=85.29 Aligned_cols=51 Identities=12% Similarity=0.443 Sum_probs=44.0
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
+..|..++.++|++.+. +.++++||.|||+||++|+.|.|.|+++++.+..
T Consensus 5 ~~~v~~l~~~~f~~~~~--~~~~~vlv~F~a~wC~~C~~~~~~l~~l~~~~~~ 55 (140)
T 3hz4_A 5 GSSIIEFEDMTWSQQVE--DSKKPVVVMFYSPACPYCKAMEPYFEEYAKEYGS 55 (140)
T ss_dssp TTTEEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CcceEEcchHhHHHHHH--hCCCcEEEEEECCCChhHHHHHHHHHHHHHHhCC
Confidence 46789999999985443 5789999999999999999999999998887754
No 53
>3qfa_C Thioredoxin; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_C*
Probab=98.61 E-value=9.9e-09 Score=85.13 Aligned_cols=49 Identities=14% Similarity=0.197 Sum_probs=40.7
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.....+.++|++++. ...++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 13 ~~~~~t~~~f~~~l~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~ 61 (116)
T 3qfa_C 13 VKQIESKTAFQEALD-AAGDKLVVVDFSATWCGPSKMIKPFFHSLSEKYS 61 (116)
T ss_dssp CBCCCCHHHHHHHHH-HHTTSCEEEEEECTTCHHHHHHHHHHHHHHTTCT
T ss_pred ccCCCCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
Confidence 445677889988775 2378999999999999999999999999776653
No 54
>1thx_A Thioredoxin, thioredoxin 2; oxido-reductase, electron transport; 1.60A {Nostoc SP} SCOP: c.47.1.1
Probab=98.61 E-value=3.5e-08 Score=80.35 Aligned_cols=50 Identities=22% Similarity=0.553 Sum_probs=43.3
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.|+.++.++|+..+. ..++++||.||++||++|+.+.|.|+++++.+.
T Consensus 6 ~~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~ 55 (115)
T 1thx_A 6 SKGVITITDAEFESEVL--KAEQPVLVYFWASWCGPCQLMSPLINLAANTYS 55 (115)
T ss_dssp CCSEEECCGGGHHHHTT--TCSSCEEEEEECTTCTTHHHHHHHHHHHHHHTT
T ss_pred cCceEEeeccchhhHhh--cCCceEEEEEECCCCHHHHHhHHHHHHHHHHhC
Confidence 35689999999988653 578999999999999999999999999877664
No 55
>3f3q_A Thioredoxin-1; His TAG, electron transport, cytoplasm, deoxyribonucleotide synthesis, golgi apparatus, membrane, nucleus; 1.76A {Saccharomyces cerevisiae} PDB: 3f3r_A* 2i9h_A 2fa4_A 2hsy_A 3pin_A 4dss_B
Probab=98.61 E-value=1.9e-08 Score=82.33 Aligned_cols=47 Identities=15% Similarity=0.297 Sum_probs=39.3
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.....+.++|++.+. .++++||.|||+||++|+.|.|.|+++++.+.
T Consensus 8 ~~~~~~~~~f~~~~~---~~k~vlv~f~a~wC~~C~~~~p~l~~l~~~~~ 54 (109)
T 3f3q_A 8 VTQFKTASEFDSAIA---QDKLVVVDFYATWCGPCKMIAPMIEKFSEQYP 54 (109)
T ss_dssp CEECCSHHHHHHHTT---SSSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred ccCCCCHHHHHHHHh---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHCC
Confidence 344566778887664 78999999999999999999999999887763
No 56
>3die_A Thioredoxin, TRX; electron transport, SWAP domain, redox enzymology, oxidoreductase, redox-active center, transport; 1.85A {Staphylococcus aureus} SCOP: c.47.1.1 PDB: 2o7k_A 2o85_A 2o89_A 2o87_A
Probab=98.61 E-value=3.2e-08 Score=79.40 Aligned_cols=47 Identities=15% Similarity=0.226 Sum_probs=41.7
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..++.++.++|++.+ .++++||.||++||++|+.+.|.++++++.+.
T Consensus 3 ~~v~~l~~~~~~~~~----~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~~ 49 (106)
T 3die_A 3 MAIVKVTDADFDSKV----ESGVQLVDFWATACGPCKMIAPVLEELAADYE 49 (106)
T ss_dssp CCCEECCTTTHHHHS----CSSEEEEEEECSBCHHHHHHHHHHHHHHHHTT
T ss_pred cceEECCHHHHHHHh----cCCcEEEEEECCCCHHHHHHhHHHHHHHHHhc
Confidence 357889999999866 68999999999999999999999999887764
No 57
>3uvt_A Thioredoxin domain-containing protein 5; thioredoxin-like fold, isomerase; 2.00A {Homo sapiens} PDB: 2diz_A 3uj1_A
Probab=98.60 E-value=4.3e-08 Score=79.28 Aligned_cols=47 Identities=15% Similarity=0.417 Sum_probs=40.7
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
++.++.++.++|++.+. ++++||.||++||++|+.+.|.|+++++.+
T Consensus 4 ~~~v~~l~~~~~~~~~~----~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 50 (111)
T 3uvt_A 4 GSTVLALTENNFDDTIA----EGITFIKFYAPWCGHCKTLAPTWEELSKKE 50 (111)
T ss_dssp -CCSEECCTTTHHHHHH----SSEEEEEEECSSCHHHHHHHHHHHHHHTCC
T ss_pred CCcceEcChhhHHHHhc----CCcEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 35789999999999875 679999999999999999999999976553
No 58
>3d6i_A Monothiol glutaredoxin-3; thioredoxin-like, electron transport, redox- active center, transport, oxidoreductase; HET: CME; 1.50A {Saccharomyces cerevisiae}
Probab=98.60 E-value=4.1e-08 Score=80.04 Aligned_cols=48 Identities=8% Similarity=0.229 Sum_probs=37.8
Q ss_pred eEecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 354 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 354 v~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
|+.++. ++|++++.....++++||.|||+||++|+.+.|.|+++++.+
T Consensus 2 v~~i~~~~~~~~~~~~~~~~~~~~v~f~a~wC~~C~~~~~~~~~~~~~~ 50 (112)
T 3d6i_A 2 VIEINDQEQFTYLTTTAAGDKLIVLYFHTSWAEPCKALKQVFEAISNEP 50 (112)
T ss_dssp EEEECCHHHHHHHHTTTTTTCCEEEEEECCC--CHHHHHHHHHHHHHCG
T ss_pred ccccCCHHHHHHHHhcccCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 677777 889887752235899999999999999999999999877653
No 59
>1dby_A Chloroplast thioredoxin M CH2; thioredoxin CH2, chloroplastic thioredoxin, oxidoreductase; NMR {Chlamydomonas reinhardtii} SCOP: c.47.1.1
Probab=98.60 E-value=4.1e-08 Score=79.10 Aligned_cols=48 Identities=23% Similarity=0.424 Sum_probs=41.3
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.|+.++.++|++.+. +.++++||.||++||++|+.+.|.|+++++.+.
T Consensus 2 ~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~ 49 (107)
T 1dby_A 2 EAGAVNDDTFKNVVL--ESSVPVLVDFWAPWCGPCRIIAPVVDEIAGEYK 49 (107)
T ss_dssp CCEEECHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred ccEeccHHHHHHHHh--cCCCcEEEEEECCCCHhHHHHHHHHHHHHHHhC
Confidence 367889999988664 568999999999999999999999999877654
No 60
>3q6o_A Sulfhydryl oxidase 1; protein disulfide isomerase, thioredoxin, thioredoxin fold, oxidoreductase, reductive methylation; HET: MLY; 2.05A {Homo sapiens}
Probab=98.60 E-value=4.1e-08 Score=92.01 Aligned_cols=51 Identities=18% Similarity=0.367 Sum_probs=45.2
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
++.|..++.++|+..+. +.+++|||.|||+||++|+.+.|.|+++++.+..
T Consensus 11 ~~~v~~l~~~~f~~~i~--~~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~~~ 61 (244)
T 3q6o_A 11 SDPLTLLQADTVRGAVL--GSRSAWAVEFFASWCGHCIAFAPTWXALAEDVKA 61 (244)
T ss_dssp TSSSEEECTTTHHHHHS--SCSSEEEEEEECTTCHHHHHHHHHHHHHHHHTGG
T ss_pred CCCceeCChhhHHHHHh--hCCCeEEEEEECCcCHHHHHHHHHHHHHHHHHHh
Confidence 36789999999999775 5679999999999999999999999998888754
No 61
>2o8v_B Thioredoxin 1; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=98.60 E-value=4.4e-08 Score=82.91 Aligned_cols=50 Identities=16% Similarity=0.301 Sum_probs=43.1
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.|+.++.++|+..+. +.++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 21 ~~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~ 70 (128)
T 2o8v_B 21 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPAKMIAPILDEIADEYQ 70 (128)
T ss_dssp CCCSEEECTTTHHHHTT--TCSSEEEEEEECSSCHHHHHTHHHHHHHHHHTT
T ss_pred ccccEecChhhHHHHHH--hcCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc
Confidence 45688999999987553 578999999999999999999999999877664
No 62
>2yzu_A Thioredoxin; redox protein, electron transport, structural genomics; 1.90A {Thermus thermophilus} PDB: 2cvk_A
Probab=98.60 E-value=4.5e-08 Score=78.59 Aligned_cols=47 Identities=15% Similarity=0.354 Sum_probs=41.1
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.|+.++.++|++++. .++++||.||++||++|+.+.|.|+++++.+.
T Consensus 2 ~v~~l~~~~~~~~~~---~~~~~lv~f~~~~C~~C~~~~~~l~~~~~~~~ 48 (109)
T 2yzu_A 2 KPIEVTDQNFDETLG---QHPLVLVDFWAEWCAPCRMIAPILEEIAKEYE 48 (109)
T ss_dssp CCEECCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHTB
T ss_pred cceEccHhHHHHHhc---CCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh
Confidence 578899999997664 67899999999999999999999999777653
No 63
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=98.59 E-value=1.1e-07 Score=96.90 Aligned_cols=144 Identities=10% Similarity=0.131 Sum_probs=91.9
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCC-CCcHHHHHHHHHHHHHh-----CCcEEEEcCChHHHHHHHHhcC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTG-RLNPETYRFFDEVEKHF-----GIRIEYMFPDAVEVQALVRSKG 185 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG-~~fpET~~~v~~l~~~~-----gl~i~~~~P~~~~~~~~~~~~G 185 (414)
++++|++|||+||+++ +++.+.+.++..+|+|++ +.-++..+.+.++++.+ |++++++.-.. ..... .. +
T Consensus 188 ~kvlvalSGGvDS~vll~ll~~~G~~v~av~v~~~~~~~~~~~~~v~~~a~~l~~~~ggi~~~vv~~~~-~~~~i-~~-~ 264 (413)
T 2c5s_A 188 GKVMVLLSGGIDSPVAAYLTMKRGVSVEAVHFHSPPFTSERAKQKVIDLAQELTKYCKRVTLHLVPFTE-VQKTI-NK-E 264 (413)
T ss_dssp EEEEEECCSSSHHHHHHHHHHHBTEEEEEEEEECTTTSCHHHHHHHHHHHHHHGGGSSCEEEEEEECHH-HHHHH-HH-H
T ss_pred CeEEEEeCCCChHHHHHHHHHHcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCeEEEEECcH-HHHHH-Hh-c
Confidence 3699999999999875 888888888889999986 44466777888888888 89888774221 11111 11 1
Q ss_pred CCCCCcccchhhhcchh---chhHHHHhc--cCcEEEecccccCCccCcCCCCce-ecCCCCccccCCCCCeEEEEeCcc
Q 015013 186 LFSFYEDGHQECCRVRK---VRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVV-QVDPVFEGLEGGVGSLVKWNPVAN 259 (414)
Q Consensus 186 ~~~~~~~~~~~Cc~~~K---v~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~-e~d~~~~~~~~~~~~~~ki~PL~d 259 (414)
. + ....| ...| ..-+.+..+ +.+++++|...+|-. .. .+.-+ ..+.. .+..-++||+.
T Consensus 265 ~---~--~~~~c-~~~Rr~~~~~~~~~A~~~g~~~I~tG~~~dD~a-e~-~l~~l~~~~~~--------~~~~virPL~~ 328 (413)
T 2c5s_A 265 I---P--SSYSM-TVMRRMMMRITERIAEERNALAITTGESLGQVA-SQ-TLDSMHTINEV--------TNYPVIRPLIT 328 (413)
T ss_dssp S---C--GGGHH-HHHHHHHHHHHHHHHHHTTCCEEECCCCSSSTT-SC-CHHHHHHHGGG--------CCSCEECTTTT
T ss_pred C---C--cccHH-HHHHHHHHHHHHHHHHHcCCCEEEEcccchhhH-HH-HHHHHhccccc--------CCCEEEeccCC
Confidence 1 1 11123 2222 222233333 567899999888753 11 11111 01110 12345899999
Q ss_pred ccHHHHHHHHHhCCCC
Q 015013 260 VKGNDIWNFLRTMDVP 275 (414)
Q Consensus 260 Wt~~DVw~Yi~~~~lP 275 (414)
++++||.+|.+..|++
T Consensus 329 l~K~eI~~~a~~~Gl~ 344 (413)
T 2c5s_A 329 MDKLEIIKIAEEIGTY 344 (413)
T ss_dssp CCHHHHHHHHHHTTCH
T ss_pred CCHHHHHHHHHHcCCC
Confidence 9999999999999994
No 64
>2voc_A Thioredoxin; electron transport, homodimer, disulfide, transport, redox-active center; 1.50A {Bacillus subtilis} PDB: 2ipa_A 2gzy_A 2gzz_A
Probab=98.58 E-value=6.2e-08 Score=79.45 Aligned_cols=45 Identities=18% Similarity=0.318 Sum_probs=40.1
Q ss_pred eEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.++.++|++.+ .++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 3 v~~l~~~~~~~~~----~~~~~lv~f~a~wC~~C~~~~~~l~~~~~~~~ 47 (112)
T 2voc_A 3 IVKATDQSFSAET----SEGVVLADFWAPWCGPSKMIAPVLEELDQEMG 47 (112)
T ss_dssp CEECCTTTHHHHH----SSSEEEEEEECTTBGGGGGHHHHHHHHHHHHT
T ss_pred eEEecHHHHHHHh----CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC
Confidence 6789999998866 67899999999999999999999999887764
No 65
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.58 E-value=4.7e-08 Score=90.39 Aligned_cols=51 Identities=22% Similarity=0.510 Sum_probs=45.4
Q ss_pred CCCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 350 ~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
..+.|+.++.++|+.++. .++++||+|||+||++|+.+.|.|+++++.+..
T Consensus 13 ~~~~v~~l~~~~~~~~~~---~~~~v~v~F~a~wC~~C~~~~p~~~~~~~~~~~ 63 (241)
T 3idv_A 13 EENGVLVLNDANFDNFVA---DKDTVLLEFYAPWCGHCKQFAPEYEKIANILKD 63 (241)
T ss_dssp EETTEEEECTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCcEEecccCHHHHHh---cCCeEEEEEECCCCHHHHHhhHHHHHHHHHHhh
Confidence 346799999999999775 789999999999999999999999999888754
No 66
>1x5e_A Thioredoxin domain containing protein 1; TMX, TXNDC1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.58 E-value=6.7e-08 Score=80.71 Aligned_cols=46 Identities=22% Similarity=0.493 Sum_probs=39.8
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|+.++.++|++++. +.+||.|||+||++|+.+.|.|+++++.+.
T Consensus 7 ~~v~~l~~~~f~~~~~-----~~vlv~f~a~wC~~C~~~~p~~~~~~~~~~ 52 (126)
T 1x5e_A 7 GNVRVITDENWRELLE-----GDWMIEFYAPWCPACQNLQPEWESFAEWGE 52 (126)
T ss_dssp CSEEECCTTTHHHHTS-----SEEEEEEECSSCHHHHHHHHHHHHHHHHHG
T ss_pred CccEEecHHHHHHHhC-----CCEEEEEECCCCHHHHHHhHHHHHHHHHhc
Confidence 5688999999998653 249999999999999999999999888764
No 67
>1r26_A Thioredoxin; redox-active disulfide, electron transport; 1.40A {Trypanosoma} SCOP: c.47.1.1
Probab=98.57 E-value=4.6e-08 Score=82.60 Aligned_cols=45 Identities=18% Similarity=0.264 Sum_probs=40.2
Q ss_pred eEecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 354 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 354 v~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
|..++. ++|++.+. .++++||.|||+||++|+.+.|.|+++++.+
T Consensus 21 v~~l~~~~~f~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 66 (125)
T 1r26_A 21 VVDVYSVEQFRNIMS---EDILTVAWFTAVWCGPCKTIERPMEKIAYEF 66 (125)
T ss_dssp CEEECCHHHHHHHHH---SSSCEEEEEECTTCHHHHHTHHHHHHHHHHC
T ss_pred eEECCCHHHHHHHHc---cCCEEEEEEECCcCHhHHHHHHHHHHHHHHC
Confidence 778888 89988774 7899999999999999999999999987765
No 68
>1w4v_A Thioredoxin, mitochondrial; antioxidant enzyme, mitochondrion, electron TRA oxidoreductase; 1.80A {Homo sapiens} PDB: 1uvz_A 1w89_A
Probab=98.57 E-value=3.3e-08 Score=82.12 Aligned_cols=51 Identities=14% Similarity=0.307 Sum_probs=43.4
Q ss_pred cCCCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 349 FNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 349 ~~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
-.+..++.++.++|++.+. +.++++||.||++||++|+.+.|.|+++++.+
T Consensus 10 ~~~~~~~~~~~~~f~~~v~--~~~k~vlv~f~a~~C~~C~~~~~~l~~~~~~~ 60 (119)
T 1w4v_A 10 HGSTTFNIQDGPDFQDRVV--NSETPVVVDFHAQWCGPCKILGPRLEKMVAKQ 60 (119)
T ss_dssp CCCSEEECCSHHHHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEEecChhhHHHHHH--cCCCcEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 3456788899999988664 57889999999999999999999999877665
No 69
>1fb6_A Thioredoxin M; electron transport; 2.10A {Spinacia oleracea} SCOP: c.47.1.1 PDB: 1fb0_A 1gl8_A 2puk_C
Probab=98.56 E-value=7.2e-08 Score=77.12 Aligned_cols=47 Identities=19% Similarity=0.469 Sum_probs=40.6
Q ss_pred eEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
|..++.++|+..+. ..++++||.||++||++|+.+.|.++++++.+.
T Consensus 2 v~~~~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 48 (105)
T 1fb6_A 2 VQDVNDSSWKEFVL--ESEVPVMVDFWAPWCGPCKLIAPVIDELAKEYS 48 (105)
T ss_dssp CEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred ceechhhhHHHHHh--cCCCcEEEEEECCCChHHHHHHHHHHHHHHHhc
Confidence 67789999988665 468899999999999999999999998777653
No 70
>3dxb_A Thioredoxin N-terminally fused to PUF60(UHM); splicing, FBP interacting repressor, RRM, electron TRAN redox-active center, transport; 2.20A {Escherichia coli O157}
Probab=98.56 E-value=5.4e-08 Score=90.14 Aligned_cols=51 Identities=18% Similarity=0.338 Sum_probs=44.5
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
...+..++.++|++.+. +.++++||.|||+||++|+.|.|.|+++++.+..
T Consensus 11 ~~~~~~lt~~~f~~~v~--~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~~~ 61 (222)
T 3dxb_A 11 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPCKMIAPILDEIADEYQG 61 (222)
T ss_dssp SCCCEECCTTTHHHHHT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCceeCCHHHHHHHHH--hcCCEEEEEEECCcCHHHHHHHHHHHHHHHHhcC
Confidence 46788999999998654 5789999999999999999999999998887653
No 71
>3cxg_A Putative thioredoxin; malaria, structural GEN oxidoreductase, structural genomics consortium, SGC; 2.00A {Plasmodium falciparum}
Probab=98.56 E-value=2.5e-08 Score=85.04 Aligned_cols=55 Identities=11% Similarity=0.312 Sum_probs=42.2
Q ss_pred hhccCCCCeEecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 346 ADIFNSQNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 346 ~dl~~~~~v~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
...+....++.++. ++|+.++. ...++++||.|||+||++|+.|.|.|+++++.+
T Consensus 14 ~~~~~~~~v~~l~~~~~~~~~l~-~~~~k~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 69 (133)
T 3cxg_A 14 LYFQGQSIYIELKNTGSLNQVFS-STQNSSIVIKFGAVWCKPCNKIKEYFKNQLNYY 69 (133)
T ss_dssp EEEETTEEEEECCCTTHHHHHHT-C-CCSEEEEEEECTTCHHHHHTHHHHHGGGGTE
T ss_pred ccccCCccEEEecChhHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHhc
Confidence 33455567788875 78887775 334689999999999999999999999866543
No 72
>3p2a_A Thioredoxin 2, putative thioredoxin-like protein; structural genomics, center for structural genomics of infec diseases, csgid; 2.19A {Yersinia pestis}
Probab=98.55 E-value=5.9e-08 Score=83.59 Aligned_cols=49 Identities=16% Similarity=0.424 Sum_probs=43.3
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+..++.++.++|+..+ ..++++||.|||+||++|+.|.|.|+++++.+.
T Consensus 37 ~~~v~~l~~~~~~~~~---~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~ 85 (148)
T 3p2a_A 37 DGEVINATAETLDKLL---QDDLPMVIDFWAPWCGPCRSFAPIFAETAAERA 85 (148)
T ss_dssp CCCCEECCTTTHHHHT---TCSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT
T ss_pred cCCceecCHHHHHHHH---hcCCcEEEEEECCCCHHHHHHHHHHHHHHHHcC
Confidence 3568899999999877 488999999999999999999999999887763
No 73
>2f51_A Thioredoxin; electron transport; 1.90A {Trichomonas vaginalis}
Probab=98.55 E-value=6.5e-08 Score=80.49 Aligned_cols=48 Identities=19% Similarity=0.353 Sum_probs=38.5
Q ss_pred CCeEec--CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTL--NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l--~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..+..+ +.++|++.+. +.++++||.|||+||++|+.+.|.|+++++.+
T Consensus 3 ~~v~~~~g~~~~~~~~~~--~~~~~vlv~f~a~wC~~C~~~~~~l~~l~~~~ 52 (118)
T 2f51_A 3 DPIVHFNGTHEALLNRIK--EAPGLVLVDFFATWCGPCQRLGQILPSIAEAN 52 (118)
T ss_dssp CCSEEECSCHHHHHHHHH--HCSSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CcceEecCCHHHHHHHHH--hCCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 456666 5677775443 36899999999999999999999999987765
No 74
>2ppt_A Thioredoxin-2; thiredoxin, zinc finger, oxidoreductase; 1.92A {Rhodobacter capsulatus}
Probab=98.55 E-value=5.6e-08 Score=85.27 Aligned_cols=48 Identities=21% Similarity=0.444 Sum_probs=42.5
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.++.++.++|++.+ ..++++||+|||+||++|+.+.|.|+++++.+.
T Consensus 47 ~~~~~l~~~~f~~~~---~~~~~vlv~F~a~wC~~C~~~~p~l~~la~~~~ 94 (155)
T 2ppt_A 47 GKVAGIDPAILARAE---RDDLPLLVDFWAPWCGPCRQMAPQFQAAAATLA 94 (155)
T ss_dssp SSEEECCHHHHHHHT---TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCccCCHHHHHHHH---hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHcc
Confidence 567899999998876 478999999999999999999999999887764
No 75
>2l5l_A Thioredoxin; structural genomics, electron transport, PSI-2, protein STRU initiative; NMR {Bacteroides vulgatus}
Probab=98.55 E-value=7.4e-08 Score=81.98 Aligned_cols=51 Identities=16% Similarity=0.333 Sum_probs=42.2
Q ss_pred CCeEecCccchHHHHhhh---------cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLD---------HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~---------~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|+.++.++|++.+... ..++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 9 ~~v~~l~~~~f~~~v~~~~~~~~~~~~~~~k~~lv~f~a~wC~~C~~~~~~l~~l~~~~~ 68 (136)
T 2l5l_A 9 GKVIHLTKAEFLAKVYNFEKNPEEWKYEGDKPAIVDFYADWCGPCKMVAPILDELAKEYD 68 (136)
T ss_dssp TSEEEECHHHHHHHTBCTTTCSSSCCBCCSSCEEEEEECTTSHHHHHHHHHHHHHHHHTT
T ss_pred CceEEecchHHHHHHHhhccCccceeecCCCEEEEEEECCcCHHHHHHHHHHHHHHHHhc
Confidence 468899999998876521 146899999999999999999999999777653
No 76
>3emx_A Thioredoxin; structural genomics, oxidoreductase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Aeropyrum pernix}
Probab=98.54 E-value=3.7e-08 Score=83.97 Aligned_cols=48 Identities=10% Similarity=0.183 Sum_probs=41.5
Q ss_pred CCCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 350 ~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++.++.++.++|++.+. . ++||.|||+||++|+.+.|.|+++++.+.
T Consensus 14 ~~~~v~~l~~~~~~~~~~---~--~vlv~F~a~wC~~C~~~~p~l~~l~~~~~ 61 (135)
T 3emx_A 14 EDGRLIYITPEEFRQLLQ---G--DAILAVYSKTCPHCHRDWPQLIQASKEVD 61 (135)
T ss_dssp ETTEEEECCHHHHHHHHT---S--SEEEEEEETTCHHHHHHHHHHHHHHTTCC
T ss_pred ccCceeecCHHHHHHHhC---C--cEEEEEECCcCHhhhHhChhHHHHHHHCC
Confidence 346789999999999775 3 99999999999999999999999877653
No 77
>2e0q_A Thioredoxin; electron transport; 1.49A {Sulfolobus tokodaii} PDB: 3hhv_A
Probab=98.54 E-value=6.9e-08 Score=76.69 Aligned_cols=46 Identities=15% Similarity=0.408 Sum_probs=40.3
Q ss_pred eEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
|+.++.++|++.+. .++++||.||++||++|+.+.|.|+++++.+.
T Consensus 1 V~~l~~~~~~~~~~---~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 46 (104)
T 2e0q_A 1 VIHLDSKNFDSFLA---SHEIAVVDFWAEWCAPCLILAPIIEELAEDYP 46 (104)
T ss_dssp CEECCTTTHHHHHH---HSSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CeecCHHHHHHHHh---cCCcEEEEEECCCChhHHHHhHHHHHHHHHcC
Confidence 56789999999875 67899999999999999999999999777653
No 78
>2qsi_A Putative hydrogenase expression/formation protein; HUPG, MCS SAD, structural genomics, protein structure initiative; 1.80A {Rhodopseudomonas palustris}
Probab=98.54 E-value=3.6e-08 Score=85.49 Aligned_cols=48 Identities=4% Similarity=0.052 Sum_probs=40.7
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCC--hhhHhHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWC--QFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC--~~Ck~m~p~~ee~~~i~a 402 (414)
....+++++|++.+. +.+++|||+|||+|| ++|+.|.|+++++++-++
T Consensus 16 g~~~vt~~~F~~~v~--~~~~~vlVdF~A~wCr~gpCk~iaPvleela~e~~ 65 (137)
T 2qsi_A 16 APTLVDEATVDDFIA--HSGKIVVLFFRGDAVRFPEAADLAVVLPELINAFP 65 (137)
T ss_dssp -CEEECTTTHHHHHH--TSSSEEEEEECCCTTTCTTHHHHHHHHHHHHHTST
T ss_pred CCcccCHhHHHHHHh--cCCCcEEEEEeCCccCCCchhhHHhHHHHHHHHcc
Confidence 345789999999886 445599999999999 999999999999877764
No 79
>2i1u_A Thioredoxin, TRX, MPT46; redox protein, electron transport; 1.30A {Mycobacterium tuberculosis} PDB: 3nof_A 3o6t_A* 2l4q_A 2l59_A
Probab=98.53 E-value=1e-07 Score=78.45 Aligned_cols=49 Identities=14% Similarity=0.335 Sum_probs=41.8
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
...+..++.++|+..+. +.++++||.||++||++|+.+.|.|+++++.+
T Consensus 11 ~~~v~~l~~~~~~~~~~--~~~~~~lv~f~~~~C~~C~~~~~~~~~~~~~~ 59 (121)
T 2i1u_A 11 KSATIKVTDASFATDVL--SSNKPVLVDFWATWCGPCKMVAPVLEEIATER 59 (121)
T ss_dssp -CCSEECCTTTHHHHTT--TCSSCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred cccceecCHHHHHHHHH--hCCCcEEEEEECCCCHHHHHHHHHHHHHHHHh
Confidence 35688999999987554 46889999999999999999999999977765
No 80
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=98.53 E-value=8.5e-08 Score=77.87 Aligned_cols=51 Identities=16% Similarity=0.382 Sum_probs=40.6
Q ss_pred CCeEec-CccchHHHHhh-hcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARL-DHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~-~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|+.+ +.++|++.+.. ...++++||.||++||++|+.+.|.|+++++.+.
T Consensus 2 ~~v~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 54 (112)
T 1ep7_A 2 GSVIVIDSKAAWDAQLAKGKEEHKPIVVDFTATWCGPCKMIAPLFETLSNDYA 54 (112)
T ss_dssp CSEEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEecCHHHHHHHHHhhcccCCeEEEEEECCCCHHHHHHHHHHHHHHHHcC
Confidence 456777 56888887762 1127899999999999999999999999777653
No 81
>3gix_A Thioredoxin-like protein 4B; PRE-mRNA splicing, TXNL4B, DLP, cell cycle, mRNA processing, mRNA splicing, nucleus, phosphoprotein, splicing; HET: SUC; 1.33A {Homo sapiens} SCOP: c.47.1.0 PDB: 1xbs_A
Probab=98.53 E-value=2.9e-08 Score=86.61 Aligned_cols=45 Identities=4% Similarity=0.078 Sum_probs=37.1
Q ss_pred cCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 357 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 357 l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+.++|++.+. .+.+++|||+|||+||++|+.+.|.|+++++.+.
T Consensus 9 ~~~~~~~~~i~-~~~~k~vlv~F~a~WC~~C~~~~p~l~~l~~~~~ 53 (149)
T 3gix_A 9 TSKKEVDQAIK-STAEKVLVLRFGRDEDPVCLQLDDILSKTSSDLS 53 (149)
T ss_dssp CSHHHHHHHHH-HCCSSEEEEEEECTTSHHHHHHHHHHHHHHTTTT
T ss_pred CCHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHcc
Confidence 35677877664 2468999999999999999999999999877654
No 82
>1a0r_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; HET: FAR; 2.80A {Bos taurus} SCOP: c.47.1.6 PDB: 1b9y_C 1b9x_C
Probab=98.52 E-value=3.6e-08 Score=93.69 Aligned_cols=52 Identities=8% Similarity=0.072 Sum_probs=43.7
Q ss_pred CCeEec-CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
+.|..+ +.++|...+.....+++|||+||||||++|+.|.|.|+++++.+..
T Consensus 112 G~V~ei~s~~~f~~~v~~~~~~k~VvV~Fya~wC~~Ck~l~p~l~~La~~~~~ 164 (245)
T 1a0r_P 112 GFVYELESGEQFLETIEKEQKITTIVVHIYEDGIKGCDALNSSLICLAAEYPM 164 (245)
T ss_dssp CSEEECCSHHHHHHHHHSSCTTCEEEEEEECTTSTTHHHHHHHHHHHHHHCTT
T ss_pred CeEEEeCCHHHHHHHHHHhcCCCEEEEEEECCCChHHHHHHHHHHHHHHHCCC
Confidence 467888 7889998886333588999999999999999999999998887643
No 83
>2xc2_A Thioredoxinn; oxidoreductase, protein disulfide reductase; 1.56A {Schistosoma mansoni} PDB: 2xbq_A 2xbi_A
Probab=98.51 E-value=9.2e-08 Score=78.79 Aligned_cols=49 Identities=22% Similarity=0.508 Sum_probs=40.9
Q ss_pred CCeEecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.+++.++. ++|++.+. ...++++||.|||+||++|+.+.|.|+++++.+
T Consensus 13 ~~v~~l~~~~~~~~~l~-~~~~~~~vv~f~a~wC~~C~~~~~~~~~~~~~~ 62 (117)
T 2xc2_A 13 SELIELKQDGDLESLLE-QHKNKLVVVDFFATWCGPCKTIAPLFKELSEKY 62 (117)
T ss_dssp CEEEECCSTTHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHTTS
T ss_pred heeEEeCCHHHHHHHHH-hCCCCEEEEEEECCCCHhHHHHhHHHHHHHHHc
Confidence 34788887 88988776 237899999999999999999999999876654
No 84
>2r2j_A Thioredoxin domain-containing protein 4; CRFS motif, chaperone, endoplasmic reticulum, S response; 2.60A {Homo sapiens}
Probab=98.49 E-value=7.5e-08 Score=96.50 Aligned_cols=48 Identities=21% Similarity=0.553 Sum_probs=41.0
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|+.|+.++|+.++. .+++|||.||||||++|+.+.|.|+++++.+.
T Consensus 5 ~~v~~l~~~~f~~~~~---~~~~vlV~F~a~wC~~C~~~~p~~~~~a~~~~ 52 (382)
T 2r2j_A 5 SEITSLDTENIDEILN---NADVALVNFYADWCRFSQMLHPIFEEASDVIK 52 (382)
T ss_dssp ---CBCCTTTHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CceEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 4588999999999775 57899999999999999999999999888873
No 85
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=98.49 E-value=1.7e-07 Score=92.58 Aligned_cols=52 Identities=21% Similarity=0.443 Sum_probs=45.3
Q ss_pred cCCCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 349 FNSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 349 ~~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.+.|..++.++|+.++. +.++++||.||||||++|+.+.|.|+++++.+.
T Consensus 246 ~~~~~v~~l~~~~f~~~~~--~~~k~~lv~f~a~wC~~C~~~~p~~~~la~~~~ 297 (361)
T 3uem_A 246 WDKQPVKVLVGKNFEDVAF--DEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYK 297 (361)
T ss_dssp TTTSSSEEECTTTHHHHHT--CTTCEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred cccCCcEEeecCchhhhcc--cCCCcEEEEEecCcCHhHHHHHHHHHHHHHHhc
Confidence 3456789999999999885 578999999999999999999999999877764
No 86
>1qgv_A Spliceosomal protein U5-15KD; snRNP, thioredoxin, transcription; 1.40A {Homo sapiens} SCOP: c.47.1.8 PDB: 1syx_A 1pqn_A
Probab=98.49 E-value=1.1e-07 Score=82.15 Aligned_cols=44 Identities=9% Similarity=0.126 Sum_probs=36.0
Q ss_pred CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 358 ~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.++|+..+. ...+++|||+|||+||++|+.+.|.|+++++.+.
T Consensus 10 ~~~~~~~~v~-~~~~k~vlv~F~a~wC~~C~~~~p~l~~l~~~~~ 53 (142)
T 1qgv_A 10 NGWQVDQAIL-SEEDRVVVIRFGHDWDPTCMKMDEVLYSIAEKVK 53 (142)
T ss_dssp SHHHHHHHHH-TCSSSEEEEEEECTTSHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHH-hcCCCEEEEEEECCCCHHHHHHHHHHHHHHHHhC
Confidence 4667776554 1258999999999999999999999999887763
No 87
>2vlu_A Thioredoxin, thioredoxin H isoform 2.; oxidoreductase, thioredoxin-fold, protein disulfide reductase; 1.70A {Hordeum vulgare var} PDB: 2vlt_A 2vlv_A 2iwt_A*
Probab=98.47 E-value=1.6e-07 Score=77.65 Aligned_cols=51 Identities=8% Similarity=0.160 Sum_probs=41.8
Q ss_pred CCeEecCccchHHHHhh-hcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~-~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..+..++.++|+..+.. ...++++||.||++||++|+.+.|.|+++++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 64 (122)
T 2vlu_A 13 EVISVHSLEQWTMQIEEANTAKKLVVIDFTASWCGPCRIMAPVFADLAKKFP 64 (122)
T ss_dssp CCEEECSHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred cceeccCHHHHHHHHHHhhccCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
Confidence 34667788999887762 1268899999999999999999999999877654
No 88
>1syr_A Thioredoxin; SGPP, structural genomics, PSI, protein structure initiative structural genomics of pathogenic protozoa consortium; 2.95A {Plasmodium falciparum} SCOP: c.47.1.1
Probab=98.47 E-value=6.8e-08 Score=79.07 Aligned_cols=47 Identities=17% Similarity=0.382 Sum_probs=41.0
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.....++.++|++++. .++++||.||++||++|+.+.|.|+++++.+
T Consensus 9 ~~~~~~~~~~f~~~~~---~~k~vlv~f~a~~C~~C~~~~~~l~~l~~~~ 55 (112)
T 1syr_A 9 MVKIVTSQAEFDSIIS---QNELVIVDFFAEWCGPCKRIAPFYEECSKTY 55 (112)
T ss_dssp CCEEECSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred eEEEECCHHHHHHHHc---cCCeEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 3456788999999875 7899999999999999999999999987765
No 89
>4euy_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; 2.90A {Bacillus cereus}
Probab=98.46 E-value=3.9e-08 Score=79.58 Aligned_cols=41 Identities=12% Similarity=0.185 Sum_probs=32.5
Q ss_pred CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 358 ~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++|++.+ +.++++||.|||+||++|+.+.|.++++++.+
T Consensus 7 ~~~~~~~~~---~~~~~vlv~f~a~wC~~C~~~~p~~~~~~~~~ 47 (105)
T 4euy_A 7 TIEELATYI---EEQQLVLLFIKTENCGVCDVMLRKVNYVLENY 47 (105)
T ss_dssp ---CCSSST---TCSSEEEEEEEESSCHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHH---hcCCCEEEEEeCCCCcchHHHHHHHHHHHHHc
Confidence 345566654 37899999999999999999999999987765
No 90
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=98.45 E-value=1.8e-07 Score=95.30 Aligned_cols=148 Identities=16% Similarity=0.230 Sum_probs=90.1
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCc-EEEEcCChHHHHHH----HHhcCC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIR-IEYMFPDAVEVQAL----VRSKGL 186 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~-i~~~~P~~~~~~~~----~~~~G~ 186 (414)
++++|++|||.||+++ +++.+.+.++..+++|.|.. +-.++++++++++|++ ++++.-......++ +.....
T Consensus 6 ~kVvvalSGGlDSsvll~lL~e~G~eV~av~vd~g~~--~e~e~a~~~A~~lGi~~~~vvd~~~ef~~~~~~~~i~~~a~ 83 (413)
T 2nz2_A 6 GSVVLAYSGGLDTSCILVWLKEQGYDVIAYLANIGQK--EDFEEARKKALKLGAKKVFIEDVSREFVEEFIWPAIQSSAL 83 (413)
T ss_dssp EEEEEECCSSHHHHHHHHHHHHTTEEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHHTTCC
T ss_pred CeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEECCcH--HHHHHHHHHHHHhCCCEEEEEeChHHHHHHHHHHHHHhCcc
Confidence 5799999999999874 88888777888999999964 4478999999999997 76653321111111 111111
Q ss_pred CCCCcccchhhhcchhch-----hHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEEEeCc-
Q 015013 187 FSFYEDGHQECCRVRKVR-----PLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVA- 258 (414)
Q Consensus 187 ~~~~~~~~~~Cc~~~Kv~-----Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~- 258 (414)
++ ..+-|....-+ -+.++.+ +.+++++|.........|..+...... +++..+.|+.
T Consensus 84 ---~e--~~y~~g~~~aRp~i~~~l~~~A~~~Ga~~IatGh~~~~nDq~rf~lg~~~l~----------p~l~ii~Pl~d 148 (413)
T 2nz2_A 84 ---YE--DRYLLGTSLARPCIARKQVEIAQREGAKYVSHGATGKGNDQVRFELSCYSLA----------PQIKVIAPWRM 148 (413)
T ss_dssp ---BT--TTBCCTTTTHHHHHHHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTCEEECGGGC
T ss_pred ---cc--cccccccccchHHHHHHHHHHHHHcCCCEEEECCcCcccchHHHHHHHHhcC----------CCCceeccccc
Confidence 11 00112111111 1222222 678999999863211123211000011 2355689999
Q ss_pred -----cc-cHHHHHHHHHhCCCCCC
Q 015013 259 -----NV-KGNDIWNFLRTMDVPIN 277 (414)
Q Consensus 259 -----dW-t~~DVw~Yi~~~~lP~n 277 (414)
+| +.+||.+|.+.+|||+.
T Consensus 149 ~~~ll~~~sK~EI~~yA~~~Gip~~ 173 (413)
T 2nz2_A 149 PEFYNRFKGRNDLMEYAKQHGIPIP 173 (413)
T ss_dssp HHHHTTCC-CHHHHHHHHHTTCCCC
T ss_pred hhhhccCCCHHHHHHHHHHcCCCee
Confidence 89 99999999999999985
No 91
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.45 E-value=2.9e-07 Score=95.21 Aligned_cols=50 Identities=22% Similarity=0.452 Sum_probs=45.4
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+.|..++.++|+.++. +.+++|||.||||||++|+.|.|.|+++++.+.
T Consensus 357 ~~~v~~l~~~~f~~~v~--~~~k~vlv~F~a~wC~~C~~~~p~~~~l~~~~~ 406 (504)
T 2b5e_A 357 DSSVFQLVGKNHDEIVN--DPKKDVLVLYYAPWCGHCKRLAPTYQELADTYA 406 (504)
T ss_dssp SCSEEEECTTTHHHHHH--CTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccccHHHhhc--cCCCCEEEEEECCCChhHHHHhHHHHHHHHHhh
Confidence 46789999999999875 578999999999999999999999999998876
No 92
>1xfl_A Thioredoxin H1; AT3G51030, structural genomics, protein structure initiative, CESG, center for eukaryotic structural genomics; NMR {Arabidopsis thaliana} SCOP: c.47.1.1
Probab=98.45 E-value=1.8e-07 Score=78.49 Aligned_cols=50 Identities=14% Similarity=0.256 Sum_probs=40.6
Q ss_pred CCeEec-CccchHHHHhhh-cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~~-~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.|+.+ +.++|++.+... ..++++||.||++||++|+.+.|.|+++++.+
T Consensus 16 ~~v~~l~~~~~~~~~l~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~ 67 (124)
T 1xfl_A 16 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKL 67 (124)
T ss_dssp SCCEEESSHHHHHHHHHHHHHTTCEEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CcEEEeCCHHHHHHHHHHhhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 456777 678888877621 25889999999999999999999999987765
No 93
>1xwb_A Thioredoxin; dimerization, redox regulation, THI X-RAY electron transport; 2.20A {Drosophila melanogaster} SCOP: c.47.1.1 PDB: 1xw9_A 1xwc_A 1xwa_A
Probab=98.45 E-value=2e-07 Score=74.59 Aligned_cols=47 Identities=11% Similarity=0.280 Sum_probs=39.2
Q ss_pred eEecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 354 LVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 354 v~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
|..++. ++|++.+. ...++++||.||++||++|+.+.|.|+++++.+
T Consensus 2 v~~l~~~~~~~~~l~-~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 49 (106)
T 1xwb_A 2 VYQVKDKADLDGQLT-KASGKLVVLDFFATWCGPCKMISPKLVELSTQF 49 (106)
T ss_dssp EEECCSHHHHHHHHH-HHTTSEEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred ceecCCHHHHHHHHH-hcCCCEEEEEEECCcCHHHHHhhHHHHHHHHHh
Confidence 466777 88888775 237889999999999999999999999977665
No 94
>2qgv_A Hydrogenase-1 operon protein HYAE; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Shigella flexneri 2A} PDB: 2hfd_A
Probab=98.44 E-value=6.5e-08 Score=84.19 Aligned_cols=48 Identities=6% Similarity=-0.010 Sum_probs=42.1
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCC--ChhhHhHHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApW--C~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+..+++++|++.+. .+++|||+|||+| |++|+.|.|+++++++-++.
T Consensus 18 g~~~~t~~~F~~~v~---~~~~vlVdF~a~~crCgpCk~iaPvleela~e~~g 67 (140)
T 2qgv_A 18 GWTPVSESRLDDWLT---QAPDGVVLLSSDPKRTPEVSDNPVMIGELLHEFPD 67 (140)
T ss_dssp TCEECCHHHHHHHHH---TCSSEEEEECCCTTTCTTTTHHHHHHHHHHTTCTT
T ss_pred CCccCCHHHHHHHHh---CCCCEEEEEeCCcccCCcHHHHHhHHHHHHHHcCC
Confidence 567899999999885 6789999999999 99999999999997776643
No 95
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=98.43 E-value=1.5e-07 Score=96.65 Aligned_cols=158 Identities=18% Similarity=0.250 Sum_probs=94.6
Q ss_pred CCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHH---HHHhcCC
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQA---LVRSKGL 186 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl-~i~~~~P~~~~~~~---~~~~~G~ 186 (414)
+++|+|+||||.||+++ +++.+.+.++..+++|.|..-.+-.++++++++++|+ +++++.-.....++ .+.. +.
T Consensus 10 ~~KVvVA~SGGlDSSvll~~L~e~G~eViavtvd~Gq~~~~ele~a~~~A~~lGi~~~~vvD~~eef~~~v~p~i~~-na 88 (455)
T 1k92_A 10 GQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTANLGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQC-GA 88 (455)
T ss_dssp TSEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEECCCTTCSCTTHHHHHHHHHTCSEEEEEECHHHHHHHHHHHHHH-TC
T ss_pred CCeEEEEEcChHHHHHHHHHHHHcCCEEEEEEEEcCCCCHHHHHHHHHHHHHhCCCeEEEEeChHHHHHHhHHHHHc-CC
Confidence 35799999999999875 8888888889999999996433456899999999999 77776432111111 1111 11
Q ss_pred CCCCc-ccchhhhcchhc--------hhHHHHhc--cCcEEEecccc--cCCccCcCCCCceecCCCCccccCCCCCeEE
Q 015013 187 FSFYE-DGHQECCRVRKV--------RPLRRALK--GLRAWITGQRK--DQSPGTRSEIPVVQVDPVFEGLEGGVGSLVK 253 (414)
Q Consensus 187 ~~~~~-~~~~~Cc~~~Kv--------~Pl~ral~--~~~~~itGiRr--dES~~~Ra~~~~~e~d~~~~~~~~~~~~~~k 253 (414)
.+. .+. . |+.++. .-+.++.+ +.+.+++|... ++- .|......... +++.-
T Consensus 89 --~y~~eg~-r-cY~l~t~~aRp~i~~~l~e~A~e~Gad~IAtGht~kgnDq--~rf~~~~~al~----------p~l~v 152 (455)
T 1k92_A 89 --FHNTTGG-L-TYFNTTPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDI--ERFYRYGLLTN----------AELQI 152 (455)
T ss_dssp --CCCEETT-E-ECCCHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTSSHH--HHHHHHHHHHC----------TTCEE
T ss_pred --cccccCc-e-ecccCCcchHHHHHHHHHHHHHHcCCCEEEECCcCCCCCH--HHHHHHHHhcC----------CCCEE
Confidence 110 011 0 111111 11222222 66899999852 221 22211111111 23556
Q ss_pred EEeCcc-------ccHHHHHHHHHhCCCCCChhhhCCCCC
Q 015013 254 WNPVAN-------VKGNDIWNFLRTMDVPINSLHSQGYIS 286 (414)
Q Consensus 254 i~PL~d-------Wt~~DVw~Yi~~~~lP~npLYd~Gy~S 286 (414)
+.|+.+ ++.+||.+|.+++|||+.---++-|.+
T Consensus 153 iaPlr~~~ll~~~lsK~EI~~yA~~~GIp~~~t~~~pyS~ 192 (455)
T 1k92_A 153 YKPWLDTDFIDELGGRHEMSEFMIACGFDYKMSVEKAYST 192 (455)
T ss_dssp ECGGGCHHHHHHSSSHHHHHHHHHHTTCCCCCCCCCSSEE
T ss_pred ECeeccccccccCCCHHHHHHHHHHcCCCcccCCCCCCcc
Confidence 899988 699999999999999986323333443
No 96
>3d22_A TRXH4, thioredoxin H-type; electron transport, cytoplasm, redox-active center, transport, oxidoreductase; 1.60A {Populus trichocarpa x populusdeltoides} PDB: 3d21_A
Probab=98.43 E-value=8.8e-08 Score=81.37 Aligned_cols=51 Identities=12% Similarity=0.117 Sum_probs=40.8
Q ss_pred CCCeEec-CccchHHHHhhh-cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 351 SQNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 351 ~~~v~~l-~~~~~e~~v~~~-~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+..++.+ +.++|++.+... ..++++||.|||+||++|+.+.|.|+++++.+
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~~~k~vvv~f~a~wC~~C~~~~~~l~~l~~~~ 75 (139)
T 3d22_A 23 GGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPSRQIAPYYIELSENY 75 (139)
T ss_dssp CTTCEEECSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCcEEEeCCHHHHHHHHHHHhhcCCEEEEEEECCCCHHHHHHHHHHHHHHHHC
Confidence 3455666 478898877532 35789999999999999999999999987765
No 97
>2wz9_A Glutaredoxin-3; protein binding; 1.55A {Homo sapiens} PDB: 2diy_A
Probab=98.43 E-value=8.2e-08 Score=83.54 Aligned_cols=49 Identities=18% Similarity=0.338 Sum_probs=40.7
Q ss_pred CCeEecC-ccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~-~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++.++ .++|+.++. ...++++||.|||+||++|+.+.|.|+++++.+
T Consensus 12 ~~v~~l~~~~~~~~~~~-~~~~~~vvv~F~a~wC~~C~~~~p~l~~l~~~~ 61 (153)
T 2wz9_A 12 AAVEEVGSAGQFEELLR-LKAKSLLVVHFWAPWAPQCAQMNEVMAELAKEL 61 (153)
T ss_dssp CCSEEECSHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEcCCHHHHHHHHH-hcCCCeEEEEEECCCCHhHHHHHHHHHHHHHHc
Confidence 4577776 588888776 223899999999999999999999999987765
No 98
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=98.42 E-value=3.1e-07 Score=74.46 Aligned_cols=50 Identities=14% Similarity=0.226 Sum_probs=40.8
Q ss_pred CCeEec-CccchHHHHhhh-cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~~-~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++.+ +.++|++.+... ..++++||.||++||++|+.+.|.|+++++.+
T Consensus 4 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~ 55 (113)
T 1ti3_A 4 GQVIACHTVDTWKEHFEKGKGSQKLIVVDFTASWCPPCKMIAPIFAELAKKF 55 (113)
T ss_dssp CCEEEECSHHHHHHHHHHHTTSSSEEEEEEECSSCHHHHHHHHHHHHHHHHC
T ss_pred CceeEeccHHHHHHHHHHhhhcCCeEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 456777 678888877632 25789999999999999999999999987765
No 99
>2trc_P Phosducin, MEKA, PP33; transducin, beta-gamma, signal transduction, regulation, phosphorylation, G proteins, thioredoxin, vision; 2.40A {Rattus norvegicus} SCOP: c.47.1.6
Probab=98.41 E-value=6.9e-08 Score=89.87 Aligned_cols=51 Identities=8% Similarity=0.085 Sum_probs=42.9
Q ss_pred CCeEec-CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|..+ +.++|..++.....+++|||.||||||++|+.|.|.|+++++.+.
T Consensus 99 g~v~~i~~~~~f~~~v~~~~~~k~vvV~F~a~wC~~C~~l~p~l~~la~~~~ 150 (217)
T 2trc_P 99 GFVYELETGEQFLETIEKEQKVTTIVVNIYEDGVRGCDALNSSLECLAAEYP 150 (217)
T ss_dssp CSEEECCSHHHHHHHHHHSCTTCEEEEEEECTTSTTHHHHHHHHHHHHTTCT
T ss_pred CeEEEcCCHHHHHHHHHhcCCCcEEEEEEECCCCccHHHHHHHHHHHHHHCC
Confidence 467888 889999988633345899999999999999999999999877663
No 100
>2b5e_A Protein disulfide-isomerase; 2.40A {Saccharomyces cerevisiae} SCOP: c.47.1.2 c.47.1.2 c.47.1.2 c.47.1.2 PDB: 3boa_A
Probab=98.41 E-value=2.3e-07 Score=96.05 Aligned_cols=50 Identities=16% Similarity=0.389 Sum_probs=44.2
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+.|+.++.++|+.++. .+++|||.||||||++|+.+.|.|+++++.+..
T Consensus 13 ~~~v~~l~~~~f~~~~~---~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~ 62 (504)
T 2b5e_A 13 DSAVVKLATDSFNEYIQ---SHDLVLAEFFAPWCGHCKNMAPEYVKAAETLVE 62 (504)
T ss_dssp TSSCEECCTTTHHHHHT---TCSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred CCCcEECCHHHHHHHHh---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcc
Confidence 35789999999999775 689999999999999999999999998877643
No 101
>2vim_A Thioredoxin, TRX; thioredoxin fold, oxidoreductase; 1.38A {Fasciola hepatica}
Probab=98.40 E-value=3.2e-07 Score=73.09 Aligned_cols=46 Identities=22% Similarity=0.418 Sum_probs=37.6
Q ss_pred EecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 355 VTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 355 ~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..++. ++|++.+. ...++++||.||++||++|+.+.|.|+++++.+
T Consensus 2 ~~i~~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~l~~~~~~~ 48 (104)
T 2vim_A 2 RVLATAADLEKLIN-ENKGRLIVVDFFAQWCGPCRNIAPKVEALAKEI 48 (104)
T ss_dssp EECCSHHHHHHHHH-TTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHC
T ss_pred eecCCHHHHHHHHH-hcCCCeEEEEEECCCCHHHHHhhHHHHHHHHHC
Confidence 45555 77888775 237889999999999999999999999977665
No 102
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=98.40 E-value=2.4e-07 Score=84.84 Aligned_cols=48 Identities=21% Similarity=0.470 Sum_probs=42.4
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+..+..++.++|+..+. .++++||.|||+||++|+.+.|.|+++++.+
T Consensus 96 ~~~v~~l~~~~f~~~~~---~~~~vlv~F~a~wC~~C~~~~p~~~~l~~~~ 143 (210)
T 3apq_A 96 DPEIITLERREFDAAVN---SGELWFVNFYSPGCSHCHDLAPTWREFAKEV 143 (210)
T ss_dssp CTTSEECCHHHHHHHHH---HSCCEEEEEECTTCHHHHHHHHHHHHHHHHT
T ss_pred CCceEEecHHHHHHHHc---cCCcEEEEEeCCCChhHHHHHHHHHHHHHHh
Confidence 35688999999998774 6889999999999999999999999987765
No 103
>3m9j_A Thioredoxin; oxidoreductase; 1.10A {Homo sapiens} SCOP: c.47.1.1 PDB: 3m9k_A 2hsh_A 1erv_A 2ifq_A 2ifq_B 1auc_A 1eru_A 1ert_A 3kd0_A 1aiu_A 3trx_A 4trx_A 1trs_A 1tru_A 1trv_A 1trw_A 3e3e_A* 1cqg_A 1cqh_A 1mdi_A ...
Probab=98.38 E-value=3.1e-07 Score=73.48 Aligned_cols=44 Identities=18% Similarity=0.375 Sum_probs=36.7
Q ss_pred CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 358 ~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.++|++.+. ...++++||.||++||++|+.+.|.++++++.+.
T Consensus 7 ~~~~~~~~l~-~~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 50 (105)
T 3m9j_A 7 SKTAFQEALD-AAGDKLVVVDFSATWCGPCKMIKPFFHSLSEKYS 50 (105)
T ss_dssp SHHHHHHHHH-HTTTSCEEEEEECTTCHHHHHHHHHHHHHHHHST
T ss_pred CHHHHHHHHH-hcCCCeEEEEEECCCChhhHHHHHHHHHHHHHcc
Confidence 5667777665 2368999999999999999999999999877663
No 104
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.38 E-value=1.9e-07 Score=95.85 Aligned_cols=51 Identities=16% Similarity=0.268 Sum_probs=43.5
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.|+.|+.++|+.++...+.+++|||.||||||++|+.|.|.|+++++.+..
T Consensus 2 ~v~~l~~~~f~~~i~~~~~~~~~lv~F~a~wC~~C~~~~p~~~~~a~~~~~ 52 (481)
T 3f8u_A 2 DVLELTDDNFESRISDTGSAGLMLVEFFAPWCGHAKRLAPEYEAAATRLKG 52 (481)
T ss_dssp CCEEECTTTHHHHTTCCSSSSEEEEEEECTTCHHHHHHHHHHHHHHHHTTT
T ss_pred ceEEecHHHHHHHHHhCCCCCeEEEEEECCCCHHHHHhHHHHHHHHHHhcC
Confidence 578999999999886222339999999999999999999999998887754
No 105
>2l6c_A Thioredoxin; oxidoreductase; NMR {Desulfovibrio vulgaris} PDB: 2l6d_A
Probab=98.37 E-value=1.1e-07 Score=77.99 Aligned_cols=44 Identities=11% Similarity=0.109 Sum_probs=35.8
Q ss_pred eEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+..++.++| +.+. .++++||.|||+||++|+.+.|.|+++++.+
T Consensus 5 ~~~~~~~~f-~~~~---~~~~~vv~f~a~wC~~C~~~~~~l~~~~~~~ 48 (110)
T 2l6c_A 5 RDITTEAGM-AHFE---GLSDAIVFFHKNLCPHCKNMEKVLDKFGARA 48 (110)
T ss_dssp SBCGGGCSH-HHHT---TCSEEEEEEECSSCSTHHHHHHHHHHHHTTC
T ss_pred eecCCHHHH-HHHH---cCCCEEEEEECCCCHhHHHHHHHHHHHHHHC
Confidence 445778888 4443 5789999999999999999999999876654
No 106
>1oaz_A Thioredoxin 1; immune system, antibody/complex, antibody, allergy, IGE, conformational diversity, multispecficity, redox-active center; 2.77A {Escherichia coli} SCOP: c.47.1.1
Probab=98.37 E-value=9.5e-08 Score=80.33 Aligned_cols=50 Identities=18% Similarity=0.374 Sum_probs=39.9
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCCh--------------hhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQ--------------FCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~--------------~Ck~m~p~~ee~~~i~a 402 (414)
++.|+.++.++|+..+. +.++++||.|||+||+ +|+.+.|.|+++++.+.
T Consensus 2 ~~~v~~l~~~~f~~~~~--~~~k~vlv~F~a~wC~~c~~l~~~~~~~~~~C~~~~p~~~~l~~~~~ 65 (123)
T 1oaz_A 2 SDKIIHLTDDSFDTDVL--KADGAILVDFWAEWCGPIEESDDRRYDLVGPCKMIAPILDEIADEYQ 65 (123)
T ss_dssp CCSCEECCSTTHHHHTT--SCSSEEEEEEECSSCSCBSSSTTSCCSCCCCCCTTHHHHTTC-----
T ss_pred CCccEecChhhHHHHHH--hCCCeEEEEEECCCCccccccccccccCCCCcHHHHHHHHHHHHHhc
Confidence 35788999999987553 5789999999999999 99999999999877764
No 107
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=98.36 E-value=4e-07 Score=74.38 Aligned_cols=51 Identities=12% Similarity=0.262 Sum_probs=41.1
Q ss_pred CCeEec-CccchHHHHhhh-cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARLD-HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~~-~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.++.+ +.++|++.+... ..++++||.||++||++|+.+.|.|+++++.+.
T Consensus 6 ~~v~~i~~~~~~~~~~~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 58 (118)
T 2vm1_A 6 GAVIACHTKQEFDTHMANGKDTGKLVIIDFTASWCGPCRVIAPVFAEYAKKFP 58 (118)
T ss_dssp CCEEECCSHHHHHHHHHHHHHHTCCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CceEEecCHHHHHHHHHhcccCCCEEEEEEECCCCHhHHHHhHHHHHHHHHCC
Confidence 457777 578888877631 247899999999999999999999999877653
No 108
>2oe3_A Thioredoxin-3; electron transport, alpha/beta sandwich, oxidized, dimer; 1.80A {Saccharomyces cerevisiae} PDB: 2oe1_A 2oe0_A
Probab=98.35 E-value=1.2e-07 Score=78.43 Aligned_cols=41 Identities=22% Similarity=0.546 Sum_probs=34.2
Q ss_pred ccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 359 RTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 359 ~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++|+.++. .++++||.|||+||++|+.+.|.|+++++.+.
T Consensus 20 ~~~~~~~~~---~~k~vvv~F~a~wC~~C~~~~p~l~~~~~~~~ 60 (114)
T 2oe3_A 20 LTEFRNLIK---QNDKLVIDFYATWCGPCKMMQPHLTKLIQAYP 60 (114)
T ss_dssp HHHHHHHHH---HCSEEEEEEECTTCHHHHHTHHHHHHHHHHCT
T ss_pred HHHHHHHHh---CCCEEEEEEECCCCHHHHHHHHHHHHHHHHCC
Confidence 455666554 67899999999999999999999999877664
No 109
>2l57_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, PSI protein structure initiative; NMR {Clostridium perfringens}
Probab=98.33 E-value=2e-07 Score=77.70 Aligned_cols=32 Identities=9% Similarity=0.225 Sum_probs=28.9
Q ss_pred cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 370 HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 370 ~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..++++||.|||+||++|+.+.|.|+++++.+
T Consensus 24 ~~~k~~lv~f~a~wC~~C~~~~~~l~~~~~~~ 55 (126)
T 2l57_A 24 KEGIPTIIMFKTDTCPYCVEMQKELSYVSKER 55 (126)
T ss_dssp CSSSCEEEEEECSSCHHHHHHHHHHHHHHHHS
T ss_pred hCCCcEEEEEECCCCccHHHHHHHHHHHHHHh
Confidence 47889999999999999999999999877665
No 110
>1z6n_A Hypothetical protein PA1234; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.47.1.1 PDB: 3lef_A
Probab=98.32 E-value=3.1e-07 Score=82.04 Aligned_cols=45 Identities=22% Similarity=0.282 Sum_probs=35.6
Q ss_pred EecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 355 VTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 355 ~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++++.++.+.. ..++++||+|||+|||+|+.+.|.++++++.+
T Consensus 39 ~~~~~~~~~~l~~--~~~k~vvv~F~A~WC~pC~~~~P~l~~l~~~~ 83 (167)
T 1z6n_A 39 NGLPSALTERLQR--IERRYRLLVAGEMWCPDCQINLAALDFAQRLQ 83 (167)
T ss_dssp HCCCHHHHHHHHT--CCSCEEEEEECCTTCHHHHHHHHHHHHHHHHC
T ss_pred cCCCHHHHHHHHH--hCCCEEEEEEECCCChhHHHHHHHHHHHHHHC
Confidence 4566666666543 35689999999999999999999999977654
No 111
>1v98_A Thioredoxin; oxidoreductase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.82A {Thermus thermophilus}
Probab=98.30 E-value=2.7e-07 Score=78.61 Aligned_cols=48 Identities=21% Similarity=0.385 Sum_probs=27.7
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.++.++.++|+..+. +.++ +||.||++||++|+.+.|.|+++++.+.
T Consensus 33 ~~v~~l~~~~~~~~~~--~~~~-vvv~f~~~~C~~C~~~~~~l~~l~~~~~ 80 (140)
T 1v98_A 33 PWVVEADEKGFAQEVA--GAPL-TLVDFFAPWCGPCRLVSPILEELARDHA 80 (140)
T ss_dssp ------------------CCCE-EEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CccccCCHHHHHHHHH--cCCC-EEEEEECCCCHHHHHHHHHHHHHHHHcc
Confidence 4577889999988765 3445 9999999999999999999999877664
No 112
>3t58_A Sulfhydryl oxidase 1; oxidoreductase; HET: FAD; 2.40A {Mus musculus} PDB: 3t59_A*
Probab=98.30 E-value=6.2e-07 Score=93.92 Aligned_cols=55 Identities=15% Similarity=0.286 Sum_probs=46.8
Q ss_pred hccC-CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 347 DIFN-SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 347 dl~~-~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+|+ ++.|..++.++|+..+. +.+++|||+|||+||++|++|.|.|+++++.+..
T Consensus 6 ~Ly~~~~~V~~Lt~~~f~~~v~--~~~k~vlV~FyA~WC~pCk~~~P~l~~la~~~~~ 61 (519)
T 3t58_A 6 VLYSSSDPLTLLDADSVRPTVL--GSSSAWAVEFFASWCGHAIAFAPTWKELANDVKD 61 (519)
T ss_dssp CSCCTTSSSEEECTTTHHHHHS--SCSSEEEEEEECTTSHHHHHHHHHHHHHHHHHGG
T ss_pred ccCCCCCCcEECChHHHHHHHH--hCCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhC
Confidence 3443 35789999999998775 5679999999999999999999999999888764
No 113
>3f8u_A Protein disulfide-isomerase A3ERP57; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens} PDB: 2dmm_A 2alb_A
Probab=98.30 E-value=5.7e-07 Score=92.35 Aligned_cols=52 Identities=15% Similarity=0.410 Sum_probs=45.1
Q ss_pred CCCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 350 NSQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 350 ~~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
+...+..++.++|+.++. +.+++|||.||||||++|+.+.|.|+++++.+..
T Consensus 350 ~~~~v~~~~~~~~~~~~~--~~~k~vlv~f~a~wC~~C~~~~p~~~~l~~~~~~ 401 (481)
T 3f8u_A 350 NDGPVKVVVAENFDEIVN--NENKDVLIEFYAPWCGHCKNLEPKYKELGEKLSK 401 (481)
T ss_dssp CCSSSEEECTTTHHHHHT--CTTCEEEEEEECTTBHHHHHHHHHHHHHHHHTTT
T ss_pred CCCCeEEecccCHHHHhh--cCCCcEEEEEecCcChhHHHhhHHHHHHHHHhcc
Confidence 345788899999999886 5689999999999999999999999998877643
No 114
>3ul3_B Thioredoxin, thioredoxin-2; PTEX, oxidoreductase; 2.90A {Plasmodium falciparum}
Probab=98.29 E-value=2.4e-07 Score=77.82 Aligned_cols=33 Identities=18% Similarity=0.431 Sum_probs=30.4
Q ss_pred cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 370 HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 370 ~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..++++||.|||+||++|+.+.|.++++++.+.
T Consensus 40 ~~~k~vlv~F~a~wC~~C~~~~p~l~~~~~~~~ 72 (128)
T 3ul3_B 40 MKNTVIVLYFFAKWCQACTMQSTEMDKLQKYYG 72 (128)
T ss_dssp SCCSEEEEEEECTTCHHHHHHHHHHHHHHHHHG
T ss_pred ccCCEEEEEEECCCCHHHHHHhHHHHHHHHHhc
Confidence 478999999999999999999999999888775
No 115
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=98.29 E-value=5.2e-07 Score=75.06 Aligned_cols=49 Identities=12% Similarity=0.302 Sum_probs=39.7
Q ss_pred CCeEecCc-cchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 352 QNLVTLNR-TGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 352 ~~v~~l~~-~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
..+..++. ++|++++ +.++++||.||++||++|+.+.|.|+++++.+..
T Consensus 15 ~~~~~i~~~~~f~~~l---~~~k~vvv~f~a~~C~~C~~~~~~l~~l~~~~~~ 64 (121)
T 2j23_A 15 GSVQVISSYDQFKQVT---GGDKVVVIDFWATWCGPCKMIGPVFEKISDTPAG 64 (121)
T ss_dssp CCEEECCSHHHHHHHH---SSSSCEEEEEECTTCSTHHHHHHHHHHHHTSTHH
T ss_pred cceEEcCCHHHHHHHH---cCCCEEEEEEECCCCHhHHHHHHHHHHHHHHCcC
Confidence 34555554 7787766 4789999999999999999999999998777654
No 116
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=98.29 E-value=1.4e-06 Score=91.85 Aligned_cols=168 Identities=14% Similarity=0.183 Sum_probs=97.2
Q ss_pred CCcEEEEechHHHHHHH-HHHHhc-CCCeEEEEEeCCCCc-HHHHHHHHHHHHHh-CCcEEEEcCChHHHHHHHHhcCCC
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLT-GRPFRVFSLDTGRLN-PETYRFFDEVEKHF-GIRIEYMFPDAVEVQALVRSKGLF 187 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~-~~~i~VvflDTG~~f-pET~~~v~~l~~~~-gl~i~~~~P~~~~~~~~~~~~G~~ 187 (414)
++++++++|||.||+++ +|+.+. +.++..+|+|+|... .|..+.++.+++++ |++++++.-... +.. ...|..
T Consensus 255 ~~~vvvalSGGvDSsv~a~ll~~~~G~~v~~v~vd~g~~~~~e~~~~~~~~~~~l~gi~~~~vd~~~~-f~~--~l~g~~ 331 (556)
T 3uow_A 255 DHYVIAAMSGGIDSTVAAAYTHKIFKERFFGIFIDNGLLRKNEAENVYTFLKSTFPDMNITKIDASEN-FLS--NLQGVT 331 (556)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHHHGGGEEEEEEECSCSCTTHHHHHHHHHHHHCTTSEEEEEECHHH-HHH--HTTTCC
T ss_pred CceEEEEcccCCCHHHHHHHHHHHhCCeEEEEEEecCCCChHHHHHHHHHHHHhcCCCCeEEeccHHH-HHH--hhcCCC
Confidence 36799999999999875 777764 788999999999754 46677778899999 999988743221 111 122321
Q ss_pred CCCcccchhhhcchhchhHHHHhcc---C---cEEEecccccCCccCcCC---CCceecCCCCccccCCCCCeEEEEeCc
Q 015013 188 SFYEDGHQECCRVRKVRPLRRALKG---L---RAWITGQRKDQSPGTRSE---IPVVQVDPVFEGLEGGVGSLVKWNPVA 258 (414)
Q Consensus 188 ~~~~~~~~~Cc~~~Kv~Pl~ral~~---~---~~~itGiRrdES~~~Ra~---~~~~e~d~~~~~~~~~~~~~~ki~PL~ 258 (414)
-++..+..|+. ..++-+.+..+. . +...+|.-.++-...+.. ...+.......+.. ....+..+.||.
T Consensus 332 -~pe~kr~iig~-~f~~vf~~~A~~~~~~~~~~~la~Gt~y~D~ies~~~~g~~~~iks~~n~~gl~-~~~~~~li~PL~ 408 (556)
T 3uow_A 332 -DPEQKRKIIGK-LFIEEFEKAVNNIDIDINKTFLLQGTLYPDIIESKCSKNLSDTIKTHHNVGGLP-KNLKFKLFEPFK 408 (556)
T ss_dssp -CHHHHHHHHHH-HHHHHHHHHHHTTCCCGGGEEEECCCCHHHHHHHSCC--------------------CCCEEECTTT
T ss_pred -ChHHHHHHHHH-HHHHHHHHHHHHcCCcccccccccCccChHHHhhcccccccceecccccccccc-cccccceEeecc
Confidence 11111122222 223333443332 2 567788643322111110 00000000000000 011344689999
Q ss_pred cccHHHHHHHHHhCCCCCChhhhCCCC
Q 015013 259 NVKGNDIWNFLRTMDVPINSLHSQGYI 285 (414)
Q Consensus 259 dWt~~DVw~Yi~~~~lP~npLYd~Gy~ 285 (414)
+++++||..|-++.|||++-.+++=|+
T Consensus 409 ~l~K~EVr~la~~lGlp~~~~~r~P~p 435 (556)
T 3uow_A 409 YLFKDDVKTLSRELNLPEEITNRHPFP 435 (556)
T ss_dssp TCCHHHHHHHHHTTTCCHHHHHCCCCC
T ss_pred cCcHHHHHHHHHHcCCCHHHhCCCCCC
Confidence 999999999999999998888877443
No 117
>2kuc_A Putative disulphide-isomerase; structural genomics, thioredo PSI-2, protein structure initiative; NMR {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=5.2e-07 Score=75.36 Aligned_cols=50 Identities=8% Similarity=0.283 Sum_probs=38.2
Q ss_pred CeEecCccchHHHHhhh-cCCCcEEEEEeCCCChhhHhHHHHH---HHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLD-HRQEPWLVVLYAPWCQFCQVIDVFM---QIRFQIIA 402 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~-~~~~~vlV~FyApWC~~Ck~m~p~~---ee~~~i~a 402 (414)
..+.++..+|++.+.+. ..++++||.||++||++|+.+.|.+ +++.+.+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~ 60 (130)
T 2kuc_A 7 DGIAFRELSFPEALKRAEVEDKLLFVDCFTTWCGPCKRLSKVVFKDSLVADYFN 60 (130)
T ss_dssp CCCCCBCCCHHHHHHHHHHHSSCEEEEECCTTCTHHHHHHHHGGGCHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHHhcCCeEEEEEECCCCccHHHHHHHhcCcHHHHHHHh
Confidence 34566778887766432 3578999999999999999999998 66555543
No 118
>3qcp_A QSOX from trypanosoma brucei (tbqsox); ERV fold, thioredoxin fold, sulfhydryl oxidase, oxidoreducta; HET: FAD; 2.30A {Trypanosoma brucei} PDB: 3qd9_A*
Probab=98.28 E-value=3.4e-07 Score=94.50 Aligned_cols=51 Identities=18% Similarity=0.329 Sum_probs=43.6
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
...|+.++.++|+.++. .+..++|||+|||+||++|+.|.|.|+++++.+.
T Consensus 22 ~~~V~~Lt~~~F~~~l~-~~~~k~VlV~FyA~WC~pCk~~~P~l~~la~~~~ 72 (470)
T 3qcp_A 22 DSSVVDLSGDDFSRVHR-VAPLCPWIVLFYNDGCGACRRYASTFSKFAGGLK 72 (470)
T ss_dssp CTTEEECSCSCGGGTCT-TGGGSCEEEEEECTTCHHHHHHHHHHHHHHHTSC
T ss_pred CCCcEECCHHHHHHHHH-hCCCCeEEEEEECCCCHHHHHHHHHHHHHHHHHh
Confidence 46799999999998765 2345799999999999999999999999877664
No 119
>2yj7_A LPBCA thioredoxin; oxidoreductase; 1.65A {Synthetic construct}
Probab=97.57 E-value=1.2e-07 Score=75.45 Aligned_cols=47 Identities=21% Similarity=0.495 Sum_probs=40.0
Q ss_pred eEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.++.++|+..+. +.++++||.||++||++|+.+.|.++++++.+.
T Consensus 3 v~~l~~~~~~~~~~--~~~~~~~v~f~~~~C~~C~~~~~~~~~~~~~~~ 49 (106)
T 2yj7_A 3 VIEVTDENFEQEVL--KSDKPVLVDFWAPWCGPCRMIAPIIEELAKEYE 49 (106)
Confidence 56788888886553 578899999999999999999999999877765
No 120
>3iv4_A Putative oxidoreductase; APC23140, meticillin-resistant staphylococcus aureus, oxidor thioredoxin fold, structural genomics, PSI-2; HET: MSE; 1.50A {Staphylococcus aureus subsp}
Probab=98.23 E-value=5e-07 Score=75.57 Aligned_cols=44 Identities=9% Similarity=0.028 Sum_probs=36.8
Q ss_pred CeEec-CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 353 NLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 353 ~v~~l-~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
+...+ +.++|++++. .++++||+|+|+|||+|+++.|.|++.++
T Consensus 7 ~~~~i~s~e~f~~ii~---~~~~vvi~khatwCgpc~~~~~~~e~~~~ 51 (112)
T 3iv4_A 7 VAIKLSSIDQFEQVIE---ENKYVFVLKHSETCPISANAYDQFNKFLY 51 (112)
T ss_dssp CEEECCSHHHHHHHHH---HCSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred ceeecCCHHHHHHHHh---cCCCEEEEEECCcCHhHHHHHHHHHHHhc
Confidence 44555 5667888776 48999999999999999999999999776
No 121
>3fk8_A Disulphide isomerase; APC61824.1, xylella fastidiosa temecul structural genomics, PSI-2, protein structure initiative; 1.30A {Xylella fastidiosa}
Probab=98.21 E-value=8.4e-07 Score=74.60 Aligned_cols=34 Identities=29% Similarity=0.590 Sum_probs=30.3
Q ss_pred cCCCcEEEEEeCCCChhhHhHHHHHH--HHHHHHHH
Q 015013 370 HRQEPWLVVLYAPWCQFCQVIDVFMQ--IRFQIIAL 403 (414)
Q Consensus 370 ~~~~~vlV~FyApWC~~Ck~m~p~~e--e~~~i~a~ 403 (414)
..++++||.|||+||++|+.+.|.|+ ++.+.+..
T Consensus 27 ~~~k~vlv~f~a~wC~~C~~~~~~l~~~~~~~~~~~ 62 (133)
T 3fk8_A 27 RTHKPTLLVFGANWCTDCRALDKSLRNQKNTALIAK 62 (133)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHTSHHHHHHHHH
T ss_pred hcCCcEEEEEcCCCCHHHHHHHHHhCCHHHHHHhcC
Confidence 46899999999999999999999999 88877743
No 122
>3idv_A Protein disulfide-isomerase A4; thioredoxin-like fold, disulfide bond, endoplasmic reticulum isomerase, redox-active center; 1.95A {Homo sapiens} PDB: 2dj2_A
Probab=98.20 E-value=1.4e-06 Score=80.42 Aligned_cols=48 Identities=19% Similarity=0.460 Sum_probs=42.3
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+..++.++|+.++. .++++||.|||+||++|+.|.|.|+++++.+..
T Consensus 131 ~~~~~~~~~~~~~~~---~~~~~~v~f~a~wC~~C~~~~p~~~~~a~~~~~ 178 (241)
T 3idv_A 131 VTLVLTKENFDEVVN---DADIILVEFYAPWCGHCKKLAPEYEKAAKELSK 178 (241)
T ss_dssp SSEECCTTTHHHHHH---HCSEEEEEEECTTCTGGGGTHHHHHHHHHHHHT
T ss_pred cceeccHHHHHHhhc---cCCeEEEEEECCCCHHHHHhHHHHHHHHHHHhc
Confidence 567889999998875 568999999999999999999999998888754
No 123
>1sen_A Thioredoxin-like protein P19; endoplasmic reticulum, RP19, structural genomics, PSI, protein structure initiative; 1.20A {Homo sapiens} SCOP: c.47.1.1 PDB: 2k8v_A
Probab=98.20 E-value=8.4e-07 Score=78.38 Aligned_cols=34 Identities=21% Similarity=0.490 Sum_probs=29.6
Q ss_pred cCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 370 HRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 370 ~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
..+++|||+|||+||++|+.+.|.|+++.+....
T Consensus 44 ~~~k~vlv~F~a~WC~~C~~~~p~l~~~~~~~~~ 77 (164)
T 1sen_A 44 ASGLPLMVIIHKSWCGACKALKPKFAESTEISEL 77 (164)
T ss_dssp HHTCCEEEEEECTTCHHHHHHHHHHHTCHHHHHH
T ss_pred hcCCeEEEEEECCCCHHHHHHHHHHHHHHHHhhc
Confidence 4789999999999999999999999997666543
No 124
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=98.20 E-value=1.2e-06 Score=87.39 Aligned_cols=49 Identities=10% Similarity=0.179 Sum_probs=39.9
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHH------HHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVID------VFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~------p~~ee~~~i~a 402 (414)
.+.|+.|+.++|+.++. .+++|||+||||||++|+... |.|+++++.+.
T Consensus 12 ~~~v~~lt~~~f~~~i~---~~~~vlV~FyApWC~~~~~~~~l~~~~p~~e~~a~~~~ 66 (367)
T 3us3_A 12 VDRVINVNAKNYKNVFK---KYEVLALLYHEPPEDDKASQRQFEMEELILELAAQVLE 66 (367)
T ss_dssp CCCCEECCTTTHHHHHH---HCSEEEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccEECCHHHHHHHHh---hCCeEEEEEECCCchhHHHhhhhccccHHHHHHHHHhh
Confidence 35799999999999885 679999999999999974333 68888777664
No 125
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=98.20 E-value=7.2e-07 Score=88.12 Aligned_cols=47 Identities=9% Similarity=0.183 Sum_probs=39.4
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHH-------HHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVF-------MQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~-------~ee~~~i~a 402 (414)
+.|+.|+.++|+.++. .+++|||+||||||+ |+.+.|. |+++++.+.
T Consensus 11 ~~v~~l~~~~f~~~i~---~~~~~lV~F~a~wC~-c~~~~p~~~~~~~~~~~~a~~~~ 64 (350)
T 1sji_A 11 DRVVSLTEKNFKQVLK---KYDVLCLYYHESVSS-DKVAQKQFQLKEIVLELVAQVLE 64 (350)
T ss_dssp CCCEEECHHHHHHHHT---TCSEEEEEEECCSCS-SSTTSHHHHHHHHHHHHHHHHGG
T ss_pred CccEECCHHHHHHHHh---hCCeEEEEEECCCCc-chhhCchhhhhhHHHHHHHHHHh
Confidence 5689999999999775 678999999999999 9999888 666555553
No 126
>3f9u_A Putative exported cytochrome C biogenesis-related; exported cytochrome C biogenesis-related protein, bacteroide fragilis; 2.20A {Bacteroides fragilis nctc 9343}
Probab=98.19 E-value=1.3e-06 Score=76.90 Aligned_cols=49 Identities=12% Similarity=0.141 Sum_probs=34.8
Q ss_pred eEecCccchHHHHhh-hcCCCcEEEEEeCCCChhhHhHHHHH---HHHHHHHH
Q 015013 354 LVTLNRTGMENLARL-DHRQEPWLVVLYAPWCQFCQVIDVFM---QIRFQIIA 402 (414)
Q Consensus 354 v~~l~~~~~e~~v~~-~~~~~~vlV~FyApWC~~Ck~m~p~~---ee~~~i~a 402 (414)
....+..+|++.+.+ ...+++|||+|||+||++|+.|++.+ .++.+.+.
T Consensus 28 ~~~~~~~~~~~~~~~a~~~gk~vlv~F~A~WC~~C~~~~~~~~~~~~~~~~~~ 80 (172)
T 3f9u_A 28 EVHAKFDDYDLGMEYARQHNKPVMLDFTGYGCVNCRKMELAVWTDPKVSSIIN 80 (172)
T ss_dssp CCCCCBSCHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTTSHHHHHHHH
T ss_pred ccccchhhHHHHHHHHHHcCCeEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc
Confidence 345566777765532 34789999999999999999985554 55554444
No 127
>3ph9_A Anterior gradient protein 3 homolog; thioredoxin fold, protein disulfide isomerase, endoplasmic R isomerase; 1.83A {Homo sapiens} SCOP: c.47.1.0 PDB: 2lns_A 2lnt_A
Probab=98.18 E-value=9.7e-07 Score=77.62 Aligned_cols=31 Identities=16% Similarity=0.332 Sum_probs=27.2
Q ss_pred hcCCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 369 DHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 369 ~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
...+++|||+|||+||++|+.|.|.+.+..+
T Consensus 41 ~~~~KpVlV~F~A~WC~~Ck~m~p~~~~~~~ 71 (151)
T 3ph9_A 41 QKSKKPLMVIHHLEDCQYSQALKKVFAQNEE 71 (151)
T ss_dssp HHHTCCEEEEECCTTCHHHHHHHHHHHHCHH
T ss_pred HHcCCcEEEEEECCCCHhHHHHHHHHhcCHH
Confidence 3578999999999999999999999987543
No 128
>3kp8_A Vkorc1/thioredoxin domain protein; blood coagulation, disulfide formation, redox partner, oxidoreductase; 1.66A {Synechococcus SP}
Probab=98.18 E-value=1.4e-07 Score=77.83 Aligned_cols=31 Identities=19% Similarity=0.330 Sum_probs=26.7
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||+||||||++|+.|.|.|+++++.+
T Consensus 11 ~~k~~vV~F~A~WC~~C~~~~p~~~~~a~~~ 41 (106)
T 3kp8_A 11 LRQIGGTMYGAYWCPHCQDQKELFGAAFDQV 41 (106)
T ss_dssp HHHHTCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred cCCCEEEEEECCCCHHHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999876544
No 129
>1wou_A Thioredoxin -related protein, 14 kDa; electron transport; 1.80A {Homo sapiens} SCOP: c.47.1.16 PDB: 1v9w_A
Probab=98.17 E-value=1.2e-06 Score=73.24 Aligned_cols=48 Identities=10% Similarity=0.277 Sum_probs=39.3
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCC-------CChhhHhHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAP-------WCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyAp-------WC~~Ck~m~p~~ee~~~i~ 401 (414)
.+...+.++|+..+. ...++++||.|||+ ||++|+.+.|.|+++++.+
T Consensus 6 ~v~~~~~~~~~~~~~-~~~~~~v~v~F~a~~~~~~~~wC~~C~~~~p~l~~~~~~~ 60 (123)
T 1wou_A 6 EVSVSGFEEFHRAVE-QHNGKTIFAYFTGSKDAGGKSWCPDCVQAEPVVREGLKHI 60 (123)
T ss_dssp EEEEESHHHHHHHHH-TTTTSEEEEEEECCBCTTCCBSCHHHHHHHHHHHHHGGGC
T ss_pred eEEeccHHHHHHHHH-HhCCCEEEEEEEccCCCCCCCcCHHHHHhhHHHHHHHHHc
Confidence 355667888888776 12589999999999 9999999999999977655
No 130
>2fwh_A Thiol:disulfide interchange protein DSBD; thioredoxin-like, C-terminal domain, reduced form at PH7, oxidoreductase; 0.99A {Escherichia coli} SCOP: c.47.1.1 PDB: 2fwe_A 2fwf_A 2fwg_A 1vrs_D 1uc7_A
Probab=98.15 E-value=7.1e-07 Score=75.68 Aligned_cols=45 Identities=18% Similarity=0.400 Sum_probs=34.7
Q ss_pred cCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHH---HHHHHHHH
Q 015013 357 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFM---QIRFQIIA 402 (414)
Q Consensus 357 l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~---ee~~~i~a 402 (414)
.+.++++..+.. ..++++||.|||+||++|+.|.|.+ +++.+.+.
T Consensus 17 ~~~~~~~~~l~~-~~~k~vlv~F~a~wC~~C~~~~~~~~~~~~l~~~~~ 64 (134)
T 2fwh_A 17 KTVDELNQALVE-AKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALA 64 (134)
T ss_dssp CSHHHHHHHHHH-HTTSCEEEEEECTTCHHHHHHHHHTTTSHHHHHHTT
T ss_pred cCHHHHHHHHHH-hcCCcEEEEEECCCCHHHHHHHHHhcCCHHHHHHhc
Confidence 345666665542 2488999999999999999999998 77766653
No 131
>1wmj_A Thioredoxin H-type; structural genomics, program for RICE genome research, oxidoreductase; NMR {Oryza sativa}
Probab=98.15 E-value=3.6e-07 Score=76.10 Aligned_cols=52 Identities=12% Similarity=0.254 Sum_probs=41.2
Q ss_pred CCCeEec-CccchHHHHhh-hcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTL-NRTGMENLARL-DHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l-~~~~~e~~v~~-~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+.++.+ +.++|++.+.. ...++++||.||++||++|+.+.|.|+++++.+.
T Consensus 13 ~~~~~~i~~~~~~~~~l~~~~~~~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 66 (130)
T 1wmj_A 13 EGVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFP 66 (130)
T ss_dssp CSSSBCCSSSHHHHHHHHHHHTTTCBCBEECCSSSCSCSSSSHHHHHHHHHHCT
T ss_pred CcceEEcCCHHHHHHHHHHHhhcCCEEEEEEECCCChhHHHHHHHHHHHHHHCC
Confidence 3566777 45788877763 2257899999999999999999999999877653
No 132
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=98.13 E-value=1.5e-06 Score=94.75 Aligned_cols=49 Identities=16% Similarity=0.303 Sum_probs=44.1
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
...|+.++.++|+..+. .+++|||.||||||++|+.|.|.|+++++.+.
T Consensus 115 ~~~v~~l~~~~f~~~i~---~~~~~lv~Fya~wC~~C~~~~p~~~~~a~~~~ 163 (780)
T 3apo_A 115 DPEIITLERREFDAAVN---SGELWFVNFYSPGSSHSHDLAPTWREFAKEVD 163 (780)
T ss_dssp CTTEEECCHHHHHHHHT---SSSCEEEEEECSSCHHHHHHHHHHHHHHHHTT
T ss_pred CcceeeechHhHHhhhc---CCCcEEEEEeCCCCcchhHhhHHHHHHHHHhc
Confidence 45799999999999884 78999999999999999999999999887764
No 133
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=98.10 E-value=7.5e-06 Score=88.47 Aligned_cols=59 Identities=15% Similarity=0.293 Sum_probs=49.9
Q ss_pred CcEEEEechHHHHHHH-HHHHhc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMF 171 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~-~-~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~ 171 (414)
+++++++|||.||+++ +|+.+. + .++..+|+|.|.......+.++++++++|++++++.
T Consensus 241 ~~vvv~lSGGvDSsVla~Ll~~alG~~~V~aV~vd~g~~~~~e~e~a~~~a~~lGI~~~vvd 302 (697)
T 2vxo_A 241 SKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVIN 302 (697)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHSCGGGEEEEEEECSCCCSSTTHHHHHHHHHTTCCEEEEE
T ss_pred cceEEEccCchHHHHHHHHHHHhcCCceEEEEEeccccCCcchHHHHHHHHHHhCCcEEEec
Confidence 6799999999999875 777775 6 689999999997655567889999999999988774
No 134
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=98.07 E-value=2.8e-06 Score=77.84 Aligned_cols=45 Identities=11% Similarity=0.189 Sum_probs=37.1
Q ss_pred EecCccchHHHHhhhcCCCcE-EEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 355 VTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 355 ~~l~~~~~e~~v~~~~~~~~v-lV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..++.++++.+.. .++++ ||.|||+||++|+.+.|.|+++++.+.
T Consensus 119 ~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~p~~~~l~~~~~ 164 (226)
T 1a8l_A 119 TNLMDETKQAIRN---IDQDVRILVFVTPTCPYCPLAVRMAHKFAIENT 164 (226)
T ss_dssp CCCCHHHHHHHTT---CCSCEEEEEEECSSCTTHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHh---cCCCcEEEEEeCCCCCccHHHHHHHHHHHHhcc
Confidence 4567777877653 55666 999999999999999999999888775
No 135
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=98.03 E-value=8.4e-06 Score=82.84 Aligned_cols=149 Identities=14% Similarity=0.207 Sum_probs=88.3
Q ss_pred HcCCcEEEEechHHHHHH-HHHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEEEcCChHHHHH----HHHh
Q 015013 110 KFGNDIAIAFSGAEDVAL-IEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEYMFPDAVEVQA----LVRS 183 (414)
Q Consensus 110 ~~~~~i~vafSGGKDSvl-L~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl-~i~~~~P~~~~~~~----~~~~ 183 (414)
+..++++|+||||-||++ +.++.+.+.++..+++|.|.. +=++.++++++++|+ +++++.-.....++ .+..
T Consensus 12 ~~~~KVVVA~SGGlDSSv~a~~Lke~G~eViavt~d~Gq~--~Ele~A~~vA~~lGi~~~~VvDl~eef~~~v~~p~i~~ 89 (421)
T 1vl2_A 12 HMKEKVVLAYSGGLDTSVILKWLCEKGFDVIAYVANVGQK--DDFVAIKEKALKTGASKVYVEDLRREFVTDYIFTALLG 89 (421)
T ss_dssp --CCEEEEECCSSHHHHHHHHHHHHTTCEEEEEEEESSCC--CCHHHHHHHHHHHTCSEEEEEECHHHHHHHTHHHHHTT
T ss_pred cccCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEEEcCCH--HHHHHHHHHHHHcCCceEEEEecHHHHHHhhhhHHHhc
Confidence 345789999999999976 478888888899999999963 336789999999999 77776332111111 1111
Q ss_pred cCCCCCCcc-------cchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEE
Q 015013 184 KGLFSFYED-------GHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKW 254 (414)
Q Consensus 184 ~G~~~~~~~-------~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki 254 (414)
+ .+++. ..+.|+ ..-+.++.+ |.+.+++|.-.......|........+ +.+--+
T Consensus 90 -n--a~yeg~Y~~g~~l~Rp~i----~~~l~~~A~~~Gad~IA~G~~~kgnDq~rf~~~~~al~----------p~~~Ii 152 (421)
T 1vl2_A 90 -N--AMYEGRYLLGTAIARPLI----AKRQVEIAEKEGAQYVAHGATGKGNDQVRFELTYAALN----------PNLKVI 152 (421)
T ss_dssp -T--CCBTTTBCCHHHHHHHHH----HHHHHHHHHHHTCSEEECCCCTTSSHHHHHHHHHHHHC----------TTSEEE
T ss_pred -C--CcccCceeCCCcccHHHH----HHHHHHHHHHcCCCEEEECCeeCCCChHHHHHHHHhcC----------CCCeEE
Confidence 1 11110 012222 111222222 678999998752111012111111111 123457
Q ss_pred EeCcc-------ccHHHHHHHHHhCCCCCC
Q 015013 255 NPVAN-------VKGNDIWNFLRTMDVPIN 277 (414)
Q Consensus 255 ~PL~d-------Wt~~DVw~Yi~~~~lP~n 277 (414)
.|+.+ ++++||.+|.+++|||+.
T Consensus 153 aPl~d~~~l~~~lsK~Eir~~A~e~Glp~~ 182 (421)
T 1vl2_A 153 SPWKDPEFLAKFKGRTDLINYAMEKGIPIK 182 (421)
T ss_dssp CGGGCHHHHHHTC--CHHHHHHHHHTCCCC
T ss_pred cccCchhhccccCCHHHHHHHHHHcCCCcc
Confidence 89999 599999999999999985
No 136
>2es7_A Q8ZP25_salty, putative thiol-disulfide isomerase and thioredoxi; structural genomics, PSI, protein structure initiative; 2.80A {Salmonella typhimurium} SCOP: c.47.1.20 PDB: 2gzp_A 2jzt_A
Probab=97.94 E-value=1.9e-06 Score=74.71 Aligned_cols=46 Identities=7% Similarity=0.030 Sum_probs=29.5
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCC--ChhhHhHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPW--CQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApW--C~~Ck~m~p~~ee~~~i~ 401 (414)
.+..++.++|++++. .++.+||.||++| |++|+.|.|.|+++++.+
T Consensus 18 ~~~~l~~~~f~~~i~---~~~~~vv~f~~~~~~C~~C~~l~P~l~~la~~~ 65 (142)
T 2es7_A 18 GWQPVEASTVDDWIK---RVGDGVILLSSDPRRTPEVSDNPVMIAELLREF 65 (142)
T ss_dssp TCEECCCC-----------CCSEEEEECCCSCC----CCHHHHHHHHHHTC
T ss_pred cCcccccccHHHHHH---hCCCEEEEEECCCCCCccHHHHHHHHHHHHHHh
Confidence 678899999999875 5567899999988 999999999999987765
No 137
>2lst_A Thioredoxin; structural genomics, NEW YORK structural genomics research consortium, oxidoreductase; NMR {Thermus thermophilus}
Probab=97.16 E-value=1.3e-06 Score=73.01 Aligned_cols=34 Identities=15% Similarity=0.371 Sum_probs=29.0
Q ss_pred cCCCcEEEEEeCCCChhhHhHHHHH---HHHHHHHHH
Q 015013 370 HRQEPWLVVLYAPWCQFCQVIDVFM---QIRFQIIAL 403 (414)
Q Consensus 370 ~~~~~vlV~FyApWC~~Ck~m~p~~---ee~~~i~a~ 403 (414)
..++++||.|||+||++|+.+.|.+ +++.+.+..
T Consensus 17 ~~~k~vlv~f~a~wC~~C~~~~~~~~~~~~~~~~~~~ 53 (130)
T 2lst_A 17 AHGRMVMVYFHSEHCPYCQQMNTFVLSDPGVSRLLEA 53 (130)
Confidence 4678999999999999999999999 777665543
No 138
>3lwa_A Secreted thiol-disulfide isomerase; thioredoxin, PSI, MCSG, structural genomics, midwest center for structural genomics; 1.75A {Corynebacterium glutamicum}
Probab=97.91 E-value=7.4e-06 Score=72.57 Aligned_cols=34 Identities=15% Similarity=0.350 Sum_probs=31.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHHh
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIALV 404 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~~ 404 (414)
.++++||.||++||++|+.+.|.|+++.+.+...
T Consensus 58 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~~ 91 (183)
T 3lwa_A 58 ENQVVILNAWGQWCAPCRSESDDLQIIHEELQAA 91 (183)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEECCcCHhHHHHHHHHHHHHHHHHhc
Confidence 5689999999999999999999999999988764
No 139
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=97.90 E-value=7e-06 Score=75.53 Aligned_cols=45 Identities=18% Similarity=0.160 Sum_probs=36.6
Q ss_pred eEecCccchHHHHhhhcCCCcE-EEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 354 LVTLNRTGMENLARLDHRQEPW-LVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 354 v~~l~~~~~e~~v~~~~~~~~v-lV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+..++.++|+.++. .++++ ||.|||+||++|+.+.|.|+++++.+
T Consensus 120 ~~~l~~~~~~~~~~---~~~~~~~v~F~a~wC~~C~~~~~~~~~~~~~~ 165 (229)
T 2ywm_A 120 KPQLSEKTLELLQV---VDIPIEIWVFVTTSCGYCPSAAVMAWDFALAN 165 (229)
T ss_dssp CCSCCHHHHHHHTT---CCSCEEEEEEECTTCTTHHHHHHHHHHHHHHC
T ss_pred ccCCCHHHHHHHHh---cCCCeEEEEEECCCCcchHHHHHHHHHHHHHC
Confidence 46678888888664 45555 88999999999999999999977664
No 140
>2h30_A Thioredoxin, peptide methionine sulfoxide reductase MSRA/MSRB; reduced, thiol-disulfide exchange, oxidoreductase; 1.60A {Neisseria gonorrhoeae} PDB: 2jzr_A 2jzs_A 2k9f_A 2fy6_A
Probab=97.90 E-value=5.1e-06 Score=71.73 Aligned_cols=46 Identities=17% Similarity=0.274 Sum_probs=35.6
Q ss_pred CeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 353 NLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 353 ~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.+..++.+.+... ...++++||.|||+||++|+.+.|.|+++++.+
T Consensus 22 ~l~~~~g~~~~~~---~~~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~ 67 (164)
T 2h30_A 22 TMKTADNRPASVY---LKKDKPTLIKFWASWCPLCLSELGQAEKWAQDA 67 (164)
T ss_dssp TCEETTSSBGGGG---CCTTSCEEEEECCTTCHHHHHHHHHHHHHHTCG
T ss_pred ccCCCCCCEeeHH---HhCCCEEEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 4556666555432 236789999999999999999999999987764
No 141
>1fo5_A Thioredoxin; disulfide oxidoreductase, structural genomics, BSGC structure funded by NIH, protein structure initiative, PSI; NMR {Methanocaldococcus jannaschii} SCOP: c.47.1.1
Probab=97.88 E-value=5.7e-06 Score=63.38 Aligned_cols=31 Identities=10% Similarity=0.261 Sum_probs=27.0
Q ss_pred CCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..++||.||++||++|+.+.|.++++++.+.
T Consensus 2 ~~~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 32 (85)
T 1fo5_A 2 SKVKIELFTSPMCPHCPAAKRVVEEVANEMP 32 (85)
T ss_dssp CCEEEEEEECCCSSCCCTHHHHHHHHHHHCS
T ss_pred CceEEEEEeCCCCCchHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999777653
No 142
>1i5g_A Tryparedoxin II; electron transport; HET: TS5; 1.40A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1o6j_A 1o81_A 1oc8_A 1oc9_B 1fg4_A 1oc9_A
Probab=97.86 E-value=1.2e-05 Score=68.17 Aligned_cols=32 Identities=13% Similarity=0.219 Sum_probs=29.4
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|||+||++|+.+.|.++++++.+.
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~ 58 (144)
T 1i5g_A 27 AGKTVFFYFSASWCPPSRAFTPQLIDFYKAHA 58 (144)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999888775
No 143
>3eur_A Uncharacterized protein; PSI2,MCSG, conserved protein, structural genomics, protein S initiative, midwest center for structural genomics; HET: MSE; 1.30A {Bacteroides fragilis}
Probab=97.86 E-value=1.1e-05 Score=68.27 Aligned_cols=32 Identities=19% Similarity=0.186 Sum_probs=29.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHH---HHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQI---RFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee---~~~i~a 402 (414)
.++++||.|||+||++|+.+.|.+.+ +.+.+.
T Consensus 30 ~gk~vll~F~a~wC~~C~~~~~~l~~~~~l~~~~~ 64 (142)
T 3eur_A 30 PAEYTLLFINNPGCHACAEMIEGLKASPVINGFTA 64 (142)
T ss_dssp CCSEEEEEECCSSSHHHHHHHHHHHHCHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHhhhHHHHHHhc
Confidence 46899999999999999999999999 888774
No 144
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=97.86 E-value=1.1e-05 Score=75.81 Aligned_cols=43 Identities=14% Similarity=0.264 Sum_probs=33.4
Q ss_pred cCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 357 LNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 357 l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+++++++.+.. ..++.+|+.||||||++|+.+.|.|+++++.+
T Consensus 125 l~~~~~~~~~~--~~~~~~vv~F~a~wC~~C~~~~p~l~~la~~~ 167 (243)
T 2hls_A 125 LEDATKEALKS--LKGRVHIETIITPSCPYCPYAVLLAHMFAYEA 167 (243)
T ss_dssp CCHHHHHHHHH--CCSCEEEEEEECSSCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHH--cCCCcEEEEEECCCCCCcHHHHHHHHHHHHHc
Confidence 44455555543 24567799999999999999999999988776
No 145
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=97.85 E-value=8.7e-06 Score=69.70 Aligned_cols=31 Identities=23% Similarity=0.434 Sum_probs=28.5
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.|||+||++|+.+.|.++++++.+
T Consensus 23 ~gk~vlv~F~a~wC~~C~~~~~~l~~l~~~~ 53 (151)
T 3raz_A 23 KAPVRIVNLWATWCGPCRKEMPAMSKWYKAQ 53 (151)
T ss_dssp CSSEEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999987766
No 146
>1lu4_A Soluble secreted antigen MPT53; thioredoxin-like fold, structural genomics, PSI, protein structure initiative; 1.12A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=97.82 E-value=8.6e-06 Score=67.66 Aligned_cols=32 Identities=19% Similarity=0.537 Sum_probs=28.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 23 ~~k~~lv~f~~~~C~~C~~~~~~l~~~~~~~~ 54 (136)
T 1lu4_A 23 QGKPAVLWFWTPWCPFCNAEAPSLSQVAAANP 54 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHCC
Confidence 56899999999999999999999999877663
No 147
>3ira_A Conserved protein; methanosarcina mazei,structural genomics, MCSG, protein structure initiative, midwest center for STRU genomics; 2.10A {Methanosarcina mazei}
Probab=97.82 E-value=9.2e-06 Score=73.01 Aligned_cols=42 Identities=10% Similarity=0.302 Sum_probs=30.9
Q ss_pred CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHH-HH--HHHHHHHH
Q 015013 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDV-FM--QIRFQIIA 402 (414)
Q Consensus 358 ~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p-~~--ee~~~i~a 402 (414)
.++.|+... ..+++|||+|||+||++|+.|+| .| ++.++.+.
T Consensus 28 ~~ea~~~A~---~~~KpVlvdF~A~WC~~Ck~m~~~~f~~~~va~~l~ 72 (173)
T 3ira_A 28 GEEAFEKAR---KENKPVFLSIGYSTCHWCHMMAHESFEDEEVAGLMN 72 (173)
T ss_dssp SHHHHHHHH---HHTCCEEEEEECTTCHHHHHHHHHTTTCHHHHHHHH
T ss_pred CHHHHHHHH---HhCCCEEEecccchhHhhccccccccCCHHHHHHHH
Confidence 345555544 47899999999999999999999 44 34455443
No 148
>3s9f_A Tryparedoxin; thioredoxin fold, disulfide reductase, electron transport; 1.80A {Leishmania major}
Probab=97.82 E-value=1.4e-05 Score=70.11 Aligned_cols=33 Identities=12% Similarity=0.229 Sum_probs=30.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|||+||++|+.+.|.++++++.+..
T Consensus 47 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~~ 79 (165)
T 3s9f_A 47 SGKTVFFYFSASWCPPCRGFTPQLVEFYEKHHD 79 (165)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCcChhHHHHHHHHHHHHHHhcc
Confidence 568999999999999999999999998888753
No 149
>2c0g_A ERP29 homolog, windbeutel protein; PDI-dbeta, PDI, protein disulfide isomerase, PIPE, dorsal-ventral patterning, chaperone, WIND mutants; 1.75A {Drosophila melanogaster} SCOP: a.71.1.1 c.47.1.7 PDB: 1ovn_A 2c0f_A 2c1y_A 2c0e_A
Probab=97.81 E-value=2.3e-05 Score=74.37 Aligned_cols=45 Identities=13% Similarity=0.065 Sum_probs=39.6
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEe--CCCChhhHhHHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLY--APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~Fy--ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
..|+.++.++|+.++. .+++|||+|| ||||+ |.|.|+++++.++.
T Consensus 16 ~~v~~Lt~~nF~~vi~---~~~~vlV~Fy~~ApWCg----l~P~~e~lA~~~~~ 62 (248)
T 2c0g_A 16 TGCVDLDELSFEKTVE---RFPYSVVKFDIASPYGE----KHEAFTAFSKSAHK 62 (248)
T ss_dssp TTCEECCTTTHHHHHT---TSSEEEEEEEESSCCSH----HHHHHHHHHHHHHH
T ss_pred CCcEECCHHHHHHHHh---cCCCEEEEEECCCCCCc----cHHHHHHHHHHHhc
Confidence 4688999999999663 7789999999 99999 99999999888764
No 150
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.81 E-value=2.6e-05 Score=82.73 Aligned_cols=153 Identities=18% Similarity=0.169 Sum_probs=92.8
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhc-C-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-G-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 177 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~-~-~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~ 177 (414)
..|+..+++.+ ++++|++|||.||+++ .|+.+. + .++..++++++...+++++.++++++++|++++++. -...+
T Consensus 315 ~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~~alG~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i~-i~~~~ 393 (590)
T 3n05_A 315 VGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKYSSDHSKGDAAELARRTGLNFRTVS-IEPMF 393 (590)
T ss_dssp HHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSSCCHHHHHHHHHHHHHHTCEEEECC-SHHHH
T ss_pred HHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHHHHhCcccEEEEEECCCCCCHHHHHHHHHHHHHcCCcEEEEE-ChHHH
Confidence 44555555544 5799999999999875 677664 6 679999999998889999999999999999987763 22223
Q ss_pred HHHHHhcCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEEE
Q 015013 178 QALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWN 255 (414)
Q Consensus 178 ~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~ 255 (414)
..+........+...+ .....+..-+..+.. +..++.|| .++|.. . .......| ...-++
T Consensus 394 ~~~~~~l~~~~~~~~n---~~ar~r~~~l~~~A~~~g~~vl~TG-n~se~~-~--Gy~t~~gd-----------~~~~~~ 455 (590)
T 3n05_A 394 DAYMASLGLTGLAEEN---LQSRLRGTTLMAISNQEGHIVLAPG-NKSELA-V--GYSTLYGD-----------SVGAYG 455 (590)
T ss_dssp HHHHHHHCCCTHHHHH---HHHHHHHHHHHHHHHHHTCEEBCCC-CHHHHH-H--TCCCSSCT-----------TSCSBC
T ss_pred HHHHHHhcccchhhhH---HHHHHHHHHHHHHHHhcCCEEEeCC-CHHHHh-c--CchhhcCC-----------Ccccee
Confidence 3333222211000000 001112222222222 45677788 455542 1 11100001 112379
Q ss_pred eCccccHHHHHHHHHhCC
Q 015013 256 PVANVKGNDIWNFLRTMD 273 (414)
Q Consensus 256 PL~dWt~~DVw~Yi~~~~ 273 (414)
||.++++.||....+..|
T Consensus 456 Pl~~l~K~eVr~la~~lg 473 (590)
T 3n05_A 456 PIKDVYKTSIFRLAEWRN 473 (590)
T ss_dssp TTTTSCHHHHHHHHHHHH
T ss_pred ecCCCcHHHHHHHHHHhC
Confidence 999999999999998876
No 151
>1o8x_A Tryparedoxin, TRYX, TXNI; tryparedoxin-I, synchrotron radiation, disulfide bonds tryparedoxin, thioredoxin, trypanosome; 1.3A {Crithidia fasciculata} SCOP: c.47.1.10 PDB: 1okd_A 1qk8_A 1o85_A 1o8w_A 1o7u_A 1ezk_A 1ewx_A
Probab=97.81 E-value=1.6e-05 Score=67.61 Aligned_cols=32 Identities=9% Similarity=0.155 Sum_probs=29.3
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|||+||++|+.+.|.++++++.+.
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~p~l~~l~~~~~ 58 (146)
T 1o8x_A 27 AGKLVFFYFSASWCPPARGFTPQLIEFYDKFH 58 (146)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEccCCHHHHHHHHHHHHHHHHhh
Confidence 56899999999999999999999999888775
No 152
>2djk_A PDI, protein disulfide-isomerase; thioredoxin fold; NMR {Humicola insolens} SCOP: c.47.1.2 PDB: 2kp2_A
Probab=97.80 E-value=8.9e-06 Score=69.02 Aligned_cols=47 Identities=2% Similarity=-0.067 Sum_probs=40.3
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|+.++.++|+.+.. .+.+|+|.|||+ |++|+.|.|.|+++++.+.
T Consensus 6 plv~~~t~~~f~~~~~---~~~pv~v~f~a~-~~~c~~~~p~l~~~A~~~~ 52 (133)
T 2djk_A 6 PLIGEIGPETYSDYMS---AGIPLAYIFAET-AEERKELSDKLKPIAEAQR 52 (133)
T ss_dssp CCSEECCHHHHHHHHH---TTSCEEEEECSC-SSSHHHHHHHHHHHHHSST
T ss_pred CceeccChHHHHHHhc---CCCCEEEEEecC-hhhHHHHHHHHHHHHHHhC
Confidence 3478899999998754 788999999999 8999999999999877664
No 153
>1zzo_A RV1677; thioredoxin fold, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.60A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 3ios_A
Probab=97.79 E-value=1e-05 Score=66.88 Aligned_cols=32 Identities=22% Similarity=0.408 Sum_probs=28.6
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 24 ~~k~~ll~f~~~~C~~C~~~~~~l~~~~~~~~ 55 (136)
T 1zzo_A 24 LGKPAVLWFWAPWCPTCQGEAPVVGQVAASHP 55 (136)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCeEEEEEEcCCChhHHHHHHHHHHHHHHcC
Confidence 56899999999999999999999999877653
No 154
>2b5x_A YKUV protein, TRXY; thioredoxin-like, oxidoreductase; NMR {Bacillus subtilis} SCOP: c.47.1.10 PDB: 2b5y_A
Probab=97.79 E-value=2.8e-05 Score=65.33 Aligned_cols=44 Identities=14% Similarity=0.129 Sum_probs=34.5
Q ss_pred ecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 356 TLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 356 ~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++.+.+..-. ..++++||.||++||++|+.+.|.++++.+.+.
T Consensus 16 ~~~g~~~~~~~---~~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~ 59 (148)
T 2b5x_A 16 WLNGEVTREQL---IGEKPTLIHFWSISCHLCKEAMPQVNEFRDKYQ 59 (148)
T ss_dssp EESCCCCHHHH---TTTSCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred cccCcccchhh---cCCCEEEEEEEcCCCHHHHHHhHHHHHHHHHhc
Confidence 45555554322 267899999999999999999999999887764
No 155
>1o73_A Tryparedoxin; electron transport, trypanosomatid, thioredoxin; 2.28A {Trypanosoma brucei brucei} SCOP: c.47.1.10
Probab=97.79 E-value=1.8e-05 Score=66.77 Aligned_cols=32 Identities=13% Similarity=0.318 Sum_probs=29.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|||+||++|+.+.|.++++++.+.
T Consensus 27 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~ 58 (144)
T 1o73_A 27 VGKTVFLYFSASWCPPCRGFTPVLAEFYEKHH 58 (144)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECcCCHHHHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999888774
No 156
>1ilo_A Conserved hypothetical protein MTH895; beta-alpha-beta-alpha-beta-BETA-alpha motif, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus str} SCOP: c.47.1.1
Probab=97.78 E-value=1.4e-05 Score=60.33 Aligned_cols=28 Identities=14% Similarity=0.360 Sum_probs=24.3
Q ss_pred EEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|+|||+||++|+.+.|.++++++.+.
T Consensus 2 ~~v~f~a~wC~~C~~~~~~l~~~~~~~~ 29 (77)
T 1ilo_A 2 MKIQIYGTGCANCQMLEKNAREAVKELG 29 (77)
T ss_dssp EEEEEECSSSSTTHHHHHHHHHHHHHTT
T ss_pred cEEEEEcCCChhHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999776653
No 157
>3or5_A Thiol:disulfide interchange protein, thioredoxin protein; PSI-II, structural genomics, protein structure initiative; 1.66A {Chlorobaculum tepidum} SCOP: c.47.1.0
Probab=97.77 E-value=1.6e-05 Score=68.43 Aligned_cols=32 Identities=22% Similarity=0.414 Sum_probs=29.4
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 33 ~gk~vlv~f~~~~C~~C~~~~~~l~~l~~~~~ 64 (165)
T 3or5_A 33 KGKAYIVNFFATWCPPCRSEIPDMVQVQKTWA 64 (165)
T ss_dssp TTCEEEEEEECTTSHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999888775
No 158
>1nho_A Probable thioredoxin; beta sheet, alpha helix, oxidoreductase; NMR {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.47.1.1
Probab=97.76 E-value=9e-06 Score=62.26 Aligned_cols=29 Identities=14% Similarity=0.269 Sum_probs=25.7
Q ss_pred cEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 374 PWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 374 ~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+||.||++||++|+.+.|.++++++.+.
T Consensus 3 ~~vv~f~~~~C~~C~~~~~~l~~~~~~~~ 31 (85)
T 1nho_A 3 VNIEVFTSPTCPYCPMAIEVVDEAKKEFG 31 (85)
T ss_dssp CCEEEESCSSSCCSTTHHHHHHHHHHHHC
T ss_pred EEEEEEECCCCcchHHHHHHHHHHHHHhc
Confidence 46899999999999999999999877664
No 159
>2b1k_A Thiol:disulfide interchange protein DSBE; C-terminal thioredoxin-like domain, N-terminal beta-sheet, fingerprint rigion, oxidoreductase; 1.90A {Escherichia coli} PDB: 3k8n_A 2g0f_A 1z5y_E 2b1l_A
Probab=97.75 E-value=2.1e-05 Score=68.40 Aligned_cols=30 Identities=20% Similarity=0.566 Sum_probs=27.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i 400 (414)
.++++||.||++||++|+.+.|.++++.+.
T Consensus 50 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~ 79 (168)
T 2b1k_A 50 QGKPVLLNVWATWCPTCRAEHQYLNQLSAQ 79 (168)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHC
Confidence 678999999999999999999999987653
No 160
>3dml_A Putative uncharacterized protein; thioredoxin, oxidoreductase, sulfur oxidation, thiol- disulfide oxidoreductase; HET: MSE; 1.90A {Paracoccus denitrificans} PDB: 3d4t_A*
Probab=97.73 E-value=6.9e-06 Score=69.11 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=22.1
Q ss_pred cCCCcEEEEEeCCCChhhHhHHHHHHHHH
Q 015013 370 HRQEPWLVVLYAPWCQFCQVIDVFMQIRF 398 (414)
Q Consensus 370 ~~~~~vlV~FyApWC~~Ck~m~p~~ee~~ 398 (414)
++...+||+|||+||++|++|++.+...+
T Consensus 16 ~~~~~~LV~F~A~wC~~Ck~~~~~i~~~~ 44 (116)
T 3dml_A 16 DKAELRLLMFEQPGCLYCARWDAEIAPQY 44 (116)
T ss_dssp ---CEEEEEEECTTCHHHHHHHHHTTTTG
T ss_pred ccCCCEEEEEECCCCHHHHHHHHHHHhhH
Confidence 35678999999999999999987655443
No 161
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=97.73 E-value=2.7e-05 Score=84.74 Aligned_cols=52 Identities=21% Similarity=0.455 Sum_probs=44.9
Q ss_pred CCCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 351 SQNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 351 ~~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
++.|..++.++|+.++...+.+..+||.||||||++|+.+.|.|+++++.+.
T Consensus 542 ~~~v~~l~~~~f~~~v~~~~~~~~~lv~F~ap~C~~c~~~~p~~~~lA~~~~ 593 (780)
T 3apo_A 542 NPSVVSLTPSTFNELVKQRKHDEVWMVDFYSPWSHPSQVLMPEWKRMARTLT 593 (780)
T ss_dssp SCSEEECCHHHHHHHTTTCCTTCCEEEEEECTTCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeecCcccHHHHhhccCCCCeEEEEEECCCCHHHHHhhHHHHHHHHHhh
Confidence 3679999999999988743346789999999999999999999999887764
No 162
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=97.72 E-value=2.2e-05 Score=67.41 Aligned_cols=32 Identities=19% Similarity=0.154 Sum_probs=29.0
Q ss_pred CCCcEEEEEeCCCChhhHh-HHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQV-IDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~-m~p~~ee~~~i~a 402 (414)
.++++||.|||+||++|+. +.|.++++.+.+.
T Consensus 29 ~gk~vlv~F~a~~C~~C~~e~~~~l~~l~~~~~ 61 (160)
T 3lor_A 29 RGKVVVVEVFQMLCPGCVNHGVPQAQKIHRMID 61 (160)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC
T ss_pred CCCEEEEEEEcCCCcchhhhhhHHHHHHHHHhC
Confidence 5789999999999999999 7999999888764
No 163
>3erw_A Sporulation thiol-disulfide oxidoreductase A; thioredoxin-like fold, RESA-like fold, dithiol, STOA, redox-active center; 2.50A {Bacillus subtilis} SCOP: c.47.1.0
Probab=97.72 E-value=2.2e-05 Score=65.78 Aligned_cols=32 Identities=13% Similarity=0.350 Sum_probs=28.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 33 ~gk~~ll~f~~~~C~~C~~~~~~l~~~~~~~~ 64 (145)
T 3erw_A 33 KGQKTILHFWTSWCPPCKKELPQFQSFYDAHP 64 (145)
T ss_dssp TTSEEEEEEECSSCHHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHcC
Confidence 67899999999999999999999999877664
No 164
>3ewl_A Uncharacterized conserved protein BF1870; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Bacteroides fragilis}
Probab=97.72 E-value=2.1e-05 Score=66.18 Aligned_cols=33 Identities=12% Similarity=0.385 Sum_probs=28.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHH---HHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQI---RFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee---~~~i~a~ 403 (414)
.++++||.|||+||++|+.+.|.+.+ +.+.+..
T Consensus 26 ~gk~vll~F~a~~C~~C~~~~~~l~~~~~l~~~~~~ 61 (142)
T 3ewl_A 26 KAQYTMLFFYDPDCSNCRKFEKLFAEIPAFVEMVEN 61 (142)
T ss_dssp CCSEEEEEECCSSCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHhHHHHHHhcc
Confidence 57899999999999999999999988 7776653
No 165
>2ju5_A Thioredoxin disulfide isomerase; protein, oxidoreductase; NMR {Chlamydophila pneumoniae}
Probab=97.72 E-value=2.2e-05 Score=68.20 Aligned_cols=32 Identities=13% Similarity=0.377 Sum_probs=26.8
Q ss_pred cCCCcEEEEEe-CCCChhhHhHHHHH---HHHHHHH
Q 015013 370 HRQEPWLVVLY-APWCQFCQVIDVFM---QIRFQII 401 (414)
Q Consensus 370 ~~~~~vlV~Fy-ApWC~~Ck~m~p~~---ee~~~i~ 401 (414)
..++++||.|| |+||++|+.+.|.+ +++.+.+
T Consensus 45 ~~gk~vlv~F~ga~wC~~C~~~~p~l~~~~~~~~~~ 80 (154)
T 2ju5_A 45 QDHKPIGLFFTGSDWCMWCIKMQDQILQSSEFKHFA 80 (154)
T ss_dssp HHCCCEEEEEECTTTCHHHHHHHHHTTTSHHHHHHH
T ss_pred hCCCeEEEEEeCCCCCHhHHHHHHHHhcCHHHHHHh
Confidence 35789999999 99999999999999 6654443
No 166
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=97.70 E-value=1.7e-05 Score=67.20 Aligned_cols=32 Identities=9% Similarity=0.028 Sum_probs=28.6
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|||+||++|+.+.|.+.++.+.+.
T Consensus 31 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~ 62 (143)
T 4fo5_A 31 LGRYTLLNFWAAYDAESRARNVQLANEVNKFG 62 (143)
T ss_dssp SCCEEEEEEECTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHhC
Confidence 56899999999999999999999999877653
No 167
>3hdc_A Thioredoxin family protein; ATCC53774, DSM 7210, , structural genomics, PSI-2, protein structure initiative; 1.77A {Geobacter metallireducens gs-15}
Probab=97.70 E-value=3.4e-05 Score=66.56 Aligned_cols=32 Identities=25% Similarity=0.479 Sum_probs=29.0
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 40 ~gk~vll~F~~~~C~~C~~~~~~l~~~~~~~~ 71 (158)
T 3hdc_A 40 RGKIVLVNFWASWCPYCRDEMPSMDRLVKSFP 71 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHcc
Confidence 56899999999999999999999999887764
No 168
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=97.69 E-value=2.4e-05 Score=67.09 Aligned_cols=32 Identities=13% Similarity=0.125 Sum_probs=28.7
Q ss_pred CCCcEEEEEeCCCChhhHhH-HHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVI-DVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m-~p~~ee~~~i~a 402 (414)
.++++||.|||+||++|+.+ .|.++++.+.+.
T Consensus 27 ~gk~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~ 59 (158)
T 3eyt_A 27 RGKVIVIEAFQMLCPGCVMHGIPLAQKVRAAFP 59 (158)
T ss_dssp TTSEEEEEEECTTCHHHHHTHHHHHHHHHHHSC
T ss_pred CCCEEEEEEECCcCcchhhhhhHHHHHHHHHhC
Confidence 57899999999999999995 999999888764
No 169
>3ha9_A Uncharacterized thioredoxin-like protein; PSI, MCSG, structural G midwest center for structural genomics, protein structure initiative; 1.70A {Aeropyrum pernix}
Probab=97.67 E-value=1.9e-05 Score=68.53 Aligned_cols=32 Identities=13% Similarity=0.323 Sum_probs=29.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.+.++.+.+.
T Consensus 36 ~gk~~lv~F~~~~C~~C~~~~~~l~~l~~~~~ 67 (165)
T 3ha9_A 36 GGDVVILWFMAAWCPSCVYMADLLDRLTEKYR 67 (165)
T ss_dssp CSSEEEEEEECTTCTTHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEEECCCCcchhhhHHHHHHHHHHcC
Confidence 67899999999999999999999999887764
No 170
>3fkf_A Thiol-disulfide oxidoreductase; structural genomics, PSI-2, structure initiative, midwest center for structural genomic oxidoreductase; 2.20A {Bacteroides fragilis}
Probab=97.66 E-value=1.7e-05 Score=66.86 Aligned_cols=31 Identities=16% Similarity=0.271 Sum_probs=28.6
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.||++||++|+.+.|.+.++.+.+
T Consensus 32 ~gk~vll~F~~~~C~~C~~~~~~l~~l~~~~ 62 (148)
T 3fkf_A 32 RNRYLLLNFWASWCDPQPEANAELKRLNKEY 62 (148)
T ss_dssp TTSEEEEEEECGGGCCCHHHHHHHHHHHHHT
T ss_pred CCcEEEEEEECCCCHHHHHHhHHHHHHHHHh
Confidence 5689999999999999999999999988776
No 171
>2f9s_A Thiol-disulfide oxidoreductase RESA; thioredoxin-like protein; HET: MSE; 1.40A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1st9_A 1su9_A 2h1d_A 2h1b_A 2h1a_A 2h19_A 2h1g_A 3c71_A 3c73_A
Probab=97.66 E-value=3.8e-05 Score=65.41 Aligned_cols=33 Identities=12% Similarity=0.442 Sum_probs=29.7
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.++++.+.+..
T Consensus 25 ~gk~vlv~F~~~~C~~C~~~~~~l~~~~~~~~~ 57 (151)
T 2f9s_A 25 KGKGVFLNFWGTWCEPCKKEFPYMANQYKHFKS 57 (151)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhcc
Confidence 568999999999999999999999998887753
No 172
>2lrn_A Thiol:disulfide interchange protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, oxidoreductase; NMR {Bacteroides SP}
Probab=97.65 E-value=3.6e-05 Score=65.87 Aligned_cols=33 Identities=12% Similarity=0.299 Sum_probs=29.6
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.++++.+.+..
T Consensus 28 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~~ 60 (152)
T 2lrn_A 28 KGKYVLVDFWFAGCSWCRKETPYLLKTYNAFKD 60 (152)
T ss_dssp TTSEEEEEEECTTCTTHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhcc
Confidence 568999999999999999999999998887753
No 173
>3ia1_A THIO-disulfide isomerase/thioredoxin; oxidoreductase, PSI-2, NYSGXRC, structu genomics, protein structure initiative; 1.76A {Thermus thermophilus}
Probab=97.64 E-value=3.7e-05 Score=65.58 Aligned_cols=29 Identities=21% Similarity=0.493 Sum_probs=27.6
Q ss_pred CcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 373 EPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 373 ~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+++||.||++||++|+.+.|.++++.+.+
T Consensus 31 k~vll~f~~~~C~~C~~~~~~l~~l~~~~ 59 (154)
T 3ia1_A 31 KPAVIVFWASWCTVCKAEFPGLHRVAEET 59 (154)
T ss_dssp SSEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEEcccChhHHHHHHHHHHHHHHc
Confidence 89999999999999999999999988877
No 174
>2qc7_A ERP31, ERP28, endoplasmic reticulum protein ERP29; B domain (residues 33-153), D domain (residues 154-261), CHA; 2.90A {Homo sapiens} PDB: 1g7e_A 1g7d_A
Probab=97.63 E-value=4.8e-05 Score=71.78 Aligned_cols=44 Identities=11% Similarity=0.075 Sum_probs=39.5
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeC--CCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYA--PWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyA--pWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|+.++.++|+.++. .+++|||+||| |||+ |.|.|+++++.+.
T Consensus 5 ~~v~~Lt~~nF~~~i~---~~~~vlV~FyA~~pWCg----l~P~~e~lA~~~~ 50 (240)
T 2qc7_A 5 KGALPLDTVTFYKVIP---KSKFVLVKFDTQYPYGE----KQDEFKRLAENSA 50 (240)
T ss_dssp TTCEECCTTHHHHHGG---GCSEEEEEECCSSCCSH----HHHHHHHHHHHHT
T ss_pred CCceECCHHHHHHHHc---CCCCEEEEEeCCCCCCc----chHHHHHHHHHhc
Confidence 5689999999999764 67899999999 9999 9999999999885
No 175
>2e7p_A Glutaredoxin; thioredoxin fold, poplar, electron transport; HET: GSH; 2.10A {Populus tremula x populus tremuloides} PDB: 1z7p_A 1z7r_A
Probab=97.63 E-value=4.1e-05 Score=62.57 Aligned_cols=26 Identities=15% Similarity=0.487 Sum_probs=22.2
Q ss_pred CCcEEEEEeCCCChhhHhHHHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQVIDVFMQIRF 398 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~m~p~~ee~~ 398 (414)
++++++ ||++||++|+.+.|.|+++.
T Consensus 19 ~~~vv~-f~a~~C~~C~~~~~~l~~~~ 44 (116)
T 2e7p_A 19 SAPVVV-FSKTYCGYCNRVKQLLTQVG 44 (116)
T ss_dssp SSSEEE-EECTTCHHHHHHHHHHHHHT
T ss_pred CCCEEE-EECCCChhHHHHHHHHHHcC
Confidence 456666 99999999999999999863
No 176
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=97.62 E-value=3.8e-05 Score=68.07 Aligned_cols=33 Identities=18% Similarity=0.053 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|||+||++|+...|.++++.+.+..
T Consensus 37 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~ 69 (180)
T 3kij_A 37 KGKVSLVVNVASDCQLTDRNYLGLKELHKEFGP 69 (180)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEecCCCCcHHHHHHHHHHHHHhcc
Confidence 568999999999999999999999999888753
No 177
>3hcz_A Possible thiol-disulfide isomerase; APC61559.2, cytophaga hutchinsoni structural genomics, PSI-2, protein structure initiative; 1.88A {Cytophaga hutchinsonii}
Probab=97.62 E-value=2.4e-05 Score=65.92 Aligned_cols=33 Identities=9% Similarity=0.107 Sum_probs=30.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.++++.+.+..
T Consensus 30 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~ 62 (148)
T 3hcz_A 30 QAKYTILFFWDSQCGHCQQETPKLYDWWLKNRA 62 (148)
T ss_dssp CCSEEEEEEECGGGCTTCSHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc
Confidence 578999999999999999999999998888754
No 178
>2f8a_A Glutathione peroxidase 1; thioredoxin fold, structural genomics, structural genomics consortium, SGC, oxidoreductase; 1.50A {Homo sapiens} SCOP: c.47.1.10 PDB: 1gp1_A 2he3_A
Probab=97.59 E-value=4.3e-05 Score=70.10 Aligned_cols=33 Identities=12% Similarity=-0.150 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+++|||+|||+||++|+...|.++++.+.+..
T Consensus 46 ~Gk~vlv~FwatwC~~C~~e~p~l~~l~~~~~~ 78 (208)
T 2f8a_A 46 RGKVLLIENVASLGGTTVRDYTQMNELQRRLGP 78 (208)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHccC
Confidence 568999999999999999999999999888754
No 179
>2lrt_A Uncharacterized protein; structural genomics, thioredoxin-like, NEW YORK structural G research consortium, nysgrc, PSI-biology; NMR {Bacteroides vulgatus}
Probab=97.59 E-value=4.3e-05 Score=65.86 Aligned_cols=33 Identities=6% Similarity=-0.018 Sum_probs=29.7
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.+.++.+.+..
T Consensus 34 ~gk~vll~F~a~wC~~C~~~~~~l~~l~~~~~~ 66 (152)
T 2lrt_A 34 KGKVVLIDFTVYNNAMSAAHNLALRELYNKYAS 66 (152)
T ss_dssp GGSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEEcCCChhhHHHHHHHHHHHHHhcc
Confidence 458999999999999999999999999888754
No 180
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=97.57 E-value=0.00012 Score=70.08 Aligned_cols=158 Identities=15% Similarity=0.125 Sum_probs=85.1
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhcC---------CCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cEEE
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLTG---------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RIEY 169 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~~---------~~i~VvflDTG~~fpET~~~v~~l~~~~gl-~i~~ 169 (414)
..|+..+.+.+ .+++|++|||-||+++ .|+.+.. .++..++++.|... ..+..+++++++|+ +.++
T Consensus 27 ~~L~d~v~~~g~~~vvvgLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~~~~~--d~~~A~~va~~lgi~~~~~ 104 (271)
T 1kqp_A 27 NFLKQYVKKTGAKGFVLGISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPHGTQQ--DEDDAQLALKFIKPDKSWK 104 (271)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSSSCT--THHHHHHHHHHHCCSEEEE
T ss_pred HHHHHHHHHcCCCCEEEECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCCCCCC--CHHHHHHHHHhcCCCeEEE
Confidence 45555555444 5799999999999875 6666543 35666777765433 47889999999998 7665
Q ss_pred EcCChHHHHHH---HHh-cCCCCCCcccchhhhcc---hhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCC
Q 015013 170 MFPDAVEVQAL---VRS-KGLFSFYEDGHQECCRV---RKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPV 240 (414)
Q Consensus 170 ~~P~~~~~~~~---~~~-~G~~~~~~~~~~~Cc~~---~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~ 240 (414)
+. -...+..+ +.. .|.+ ..+... |.+ .+...+..... ++.+.-|| ..+|.. ..... .
T Consensus 105 i~-i~~~~~~~~~~l~~~~~~~---~~~~~~-~N~~aR~r~~~l~~~A~~~g~lvl~tg-n~~E~~---~Gy~t-----~ 170 (271)
T 1kqp_A 105 FD-IKSTVSAFSDQYQQETGDQ---LTDFNK-GNVKARTRMIAQYAIGGQEGLLVLGTD-HAAEAV---TGFFT-----K 170 (271)
T ss_dssp CC-CHHHHHHHHHHHHHHHSCC---CCHHHH-HHHHHHHHHHHHHHHHHHHTCEEBCCC-CHHHHT---TTCSC-----T
T ss_pred ec-cHHHHHHHHHHHhhhcCCC---Ccchhh-hhHHHHHHHHHHHHHHHHCCCEEEECc-cHHHhc---cCCcc-----c
Confidence 52 22112222 111 1321 111111 222 12222222222 33333344 334431 11110 0
Q ss_pred CccccCCCCCeEEEEeCccccHHHHHHHHHhCCCCCChhhhC
Q 015013 241 FEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVPINSLHSQ 282 (414)
Q Consensus 241 ~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP~npLYd~ 282 (414)
++ + +..-++||.++++.||+...+..|+|. .++++
T Consensus 171 ~g--d----~~~~~~Pl~~l~K~eVr~la~~lglp~-~i~~k 205 (271)
T 1kqp_A 171 YG--D----GGADLLPLTGLTKRQGRTLLKELGAPE-RLYLK 205 (271)
T ss_dssp TT--T----TCCSBCTTTTCCHHHHHHHHHHTTCCT-HHHHS
T ss_pred cc--c----ccccccccccCCHHHHHHHHHHcCCCH-hhccC
Confidence 10 0 112379999999999999999999973 34443
No 181
>2v1m_A Glutathione peroxidase; selenium, selenocysteine, oxidoreductase, lipid peroxidase, schistosoma detoxification pathway; 1.00A {Schistosoma mansoni} PDB: 2wgr_A
Probab=97.57 E-value=5.1e-05 Score=65.69 Aligned_cols=33 Identities=18% Similarity=-0.025 Sum_probs=29.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+...|.++++.+.+..
T Consensus 30 ~gk~vlv~f~a~~C~~C~~~~~~l~~l~~~~~~ 62 (169)
T 2v1m_A 30 RGHVCLIVNVACKCGATDKNYRQLQEMHTRLVG 62 (169)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEeeccCCchHHHHHHHHHHHHHhhc
Confidence 568999999999999999999999998888754
No 182
>4evm_A Thioredoxin family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.51A {Streptococcus pneumoniae}
Probab=97.57 E-value=5e-05 Score=62.44 Aligned_cols=31 Identities=13% Similarity=0.264 Sum_probs=27.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.||++||++|+.+.|.++++.+.+
T Consensus 21 ~gk~~lv~f~~~~C~~C~~~~~~l~~~~~~~ 51 (138)
T 4evm_A 21 KGKKVYLKFWASWCSICLASLPDTDEIAKEA 51 (138)
T ss_dssp TTSEEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEEEcCcCHHHHHHHHHHHHHHHHh
Confidence 5689999999999999999999999877653
No 183
>2p5q_A Glutathione peroxidase 5; thioredoxin fold, oxidoreductase; 2.00A {Populus trichocarpa x populusdeltoides} PDB: 2p5r_A
Probab=97.56 E-value=5.4e-05 Score=65.55 Aligned_cols=33 Identities=15% Similarity=0.088 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.++++.+.+..
T Consensus 31 ~gk~vll~f~a~~C~~C~~~~~~l~~l~~~~~~ 63 (170)
T 2p5q_A 31 KGKVLLIVNVASKCGMTNSNYAEMNQLYEKYKD 63 (170)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEEeccCCccHHHHHHHHHHHHHhcc
Confidence 568999999999999999999999999888753
No 184
>2p31_A CL683, glutathione peroxidase 7; thioredoxin fold, NPGPX, phospholipid hydroperoxidase, struc genomics, structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=97.55 E-value=5.4e-05 Score=67.27 Aligned_cols=33 Identities=24% Similarity=0.089 Sum_probs=30.0
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|||+||++|+...|.|+++++.+..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~ 80 (181)
T 2p31_A 48 RGSVSLVVNVASECGFTDQHYRALQQLQRDLGP 80 (181)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEeccCCCCcHHHHHHHHHHHHHhhc
Confidence 568999999999999999999999999888754
No 185
>3dwv_A Glutathione peroxidase-like protein; alpha beta, 3-layer(ABA) sandwich, glutaredoxin fold, oxidor peroxidase; 1.41A {Trypanosoma brucei} PDB: 2rm5_A 2rm6_A 3e0u_A
Probab=97.54 E-value=4.2e-05 Score=68.43 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=30.4
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+++|||.|||+||++|+.+.|.++++.+.+..
T Consensus 45 ~Gk~vlv~F~atwC~~C~~~~p~l~~l~~~~~~ 77 (187)
T 3dwv_A 45 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKS 77 (187)
T ss_dssp TTSCEEEEEECCBCSCCTTHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEecCCCCCcHHHHHHHHHHHHHhhh
Confidence 568999999999999999999999999988854
No 186
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=97.52 E-value=7.2e-05 Score=63.51 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=30.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.++++.+.+..
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~l~~~~~~ 59 (152)
T 3gl3_A 27 TGSVVYLDFWASWCGPCRQSFPWMNQMQAKYKA 59 (152)
T ss_dssp TTSEEEEEEECTTCTHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHHhhc
Confidence 568999999999999999999999999888864
No 187
>2lus_A Thioredoxion; CR-Trp16, oxidoreductase; NMR {Carcinoscorpius rotundicauda}
Probab=96.66 E-value=1.3e-05 Score=67.36 Aligned_cols=31 Identities=13% Similarity=0.329 Sum_probs=27.8
Q ss_pred CCC-cEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQE-PWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~-~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++ ++||.|||+||++|+.+.|.++++++.+
T Consensus 24 ~gk~~vll~F~a~wC~~C~~~~~~l~~~~~~~ 55 (143)
T 2lus_A 24 KDKDIIGFYFSAHWCPPCRGFTPILADMYSEL 55 (143)
Confidence 456 9999999999999999999999987776
No 188
>2l5o_A Putative thioredoxin; structural genomics, unknown function, PSI-2, protein struct initiative; NMR {Neisseria meningitidis serogroup B}
Probab=97.52 E-value=6.6e-05 Score=63.83 Aligned_cols=33 Identities=12% Similarity=0.028 Sum_probs=29.6
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.++++.+.+..
T Consensus 27 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~~ 59 (153)
T 2l5o_A 27 QGKVTLINFWFPSCPGCVSEMPKIIKTANDYKN 59 (153)
T ss_dssp TTCEEEEEEECTTCTTHHHHHHHHHHHHHHGGG
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhcc
Confidence 568999999999999999999999998887753
No 189
>1kng_A Thiol:disulfide interchange protein CYCY; thioredoxin fold, cytochrome C maturation, atomic resolution oxidoreductase; 1.14A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.52 E-value=5e-05 Score=64.69 Aligned_cols=29 Identities=21% Similarity=0.384 Sum_probs=26.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
.++++||.||++||++|+.+.|.++++.+
T Consensus 41 ~gk~~ll~f~~~~C~~C~~~~~~l~~l~~ 69 (156)
T 1kng_A 41 KGKVSLVNVWASWCVPCHDEAPLLTELGK 69 (156)
T ss_dssp TTSCEEEEEECTTCHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEEcccCHhHHHHHHHHHHHHh
Confidence 47899999999999999999999998654
No 190
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=97.51 E-value=0.00012 Score=70.51 Aligned_cols=156 Identities=13% Similarity=0.166 Sum_probs=84.1
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhc-----------CCCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-cE
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-----------GRPFRVFSLDTGRLNPETYRFFDEVEKHFGI-RI 167 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~-----------~~~i~VvflDTG~~fpET~~~v~~l~~~~gl-~i 167 (414)
+.|+..+++.+ .+++|++|||.||+++ .|+.+. +.++..++++.|. .+..+..+++++.+|+ +.
T Consensus 29 ~~L~d~l~~~g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p~~~--~~~~~~A~~~a~~lgi~~~ 106 (279)
T 3q4g_A 29 AFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGE--QKDEDEAQLALSFIRPTHS 106 (279)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECCSSS--CSCHHHHHHHHHHHCCSEE
T ss_pred HHHHHHHHHcCCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEecCCC--hHHHHHHHHHHHHhCCCeE
Confidence 44555555555 6799999999999875 564442 3356677777653 3346889999999999 66
Q ss_pred EEEcCChHHHHHH-------HHhcCCCCCCcccchhh--hc---chhchhHHHHhccCcEEEecc-cccCCccCcCCCCc
Q 015013 168 EYMFPDAVEVQAL-------VRSKGLFSFYEDGHQEC--CR---VRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPV 234 (414)
Q Consensus 168 ~~~~P~~~~~~~~-------~~~~G~~~~~~~~~~~C--c~---~~Kv~Pl~ral~~~~~~itGi-RrdES~~~Ra~~~~ 234 (414)
+++ +-...+..+ ....+... .......| |. ..+..-|..+.......+.|. .++|..
T Consensus 107 ~~i-~i~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~NiqaR~R~~~Ly~~A~~~g~lVlgTgn~sE~~-------- 176 (279)
T 3q4g_A 107 VSV-NIKAGVDGLHAASHHALANTGLIP-SDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENI-------- 176 (279)
T ss_dssp EEC-CCHHHHHHHHHHHHHHHHHHTCSC-SSCCCHHHHHHHHHHHHHHHHHHHHHHHHTEEEBCCCCHHHHH--------
T ss_pred EEE-ECHHHHHHHHHHHHHHhhhhcccc-cCCCcccchhhhHHHHHHHHHHHHHHHHCCCEEecCccHHhhh--------
Confidence 654 222223222 11222110 01111122 22 222222322222233445453 333321
Q ss_pred eecCCCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCC
Q 015013 235 VQVDPVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 235 ~e~d~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP 275 (414)
..+-..| +. +-.-++||.+.++.||+...+..|+|
T Consensus 177 ~Gy~Tky----GD--~~~di~Pl~dl~Kt~Vr~LA~~lgiP 211 (279)
T 3q4g_A 177 TGFYTKF----GD--GACDLAPLFGLNKRQVRLLAKTLGAP 211 (279)
T ss_dssp HTCSCTT----TT--TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred ccchhhc----CC--cccceeecCCCcHHHHHHHHHHhCCc
Confidence 1111111 10 11238999999999999999998875
No 191
>3kcm_A Thioredoxin family protein; SGX, thioredoxin protein, PSI, structural genomics, protein initiative; 2.45A {Geobacter metallireducens gs-15}
Probab=97.49 E-value=7.8e-05 Score=63.44 Aligned_cols=32 Identities=22% Similarity=0.343 Sum_probs=29.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 27 ~gk~vll~f~~~~C~~C~~~~~~l~~~~~~~~ 58 (154)
T 3kcm_A 27 KGQVVIVNFWATWCPPCREEIPSMMRLNAAMA 58 (154)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999887774
No 192
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=97.45 E-value=0.00023 Score=68.86 Aligned_cols=158 Identities=11% Similarity=0.069 Sum_probs=80.5
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHhc-------CCCeEEEEEeCCCCcHHHHHHHHHHHHHhC-CcEEEEc
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHLT-------GRPFRVFSLDTGRLNPETYRFFDEVEKHFG-IRIEYMF 171 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~~-------~~~i~VvflDTG~~fpET~~~v~~l~~~~g-l~i~~~~ 171 (414)
..|+..+++.+ ++++|++|||.||+++ .|+.+. +.+..++.+-.-+..++..+-+.++++.+| ++.+++
T Consensus 35 ~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG~~~~~~~viav~~p~~~~~~~~dA~~~a~~lg~i~~~~i- 113 (285)
T 3dpi_A 35 GFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYGAQHDEADARRALAFVRADETLTV- 113 (285)
T ss_dssp HHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSCC---CHHHHHHHHHHCCSEEEEC-
T ss_pred HHHHHHHHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhcccCcccEEEEEEcCCCCHHHHHHHHHHHHHcCCCcEEEE-
Confidence 45555555555 5799999999999885 555442 222234433333334556677889999998 676665
Q ss_pred CChHH---HHHHHHhcCCCCCCc---ccchhhh--cchhchhHHHHhccCcEEEecc-cccCCccCcCCCCceecCCCCc
Q 015013 172 PDAVE---VQALVRSKGLFSFYE---DGHQECC--RVRKVRPLRRALKGLRAWITGQ-RKDQSPGTRSEIPVVQVDPVFE 242 (414)
Q Consensus 172 P~~~~---~~~~~~~~G~~~~~~---~~~~~Cc--~~~Kv~Pl~ral~~~~~~itGi-RrdES~~~Ra~~~~~e~d~~~~ 242 (414)
+-... +...+...|.. +.. .+...|. ...+..-|..+.......+.|. .++|.. +.+-..++
T Consensus 114 ~i~~~~~~~~~~l~~~g~~-~~~~~~~~~~~~NiqaR~Rm~~L~~~A~~~g~lVlgTgn~sE~~--------~Gy~T~~G 184 (285)
T 3dpi_A 114 DVKPAADAMLAALAAGGLA-YLDHAQQDFVLGNIKARERMIAQYAVAGARNGVVIGTDHAAESV--------MGFFTKFG 184 (285)
T ss_dssp CCHHHHHHHHHHHHHTTCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEBCCCCHHHHH--------HHHHHCCC
T ss_pred EChHHHHHHHHHHHhcCcc-ccccCCCchhhhhHHHHHHHHHHHHHHHHCCCEEEeCccHHhhh--------CCcccccC
Confidence 22222 22223333431 111 0111221 2222333333333344445443 222211 11100110
Q ss_pred cccCCCCCeEEEEeCccccHHHHHHHHHhCCCC
Q 015013 243 GLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 243 ~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP 275 (414)
+ +..-++||.++++.||+...+..|+|
T Consensus 185 --D----~~~~~~Pl~~l~K~eV~~la~~lg~p 211 (285)
T 3dpi_A 185 --D----GGADVLPLAGLTKRRVRALARMLGAD 211 (285)
T ss_dssp --C----CCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred --C----CceeEeeecCCcHHHHHHHHHHcCCC
Confidence 0 11237999999999999999998875
No 193
>3kh7_A Thiol:disulfide interchange protein DSBE; TRX-like, thiol-disulfide exchange, cell inner membrane, CYT C-type biogenesis, disulfide bond; 1.75A {Pseudomonas aeruginosa} PDB: 3kh9_A
Probab=97.44 E-value=0.00011 Score=64.90 Aligned_cols=30 Identities=23% Similarity=0.505 Sum_probs=27.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i 400 (414)
.++++||.||++||++|+.+.|.++++.+.
T Consensus 57 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~ 86 (176)
T 3kh7_A 57 KGKPALVNVWGTWCPSCRVEHPELTRLAEQ 86 (176)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEECCcCHHHHHHHHHHHHHHHC
Confidence 578999999999999999999999987664
No 194
>2lja_A Putative thiol-disulfide oxidoreductase; structural genomics, unknown function, thioredoxin-like; NMR {Bacteroides vulgatus}
Probab=97.44 E-value=6.7e-05 Score=63.70 Aligned_cols=32 Identities=16% Similarity=0.243 Sum_probs=28.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 29 ~gk~~lv~f~~~~C~~C~~~~~~l~~l~~~~~ 60 (152)
T 2lja_A 29 KGKYIYIDVWATWCGPCRGELPALKELEEKYA 60 (152)
T ss_dssp TTSEEEEEECCSSCCGGGGTHHHHHHHHHHST
T ss_pred CCCEEEEEEECCcCHhHHHHhHHHHHHHHHhc
Confidence 56899999999999999999999999877664
No 195
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=97.43 E-value=0.00059 Score=65.57 Aligned_cols=152 Identities=13% Similarity=0.130 Sum_probs=82.4
Q ss_pred HHHHHHHHHcC--CcEEEEechHHHHHHH-HHHHhcC-----------CCeEEEEEeCCCCcHHHHHHHHHHHHHhCC-c
Q 015013 102 EIMDRALEKFG--NDIAIAFSGAEDVALI-EYAHLTG-----------RPFRVFSLDTGRLNPETYRFFDEVEKHFGI-R 166 (414)
Q Consensus 102 eil~~a~~~~~--~~i~vafSGGKDSvlL-~L~~~~~-----------~~i~VvflDTG~~fpET~~~v~~l~~~~gl-~ 166 (414)
..|+..+.+.+ .+++|++|||-||+++ .|+.+.. .++..++++.|.. +..+..+++++++|+ +
T Consensus 28 ~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~~~--~~~~dA~~va~~lgi~~ 105 (275)
T 1wxi_A 28 DFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYGVQ--ADEQDCQDAIAFIQPDR 105 (275)
T ss_dssp HHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSSSC--TTHHHHHHHHHHHCCSE
T ss_pred HHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCCCc--cCHHHHHHHHHHcCCCe
Confidence 45555555544 4699999999999875 5665531 2567778876643 357889999999998 6
Q ss_pred EEEEcCChHHHHHH---HHhcCCCCCCcccchhhhcc---hhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecC
Q 015013 167 IEYMFPDAVEVQAL---VRSKGLFSFYEDGHQECCRV---RKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVD 238 (414)
Q Consensus 167 i~~~~P~~~~~~~~---~~~~G~~~~~~~~~~~Cc~~---~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d 238 (414)
.+++. -...+..+ ....|.. ..+... |.+ .+...+..... ++.++-||.. +|.. .....
T Consensus 106 ~~~i~-i~~~~~~~~~~l~~~g~~---~~~~~~-~N~~aR~r~~~l~~~A~~~g~lvlgTgn~-~E~~---~Gy~t---- 172 (275)
T 1wxi_A 106 VLTVN-IKGAVLASEQALREAGIE---LSDFVR-GNEKARERMKAQYSIAGMTSGVVVGTDHA-AEAI---TGFFT---- 172 (275)
T ss_dssp EEECC-CHHHHHHHHHHHHHHTCC---CCHHHH-HHHHHHHHHHHHHHHHHHTTEEEBCCCCH-HHHT---TTCSC----
T ss_pred EEEEe-cHHHHHHHHHHHHhcCCC---CCCchh-hhhhhhHHHHHHHHHHHHCCCEEEECccH-HHHc---cCccc----
Confidence 66542 22222222 2222331 111111 222 11222222222 2233334433 3321 11100
Q ss_pred CCCccccCCCCCeEEEEeCccccHHHHHHHHHhCCCC
Q 015013 239 PVFEGLEGGVGSLVKWNPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 239 ~~~~~~~~~~~~~~ki~PL~dWt~~DVw~Yi~~~~lP 275 (414)
.+ +. +..-++||.++++.||+...+..|+|
T Consensus 173 -~~----gd--~~~~~~PL~~l~K~eVr~la~~lglp 202 (275)
T 1wxi_A 173 -KY----GD--GGTDINPLYRLNKRQGKQLLAALACP 202 (275)
T ss_dssp -TT----TT--TCCSBCTTTTCCHHHHHHHHHHTTCC
T ss_pred -cc----CC--CccceeeccCCCHHHHHHHHHHhCCc
Confidence 01 00 11237999999999999999999987
No 196
>2obi_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase (GPX4); human GPX4, selenoprotein, thioredoxin-fold, anti-oxidatve defense system; 1.55A {Homo sapiens}
Probab=97.42 E-value=0.0001 Score=65.41 Aligned_cols=33 Identities=18% Similarity=-0.055 Sum_probs=30.0
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++|+.+.|.|+++.+.+..
T Consensus 46 ~gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~ 78 (183)
T 2obi_A 46 RGFVCIVTNVASQCGKTEVNYTQLVDLHARYAE 78 (183)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEeCCCCCCcHHHHHHHHHHHHHHhc
Confidence 568999999999999999999999999888754
No 197
>1jfu_A Thiol:disulfide interchange protein TLPA; thioredoxin-like, double disulfide bridge, membrane protein; 1.60A {Bradyrhizobium japonicum} SCOP: c.47.1.10
Probab=97.42 E-value=0.00012 Score=64.80 Aligned_cols=32 Identities=25% Similarity=0.407 Sum_probs=29.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 59 ~gk~vll~F~a~~C~~C~~~~~~l~~l~~~~~ 90 (186)
T 1jfu_A 59 RGKTLLVNLWATWCVPCRKEMPALDELQGKLS 90 (186)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEEEEeCCCHhHHHHHHHHHHHHHHhc
Confidence 56899999999999999999999999887764
No 198
>2vup_A Glutathione peroxidase-like protein; oxidoreductase, trypanothione, dithiol-dependant peroxidase; 2.10A {Trypanosoma brucei}
Probab=97.42 E-value=0.00011 Score=65.84 Aligned_cols=33 Identities=12% Similarity=0.092 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|||+||++|+.+.|.|+++.+.+..
T Consensus 47 ~Gk~vll~F~atwC~~C~~~~~~l~~l~~~~~~ 79 (190)
T 2vup_A 47 KGSPLLIYNVASKCGYTKGGYETATTLYNKYKS 79 (190)
T ss_dssp TTSCEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEecCCCCccHHHHHHHHHHHHHHhc
Confidence 568999999999999999999999999888754
No 199
>1un2_A DSBA, thiol-disulfide interchange protein; disulfide oxidoreductase, oxidoreductase, protein disulfide isomerase, protein folding, thioredoxin; 2.4A {Escherichia coli} SCOP: c.47.1.13
Probab=97.41 E-value=2e-05 Score=71.98 Aligned_cols=31 Identities=10% Similarity=0.357 Sum_probs=26.6
Q ss_pred CCcEEEEEeCCCChhhHhHHHHH---HHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQVIDVFM---QIRFQIIA 402 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~m~p~~---ee~~~i~a 402 (414)
.+++||+||++|||||+.|.|.+ +++.+.+.
T Consensus 113 ~~~~vveFf~~~C~~C~~~~p~~~~~~~l~~~~~ 146 (197)
T 1un2_A 113 GAPQVLEFFSFFCPHCYQFEEVLHISDNVKKKLP 146 (197)
T ss_dssp TCCSEEEEECTTCHHHHHHHHTSCHHHHHTTSSC
T ss_pred CCCEEEEEECCCChhHHHhCcccccHHHHHHHCC
Confidence 46899999999999999999998 87665553
No 200
>3cmi_A Peroxiredoxin HYR1; thioredoxin-like fold, oxidoreductase, peroxidase, redox-ACT center; 2.02A {Saccharomyces cerevisiae}
Probab=97.40 E-value=8.2e-05 Score=65.16 Aligned_cols=32 Identities=16% Similarity=0.120 Sum_probs=28.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|||+||++|+ ..|.++++.+.+..
T Consensus 31 ~Gk~vll~F~a~wC~~C~-~~~~l~~l~~~~~~ 62 (171)
T 3cmi_A 31 KGKVVLIVNVASKCGFTP-QYKELEALYKRYKD 62 (171)
T ss_dssp TTCEEEEEEEESSSCCHH-HHHHHHHHHHHHGG
T ss_pred CCCEEEEEEEecCCCcch-hHHHHHHHHHHhcc
Confidence 568999999999999999 99999999888754
No 201
>2ls5_A Uncharacterized protein; structural genomics, unknown function, thioredoxin-like, NEW structural genomics research consortium; NMR {Bacteroides thetaiotaomicron}
Probab=96.52 E-value=2.3e-05 Score=67.50 Aligned_cols=32 Identities=19% Similarity=0.408 Sum_probs=27.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHH-HHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQI-RFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee-~~~i~a 402 (414)
.++++||.||++||++|+.+.|.+++ +.+.+.
T Consensus 32 ~gk~vll~f~a~~C~~C~~~~~~l~~~l~~~~~ 64 (159)
T 2ls5_A 32 RGKVVMLQFTASWCGVCRKEMPFIEKDIWLKHK 64 (159)
Confidence 56899999999999999999999998 666554
No 202
>2gs3_A PHGPX, GPX-4, phospholipid hydroperoxide glutathione peroxidase; GSHPX-4,phospholipid hydroperoxide; 1.90A {Homo sapiens}
Probab=97.39 E-value=0.00012 Score=65.31 Aligned_cols=33 Identities=15% Similarity=-0.191 Sum_probs=29.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|||+||++|+...|.++++.+.+..
T Consensus 48 ~Gk~vlv~F~atwC~~C~~~~~~l~~l~~~~~~ 80 (185)
T 2gs3_A 48 RGFVCIVTNVASQGGKTEVNYTQLVDLHARYAE 80 (185)
T ss_dssp TTSEEEEEEECSSSTTHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEecCCCCchHHHHHHHHHHHHHhhc
Confidence 568999999999999999999999999888754
No 203
>2dlx_A UBX domain-containing protein 7; UAS domain, protein KIAA0794, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: c.47.1.24
Probab=97.38 E-value=0.00017 Score=63.29 Aligned_cols=51 Identities=12% Similarity=0.118 Sum_probs=33.3
Q ss_pred chhhhccCCCCeEecCccchHHHHh-hhcCCCcEEEEEeCCCChhhHhHHHHH
Q 015013 343 EAVADIFNSQNLVTLNRTGMENLAR-LDHRQEPWLVVLYAPWCQFCQVIDVFM 394 (414)
Q Consensus 343 ~~~~dl~~~~~v~~l~~~~~e~~v~-~~~~~~~vlV~FyApWC~~Ck~m~p~~ 394 (414)
....++|.....+.. ..++++.+. ....++++||+||++||..|+.|+...
T Consensus 13 ~~l~~lf~~p~~~~~-~~~~~~Al~~Ak~~~K~vlvd~~a~wC~~C~~me~~v 64 (153)
T 2dlx_A 13 TTLADLFRPPIDLMH-KGSFETAKECGQMQNKWLMINIQNVQDFACQCLNRDV 64 (153)
T ss_dssp CCCCCTTSCCTTTSC-CSCHHHHHHHHHHHTCEEEEEEECSCTTTHHHHHHHT
T ss_pred hHHHHhhCCchhhhc-ccCHHHHHHHHHHcCCeEEEEEECCCCHhHHHHHHHh
Confidence 344555554433222 345555443 345689999999999999999997543
No 204
>2cvb_A Probable thiol-disulfide isomerase/thioredoxin; redox protein, structural genomics, riken struc genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.47.1.10 PDB: 2ywo_A
Probab=97.35 E-value=0.00012 Score=64.92 Aligned_cols=32 Identities=9% Similarity=0.011 Sum_probs=29.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++|+.+.|.++++.+.+.
T Consensus 32 ~gk~vlv~F~a~~C~~C~~~~~~l~~l~~~~~ 63 (188)
T 2cvb_A 32 HEPLLAVVFMCNHCPYVKGSIGELVALAERYR 63 (188)
T ss_dssp CSSEEEEEEECSSCHHHHTTHHHHHHHHHHTT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHHhh
Confidence 56899999999999999999999999888765
No 205
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=97.35 E-value=0.00013 Score=62.06 Aligned_cols=31 Identities=13% Similarity=0.289 Sum_probs=28.7
Q ss_pred CCCcEEEEEeCCCChh--hHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQF--CQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~--Ck~m~p~~ee~~~i~ 401 (414)
.++++||.||++||++ |+.+.|.+.++.+.+
T Consensus 32 ~gk~vll~F~a~~C~~v~C~~~~~~l~~l~~~~ 64 (150)
T 3fw2_A 32 KQKSLLINFWASWNDSISQKQSNSELREIYKKY 64 (150)
T ss_dssp TTSEEEEEEECTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHHHHh
Confidence 5689999999999999 999999999988876
No 206
>3kp9_A Vkorc1/thioredoxin domain protein; warfarin, disulfide formation, blood coagulation, oxidoreduc blood coagulation,oxidoreductase; HET: U10; 3.60A {Synechococcus SP}
Probab=97.34 E-value=3.8e-05 Score=74.52 Aligned_cols=27 Identities=22% Similarity=0.399 Sum_probs=23.8
Q ss_pred EEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.+|+|||||||||++++|.|+++++.+
T Consensus 200 ~vV~F~A~WC~~Ck~l~p~le~lA~~l 226 (291)
T 3kp9_A 200 GGTMYGAYWCPHCQDQKELFGAAFDQV 226 (291)
T ss_dssp TCEEEECTTCHHHHHHHHHHGGGGGGS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHc
Confidence 479999999999999999999976544
No 207
>1ttz_A Conserved hypothetical protein; structural genomics, unknown function, PSI, protein structure initiative; 2.11A {Xanthomonas campestris} SCOP: c.47.1.1 PDB: 1xpv_A
Probab=97.31 E-value=9.9e-05 Score=58.56 Aligned_cols=23 Identities=13% Similarity=0.179 Sum_probs=21.1
Q ss_pred EEEEeCCCChhhHhHHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIRF 398 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~~ 398 (414)
|+.||+|||++|+.++|.+++++
T Consensus 3 vv~f~a~~C~~C~~~~~~L~~~~ 25 (87)
T 1ttz_A 3 LTLYQRDDCHLCDQAVEALAQAR 25 (87)
T ss_dssp EEEEECSSCHHHHHHHHHHHHTT
T ss_pred EEEEECCCCchHHHHHHHHHHHH
Confidence 78899999999999999999854
No 208
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=97.27 E-value=0.0002 Score=62.13 Aligned_cols=33 Identities=12% Similarity=-0.005 Sum_probs=29.9
Q ss_pred CCCcEEEEEeCCCChh-hHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQF-CQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~-Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++ |+.+.|.++++.+.+..
T Consensus 25 ~gk~vll~F~~~~C~~~C~~~~~~l~~l~~~~~~ 58 (171)
T 2rli_A 25 RGQWVLMYFGFTHCPDICPDELEKLVQVVRQLEA 58 (171)
T ss_dssp TTSEEEEEEECTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEcCCCCchhHHHHHHHHHHHHHHhh
Confidence 4689999999999998 99999999999888854
No 209
>1a8l_A Protein disulfide oxidoreductase; PDI, thioredoxin fold; 1.90A {Pyrococcus furiosus} SCOP: c.47.1.2 c.47.1.2 PDB: 1j08_A
Probab=97.25 E-value=0.00016 Score=65.99 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=25.8
Q ss_pred CCCcEEEEEeCC-CChhhHhHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAP-WCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 371 ~~~~vlV~FyAp-WC~~Ck~m~p~~ee~~~i 400 (414)
.+..+||.||++ ||++|+.+.|.|+++++.
T Consensus 21 ~~~v~lv~f~~~~~C~~C~~~~~~~~~la~~ 51 (226)
T 1a8l_A 21 VNPVKLIVFVRKDHCQYCDQLKQLVQELSEL 51 (226)
T ss_dssp CSCEEEEEEECSSSCTTHHHHHHHHHHHHTT
T ss_pred CCCeEEEEEecCCCCchhHHHHHHHHHHHhh
Confidence 455678999999 999999999999997754
No 210
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=97.23 E-value=0.00023 Score=61.12 Aligned_cols=33 Identities=15% Similarity=-0.033 Sum_probs=30.0
Q ss_pred CCCcEEEEEeCCCChh-hHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQF-CQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~-Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||++||++ |+.+.|.++++.+.+..
T Consensus 22 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~ 55 (164)
T 2ggt_A 22 LGQWLLIYFGFTHCPDVCPEELEKMIQVVDEIDS 55 (164)
T ss_dssp TTCEEEEEEECTTCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchhHHHHHHHHHHHHHHhh
Confidence 4689999999999998 99999999999888864
No 211
>2ywi_A Hypothetical conserved protein; uncharacterized conserved protein, NPPSFA, national project protein structural and functional analyses; 1.60A {Geobacillus kaustophilus}
Probab=97.23 E-value=0.00024 Score=63.22 Aligned_cols=33 Identities=6% Similarity=0.128 Sum_probs=28.9
Q ss_pred CCC-cEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQE-PWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~-~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++ ++||.||++||++|+.+.|.++++.+.+..
T Consensus 44 ~gk~~vlv~F~a~~C~~C~~~~~~l~~l~~~~~~ 77 (196)
T 2ywi_A 44 KSDAATVIMFICNHCPFVKHVQHELVRLANDYMP 77 (196)
T ss_dssp CCSSEEEEEECCSSCHHHHHHHHHHHHHHHHHGG
T ss_pred CCCCeEEEEEeCCCCccHHHHHHHHHHHHHHHHh
Confidence 345 599999999999999999999999888753
No 212
>2hyx_A Protein DIPZ; thioredoxin fold, jelly-roll, structural genomics, TB struct genomics consortium, TBSGC, unknown function; 1.90A {Mycobacterium tuberculosis}
Probab=97.22 E-value=0.00023 Score=70.82 Aligned_cols=33 Identities=21% Similarity=0.152 Sum_probs=30.0
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+++|||+||++||++|+.+.|.|+++.+.+..
T Consensus 81 ~GK~vLl~F~atwC~~C~~~~p~L~~l~~~~~~ 113 (352)
T 2hyx_A 81 RGKVVLIDFWAYSCINCQRAIPHVVGWYQAYKD 113 (352)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHHHGG
T ss_pred CCCEEEEEEECCCChhHHHHHHHHHHHHHHhhc
Confidence 578999999999999999999999999888753
No 213
>2fgx_A Putative thioredoxin; NET3, NESG, GFT-glutaredoxin-like, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=97.17 E-value=0.00027 Score=58.38 Aligned_cols=29 Identities=17% Similarity=0.220 Sum_probs=25.3
Q ss_pred CcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 373 EPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 373 ~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++|+.||++||++|+.++|.++++++-+
T Consensus 29 m~~vv~y~~~~C~~C~~a~~~L~~l~~e~ 57 (107)
T 2fgx_A 29 PRKLVVYGREGCHLCEEMIASLRVLQKKS 57 (107)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHHHHHS
T ss_pred ccEEEEEeCCCChhHHHHHHHHHHHHHhc
Confidence 36799999999999999999999976554
No 214
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=97.16 E-value=0.00074 Score=65.88 Aligned_cols=119 Identities=11% Similarity=0.005 Sum_probs=77.2
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh-------CCcEEEEcCChHHHHHHHHhc
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-------GIRIEYMFPDAVEVQALVRSK 184 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~-------gl~i~~~~P~~~~~~~~~~~~ 184 (414)
+++++++|| .||.++ +|+.+.+.++..+|+++|. ...+.+.++++++ +++++++.+ .. +..
T Consensus 180 ~kvlvllSG-vDS~vaa~ll~~~G~~v~~v~~~~~~---~~~~~a~~~a~~l~~~~~~~~i~~~vv~~-~~---~~~--- 248 (307)
T 1vbk_A 180 GRMIGILHD-ELSALAIFLMMKRGVEVIPVYIGKDD---KNLEKVRSLWNLLKRYSYGSKGFLVVAES-FD---RVL--- 248 (307)
T ss_dssp CEEEEECSS-HHHHHHHHHHHHBTCEEEEEEESCSS---HHHHHHHHHHHHHHTTCTTSCCCCEEESS-HH---HHH---
T ss_pred CcEEEEEeC-CcHHHHHHHHHhCCCeEEEEEEEECH---HHHHHHHHHHHHHhhhccCCCCcEEEeCC-CH---HHH---
Confidence 378999999 999775 8889999999999999653 4467778888877 666666521 11 110
Q ss_pred CCCCCCcccchhhhcchhchhHHHHh-ccCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEEEeCccccHH
Q 015013 185 GLFSFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGN 263 (414)
Q Consensus 185 G~~~~~~~~~~~Cc~~~Kv~Pl~ral-~~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~ 263 (414)
.-+. .+.+.++||...+|-..+...+.. .+.. ....-+.||.++++.
T Consensus 249 ----------------------~~A~~~ga~~I~tG~~~~~~~~qt~~l~~--~~~~--------~~~~vl~PL~~~~K~ 296 (307)
T 1vbk_A 249 ----------------------KLIRDFGVKGVIKGLRPNDLNSEVSEITE--DFKM--------FPVPVYYPLIALPEE 296 (307)
T ss_dssp ----------------------HHHHHHTCCEEECCCCGGGCCTTCHHHHH--HHHH--------CSSCEECHHHHSCHH
T ss_pred ----------------------HHHHHcCCCEEEECcccchhccccHHHhh--hccC--------cCCeEEEccCCCCHH
Confidence 1111 267889999876542101111111 1110 012347999999999
Q ss_pred HHHHHHHhCCC
Q 015013 264 DIWNFLRTMDV 274 (414)
Q Consensus 264 DVw~Yi~~~~l 274 (414)
||.++.++.|+
T Consensus 297 eI~~~a~~iGl 307 (307)
T 1vbk_A 297 YIKSVKERLGL 307 (307)
T ss_dssp HHHHHHHHHTC
T ss_pred HHHHHHHHcCC
Confidence 99999988775
No 215
>2k6v_A Putative cytochrome C oxidase assembly protein; thioredoxin fold, electron transfer protein, metal binding protein, electron transport; NMR {Thermus thermophilus}
Probab=97.15 E-value=0.00017 Score=62.45 Aligned_cols=32 Identities=9% Similarity=0.225 Sum_probs=28.5
Q ss_pred CCCcEEEEEeCCCChh-hHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQF-CQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~-Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||++ |+.+.|.++++.+.+.
T Consensus 34 ~gk~vll~f~~~~C~~~C~~~~~~l~~~~~~~~ 66 (172)
T 2k6v_A 34 QDKVVLLFFGFTRCPDVCPTTLLALKRAYEKLP 66 (172)
T ss_dssp TTSEEEEEEECTTCSSHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHhh
Confidence 5689999999999997 9999999999877664
No 216
>2jsy_A Probable thiol peroxidase; solution structure, antioxidant, oxidoreductase; NMR {Bacillus subtilis} PDB: 2jsz_A
Probab=97.13 E-value=0.0003 Score=61.11 Aligned_cols=31 Identities=3% Similarity=0.053 Sum_probs=28.3
Q ss_pred CCCcEEEEEeCCC-ChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPW-CQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApW-C~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.||++| |++|+...|.++++.+.+
T Consensus 43 ~gk~~vl~F~~~~~C~~C~~~~~~l~~l~~~~ 74 (167)
T 2jsy_A 43 KGKVTIISVIPSIDTGVCDAQTRRFNEEAAKL 74 (167)
T ss_dssp TTSCEEEEECSCSTTSHHHHTHHHHHHHHHHH
T ss_pred CCCeEEEEEecCCCCCchHHHHHHHHHHHHHc
Confidence 4679999999999 999999999999988776
No 217
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=97.12 E-value=0.00044 Score=65.11 Aligned_cols=124 Identities=17% Similarity=0.240 Sum_probs=75.0
Q ss_pred cEEEEechHHHHHH-HHHHHhcCCCeEEEEEeCCCC-----cH-HHHHHHHHHHHHhCCcEEEEcCChHHHHHHHHhcCC
Q 015013 114 DIAIAFSGAEDVAL-IEYAHLTGRPFRVFSLDTGRL-----NP-ETYRFFDEVEKHFGIRIEYMFPDAVEVQALVRSKGL 186 (414)
Q Consensus 114 ~i~vafSGGKDSvl-L~L~~~~~~~i~VvflDTG~~-----fp-ET~~~v~~l~~~~gl~i~~~~P~~~~~~~~~~~~G~ 186 (414)
++++++||||||++ ++++.+.+.++..++.+.+.. |. .-.+.++.+++.+|+++.++.-...
T Consensus 6 Kvvvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~----------- 74 (237)
T 3rjz_A 6 DVAVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGE----------- 74 (237)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------------
T ss_pred EEEEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCC-----------
Confidence 68999999999987 588888887776554444322 10 1136788899999999887631110
Q ss_pred CCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCccCcCCCCceecCCCCccccCCCCCeEEEEeCccccHHH
Q 015013 187 FSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSPGTRSEIPVVQVDPVFEGLEGGVGSLVKWNPVANVKGND 264 (414)
Q Consensus 187 ~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~~~Ra~~~~~e~d~~~~~~~~~~~~~~ki~PL~dWt~~D 264 (414)
.-..++.|.++++ +.+++++|--..+- +|.....+-.. -|+.-+.||.....++
T Consensus 75 ------------~~~e~e~l~~~l~~~~i~~vv~Gdi~s~y--qr~r~e~vc~~----------~gl~~~~PLW~~d~~~ 130 (237)
T 3rjz_A 75 ------------KEKEVEDLKRVLSGLKIQGIVAGALASKY--QRKRIEKVAKE----------LGLEVYTPAWGRDAKE 130 (237)
T ss_dssp ---------------CHHHHHHHHTTSCCSEEECC---CCS--HHHHHHHHHHH----------TTCEEECSSSSCCHHH
T ss_pred ------------chHHHHHHHHHHHhcCCcEEEECCcchHH--HHHHHHHHHHH----------cCCEEEccccCCCHHH
Confidence 0112466667776 45688888766554 34433221100 1466789999998888
Q ss_pred HHHHHHhC
Q 015013 265 IWNFLRTM 272 (414)
Q Consensus 265 Vw~Yi~~~ 272 (414)
+..-+...
T Consensus 131 Ll~e~i~~ 138 (237)
T 3rjz_A 131 YMRELLNL 138 (237)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHC
Confidence 76655443
No 218
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=97.08 E-value=0.00038 Score=62.92 Aligned_cols=34 Identities=6% Similarity=-0.040 Sum_probs=30.6
Q ss_pred CCCcEEEEEeCCCChh-hHhHHHHHHHHHHHHHHh
Q 015013 371 RQEPWLVVLYAPWCQF-CQVIDVFMQIRFQIIALV 404 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~-Ck~m~p~~ee~~~i~a~~ 404 (414)
.++++||.||++||++ |+...|.|.++.+.++..
T Consensus 40 ~Gk~vlv~F~at~C~~vC~~~~~~l~~l~~~~~~~ 74 (200)
T 2b7k_A 40 LGKFSIIYFGFSNCPDICPDELDKLGLWLNTLSSK 74 (200)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCcchhHHHHHHHHHHHHHHHHh
Confidence 4689999999999997 999999999998888754
No 219
>3u5r_E Uncharacterized protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, hypothetical protein; 2.05A {Sinorhizobium meliloti}
Probab=97.08 E-value=0.00035 Score=64.08 Aligned_cols=33 Identities=18% Similarity=0.168 Sum_probs=29.0
Q ss_pred CCC-cEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQE-PWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~-~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++ +|||.||++||++|+.+.|.|+++.+.+..
T Consensus 57 ~gk~~vll~F~a~~C~~C~~~~~~l~~l~~~~~~ 90 (218)
T 3u5r_E 57 KDSPALLVAFISNRCPFVVLIREALAKFAGDYAG 90 (218)
T ss_dssp TTCSEEEEEECCSSCHHHHTTHHHHHHHHHHHTT
T ss_pred CCCCeEEEEEECCCCccHHHHHHHHHHHHHHHHh
Confidence 455 599999999999999999999999888753
No 220
>2k8s_A Thioredoxin; dimer, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Nitrosomonas europaea}
Probab=97.07 E-value=0.00031 Score=53.80 Aligned_cols=26 Identities=12% Similarity=0.244 Sum_probs=22.1
Q ss_pred EEEEEeCCCChhhHhHHHHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~~~i 400 (414)
-++.||++|||+|+.+.|.++++++.
T Consensus 3 ~~~~f~~~~C~~C~~~~~~l~~~~~~ 28 (80)
T 2k8s_A 3 SKAIFYHAGCPVCVSAEQAVANAIDP 28 (80)
T ss_dssp EEEEEEECSCHHHHHHHHHHHHHSCT
T ss_pred ceEEEeCCCCCchHHHHHHHHHHHHh
Confidence 36789999999999999999886543
No 221
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=97.05 E-value=0.00043 Score=59.95 Aligned_cols=33 Identities=3% Similarity=-0.077 Sum_probs=29.0
Q ss_pred CCCc-EEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEP-WLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~-vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++. +||.|| |+||++|+...|.+.++.+.+..
T Consensus 27 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~ 61 (161)
T 3drn_A 27 IGKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKD 61 (161)
T ss_dssp TTTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHT
T ss_pred cCCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHH
Confidence 3455 999999 99999999999999999888853
No 222
>1wjk_A C330018D20RIK protein; glutaredoxin, thioredoxin fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=97.03 E-value=0.00022 Score=57.60 Aligned_cols=27 Identities=22% Similarity=0.375 Sum_probs=23.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
...++|+.|+++||++|+.+.|.++++
T Consensus 14 ~~~~~v~~f~~~~C~~C~~~~~~L~~l 40 (100)
T 1wjk_A 14 RALPVLTLFTKAPCPLCDEAKEVLQPY 40 (100)
T ss_dssp CCCCEEEEEECSSCHHHHHHHHHTSTT
T ss_pred CCCCEEEEEeCCCCcchHHHHHHHHHh
Confidence 456789999999999999999999864
No 223
>1eej_A Thiol:disulfide interchange protein; oxidoreductase, protein disulfide isomerase, protein folding, redox protein, redox-active center; HET: MES; 1.90A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1tjd_A 1jzd_A 1jzo_A 1g0t_A 2iyj_A
Probab=97.00 E-value=0.00036 Score=64.12 Aligned_cols=29 Identities=14% Similarity=0.244 Sum_probs=25.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
.++++|+.||++|||+|+.+.|.++++.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~l~~ 113 (216)
T 1eej_A 85 QEKHVITVFTDITCGYCHKLHEQMADYNA 113 (216)
T ss_dssp TCCEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHh
Confidence 46789999999999999999999988654
No 224
>1xzo_A BSSCO, hypothetical protein YPMQ; thioredoxin-like fold, structural genomics, montreal-kingsto bacterial structural genomics initiative, BSGI; 1.70A {Bacillus subtilis} SCOP: c.47.1.10 PDB: 1on4_A
Probab=96.97 E-value=0.00043 Score=60.11 Aligned_cols=34 Identities=18% Similarity=0.344 Sum_probs=30.6
Q ss_pred CCCcEEEEEeCCCCh-hhHhHHHHHHHHHHHHHHh
Q 015013 371 RQEPWLVVLYAPWCQ-FCQVIDVFMQIRFQIIALV 404 (414)
Q Consensus 371 ~~~~vlV~FyApWC~-~Ck~m~p~~ee~~~i~a~~ 404 (414)
.++++||.||++||+ +|+...|.+.++.+.+...
T Consensus 32 ~gk~vll~f~~~~C~~~C~~~~~~l~~l~~~~~~~ 66 (174)
T 1xzo_A 32 KGEVWLADFIFTNCETICPPMTAHMTDLQKKLKAE 66 (174)
T ss_dssp TTCCEEEEEECSCCSSCCCSHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEEcCCCcchhHHHHHHHHHHHHHhhhc
Confidence 568999999999999 9999999999998888653
No 225
>3hd5_A Thiol:disulfide interchange protein DSBA; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.35A {Bordetella parapertussis}
Probab=96.95 E-value=0.00028 Score=63.24 Aligned_cols=32 Identities=13% Similarity=0.232 Sum_probs=28.3
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++|+.||++|||+|+.+.|.++++.+.+.
T Consensus 24 ~~~~~vv~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (195)
T 3hd5_A 24 PGKIEVLEFFAYTCPHCAAIEPMVEDWAKTAP 55 (195)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTCC
T ss_pred CCCeEEEEEECCCCccHHHhhHHHHHHHHHCC
Confidence 57889999999999999999999998776654
No 226
>1we0_A Alkyl hydroperoxide reductase C; peroxiredoxin, AHPC, oxidoreductase; 2.90A {Amphibacillus xylanus} SCOP: c.47.1.10
Probab=96.91 E-value=0.0005 Score=61.06 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=30.0
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| ++||++|+.+.|.|+++.+.+..
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~ 63 (187)
T 1we0_A 30 KGKWSIVVFYPADFSFVCPTELEDVQKEYAELKK 63 (187)
T ss_dssp SSSEEEEEECSCTTCSSCTHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEECCCCCcchHHHHHHHHHHHHHHHH
Confidence 4589999999 99999999999999999888864
No 227
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=96.90 E-value=0.00063 Score=70.77 Aligned_cols=48 Identities=8% Similarity=0.080 Sum_probs=37.4
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+....++++.++++.. ......++.||++||++|+.+.|.+++++..+
T Consensus 99 ~~~~~~~~~~~~~i~~--~~~~~~i~~f~a~~C~~C~~~~~~l~~~a~~~ 146 (521)
T 1hyu_A 99 GHPSKEAQSLLEQIRD--IDGDFEFETYYSLSCHNCPDVVQALNLMAVLN 146 (521)
T ss_dssp TCCCCSCHHHHHHHHH--CCSCEEEEEEECTTCSSHHHHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHHh--cCCCcceEEEECCCCcCcHHHHHHHHHHHhHc
Confidence 3445677888877754 34567799999999999999999999876554
No 228
>2i3y_A Epididymal secretory glutathione peroxidase; thioredoxin fold, epididymal androgen related protein, struc genomics, structural genomics consortium; 2.00A {Homo sapiens}
Probab=96.90 E-value=0.00062 Score=62.90 Aligned_cols=32 Identities=13% Similarity=0.041 Sum_probs=28.3
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+++|||.|||+||++|+ ..|.|+++.+.++.
T Consensus 55 ~GKvvll~FwAt~C~~c~-e~p~L~~l~~~~~~ 86 (215)
T 2i3y_A 55 VGKHILFVNVATYCGLTA-QYPELNALQEELKP 86 (215)
T ss_dssp TTSEEEEEEECSSSGGGG-GHHHHHHHHHHHGG
T ss_pred CCCEEEEEEeCCCCCChH-hHHHHHHHHHHhcc
Confidence 568999999999999999 78899999888853
No 229
>1xvw_A Hypothetical protein RV2238C/MT2298; thioredoxin fold, oxidized cystein sulfenic acid, structural genomics, PSI; 1.90A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1xxu_A
Probab=96.84 E-value=0.00038 Score=59.74 Aligned_cols=31 Identities=16% Similarity=0.202 Sum_probs=26.6
Q ss_pred CCC-cEEEEEe-CCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQE-PWLVVLY-APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~-~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++ ++||.|| ++||++|+.+.|.+.++.+.+
T Consensus 34 ~gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~ 66 (160)
T 1xvw_A 34 RGAKNVLLVFFPLAFTGICQGELDQLRDHLPEF 66 (160)
T ss_dssp TTTCEEEEEECSCTTSSHHHHHHHHHHHTGGGT
T ss_pred cCCCCEEEEEECCCCCCchHHHHHHHHHHHHHH
Confidence 344 8999998 999999999999999876655
No 230
>1ego_A Glutaredoxin; electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 1egr_A 1grx_A* 1qfn_A
Probab=96.83 E-value=0.00083 Score=51.42 Aligned_cols=25 Identities=12% Similarity=0.190 Sum_probs=22.1
Q ss_pred EEEEeCCCChhhHhHHHHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~~~i 400 (414)
|+.|+++|||+|+.+.+.++++++.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~l~~~ 27 (85)
T 1ego_A 3 TVIFGRSGCPYCVRAKDLAEKLSNE 27 (85)
T ss_dssp EEEECCTTSTHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCCHHHHHHHHHHHHhc
Confidence 6789999999999999999986553
No 231
>2bmx_A Alkyl hydroperoxidase C; peroxiredoxin, antioxidant defense system, oxidoreductase, structural proteomics in EURO spine; 2.4A {Mycobacterium tuberculosis} SCOP: c.47.1.10
Probab=96.82 E-value=0.00057 Score=61.28 Aligned_cols=33 Identities=6% Similarity=-0.040 Sum_probs=29.6
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| ++||++|+.+.|.+.++.+.+..
T Consensus 44 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~ 77 (195)
T 2bmx_A 44 PGKWRVVFFWPKDFTFVCPTEIAAFSKLNDEFED 77 (195)
T ss_dssp TTCEEEEEECSCTTSCCCHHHHHHHHHTHHHHHT
T ss_pred CCCcEEEEEEcCCCCCCcHHHHHHHHHHHHHHHH
Confidence 4679999999 99999999999999998888753
No 232
>1zof_A Alkyl hydroperoxide-reductase; decamer, toroide-shaped complex, oxidoreductase; 2.95A {Helicobacter pylori} SCOP: c.47.1.10
Probab=96.80 E-value=0.00053 Score=61.56 Aligned_cols=33 Identities=6% Similarity=0.137 Sum_probs=29.9
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| ++||++|+.+.|.+.++.+.+..
T Consensus 32 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~ 65 (198)
T 1zof_A 32 GKNGVILFFWPKDFTFVCPTEIIAFDKRVKDFHE 65 (198)
T ss_dssp CSSEEEEEECSCTTCSSCCTHHHHHHHTHHHHHH
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHHHHHHHHH
Confidence 4689999999 99999999999999999888864
No 233
>1qmv_A Human thioredoxin peroxidase-B; peroxiredoxin, sulphinic acid; 1.7A {Homo sapiens} SCOP: c.47.1.10 PDB: 1qq2_A 2z9s_A 2rii_A 3hy2_A*
Probab=96.75 E-value=0.00089 Score=60.07 Aligned_cols=33 Identities=6% Similarity=0.019 Sum_probs=29.5
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| ++||++|+.+.|.|.++.+.+..
T Consensus 33 ~gk~vvl~F~~a~~C~~C~~~~~~l~~l~~~~~~ 66 (197)
T 1qmv_A 33 KGKYVVLFFYPLDFTFVAPTEIIAFSNRAEDFRK 66 (197)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHHT
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4589999999 99999999999999998888753
No 234
>1xvq_A Thiol peroxidase; thioredoxin fold, structural genomics, PSI, protein structur initiative, TB structural genomics consortium, TBSGC; 1.75A {Mycobacterium tuberculosis} SCOP: c.47.1.10 PDB: 1y25_A
Probab=96.73 E-value=0.00071 Score=59.60 Aligned_cols=30 Identities=13% Similarity=0.172 Sum_probs=27.0
Q ss_pred CCCcEEEEEeCCC-ChhhHhHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPW-CQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 371 ~~~~vlV~FyApW-C~~Ck~m~p~~ee~~~i 400 (414)
.++++||.||++| |++|+...|.|.++.+.
T Consensus 43 ~gk~vvl~F~~t~~C~~C~~~~~~l~~l~~~ 73 (175)
T 1xvq_A 43 RGKSVLLNIFPSVDTPVCATSVRTFDERAAA 73 (175)
T ss_dssp TTSCEEEEECSCCCSSCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEeCCCCchHHHHHHHHHHHHhh
Confidence 4679999999999 99999999999998765
No 235
>2r37_A Glutathione peroxidase 3; plasma, structural genomics consort oxidoreductase, secreted, selenium, selenocysteine; 1.85A {Homo sapiens}
Probab=96.71 E-value=0.00093 Score=61.20 Aligned_cols=32 Identities=13% Similarity=-0.063 Sum_probs=27.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.+++|||.|||+||++| ...|.|+++.+.+..
T Consensus 37 kGKvvll~F~At~C~~c-~e~p~L~~l~~~~~~ 68 (207)
T 2r37_A 37 AGKYVLFVNVASYGGLT-GQYIELNALQEELAP 68 (207)
T ss_dssp TTSEEEEEEECSSSTTT-THHHHHHHHHHHHGG
T ss_pred CCCEEEEEEeCCCCCCh-HHHHHHHHHHHHhcc
Confidence 56899999999999999 567899999888853
No 236
>3uem_A Protein disulfide-isomerase; thioredoxin-like domain, chaper; 2.29A {Homo sapiens} PDB: 2k18_A 1x5c_A 1bjx_A 2bjx_A
Probab=96.69 E-value=0.0009 Score=65.63 Aligned_cols=49 Identities=0% Similarity=-0.082 Sum_probs=41.4
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
+.|..++.++++.+.. +..++++|.||++||++|+.+.|.|+++++.+-
T Consensus 117 p~v~~~~~~~~~~~~~--~~~~~~~v~F~~~~~~~~~~~~~~~~~~A~~~~ 165 (361)
T 3uem_A 117 PLVIEFTEQTAPKIFG--GEIKTHILLFLPKSVSDYDGKLSNFKTAAESFK 165 (361)
T ss_dssp CSEEECSTTTHHHHHS--CSCCEEEEEECCSSSSSHHHHHHHHHHHHGGGT
T ss_pred CcceecCcccHHHHhc--CCCCcEEEEEEeCCchhHHHHHHHHHHHHHHcc
Confidence 5688899999998775 455678999999999999999999999776653
No 237
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=96.64 E-value=0.0017 Score=55.85 Aligned_cols=33 Identities=3% Similarity=-0.105 Sum_probs=29.5
Q ss_pred CCCcEEEEEeC-CCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYA-PWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyA-pWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||+ +||++|+...|.+.++.+.+..
T Consensus 34 ~gk~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~ 67 (163)
T 3gkn_A 34 AGHWLVIYFYPKDSTPGATTEGLDFNALLPEFDK 67 (163)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCCcHHHHHHHHHHHHHHHHH
Confidence 45699999998 9999999999999999888864
No 238
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=96.64 E-value=0.008 Score=64.20 Aligned_cols=63 Identities=16% Similarity=0.158 Sum_probs=48.0
Q ss_pred HHHcC-CcEEEEechHHHHHHH-HH--------HHhcCCC---------------------------------eEEEEEe
Q 015013 108 LEKFG-NDIAIAFSGAEDVALI-EY--------AHLTGRP---------------------------------FRVFSLD 144 (414)
Q Consensus 108 ~~~~~-~~i~vafSGGKDSvlL-~L--------~~~~~~~---------------------------------i~VvflD 144 (414)
+.+.+ ++++|++|||-||+++ .| +...+.+ +..+|+.
T Consensus 298 ~~~~g~~~vvlglSGGvDSsv~A~Lv~~~~~~a~~alG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~m~ 377 (634)
T 3ilv_A 298 MRKSRSKGFVLSLSGGADSSACAIMVAEMIRKGLKELGLTAFLQKSNMETLFDLPALQHLPFEEQAKKITAVFLTTAYQS 377 (634)
T ss_dssp HHHTTCCSEEEECCSSHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTCGGGCCSSCSSCTTSHHHHHHHHHHHEEEEEEE
T ss_pred HHHhCCCeEEEEccCCHHHHHHHHHHHHHHHHHHHHhCchhhhhhhhcccccccccccccccccchhHhhhheeeeeecC
Confidence 34444 5799999999999864 33 1234543 6678888
Q ss_pred CCCCcHHHHHHHHHHHHHhCCcEEEE
Q 015013 145 TGRLNPETYRFFDEVEKHFGIRIEYM 170 (414)
Q Consensus 145 TG~~fpET~~~v~~l~~~~gl~i~~~ 170 (414)
+-..-.++++-.+++++.+|++..++
T Consensus 378 ~~~ss~~~~~dA~~la~~LGi~~~~I 403 (634)
T 3ilv_A 378 TRNSGDETYTSAKTLAESIGATFYNW 403 (634)
T ss_dssp CTTCCSHHHHHHHHHHHHHTCEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCcEEEE
Confidence 87777899999999999999987766
No 239
>3hz8_A Thiol:disulfide interchange protein DSBA; thiol-oxidoreductase, disulfide bond; 1.45A {Neisseria meningitidis MC58} PDB: 3dvw_A 3a3t_A
Probab=96.64 E-value=0.00058 Score=61.61 Aligned_cols=32 Identities=6% Similarity=0.284 Sum_probs=27.7
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||+|+.+|||+|+.+.|.++++.+.+.
T Consensus 23 ~~~v~vv~f~d~~Cp~C~~~~~~l~~~~~~~~ 54 (193)
T 3hz8_A 23 AGKVEVLEFFGYFCPHCAHLEPVLSKHAKSFK 54 (193)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHTTCC
T ss_pred CCCcEEEEEECCCChhHHHHHHHHHHHHHHCC
Confidence 46889999999999999999999988766543
No 240
>3h93_A Thiol:disulfide interchange protein DSBA; disulfide bond, redox-active center, transcription regulator; HET: MSE GOL; 1.50A {Pseudomonas aeruginosa PAO1} SCOP: c.47.1.0
Probab=96.58 E-value=0.0008 Score=60.05 Aligned_cols=32 Identities=13% Similarity=0.123 Sum_probs=28.1
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..+++|+.|+.+|||+|+.+.|.++++.+.+.
T Consensus 24 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 55 (192)
T 3h93_A 24 PGKIEVVELFWYGCPHCYAFEPTIVPWSEKLP 55 (192)
T ss_dssp TTSEEEEEEECTTCHHHHHHHHHHHHHHHTCC
T ss_pred CCCCEEEEEECCCChhHHHhhHHHHHHHHhCC
Confidence 56889999999999999999999988766654
No 241
>1t3b_A Thiol:disulfide interchange protein DSBC; oxidoreductase, protein disulfide isomerase, protein folding, redox protein; 2.50A {Haemophilus influenzae} SCOP: c.47.1.9 d.17.3.1
Probab=96.55 E-value=0.0013 Score=60.24 Aligned_cols=29 Identities=10% Similarity=0.336 Sum_probs=25.5
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
..+++|+.|+.+|||+|+.+.|.++++.+
T Consensus 85 ~~k~~vv~F~d~~Cp~C~~~~~~l~~~~~ 113 (211)
T 1t3b_A 85 NEKHVVTVFMDITCHYCHLLHQQLKEYND 113 (211)
T ss_dssp TCSEEEEEEECTTCHHHHHHHTTHHHHHH
T ss_pred CCCEEEEEEECCCCHhHHHHHHHHHHHHh
Confidence 46789999999999999999999988543
No 242
>2ywm_A Glutaredoxin-like protein; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 2.30A {Aquifex aeolicus} PDB: 2ayt_A
Probab=96.54 E-value=0.0018 Score=59.07 Aligned_cols=32 Identities=16% Similarity=0.081 Sum_probs=26.6
Q ss_pred cCCCcEEEEEe-----CCCChhhHhHHHHHHHHHHHH
Q 015013 370 HRQEPWLVVLY-----APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 370 ~~~~~vlV~Fy-----ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+..++|+|.|| +|||++|+.+.|.|+++++.+
T Consensus 18 ~~~~~v~v~~~~~~~~~~~C~~c~~~~~~~~~~a~~~ 54 (229)
T 2ywm_A 18 EFKEPVSIKLFSQAIGCESCQTAEELLKETVEVIGEA 54 (229)
T ss_dssp HCCSCEEEEEECCCTTCGGGGHHHHHHHHHHHHHHHH
T ss_pred hccCCeEEEEEccCCCCcccHHHHHHHHHHHHHHhcc
Confidence 46678887777 999999999999999986555
No 243
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=96.53 E-value=0.0049 Score=66.41 Aligned_cols=69 Identities=16% Similarity=0.181 Sum_probs=46.5
Q ss_pred HHHHHHHHHcC-CcEEEEechHHHHHHH-HHHHh----cC---CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 015013 102 EIMDRALEKFG-NDIAIAFSGAEDVALI-EYAHL----TG---RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 170 (414)
Q Consensus 102 eil~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~----~~---~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~ 170 (414)
..|+..+++.+ .+++|++|||.||++. .++.+ .+ .++..++++....-+++++.++++++.+|++++++
T Consensus 350 ~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~~~~~~~~~~A~~la~~lgi~~~~i 427 (680)
T 3sdb_A 350 SGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGFATGEHTKNNAIKLARALGVTFSEI 427 (680)
T ss_dssp HHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC--------CHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCCCCCHHHHHHHHHHHHHcCCCEEEE
Confidence 44555566655 5799999999999863 44433 23 46888999987777889999999999999997765
No 244
>1uul_A Tryparedoxin peroxidase homologue; peroxiredoxin, oxidoreductase; 2.8A {Trypanosoma cruzi} SCOP: c.47.1.10
Probab=96.49 E-value=0.0017 Score=58.48 Aligned_cols=32 Identities=9% Similarity=0.167 Sum_probs=29.0
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|| ++||++|+...|.|.++.+.+.
T Consensus 35 ~gk~vvl~F~~~~~C~~C~~~~~~l~~l~~~~~ 67 (202)
T 1uul_A 35 KGKWLVLFFYPMDFTFVCPTEICQFSDRVKEFS 67 (202)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHH
Confidence 4579999999 9999999999999999888875
No 245
>2h01_A 2-Cys peroxiredoxin; thioredoxin peroxidase, structural genomics, SGC, structural genomics consortium, oxidoreductase; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10
Probab=96.49 E-value=0.0012 Score=58.92 Aligned_cols=32 Identities=9% Similarity=0.174 Sum_probs=29.1
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|| ++||++|+.+.|.|.++.+.+.
T Consensus 30 ~gk~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~ 62 (192)
T 2h01_A 30 GKKYVLLYFYPLDFTFVCPSEIIALDKALDSFK 62 (192)
T ss_dssp TTCEEEEEECSCSSCSSCCHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 4679999999 9999999999999999888875
No 246
>3ztl_A Thioredoxin peroxidase; oxidoreductase, reductase, schistosomiasis, thioredoxin fold; 3.00A {Schistosoma mansoni} PDB: 3zvj_A 3zvj_D
Probab=96.48 E-value=0.0017 Score=59.77 Aligned_cols=32 Identities=9% Similarity=0.187 Sum_probs=29.2
Q ss_pred CCCcEEEEEeC-CCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYA-PWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyA-pWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||+ +||++|+...|.+.++.+.+.
T Consensus 68 ~Gk~vll~F~a~~wC~~C~~~~p~l~~l~~~~~ 100 (222)
T 3ztl_A 68 RGKYVVLFFYPADFTFVCPTEIIAFSDQVEEFN 100 (222)
T ss_dssp TTSEEEEEECSCSSCSHHHHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 46899999997 999999999999999988885
No 247
>3gyk_A 27KDA outer membrane protein; APC61738.2, silicibacter pomeroyi DSS-3, thioredoxin-like, oxidoreductase, structural genomics, PSI-2; HET: MSE; 1.76A {Silicibacter pomeroyi}
Probab=96.48 E-value=0.0023 Score=55.97 Aligned_cols=32 Identities=13% Similarity=0.151 Sum_probs=28.0
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..+++|+.|+.+|||+|+.+.|.++++.+.++
T Consensus 21 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~~ 52 (175)
T 3gyk_A 21 EGDVTVVEFFDYNCPYCRRAMAEVQGLVDADP 52 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHCT
T ss_pred CCCEEEEEEECCCCccHHHHHHHHHHHHHhCC
Confidence 56789999999999999999999998877543
No 248
>1kte_A Thioltransferase; redox-active center, electron transport, acetylation; 2.20A {Sus scrofa} SCOP: c.47.1.1 PDB: 1jhb_A 1b4q_A*
Probab=96.45 E-value=0.0028 Score=50.65 Aligned_cols=23 Identities=26% Similarity=0.566 Sum_probs=20.3
Q ss_pred EEEEEeCCCChhhHhHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
.++.|+++|||+|+.+.+.|+++
T Consensus 13 ~v~~f~~~~C~~C~~~~~~L~~~ 35 (105)
T 1kte_A 13 KVVVFIKPTCPFCRKTQELLSQL 35 (105)
T ss_dssp CEEEEECSSCHHHHHHHHHHHHS
T ss_pred CEEEEEcCCCHhHHHHHHHHHHc
Confidence 36779999999999999999874
No 249
>2i81_A 2-Cys peroxiredoxin; structural genomics consortium, SGC, oxidoreductase; 2.45A {Plasmodium vivax sai-1} PDB: 2h66_A
Probab=96.45 E-value=0.0018 Score=59.27 Aligned_cols=32 Identities=9% Similarity=0.180 Sum_probs=29.2
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|| ++||++|+...|.|.++++.+.
T Consensus 51 ~gk~vvl~F~pa~~C~~C~~~~~~l~~l~~~~~ 83 (213)
T 2i81_A 51 GKKYVLLYFYPLDFTFVCPSEIIALDKALDAFH 83 (213)
T ss_dssp TTCEEEEEECSCTTSSHHHHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEEcCCCCCCCHHHHHHHHHHHHHHH
Confidence 4579999999 9999999999999999988875
No 250
>1h75_A Glutaredoxin-like protein NRDH; electron transport, thioredoxin, redox protein; 1.7A {Escherichia coli} SCOP: c.47.1.1
Probab=96.38 E-value=0.0022 Score=48.69 Aligned_cols=22 Identities=18% Similarity=0.320 Sum_probs=19.8
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
++.|+++||++|+.+.+.+++.
T Consensus 3 v~~f~~~~C~~C~~~~~~l~~~ 24 (81)
T 1h75_A 3 ITIYTRNDCVQCHATKRAMENR 24 (81)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEcCCCChhHHHHHHHHHHC
Confidence 5779999999999999999873
No 251
>1q98_A Thiol peroxidase, TPX; structural genomics, NYSGXRC, PSI, protein structure initiative; 1.90A {Haemophilus influenzae} SCOP: c.47.1.10
Probab=96.36 E-value=0.0013 Score=57.17 Aligned_cols=31 Identities=3% Similarity=-0.008 Sum_probs=27.3
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.|| +.||++|....|.|.++.+.+
T Consensus 42 ~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~ 73 (165)
T 1q98_A 42 ASKRKVLNIFPSIDTGVCATSVRKFNQQAAKL 73 (165)
T ss_dssp TTSEEEEEECSCSCSSCCCHHHHHHHHHHHHS
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHc
Confidence 4578999999 899999999999999887765
No 252
>1tp9_A Peroxiredoxin, PRX D (type II); oligomer, thioredoxin fold, oxidoreductase; 1.62A {Populus trichocarpa} SCOP: c.47.1.10
Probab=96.34 E-value=0.0035 Score=54.45 Aligned_cols=33 Identities=3% Similarity=-0.108 Sum_probs=28.9
Q ss_pred CCCcEEEEEe-CCCChhhH-hHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQ-VIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck-~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| +.||++|. .-.|.|.++++.+..
T Consensus 34 ~gk~vvl~f~~~~~c~~C~~~e~~~l~~~~~~~~~ 68 (162)
T 1tp9_A 34 AGKKVILFGVPGAFTPTCSLKHVPGFIEKAGELKS 68 (162)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4678999999 99999999 899999998888753
No 253
>2c0d_A Thioredoxin peroxidase 2; peroxiredoxin, 2-Cys, thioredoxin dependant, mitochondrial, antioxidant, oxidoreductase, redox-active center; 1.78A {Plasmodium falciparum}
Probab=96.33 E-value=0.0019 Score=59.64 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=29.5
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| |.||++|+...|.|.++.+.+..
T Consensus 55 ~Gk~vvl~F~patwCp~C~~e~p~l~~l~~~~~~ 88 (221)
T 2c0d_A 55 GQKYCCLLFYPLNYTFVCPTEIIEFNKHIKDFEN 88 (221)
T ss_dssp TTCEEEEEECCCCTTTCCHHHHHHHHHTHHHHHH
T ss_pred CCCeEEEEEEcCCCCCchHHHHHHHHHHHHHHHH
Confidence 4679999999 99999999999999999888753
No 254
>2pn8_A Peroxiredoxin-4; thioredoxin, oxidoreductase, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=96.33 E-value=0.0023 Score=58.44 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=28.9
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|| +.||++|....|.|.++.+.+.
T Consensus 47 ~Gk~vvl~F~pat~C~~C~~e~~~l~~l~~~~~ 79 (211)
T 2pn8_A 47 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 79 (211)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 4679999999 9999999999999999888775
No 255
>1zye_A Thioredoxin-dependent peroxide reductase; catenane, dodecamer, peroxiredoxin, oxidoreductase; 3.30A {Bos taurus} SCOP: c.47.1.10
Probab=96.33 E-value=0.0023 Score=58.82 Aligned_cols=33 Identities=6% Similarity=0.093 Sum_probs=29.6
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| ++||++|+...|.|.++.+.+..
T Consensus 55 ~Gk~vll~F~pa~~Cp~C~~~~~~l~~l~~~~~~ 88 (220)
T 1zye_A 55 KGKYLVLFFYPLDFTFVCPTEIIAFSDKASEFHD 88 (220)
T ss_dssp TTSEEEEEECSCTTCSSSHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4589999999 99999999999999999888753
No 256
>2yzh_A Probable thiol peroxidase; redox protein, antioxidant, oxidoreductase, STRU genomics, NPPSFA; 1.85A {Aquifex aeolicus}
Probab=96.29 E-value=0.0014 Score=57.27 Aligned_cols=31 Identities=3% Similarity=-0.020 Sum_probs=26.7
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.|| +.||++|+...|.+.++.+.+
T Consensus 46 ~gk~vvl~f~~~~~C~~C~~~~~~l~~~~~~~ 77 (171)
T 2yzh_A 46 KDVVQVIITVPSLDTPVCETETKKFNEIMAGM 77 (171)
T ss_dssp CSSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHc
Confidence 4678999999 899999999999999876554
No 257
>2cq9_A GLRX2 protein, glutaredoxin 2; glutathione-S-transferase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.26 E-value=0.0027 Score=53.59 Aligned_cols=23 Identities=9% Similarity=0.333 Sum_probs=19.7
Q ss_pred cEEEEEeCCCChhhHhHHHHHHHH
Q 015013 374 PWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 374 ~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
.++| |+++||++|+.+.+.|+++
T Consensus 28 ~vvv-f~~~~Cp~C~~~~~~L~~~ 50 (130)
T 2cq9_A 28 CVVI-FSKTSCSYCTMAKKLFHDM 50 (130)
T ss_dssp SEEE-EECSSCSHHHHHHHHHHHH
T ss_pred cEEE-EEcCCChHHHHHHHHHHHc
Confidence 3444 9999999999999999975
No 258
>1psq_A Probable thiol peroxidase; structural genomics, NYSGXRC, PSI, structure initiative, NEW YORK SGX research center for STRU genomics; 2.30A {Streptococcus pneumoniae} SCOP: c.47.1.10
Probab=96.26 E-value=0.0015 Score=56.66 Aligned_cols=31 Identities=3% Similarity=-0.042 Sum_probs=26.5
Q ss_pred CCCcEEEEEeC-CCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYA-PWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyA-pWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.||+ .||++|....|.|.++.+.+
T Consensus 41 ~gk~vvl~F~~~~~c~~C~~~~~~l~~~~~~~ 72 (163)
T 1psq_A 41 DGKKKVLSVVPSIDTGICSTQTRRFNEELAGL 72 (163)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEEEECCCCCCccHHHHHHHHHHHHHc
Confidence 46799999995 99999999999999876554
No 259
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=96.23 E-value=0.003 Score=55.84 Aligned_cols=32 Identities=3% Similarity=-0.022 Sum_probs=28.6
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|| +.||++|....|.|+++.+.+.
T Consensus 50 ~Gk~vvl~f~~~~~c~~C~~el~~l~~l~~~~~ 82 (179)
T 3ixr_A 50 TNQWLVLYFYPKDNTPGSSTEGLEFNLLLPQFE 82 (179)
T ss_dssp TTSEEEEEECSCTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHH
Confidence 4678999998 9999999999999999988875
No 260
>2a4v_A Peroxiredoxin DOT5; yeast nuclear thiol peroxidase, atypical 2-Cys peroxiredoxin, oxidoreductase; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10
Probab=96.23 E-value=0.0036 Score=53.78 Aligned_cols=31 Identities=6% Similarity=-0.045 Sum_probs=27.0
Q ss_pred CCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 372 QEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 372 ~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.+++||.|| +.||++|+...|.|.++.+.+.
T Consensus 35 ~~~vvl~f~~~~~c~~C~~~~~~l~~~~~~~~ 66 (159)
T 2a4v_A 35 NRVVVFFVYPRASTPGSTRQASGFRDNYQELK 66 (159)
T ss_dssp CSEEEEEECSSSSSHHHHHHHHHHHHHHHHHT
T ss_pred CCeEEEEEcCCCCCCCHHHHHHHHHHHHHHHH
Confidence 347889987 9999999999999999888775
No 261
>1n8j_A AHPC, alkyl hydroperoxide reductase C22 protein; peroxiredoxin, decamer, antioxidant, peroxidase, AHPF, oxidoreductase; 2.17A {Salmonella typhimurium} SCOP: c.47.1.10 PDB: 1yep_A 1yf1_A 1yf0_A 1yex_A 3emp_A
Probab=96.21 E-value=0.0037 Score=55.65 Aligned_cols=33 Identities=3% Similarity=-0.081 Sum_probs=29.0
Q ss_pred CCCcEEEEEeC-CCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYA-PWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyA-pWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||.||+ .||++|+...|.|.++.+.+..
T Consensus 29 ~Gk~vvl~F~~~~~Cp~C~~e~~~l~~~~~~~~~ 62 (186)
T 1n8j_A 29 EGRWSVFFFYPADFTFVSPTELGDVADHYEELQK 62 (186)
T ss_dssp TTSEEEEEECSCTTCSHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCCCccHHHHHHHHHHHHHHHH
Confidence 45799999995 9999999999999999888753
No 262
>3feu_A Putative lipoprotein; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Vibrio fischeri} SCOP: c.47.1.0
Probab=96.21 E-value=0.0021 Score=57.62 Aligned_cols=30 Identities=17% Similarity=0.299 Sum_probs=27.9
Q ss_pred CCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
++++||+|+..|||+|+.+.|.++++.+.+
T Consensus 22 ~~~~vvef~d~~Cp~C~~~~~~~~~~~~~~ 51 (185)
T 3feu_A 22 GMAPVTEVFALSCGHCRNMENFLPVISQEA 51 (185)
T ss_dssp CCCSEEEEECTTCHHHHHHGGGHHHHHHHH
T ss_pred CCCEEEEEECCCChhHHHhhHHHHHHHHHh
Confidence 578999999999999999999999988876
No 263
>2wfc_A Peroxiredoxin 5, PRDX5; oxidoreductase, antioxidant enzymes; 1.75A {Arenicola marina}
Probab=96.21 E-value=0.0038 Score=54.88 Aligned_cols=33 Identities=3% Similarity=-0.270 Sum_probs=27.8
Q ss_pred CCCcEEEEEe-CCCChhhHh-HHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQV-IDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~-m~p~~ee~~~i~a~ 403 (414)
.++++||.|| +.||++|+. -.|.|+++++.+..
T Consensus 30 ~Gk~vvl~f~~a~wcp~C~~~e~p~l~~~~~~~~~ 64 (167)
T 2wfc_A 30 AGKKGVLFAVPGAFTPGSSKTHLPGYVEQAAAIHG 64 (167)
T ss_dssp TTSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4567888887 999999999 99999998887753
No 264
>2hls_A Protein disulfide oxidoreductase; thioredoxin fold; 1.93A {Aeropyrum pernix}
Probab=96.18 E-value=0.0034 Score=58.64 Aligned_cols=38 Identities=13% Similarity=0.192 Sum_probs=31.3
Q ss_pred chHHHHhhhcCCCcEEEEEeCCC--ChhhHhHHHHHHHHHHH
Q 015013 361 GMENLARLDHRQEPWLVVLYAPW--CQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 361 ~~e~~v~~~~~~~~vlV~FyApW--C~~Ck~m~p~~ee~~~i 400 (414)
.+..++. +..++|+|.||++| |++|+.+.|.++++++.
T Consensus 16 ql~~~~~--~~~~pv~v~~~~~~~~c~~c~~~~~~l~ela~~ 55 (243)
T 2hls_A 16 ELRETLA--EMVNPVEVHVFLSKSGCETCEDTLRLMKLFEEE 55 (243)
T ss_dssp HHHHHHT--TCCSCEEEEEEECSSSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHH--hCCCCEEEEEEeCCCCCCchHHHHHHHHHHHHh
Confidence 3444443 56789999999999 99999999999998765
No 265
>2pwj_A Mitochondrial peroxiredoxin; alpha and beta protein, oxidoreductase; 2.80A {Pisum sativum}
Probab=96.08 E-value=0.0027 Score=55.94 Aligned_cols=32 Identities=6% Similarity=0.013 Sum_probs=27.3
Q ss_pred CCcEEEEEeCCCChhhHhH-HHHHHHHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQVI-DVFMQIRFQIIAL 403 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~m-~p~~ee~~~i~a~ 403 (414)
.+.||+.||+.||++|+.- .|.|.++++.+..
T Consensus 44 k~vvl~~~~a~wcp~C~~eh~p~l~~~~~~~~~ 76 (171)
T 2pwj_A 44 KKVVIFGLPGAYTGVCSSKHVPPYKHNIDKFKA 76 (171)
T ss_dssp SEEEEEECSCTTCTTHHHHTHHHHHHTHHHHHH
T ss_pred CCEEEEEecCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 3577889999999999998 9999998888753
No 266
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=96.04 E-value=0.0054 Score=56.75 Aligned_cols=33 Identities=6% Similarity=-0.008 Sum_probs=29.0
Q ss_pred CCCcEEEEEe-CCCChhhH-hHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQ-VIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck-~m~p~~ee~~~i~a~ 403 (414)
.++++||.|| |.||++|+ .-.|.|.++++.+..
T Consensus 32 ~gk~vvl~f~~a~~cp~C~~~e~~~l~~~~~~~~~ 66 (241)
T 1nm3_A 32 DNKTVIVFSLPGAFTPTCSSSHLPRYNELAPVFKK 66 (241)
T ss_dssp TTSEEEEEEESCSSCHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEeCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 4678999999 99999999 899999999888753
No 267
>3me7_A Putative uncharacterized protein; electron transfer protein, electron transport, structural GE PSI-2, protein structure initiative; 1.50A {Aquifex aeolicus} PDB: 3me8_A
Probab=95.91 E-value=0.0048 Score=54.05 Aligned_cols=32 Identities=13% Similarity=0.301 Sum_probs=28.3
Q ss_pred CCCcEEEEEeCCCCh-hhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQ-FCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyApWC~-~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||++||+ .|....|.++++.+.+.
T Consensus 27 ~Gk~vll~F~~t~C~~~C~~~~~~l~~~~~~~~ 59 (170)
T 3me7_A 27 KGKPIILSPIYTHCRAACPLITKSLLKVIPKLG 59 (170)
T ss_dssp TTSCEEEEEECTTCCSHHHHHHHHHHTTHHHHC
T ss_pred CCCEEEEEEECCCCCchhHHHHHHHHHHHHHhh
Confidence 468999999999997 69999999999888773
No 268
>1r7h_A NRDH-redoxin; thioredoxin, glutaredoxin, redox protein, domain swapping, electron transport; 2.69A {Corynebacterium ammoniagenes} SCOP: c.47.1.1
Probab=95.89 E-value=0.0047 Score=45.76 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=19.8
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
++.|+++||++|+.+.+.++++
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (75)
T 1r7h_A 3 ITLYTKPACVQCTATKKALDRA 24 (75)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 5779999999999999999874
No 269
>2ht9_A Glutaredoxin-2; thioredoxin fold, iron-sulfur cluster, 2Fe2S, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: GSH; 1.90A {Homo sapiens} PDB: 2fls_A*
Probab=95.87 E-value=0.0059 Score=52.82 Aligned_cols=23 Identities=9% Similarity=0.333 Sum_probs=19.7
Q ss_pred cEEEEEeCCCChhhHhHHHHHHHH
Q 015013 374 PWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 374 ~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
.|+| |+++|||+|+.+.+.|+++
T Consensus 50 ~Vvv-f~~~~Cp~C~~~k~~L~~~ 72 (146)
T 2ht9_A 50 CVVI-FSKTSCSYCTMAKKLFHDM 72 (146)
T ss_dssp SEEE-EECTTCHHHHHHHHHHHHH
T ss_pred CEEE-EECCCChhHHHHHHHHHHc
Confidence 4444 9999999999999999975
No 270
>4hde_A SCO1/SENC family lipoprotein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; HET: MSE; 1.32A {Bacillus anthracis}
Probab=95.72 E-value=0.0091 Score=52.43 Aligned_cols=33 Identities=15% Similarity=0.313 Sum_probs=28.8
Q ss_pred CCCcEEEEEeCCCCh-hhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQ-FCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~-~Ck~m~p~~ee~~~i~a~ 403 (414)
.+++|||.||++||+ .|....+.+.++.+.+..
T Consensus 31 ~Gk~vll~F~~t~Cp~~Cp~~~~~l~~l~~~~~~ 64 (170)
T 4hde_A 31 KGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKE 64 (170)
T ss_dssp TTSCEEEEEECTTCSSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCcccHHHHHHHHHHHhhhc
Confidence 678999999999997 799999999988777754
No 271
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=95.66 E-value=0.0053 Score=50.05 Aligned_cols=22 Identities=18% Similarity=0.769 Sum_probs=19.7
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
|+.|+++|||+|+.+.+.|+++
T Consensus 21 v~vy~~~~Cp~C~~~~~~L~~~ 42 (113)
T 3rhb_A 21 VVIYSKTWCSYCTEVKTLFKRL 42 (113)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEECCCChhHHHHHHHHHHc
Confidence 6669999999999999999874
No 272
>2hze_A Glutaredoxin-1; thioredoxin fold, arsenic, dimethylarsenite., electron trans oxidoreductase; 1.80A {Ectromelia virus} PDB: 2hzf_A 2hze_B
Probab=95.65 E-value=0.0047 Score=50.61 Aligned_cols=25 Identities=12% Similarity=0.214 Sum_probs=21.2
Q ss_pred CcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 373 EPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 373 ~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
...|+.|+++|||+|+.+.+.|+++
T Consensus 18 ~~~vv~f~~~~Cp~C~~~~~~L~~~ 42 (114)
T 2hze_A 18 NNKVTIFVKYTCPFCRNALDILNKF 42 (114)
T ss_dssp TTCEEEEECTTCHHHHHHHHHHTTS
T ss_pred cCCEEEEEeCCChhHHHHHHHHHHc
Confidence 3457789999999999999998863
No 273
>3p7x_A Probable thiol peroxidase; thioredoxin fold, oxidoreductase; HET: PG4; 1.96A {Staphylococcus aureus} SCOP: c.47.1.0
Probab=95.60 E-value=0.0047 Score=53.59 Aligned_cols=30 Identities=7% Similarity=-0.065 Sum_probs=25.6
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i 400 (414)
.++++||.|| +.||++|....|.|+++++.
T Consensus 45 ~Gk~vvl~f~~~~~c~~C~~~~~~l~~~~~~ 75 (166)
T 3p7x_A 45 AGKKKLISVVPSIDTGVCDQQTRKFNSDASK 75 (166)
T ss_dssp TTSCEEEEECSCTTSHHHHHHHHHHHHHSCT
T ss_pred CCCcEEEEEECCCCCCccHHHHHHHHHHhhc
Confidence 4678999999 88999999999999987544
No 274
>3zrd_A Thiol peroxidase; oxidoreductase, 2Cys peroxiredoxin, thioredoxin-fold, ROS PR; 1.74A {Yersinia pseudotuberculosis} PDB: 2xpe_A 2xpd_A 3zre_A 2yjh_A 4af2_A 3hvs_A* 1qxh_A* 3i43_A* 3hvv_A 3hvx_A
Probab=95.53 E-value=0.0044 Score=56.09 Aligned_cols=31 Identities=3% Similarity=-0.075 Sum_probs=27.4
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.|| +.||++|....|.|+++.+.+
T Consensus 77 ~Gk~vvl~F~~~~~c~~C~~e~~~l~~l~~~~ 108 (200)
T 3zrd_A 77 AGKRKVLNIFPSIDTGVCAASVRKFNQLAGEL 108 (200)
T ss_dssp TTSEEEEEECSCCCCSCCCHHHHHHHHHHHTS
T ss_pred CCCcEEEEEECCCCCchhHHHHHHHHHHHHHh
Confidence 4678999999 789999999999999987766
No 275
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=95.46 E-value=0.013 Score=47.11 Aligned_cols=23 Identities=13% Similarity=0.274 Sum_probs=19.2
Q ss_pred cEEEEEeC-----CCChhhHhHHHHHHHH
Q 015013 374 PWLVVLYA-----PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 374 ~vlV~FyA-----pWC~~Ck~m~p~~ee~ 397 (414)
.|+| |++ +|||+|+++.+.|+++
T Consensus 18 ~vvv-f~~g~~~~~~C~~C~~~~~~L~~~ 45 (105)
T 2yan_A 18 SVML-FMKGNKQEAKCGFSKQILEILNST 45 (105)
T ss_dssp SEEE-EESBCSSSBCTTHHHHHHHHHHHH
T ss_pred CEEE-EEecCCCCCCCccHHHHHHHHHHC
Confidence 4554 777 9999999999999875
No 276
>4g2e_A Peroxiredoxin; redox protein, structural genomics, NPPSFA, national project protein structural and functional analyses; 1.40A {Sulfolobus tokodaii} PDB: 2ywn_A 3hjp_A
Probab=95.45 E-value=0.0014 Score=56.80 Aligned_cols=31 Identities=13% Similarity=0.237 Sum_probs=20.2
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
.++++||.|| +.||++|+...|.|.++.+.+
T Consensus 29 ~Gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~ 60 (157)
T 4g2e_A 29 KGKVVVLAFYPAAFTQVCTKEMCTFRDSMAKF 60 (157)
T ss_dssp TTSCEEEEECSCTTCCC------CCSCGGGGG
T ss_pred CCCeEEEEecCCCCCCccccchhhcccccccc
Confidence 5688999999 999999999888887765544
No 277
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=95.41 E-value=0.01 Score=47.66 Aligned_cols=25 Identities=8% Similarity=0.207 Sum_probs=21.3
Q ss_pred CcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 373 EPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 373 ~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
+..++.|+++|||+|+++.+.++++
T Consensus 21 ~~~v~ly~~~~Cp~C~~ak~~L~~~ 45 (103)
T 3nzn_A 21 RGKVIMYGLSTCVWCKKTKKLLTDL 45 (103)
T ss_dssp CSCEEEEECSSCHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHc
Confidence 3446679999999999999999875
No 278
>3c1r_A Glutaredoxin-1; oxidized form, oxidoreductase, cytoplasm, electron transport, redox-active center, transport; HET: MES; 2.00A {Saccharomyces cerevisiae} PDB: 3c1s_A* 2jac_A*
Probab=95.41 E-value=0.0068 Score=50.26 Aligned_cols=22 Identities=14% Similarity=0.585 Sum_probs=19.1
Q ss_pred EEEEeCCCChhhHhH-HHHHHHH
Q 015013 376 LVVLYAPWCQFCQVI-DVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m-~p~~ee~ 397 (414)
|+.|++||||+|+.+ .+.+++.
T Consensus 27 Vvvf~~~~Cp~C~~alk~~L~~~ 49 (118)
T 3c1r_A 27 IFVASKTYCPYCHAALNTLFEKL 49 (118)
T ss_dssp EEEEECSSCHHHHHHHHHHHTTS
T ss_pred EEEEEcCCCcCHHHHHHHHHHHc
Confidence 556999999999999 9988764
No 279
>1v58_A Thiol:disulfide interchange protein DSBG; reduced DSBG, redox protein, protein disulfide isomerase, thioredoxin fold; 1.70A {Escherichia coli} SCOP: c.47.1.9 d.17.3.1 PDB: 1v57_A 2h0i_A 2h0h_A 2h0g_A 2iy2_A
Probab=95.38 E-value=0.013 Score=54.67 Aligned_cols=29 Identities=14% Similarity=0.317 Sum_probs=24.7
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
..+.+|+.|+.+|||+|+.+.+.++++.+
T Consensus 96 ~ak~~v~~F~D~~Cp~C~~~~~~l~~~~~ 124 (241)
T 1v58_A 96 DAPVIVYVFADPFCPYCKQFWQQARPWVD 124 (241)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCChhHHHHHHHHHHHHh
Confidence 45678999999999999999999887544
No 280
>3uma_A Hypothetical peroxiredoxin protein; nysgrc, PSI biology, structural genomics, NEW YORK structura genomics research consortium; 2.20A {Sinorhizobium meliloti}
Probab=95.36 E-value=0.013 Score=52.43 Aligned_cols=31 Identities=10% Similarity=-0.031 Sum_probs=24.8
Q ss_pred CCc-EEEEEeCCCChhhHh-HHHHHHHHHHHHH
Q 015013 372 QEP-WLVVLYAPWCQFCQV-IDVFMQIRFQIIA 402 (414)
Q Consensus 372 ~~~-vlV~FyApWC~~Ck~-m~p~~ee~~~i~a 402 (414)
+++ ||+.||+.|||+|+. -.|.|+++++.+.
T Consensus 56 Gk~vvL~f~~a~wcp~C~~~e~p~l~~~~~~~~ 88 (184)
T 3uma_A 56 GKRVVLFAVPGAFTPTCSLNHLPGYLENRDAIL 88 (184)
T ss_dssp TSEEEEEEESCTTCHHHHHTHHHHHHHTHHHHH
T ss_pred CCCEEEEEEcCCCCCCcCHHHHHHHHHHHHHHH
Confidence 454 455566999999999 6999999888775
No 281
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=95.25 E-value=0.014 Score=54.43 Aligned_cols=32 Identities=13% Similarity=0.214 Sum_probs=29.1
Q ss_pred CCCcEEEEEeC-CCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYA-PWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~FyA-pWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.||+ .||++|....|.|.++.+.+.
T Consensus 76 ~Gk~vvL~F~~~~~cp~C~~el~~l~~l~~~~~ 108 (240)
T 3qpm_A 76 RGKYLVFFFYPLDFTFVCPTEIIAFSDRVHEFR 108 (240)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 46899999999 999999999999999988875
No 282
>2klx_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Bartonella henselae}
Probab=95.25 E-value=0.0094 Score=46.19 Aligned_cols=23 Identities=13% Similarity=0.502 Sum_probs=20.3
Q ss_pred EEEEEeCCCChhhHhHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
.++.|+++||++|+.+.+.+++.
T Consensus 7 ~v~~y~~~~C~~C~~~~~~L~~~ 29 (89)
T 2klx_A 7 EIILYTRPNCPYCKRARDLLDKK 29 (89)
T ss_dssp CEEEESCSCCTTTHHHHHHHHHH
T ss_pred eEEEEECCCChhHHHHHHHHHHc
Confidence 46779999999999999999874
No 283
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=95.19 E-value=0.063 Score=55.82 Aligned_cols=107 Identities=21% Similarity=0.177 Sum_probs=64.9
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH----HHHHHhcCCC
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV----QALVRSKGLF 187 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~----~~~~~~~G~~ 187 (414)
.++.+.+|||-||.++ .++.+...++..|.+.... .+| .++++++++++|++.+.+......+ .+.+.....+
T Consensus 242 ~~vgv~LSGGlDSS~vaala~~~~~~v~tfti~~~~-~~E-~~~A~~vA~~lg~~h~~i~i~~~~~~~~l~~~~~~~~~~ 319 (513)
T 1jgt_A 242 DTPLVVLSGGIDSSGVAACAHRAAGELDTVSMGTDT-SNE-FREARAVVDHLRTRHREITIPTTELLAQLPYAVWASESV 319 (513)
T ss_dssp CCCEEECCSSHHHHHHHHHHHHHHSSCEEEEEECSS-CCC-HHHHHHHHHHHTCEEEEEECCHHHHHTTHHHHHHHHCCC
T ss_pred CcEEEECCCcHHHHHHHHHHHHhCCCceEEEcCCCC-CCH-HHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHHHhCCC
Confidence 5799999999999875 6777665667788776542 333 5789999999999988775554322 1222211110
Q ss_pred CCCcccchhhhcchhchhHHHHh-ccCcEEEecccccCCc
Q 015013 188 SFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 226 (414)
Q Consensus 188 ~~~~~~~~~Cc~~~Kv~Pl~ral-~~~~~~itGiRrdES~ 226 (414)
+ ....| ......-+.+.. .+.+++++|.-.||-.
T Consensus 320 ---~-p~~~~-~~~~~~~l~~~a~~g~~VvltG~GaDElf 354 (513)
T 1jgt_A 320 ---D-PDIIE-YLLPLTALYRALDGPERRILTGYGADIPL 354 (513)
T ss_dssp ---C-HHHHH-HHHHHHHHHHHCCSSCCEEECCTTTHHHH
T ss_pred ---C-cccch-hHHHHHHHHHHHHcCCCEEEeCCChhhcc
Confidence 0 00001 111122233333 3568999999888864
No 284
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=95.18 E-value=0.15 Score=53.40 Aligned_cols=107 Identities=15% Similarity=0.250 Sum_probs=63.5
Q ss_pred CcEEEEechHHHHHHH-HHHHhcCC--------------CeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHH
Q 015013 113 NDIAIAFSGAEDVALI-EYAHLTGR--------------PFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEV 177 (414)
Q Consensus 113 ~~i~vafSGGKDSvlL-~L~~~~~~--------------~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~ 177 (414)
.++.+.+|||-||.++ .++.+... .+..|.+.... .+| .++++++++++|++.+.+.......
T Consensus 227 vpvgv~LSGGlDSS~iaala~~~~~~~~~~~~~~~a~~~~l~tfsig~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~ 304 (553)
T 1ct9_A 227 VPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLPG-SPD-LKAAQEVANHLGTVHHEIHFTVQEG 304 (553)
T ss_dssp SCEEEECCSSHHHHHHHHHHHHHC----------------CEEEEEESTT-CHH-HHHHHHHHHHHTCEEEEEECCHHHH
T ss_pred CceEEeCCCCccHHHHHHHHHHhhccccccccccccccCceeEEEecCCC-CcH-HHHHHHHHHHhCCCCEEEECCHHHH
Confidence 5799999999999876 67766433 26667665432 255 5789999999999887765544322
Q ss_pred ----HHHHHhcCCCCCCcccchhhhcchhchhHHHHhc--cCcEEEecccccCCc
Q 015013 178 ----QALVRSKGLFSFYEDGHQECCRVRKVRPLRRALK--GLRAWITGQRKDQSP 226 (414)
Q Consensus 178 ----~~~~~~~G~~~~~~~~~~~Cc~~~Kv~Pl~ral~--~~~~~itGiRrdES~ 226 (414)
.+.+.....+ ......| . ....-+.+..+ +.+++++|.-.||-.
T Consensus 305 ~~~l~~~i~~~~~~---~~~~~~~-~-~~~~~l~~~a~~~g~~vvLsG~GaDElf 354 (553)
T 1ct9_A 305 LDAIRDVIYHIETY---DVTTIRA-S-TPMYLMSRKIKAMGIKMVLSGEGSDEVF 354 (553)
T ss_dssp HHHHHHHHHHHCCC---CHHHHHH-H-HHHHHHHHHHHHTTCCEEECCTTHHHHH
T ss_pred HHHHHHHHHHhcCC---CcccchH-H-HHHHHHHHHHHHcCCeEEEECCCchhcc
Confidence 2233222211 1000111 1 11223344332 578999999888854
No 285
>3mng_A Peroxiredoxin-5, mitochondrial; peroxidase, PRXV, substrate analog, DTT, oxidoreductase; 1.45A {Homo sapiens} SCOP: c.47.1.10 PDB: 2vl3_A 1oc3_A 2vl2_A 2vl9_A 1urm_A 1hd2_A 1h4o_A
Probab=95.16 E-value=0.015 Score=51.59 Aligned_cols=32 Identities=3% Similarity=-0.087 Sum_probs=24.7
Q ss_pred CCCcEEEEE-eCCCChhhH-hHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVL-YAPWCQFCQ-VIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~F-yApWC~~Ck-~m~p~~ee~~~i~a 402 (414)
.++++||.| ++.||++|. .-.|.|.++++.|.
T Consensus 42 ~gk~vvL~f~pa~wcp~C~~~e~p~l~~~~~~~~ 75 (173)
T 3mng_A 42 KGKKGVLFGVPGAFTPGCSKTHLPGFVEQAEALK 75 (173)
T ss_dssp TTSEEEEEECSCTTCHHHHHTHHHHHHHTHHHHH
T ss_pred CCCcEEEEEEeCCCCCCCCHHHHHHHHHHHHHHH
Confidence 345565555 599999999 48899999888774
No 286
>2znm_A Thiol:disulfide interchange protein DSBA; thioredoxin fold, DSBA-like, oxidoreductase; 2.30A {Neisseria meningitidis serogroup B} PDB: 3dvx_A
Probab=94.95 E-value=0.0051 Score=54.67 Aligned_cols=31 Identities=10% Similarity=0.266 Sum_probs=27.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..+++|+.|+.+|||+|+.+.|.+.++.+.+
T Consensus 21 ~~~~~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 51 (195)
T 2znm_A 21 SGKIEVLEFFGYFCVHCHHFDPLLLKLGKAL 51 (195)
T ss_dssp SSSEEEEEEECTTSCCTTSSCHHHHHHHHHS
T ss_pred CCCcEEEEEECCCChhHHHHhHHHHHHHHHC
Confidence 5678999999999999999999998876654
No 287
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=94.95 E-value=0.019 Score=46.03 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=22.9
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
....-|+.|+++|||+|+++.+.|++.
T Consensus 13 ~~~~~v~vy~~~~Cp~C~~ak~~L~~~ 39 (99)
T 3qmx_A 13 AVSAKIEIYTWSTCPFCMRALALLKRK 39 (99)
T ss_dssp CCCCCEEEEECTTCHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEcCCChhHHHHHHHHHHC
Confidence 455567789999999999999999875
No 288
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=94.93 E-value=0.018 Score=43.30 Aligned_cols=22 Identities=9% Similarity=0.448 Sum_probs=19.6
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
++.|+++||++|+.+.+.+++.
T Consensus 3 i~~y~~~~C~~C~~~~~~l~~~ 24 (82)
T 1fov_A 3 VEIYTKETCPYCHRAKALLSSK 24 (82)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChhHHHHHHHHHHC
Confidence 5679999999999999999874
No 289
>1z6m_A Conserved hypothetical protein; structural genomics, MCSG,, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.30A {Enterococcus faecalis} SCOP: c.47.1.13
Probab=94.65 E-value=0.032 Score=48.54 Aligned_cols=31 Identities=6% Similarity=0.056 Sum_probs=26.8
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..+.+|+.|+.+|||+|+.+.|.+.++.+.+
T Consensus 26 ~a~v~i~~f~D~~Cp~C~~~~~~~~~~~~~~ 56 (175)
T 1z6m_A 26 NAPVKMIEFINVRCPYCRKWFEESEELLAQS 56 (175)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCcchHHHHHHHHHHHHHH
Confidence 4567899999999999999999998876665
No 290
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=94.49 E-value=0.025 Score=43.81 Aligned_cols=23 Identities=13% Similarity=0.498 Sum_probs=20.1
Q ss_pred EEEEEeCCCChhhHhHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
.++.|+++||++|+.+.+.+++.
T Consensus 7 ~v~ly~~~~C~~C~~~~~~L~~~ 29 (92)
T 2khp_A 7 DVIIYTRPGCPYCARAKALLARK 29 (92)
T ss_dssp CEEEEECTTCHHHHHHHHHHHHT
T ss_pred cEEEEECCCChhHHHHHHHHHHc
Confidence 46789999999999999999864
No 291
>4gqc_A Thiol peroxidase, peroxiredoxin Q; CXXXXC motif, fully folded, locally unfolded, peroxide, DTT, structural genomics, riken; 2.00A {Aeropyrum pernix} PDB: 2cx3_A 2cx4_A 4gqf_A
Probab=94.48 E-value=0.0019 Score=56.56 Aligned_cols=31 Identities=13% Similarity=0.360 Sum_probs=24.4
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+++++|+.|| +.||++|....|.|.++.+.+
T Consensus 32 ~Gk~vvl~f~~~~~cp~C~~e~~~l~~~~~~~ 63 (164)
T 4gqc_A 32 RGRPAVLIFFPAAFSPVCTKELCTFRDKMAQL 63 (164)
T ss_dssp TSSCEEEEECSCTTCCEECSSCEESCCCGGGG
T ss_pred CCCEEEEEEeCCCCCCCcccchhhhhhhHHHh
Confidence 6788999998 999999988767666554443
No 292
>3tjj_A Peroxiredoxin-4; thioredoxin fold, sulfenylation, endoplasmic reticulum, oxidoreductase; HET: CSO; 1.91A {Homo sapiens} PDB: 3tjk_A 3tjb_A 3tjf_A 3tjg_A 3tkq_A 3tkp_A 3tks_A 3tkr_A 3tks_C
Probab=94.35 E-value=0.02 Score=54.05 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=28.7
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++++||.|| +.||++|....|.|.++++.|.
T Consensus 90 kGK~vvL~F~~a~~cp~C~~el~~l~~l~~~~~ 122 (254)
T 3tjj_A 90 RGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEFR 122 (254)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHHTHHHHH
T ss_pred CCCeEEEEEECCCCCCchHHHHHHHHHHHHHHH
Confidence 4678999999 9999999999999999888874
No 293
>3msz_A Glutaredoxin 1; alpha-beta sandwich, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: GSH; 2.05A {Francisella tularensis subsp} PDB: 3lgc_A*
Probab=94.17 E-value=0.027 Score=42.94 Aligned_cols=24 Identities=8% Similarity=0.230 Sum_probs=20.4
Q ss_pred cEEEEEeCCCChhhHhHHHHHHHH
Q 015013 374 PWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 374 ~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
..++.|+++|||+|+++...++++
T Consensus 4 m~v~ly~~~~Cp~C~~~~~~L~~~ 27 (89)
T 3msz_A 4 MKVKIYTRNGCPYCVWAKQWFEEN 27 (89)
T ss_dssp CCEEEEECTTCHHHHHHHHHHHHT
T ss_pred eEEEEEEcCCChhHHHHHHHHHHc
Confidence 347789999999999999988864
No 294
>2rem_A Disulfide oxidoreductase; disulfide oxidoreductase, DSBA, thioredoxin fold, redox- active center; 1.90A {Xylella fastidiosa}
Probab=94.13 E-value=0.02 Score=50.65 Aligned_cols=31 Identities=16% Similarity=0.143 Sum_probs=26.3
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..+++|+.|+.+|||+|..+.|.+.++.+.+
T Consensus 24 ~a~v~i~~f~d~~Cp~C~~~~~~l~~l~~~~ 54 (193)
T 2rem_A 24 AGKIEVVEIFGYTCPHCAHFDSKLQAWGARQ 54 (193)
T ss_dssp TTCEEEEEEECTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCeEEEEEECCCChhHhhhhHHHHHHHHhc
Confidence 3567899999999999999999998766554
No 295
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=94.07 E-value=0.027 Score=43.61 Aligned_cols=22 Identities=14% Similarity=0.333 Sum_probs=19.6
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
++.|+++||++|+++.+.++++
T Consensus 14 v~ly~~~~Cp~C~~~~~~L~~~ 35 (92)
T 3ic4_A 14 VLMYGLSTCPHCKRTLEFLKRE 35 (92)
T ss_dssp SEEEECTTCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5679999999999999999875
No 296
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=93.97 E-value=0.13 Score=53.16 Aligned_cols=108 Identities=19% Similarity=0.231 Sum_probs=64.5
Q ss_pred CCcEEEEechHHHHHHH-HHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcCChHHHHH----HHHhcCC
Q 015013 112 GNDIAIAFSGAEDVALI-EYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFPDAVEVQA----LVRSKGL 186 (414)
Q Consensus 112 ~~~i~vafSGGKDSvlL-~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P~~~~~~~----~~~~~G~ 186 (414)
+.++++.+|||-||.++ .++.+...++..+.++... .+| .++++++++++|++.+++......+.+ .+.....
T Consensus 238 d~~v~v~LSGGlDSs~vaala~~~~~~~~~~t~~~~~-~~E-~~~A~~vA~~lg~~h~~i~~~~~~~~~~l~~~~~~~~~ 315 (503)
T 1q15_A 238 FDTVGIPLSGGLDSSLVTALASRHFKKLNTYSIGTEL-SNE-FEFSQQVADALGTHHQMKILSETEVINGIIESIYYNEI 315 (503)
T ss_dssp CSEEEEECCSSHHHHHHHHHHTTTCSEEEEEEEEETT-BCC-HHHHHHHHHHHTCEEEEEEECHHHHHHHHHHHHHHHCC
T ss_pred CCcEEEECCCCHHHHHHHHHHHHhCCCcEEEEEeCCC-ccH-HHHHHHHHHHhCCceEEEECCHHHHHHHHHHHHHHhcC
Confidence 35799999999999876 6777766667777766431 233 578999999999998877555433222 1111111
Q ss_pred CCCCcccchhhhcchhchhHHHHh-ccCcEEEecccccCCc
Q 015013 187 FSFYEDGHQECCRVRKVRPLRRAL-KGLRAWITGQRKDQSP 226 (414)
Q Consensus 187 ~~~~~~~~~~Cc~~~Kv~Pl~ral-~~~~~~itGiRrdES~ 226 (414)
+. ....+ ......-+.+.. .+.+++++|.-.||-.
T Consensus 316 ~~----p~~~~-~~~~~~~l~~~a~~~~~VvltG~GaDElf 351 (503)
T 1q15_A 316 FD----GLSAE-IQSGLFNVYRQAQGQVSCMLTGYGSDLLF 351 (503)
T ss_dssp CC----HHHHH-HHHHHHHHHHHHBTTBSEEECCTTHHHHH
T ss_pred CC----cccch-hHHHHHHHHHHHHCCCCEEEeCCChhhhc
Confidence 00 00001 111122233322 3668999999988864
No 297
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=93.85 E-value=0.033 Score=45.62 Aligned_cols=22 Identities=9% Similarity=0.354 Sum_probs=18.9
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
++.|+++|||+|+++.+.++++
T Consensus 19 v~vy~~~~Cp~C~~ak~~L~~~ 40 (114)
T 3h8q_A 19 VVIFSKSYCPHSTRVKELFSSL 40 (114)
T ss_dssp EEEEECTTCHHHHHHHHHHHHT
T ss_pred EEEEEcCCCCcHHHHHHHHHHc
Confidence 3449999999999999999874
No 298
>3a2v_A Probable peroxiredoxin; thioredoxin peroxidase, hydrogen peroxide, antioxidant, oxidoreductase, redox-active center; 1.65A {Aeropyrum pernix} PDB: 1x0r_A 2zct_A 2nvl_A 2e2g_A 2cv4_A* 3a5w_A 2e2m_A 3a2x_A 3a2w_A
Probab=93.41 E-value=0.038 Score=52.03 Aligned_cols=33 Identities=15% Similarity=0.086 Sum_probs=27.3
Q ss_pred CCC-cEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQE-PWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~-~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++ .||+.|||+||++|....|.|.++++.|..
T Consensus 32 ~GK~vVL~~fpa~~CpvC~tEl~~l~~l~~ef~~ 65 (249)
T 3a2v_A 32 QGKWFVLFSHPADFTPVCTTEFVSFARRYEDFQR 65 (249)
T ss_dssp TTCEEEEECCSCTTCHHHHHHHHHHHHTHHHHHH
T ss_pred CCCEEEEEEEcCCCCcChHHHHHHHHHHHHHHHh
Confidence 345 456788999999999999999998887753
No 299
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=93.41 E-value=0.074 Score=48.91 Aligned_cols=29 Identities=10% Similarity=-0.138 Sum_probs=25.2
Q ss_pred cEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 374 PWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 374 ~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.||+.|++.||++|....|.|.++.+.+.
T Consensus 34 vvL~~~~a~~cp~C~~el~~l~~l~~~f~ 62 (224)
T 1prx_A 34 GILFSHPRDFTPVCTTELGRAAKLAPEFA 62 (224)
T ss_dssp EEEEEESCSSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCCCcHHHHHHHHHHHHHHH
Confidence 56667789999999999999999888775
No 300
>2v2g_A Peroxiredoxin 6; oxidoreductase, antioxidant enzymes; 1.60A {Arenicola marina} PDB: 2v32_A 2v41_A
Probab=93.30 E-value=0.059 Score=50.08 Aligned_cols=32 Identities=0% Similarity=-0.358 Sum_probs=27.5
Q ss_pred CCcEEEEEe-CCCChhhHhHHHHHHHHHHHHHH
Q 015013 372 QEPWLVVLY-APWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 372 ~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
++.+||.|| |.||+.|....+.|.++.+.+..
T Consensus 29 k~~vvL~f~pa~~cpvC~~el~~l~~l~~ef~~ 61 (233)
T 2v2g_A 29 NSWGVLFSHPRDFTPVSTTELGRVIQLEGDFKK 61 (233)
T ss_dssp SSEEEEEECSCSSCHHHHHHHHHHHHTHHHHHH
T ss_pred CCeEEEEEECCCCCCCcHHHHHHHHHHHHHHHH
Confidence 348889998 99999999999999998887753
No 301
>3ctg_A Glutaredoxin-2; reduced form, electron transport, mitochondrion, redox-activ transit peptide, transport, oxidoreductase; 1.50A {Saccharomyces cerevisiae} PDB: 3ctf_A 3d4m_A 3d5j_A*
Probab=93.29 E-value=0.04 Score=46.43 Aligned_cols=22 Identities=18% Similarity=0.554 Sum_probs=19.3
Q ss_pred EEEEeCCCChhhHhH-HHHHHHH
Q 015013 376 LVVLYAPWCQFCQVI-DVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m-~p~~ee~ 397 (414)
|+.|+.+|||+|+++ .+.+++.
T Consensus 39 Vvvy~~~~Cp~C~~a~k~~L~~~ 61 (129)
T 3ctg_A 39 VFVAAKTYCPYCKATLSTLFQEL 61 (129)
T ss_dssp EEEEECTTCHHHHHHHHHHHTTS
T ss_pred EEEEECCCCCchHHHHHHHHHhc
Confidence 678999999999999 8888764
No 302
>3l9s_A Thiol:disulfide interchange protein; thioredoxin-fold, DSBA, thiol-disulfide oxidoreductase, DISU bond, redox-active center; 1.58A {Salmonella enterica subsp} SCOP: c.47.1.13 PDB: 1a23_A 1a24_A 1a2j_A 1a2l_A 1a2m_A 1dsb_A 1fvk_A 3dks_A 1bq7_A 1fvj_A 1acv_A 1u3a_A* 1ti1_A* 2hi7_A* 2leg_A* 2zup_A* 3e9j_B* 1ac1_A 2b6m_A 2b3s_A
Probab=93.11 E-value=0.03 Score=50.23 Aligned_cols=31 Identities=13% Similarity=0.401 Sum_probs=26.0
Q ss_pred CCcEEEEEeCCCChhhHhHHHHH---HHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQVIDVFM---QIRFQIIA 402 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~m~p~~---ee~~~i~a 402 (414)
.+++||+|+..|||+|+.+.|.+ +++.+.+.
T Consensus 21 ~~~~vvef~d~~Cp~C~~~~~~l~~~~~l~~~~~ 54 (191)
T 3l9s_A 21 GEPQVLEFFSFYCPHCYQFEEVLHVSDNVKKKLP 54 (191)
T ss_dssp SSSCEEEEECTTCHHHHHHHHTSCHHHHHHHHSC
T ss_pred CCCeEEEEECCCChhHHHhChhccchHHHHHhCC
Confidence 47899999999999999999986 56666553
No 303
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=92.46 E-value=0.11 Score=41.96 Aligned_cols=33 Identities=15% Similarity=0.354 Sum_probs=23.4
Q ss_pred cchHHHHhhhcCCCcEEEEEeC-----CCChhhHhHHHHHHHH
Q 015013 360 TGMENLARLDHRQEPWLVVLYA-----PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 360 ~~~e~~v~~~~~~~~vlV~FyA-----pWC~~Ck~m~p~~ee~ 397 (414)
+.++.++. .. .| +.|+. +||++|+++.+.|++.
T Consensus 6 ~~~~~~i~---~~-~v-vvy~~g~~~~~~Cp~C~~ak~~L~~~ 43 (109)
T 1wik_A 6 SGLKVLTN---KA-SV-MLFMKGNKQEAKCGFSKQILEILNST 43 (109)
T ss_dssp CCHHHHHT---TS-SE-EEEESSTTTCCCSSTHHHHHHHHHHT
T ss_pred HHHHHHhc---cC-CE-EEEEecCCCCCCCchHHHHHHHHHHc
Confidence 45666553 33 34 45777 9999999999999864
No 304
>1xcc_A 1-Cys peroxiredoxin; unknown function, structural genomics, structural genomics consortium, SGC; 2.30A {Plasmodium yoelii} SCOP: c.47.1.10 PDB: 3tb2_A
Probab=92.09 E-value=0.074 Score=48.78 Aligned_cols=29 Identities=7% Similarity=-0.052 Sum_probs=24.4
Q ss_pred cEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 374 PWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 374 ~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.||+.|+|+||+.|....+.|.++.+.+.
T Consensus 34 vvL~f~~a~~cp~C~~el~~l~~l~~~f~ 62 (220)
T 1xcc_A 34 AILFSHPNDFTPVCTTELAELGKMHEDFL 62 (220)
T ss_dssp EEEECCSCTTCHHHHHHHHHHHHTHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHHHHHHHHHHH
Confidence 55556689999999999999999888775
No 305
>3l4n_A Monothiol glutaredoxin-6; C-terminal domain of GRX6, oxidoreductase; HET: GSH; 1.50A {Saccharomyces cerevisiae}
Probab=91.66 E-value=0.16 Score=42.76 Aligned_cols=32 Identities=3% Similarity=0.219 Sum_probs=24.4
Q ss_pred chHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 361 GMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 361 ~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
++++++. +++ |+.|..+|||+|++....|++.
T Consensus 6 ~~~~ii~---~~~--Vvvysk~~Cp~C~~ak~lL~~~ 37 (127)
T 3l4n_A 6 EYSLILD---LSP--IIIFSKSTCSYSKGMKELLENE 37 (127)
T ss_dssp HHHHHHT---SCS--EEEEECTTCHHHHHHHHHHHHH
T ss_pred HHHHHHc---cCC--EEEEEcCCCccHHHHHHHHHHh
Confidence 4555443 443 6789999999999999999874
No 306
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=90.35 E-value=0.16 Score=40.24 Aligned_cols=23 Identities=17% Similarity=0.632 Sum_probs=19.8
Q ss_pred EEEEEeCCCChhhHhHHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 375 vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
-|+.|..+|||+|++.+..|++.
T Consensus 5 ~I~vYs~~~Cp~C~~aK~~L~~~ 27 (92)
T 2lqo_A 5 ALTIYTTSWCGYCLRLKTALTAN 27 (92)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHT
T ss_pred cEEEEcCCCCHhHHHHHHHHHhc
Confidence 46789999999999999988853
No 307
>3gv1_A Disulfide interchange protein; neisseria gonorrhoeae (strain 700825 / FA 1090), DSBC, structural genomics, unknown funct 2; 2.00A {Neisseria gonorrhoeae}
Probab=90.23 E-value=0.16 Score=43.76 Aligned_cols=27 Identities=19% Similarity=0.379 Sum_probs=24.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
..+.+|+.|+-++||+|+++.+.++++
T Consensus 13 ~a~~~vv~f~D~~Cp~C~~~~~~l~~l 39 (147)
T 3gv1_A 13 NGKLKVAVFSDPDCPFCKRLEHEFEKM 39 (147)
T ss_dssp TCCEEEEEEECTTCHHHHHHHHHHTTC
T ss_pred CCCEEEEEEECCCChhHHHHHHHHhhc
Confidence 567899999999999999999998764
No 308
>4dvc_A Thiol:disulfide interchange protein DSBA; pilus assembly, oxidoreductase, thioredoxin fold, D disulfide bond, DSBB; HET: DMS; 1.20A {Vibrio cholerae} PDB: 2ijy_A 1bed_A
Probab=90.15 E-value=0.29 Score=42.27 Aligned_cols=33 Identities=12% Similarity=0.354 Sum_probs=28.2
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIAL 403 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a~ 403 (414)
.++++||+|+.-.||+|+.+.|.+.++.+.+..
T Consensus 20 ~~~~~vvEf~dy~Cp~C~~~~~~~~~l~~~~~~ 52 (184)
T 4dvc_A 20 SSSPVVSEFFSFYCPHCNTFEPIIAQLKQQLPE 52 (184)
T ss_dssp CSSCEEEEEECTTCHHHHHHHHHHHHHHHTSCT
T ss_pred CCCCEEEEEECCCCHhHHHHhHHHHHHHhhcCC
Confidence 457899999999999999999999988766543
No 309
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=90.11 E-value=0.61 Score=48.91 Aligned_cols=66 Identities=20% Similarity=0.231 Sum_probs=51.1
Q ss_pred HHHHHHcC-CcEEEEechHHHHHHH-HHHHh-cC-CCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEE
Q 015013 105 DRALEKFG-NDIAIAFSGAEDVALI-EYAHL-TG-RPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYM 170 (414)
Q Consensus 105 ~~a~~~~~-~~i~vafSGGKDSvlL-~L~~~-~~-~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~ 170 (414)
+..+.+.+ ..++|+.|||-||+++ .|+.+ .+ .+|..+++-+-.--.+|++-...+++.+|+....+
T Consensus 292 ~dy~~k~g~~~~vlglSGGiDSal~~~la~~alg~~~v~~v~mp~~~ts~~t~~~a~~la~~lg~~~~~i 361 (565)
T 4f4h_A 292 RDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRYTAGISTTDAADMARRVGVRYDEI 361 (565)
T ss_dssp HHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCTTCCHHHHHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHcCCCcEEEecCCCccHHHHHHHHHHHhCCccEEEEeccccccccchHHHHHHHHHHhCCceeee
Confidence 33344444 5699999999999875 55544 33 45788888888889999999999999999988765
No 310
>4f82_A Thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.85A {Burkholderia cenocepacia}
Probab=88.05 E-value=0.58 Score=41.60 Aligned_cols=31 Identities=6% Similarity=-0.050 Sum_probs=25.6
Q ss_pred CCcEEEEEeCCCChhhHh-HHHHHHHHHHHHH
Q 015013 372 QEPWLVVLYAPWCQFCQV-IDVFMQIRFQIIA 402 (414)
Q Consensus 372 ~~~vlV~FyApWC~~Ck~-m~p~~ee~~~i~a 402 (414)
+..||+.|++.|||.|.. -.|.|.+.++.|.
T Consensus 48 k~vVL~fyP~~~tp~Ct~~El~~f~~~~~ef~ 79 (176)
T 4f82_A 48 KRVVIFGLPGAFTPTCSAQHVPGYVEHAEQLR 79 (176)
T ss_dssp CEEEEEEESCTTCHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEEcCCCCCCCCHHHHHHHHHHHHHHH
Confidence 345666778999999999 8999999888774
No 311
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=87.32 E-value=0.59 Score=42.48 Aligned_cols=48 Identities=8% Similarity=-0.061 Sum_probs=37.6
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.|..++.++++.+.. ..-..+++.|+.+||++|+.+.+.|+++++.+
T Consensus 113 plv~e~t~~n~~~~~~--~~~~~~~l~f~~~~~~~~~~~~~~~~~vAk~~ 160 (227)
T 4f9z_D 113 HMVTEYNPVTVIGLFN--SVIQIHLLLIMNKASPEYEENMHRYQKAAKLF 160 (227)
T ss_dssp CSEEECCHHHHHHHHH--SSCCEEEEEEECTTSTTHHHHHHHHHHHHHHT
T ss_pred CceeecCcccHHHHhc--cCCceEEEEEEcCCcchHHHHHHHHHHHHHHh
Confidence 5688999999988765 33345556777999999999999999876654
No 312
>3keb_A Probable thiol peroxidase; structural genomics, APC40679, PSI-2, Pro structure initiative; HET: MSE; 1.80A {Chromobacterium violaceum}
Probab=86.52 E-value=0.29 Score=45.36 Aligned_cols=27 Identities=11% Similarity=-0.128 Sum_probs=22.2
Q ss_pred CCCcEEEEEeCCC-ChhhH-----hHHHHHHHH
Q 015013 371 RQEPWLVVLYAPW-CQFCQ-----VIDVFMQIR 397 (414)
Q Consensus 371 ~~~~vlV~FyApW-C~~Ck-----~m~p~~ee~ 397 (414)
.++++||.||+.| ||+|. ...+.|.++
T Consensus 47 ~Gk~vVL~F~ps~~cp~C~~~~~~~El~~~~~~ 79 (224)
T 3keb_A 47 SHTPKLIVTLLSVDEDEHAGLLLLRETRRFLDS 79 (224)
T ss_dssp TTCCEEEEECSCTTCSTTTSHHHHHHHHHHHTT
T ss_pred CCCcEEEEEEeCCCCCCCCCCccHHHHHHHHHH
Confidence 4678999999998 99999 767777664
No 313
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=82.73 E-value=0.84 Score=37.70 Aligned_cols=16 Identities=19% Similarity=0.378 Sum_probs=14.2
Q ss_pred CCChhhHhHHHHHHHH
Q 015013 382 PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 382 pWC~~Ck~m~p~~ee~ 397 (414)
||||+|+.....|++.
T Consensus 29 p~Cp~C~~ak~lL~~~ 44 (121)
T 3gx8_A 29 PKCGFSRATIGLLGNQ 44 (121)
T ss_dssp BCTTHHHHHHHHHHHH
T ss_pred CCCccHHHHHHHHHHc
Confidence 6999999999998874
No 314
>2l4c_A Endoplasmic reticulum resident protein 27; ERP27, PDI, B domain, peptide binding; NMR {Homo sapiens}
Probab=82.50 E-value=1.3 Score=36.81 Aligned_cols=38 Identities=5% Similarity=-0.045 Sum_probs=29.6
Q ss_pred CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 358 NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 358 ~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++++.++. .+.++||-|+++||++| .+.|.++++.+
T Consensus 28 s~~e~e~fi~---~~~v~VVGfF~~~~~~~---~~~F~~~A~~~ 65 (124)
T 2l4c_A 28 DVPAAMEFIA---ATEVAVIGFFQDLEIPA---VPILHSMVQKF 65 (124)
T ss_dssp SHHHHHHHHH---TSSEEEEEECSCTTSTH---HHHHHHHHHHC
T ss_pred CHHHHHHHHh---cCCCEEEEEECCCCChh---HHHHHHHHHhC
Confidence 4556777765 67889999999999999 56777777664
No 315
>4f9z_D Endoplasmic reticulum resident protein 27; thioredoxin fold, ER foldase, ERP57, binding protein; HET: PE3 PE4; 2.20A {Homo sapiens} PDB: 2l4c_A
Probab=81.89 E-value=0.72 Score=41.88 Aligned_cols=44 Identities=9% Similarity=-0.019 Sum_probs=34.5
Q ss_pred CCeEec-CccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTL-NRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l-~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.++.+ +.++++.++. .+..+||-|+++|| ..+.+.|.++|+.+
T Consensus 9 ~~~~~l~s~~~~~~~l~---~~~v~vVgff~~~~---~~~~~~f~~~A~~l 53 (227)
T 4f9z_D 9 QEPTWLTDVPAAMEFIA---ATEVAVIGFFQDLE---IPAVPILHSMVQKF 53 (227)
T ss_dssp CCCEECCSHHHHHHHHH---TSSEEEEEECSCSC---STHHHHHHHHTTTC
T ss_pred CCCeeeCCHHHHHHHHh---cCCeEEEEEecCCC---chhHHHHHHHHHhC
Confidence 345566 5688888775 78899999999994 67889999987765
No 316
>3sbc_A Peroxiredoxin TSA1; alpha-beta fold, peroxidase, cytosol, oxidoreductase; 2.80A {Saccharomyces cerevisiae}
Probab=81.62 E-value=1.2 Score=40.78 Aligned_cols=32 Identities=0% Similarity=-0.073 Sum_probs=28.2
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++.+|+.|| +.||+.|..-.+.|+++++.|.
T Consensus 51 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~~f~ 83 (216)
T 3sbc_A 51 KGKYVVLAFIPLAFTFVSPTEIIAFSEAAKKFE 83 (216)
T ss_dssp TTSEEEEEECSCTTSSHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEcCCCCCcCchhhhHHHHhHHhhc
Confidence 4678999999 9999999999999999887774
No 317
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=81.37 E-value=1.1 Score=36.04 Aligned_cols=16 Identities=19% Similarity=0.499 Sum_probs=13.9
Q ss_pred CCChhhHhHHHHHHHH
Q 015013 382 PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 382 pWC~~Ck~m~p~~ee~ 397 (414)
||||+|++....|++.
T Consensus 31 p~Cp~C~~ak~~L~~~ 46 (109)
T 3ipz_A 31 PMCGFSNTVVQILKNL 46 (109)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CCChhHHHHHHHHHHc
Confidence 6999999999888863
No 318
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=80.00 E-value=1.4 Score=33.52 Aligned_cols=22 Identities=14% Similarity=0.282 Sum_probs=18.6
Q ss_pred EEEEeCC----CChhhHhHHHHHHHH
Q 015013 376 LVVLYAP----WCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyAp----WC~~Ck~m~p~~ee~ 397 (414)
++.|+.+ |||+|++....|++.
T Consensus 2 v~iY~~~~~~~~Cp~C~~ak~~L~~~ 27 (87)
T 1aba_A 2 FKVYGYDSNIHKCGPCDNAKRLLTVK 27 (87)
T ss_dssp EEEEECCTTTSCCHHHHHHHHHHHHT
T ss_pred EEEEEeCCCCCcCccHHHHHHHHHHc
Confidence 4568899 999999999888763
No 319
>1nm3_A Protein HI0572; hybrid, peroxiredoxin, glutaredoxin, electron transport; 2.80A {Haemophilus influenzae} SCOP: c.47.1.1 c.47.1.10
Probab=79.69 E-value=2 Score=39.07 Aligned_cols=25 Identities=16% Similarity=0.495 Sum_probs=21.0
Q ss_pred CcEEEEEeCCCChhhHhHHHHHHHH
Q 015013 373 EPWLVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 373 ~~vlV~FyApWC~~Ck~m~p~~ee~ 397 (414)
...++.|..+||++|+.....+++.
T Consensus 169 ~~~i~ly~~~~Cp~C~~a~~~L~~~ 193 (241)
T 1nm3_A 169 QESISIFTKPGCPFCAKAKQLLHDK 193 (241)
T ss_dssp CCCEEEEECSSCHHHHHHHHHHHHH
T ss_pred cceEEEEECCCChHHHHHHHHHHHc
Confidence 3457778999999999999998874
No 320
>3tdg_A DSBG, putative uncharacterized protein; thioredoxin fold, reductase, oxidoreductase; HET: P6G; 2.10A {Helicobacter pylori}
Probab=79.41 E-value=1.4 Score=41.91 Aligned_cols=29 Identities=17% Similarity=0.376 Sum_probs=25.0
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQIRFQ 399 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~ee~~~ 399 (414)
..+.+|+.|+=|.||+|+++.+.+++..+
T Consensus 146 ~gk~~I~vFtDp~CPYCkkl~~~l~~~l~ 174 (273)
T 3tdg_A 146 NKDKILYIVSDPMCPHCQKELTKLRDHLK 174 (273)
T ss_dssp GTTCEEEEEECTTCHHHHHHHHTHHHHHH
T ss_pred CCCeEEEEEECcCChhHHHHHHHHHHHhh
Confidence 46789999999999999999999886544
No 321
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=76.45 E-value=1.7 Score=35.18 Aligned_cols=25 Identities=16% Similarity=0.497 Sum_probs=18.9
Q ss_pred CCcEEEEEeC-----CCChhhHhHHHHHHHH
Q 015013 372 QEPWLVVLYA-----PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 372 ~~~vlV~FyA-----pWC~~Ck~m~p~~ee~ 397 (414)
..+|+ .|.. +|||+|+.....|++.
T Consensus 15 ~~~Vv-lf~kg~~~~~~Cp~C~~ak~~L~~~ 44 (111)
T 3zyw_A 15 AAPCM-LFMKGTPQEPRCGFSKQMVEILHKH 44 (111)
T ss_dssp SSSEE-EEESBCSSSBSSHHHHHHHHHHHHT
T ss_pred cCCEE-EEEecCCCCCcchhHHHHHHHHHHc
Confidence 34444 5677 9999999999888863
No 322
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=75.98 E-value=1.3 Score=37.55 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=17.7
Q ss_pred cEEEEEeC----CCChhhHhHHHHHHHH
Q 015013 374 PWLVVLYA----PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 374 ~vlV~FyA----pWC~~Ck~m~p~~ee~ 397 (414)
.|+|..++ ||||+|++....|+++
T Consensus 36 ~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~ 63 (135)
T 2wci_A 36 PILLYMKGSPKLPSCGFSAQAVQALAAC 63 (135)
T ss_dssp SEEEEESBCSSSBSSHHHHHHHHHHHTT
T ss_pred CEEEEEEecCCCCCCccHHHHHHHHHHc
Confidence 45554443 9999999999988753
No 323
>3gha_A Disulfide bond formation protein D; BDBD, DSBA-like, TRX-like, oxidoreductase, competence, redox-active center; 1.40A {Bacillus subtilis} PDB: 3eu4_A 3gh9_A 3eu3_A
Probab=74.29 E-value=2.6 Score=37.60 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=21.6
Q ss_pred CCCcEEEEEeCCCChhhHhHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVFMQ 395 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~~e 395 (414)
..+.+||.|+-..||+|+.+.+.+.
T Consensus 28 ~a~vtvvef~D~~CP~C~~~~~~~~ 52 (202)
T 3gha_A 28 DAPVTVVEFGDYKCPSCKVFNSDIF 52 (202)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTH
T ss_pred CCCEEEEEEECCCChhHHHHHHHhh
Confidence 4577899999999999999988753
No 324
>3f4s_A Alpha-DSBA1, putative uncharacterized protein; thioredoxin-fold, oxidoreductase; HET: PGE; 1.55A {Wolbachia pipientis} PDB: 3f4r_A* 3f4t_A*
Probab=72.15 E-value=3.5 Score=37.69 Aligned_cols=31 Identities=6% Similarity=0.086 Sum_probs=24.3
Q ss_pred CCCcEEEEEeCCCChhhHhHHHH-HHHHHHHH
Q 015013 371 RQEPWLVVLYAPWCQFCQVIDVF-MQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~FyApWC~~Ck~m~p~-~ee~~~i~ 401 (414)
..+.+|+.|+-..||+|+.+.+. +.++.+.+
T Consensus 38 ~A~vtIvef~Dy~CP~C~~~~~~~~~~l~~~~ 69 (226)
T 3f4s_A 38 KAPILMIEYASLTCYHCSLFHRNVFPKIKEKY 69 (226)
T ss_dssp TCSEEEEEEECTTCHHHHHHHHHTHHHHHHHH
T ss_pred CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHc
Confidence 45678999999999999999985 45554444
No 325
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=72.06 E-value=2.2 Score=35.06 Aligned_cols=16 Identities=19% Similarity=0.640 Sum_probs=13.9
Q ss_pred CCChhhHhHHHHHHHH
Q 015013 382 PWCQFCQVIDVFMQIR 397 (414)
Q Consensus 382 pWC~~Ck~m~p~~ee~ 397 (414)
||||+|+.....|++.
T Consensus 33 p~Cp~C~~ak~lL~~~ 48 (118)
T 2wem_A 33 PQCGFSNAVVQILRLH 48 (118)
T ss_dssp BSSHHHHHHHHHHHHT
T ss_pred CccHHHHHHHHHHHHc
Confidence 6999999999988863
No 326
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=69.31 E-value=2.9 Score=32.19 Aligned_cols=21 Identities=10% Similarity=-0.077 Sum_probs=17.1
Q ss_pred EEEEeCCCChhh------HhHHHHHHH
Q 015013 376 LVVLYAPWCQFC------QVIDVFMQI 396 (414)
Q Consensus 376 lV~FyApWC~~C------k~m~p~~ee 396 (414)
|+.|+.+|||.| +.....|++
T Consensus 4 v~ly~~~~C~~c~~~~~~~~ak~~L~~ 30 (93)
T 1t1v_A 4 LRVYSTSVTGSREIKSQQSEVTRILDG 30 (93)
T ss_dssp EEEEECSSCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCCchhhHHHHHHHHHHHH
Confidence 567899999999 777777764
No 327
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=69.04 E-value=2.9 Score=33.67 Aligned_cols=22 Identities=18% Similarity=0.218 Sum_probs=17.9
Q ss_pred EEEEEeCCCChhhH------hHHHHHHH
Q 015013 375 WLVVLYAPWCQFCQ------VIDVFMQI 396 (414)
Q Consensus 375 vlV~FyApWC~~Ck------~m~p~~ee 396 (414)
-|+.|+.+||++|+ +....|++
T Consensus 9 ~V~vy~~~~C~~C~~~~~~~~ak~~L~~ 36 (111)
T 2ct6_A 9 VIRVFIASSSGFVAIKKKQQDVVRFLEA 36 (111)
T ss_dssp CEEEEECSSCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCcccchhHHHHHHHHHH
Confidence 46778999999999 67777765
No 328
>1sji_A Calsequestrin 2, calsequestrin, cardiac muscle isoform; glycoprotein, calcium-binding, muscle protein, metal binding protein; 2.40A {Canis lupus familiaris} PDB: 2vaf_A
Probab=65.91 E-value=10 Score=36.43 Aligned_cols=48 Identities=8% Similarity=-0.161 Sum_probs=37.2
Q ss_pred CCeEecCccchHHHHhhhcC-CCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHR-QEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~-~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
+.|..++.+++..+.. +. .+..++.|+.+||+.|..+.+.|+++++.+
T Consensus 226 p~v~elt~~~~~~~~~--~~~~~~~~l~f~~~~~~~~~~~~~~~~~vA~~~ 274 (350)
T 1sji_A 226 PTLRRLRPEDMFETWE--DDLNGIHIVAFAERSDPDGYEFLEILKQVARDN 274 (350)
T ss_dssp CSEEECCTTTHHHHHH--SCSSSEEEEEECCTTSHHHHHHHHHHHHHHHHG
T ss_pred cchhhcChhhHHHHhc--CCCCCcEEEEEEcCCCccHHHHHHHHHHHHHHh
Confidence 5788999999988754 22 244556699999999999999999876665
No 329
>3tue_A Tryparedoxin peroxidase; thioredoxin fold, peroxiredoxin, oxidoreductase; 3.00A {Leishmania major} PDB: 1e2y_A
Probab=61.93 E-value=3.6 Score=37.77 Aligned_cols=32 Identities=6% Similarity=0.110 Sum_probs=27.1
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++.+|+.|| +.||+.|..-...|.++++.|.
T Consensus 55 ~GK~vVL~FyP~d~TpvCt~E~~~f~~~~~eF~ 87 (219)
T 3tue_A 55 KGKWVVLFFYPLDFTFVCPTEVIAFSDSVSRFN 87 (219)
T ss_dssp TTSEEEEEECSCTTCSSCCHHHHHHHTTHHHHH
T ss_pred CCCEEEEEEecccCCCCCchhHhhHHHHHhhhc
Confidence 4578999999 9999999998888888776663
No 330
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=61.92 E-value=5.9 Score=32.01 Aligned_cols=21 Identities=10% Similarity=0.142 Sum_probs=17.5
Q ss_pred EEEEeCCCChhhHhHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQI 396 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee 396 (414)
++.|+.|+|+.|+.....+++
T Consensus 2 i~iY~~~~C~~C~kak~~L~~ 22 (114)
T 1rw1_A 2 YVLYGIKACDTMKKARTWLDE 22 (114)
T ss_dssp EEEEECSSCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456889999999998887765
No 331
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=60.40 E-value=6.8 Score=31.92 Aligned_cols=22 Identities=5% Similarity=0.182 Sum_probs=18.3
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
+..|+.|+|+.|++....+++.
T Consensus 7 i~iY~~~~C~~C~ka~~~L~~~ 28 (120)
T 2kok_A 7 VTIYGIKNCDTMKKARIWLEDH 28 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHc
Confidence 5568899999999988888764
No 332
>2ec4_A FAS-associated factor 1; UAS domain, protein FAF1, HFAF1, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.14 E-value=7.3 Score=34.36 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=25.1
Q ss_pred ccchHHHHh-h----hcCCCcEEEEEeCCCChhhHhHH
Q 015013 359 RTGMENLAR-L----DHRQEPWLVVLYAPWCQFCQVID 391 (414)
Q Consensus 359 ~~~~e~~v~-~----~~~~~~vlV~FyApWC~~Ck~m~ 391 (414)
...+++.+. . ++..|+++|.+++|||..|..|.
T Consensus 37 ~gs~~~Al~~A~~~~k~e~K~LlVyLhs~~~~~~~~f~ 74 (178)
T 2ec4_A 37 IGSLEAAFQEAFYVKARDRKLLAIYLHHDESVLTNVFC 74 (178)
T ss_dssp CSCHHHHHHTTTSSCTTTCCEEEEEEECSSCSHHHHHH
T ss_pred eCCHHHHHHHHHhhhhhhCcEEEEEEeCCCCccHHHHH
Confidence 445544443 3 46789999999999999999875
No 333
>2axo_A Hypothetical protein ATU2684; alpha beta protein., structural genomics, PSI, protein struc initiative; 1.80A {Agrobacterium tumefaciens str} SCOP: c.47.1.19
Probab=57.91 E-value=8.6 Score=36.39 Aligned_cols=28 Identities=14% Similarity=0.186 Sum_probs=23.6
Q ss_pred CcEEEEEeCCCChhhHhHHHHHHHHHHH
Q 015013 373 EPWLVVLYAPWCQFCQVIDVFMQIRFQI 400 (414)
Q Consensus 373 ~~vlV~FyApWC~~Ck~m~p~~ee~~~i 400 (414)
...|..|..++||+|...+..++++...
T Consensus 43 ~~~VelyTs~gCp~C~~Ak~lL~~~~~~ 70 (270)
T 2axo_A 43 KGVVELFTSQGCASCPPADEALRKMIQK 70 (270)
T ss_dssp CCEEEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred CcEEEEEeCCCCCChHHHHHHHHHhhcc
Confidence 3577789999999999999999887554
No 334
>1xiy_A Peroxiredoxin, pfaop; alpha-aneurysm, thioredoxin fold, peroxiredoxin fold, oxidoreductase; 1.80A {Plasmodium falciparum} SCOP: c.47.1.10
Probab=56.52 E-value=9.1 Score=33.75 Aligned_cols=31 Identities=6% Similarity=0.166 Sum_probs=23.9
Q ss_pred CCCcEEEEEe-CCCChhhH-hHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQ-VIDVFMQIRFQII 401 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck-~m~p~~ee~~~i~ 401 (414)
.++.+|+.|| +.|||.|. .-.+.|.+.++.|
T Consensus 42 ~gk~vVL~fyP~~fTp~Ct~~e~~~f~~~~~~f 74 (182)
T 1xiy_A 42 NNKKILLISLPGAFTPTCSTKMIPGYEEEYDYF 74 (182)
T ss_dssp TTCEEEEEECSCTTCHHHHHTHHHHHHHTHHHH
T ss_pred CCCcEEEEEeCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3456767666 78999999 7788888877666
No 335
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=52.82 E-value=10 Score=30.95 Aligned_cols=22 Identities=14% Similarity=0.535 Sum_probs=18.1
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
+..|+.|+|+.|+.....+++.
T Consensus 2 i~iY~~~~C~~c~ka~~~L~~~ 23 (120)
T 3l78_A 2 VTLFLSPSCTSCRKARAWLNRH 23 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHT
T ss_pred EEEEeCCCCHHHHHHHHHHHHc
Confidence 4568899999999988888753
No 336
>4eo3_A Bacterioferritin comigratory protein/NADH dehydro; thioredoxin-fold, alpha-beta-aplha sandwich fold, antioxidan oxidoreductase, FMN binding; HET: FMN; 1.65A {Thermotoga maritima}
Probab=50.13 E-value=11 Score=36.21 Aligned_cols=26 Identities=4% Similarity=-0.151 Sum_probs=21.2
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQI 396 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee 396 (414)
.+++||+.|| +.|||.|..-.+.|.+
T Consensus 23 ~Gk~vvl~F~p~~~tp~C~~e~~~~~~ 49 (322)
T 4eo3_A 23 YGKYTILFFFPKAGTSGSTREAVEFSR 49 (322)
T ss_dssp TTSEEEEEECSSTTSHHHHHHHHHHHH
T ss_pred CCCeEEEEEECCCCCCCCHHHHHHHHH
Confidence 5688999999 6799999877777753
No 337
>2jad_A Yellow fluorescent protein glutaredoxin fusion protein; electron transport, redox- active center, yeast, GRX1P, transport; HET: PIA; 2.7A {Aequorea victoria}
Probab=46.98 E-value=11 Score=37.27 Aligned_cols=21 Identities=10% Similarity=0.335 Sum_probs=16.1
Q ss_pred EEEEeCCCChhhHhHHH-HHHH
Q 015013 376 LVVLYAPWCQFCQVIDV-FMQI 396 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p-~~ee 396 (414)
|+.|..+|||+|++... .|++
T Consensus 263 VvVYsk~~CPyC~~Ak~~LL~~ 284 (362)
T 2jad_A 263 IFVASKTYCPYSHAALNTLFEK 284 (362)
T ss_dssp EEEEECTTCHHHHHHHHHHHTT
T ss_pred EEEEEcCCCcchHHHHHHHHHH
Confidence 55689999999998765 4543
No 338
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=45.18 E-value=17 Score=29.69 Aligned_cols=22 Identities=18% Similarity=0.265 Sum_probs=18.3
Q ss_pred EEEEeCCCChhhHhHHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQIR 397 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee~ 397 (414)
+..|+.|+|+.|++....+++.
T Consensus 5 i~iY~~~~C~~c~ka~~~L~~~ 26 (120)
T 3fz4_A 5 LTFYEYPKCSTCRRAKAELDDL 26 (120)
T ss_dssp EEEEECSSCHHHHHHHHHHHHH
T ss_pred EEEEeCCCChHHHHHHHHHHHc
Confidence 4567899999999988888754
No 339
>2h8l_A Protein disulfide-isomerase A3; thioredoxin-like fold; 2.00A {Homo sapiens}
Probab=44.22 E-value=28 Score=31.60 Aligned_cols=44 Identities=7% Similarity=0.027 Sum_probs=31.1
Q ss_pred CCeEecC-ccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLN-RTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~-~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..|..|+ .++++.++. .+..++|-|+++|| ....+.|.++|+.+
T Consensus 6 P~v~~l~s~~~~~~~l~---~~~v~vvgff~~~~---~~~~~~f~~~A~~l 50 (252)
T 2h8l_A 6 PASVPLRTEEEFKKFIS---DKDASIVGFFDDSF---SEAHSEFLKAASNL 50 (252)
T ss_dssp CCEEECCSHHHHHHHHT---SSSCEEEEEESCTT---SHHHHHHHHHHHHT
T ss_pred CCceeecCHHHHHHHhh---cCCeEEEEEECCCC---ChHHHHHHHHHHhc
Confidence 4567774 556666664 67789999999985 44566777777765
No 340
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=41.63 E-value=16 Score=31.91 Aligned_cols=32 Identities=3% Similarity=-0.147 Sum_probs=25.5
Q ss_pred CCCcEEEEEe-CCCChhhHhHHHHHHHHHHHHH
Q 015013 371 RQEPWLVVLY-APWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 371 ~~~~vlV~Fy-ApWC~~Ck~m~p~~ee~~~i~a 402 (414)
.++.+|+.|| ..|||.|..-.+.|.+.++.|.
T Consensus 41 ~gk~vVL~fyP~~fTp~Ct~e~~~f~~~~~ef~ 73 (171)
T 2xhf_A 41 RGRKGILFSVVGAFVPGSNNHIPEYLSLYDKFK 73 (171)
T ss_dssp TTSEEEEEECSCTTCTTTTSSHHHHHHTHHHHH
T ss_pred CCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHH
Confidence 3466777777 6799999999999998877764
No 341
>2d8c_A Phosphatidylcholine:ceramide cholinephosphotransferase 1; cell-free protein synthesis, protein regulation, lipid metabolism, structural genomics; NMR {Mus musculus} SCOP: a.60.1.2
Probab=39.79 E-value=13 Score=29.50 Aligned_cols=22 Identities=14% Similarity=0.188 Sum_probs=19.3
Q ss_pred EEeCccccHHHHHHHHHhCCCC
Q 015013 254 WNPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 254 i~PL~dWt~~DVw~Yi~~~~lP 275 (414)
-.|+..|+.+||..|++..++.
T Consensus 14 ~~~v~~Ws~edV~~WL~~~Gl~ 35 (97)
T 2d8c_A 14 MKEVVYWSPKKVADWLLENAMP 35 (97)
T ss_dssp CSCCSSCCTTHHHHHHHHTTCT
T ss_pred CCchhhCCHHHHHHHHHHcCCH
Confidence 3688999999999999998864
No 342
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=39.16 E-value=18 Score=29.45 Aligned_cols=21 Identities=24% Similarity=0.422 Sum_probs=17.7
Q ss_pred EEEEeCCCChhhHhHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQI 396 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee 396 (414)
+..|+.|+|+.|+.....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (120)
T 3gkx_A 6 TLFLQYPACSTCQKAKKWLIE 26 (120)
T ss_dssp CEEEECTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456889999999998888775
No 343
>2gle_A Neurabin-1; SAM domain, scaffold, protein protein interaction, protein binding; NMR {Rattus norvegicus}
Probab=38.55 E-value=9.4 Score=28.27 Aligned_cols=21 Identities=10% Similarity=0.129 Sum_probs=18.8
Q ss_pred EeCccccHHHHHHHHHhCCCC
Q 015013 255 NPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~~lP 275 (414)
.|+.+||.+||-.|+...+++
T Consensus 2 ~~v~~Ws~~~V~~WL~~~gl~ 22 (74)
T 2gle_A 2 HMVHEWSVQQVSHWLVGLSLD 22 (74)
T ss_dssp CCGGGCCSGGGHHHHHHTTTH
T ss_pred CCcccCCHHHHHHHHHHCCCH
Confidence 489999999999999999864
No 344
>3us3_A Calsequestrin-1; calcium-binding protein; 1.74A {Oryctolagus cuniculus} PDB: 1a8y_A 3v1w_A* 3trq_A* 3trp_A* 3uom_A
Probab=37.35 E-value=51 Score=31.75 Aligned_cols=50 Identities=12% Similarity=-0.100 Sum_probs=37.9
Q ss_pred CCeEecCccchHHHHhhhcCCCcEEEEEeCCCChhhHhHHHHHHHHHHHHH
Q 015013 352 QNLVTLNRTGMENLARLDHRQEPWLVVLYAPWCQFCQVIDVFMQIRFQIIA 402 (414)
Q Consensus 352 ~~v~~l~~~~~e~~v~~~~~~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~a 402 (414)
..|..++.+++..+.. ....++.++.|+.++|+.|..+.+.|+++++.+-
T Consensus 228 p~v~elt~~~~~~~~~-~~~~~~~~~~f~~~~~~~~~~~~~~l~~vA~~~~ 277 (367)
T 3us3_A 228 STLRKLKPESMYETWE-DDMDGIHIVAFAEEADPDGYEFLEILKSVAQDNT 277 (367)
T ss_dssp CSEEECCGGGHHHHHH-SCBTTEEEEEECCTTSHHHHHHHHHHHHHHHHTT
T ss_pred cceeecChhhHHHHHh-hccCCcEEEEEEcCCChhHHHHHHHHHHHHHHcC
Confidence 5688899999877654 1124466777999999999999988888776653
No 345
>3ec3_A Protein disulfide-isomerase A4; thioredoxin-like fold, endoplasmic reticulum, glycoprotein, redox-active center; 1.92A {Rattus norvegicus}
Probab=35.04 E-value=39 Score=30.63 Aligned_cols=44 Identities=2% Similarity=-0.074 Sum_probs=32.1
Q ss_pred CCeEecC-ccchHHHHhhhcC-CCcEEEEEeCCCChhhHhHHHHHHHHHHHH
Q 015013 352 QNLVTLN-RTGMENLARLDHR-QEPWLVVLYAPWCQFCQVIDVFMQIRFQII 401 (414)
Q Consensus 352 ~~v~~l~-~~~~e~~v~~~~~-~~~vlV~FyApWC~~Ck~m~p~~ee~~~i~ 401 (414)
..|..++ .+++++++. . +..+||-|+.++| ....+.|.++|+.+
T Consensus 6 P~v~~l~s~~~~~~~~~---~~~~v~vVgff~~~~---~~~~~~F~~~A~~l 51 (250)
T 3ec3_A 6 PPSKEILTLKQVQEFLK---DGDDVVILGVFQGVG---DPGYLQYQDAANTL 51 (250)
T ss_dssp CSSEECCCHHHHHHHHH---HCSSCEEEEECSCTT---CHHHHHHHHHHHHH
T ss_pred CCceecCCHHHHHHHHh---cCCCeEEEEEEcCCC---chHHHHHHHHHHhh
Confidence 3466664 466777665 5 7899999999985 46777888877765
No 346
>3bs7_A Protein aveugle; sterIle alpha motif (SAM) domain, cytoplasm, membrane, sensory transduction, vision, signaling protein; 1.90A {Drosophila melanogaster}
Probab=33.48 E-value=11 Score=28.10 Aligned_cols=18 Identities=17% Similarity=0.170 Sum_probs=16.5
Q ss_pred EeCccccHHHHHHHHHhC
Q 015013 255 NPVANVKGNDIWNFLRTM 272 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~ 272 (414)
.|+..||.+||-.|+...
T Consensus 1 k~v~~Wt~~~V~~WL~~~ 18 (78)
T 3bs7_A 1 KAVYLWTVSDVLKWYRRH 18 (78)
T ss_dssp CCGGGCCHHHHHHHHHHH
T ss_pred CChhhCCHHHHHHHHHHH
Confidence 488999999999999996
No 347
>2wul_A Glutaredoxin related protein 5; chromosome 14 open reading frame 87, oxidoreductase, thiored family, GLRX5, FLB4739; HET: GSH; 2.40A {Homo sapiens}
Probab=32.73 E-value=25 Score=28.82 Aligned_cols=16 Identities=19% Similarity=0.623 Sum_probs=13.4
Q ss_pred CCCChhhHhHHHHHHH
Q 015013 381 APWCQFCQVIDVFMQI 396 (414)
Q Consensus 381 ApWC~~Ck~m~p~~ee 396 (414)
+|.||+|++....|.+
T Consensus 32 ~P~C~fc~~ak~lL~~ 47 (118)
T 2wul_A 32 QPQCGFSNAVVQILRL 47 (118)
T ss_dssp SBSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHH
Confidence 4789999999888875
No 348
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=31.97 E-value=21 Score=29.16 Aligned_cols=21 Identities=10% Similarity=0.246 Sum_probs=17.4
Q ss_pred EEEEeCCCChhhHhHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQI 396 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee 396 (414)
+..|+.|+|+.|++....+++
T Consensus 7 i~iY~~p~C~~c~ka~~~L~~ 27 (121)
T 3rdw_A 7 VTIYHNPRCSKSRETLALVEQ 27 (121)
T ss_dssp CEEECCTTCHHHHHHHHHHHT
T ss_pred EEEEECCCCHHHHHHHHHHHH
Confidence 456789999999998887764
No 349
>1kw4_A Polyhomeotic; SAM domain, polycomb group, polymer, DNA binding protein; 1.75A {Drosophila melanogaster} SCOP: a.60.1.2 PDB: 1pk1_A
Probab=30.72 E-value=22 Score=27.61 Aligned_cols=20 Identities=25% Similarity=0.564 Sum_probs=17.5
Q ss_pred EeCccccHHHHHHHHHhC-CC
Q 015013 255 NPVANVKGNDIWNFLRTM-DV 274 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~-~l 274 (414)
.|+..||.+||..|+... |+
T Consensus 12 ~~v~~Ws~edV~~wL~~l~gl 32 (89)
T 1kw4_A 12 PPISSWSVDDVSNFIRELPGC 32 (89)
T ss_dssp CCGGGCCHHHHHHHHHTSTTC
T ss_pred CCchhCCHHHHHHHHHHCcCh
Confidence 489999999999999987 44
No 350
>3bq7_A Diacylglycerol kinase delta; SAM domain, polymerization domain, alternative splicing, cytoplasm, membrane, metal-binding, phorbol-ester binding; 2.90A {Homo sapiens}
Probab=29.17 E-value=25 Score=26.54 Aligned_cols=27 Identities=11% Similarity=0.187 Sum_probs=21.4
Q ss_pred EEeCccccHHHHHHHHHhCCCC-CChhh
Q 015013 254 WNPVANVKGNDIWNFLRTMDVP-INSLH 280 (414)
Q Consensus 254 i~PL~dWt~~DVw~Yi~~~~lP-~npLY 280 (414)
-.|+..||.+||-.|+...|++ |.+.+
T Consensus 4 ~~~v~~Ws~~~V~~WL~~lgl~~Y~~~F 31 (81)
T 3bq7_A 4 TRPVHLWGTEEVAAWLEHLSLCEYKDIF 31 (81)
T ss_dssp -CCGGGCCHHHHHHHHHHTTCGGGHHHH
T ss_pred CCChhhCCHHHHHHHHHHCCCHHHHHHH
Confidence 4689999999999999999875 44433
No 351
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=29.02 E-value=31 Score=28.04 Aligned_cols=21 Identities=14% Similarity=0.275 Sum_probs=17.3
Q ss_pred EEEEeCCCChhhHhHHHHHHH
Q 015013 376 LVVLYAPWCQFCQVIDVFMQI 396 (414)
Q Consensus 376 lV~FyApWC~~Ck~m~p~~ee 396 (414)
+..|+.|+|+.|++....+++
T Consensus 6 i~iY~~p~C~~c~ka~~~L~~ 26 (119)
T 3f0i_A 6 VVIYHNPKCSKSRETLALLEN 26 (119)
T ss_dssp CEEECCTTCHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHH
Confidence 456789999999998887775
No 352
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=28.59 E-value=1.9e+02 Score=21.80 Aligned_cols=66 Identities=18% Similarity=0.237 Sum_probs=42.6
Q ss_pred HHHHHHHHHcCCcEEEEechHHHHHHHHHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEcC
Q 015013 102 EIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMFP 172 (414)
Q Consensus 102 eil~~a~~~~~~~i~vafSGGKDSvlL~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~P 172 (414)
+.++..++..+-.+. .++.|++. +.++.... ..++++|....-...+++++++.+..++++.++..
T Consensus 16 ~~l~~~L~~~g~~v~-~~~~~~~a--l~~~~~~~--~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~ 81 (120)
T 3f6p_A 16 DILEFNLRKEGYEVH-CAHDGNEA--VEMVEELQ--PDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTA 81 (120)
T ss_dssp HHHHHHHHHTTCEEE-EESSHHHH--HHHHHTTC--CSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEE
T ss_pred HHHHHHHHhCCEEEE-EeCCHHHH--HHHHhhCC--CCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEEC
Confidence 455666666654454 44445443 44444443 46788898876667788999998877888776643
No 353
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=27.05 E-value=2.2e+02 Score=22.00 Aligned_cols=70 Identities=14% Similarity=0.104 Sum_probs=42.5
Q ss_pred HHHHHHHHHHcCCcEEEEechHHHHHHHHHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh-CCcEEEEcCC
Q 015013 101 LEIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD 173 (414)
Q Consensus 101 ~eil~~a~~~~~~~i~vafSGGKDSvlL~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~-gl~i~~~~P~ 173 (414)
.+.++..++..+-.+. .++.+.+. +.++......+.++++|....-....++++++.+.+ ++++.++...
T Consensus 16 ~~~l~~~l~~~g~~v~-~~~~~~~a--~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 16 LQNIKFLLEIDGNEVL-TASSSTEG--LRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp HHHHHHHHHHTTCEEE-EESSHHHH--HHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECT
T ss_pred HHHHHHHHHhCCceEE-EeCCHHHH--HHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECC
Confidence 3556666776665444 44545443 333443334567888898765556778888888876 3677666443
No 354
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=25.18 E-value=1.9e+02 Score=23.08 Aligned_cols=70 Identities=7% Similarity=0.022 Sum_probs=41.9
Q ss_pred HHHHHHHHHcCCcEEEEechHHHHHHHHHHHhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHh-CCcEEEEcCC
Q 015013 102 EIMDRALEKFGNDIAIAFSGAEDVALIEYAHLTGRPFRVFSLDTGRLNPETYRFFDEVEKHF-GIRIEYMFPD 173 (414)
Q Consensus 102 eil~~a~~~~~~~i~vafSGGKDSvlL~L~~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~-gl~i~~~~P~ 173 (414)
+.|+..++..+-.++..++.+++. +.++.+..+++.++++|....-...+++++++.+.. ++++.++...
T Consensus 50 ~~l~~~L~~~g~~v~~~~~~~~~a--l~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ls~~ 120 (157)
T 3hzh_A 50 KQLTQIFTSEGFNIIDTAADGEEA--VIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIMISAL 120 (157)
T ss_dssp HHHHHHHHHTTCEEEEEESSHHHH--HHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHhCCCeEEEEECCHHHH--HHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEEEecc
Confidence 445555566554454255555543 333444433456888898765556778888888766 4677666443
No 355
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=23.93 E-value=1.6e+02 Score=27.36 Aligned_cols=75 Identities=13% Similarity=0.150 Sum_probs=49.7
Q ss_pred CHHHHHHHHHHHc-CCcEEEEechHHH--HHHHHHHHhcCCCeEEEEEe-CCC--CcHHHHHHHHHHH---HHhCCcE--
Q 015013 99 SPLEIMDRALEKF-GNDIAIAFSGAED--VALIEYAHLTGRPFRVFSLD-TGR--LNPETYRFFDEVE---KHFGIRI-- 167 (414)
Q Consensus 99 ~a~eil~~a~~~~-~~~i~vafSGGKD--SvlL~L~~~~~~~i~VvflD-TG~--~fpET~~~v~~l~---~~~gl~i-- 167 (414)
.--++++.+++.+ |..++-+.||++| --++.++.+.+-.+.+.+.| .|. ...+.++++++.. ..+|++-
T Consensus 86 ~~~~v~~aal~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~ 165 (271)
T 2yci_X 86 TNPDAIEAGLKVHRGHAMINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTE 165 (271)
T ss_dssp SCHHHHHHHHHHCCSCCEEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred CCHHHHHHHHHhCCCCCEEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCccc
Confidence 3457888888887 4557778899888 55778899988888788776 332 2344566655543 4568863
Q ss_pred EEEcCC
Q 015013 168 EYMFPD 173 (414)
Q Consensus 168 ~~~~P~ 173 (414)
.++-|.
T Consensus 166 IilDPg 171 (271)
T 2yci_X 166 LYIDPL 171 (271)
T ss_dssp EEEECC
T ss_pred EEEecC
Confidence 344443
No 356
>1v85_A Similar to ring finger protein 36; apoptosis, neuron, cell death, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=23.48 E-value=29 Score=26.87 Aligned_cols=22 Identities=9% Similarity=0.140 Sum_probs=19.6
Q ss_pred EEEeCccccHHHHHHHHHhCCC
Q 015013 253 KWNPVANVKGNDIWNFLRTMDV 274 (414)
Q Consensus 253 ki~PL~dWt~~DVw~Yi~~~~l 274 (414)
.-.|+..||.+||-.|+...++
T Consensus 13 ~~~~v~~Wt~~dV~~WL~~~gl 34 (91)
T 1v85_A 13 VHKAVDKWTTEEVVLWLEQLGP 34 (91)
T ss_dssp HHSCGGGCCHHHHHHHHHHHCG
T ss_pred CCCCcccCCHHHHHHHHHHcCC
Confidence 3478999999999999999887
No 357
>1vb5_A Translation initiation factor EIF-2B; 2.20A {Pyrococcus horikoshii} SCOP: c.124.1.5
Probab=22.90 E-value=4.5e+02 Score=24.23 Aligned_cols=65 Identities=17% Similarity=0.208 Sum_probs=40.3
Q ss_pred HHHHHHHHcC-CcEEEEechHHHHHHHHHH---HhcCCCeEEEEEeCCCCcHHHHHHHHHHHHHhCCcEEEEc
Q 015013 103 IMDRALEKFG-NDIAIAFSGAEDVALIEYA---HLTGRPFRVFSLDTGRLNPETYRFFDEVEKHFGIRIEYMF 171 (414)
Q Consensus 103 il~~a~~~~~-~~i~vafSGGKDSvlL~L~---~~~~~~i~VvflDTG~~fpET~~~v~~l~~~~gl~i~~~~ 171 (414)
|-+.+.+... +..+++++.+ ++++.++ .+.++++.|+..+|--.+.- .....++.+ .|+++..+.
T Consensus 99 Ia~~a~~~I~~g~~IlT~~~s--~Tv~~~l~~a~~~~~~~~V~v~etrP~~qG-~~~a~~L~~-~gI~vtli~ 167 (276)
T 1vb5_A 99 LASIGAQLIDDGDVIITHSFS--STVLEIIRTAKERKKRFKVILTESSPDYEG-LHLARELEF-SGIEFEVIT 167 (276)
T ss_dssp HHHHHHHHCCTTEEEECCSCC--HHHHHHHHHHHHTTCCEEEEEECCTTTTHH-HHHHHHHHH-TTCCEEEEC
T ss_pred HHHHHHHHccCCCEEEEeCCC--hHHHHHHHHHHHcCCeEEEEEeCCCcchhh-HHHHHHHHH-CCCCEEEEc
Confidence 3345555554 3455555533 3555433 34477889887777666655 777778877 699988763
No 358
>2e8o_A SAM domain and HD domain-containing protein 1; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.01 E-value=33 Score=27.15 Aligned_cols=22 Identities=14% Similarity=0.120 Sum_probs=20.0
Q ss_pred EEeCccccHHHHHHHHHhCCCC
Q 015013 254 WNPVANVKGNDIWNFLRTMDVP 275 (414)
Q Consensus 254 i~PL~dWt~~DVw~Yi~~~~lP 275 (414)
-.|+..|+.+||-.|+...|+.
T Consensus 24 ~~~v~~Ws~~~V~~WL~~lgl~ 45 (103)
T 2e8o_A 24 HPDYKTWGPEQVCSFLRRGGFE 45 (103)
T ss_dssp CSCGGGCHHHHHHHHHHHHTCC
T ss_pred ccChhhCCHHHHHHHHHHcCCC
Confidence 4789999999999999999876
No 359
>3bs5_B Connector enhancer of kinase suppressor of RAS 2; sterIle alpha motif, SAM domain, SAM domain dimer, SAM domain complex, cytoplasm, membrane; 2.00A {Homo sapiens}
Probab=21.37 E-value=43 Score=24.90 Aligned_cols=19 Identities=16% Similarity=0.522 Sum_probs=16.8
Q ss_pred EeCccccHHHHHHHHHhCC
Q 015013 255 NPVANVKGNDIWNFLRTMD 273 (414)
Q Consensus 255 ~PL~dWt~~DVw~Yi~~~~ 273 (414)
.|+..||.+||-.|+...+
T Consensus 2 ~~v~~Ws~~~V~~WL~~l~ 20 (80)
T 3bs5_B 2 EPVSKWSPSQVVDWMKGLD 20 (80)
T ss_dssp CCGGGCCHHHHHHHHHTSC
T ss_pred CccccCCHHHHHHHHHHHh
Confidence 5899999999999999763
No 360
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=20.04 E-value=2.2e+02 Score=26.29 Aligned_cols=67 Identities=16% Similarity=0.270 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHc-CCcEEEEechHHHH--HHHHHHHhcCCCeEEEEEe-CCC--CcHHHHHHHHHH---HHHhCCc
Q 015013 100 PLEIMDRALEKF-GNDIAIAFSGAEDV--ALIEYAHLTGRPFRVFSLD-TGR--LNPETYRFFDEV---EKHFGIR 166 (414)
Q Consensus 100 a~eil~~a~~~~-~~~i~vafSGGKDS--vlL~L~~~~~~~i~VvflD-TG~--~fpET~~~v~~l---~~~~gl~ 166 (414)
--++++.+++.+ |..++-+.||++|. -++.++.+.+..+.+.+.| .|. .+.+..+++++. ...+|++
T Consensus 78 ~~~v~~aAl~a~~Ga~iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~ 153 (262)
T 1f6y_A 78 NIKAIEAGLKKCKNRAMINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLP 153 (262)
T ss_dssp CHHHHHHHHHHCSSCEEEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHhhCCCCCEEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Confidence 346888888886 45577788998887 5778899988777777765 342 233444454443 3456875
Done!