Query 015014
Match_columns 414
No_of_seqs 289 out of 2089
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 02:16:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015014.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/015014hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02851 3-hydroxyisobutyryl-C 100.0 1.1E-63 2.4E-68 501.9 37.6 326 65-411 41-370 (407)
2 KOG1684 Enoyl-CoA hydratase [L 100.0 2.1E-64 4.7E-69 481.4 28.9 328 65-410 37-365 (401)
3 PLN02988 3-hydroxyisobutyryl-C 100.0 1.6E-63 3.5E-68 499.3 35.4 325 66-411 9-337 (381)
4 PLN02157 3-hydroxyisobutyryl-C 100.0 8.6E-63 1.9E-67 495.7 35.5 326 65-411 36-365 (401)
5 PLN02874 3-hydroxyisobutyryl-C 100.0 6E-60 1.3E-64 475.1 34.4 325 64-411 9-337 (379)
6 PRK05617 3-hydroxyisobutyryl-C 100.0 1E-59 2.2E-64 468.0 32.4 320 67-410 4-323 (342)
7 KOG1680 Enoyl-CoA hydratase [L 100.0 1.5E-55 3.2E-60 409.6 22.0 256 65-413 35-290 (290)
8 PRK05980 enoyl-CoA hydratase; 100.0 4.1E-54 8.9E-59 413.6 28.5 257 67-410 4-260 (260)
9 PRK05862 enoyl-CoA hydratase; 100.0 9.2E-54 2E-58 410.5 28.7 253 64-410 2-254 (257)
10 PRK09076 enoyl-CoA hydratase; 100.0 1.4E-53 3.1E-58 409.4 29.3 252 67-410 4-255 (258)
11 PRK05809 3-hydroxybutyryl-CoA 100.0 1.1E-53 2.5E-58 410.6 28.2 257 63-410 1-257 (260)
12 PRK06127 enoyl-CoA hydratase; 100.0 1.7E-53 3.6E-58 411.2 28.7 258 64-410 9-266 (269)
13 PLN02600 enoyl-CoA hydratase 100.0 1.3E-53 2.8E-58 408.0 27.3 247 74-410 2-248 (251)
14 PRK06142 enoyl-CoA hydratase; 100.0 1.6E-53 3.4E-58 412.2 28.1 259 65-410 5-270 (272)
15 PRK07657 enoyl-CoA hydratase; 100.0 2.2E-53 4.8E-58 408.5 28.1 255 66-410 3-257 (260)
16 PRK06494 enoyl-CoA hydratase; 100.0 2.8E-53 6.1E-58 407.5 28.6 254 63-410 1-256 (259)
17 PRK09674 enoyl-CoA hydratase-i 100.0 2.8E-53 6.1E-58 406.6 28.4 250 67-410 3-252 (255)
18 PLN02664 enoyl-CoA hydratase/d 100.0 3.2E-53 7E-58 410.5 28.8 254 73-412 14-274 (275)
19 PRK08150 enoyl-CoA hydratase; 100.0 4.2E-53 9.2E-58 405.3 28.8 251 66-410 2-252 (255)
20 PRK06143 enoyl-CoA hydratase; 100.0 4.1E-53 8.9E-58 405.6 28.1 249 64-401 4-252 (256)
21 PRK08140 enoyl-CoA hydratase; 100.0 5.5E-53 1.2E-57 406.2 28.5 257 64-410 2-259 (262)
22 PRK07799 enoyl-CoA hydratase; 100.0 6.5E-53 1.4E-57 405.9 28.9 256 65-410 4-260 (263)
23 PRK08138 enoyl-CoA hydratase; 100.0 1.1E-52 2.4E-57 403.9 29.1 253 65-410 6-258 (261)
24 PRK08139 enoyl-CoA hydratase; 100.0 9.2E-53 2E-57 405.4 28.6 256 63-410 8-263 (266)
25 TIGR02280 PaaB1 phenylacetate 100.0 7.6E-53 1.7E-57 403.9 27.7 252 69-410 2-253 (256)
26 PRK07658 enoyl-CoA hydratase; 100.0 9.1E-53 2E-57 403.6 27.8 252 67-410 3-254 (257)
27 PRK09120 p-hydroxycinnamoyl Co 100.0 1.1E-52 2.4E-57 406.5 28.2 259 64-408 6-267 (275)
28 PRK09245 enoyl-CoA hydratase; 100.0 1.1E-52 2.4E-57 405.0 27.9 257 67-410 4-263 (266)
29 PRK08252 enoyl-CoA hydratase; 100.0 1.6E-52 3.5E-57 401.2 28.7 248 67-410 4-251 (254)
30 PRK06563 enoyl-CoA hydratase; 100.0 9.5E-53 2.1E-57 403.0 27.0 250 69-410 2-252 (255)
31 PRK07468 enoyl-CoA hydratase; 100.0 1.6E-52 3.4E-57 403.0 28.3 257 65-410 3-259 (262)
32 PRK05674 gamma-carboxygeranoyl 100.0 1.4E-52 3E-57 403.9 27.5 258 64-410 3-261 (265)
33 PRK05995 enoyl-CoA hydratase; 100.0 1.8E-52 3.9E-57 402.7 28.3 258 63-410 1-259 (262)
34 TIGR03210 badI 2-ketocyclohexa 100.0 1.7E-52 3.7E-57 401.4 28.0 255 65-412 1-255 (256)
35 TIGR01929 menB naphthoate synt 100.0 1.3E-52 2.9E-57 402.8 27.0 256 67-412 3-258 (259)
36 PRK08258 enoyl-CoA hydratase; 100.0 2E-52 4.4E-57 405.3 28.5 256 67-410 18-274 (277)
37 PRK05981 enoyl-CoA hydratase; 100.0 2E-52 4.3E-57 403.2 28.2 261 63-410 1-263 (266)
38 PRK06210 enoyl-CoA hydratase; 100.0 1.6E-52 3.5E-57 405.2 26.9 263 63-412 2-271 (272)
39 PRK07511 enoyl-CoA hydratase; 100.0 3.7E-52 8E-57 400.1 28.8 254 68-410 5-258 (260)
40 PRK07327 enoyl-CoA hydratase; 100.0 3.6E-52 7.8E-57 401.7 27.7 257 64-410 9-265 (268)
41 PLN02888 enoyl-CoA hydratase 100.0 6.1E-52 1.3E-56 399.3 28.7 254 63-410 6-261 (265)
42 PRK03580 carnitinyl-CoA dehydr 100.0 6.6E-52 1.4E-56 398.5 28.3 251 67-410 4-258 (261)
43 PRK07659 enoyl-CoA hydratase; 100.0 4.9E-52 1.1E-56 399.2 27.0 253 65-410 5-257 (260)
44 PRK11423 methylmalonyl-CoA dec 100.0 6E-52 1.3E-56 398.6 27.2 256 63-410 1-258 (261)
45 PRK05864 enoyl-CoA hydratase; 100.0 8.5E-52 1.8E-56 400.8 27.5 263 64-412 7-274 (276)
46 PRK06144 enoyl-CoA hydratase; 100.0 8.6E-52 1.9E-56 397.8 27.0 252 65-410 7-259 (262)
47 PRK06495 enoyl-CoA hydratase; 100.0 1.3E-51 2.8E-56 395.6 28.0 253 64-410 2-254 (257)
48 PRK07260 enoyl-CoA hydratase; 100.0 1.3E-51 2.7E-56 395.3 27.5 250 66-401 2-251 (255)
49 PRK06688 enoyl-CoA hydratase; 100.0 1.3E-51 2.7E-56 396.2 27.4 254 66-412 5-258 (259)
50 COG1024 CaiD Enoyl-CoA hydrata 100.0 1.5E-51 3.3E-56 395.2 27.8 253 65-410 4-257 (257)
51 PRK07396 dihydroxynaphthoic ac 100.0 1.7E-51 3.6E-56 398.0 28.2 258 64-412 11-268 (273)
52 PRK08260 enoyl-CoA hydratase; 100.0 1.6E-51 3.5E-56 402.6 27.5 262 64-411 2-276 (296)
53 PRK07509 enoyl-CoA hydratase; 100.0 3.3E-51 7.1E-56 393.9 27.8 255 65-410 2-260 (262)
54 PRK08259 enoyl-CoA hydratase; 100.0 4E-51 8.7E-56 391.4 26.8 248 67-408 4-251 (254)
55 PLN02921 naphthoate synthase 100.0 1.1E-50 2.5E-55 399.9 29.2 259 64-412 63-322 (327)
56 PLN03214 probable enoyl-CoA hy 100.0 7.8E-51 1.7E-55 394.0 27.3 254 63-403 8-263 (278)
57 PRK05870 enoyl-CoA hydratase; 100.0 5.2E-51 1.1E-55 389.6 25.2 243 67-401 4-247 (249)
58 PRK07938 enoyl-CoA hydratase; 100.0 1.2E-50 2.7E-55 387.0 26.3 245 70-408 5-249 (249)
59 PRK06023 enoyl-CoA hydratase; 100.0 1.3E-50 2.8E-55 387.4 26.3 243 67-401 4-249 (251)
60 PRK06072 enoyl-CoA hydratase; 100.0 2.8E-50 6E-55 384.4 28.4 244 68-410 2-245 (248)
61 TIGR03189 dienoyl_CoA_hyt cycl 100.0 3.7E-50 8E-55 384.0 27.5 245 68-410 3-248 (251)
62 PRK12478 enoyl-CoA hydratase; 100.0 2.6E-50 5.5E-55 393.9 25.7 260 63-412 2-280 (298)
63 PRK07827 enoyl-CoA hydratase; 100.0 6E-50 1.3E-54 384.7 27.6 254 65-410 5-258 (260)
64 PRK07854 enoyl-CoA hydratase; 100.0 1.7E-49 3.7E-54 377.8 27.6 239 68-410 2-240 (243)
65 PRK08321 naphthoate synthase; 100.0 1.2E-49 2.5E-54 390.1 27.2 261 65-411 22-296 (302)
66 PRK07110 polyketide biosynthes 100.0 2.1E-49 4.6E-54 378.5 27.5 245 64-401 3-247 (249)
67 PRK07112 polyketide biosynthes 100.0 2.2E-49 4.8E-54 379.6 27.5 252 64-411 2-253 (255)
68 PF00378 ECH: Enoyl-CoA hydrat 100.0 3E-50 6.4E-55 383.5 20.5 242 70-401 2-243 (245)
69 PRK06190 enoyl-CoA hydratase; 100.0 7.3E-49 1.6E-53 376.3 27.8 236 63-390 1-236 (258)
70 TIGR03222 benzo_boxC benzoyl-C 100.0 6.7E-47 1.5E-51 393.0 24.7 255 65-410 255-541 (546)
71 PRK08184 benzoyl-CoA-dihydrodi 100.0 8.5E-47 1.8E-51 393.5 24.7 258 64-411 258-546 (550)
72 PRK08290 enoyl-CoA hydratase; 100.0 1.8E-46 3.9E-51 365.2 25.3 244 63-392 1-262 (288)
73 PRK05869 enoyl-CoA hydratase; 100.0 1.7E-46 3.7E-51 352.3 22.8 193 65-266 2-198 (222)
74 PRK11730 fadB multifunctional 100.0 1.7E-45 3.7E-50 397.4 27.2 289 67-403 7-296 (715)
75 PRK08788 enoyl-CoA hydratase; 100.0 3.8E-45 8.3E-50 354.5 26.7 254 63-402 12-275 (287)
76 KOG1681 Enoyl-CoA isomerase [L 100.0 2.9E-46 6.4E-51 336.6 15.5 266 64-413 17-292 (292)
77 KOG1679 Enoyl-CoA hydratase [L 100.0 3E-46 6.4E-51 333.8 14.7 252 73-410 37-288 (291)
78 PRK08272 enoyl-CoA hydratase; 100.0 8E-45 1.7E-49 356.2 24.1 197 64-267 8-224 (302)
79 PRK06213 enoyl-CoA hydratase; 100.0 3E-44 6.4E-49 339.0 22.4 223 67-383 4-227 (229)
80 PRK11154 fadJ multifunctional 100.0 1.2E-43 2.6E-48 383.0 29.8 284 68-404 7-294 (708)
81 TIGR03200 dearomat_oah 6-oxocy 100.0 1.8E-43 3.9E-48 346.5 27.5 286 77-402 38-327 (360)
82 TIGR02440 FadJ fatty oxidation 100.0 1.2E-43 2.7E-48 382.1 26.8 281 70-404 4-289 (699)
83 TIGR02437 FadB fatty oxidation 100.0 7.3E-43 1.6E-47 376.3 27.4 290 67-403 7-296 (714)
84 COG0447 MenB Dihydroxynaphthoi 100.0 3.3E-43 7.2E-48 314.7 13.5 261 64-413 16-278 (282)
85 TIGR02441 fa_ox_alpha_mit fatt 100.0 5.3E-41 1.1E-45 362.7 27.5 299 58-403 5-320 (737)
86 PLN02267 enoyl-CoA hydratase/i 100.0 2.7E-41 5.9E-46 320.5 21.8 190 68-265 2-195 (239)
87 KOG0016 Enoyl-CoA hydratase/is 100.0 2.5E-39 5.5E-44 298.4 22.3 258 63-406 4-265 (266)
88 cd06558 crotonase-like Crotona 100.0 5.6E-39 1.2E-43 295.0 19.7 193 69-268 2-194 (195)
89 TIGR03222 benzo_boxC benzoyl-C 100.0 1.4E-38 3E-43 330.9 21.5 201 63-268 8-225 (546)
90 KOG1682 Enoyl-CoA isomerase [L 100.0 3.5E-38 7.7E-43 279.9 20.5 248 74-413 39-286 (287)
91 PRK08184 benzoyl-CoA-dihydrodi 100.0 9.4E-38 2E-42 325.7 21.2 201 63-268 12-229 (550)
92 cd07014 S49_SppA Signal peptid 99.8 3.5E-19 7.6E-24 161.6 11.1 141 95-259 23-173 (177)
93 PF13766 ECH_C: 2-enoyl-CoA Hy 99.8 4.5E-19 9.7E-24 149.9 9.7 99 295-410 2-100 (118)
94 cd07020 Clp_protease_NfeD_1 No 99.8 1.3E-18 2.9E-23 159.2 12.9 145 78-256 2-166 (187)
95 cd07019 S49_SppA_1 Signal pept 99.6 1.1E-15 2.5E-20 142.5 9.9 101 77-199 2-104 (211)
96 cd07022 S49_Sppa_36K_type Sign 99.5 2.2E-13 4.8E-18 127.3 13.5 96 83-201 13-109 (214)
97 cd00394 Clp_protease_like Case 99.5 1.9E-13 4.1E-18 121.9 12.1 135 91-252 8-161 (161)
98 TIGR00705 SppA_67K signal pept 99.5 1.8E-13 4E-18 145.1 11.0 155 74-254 307-510 (584)
99 cd07016 S14_ClpP_1 Caseinolyti 99.4 9.5E-13 2.1E-17 117.4 11.7 130 94-252 15-160 (160)
100 cd07023 S49_Sppa_N_C Signal pe 99.4 2.8E-12 6.1E-17 119.3 12.7 86 93-200 16-101 (208)
101 TIGR00706 SppA_dom signal pept 99.3 1.5E-11 3.3E-16 114.3 13.9 137 96-260 15-200 (207)
102 cd07021 Clp_protease_NfeD_like 99.2 2.2E-10 4.8E-15 103.9 12.4 135 90-255 9-171 (178)
103 cd07018 S49_SppA_67K_type Sign 99.2 2.5E-10 5.5E-15 107.3 11.4 89 91-202 26-114 (222)
104 KOG1683 Hydroxyacyl-CoA dehydr 98.9 2.3E-09 4.9E-14 105.0 6.8 172 75-255 65-240 (380)
105 cd07015 Clp_protease_NfeD Nodu 98.6 9.1E-07 2E-11 79.7 13.2 139 90-255 9-165 (172)
106 cd07013 S14_ClpP Caseinolytic 98.6 5.1E-07 1.1E-11 80.7 11.3 136 91-252 9-162 (162)
107 PRK10949 protease 4; Provision 98.5 3.1E-06 6.6E-11 90.6 16.5 163 74-264 325-538 (618)
108 PRK00277 clpP ATP-dependent Cl 98.4 1.6E-06 3.4E-11 80.3 10.5 139 89-255 38-196 (200)
109 PRK12553 ATP-dependent Clp pro 98.3 1E-05 2.2E-10 75.3 12.2 139 89-255 42-202 (207)
110 PRK12319 acetyl-CoA carboxylas 98.3 0.00027 5.8E-09 67.7 21.6 139 88-255 76-214 (256)
111 cd07017 S14_ClpP_2 Caseinolyti 98.2 9.4E-06 2E-10 73.2 10.9 136 91-252 18-171 (171)
112 CHL00198 accA acetyl-CoA carbo 98.2 0.00022 4.7E-09 70.0 20.9 139 88-255 132-270 (322)
113 TIGR00513 accA acetyl-CoA carb 98.2 0.00041 8.8E-09 68.1 21.0 139 88-255 129-267 (316)
114 PRK14512 ATP-dependent Clp pro 98.1 4.3E-05 9.4E-10 70.5 12.6 139 91-255 32-188 (197)
115 PLN03230 acetyl-coenzyme A car 98.1 0.00077 1.7E-08 68.0 21.8 138 89-255 200-337 (431)
116 PRK05724 acetyl-CoA carboxylas 98.1 0.00076 1.7E-08 66.3 20.8 139 88-255 129-267 (319)
117 PRK11778 putative inner membra 98.1 2.8E-05 6.1E-10 76.8 10.8 155 74-258 89-289 (330)
118 CHL00028 clpP ATP-dependent Cl 98.1 5.6E-05 1.2E-09 69.8 12.1 140 89-256 37-197 (200)
119 PF00574 CLP_protease: Clp pro 98.1 8.6E-06 1.9E-10 74.1 6.7 137 91-255 25-181 (182)
120 PLN03229 acetyl-coenzyme A car 98.0 0.001 2.3E-08 71.1 22.8 139 88-255 220-358 (762)
121 COG0616 SppA Periplasmic serin 98.0 7.7E-05 1.7E-09 73.9 12.4 136 96-257 82-264 (317)
122 TIGR00493 clpP ATP-dependent C 98.0 0.00012 2.5E-09 67.3 12.4 140 89-254 33-190 (191)
123 PF01972 SDH_sah: Serine dehyd 98.0 0.00021 4.5E-09 68.2 14.2 110 74-214 58-167 (285)
124 TIGR03133 malonate_beta malona 97.8 0.0011 2.3E-08 64.1 16.9 152 77-257 61-219 (274)
125 PRK12551 ATP-dependent Clp pro 97.8 0.00029 6.3E-09 64.9 12.1 139 90-256 33-191 (196)
126 PRK14514 ATP-dependent Clp pro 97.8 0.00036 7.8E-09 65.3 11.9 139 89-255 61-219 (221)
127 PRK14513 ATP-dependent Clp pro 97.7 0.00047 1E-08 63.7 12.5 139 89-257 34-194 (201)
128 PRK07189 malonate decarboxylas 97.5 0.0022 4.8E-08 62.7 13.7 153 76-257 69-228 (301)
129 PRK05654 acetyl-CoA carboxylas 97.4 0.0062 1.4E-07 59.5 16.0 156 74-265 119-276 (292)
130 TIGR00515 accD acetyl-CoA carb 97.4 0.008 1.7E-07 58.5 15.9 153 77-265 122-275 (285)
131 TIGR03134 malonate_gamma malon 97.3 0.014 2.9E-07 55.5 16.2 156 74-258 30-192 (238)
132 CHL00174 accD acetyl-CoA carbo 97.3 0.0068 1.5E-07 59.0 14.3 153 77-265 135-289 (296)
133 PRK12552 ATP-dependent Clp pro 97.2 0.0079 1.7E-07 56.4 12.9 143 90-256 48-215 (222)
134 PF01343 Peptidase_S49: Peptid 97.2 0.00024 5.2E-09 62.9 2.6 99 161-260 2-145 (154)
135 COG1030 NfeD Membrane-bound se 97.1 0.0088 1.9E-07 60.8 13.4 150 74-255 25-188 (436)
136 TIGR00705 SppA_67K signal pept 97.1 0.0068 1.5E-07 65.0 13.3 84 95-200 77-160 (584)
137 COG0740 ClpP Protease subunit 96.7 0.026 5.6E-07 51.9 12.1 98 158-257 78-194 (200)
138 TIGR01117 mmdA methylmalonyl-C 96.7 0.054 1.2E-06 57.2 16.3 155 80-260 319-486 (512)
139 PLN02820 3-methylcrotonyl-CoA 95.8 0.2 4.4E-06 53.5 14.6 110 77-200 131-241 (569)
140 PF01039 Carboxyl_trans: Carbo 95.7 0.097 2.1E-06 55.1 11.6 141 77-257 59-207 (493)
141 TIGR01117 mmdA methylmalonyl-C 95.7 0.13 2.7E-06 54.5 12.2 106 77-200 84-190 (512)
142 COG0825 AccA Acetyl-CoA carbox 95.6 0.02 4.3E-07 55.1 5.1 88 156-255 179-266 (317)
143 COG0777 AccD Acetyl-CoA carbox 95.4 0.71 1.5E-05 44.3 14.9 151 77-263 124-275 (294)
144 PRK10949 protease 4; Provision 94.9 0.16 3.4E-06 54.9 10.1 84 95-200 96-179 (618)
145 PLN02820 3-methylcrotonyl-CoA 91.5 6.7 0.00014 42.1 15.6 146 89-259 380-544 (569)
146 PLN02157 3-hydroxyisobutyryl-C 91.2 0.41 8.8E-06 49.1 5.9 65 336-410 228-293 (401)
147 COG4799 Acetyl-CoA carboxylase 91.0 0.98 2.1E-05 47.5 8.6 101 78-196 94-194 (526)
148 PF01039 Carboxyl_trans: Carbo 81.7 5.8 0.00013 41.9 8.3 156 80-260 298-469 (493)
149 COG0074 SucD Succinyl-CoA synt 79.7 5.9 0.00013 38.4 6.8 52 100-177 189-240 (293)
150 PF02601 Exonuc_VII_L: Exonucl 79.0 3.7 7.9E-05 40.6 5.5 79 94-197 55-137 (319)
151 TIGR00237 xseA exodeoxyribonuc 77.7 3.9 8.5E-05 42.4 5.4 79 93-196 169-248 (432)
152 KOG0840 ATP-dependent Clp prot 74.3 19 0.00041 34.5 8.4 134 90-254 100-256 (275)
153 COG1570 XseA Exonuclease VII, 69.8 9.4 0.0002 39.4 5.7 76 95-195 177-253 (440)
154 PRK00286 xseA exodeoxyribonucl 69.3 7.2 0.00016 40.4 5.0 77 94-196 176-253 (438)
155 KOG0540 3-Methylcrotonyl-CoA c 67.8 39 0.00084 35.0 9.5 150 80-259 353-511 (536)
156 COG4799 Acetyl-CoA carboxylase 66.9 48 0.001 35.2 10.3 160 77-258 326-497 (526)
157 PF13607 Succ_CoA_lig: Succiny 65.2 15 0.00033 31.8 5.4 52 98-176 41-92 (138)
158 PTZ00187 succinyl-CoA syntheta 58.9 19 0.00041 35.8 5.4 15 163-177 250-264 (317)
159 PLN02522 ATP citrate (pro-S)-l 56.4 29 0.00062 37.6 6.7 14 164-177 249-262 (608)
160 smart00250 PLEC Plectin repeat 41.1 22 0.00047 23.3 1.9 19 232-251 17-35 (38)
161 PRK05678 succinyl-CoA syntheta 38.7 58 0.0012 31.9 5.2 14 164-177 226-239 (291)
162 TIGR01019 sucCoAalpha succinyl 37.3 59 0.0013 31.8 5.1 14 164-177 224-237 (286)
163 COG3660 Predicted nucleoside-d 33.4 2.1E+02 0.0046 27.9 7.8 117 78-197 130-255 (329)
164 PF09905 DUF2132: Uncharacteri 33.3 57 0.0012 24.3 3.1 29 304-341 34-62 (64)
165 COG4565 CitB Response regulato 31.7 2.4E+02 0.0053 26.4 7.7 58 208-266 56-115 (224)
166 TIGR02717 AcCoA-syn-alpha acet 31.5 41 0.00088 35.0 3.1 83 98-208 190-272 (447)
167 PF00549 Ligase_CoA: CoA-ligas 31.3 1.3E+02 0.0029 26.4 5.9 24 98-121 60-83 (153)
168 PRK06091 membrane protein FdrA 30.5 1.1E+02 0.0023 32.9 5.9 52 126-177 235-291 (555)
169 cd03572 ENTH_epsin_related ENT 28.7 3.6E+02 0.0079 22.8 11.0 92 296-387 20-116 (122)
170 PLN00049 carboxyl-terminal pro 27.1 20 0.00043 36.6 -0.2 101 75-186 194-300 (389)
171 PF00681 Plectin: Plectin repe 26.1 23 0.00051 24.2 0.1 19 232-251 17-35 (45)
172 COG0793 Prc Periplasmic protea 25.4 54 0.0012 33.7 2.6 97 77-186 205-308 (406)
173 PF11251 DUF3050: Protein of u 24.9 3.4E+02 0.0073 25.7 7.5 63 292-354 79-149 (232)
174 PLN00125 Succinyl-CoA ligase [ 24.4 1.6E+02 0.0036 28.9 5.7 14 164-177 232-245 (300)
175 smart00870 Asparaginase Aspara 22.8 2.5E+02 0.0055 27.8 6.8 31 89-119 55-85 (323)
176 PF06258 Mito_fiss_Elm1: Mitoc 22.1 3.7E+02 0.0081 26.5 7.8 116 88-203 122-245 (311)
177 PF03464 eRF1_2: eRF1 domain 2 20.8 1.6E+02 0.0035 24.9 4.3 45 77-121 25-83 (133)
No 1
>PLN02851 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=1.1e-63 Score=501.88 Aligned_cols=326 Identities=33% Similarity=0.565 Sum_probs=282.1
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
.+.|.++. .+++++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|+| ++||+|+|++++...... ...
T Consensus 41 ~~~v~~e~-~~~~~~ItLNRP~~lNALs~~m~~eL~~al~~~~~D~~vrvVVL~G~G-kaFcAGgDl~~l~~~~~~-~~~ 117 (407)
T PLN02851 41 QDQVLVEG-RAKSRAAILNRPSSLNALTIPMVARLKRLYESWEENPDIGFVLMKGSG-RAFCSGADVVSLYHLINE-GNV 117 (407)
T ss_pred CCCeEEEE-ECCEEEEEECCCCcCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCccCCcCHHHHHhhccc-cch
Confidence 45677776 789999999999999999999999999999999999999999999998 899999999998653211 111
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
.....++..++.+++.|.++|||+||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.
T Consensus 118 ~~~~~~f~~~~~l~~~i~~~pKPvIA~v~G~amGGG~gLal~~D~rVate~a~famPE~~iGl~PdvG~s~~L~rl~g~- 196 (407)
T PLN02851 118 EECKLFFENLYKFVYLQGTYLKPNVAIMDGITMGCGAGISIPGMFRVVTDKTVFAHPEVQMGFHPDAGASYYLSRLPGY- 196 (407)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEeeHHHHHHHhCCEEEEeCCceEecchhccCCCCCccHHHHHHHhcCH-
Confidence 2344577888889999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCC-CCcchhhhhHHHHH
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQIT 303 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i~ 303 (414)
.+++|+|||++++ |+||+++||++++||++++....+.+.+. . ..+...+...+++|.... +....+......|+
T Consensus 197 -~g~~L~LTG~~i~-a~eA~~~GLa~~~v~~~~l~~l~~~l~~~-~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~I~ 272 (407)
T PLN02851 197 -LGEYLALTGQKLN-GVEMIACGLATHYCLNARLPLIEERLGKL-L-TDDPAVIEDSLAQYGDLVYPDKSSVLHKIETID 272 (407)
T ss_pred -HHHHHHHhCCcCC-HHHHHHCCCceeecCHhhHHHHHHHHHhh-c-cCCHHHHHHHHHHhccccCCCcccHHHHHHHHH
Confidence 6999999999999 99999999999999999986554444433 2 234456888999997542 22344555688999
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+||+.+ ++++|+++|+.+.+. ...+|++++++.|.++||+|+++|+++++++. ..+|++++++|+++
T Consensus 273 ~~F~~~-sv~~I~~~L~~~~~~---~~~~wa~~~~~~l~~~SP~Sl~vt~~~~~~~~---------~~sl~e~l~~E~~l 339 (407)
T PLN02851 273 KCFGHD-TVEEIIEALENEAAS---SYDEWCKKALKKIKEASPLSLKVTLQSIREGR---------FQTLDQCLAREYRI 339 (407)
T ss_pred HHhCCC-CHHHHHHHHHhcccc---cchHHHHHHHHHHHhcCcHHHHHHHHHHHHHh---------cCCHHHHHHHHHHH
Confidence 999987 999999999975321 01589999999999999999999999999987 57999999999999
Q ss_pred HHHhC---CCchHHHHHHhhHhCCCCCCCCC
Q 015014 384 ALRSS---LRSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 384 ~~~~~---~~~D~~eGv~afl~dk~~~P~~~ 411 (414)
..+++ .++||.|||||.||||+++|+|-
T Consensus 340 ~~~~~~~~~~~DF~EGVRA~LIDKd~~P~W~ 370 (407)
T PLN02851 340 SLCGVSKWVSGDFCEGVRARLVDKDFAPKWD 370 (407)
T ss_pred HHHHHhcCccchHHHHHHHHhcCCCCCCCCC
Confidence 99987 58999999999999999999973
No 2
>KOG1684 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-64 Score=481.42 Aligned_cols=328 Identities=50% Similarity=0.773 Sum_probs=303.2
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
.+.|.++. ++...+||||||+++||||.+|+..+.-.|..|+.++.+++||+.|+|+++||||+|++...... .+...
T Consensus 37 ~~~VL~e~-~~~~r~itLNRPKaLNAlnleMv~~~~~~L~~we~s~~~k~vIlkgs~~raFCAGgDI~~~ae~~-~d~~~ 114 (401)
T KOG1684|consen 37 KDQVLVEG-KGCARVITLNRPKALNALNLEMVLSIYPKLVEWEKSPLVKLVILKGSGGRAFCAGGDIKAVAESI-KDKET 114 (401)
T ss_pred CCceEEec-CCceeEEEecCchhhccccHHHHHHHHHHHHhhccCCCceEEEEecCCCceeecCccHHHHHHHh-hcCCc
Confidence 45678876 78999999999999999999999999999999999999999999999889999999999766544 33445
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
+....+|..+|.+++.|.++.||+||.+||..||||++|+++.-||||||++.|+|||+.||++||+|++|+|+|++|
T Consensus 115 ~~~~~fF~~eYsl~~~igtY~KP~ValmdGITMGgG~GLS~hg~fRVATerT~~AmPEt~IGlfPDVG~Sy~lsrlpg-- 192 (401)
T KOG1684|consen 115 PEVKKFFTEEYSLNHLIGTYLKPYVALMDGITMGGGVGLSVHGRFRVATERTVFAMPETGIGLFPDVGASYFLSRLPG-- 192 (401)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCceEEEeeceeecCCcceeecceeEEeeccceecccccccccccCccceeehhhCcc--
Confidence 577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCc-chhhhhHHHHH
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGE-APLKLLLPQIT 303 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~i~ 303 (414)
..+.||.|||.+++ +.||+..||++|+||.+++....++|. ..+..+|...+.+.|.+|...+.++ ..+....+.|+
T Consensus 193 ~lg~YLgLTG~rl~-GaD~~~~GlATHyv~S~~l~~Lee~L~-~~l~~dp~~~I~~~l~~y~~~~~~~~~~~~~~~~~i~ 270 (401)
T KOG1684|consen 193 YLGLYLGLTGQRLS-GADALRCGLATHYVPSEKLPSLEERLL-KNLNDDPQSVINETLEKYASPAKDESFSLSLKLDVIN 270 (401)
T ss_pred HHHHhhhhccceec-chHHHHhcchhhccchhhhhHHHHHHh-hhcCCCcHHHHHHHHHHhcccCCCccccchhhHHHHH
Confidence 48999999999999 899999999999999999999999988 5778888899999999999886544 45567999999
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+||+.+ ||+||++.|++.++ ..++.+||++++++|.++||+|+++|.++++.+. ..++++++.+|+++
T Consensus 271 ~~Fs~~-tVeeIie~lk~~q~--~~~~~ewak~tlk~L~k~SPtSLkvT~r~i~egs---------~~tl~~~l~~Eyr~ 338 (401)
T KOG1684|consen 271 KCFSAN-TVEEIIEALKNYQQ--SADGSEWAKETLKTLKKMSPTSLKVTLRQIREGS---------KQTLDQCLTMEYRL 338 (401)
T ss_pred Hhhccc-cHHHHHHHHHHHhh--hhhHHHHHHHHHHHHhhcCCchHHHHHHHHHhhh---------HHHHHHHHHHHHHH
Confidence 999888 99999999988776 3345899999999999999999999999999987 67999999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
..+...++||.|||||.|+||+++|+|
T Consensus 339 s~~~~~~~DF~EGvRA~LIDKd~~PKW 365 (401)
T KOG1684|consen 339 SLRMLMRGDFCEGVRAVLIDKDQNPKW 365 (401)
T ss_pred HHHHhhccchhhhhhheeecCCcCCCC
Confidence 999999999999999999999999997
No 3
>PLN02988 3-hydroxyisobutyryl-CoA hydrolase
Probab=100.00 E-value=1.6e-63 Score=499.30 Aligned_cols=325 Identities=36% Similarity=0.603 Sum_probs=278.5
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCC
Q 015014 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (414)
Q Consensus 66 ~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (414)
..|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++|++|||+|.| ++||+|+|++++...... ....
T Consensus 9 ~~v~~~~-~~~i~~ItLnRP~~lNALs~~m~~~L~~al~~~~~d~~v~~VVl~G~G-~~FcAGgDl~~l~~~~~~-~~~~ 85 (381)
T PLN02988 9 SQVLVEE-KSSVRILTLNRPKQLNALSFHMISRLLQLFLAFEEDPSVKLVILKGHG-RAFCAGGDVAAVVRDIEQ-GNWR 85 (381)
T ss_pred CceEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCeeEEEEECCC-CCcccCcCHHHHHhhhcc-cchh
Confidence 3477775 799999999999999999999999999999999999999999999998 899999999998642211 1111
Q ss_pred chHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 146 LVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 146 ~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
....++...+.+...|.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.
T Consensus 86 ~~~~~f~~~~~l~~~i~~~pKPvIa~v~G~a~GGG~~Lal~~D~rvate~a~f~mPE~~iGl~Pd~G~s~~L~rl~G~-- 163 (381)
T PLN02988 86 LGANFFSDEYMLNYVMATYSKAQVSILNGIVMGGGAGVSVHGRFRIATENTVFAMPETALGLFPDVGASYFLSRLPGF-- 163 (381)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEecCeEeehhhHHhhcCCeEEEcCCcEEeChhhhcCcCCCccHHHHHHHHHHH--
Confidence 223356666777788999999999999999999999999999999999999999999999999999999999999993
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCC-CcchhhhhHHHHHh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE-GEAPLKLLLPQITS 304 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~i~~ 304 (414)
.+++|+|||++++ |+||+++|||+++||+++++..+.++++. .. .+...+...++.+...+. ...........|++
T Consensus 164 ~~~~l~LTG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~la~~-~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~ 240 (381)
T PLN02988 164 FGEYVGLTGARLD-GAEMLACGLATHFVPSTRLTALEADLCRI-GS-NDPTFASTILDAYTQHPRLKPQSAYHRLDVIDR 240 (381)
T ss_pred HHHHHHHcCCCCC-HHHHHHcCCceEecCHhHHHHHHHHHHHh-hc-cCHHHHHHHHHHhhcCCCCCCchHHHHHHHHHH
Confidence 7999999999999 99999999999999999999988888733 22 344446666776654432 12233346889999
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
||+.+ ++++|+++|+++.+.. ..+|++++++.|.++||+|+++|+++++++. ..++.+++++|+++.
T Consensus 241 ~f~~~-~~~~i~~~L~~~~~~~---~~~wa~~~~~~l~~~sP~sl~vt~~~~~~~~---------~~sl~e~~~~e~~~~ 307 (381)
T PLN02988 241 CFSRR-TVEEIISALEREATQE---ADGWISATIQALKKASPASLKISLRSIREGR---------LQGVGQCLIREYRMV 307 (381)
T ss_pred HhCCC-CHHHHHHHHHhhcccc---ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHH
Confidence 99987 9999999999852100 1589999999999999999999999999987 679999999999999
Q ss_pred HHhCC---CchHHHHHHhhHhCCCCCCCCC
Q 015014 385 LRSSL---RSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 385 ~~~~~---~~D~~eGv~afl~dk~~~P~~~ 411 (414)
.+++. ++||.|||||.||||+++|+|-
T Consensus 308 ~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~ 337 (381)
T PLN02988 308 CHVMKGEISKDFVEGCRAILVDKDKNPKWE 337 (381)
T ss_pred HHHHhcCCCchHHHhHHHHhcCCCCCCCCC
Confidence 99987 6999999999999999999973
No 4
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=8.6e-63 Score=495.66 Aligned_cols=326 Identities=31% Similarity=0.549 Sum_probs=275.1
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
.+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|+| ++||+|+|++++....... ..
T Consensus 36 ~~~V~~e~-~g~v~~ItLNRP~~lNALs~~m~~~L~~al~~~~~D~~vrvVVl~G~G-kaFcAGgDl~~l~~~~~~~-~~ 112 (401)
T PLN02157 36 DYQVLVEG-SGCSRTAILNRPPALNALTTHMGYRLQKLYKNWEEDPNIGFVMMKGSG-RAFCAGGDIVSLYHLRKRG-SP 112 (401)
T ss_pred CCceEEEE-ECCEEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CCccCCcCHHHHHhhcccc-ch
Confidence 34467776 789999999999999999999999999999999999999999999998 8999999999986532111 11
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
.....++...+.+++.|.++|||+||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|+|++| .
T Consensus 113 ~~~~~~~~~~~~l~~~i~~~pkPvIA~v~G~a~GGG~~Lal~cD~rvate~a~fa~PE~~iGl~Pd~G~s~~L~rl~G-~ 191 (401)
T PLN02157 113 DAIREFFSSLYSFIYLLGTYLKPHVAILNGVTMGGGTGVSIPGTFRVATDRTIFATPETIIGFHPDAGASFNLSHLPG-R 191 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCEEEEEeCeEeehhHHHHHhCCEEEEeCCCEEEChhhhcCCCCCccHHHHHHHhhh-H
Confidence 122346666677888999999999999999999999999999999999999999999999999999999999999999 3
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCC-CCCcchhhhhHHHHH
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSD-PEGEAPLKLLLPQIT 303 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~i~ 303 (414)
.+++|+|||++++ |+||+++|||+++||++++. .+.+++....... ...+....+.+... ......+......|+
T Consensus 192 -~a~~L~LTG~~i~-A~eA~~~GLv~~vVp~~~l~-~~~~~~~~i~~~~-p~av~~~k~~~~~~~~~~~~~l~~~~~~i~ 267 (401)
T PLN02157 192 -LGEYLGLTGLKLS-GAEMLACGLATHYIRSEEIP-VMEEQLKKLLTDD-PSVVESCLEKCAEVAHPEKTGVIRRIDLLE 267 (401)
T ss_pred -HHHHHHHcCCcCC-HHHHHHcCCceEEeCHhHHH-HHHHHHHHHHcCC-HHHHHHHHHHHhcccCCcchhHHHHHHHHH
Confidence 7999999999999 99999999999999999985 4456665544433 33344444444322 222344555678999
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+||+.+ +++||+++|+.+.++.. .+|++++++.|.++||+|+++|+++++++. ..+|++++++|+++
T Consensus 268 ~~f~~~-d~~ei~~al~~~~~kr~---~~wa~~~~~~l~~~sP~Sl~vt~~~~~~~~---------~~~l~e~~~~e~~~ 334 (401)
T PLN02157 268 KCFSHD-TVEEIIDSLEIEAGRRK---DTWCITTLRRLKESSPLSLKVALRSIREGR---------LQTLDQCLIREYRM 334 (401)
T ss_pred HHhcCC-CHHHHHHHHHhhhcccc---hHHHHHHHHHHHhcCcHHHHHHHHHHHHhh---------cCCHHHHHHHHHHH
Confidence 999977 99999999986532211 589999999999999999999999999987 56999999999999
Q ss_pred HHHhCC---CchHHHHHHhhHhCCCCCCCCC
Q 015014 384 ALRSSL---RSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 384 ~~~~~~---~~D~~eGv~afl~dk~~~P~~~ 411 (414)
..+++. ++||.|||||.||||+++|+|-
T Consensus 335 ~~~~~~~~~~~DF~EGVRA~LiDKd~~P~W~ 365 (401)
T PLN02157 335 SLQGLIGPMSGNFCEGVRARLIDKDEAPKWD 365 (401)
T ss_pred HHHHHhcCCCchHHHHHHHHHcCCCCCCCCC
Confidence 999885 6999999999999999999973
No 5
>PLN02874 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=100.00 E-value=6e-60 Score=475.11 Aligned_cols=325 Identities=33% Similarity=0.571 Sum_probs=278.6
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
+++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||+|.| ++||+|+|++++..... .
T Consensus 9 ~~~~v~~~~-~~~v~~ItLnrP~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~g~g-~~FcaG~Dl~~~~~~~~---~ 83 (379)
T PLN02874 9 AEEVVLGEE-KGRVRVITLNRPRQLNVISLSVVSLLAEFLEQWEKDDSVELIIIKGAG-RAFSAGGDLKMFYDGRE---S 83 (379)
T ss_pred CCCceEEEE-ECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CCccCccCHHHHHhhcc---c
Confidence 456677876 799999999999999999999999999999999999999999999997 89999999998754210 1
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
......++...+.+...|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|
T Consensus 84 ~~~~~~~~~~~~~l~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~iGl~p~~g~~~~L~rl~g- 162 (379)
T PLN02874 84 DDSCLEVVYRMYWLCYHIHTYKKTQVALVHGLVMGGGAGLMVPMKFRVVTEKTVFATPEASVGFHTDCGFSYILSRLPG- 162 (379)
T ss_pred chHHHHHHHHHHHHHHHHHhCCCCEEEEecCeEEecHHHHHHhCCeEEEeCCeEEeccccccCcCCChhHHHHHHhhhH-
Confidence 1112223444456677899999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCC-CCcchhhhhHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDP-EGEAPLKLLLPQI 302 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~i 302 (414)
. ++++|+|||++++ |+||+++|||+++||++++.+.+.++.+. ...+...+++++++|.... ..........+.|
T Consensus 163 ~-~a~~l~ltG~~i~-a~eA~~~GLv~~vv~~~~l~~~~~~l~~l--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i 238 (379)
T PLN02874 163 H-LGEYLALTGARLN-GKEMVACGLATHFVPSEKLPELEKRLLNL--NSGDESAVQEAIEEFSKDVQADEDSILNKQSWI 238 (379)
T ss_pred H-HHHHHHHcCCccc-HHHHHHcCCccEEeCHHHHHHHHHHHHhc--CCCCHHHHHHHHHHhhcccCCCcchhHHHHHHH
Confidence 4 7999999999999 99999999999999998887755555433 2344577899999887543 3344555668999
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
.+||+.+ ++.+|+++|+++.+... .+||.+++++|+++||+|++++|++++++. ..+++++++.|++
T Consensus 239 ~~~f~~~-~~~eii~al~~~~~~~~---~~~A~~~a~~l~~~sP~al~~tk~~~~~~~---------~~~l~~~l~~e~~ 305 (379)
T PLN02874 239 NECFSKD-TVEEIIKAFESEASKTG---NEWIKETLKGLRRSSPTGLKITLRSIREGR---------KQSLAECLKKEFR 305 (379)
T ss_pred HHHhCCC-CHHHHHHHHhhcccccc---cHHHHHHHHHHHhcChHHHHHHHHHHHHhc---------cCCHHHHHHHHHH
Confidence 9999987 99999999998643222 589999999999999999999999999876 5689999999999
Q ss_pred HHHHhCC---CchHHHHHHhhHhCCCCCCCCC
Q 015014 383 VALRSSL---RSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 383 ~~~~~~~---~~D~~eGv~afl~dk~~~P~~~ 411 (414)
.....+. ++||+|||+||++||+++|+|-
T Consensus 306 ~~~~~~~~~~~~D~~EGv~AflidK~r~P~w~ 337 (379)
T PLN02874 306 LTMNILRSTVSDDVYEGIRALVIDKDNAPKWN 337 (379)
T ss_pred HHHHHHhcCcCcchhhccceEEEcCCCCCCCC
Confidence 9888777 9999999999999999999873
No 6
>PRK05617 3-hydroxyisobutyryl-CoA hydrolase; Provisional
Probab=100.00 E-value=1e-59 Score=467.96 Aligned_cols=320 Identities=41% Similarity=0.685 Sum_probs=281.4
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++..... ......
T Consensus 4 ~v~~~~-~~~v~~itLnrP~~~Nal~~~m~~~L~~~l~~~~~d~~vrvvVltg~g~~~F~aG~Dl~~~~~~~~-~~~~~~ 81 (342)
T PRK05617 4 EVLAEV-EGGVGVITLNRPKALNALSLEMIRAIDAALDAWEDDDAVAAVVIEGAGERGFCAGGDIRALYEAAR-AGDPLA 81 (342)
T ss_pred eEEEEE-ECCEEEEEECCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEcCCCCceeCCcCHHHHHhhhc-cCCchh
Confidence 467775 799999999999999999999999999999999999999999999998789999999998754221 111111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...++...+.++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++| . +
T Consensus 82 ~~~~~~~~~~~~~~i~~~~kPvIAaVnG~a~GgG~~LalacD~ria~~~a~f~~pe~~lGl~P~~g~~~~L~r~~g-~-~ 159 (342)
T PRK05617 82 ADRFFREEYRLNALIARYPKPYIALMDGIVMGGGVGISAHGSHRIVTERTKMAMPETGIGFFPDVGGTYFLSRAPG-A-L 159 (342)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEEccHhHHhhhCCEEEEcCCCEeeCCccccCcCCCccceeEehhccc-H-H
Confidence 1134445556778899999999999999999999999999999999999999999999999999999999999977 5 8
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||+.++ |+||+++|||++++|++++.....++++..+ .+..+.++..+.+|....+. ..+......|++||
T Consensus 160 a~~llltG~~i~-A~eA~~~GLv~~vv~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~ 236 (342)
T PRK05617 160 GTYLALTGARIS-AADALYAGLADHFVPSADLPALLDALISLRW-DSGADVVDAALAAFATPAPA-SELAAQRAWIDECF 236 (342)
T ss_pred HHHHHHcCCCCC-HHHHHHcCCcceecCHHHHHHHHHHHHhcCC-ccchhHHHHHHHHhccCCCc-chhHHHHHHHHHHh
Confidence 999999999999 9999999999999999988876666665533 44556788899998877544 47888999999999
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
+.. ++++|+++|+++. .+|+.+++++|+++||.+++.+|+++++.. ..+++++++.|.+.+..
T Consensus 237 ~~~-~~~~~~~~l~~~~-------~~~a~~~a~~i~~~sp~a~~~~k~~l~~~~---------~~~l~~~~~~e~~~~~~ 299 (342)
T PRK05617 237 AGD-TVEDIIAALEADG-------GEFAAKTADTLRSRSPTSLKVTLEQLRRAR---------GLTLEECLRRELRLALA 299 (342)
T ss_pred CCC-CHHHHHHHHHhcc-------HHHHHHHHHHHHhCCcHHHHHHHHHHHHhc---------CCCHHHHHHHHHHHHHH
Confidence 986 9999999999996 589999999999999999999999999876 56899999999999999
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+.++|++|||++|+++|+|+|+|
T Consensus 300 ~~~~~d~~egv~afl~ek~r~p~~ 323 (342)
T PRK05617 300 MLRSPDFVEGVRAVLIDKDRNPKW 323 (342)
T ss_pred HHhCCchhhccceEEEcCCCCCCC
Confidence 999999999999998777788887
No 7
>KOG1680 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=1.5e-55 Score=409.57 Aligned_cols=256 Identities=25% Similarity=0.334 Sum_probs=224.1
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
+..+.....+++|+.|+||||+++|+|+..|+.+|.+++..++.|+++.++||||.| ++||+|+||+++......+..
T Consensus 35 ~~~~~~~~~d~~I~lItlNRP~~~Nal~~~~m~eL~~A~~~~e~D~s~~viVltG~g-ksFcsG~Dl~e~~~~~~~~~~- 112 (290)
T KOG1680|consen 35 PIKIELVGEDNGIALITLNRPKALNALCRATMLELAEAFKDFESDDSVGVIVLTGSG-KSFCSGADLKEMKKDEFQDVS- 112 (290)
T ss_pred cceeEEeecCCCeEEEEeCChHHhccccHHHHHHHHHHHHHhhccCcccEEEEEcCC-CccccccCHHHHhhccccccc-
Confidence 333444444789999999999999999999999999999999999999999999998 999999999998864322211
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
...+.. .+..+.+.+||+||+|||+|+|||++|+++||+|||+++|+|++|+.++|++|.+|||++|+|.+|++
T Consensus 113 ---~~~~~~---~~~~~~~~~KPvIaainG~AlgGG~ELalmCDirva~~~Akfg~~~~~~Gi~p~~GGT~rl~r~vG~s 186 (290)
T KOG1680|consen 113 ---DGIFLR---VWDLVSRLKKPVIAAINGFALGGGLELALMCDIRVAGEGAKFGFFEIRMGIIPSWGGTQRLPRIVGKS 186 (290)
T ss_pred ---cccccc---hhhhhhhcccceeEeeeceeeccchhhhhhcceEeccCCCeecccccccCCccCCCchhhHHHHhChH
Confidence 112222 22334489999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
+|+++++||++++ |+||+++|||++|||.+++...+..|
T Consensus 187 -~Ale~~ltg~~~~-AqeA~~~GlVn~Vvp~~~~l~eAv~l--------------------------------------- 225 (290)
T KOG1680|consen 187 -RALEMILTGRRLG-AQEAKKIGLVNKVVPSGDALGEAVKL--------------------------------------- 225 (290)
T ss_pred -HHHHHHHhcCccc-HHHHHhCCceeEeecchhHHHHHHHH---------------------------------------
Confidence 9999999999999 99999999999999999876544433
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
++ +|+++||..++..|+.++.+. ..++.+.++.|.+.+
T Consensus 226 -----------------------------~~----~Ia~~~~~~v~~~K~svn~~~---------e~~l~e~l~~e~~~~ 263 (290)
T KOG1680|consen 226 -----------------------------AE----QIAKNSPLVVRADKESVNAAY---------ETTLFEGLELERDLF 263 (290)
T ss_pred -----------------------------HH----HHHhCCHHHHHHHHHHHHHHh---------hccHHHHHHhhhhhh
Confidence 33 599999999999999999976 678999999999999
Q ss_pred HHhCCCchHHHHHHhhHhCCCCCCCCCcC
Q 015014 385 LRSSLRSDFAEGVRAVLVDKDQVLSQLKL 413 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk~~~P~~~~~ 413 (414)
...+..+|.+|||.+|. ++|+|+|-|.
T Consensus 264 ~s~~~~~d~~Eg~~~f~--~kr~~~~~k~ 290 (290)
T KOG1680|consen 264 GSTFATEDRLEGMTAFA--EKRKPKFSKK 290 (290)
T ss_pred hhhhhhHHHHHHHHHhc--ccCCcccccC
Confidence 99999999999999998 7888888663
No 8
>PRK05980 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-54 Score=413.63 Aligned_cols=257 Identities=25% Similarity=0.342 Sum_probs=226.1
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.|.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++..... ......
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~~-~~~~~~ 81 (260)
T PRK05980 4 TVLIEI-RDGIALLTLNRPEKLNALNYALIDRLLARLDAIEVDESVRAVILTGAGDRAFSAGADIHEFSASVA-AGADVA 81 (260)
T ss_pred eEEEEE-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEEeCCCCceEcCcCHHHHhhhcc-ccchhh
Confidence 477775 799999999999999999999999999999999999999999999998679999999998754211 011112
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...++.....++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 82 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 160 (260)
T PRK05980 82 LRDFVRRGQAMTARLEAFPKPVIAAVNGLAFGGGCEITEAVHLAIASERALFAKPEIRLGMPPTFGGTQRLPRLAGRK-R 160 (260)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCEEEhhhhHHhHhCCEEEecCCCEecCcccccCCCCCchHhhHHHhhcCHH-H
Confidence 233444455677889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++||||++||++++.+.+.+++
T Consensus 161 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a---------------------------------------- 199 (260)
T PRK05980 161 ALELLLTGDAFS-AERALEIGLVNAVVPHEELLPAARALA---------------------------------------- 199 (260)
T ss_pred HHHHHHcCCccC-HHHHHHcCCCCcccCHHHHHHHHHHHH----------------------------------------
Confidence 999999999999 999999999999999887765444433
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
++|++.||.+++.+|+.++... ..++.++++.|...+..
T Consensus 200 --------------------------------~~la~~~p~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~ 238 (260)
T PRK05980 200 --------------------------------RRIIRHSPVAVAAILTAVTRGL---------NLSIAEGLLIESEQFAR 238 (260)
T ss_pred --------------------------------HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 3489999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+.++|++||+.+|+ ++++|+|
T Consensus 239 ~~~~~~~~e~~~af~--~kr~p~~ 260 (260)
T PRK05980 239 MAGSADLREGLAAWI--ERRRPAY 260 (260)
T ss_pred HhcChhHHHHHHHHh--ccCCCCC
Confidence 999999999999999 6777875
No 9
>PRK05862 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.2e-54 Score=410.50 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=223.6
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.++.+.++. +++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~------ 73 (257)
T PRK05862 2 AYETILVET-RGRVGLITLNRPKALNALNDALMDELGAALAAFDADEGIGAIVITGSE-KAFAAGADIKEMADL------ 73 (257)
T ss_pred CCceEEEEe-eCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CceECCcChHhHhcc------
Confidence 345677876 789999999999999999999999999999999999999999999997 899999999987531
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
+....+......++.+|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 74 -~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 152 (257)
T PRK05862 74 -SFMDVYKGDYITNWEKVARIRKPVIAAVAGYALGGGCELAMMCDIIIAADTAKFGQPEIKLGVLPGMGGSQRLTRAVGK 152 (257)
T ss_pred -chhHHHHHHHHHHHHHHHhCCCCEEEEEccEEeHHHHHHHHHCCEEEEeCCCEEeCchhccCcCCCccHHHHHHHHhCH
Confidence 1111122333456678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++||||+++|++++.+.+.++++
T Consensus 153 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------ 194 (257)
T PRK05862 153 A-KAMDLCLTGRMMD-AAEAERAGLVSRVVPADKLLDEALAAAT------------------------------------ 194 (257)
T ss_pred H-HHHHHHHhCCccC-HHHHHHcCCCCEeeCHhHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999998887655444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|++.||.+++.+|++++... ..++.++++.|.+.
T Consensus 195 ------------------------------------~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~ 229 (257)
T PRK05862 195 ------------------------------------TIASFSLPAVMMAKEAVNRAY---------ETTLAEGLLFERRL 229 (257)
T ss_pred ------------------------------------HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHH
Confidence 488999999999999999876 56899999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+...+.++|++||+++|+ ++++|.|
T Consensus 230 ~~~~~~s~~~~e~i~af~--~kr~p~~ 254 (257)
T PRK05862 230 FHSLFATEDQKEGMAAFV--EKRKPVF 254 (257)
T ss_pred HHHHhcChhHHHHHHHHh--ccCCCCC
Confidence 999999999999999999 6667765
No 10
>PRK09076 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.4e-53 Score=409.36 Aligned_cols=252 Identities=22% Similarity=0.284 Sum_probs=222.6
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++. +++|++||||||++ |++|.+|+.+|.++++.+++|+++|+|||+|.|+++||+|+|++++... +...
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~-Nal~~~~~~~l~~al~~~~~d~~vrvvVl~g~g~~~F~aG~Dl~~~~~~-----~~~~ 76 (258)
T PRK09076 4 ELDLEI-DGHVAILTLNNPPA-NTWTADSLQALKQLVLELNADKDVYALVITGDGEKFFSAGADLNLFADG-----DKAV 76 (258)
T ss_pred EEEEEE-ECCEEEEEECCCCc-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCCCCceEeCcCHHHHhhc-----Chhh
Confidence 477776 78999999999986 9999999999999999999999999999999987799999999987531 1111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...+......++.++.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~ 155 (258)
T PRK09076 77 AREMARRFGEAFEALSAFRGVSIAAINGYAMGGGLECALACDIRIAEEQAQMALPEASVGLLPCAGGTQNLPWLVGEG-W 155 (258)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEecCCCEeeCcccccCCCCCccHHHHHHHHhCHH-H
Confidence 122333445677889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||+.++ |+||+++|||++|||++++.+.+.+++
T Consensus 156 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a---------------------------------------- 194 (258)
T PRK09076 156 AKRMILCGERVD-AATALRIGLVEEVVEKGEAREAALALA---------------------------------------- 194 (258)
T ss_pred HHHHHHcCCcCC-HHHHHHCCCCceecCchhHHHHHHHHH----------------------------------------
Confidence 999999999999 999999999999999987765444433
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
++|++.||.+++.+|++++... ..++++.++.|...+..
T Consensus 195 --------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 233 (258)
T PRK09076 195 --------------------------------QKVANQSPSAVAACKTLIQAAR---------NGPRAAALALERELFVD 233 (258)
T ss_pred --------------------------------HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 3599999999999999999875 56799999999999999
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
++.++|++||+++|+ ++++|+|
T Consensus 234 ~~~~~~~~eg~~af~--~kr~p~~ 255 (258)
T PRK09076 234 LFDTEDQREGVNAFL--EKRAPQW 255 (258)
T ss_pred HhcCchHHHHHHHHh--cCCCCCC
Confidence 999999999999999 6677775
No 11
>PRK05809 3-hydroxybutyryl-CoA dehydratase; Validated
Probab=100.00 E-value=1.1e-53 Score=410.55 Aligned_cols=257 Identities=26% Similarity=0.310 Sum_probs=226.9
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
|+++.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++....
T Consensus 1 ~~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~v~~vvl~g~g~~~F~aG~Dl~~~~~~~---- 75 (260)
T PRK05809 1 MELKNVILEK-EGHIAVVTINRPKALNALNSETLKELDTVLDDIENDDNVYAVILTGAGEKAFVAGADISEMKDLN---- 75 (260)
T ss_pred CCcceEEEEE-eCCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEcCCCCceeeCcChHhHhccC----
Confidence 4567788886 78999999999999999999999999999999999999999999999768999999999875411
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
......+......++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|
T Consensus 76 -~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~va~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 154 (260)
T PRK05809 76 -EEEGRKFGLLGNKVFRKLENLDKPVIAAINGFALGGGCELSMACDIRIASEKAKFGQPEVGLGITPGFGGTQRLARIVG 154 (260)
T ss_pred -hHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeecHHHHHHHhCCEEEeeCCCEEeCcccccCCCCCccHHHHHHHHhC
Confidence 1111223333456777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||+.++ |+||+++|||++++|++++.+.+.+++
T Consensus 155 ~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------ 196 (260)
T PRK05809 155 PG-KAKELIYTGDMIN-AEEALRIGLVNKVVEPEKLMEEAKALA------------------------------------ 196 (260)
T ss_pred HH-HHHHHHHhCCCCC-HHHHHHcCCCCcccChHHHHHHHHHHH------------------------------------
Confidence 98 9999999999999 999999999999999887755443333
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
++|++.||.+++.+|+.+++.. ..++.++++.|.+
T Consensus 197 ------------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~ 231 (260)
T PRK05809 197 ------------------------------------NKIAANAPIAVKLCKDAINRGM---------QVDIDTAVAIEAE 231 (260)
T ss_pred ------------------------------------HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHH
Confidence 3589999999999999999876 5679999999999
Q ss_pred HHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 383 VALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 383 ~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+..++.++|++||+++|+ ++++|+|
T Consensus 232 ~~~~~~~~~~~~egi~af~--~~r~p~~ 257 (260)
T PRK05809 232 DFGECFSTEDQTEGMTAFV--EKREKNF 257 (260)
T ss_pred HHHHHhcCHHHHHHHHHHh--cCCCCCC
Confidence 9999999999999999999 6677775
No 12
>PRK06127 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-53 Score=411.22 Aligned_cols=258 Identities=22% Similarity=0.260 Sum_probs=227.4
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
+.+.|.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++.... ..
T Consensus 9 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~---~~ 84 (269)
T PRK06127 9 PTGKLLAEK-TGGLGRITFNNPARHNAMSLDMWEALPQALAAAEDDDAIRVVVLTGAGEKAFVSGADISQFEESR---SD 84 (269)
T ss_pred CCCceEEEE-ECCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecCcCHHHHhhcc---cc
Confidence 456688886 78999999999999999999999999999999999999999999999867999999999875321 11
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
.+....+......++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 85 ~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~LalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 164 (269)
T PRK06127 85 AEAVAAYEQAVEAAQAALADYAKPTIACIRGYCIGGGMGIALACDIRIAAEDSRFGIPAARLGLGYGYDGVKNLVDLVGP 164 (269)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEeeCCCEeeCchhhhCCCCCccHHHHHHHHhCH
Confidence 11122344445567788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++|||++|||++++.+.+.++++
T Consensus 165 ~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------ 206 (269)
T PRK06127 165 S-AAKDLFYTARRFD-AAEALRIGLVHRVTAADDLETALADYAA------------------------------------ 206 (269)
T ss_pred H-HHHHHHHcCCCCC-HHHHHHcCCCCEeeCHHHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999998887665544433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|++.||.+++.+|++++... ..++++.++.|...
T Consensus 207 ------------------------------------~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~ 241 (269)
T PRK06127 207 ------------------------------------TIAGNAPLTLRAAKRAIAELL---------KDEPERDMAACQAL 241 (269)
T ss_pred ------------------------------------HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHH
Confidence 488999999999999999876 56799999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+..++.++|++||+.+|+ ++++|+|
T Consensus 242 ~~~~~~~~d~~e~~~af~--ekr~p~~ 266 (269)
T PRK06127 242 VAACFDSEDYREGRAAFM--EKRKPVF 266 (269)
T ss_pred HHHHhcChHHHHHHHHHh--cCCCCCC
Confidence 999999999999999999 6677775
No 13
>PLN02600 enoyl-CoA hydratase
Probab=100.00 E-value=1.3e-53 Score=408.04 Aligned_cols=247 Identities=23% Similarity=0.347 Sum_probs=220.7
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHH
Q 015014 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTA 153 (414)
Q Consensus 74 ~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (414)
+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++... .......+...
T Consensus 2 ~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~~d~~vr~vVl~g~~g~~F~aG~Dl~~~~~~-----~~~~~~~~~~~ 76 (251)
T PLN02600 2 DSGIVELRLDRPEAKNAIGKEMLRGLRSAFEKIQADASARVVMLRSSVPGVFCAGADLKERRKM-----SPSEVQKFVNS 76 (251)
T ss_pred CCcEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceeeCcCHHHHhcc-----ChHHHHHHHHH
Confidence 5889999999999999999999999999999999999999999999866899999999987531 11122334444
Q ss_pred HHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhc
Q 015014 154 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 233 (414)
Q Consensus 154 ~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~lt 233 (414)
...++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. ++++|++|
T Consensus 77 ~~~~~~~l~~~~kPvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~G~~-~a~~l~lt 155 (251)
T PLN02600 77 LRSTFSSLEALSIPTIAVVEGAALGGGLELALSCDLRICGEEAVFGLPETGLAIIPGAGGTQRLPRLVGRS-RAKELIFT 155 (251)
T ss_pred HHHHHHHHHhCCCCEEEEecCeecchhHHHHHhCCEEEeeCCCEEeCcccccCcCCCchHHHHHHHHhCHH-HHHHHHHh
Confidence 55677889999999999999999999999999999999999999999999999999999999999999998 99999999
Q ss_pred CCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCcccHH
Q 015014 234 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 313 (414)
Q Consensus 234 G~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~sv~ 313 (414)
|+.++ |+||+++||||++||++++.+.+.+++
T Consensus 156 g~~~~-a~eA~~~Glv~~vv~~~~~~~~a~~~a----------------------------------------------- 187 (251)
T PLN02600 156 GRRIG-AREAASMGLVNYCVPAGEAYEKALELA----------------------------------------------- 187 (251)
T ss_pred CCccC-HHHHHHcCCCcEeeChhHHHHHHHHHH-----------------------------------------------
Confidence 99999 999999999999999888765443333
Q ss_pred HHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCCCchH
Q 015014 314 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 393 (414)
Q Consensus 314 ~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~D~ 393 (414)
++|++.||.+++.+|++++... ..++.+.++.|.+.+..++.++|+
T Consensus 188 -------------------------~~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~~~~d~ 233 (251)
T PLN02600 188 -------------------------QEINQKGPLAIKMAKKAINEGS---------EVDMASGLEIEEECYEQVLKTKDR 233 (251)
T ss_pred -------------------------HHHHhCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHHHHHHhCCHHH
Confidence 3599999999999999999875 568999999999999999999999
Q ss_pred HHHHHhhHhCCCCCCCC
Q 015014 394 AEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 394 ~eGv~afl~dk~~~P~~ 410 (414)
+|||++|+ ++++|+|
T Consensus 234 ~eg~~af~--ekr~p~~ 248 (251)
T PLN02600 234 LEGLAAFA--EKRKPVY 248 (251)
T ss_pred HHHHHHHh--cCCCCCC
Confidence 99999999 6677875
No 14
>PRK06142 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-53 Score=412.16 Aligned_cols=259 Identities=20% Similarity=0.279 Sum_probs=225.0
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhh--C-
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQK--D- 141 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~--~- 141 (414)
++.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++...... .
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~~~~ 82 (272)
T PRK06142 5 YESFTVEL-ADHVAQVTLNRPGKGNAMNPAFWSELPEIFRWLDADPEVRAVVLSGSG-KHFSYGIDLPAMAGVFGQLGKD 82 (272)
T ss_pred cceEEEEe-cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CceecccCHHHHhhhccccccc
Confidence 56788886 799999999999999999999999999999999999999999999997 899999999987542100 0
Q ss_pred ---CCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHh
Q 015014 142 ---RNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA 218 (414)
Q Consensus 142 ---~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~ 218 (414)
........+.....+++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~i~~~~kpvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~ 162 (272)
T PRK06142 83 GLARPRTDLRREILRLQAAINAVADCRKPVIAAVQGWCIGGGVDLISACDMRYASADAKFSVREVDLGMVADVGSLQRLP 162 (272)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHhCCCCEEEEecCccccchHHHHHhCCEEEecCCCeecchhhhhCCCCCchHHHHHH
Confidence 00111122333445677789999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCC-CCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhh
Q 015014 219 KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKL 297 (414)
Q Consensus 219 r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 297 (414)
+++|.. ++++|++||++++ |+||+++||||++||+ +++.+.+.+++
T Consensus 163 ~~~G~~-~a~~l~l~g~~~~-a~eA~~~GLv~~vv~~~~~l~~~a~~~a------------------------------- 209 (272)
T PRK06142 163 RIIGDG-HLRELALTGRDID-AAEAEKIGLVNRVYDDADALLAAAHATA------------------------------- 209 (272)
T ss_pred HHhCHH-HHHHHHHhCCCcC-HHHHHHcCCccEecCCHHHHHHHHHHHH-------------------------------
Confidence 999998 9999999999999 9999999999999996 66655444333
Q ss_pred hHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHH
Q 015014 298 LLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVM 377 (414)
Q Consensus 298 ~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l 377 (414)
++|++.||.+++.+|+.+++.. ..++.+++
T Consensus 210 -----------------------------------------~~ia~~~~~a~~~~K~~l~~~~---------~~~l~~~~ 239 (272)
T PRK06142 210 -----------------------------------------REIAAKSPLAVRGTKEVLDYMR---------DHRVADGL 239 (272)
T ss_pred -----------------------------------------HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHH
Confidence 3489999999999999999876 56799999
Q ss_pred HHHHHHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 378 KYEYRVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 378 ~~e~~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+.|...+...+.++|++|||++|+ ++++|+|
T Consensus 240 ~~~~~~~~~~~~~~d~~egv~af~--~kr~p~~ 270 (272)
T PRK06142 240 RYVATWNAAMLPSKDLTEAIAAHM--EKRPPEF 270 (272)
T ss_pred HHHHHHHHHHhcCccHHHHHHHHh--cCCCCCC
Confidence 999999999999999999999999 6777875
No 15
>PRK07657 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.2e-53 Score=408.52 Aligned_cols=255 Identities=23% Similarity=0.320 Sum_probs=226.1
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCC
Q 015014 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (414)
Q Consensus 66 ~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (414)
+.|.++..+++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++... ...
T Consensus 3 ~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~-----~~~ 77 (260)
T PRK07657 3 QNISVDYVTPHVVKITLNRPRAANALSLALLEELQNILTQINEEANVRVVILTGAGEKAFCAGADLKERAGM-----NEE 77 (260)
T ss_pred ceEEEEEccCCEEEEEEeCCcccCCCCHHHHHHHHHHHHHHHhCCCeEEEEEecCCCCceEcCcChHhhhcC-----Chh
Confidence 357777546899999999999999999999999999999999999999999999985699999999987531 111
Q ss_pred chHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 146 LVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 146 ~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
....+......++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.+
T Consensus 78 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~~- 156 (260)
T PRK07657 78 QVRHAVSLIRTTMEMVEQLPQPVIAAINGIALGGGLELALACDFRIAAESASLGLTETTLAIIPGAGGTQRLPRLIGVG- 156 (260)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeechHHHHHHhCCEEEeeCCCEEcCchhccCcCCCccHHHHHHHHhCHH-
Confidence 1233444556678889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
++++|++||++++ |+||+++|||+++||++++++.+.++++
T Consensus 157 ~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~-------------------------------------- 197 (260)
T PRK07657 157 RAKELIYTGRRIS-AQEAKEIGLVEFVVPAHLLEEKAIEIAE-------------------------------------- 197 (260)
T ss_pred HHHHHHHhCCCCC-HHHHHHcCCCCeecCHHHHHHHHHHHHH--------------------------------------
Confidence 9999999999999 9999999999999998887655444433
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
+|++.||.+++.+|+.++... ..++.++++.|...+.
T Consensus 198 ----------------------------------~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~ 234 (260)
T PRK07657 198 ----------------------------------KIASNGPIAVRQAKEAISNGI---------QVDLHTGLQIEKQAYE 234 (260)
T ss_pred ----------------------------------HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHH
Confidence 489999999999999999876 5679999999999999
Q ss_pred HhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 386 RSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
..+.++|++||+++|+ ++++|+|
T Consensus 235 ~~~~~~~~~e~~~af~--~~r~~~~ 257 (260)
T PRK07657 235 GTIPTKDRLEGLQAFK--EKRKPMY 257 (260)
T ss_pred HHhcCHhHHHHHHHHh--cCCCCCC
Confidence 9999999999999999 6677775
No 16
>PRK06494 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-53 Score=407.55 Aligned_cols=254 Identities=22% Similarity=0.322 Sum_probs=219.1
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
|.++.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++.... .
T Consensus 1 ~~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g~~~F~aG~Dl~~~~~~~---~ 76 (259)
T PRK06494 1 MALPFSTVER-KGHVTIVTLNRPEVMNALHLDAHFELEEVFDDFAADPEQWVAIVTGAGDKAFSAGNDLKEQAAGG---K 76 (259)
T ss_pred CCCceeEEEe-ECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEEcCCCCceeccccHHhHhhcC---c
Confidence 3466788876 78999999999999999999999999999999999999999999999867999999999875321 0
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
... ....... +..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|
T Consensus 77 -~~~---~~~~~~~-~~~~~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg 151 (259)
T PRK06494 77 -RGW---PESGFGG-LTSRFDLDKPIIAAVNGVAMGGGFELALACDLIVAAENATFALPEPRVGLAALAGGLHRLPRQIG 151 (259)
T ss_pred -chh---hhHHHHH-HHHHhcCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCchHHHHHHHHcC
Confidence 000 0111112 23456899999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||+.++ |+||+++||||++||++++.+.+.+++
T Consensus 152 ~~-~a~~lll~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~a------------------------------------ 193 (259)
T PRK06494 152 LK-RAMGMILTGRRVT-AREGLELGFVNEVVPAGELLAAAERWA------------------------------------ 193 (259)
T ss_pred HH-HHHHHHHcCCcCC-HHHHHHcCCCcEecCHhHHHHHHHHHH------------------------------------
Confidence 98 9999999999999 999999999999999887765444433
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHH--
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE-- 380 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e-- 380 (414)
++|++.||.+++.+|+++++.. ..++++.++.|
T Consensus 194 ------------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~ 228 (259)
T PRK06494 194 ------------------------------------DDILACSPLSIRASKQAVYRGL---------EVSLEEAITAQRD 228 (259)
T ss_pred ------------------------------------HHHHhcCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHH
Confidence 3499999999999999999876 56799999999
Q ss_pred HHHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 381 YRVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 381 ~~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
...+..++.++|++||+++|+ ++++|+|
T Consensus 229 ~~~~~~~~~~~d~~eg~~af~--~kr~p~~ 256 (259)
T PRK06494 229 YPAVEARRASQDYIEGPKAFA--EKRPPRW 256 (259)
T ss_pred HHHHHHHhcCccHHHHHHHHH--ccCCCCC
Confidence 556778889999999999999 5677775
No 17
>PRK09674 enoyl-CoA hydratase-isomerase; Provisional
Probab=100.00 E-value=2.8e-53 Score=406.63 Aligned_cols=250 Identities=21% Similarity=0.309 Sum_probs=221.1
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++... + .
T Consensus 3 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~~~~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~---~----~ 73 (255)
T PRK09674 3 ELLVSR-QQRVLLLTLNRPEARNALNNALLTQLVNELEAAATDTSIGVCVITGNA-RFFAAGADLNEMAEK---D----L 73 (255)
T ss_pred eEEEEe-ECCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CceecccChHhHhcc---c----h
Confidence 466765 789999999999999999999999999999999999999999999997 899999999987531 1 0
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 74 ~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ig~~-~ 152 (255)
T PRK09674 74 AATLNDPRPQLWQRLQAFNKPLIAAVNGYALGAGCELALLCDIVIAGENARFGLPEITLGIMPGAGGTQRLIRSVGKS-L 152 (255)
T ss_pred hhhHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEeCchhhcCCCCCccHHHHHHHHhCHH-H
Confidence 111222234567789999999999999999999999999999999999999999999999999999999999999997 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||+.++ |+||+++||||+|||++++.+.+.++
T Consensus 153 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a~~~----------------------------------------- 190 (255)
T PRK09674 153 ASQMVLTGESIT-AQQAQQAGLVSEVFPPELTLERALQL----------------------------------------- 190 (255)
T ss_pred HHHHHHcCCccC-HHHHHHcCCCcEecChHHHHHHHHHH-----------------------------------------
Confidence 999999999999 99999999999999988775443333
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
+++|++.||.+++.+|+.++... ..++.+.++.|.+.+..
T Consensus 191 -------------------------------a~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 230 (255)
T PRK09674 191 -------------------------------ASKIARHSPLALRAAKQALRQSQ---------EVDLQAGLAQERQLFTL 230 (255)
T ss_pred -------------------------------HHHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHH
Confidence 33599999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+.++|++|||++|+ ++++|+|
T Consensus 231 ~~~~~~~~e~i~af~--~kr~p~~ 252 (255)
T PRK09674 231 LAATEDRHEGISAFL--EKRTPDF 252 (255)
T ss_pred HhcCHHHHHHHHHHh--ccCCCCC
Confidence 999999999999999 5677775
No 18
>PLN02664 enoyl-CoA hydratase/delta3,5-delta2,4-dienoyl-CoA isomerase
Probab=100.00 E-value=3.2e-53 Score=410.49 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=219.9
Q ss_pred ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC--CC----Cc
Q 015014 73 HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR--NT----PL 146 (414)
Q Consensus 73 ~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~--~~----~~ 146 (414)
.+++|++|+||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........ +. ..
T Consensus 14 ~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g-~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 92 (275)
T PLN02664 14 PNSSVFHLNLNRPSQRNALSLDFFTEFPKALSSLDQNPNVSVIILSGAG-DHFCSGIDLKTLNSISEQSSSGDRGRSGER 92 (275)
T ss_pred CCCCEEEEEECCCCccCCCCHHHHHHHHHHHHHHHhCCCcEEEEEECCC-CceeeCcChHHhhhcccccccccchhhHHH
Confidence 3789999999999999999999999999999999999999999999997 89999999998754211000 00 01
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...+......++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.+ +
T Consensus 93 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 171 (275)
T PLN02664 93 LRRKIKFLQDAITAIEQCRKPVIAAIHGACIGGGVDIVTACDIRYCSEDAFFSVKEVDLAITADLGTLQRLPSIVGYG-N 171 (275)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCccccchHHHHHhCCEEEecCCCEeccHHHhhCCCCCccHHHHHHHHhCHH-H
Confidence 122233334567789999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCC-CCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
+++|++||+.++ |+||+++||||++||+ +++.+.+.+++
T Consensus 172 A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~~l~~~~~~~a--------------------------------------- 211 (275)
T PLN02664 172 AMELALTGRRFS-GSEAKELGLVSRVFGSKEDLDEGVRLIA--------------------------------------- 211 (275)
T ss_pred HHHHHHhCCCCC-HHHHHHcCCCceeeCChhHHHHHHHHHH---------------------------------------
Confidence 999999999999 9999999999999995 66654433333
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
++|++.||.+++.+|++++... ..++.++++.|...+.
T Consensus 212 ---------------------------------~~ia~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~ 249 (275)
T PLN02664 212 ---------------------------------EGIAAKSPLAVTGTKAVLLRSR---------ELSVEQGLDYVATWNS 249 (275)
T ss_pred ---------------------------------HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHH
Confidence 3599999999999999999876 5679999999999999
Q ss_pred HhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 386 RSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
..+.++|++||+++|+ ++|+|.|-+
T Consensus 250 ~~~~~~d~~eg~~af~--ekr~p~~~~ 274 (275)
T PLN02664 250 AMLVSDDLNEAVSAQI--QKRKPVFAK 274 (275)
T ss_pred HhccChhHHHHHHHHh--ccCCCCCCC
Confidence 9999999999999999 677888754
No 19
>PRK08150 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.2e-53 Score=405.28 Aligned_cols=251 Identities=22% Similarity=0.286 Sum_probs=221.3
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCC
Q 015014 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (414)
Q Consensus 66 ~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (414)
+.|.++. +++|++|+||||++.|+||.+|+.+|.++++.++ +++|+|||||.| ++||+|+|++++... + ..
T Consensus 2 ~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~--~~vr~vvltg~g-~~F~aG~Dl~~~~~~---~--~~ 72 (255)
T PRK08150 2 SLVSYEL-DGGVATIGLNRPAKRNALNDGLIAALRAAFARLP--EGVRAVVLHGEG-DHFCAGLDLSELRER---D--AG 72 (255)
T ss_pred ceEEEEe-eCCEEEEEEcCCccccCCCHHHHHHHHHHHHHhh--cCCeEEEEECCC-CceecCcCHHHHhhc---c--ch
Confidence 3467776 7899999999999999999999999999999987 789999999997 799999999987541 1 11
Q ss_pred chHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 146 LVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 146 ~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
....+....+.++.+|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..
T Consensus 73 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~- 151 (255)
T PRK08150 73 EGMHHSRRWHRVFDKIQYGRVPVIAALHGAVVGGGLELASAAHIRVADESTYFALPEGQRGIFVGGGGSVRVPRLIGVA- 151 (255)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEECCEEEcHHHHHHHhCCEEEEeCCCEEeccccccCCCCCccHHHHHHHHhCHH-
Confidence 1122334445677889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
++++|++||+.++ |+||+++||||++||++++.+.+.++++
T Consensus 152 ~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~-------------------------------------- 192 (255)
T PRK08150 152 RMTDMMLTGRVYD-AQEGERLGLAQYLVPAGEALDKAMELAR-------------------------------------- 192 (255)
T ss_pred HHHHHHHcCCcCC-HHHHHHcCCccEeeCchHHHHHHHHHHH--------------------------------------
Confidence 9999999999999 9999999999999999887665444433
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
+|+++||.+++.+|++++... ..++++.++.|.+.+.
T Consensus 193 ----------------------------------~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~ 229 (255)
T PRK08150 193 ----------------------------------RIAQNAPLTNFAVLNALPRIA---------DMSADDGLFVESLMAA 229 (255)
T ss_pred ----------------------------------HHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHHHHH
Confidence 499999999999999999875 5679999999999888
Q ss_pred HhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 386 RSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
..+.++|++||+++|+ ++++|+|
T Consensus 230 ~~~~s~d~~eg~~af~--~kr~p~~ 252 (255)
T PRK08150 230 VAQSAPEAKERLRAFL--EKKAAKV 252 (255)
T ss_pred HHhcCHHHHHHHHHHh--ccCCCCC
Confidence 8999999999999999 6777877
No 20
>PRK06143 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.1e-53 Score=405.60 Aligned_cols=249 Identities=21% Similarity=0.288 Sum_probs=221.1
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
..+++.++..+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++... .
T Consensus 4 ~~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~-----~ 78 (256)
T PRK06143 4 LNAHAGVTRDDRGVATLTIRNAGSLNILGTPVILALTQALRWLAADPDVRVLVLRGAGEKAFIGGADIKEMATL-----D 78 (256)
T ss_pred ccccceeeecCCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhcCCCcEEEEEEeCCCCcccCCcCHHHHhhc-----C
Confidence 34557777667899999999999999999999999999999999999999999999986799999999987541 1
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
......+......++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|+ |++|++++|++++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~-p~~~~~~~l~~~iG~ 157 (256)
T PRK06143 79 QASAEAFISRLRDLCDAVRHFPVPVIARIPGWCLGGGLELAAACDLRIAAHDAQFGMPEVRVGI-PSVIHAALLPRLIGW 157 (256)
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCCEEEEECCEEeehhHHHHHhCCEEEecCCCEEeCCccccCC-CCccHHHHHHHhcCH
Confidence 1122334455566788899999999999999999999999999999999999999999999998 888889999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++||||++||++++.+.+.++++
T Consensus 158 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------ 199 (256)
T PRK06143 158 A-RTRWLLLTGETID-AAQALAWGLVDRVVPLAELDAAVERLAA------------------------------------ 199 (256)
T ss_pred H-HHHHHHHcCCcCC-HHHHHHCCCcCeecCHHHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999998887655444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|++.||.+++.+|+.++... ..++++.++.|...
T Consensus 200 ------------------------------------~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~ 234 (256)
T PRK06143 200 ------------------------------------SLAGCGPQALRQQKRLLREWE---------DMPLDVAIDDSVAE 234 (256)
T ss_pred ------------------------------------HHHcCCHHHHHHHHHHHHHHc---------cCCHHHHHHHHHHH
Confidence 499999999999999999865 56799999999999
Q ss_pred HHHhCCCchHHHHHHhhH
Q 015014 384 ALRSSLRSDFAEGVRAVL 401 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl 401 (414)
+...+.++|++||+++|+
T Consensus 235 ~~~~~~~~d~~e~~~af~ 252 (256)
T PRK06143 235 FGAAFLTGEPQRHMAAFL 252 (256)
T ss_pred HHHHhcChHHHHHHHHHH
Confidence 999999999999999999
No 21
>PRK08140 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.5e-53 Score=406.25 Aligned_cols=257 Identities=23% Similarity=0.331 Sum_probs=223.0
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.++.+.++. +++|++||||||+++|++|.+|+.+|.++++.++ |+++++|||+|.| ++||+|+|++++.... ...
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~~~~~~-d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~--~~~ 76 (262)
T PRK08140 2 MYETILLAI-EAGVATLTLNRPDKLNSFTREMHRELREALDQVE-DDGARALLLTGAG-RGFCAGQDLADRDVTP--GGA 76 (262)
T ss_pred CCceEEEEe-ECCEEEEEecCCcccCCCCHHHHHHHHHHHHHhc-CCCceEEEEECCC-CCcccCcChHHHhccc--ccc
Confidence 456688886 7899999999999999999999999999999999 9999999999998 8999999999874311 000
Q ss_pred CCchHHHHHH-HHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 144 TPLVPKVFTA-EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 144 ~~~~~~~~~~-~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
.......+.. ...++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG 156 (262)
T PRK08140 77 MPDLGESIETFYNPLVRRLRALPLPVIAAVNGVAAGAGANLALACDIVLAARSASFIQAFVKIGLVPDSGGTWFLPRLVG 156 (262)
T ss_pred chhhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEEeccccccCCCCCccHHHHHHHHhC
Confidence 1111111222 234677899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||+.++ |+||+++|||++|||++++.+.+.+++
T Consensus 157 ~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------ 198 (262)
T PRK08140 157 MA-RALGLALLGEKLS-AEQAEQWGLIWRVVDDAALADEAQQLA------------------------------------ 198 (262)
T ss_pred HH-HHHHHHHcCCCcC-HHHHHHcCCccEeeChHHHHHHHHHHH------------------------------------
Confidence 98 9999999999999 999999999999999887765444433
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
++|++.||.+++.+|+.++... ..++.++++.|..
T Consensus 199 ------------------------------------~~ia~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~ 233 (262)
T PRK08140 199 ------------------------------------AHLATQPTRGLALIKQAMNASA---------TNTLDAQLDLERD 233 (262)
T ss_pred ------------------------------------HHHHhCCHHHHHHHHHHHHHhh---------hCCHHHHHHHHHH
Confidence 3489999999999999999876 5689999999999
Q ss_pred HHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 383 VALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 383 ~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+...+.++|++||+++|+ ++++|.|
T Consensus 234 ~~~~~~~~~~~~e~~~af~--~kr~p~~ 259 (262)
T PRK08140 234 LQREAGRSADYAEGVSAFL--EKRAPRF 259 (262)
T ss_pred HHHHHhcChhHHHHHHHHh--cCCCCCC
Confidence 9999999999999999999 6777775
No 22
>PRK07799 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6.5e-53 Score=405.93 Aligned_cols=256 Identities=21% Similarity=0.279 Sum_probs=221.2
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
++.+.++. +++|++||||||+++|++|.+|+++|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus 4 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~---~~~ 78 (263)
T PRK07799 4 GPHALVEQ-RGHTLIVTMNRPEARNALSTEMLRIMVDAWDRVDNDPDIRSCILTGAG-GAFCAGMDLKAATKKP---PGD 78 (263)
T ss_pred CceEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CccccccCHHHHhhcc---ccc
Confidence 46688886 789999999999999999999999999999999999999999999997 8999999999876421 001
Q ss_pred CchHH-HHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 145 PLVPK-VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 145 ~~~~~-~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
..... +.......+..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG~ 158 (263)
T PRK07799 79 SFKDGSYDPSRIDALLKGRRLTKPLIAAVEGPAIAGGTEILQGTDIRVAGESAKFGISEAKWSLFPMGGSAVRLVRQIPY 158 (263)
T ss_pred hhhhhhhhhhHHHHHHHHhcCCCCEEEEECCeEeccHHHHHHhCCEEEecCCCEecCcccccCcCCCccHHHHHHHHhCH
Confidence 10000 11111122335788999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
+ ++++|++||+.++ |+||+++||||+|||++++.+.+.+++
T Consensus 159 ~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------- 199 (263)
T PRK07799 159 T-VACDLLLTGRHIT-AAEAKEIGLIGHVVPDGQALDKALELA------------------------------------- 199 (263)
T ss_pred H-HHHHHHHcCCCCC-HHHHHHcCCccEecCcchHHHHHHHHH-------------------------------------
Confidence 8 9999999999999 999999999999999988765443332
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|+.++... ..++.++++.|.+.
T Consensus 200 -----------------------------------~~~~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~ 235 (263)
T PRK07799 200 -----------------------------------ELINANGPLAVQAILRTIRETE---------GMHENEAFKIDTKI 235 (263)
T ss_pred -----------------------------------HHHHhcChHHHHHHHHHHHHhh---------cCCHHHHHHHHHHH
Confidence 3589999999999999999876 56799999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+..++.++|++|||++|+ ++++|+|
T Consensus 236 ~~~~~~~~~~~egi~af~--~~r~p~~ 260 (263)
T PRK07799 236 GIPVFLSEDAKEGPRAFA--EKRAPNF 260 (263)
T ss_pred HHHHhcCccHHHHHHHHH--ccCCCCC
Confidence 999999999999999999 6778876
No 23
>PRK08138 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-52 Score=403.88 Aligned_cols=253 Identities=22% Similarity=0.317 Sum_probs=223.8
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
.+.+.++..+++|++|+||||+++|++|.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++... .
T Consensus 6 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~---~--- 78 (261)
T PRK08138 6 TDVVLLERPADGVALLRLNRPEARNALNMEVRQQLAEHFTELSEDPDIRAIVLTGGE-KVFAAGADIKEFATA---G--- 78 (261)
T ss_pred CCCEEEEEccCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCeeEEEEECCC-CCeeCCcCHHHHhcc---c---
Confidence 456777765789999999999999999999999999999999999999999999987 899999999987531 1
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
....+......++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..
T Consensus 79 -~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~ 157 (261)
T PRK08138 79 -AIEMYLRHTERYWEAIAQCPKPVIAAVNGYALGGGCELAMHADIIVAGESASFGQPEIKVGLMPGAGGTQRLVRAVGKF 157 (261)
T ss_pred -hhHHHHHHHHHHHHHHHhCCCCEEEEEccEEEcHHHHHHHhCCEEEecCCCEeeCcccccccCCCCcHHHHHHHHhCHH
Confidence 1122333345677789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||+.++ |+||+++||||++||++++.+.+.++++
T Consensus 158 -~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------- 198 (261)
T PRK08138 158 -KAMRMALTGCMVP-APEALAIGLVSEVVEDEQTLPRALELAR------------------------------------- 198 (261)
T ss_pred -HHHHHHHcCCCCC-HHHHHHCCCCcEecCchHHHHHHHHHHH-------------------------------------
Confidence 9999999999999 9999999999999998887654443332
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
+|++.||.+++.+|++++... ..++++++..|.+.+
T Consensus 199 -----------------------------------~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~ 234 (261)
T PRK08138 199 -----------------------------------EIARMPPLALAQIKEVVLAGA---------DAPLDAALALERKAF 234 (261)
T ss_pred -----------------------------------HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHH
Confidence 488899999999999999876 567999999999999
Q ss_pred HHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 385 LRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
..++.++|++||+++|+ ++++|+|
T Consensus 235 ~~~~~~~~~~~~i~af~--~kr~~~~ 258 (261)
T PRK08138 235 QLLFDSEDQKEGMDAFL--EKRKPAY 258 (261)
T ss_pred HHHhcCHHHHHHHHHHh--cCCCCCC
Confidence 99999999999999999 6677775
No 24
>PRK08139 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=9.2e-53 Score=405.35 Aligned_cols=256 Identities=23% Similarity=0.333 Sum_probs=225.5
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
+..+++.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++....
T Consensus 8 ~~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~---- 81 (266)
T PRK08139 8 TEAPLLLRED-RDGVATLTLNRPQAFNALSEAMLAALQAALDAIAADPSVRVVVLAAAG-KAFCAGHDLKEMRAAR---- 81 (266)
T ss_pred ccCCceEEEe-eCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEecCC-CcceeccCHHHHhccc----
Confidence 4567788886 799999999999999999999999999999999999999999999998 8999999999875311
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
.......++....+++.++.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +++|+|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~-~~~l~r~vG 160 (266)
T PRK08139 82 GLAYFRALFARCSRVMQAIVALPQPVIARVHGIATAAGCQLVASCDLAVAADTARFAVPGVNIGLFCSTP-MVALSRNVP 160 (266)
T ss_pred chhHHHHHHHHHHHHHHHHHhCCCCEEEEECceeeHHHHHHHHhCCEEEEeCCCEEeCcccCcCCCCCcc-HHHHHHHhC
Confidence 1122233444556678889999999999999999999999999999999999999999999999999765 568999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||+.++ |+||+++||||+|+|++++.+.+.+++
T Consensus 161 ~~-~A~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~a------------------------------------ 202 (266)
T PRK08139 161 RK-QAMEMLLTGEFID-AATAREWGLVNRVVPADALDAAVARLA------------------------------------ 202 (266)
T ss_pred HH-HHHHHHHcCCccC-HHHHHHcCCccEeeChhHHHHHHHHHH------------------------------------
Confidence 98 9999999999999 999999999999999888765544443
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
++|++.||.+++.+|++++... ..+++++++.|..
T Consensus 203 ------------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~ 237 (266)
T PRK08139 203 ------------------------------------AVIAAKSPAAVRIGKEAFYRQA---------EMPLADAYAYAGD 237 (266)
T ss_pred ------------------------------------HHHHhCCHHHHHHHHHHHHHhc---------cCCHHHHHHHHHH
Confidence 3499999999999999999876 5679999999999
Q ss_pred HHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 383 VALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 383 ~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+...+.++|++||+++|+ ++++|+|
T Consensus 238 ~~~~~~~~~d~~eg~~af~--~kr~p~~ 263 (266)
T PRK08139 238 VMAENMMAEDAEEGIDAFL--EKRPPEW 263 (266)
T ss_pred HHHHHhcCchHHHHHHHHh--cCCCCCC
Confidence 9999999999999999999 6677775
No 25
>TIGR02280 PaaB1 phenylacetate degradation probable enoyl-CoA hydratase paaB. This family of proteins are found within apparent operons for the degradation of phenylacetic acid. These proteins contain the enoyl-CoA hydratase domain as detected by pfam00378. This activity is consistent with current hypotheses for the degradation pathway which involve the ligation of phenylacetate with coenzyme A (paaF), hydroxylation (paaGHIJK), ring-opening (paaN) and degradation of the resulting fatty acid-like compound to a Krebs cycle intermediate (paaABCDE).
Probab=100.00 E-value=7.6e-53 Score=403.92 Aligned_cols=252 Identities=24% Similarity=0.335 Sum_probs=219.4
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchH
Q 015014 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVP 148 (414)
Q Consensus 69 ~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~ 148 (414)
.++. +++|++||||||++.|+||.+|+.+|.++++.+++|+ +++|||+|.| ++||+|+|++++.... ....+...
T Consensus 2 ~~e~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~-v~~vVltg~g-~~F~aG~Dl~~~~~~~--~~~~~~~~ 76 (256)
T TIGR02280 2 LSAL-EAGVARLTLNRPDKLNSFTAEMHLELREALERVERDD-ARALMLTGAG-RGFCAGQDLSERNPTP--GGAPDLGR 76 (256)
T ss_pred eEEE-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCC-cEEEEEECCC-CCcccCcCHHHHhhcc--ccchhHHH
Confidence 4565 7899999999999999999999999999999999999 9999999997 8999999999875311 00111111
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHH
Q 015014 149 KVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 228 (414)
Q Consensus 149 ~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~ 228 (414)
.+......++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.. +++
T Consensus 77 ~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~lG~~p~~g~~~~l~~~vG~~-~a~ 155 (256)
T TIGR02280 77 TIETFYNPLVRRLRALPLPVVCAVNGVAAGAGANLALACDIVLAAESARFIQAFAKIGLIPDSGGTWSLPRLVGRA-RAM 155 (256)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhCHH-HHH
Confidence 1111123466789999999999999999999999999999999999999999999999999999999999999998 999
Q ss_pred HHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcCC
Q 015014 229 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSS 308 (414)
Q Consensus 229 ~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~ 308 (414)
+|++||++++ |+||+++|||++++|++++.+.+.++++
T Consensus 156 ~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~----------------------------------------- 193 (256)
T TIGR02280 156 GLAMLGEKLD-ARTAASWGLIWQVVDDAALMDEAQALAV----------------------------------------- 193 (256)
T ss_pred HHHHcCCCCC-HHHHHHcCCcceeeChHHHHHHHHHHHH-----------------------------------------
Confidence 9999999999 9999999999999998887655444433
Q ss_pred cccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhC
Q 015014 309 EKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSS 388 (414)
Q Consensus 309 ~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~ 388 (414)
+|++.||.+++.+|+.++... ...+.+.++.|.+.+..++
T Consensus 194 -------------------------------~la~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~~ 233 (256)
T TIGR02280 194 -------------------------------HLAAQPTRGLALTKRAIQAAA---------TNSLDTQLDLERDLQRELG 233 (256)
T ss_pred -------------------------------HHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHHh
Confidence 489999999999999999876 5679999999999999999
Q ss_pred CCchHHHHHHhhHhCCCCCCCC
Q 015014 389 LRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 389 ~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.++|++||+++|+ ++++|+|
T Consensus 234 ~~~d~~eg~~af~--~kr~p~~ 253 (256)
T TIGR02280 234 RSADYAEGVTAFL--DKRNPQF 253 (256)
T ss_pred cChhHHHHHHHHH--cCCCCCC
Confidence 9999999999999 6778875
No 26
>PRK07658 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.1e-53 Score=403.65 Aligned_cols=252 Identities=25% Similarity=0.328 Sum_probs=222.8
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
++.++. +++|++||||||++ |++|.+|+++|.++++.++.|+++|+|||+|.| ++||+|+|++++.... ....
T Consensus 3 ~i~~~~-~~~v~~itl~rp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~----~~~~ 75 (257)
T PRK07658 3 FLSVRV-EDHVAVITLNHPPA-NALSSQVLHELSELLDQVEKDDNVRVVVIHGEG-RFFSAGADIKEFTSVT----EAEQ 75 (257)
T ss_pred eEEEEe-eCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceEeCcCHHHHhccC----chhh
Confidence 467776 78999999999986 999999999999999999999999999999997 8999999999875321 1111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...+......++.+|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 76 ~~~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~ 154 (257)
T PRK07658 76 ATELAQLGQVTFERVEKFSKPVIAAIHGAALGGGLELAMSCHIRFATESAKLGLPELNLGLIPGFAGTQRLPRYVGKA-K 154 (257)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEEcCeeeeHHHHHHHhCCEEEecCCCcccCcccccCCCCCCcHHHHHHHHhCHH-H
Confidence 222334445677889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++||||++||++++.+.+.+++
T Consensus 155 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a---------------------------------------- 193 (257)
T PRK07658 155 ALEMMLTSEPIT-GAEALKWGLVNGVFPEETLLDDAKKLA---------------------------------------- 193 (257)
T ss_pred HHHHHHcCCCcC-HHHHHHcCCcCeecChhHHHHHHHHHH----------------------------------------
Confidence 999999999999 999999999999999888765443333
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
++|++.||.+++.+|++++... ..++++.++.|...+..
T Consensus 194 --------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 232 (257)
T PRK07658 194 --------------------------------KKIAGKSPATTRAVLELLQTTK---------SSSYYEGVKREAKIFGE 232 (257)
T ss_pred --------------------------------HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 3489999999999999999876 56799999999999999
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
++.++|++|||++|+ ++++|+|
T Consensus 233 ~~~~~~~~egi~af~--~kr~p~~ 254 (257)
T PRK07658 233 VFTSEDAKEGVQAFL--EKRKPSF 254 (257)
T ss_pred HhCCHHHHHHHHHHH--cCCCCCC
Confidence 999999999999999 6677876
No 27
>PRK09120 p-hydroxycinnamoyl CoA hydratase/lyase; Validated
Probab=100.00 E-value=1.1e-52 Score=406.53 Aligned_cols=259 Identities=25% Similarity=0.322 Sum_probs=221.5
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.|++|.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....... .
T Consensus 6 ~~~~i~~~~-~~~va~itlnrp~~~Nal~~~m~~el~~al~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~-~ 82 (275)
T PRK09120 6 RWDTVKVEV-EDGIAWVTLNRPEKRNAMSPTLNREMIDVLDALEFDDDAGVLVLTGAG-DAWSAGMDLKEYFRETDAQ-P 82 (275)
T ss_pred ccccEEEEE-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHHhCCCceEEEEEcCC-CceecCcCHHHHhhccccc-h
Confidence 367788886 789999999999999999999999999999999999999999999997 8999999999875421100 0
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
...........+.++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 83 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~ 162 (275)
T PRK09120 83 EILQERIRREAYGWWRRLRWYQKPTIAMVNGWCFGGGFSPLVACDLAIAADEAQFGLSEINWGIPPGGGVSKAMADTVGH 162 (275)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCEEechhHHHHHhCCEEEEeCCcEecCCccccCCCCCcchHHHHHHHcCH
Confidence 10112223334567778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++|||++|||++++++.+.++++
T Consensus 163 ~-~a~~llltg~~~~-A~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------ 204 (275)
T PRK09120 163 R-DALYYIMTGETFT-GRKAAEMGLVNESVPLAQLRARTRELAA------------------------------------ 204 (275)
T ss_pred H-HHHHHHhcCCccC-HHHHHHcCCcceecCHHHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999999888665544433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|++.||.+++.+|+.++... ..++.+.++.|...
T Consensus 205 ------------------------------------~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~ 239 (275)
T PRK09120 205 ------------------------------------KLLEKNPVVLRAAKDGFKRVR---------ELTWDQAEDYLYAK 239 (275)
T ss_pred ------------------------------------HHHhCCHHHHHHHHHHHHHHH---------hCCHHHHHHHHHHH
Confidence 499999999999999999876 56789998887654
Q ss_pred --HHHhCCCc-hHHHHHHhhHhCCCCCC
Q 015014 384 --ALRSSLRS-DFAEGVRAVLVDKDQVL 408 (414)
Q Consensus 384 --~~~~~~~~-D~~eGv~afl~dk~~~P 408 (414)
....+.++ |++||+++|+.++..+|
T Consensus 240 ~~~~~~~~~~~d~~eg~~afl~kr~~~~ 267 (275)
T PRK09120 240 LEQANSLDPEGGREEGLKQFLDDKSYKP 267 (275)
T ss_pred HHHHHhhCCHHHHHHHHHHHHhcccCCc
Confidence 44467888 99999999996555455
No 28
>PRK09245 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.1e-52 Score=405.00 Aligned_cols=257 Identities=21% Similarity=0.278 Sum_probs=222.5
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCH-HHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC-CC
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNL-DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR-NT 144 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~-~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~-~~ 144 (414)
.+.++. +++|++||||||+++|++|. +|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++........ ..
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~~~~~~~ 81 (266)
T PRK09245 4 FLLVER-DGHIVTLTMNRPETRNALSDNDAVDALVAACAAINADRSVRAVILTGAG-TAFSSGGNVKDMRARVGAFGGSP 81 (266)
T ss_pred ceEEEE-ECCEEEEEECCcccccCCChHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccCcCHHHHhhccccccccc
Confidence 477776 78999999999999999995 9999999999999999999999999997 89999999998754211000 01
Q ss_pred Cch-HHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 145 PLV-PKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 145 ~~~-~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
... ..+......++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~vG~ 161 (266)
T PRK09245 82 ADIRQGYRHGIQRIPLALYNLEVPVIAAVNGPAIGAGCDLACMCDIRIASETARFAESFVKLGLIPGDGGAWLLPRIIGM 161 (266)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCEEEEECCEeecHHHHHHHhCCEEEecCCCEEcccccccCcCCCcchhhhHHHHhhH
Confidence 111 1122233456778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||++++ |+||+++||||+|||++++++.+.+++
T Consensus 162 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------- 202 (266)
T PRK09245 162 A-RAAEMAFTGDAID-AATALEWGLVSRVVPADQLLPAARALA------------------------------------- 202 (266)
T ss_pred H-HHHHHHHcCCCcC-HHHHHHcCCcceecCHHHHHHHHHHHH-------------------------------------
Confidence 8 9999999999999 999999999999999888765444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|++++... ..++++.++.|...
T Consensus 203 -----------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~ 238 (266)
T PRK09245 203 -----------------------------------ERIAANPPHALRLTKRLLREGQ---------HASLDTLLELSAAY 238 (266)
T ss_pred -----------------------------------HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHH
Confidence 3499999999999999999875 56799999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
....+.++|++||+++|+ ++++|.|
T Consensus 239 ~~~~~~~~d~~eg~~af~--~kr~p~~ 263 (266)
T PRK09245 239 QALAHHTADHREAVDAFL--EKRPPVF 263 (266)
T ss_pred HHHHhcCHhHHHHHHHHH--cCCCCCC
Confidence 999999999999999999 6777876
No 29
>PRK08252 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-52 Score=401.20 Aligned_cols=248 Identities=19% Similarity=0.246 Sum_probs=216.1
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++... . ....
T Consensus 4 ~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~---~-~~~~ 77 (254)
T PRK08252 4 EVLVER-RGRVLIITINRPEARNAVNAAVAQGLAAALDELDADPDLSVGILTGAG-GTFCAGMDLKAFARG---E-RPSI 77 (254)
T ss_pred eEEEEE-ECCEEEEEECCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CceEcCcCHHHHhcc---c-chhh
Confidence 467776 789999999999999999999999999999999999999999999997 899999999987541 1 1110
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
.......+. ...+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 78 ---~~~~~~~~~--~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~ 151 (254)
T PRK08252 78 ---PGRGFGGLT--ERPPRKPLIAAVEGYALAGGFELALACDLIVAARDAKFGLPEVKRGLVAAGGGLLRLPRRIPYH-I 151 (254)
T ss_pred ---hHHHHHHHH--HhcCCCCEEEEECCEEehHHHHHHHhCCEEEEeCCCEEeCchhhcCCCCCchHHHHHHHHcCHH-H
Confidence 111111121 2469999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++||||+|||++++.+.+.++
T Consensus 152 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~----------------------------------------- 189 (254)
T PRK08252 152 AMELALTGDMLT-AERAHELGLVNRLTEPGQALDAALEL----------------------------------------- 189 (254)
T ss_pred HHHHHHcCCccC-HHHHHHcCCcceecCcchHHHHHHHH-----------------------------------------
Confidence 999999999999 99999999999999988875544333
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
+++|++.||.+++.+|++++... ..++.++++.|...+..
T Consensus 190 -------------------------------a~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~ 229 (254)
T PRK08252 190 -------------------------------AERIAANGPLAVAASKRIVVESG---------DWSEDEMFARQRELIAP 229 (254)
T ss_pred -------------------------------HHHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHH
Confidence 33589999999999999999875 56799999999999999
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+.++|++||+++|+ ++++|+|
T Consensus 230 ~~~~~~~~eg~~af~--~kr~p~~ 251 (254)
T PRK08252 230 VFTSADAKEGATAFA--EKRAPVW 251 (254)
T ss_pred HhcCchHHHHHHHHh--cCCCCCC
Confidence 999999999999999 5677776
No 30
>PRK06563 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=9.5e-53 Score=403.04 Aligned_cols=250 Identities=20% Similarity=0.210 Sum_probs=217.0
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchH
Q 015014 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVP 148 (414)
Q Consensus 69 ~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~ 148 (414)
.++. +++|++||||||++.|+||.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++..... . . ..
T Consensus 2 ~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vrvvvl~g~g-~~F~aG~Dl~~~~~~~~-~---~-~~ 74 (255)
T PRK06563 2 SRER-RGHVLLIGLDRPAKRNAFDSAMLDDLALALGEYEADDELRVAVLFAHG-EHFTAGLDLADVAPKLA-A---G-GF 74 (255)
T ss_pred eEEE-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEECCC-CCCcCCcCHHHHhhccc-c---c-hh
Confidence 4555 789999999999999999999999999999999999999999999997 89999999998754210 0 0 11
Q ss_pred HHHHHHHH-HHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHH
Q 015014 149 KVFTAEYS-LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 227 (414)
Q Consensus 149 ~~~~~~~~-l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a 227 (414)
.+.....+ +...+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.+ ++
T Consensus 75 ~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~~-~a 153 (255)
T PRK06563 75 PFPEGGIDPWGTVGRRLSKPLVVAVQGYCLTLGIELMLAADIVVAADNTRFAQLEVQRGILPFGGATLRFPQAAGWG-NA 153 (255)
T ss_pred hhhhhhhHHHHHHHhcCCCCEEEEEcCeeecHHHHHHHhCCEEEecCCCEEeChhhhcCCCCCccHHHHHHHHhhHH-HH
Confidence 12111222 22357899999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcC
Q 015014 228 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 307 (414)
Q Consensus 228 ~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 307 (414)
++|++||+.++ |+||+++||||+++|++++.+.+.+++
T Consensus 154 ~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a----------------------------------------- 191 (255)
T PRK06563 154 MRYLLTGDEFD-AQEALRLGLVQEVVPPGEQLERAIELA----------------------------------------- 191 (255)
T ss_pred HHHHHcCCCcC-HHHHHHcCCCcEeeCHHHHHHHHHHHH-----------------------------------------
Confidence 99999999999 999999999999999887765444433
Q ss_pred CcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHh
Q 015014 308 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 387 (414)
Q Consensus 308 ~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~ 387 (414)
++|++.||.+++.+|++++... ..++.++++.|...+...
T Consensus 192 -------------------------------~~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~~ 231 (255)
T PRK06563 192 -------------------------------ERIARAAPLGVQATLASARAAV---------REGEAAAAAQLPPELRPL 231 (255)
T ss_pred -------------------------------HHHHhcCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHHH
Confidence 3489999999999999999865 568999999999999999
Q ss_pred CCCchHHHHHHhhHhCCCCCCCC
Q 015014 388 SLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 388 ~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+.++|++||+++|+ ++|+|.|
T Consensus 232 ~~~~d~~eg~~af~--~kr~p~~ 252 (255)
T PRK06563 232 FTSEDAKEGVQAFL--ERRPARF 252 (255)
T ss_pred hcCchHHHHHHHHh--cCCCCCC
Confidence 99999999999999 6777775
No 31
>PRK07468 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-52 Score=403.02 Aligned_cols=257 Identities=21% Similarity=0.297 Sum_probs=220.5
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
++.+.++..+++|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++...... ..
T Consensus 3 ~~~~~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~--~~ 79 (262)
T PRK07468 3 FETIRIAVDARGVATLTLNRPEKHNALSARMIAELTTAARRLAADAAVRVVVLTGAG-KSFCAGGDLGWMRAQMTA--DR 79 (262)
T ss_pred cceEEEEEcCCcEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CcccCCcCHHHHHhhccc--ch
Confidence 556788764468999999999999999999999999999999999999999999997 899999999987542110 11
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
............++..|..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++.+ +|..
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~~~~-vG~~ 158 (262)
T PRK07468 80 ATRIEEARRLAMMLKALNDLPKPLIGRIQGQAFGGGVGLISVCDVAIAVSGARFGLTETRLGLIPATISPYVVAR-MGEA 158 (262)
T ss_pred hhHHHHHHHHHHHHHHHHcCCCCEEEEECCEEEhHHHHHHHhCCEEEEeCCCEEeCchhccCCCcccchhhHHhh-ccHH
Confidence 111112333455778899999999999999999999999999999999999999999999999999999986654 8998
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||++++ |+||+++|||++++|++++.+.+.+++
T Consensus 159 -~a~~lll~g~~~~-a~eA~~~Glv~~v~~~~~l~~~~~~~a-------------------------------------- 198 (262)
T PRK07468 159 -NARRVFMSARLFD-AEEAVRLGLLSRVVPAERLDAAVEAEV-------------------------------------- 198 (262)
T ss_pred -HHHHHHHhCCccC-HHHHHHcCCcceecCHHHHHHHHHHHH--------------------------------------
Confidence 9999999999999 999999999999999877765444433
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
++|++.||.+++.+|++++... ...+++.++.|...+
T Consensus 199 ----------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~ 235 (262)
T PRK07468 199 ----------------------------------TPYLSCAPGAVAAAKALVRALG---------APIDEAVIDATIEAL 235 (262)
T ss_pred ----------------------------------HHHHhcCHHHHHHHHHHHHhhh---------ccChHHHHHHHHHHH
Confidence 3489999999999999998765 456789999999999
Q ss_pred HHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 385 LRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
...+.++|++||+++|+ ++++|+|
T Consensus 236 ~~~~~s~d~~e~~~af~--~kr~~~~ 259 (262)
T PRK07468 236 ADTWETEEAREGIAAFF--DKRAPAW 259 (262)
T ss_pred HHHhcCHHHHHHHHHHH--cCCCCCC
Confidence 99999999999999999 6777876
No 32
>PRK05674 gamma-carboxygeranoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.4e-52 Score=403.94 Aligned_cols=258 Identities=22% Similarity=0.275 Sum_probs=218.9
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.|++|.++.++++|++||||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... ...
T Consensus 3 ~~~~l~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~al~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~~-~~~ 80 (265)
T PRK05674 3 DFQTIELIRDPRGFATLWLSRADKNNAFNAQMIRELILALDQVQSDASLRFLLLRGRG-RHFSAGADLAWMQQSAD-LDY 80 (265)
T ss_pred CcceEEEEEcCCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCcccCcCHHHHhhccc-ccc
Confidence 4778888864478999999999999999999999999999999999999999999998 89999999998753210 000
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
... .........++..+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++ +++++|.
T Consensus 81 ~~~-~~~~~~~~~~~~~l~~~~kPvIaaV~G~a~GgG~~lal~~D~~ia~~~a~f~~pe~~~Gi~p~~~~~~-l~~~vG~ 158 (265)
T PRK05674 81 NTN-LDDARELAELMYNLYRLKIPTLAVVQGAAFGGALGLISCCDMAIGADDAQFCLSEVRIGLAPAVISPF-VVKAIGE 158 (265)
T ss_pred hhh-hHHHHHHHHHHHHHHcCCCCEEEEEcCEEEechhhHhhhcCEEEEeCCCEEeCcccccCCCcchhHHH-HHHHhCH
Confidence 011 11223345677789999999999999999999999999999999999999999999999999887664 8899999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|+|||+.|+ |+||+++|||++|||++++.+.+.++++
T Consensus 159 ~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------ 200 (265)
T PRK05674 159 R-AARRYALTAERFD-GRRARELGLLAESYPAAELEAQVEAWIA------------------------------------ 200 (265)
T ss_pred H-HHHHHHHhCcccC-HHHHHHCCCcceecCHHHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999998877654444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHH-HHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKY-EYR 382 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~-e~~ 382 (414)
+|+++||.+++.+|+.++... ..++.+.++. +..
T Consensus 201 ------------------------------------~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~~~~ 235 (265)
T PRK05674 201 ------------------------------------NLLLNSPQALRASKDLLREVG---------DGELSPALRRYCEN 235 (265)
T ss_pred ------------------------------------HHHhcCHHHHHHHHHHHHHhh---------ccChhHHHHHHHHH
Confidence 489999999999999999876 5667788765 446
Q ss_pred HHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 383 VALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 383 ~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+...+.++|++||+++|+ ++++|+|
T Consensus 236 ~~~~~~~s~d~~e~~~af~--~kr~p~~ 261 (265)
T PRK05674 236 AIARIRVSAEGQEGLRAFL--EKRTPAW 261 (265)
T ss_pred HHHHHhcCHHHHHHHHHHH--ccCCCCC
Confidence 6777889999999999999 6677776
No 33
>PRK05995 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-52 Score=402.67 Aligned_cols=258 Identities=21% Similarity=0.279 Sum_probs=222.0
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
|.++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.......
T Consensus 1 ~~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~- 77 (262)
T PRK05995 1 MMYETLEIEQ-RGQVATVTLNRPDVRNAFNETVIAELTAAFRALDADDSVRAVVLAGAG-KAFCAGADLNWMKKMAGYS- 77 (262)
T ss_pred CCCceEEEEe-eCCEEEEEEcCcccccCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CccccCcCHHHHhhhcccC-
Confidence 3466788886 789999999999999999999999999999999999999999999998 8999999999875421111
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
.............++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++ |++++|
T Consensus 78 -~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~-l~~~vg 155 (262)
T PRK05995 78 -DDENRADARRLADMLRAIYRCPKPVIARVHGDAYAGGMGLVAACDIAVAADHAVFCLSEVRLGLIPATISPY-VIRAMG 155 (262)
T ss_pred -chhhhhHHHHHHHHHHHHHcCCCCEEEEECCEEEhhHHHHHHhCCEEEeeCCCEEeCcccccccCccchHHH-HHHHhC
Confidence 111111223445677889999999999999999999999999999999999999999999999999888765 889999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||++++ |+||+++||||+|||++++.+.+.++++
T Consensus 156 ~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~----------------------------------- 198 (262)
T PRK05995 156 ER-AARRYFLTAERFD-AAEALRLGLVHEVVPAEALDAKVDELLA----------------------------------- 198 (262)
T ss_pred HH-HHHHHHHcCCccC-HHHHHHcCCCCeecCHHHHHHHHHHHHH-----------------------------------
Confidence 98 9999999999999 9999999999999998877655444433
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHH-HHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGV-MKYEY 381 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~-l~~e~ 381 (414)
+|++.||.+++.+|+.++... ..++.+. ++.|.
T Consensus 199 -------------------------------------~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~~e~ 232 (262)
T PRK05995 199 -------------------------------------ALVANSPQAVRAGKRLVRDVA---------GRPIDAALIADTA 232 (262)
T ss_pred -------------------------------------HHHhCCHHHHHHHHHHHHhhh---------cCChhhHHHHHHH
Confidence 489999999999999999765 4578888 88888
Q ss_pred HHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 382 RVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 382 ~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
..+...+.++|++||+++|+ ++++|+|
T Consensus 233 ~~~~~~~~~~d~~e~~~af~--~kr~p~~ 259 (262)
T PRK05995 233 SRIALIRATEEAREGVAAFL--EKRKPAW 259 (262)
T ss_pred HHHHHHhcCHHHHHHHHHHh--cCCCCCC
Confidence 88888999999999999999 6777775
No 34
>TIGR03210 badI 2-ketocyclohexanecarboxyl-CoA hydrolase. Members of this protein family are 2-ketocyclohexanecarboxyl-CoA hydrolase, a ring-opening enzyme that acts in catabolism of molecules such as benzoyl-CoA and cyclohexane carboxylate. It converts -ketocyclohexanecarboxyl-CoA to pimelyl-CoA. It is not sensitive to oxygen.
Probab=100.00 E-value=1.7e-52 Score=401.43 Aligned_cols=255 Identities=18% Similarity=0.181 Sum_probs=214.5
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
|+.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++... . .
T Consensus 1 ~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g~~~F~aG~Dl~~~~~~---~-~- 74 (256)
T TIGR03210 1 YEDILYEK-RNGIAWIMINRPAKMNAFRGQTCDELIHALKDAGYDRQIGVIVLAGAGDKAFCTGGDQSTHDGG---Y-D- 74 (256)
T ss_pred CCceEEEe-eCCEEEEEEcCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcChHHHhcc---c-c-
Confidence 34577876 7899999999999999999999999999999999999999999999986799999999987421 0 1
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
. ...+......++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|+++++++|++++|..
T Consensus 75 ~-~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~~~~~~~~~l~~~vG~~ 153 (256)
T TIGR03210 75 G-RGTIGLPMEELHSAIRDVPKPVIARVQGYAIGGGNVLVTICDLTIASEKAQFGQVGPKVGSVDPGYGTALLARVVGEK 153 (256)
T ss_pred c-hhHHHHHHHHHHHHHHhCCCCEEEEECCEEehhhHHHHHhCCEEEEeCCCEEecccccccccCCccHHHHHHHHhCHH
Confidence 1 111222334577789999999999999999999999999999999999999999999999998888899999999998
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||++++ |+||+++||||++||++++.+.+.++++
T Consensus 154 -~A~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------- 194 (256)
T TIGR03210 154 -KAREIWYLCRRYT-AQEALAMGLVNAVVPHDQLDAEVQKWCD------------------------------------- 194 (256)
T ss_pred -HHHHHHHhCCCcC-HHHHHHcCCceeeeCHHHHHHHHHHHHH-------------------------------------
Confidence 9999999999999 9999999999999998887665544433
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
+|++.||.+++.+|++++...+ ....+ +. .|...+
T Consensus 195 -----------------------------------~ia~~~~~a~~~~K~~l~~~~~-------~~~~~-~~--~~~~~~ 229 (256)
T TIGR03210 195 -----------------------------------EIVEKSPTAIAIAKRSFNMDTA-------HQRGI-AG--MGMYAL 229 (256)
T ss_pred -----------------------------------HHHhCCHHHHHHHHHHHHHhhc-------ccchH-HH--HHHHHH
Confidence 4999999999999999997641 01111 12 244566
Q ss_pred HHhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 385 LRSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
...+.++|++||+++|+ ++|+|+|-+
T Consensus 230 ~~~~~~~d~~e~~~af~--~kr~p~~~~ 255 (256)
T TIGR03210 230 KLYYDTAESREGVKAFQ--EKRKPEFRK 255 (256)
T ss_pred HHHccChhHHHHHHHHh--ccCCCCCCC
Confidence 77889999999999999 677888743
No 35
>TIGR01929 menB naphthoate synthase (dihydroxynaphthoic acid synthetase). This model represents an enzyme, naphthoate synthase (dihydroxynaphthoic acid synthetase), which is involved in the fifth step of the menaquinone biosynthesis pathway. Together with o-succinylbenzoate-CoA ligase (menE: TIGR01923), this enzyme takes 2-succinylbenzoate and converts it into 1,4-di-hydroxy-2-naphthoate. Included above the trusted cutoff are two enzymes from Arabadopsis thaliana and one from Staphylococcus aureus which are identified as putative enoyl-CoA hydratase/isomerases. These enzymes group with the naphthoate synthases when building a tree and when doing BLAST searches.
Probab=100.00 E-value=1.3e-52 Score=402.82 Aligned_cols=256 Identities=20% Similarity=0.195 Sum_probs=217.0
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++..+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.|+++||+|+|++++.... ......
T Consensus 3 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~--~~~~~~ 80 (259)
T TIGR01929 3 DIRYEKSTDGIAKITINRPQVRNAFRPLTVKEIIQALDDAREDPDIGVVILTGAGDKAFCSGGDQKVRGDYG--YIDDSG 80 (259)
T ss_pred eEEEEEcCCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEEeCCCCceEeCcChHhHhhcc--ccchhh
Confidence 466664368999999999999999999999999999999999999999999999867999999999764210 000110
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
. .......++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 81 ~--~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~~~~~~l~~~vG~~-~ 157 (259)
T TIGR01929 81 V--HRLNVLDVQRQIRTCPKPVIAMVNGYAIGGGHVLHVVCDLTIAAENARFGQTGPKVGSFDGGYGSSYLARIVGQK-K 157 (259)
T ss_pred H--HHHHHHHHHHHHHhCCCCEEEEEcCEEehHHHHHHHhCCEEEecCCCEecCcccccccCCCccHHHHHHHHhHHH-H
Confidence 0 111233566788999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++|||++|||++++.+.+.+++
T Consensus 158 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a---------------------------------------- 196 (259)
T TIGR01929 158 AREIWFLCRQYD-AEQALDMGLVNTVVPLADLEKETVRWC---------------------------------------- 196 (259)
T ss_pred HHHHHHhCCccC-HHHHHHcCCcccccCHHHHHHHHHHHH----------------------------------------
Confidence 999999999999 999999999999999887765444433
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
++|++.||.+++.+|++++... . ...+..+.|.+.+..
T Consensus 197 --------------------------------~~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~~~~ 234 (259)
T TIGR01929 197 --------------------------------REILQKSPMAIRMLKAALNADC---------D-GQAGLQELAGNATML 234 (259)
T ss_pred --------------------------------HHHHhCCHHHHHHHHHHHHhhh---------c-cchHHHHHHHHHHHH
Confidence 3599999999999999999764 2 234556667788888
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
.+.++|++|||++|+ ++|+|+|-+
T Consensus 235 ~~~~~d~~egi~af~--~kr~p~~~~ 258 (259)
T TIGR01929 235 FYMTEEGQEGRNAFL--EKRQPDFSK 258 (259)
T ss_pred HhcCccHHHHHHHHh--ccCCCCCCC
Confidence 899999999999999 778888754
No 36
>PRK08258 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-52 Score=405.32 Aligned_cols=256 Identities=21% Similarity=0.290 Sum_probs=223.8
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++. +++|++|+||||++.|+|+.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..... ......
T Consensus 18 ~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~eL~~~l~~~~~d~~vr~vVltg~g-~~FsaG~Dl~~~~~~~~-~~~~~~ 94 (277)
T PRK08258 18 HFLWEV-DDGVATITLNRPERKNPLTFESYAELRDLFRELVYADDVKAVVLTGAG-GNFCSGGDVHEIIGPLT-KMDMPE 94 (277)
T ss_pred ceEEEE-ECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEeCCC-CCcccccCHHHHhcccc-ccChhH
Confidence 677876 799999999999999999999999999999999999999999999997 89999999998743211 111111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCC-ChhHHHHHhhCCCcHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-DVGFSYIAAKGPGGGS 225 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P-~~g~~~~L~r~~G~~~ 225 (414)
...+......++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++| ++|++++|++++|..
T Consensus 95 ~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~vG~~- 173 (277)
T PRK08258 95 LLAFTRMTGDLVKAMRACPQPIIAAVDGVCAGAGAILAMASDLRLGTPSAKTAFLFTRVGLAGADMGACALLPRIIGQG- 173 (277)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEEeccccccCcCCCCchHHHHHHHHhCHH-
Confidence 222333345678889999999999999999999999999999999999999999999999995 789999999999998
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
++++|++||++++ |+||+++||||+++|++++.+.+.+++
T Consensus 174 ~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a--------------------------------------- 213 (277)
T PRK08258 174 RASELLYTGRSMS-AEEGERWGFFNRLVEPEELLAEAQALA--------------------------------------- 213 (277)
T ss_pred HHHHHHHcCCCCC-HHHHHHcCCCcEecCHHHHHHHHHHHH---------------------------------------
Confidence 9999999999999 999999999999999887765444443
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
++|++.||.+++.+|++++... ..++++.++.|...+.
T Consensus 214 ---------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~ 251 (277)
T PRK08258 214 ---------------------------------RRLAAGPTFAHGMTKTMLHQEW---------DMGLEEAIEAEAQAQA 251 (277)
T ss_pred ---------------------------------HHHHhCCHHHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHH
Confidence 3499999999999999999875 5679999999999999
Q ss_pred HhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 386 RSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.++.++|++||+++|+ ++++|+|
T Consensus 252 ~~~~s~d~~eg~~af~--ekr~p~~ 274 (277)
T PRK08258 252 ICMQTEDFRRAYEAFV--AKRKPVF 274 (277)
T ss_pred HHhcCchHHHHHHHHh--cCCCCCC
Confidence 9999999999999999 6777775
No 37
>PRK05981 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2e-52 Score=403.23 Aligned_cols=261 Identities=23% Similarity=0.353 Sum_probs=225.5
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC-CceEEEEEeCCCCCccCCCChhhHHHHhhhC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDP-RVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~-~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~ 141 (414)
|.|+.+.++. +++|++|+||||+++|++|.+|+.+|.++++.++.|+ ++++|||+|.| ++||+|+|++++.......
T Consensus 1 ~~~~~v~~~~-~~~i~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~~v~vvvl~g~g-~~F~aG~Dl~~~~~~~~~~ 78 (266)
T PRK05981 1 MQFKKVTLDF-DGGVAILTLDHPEVMNAVSIDMLGGLAEALDAIEDGKAEVRCLVLTGAG-RGFCTGANLQGRGSGGRES 78 (266)
T ss_pred CCcceEEEEe-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCcccccCHHhhhcccccc
Confidence 4577888886 7899999999999999999999999999999999876 49999999997 8999999999875321000
Q ss_pred C-CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhC
Q 015014 142 R-NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG 220 (414)
Q Consensus 142 ~-~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~ 220 (414)
. .......+......++.+|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~~e~~lG~~p~~g~~~~l~~~ 158 (266)
T PRK05981 79 DSGGDAGAALETAYHPFLRRLRNLPCPIVTAVNGPAAGVGMSFALMGDLILCARSAYFLQAFRRIGLVPDGGSTWLLPRL 158 (266)
T ss_pred cccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEecCCCEEechHhhcCCCCCccHHHHHHHH
Confidence 0 001112233334567788999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHH
Q 015014 221 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLP 300 (414)
Q Consensus 221 ~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 300 (414)
+|.. ++++|++||+.++ |+||+++|||++++|++++.+.+.+++
T Consensus 159 vg~~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~~~~a~~~a---------------------------------- 202 (266)
T PRK05981 159 VGKA-RAMELSLLGEKLP-AETALQWGLVNRVVDDAELMAEAMKLA---------------------------------- 202 (266)
T ss_pred hHHH-HHHHHHHhCCCcC-HHHHHHcCCceEeeCHhHHHHHHHHHH----------------------------------
Confidence 9998 9999999999999 999999999999999888765443333
Q ss_pred HHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHH
Q 015014 301 QITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE 380 (414)
Q Consensus 301 ~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e 380 (414)
++|++.||.+++.+|++++... ..++.+.++.|
T Consensus 203 --------------------------------------~~l~~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e 235 (266)
T PRK05981 203 --------------------------------------HELANGPTVALGLIRKLYWDSP---------ENDFEEQLNLE 235 (266)
T ss_pred --------------------------------------HHHHcCCHHHHHHHHHHHHHhh---------hcCHHHHHHHH
Confidence 2488999999999999998875 56799999999
Q ss_pred HHHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 381 YRVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 381 ~~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
...+..++.++|++||+.+|+ ++++|+|
T Consensus 236 ~~~~~~~~~s~d~~e~~~af~--~kr~~~~ 263 (266)
T PRK05981 236 REAQRIAGKTEDFKEGVGAFL--QKRPAQF 263 (266)
T ss_pred HHHHHHHhcChhHHHHHHHHh--cCCCCCC
Confidence 999999999999999999999 6777775
No 38
>PRK06210 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-52 Score=405.16 Aligned_cols=263 Identities=25% Similarity=0.335 Sum_probs=224.5
Q ss_pred CCCccEEEEEecC-cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhC
Q 015014 63 GAEEFVKGNVHPN-GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (414)
Q Consensus 63 ~~~~~v~~~~~~~-~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~ 141 (414)
|.|+.+.++. ++ +|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.......
T Consensus 2 ~~~~~i~~~~-~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~~~~ 79 (272)
T PRK06210 2 MAYDAVLYEV-ADSGVAVITLNRPDRLNAWTPVMEAEVYAAMDRAEADPAVRVIVLTGAG-RGFCAGADMGELQTIDPSD 79 (272)
T ss_pred CCcceEEEEE-CCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHhccCCCeeEEEEECCC-CCcccccCHHHHhccCccc
Confidence 4567788887 67 9999999999999999999999999999999999999999999997 8999999999875421100
Q ss_pred CC-CCchHHHH----HHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHH
Q 015014 142 RN-TPLVPKVF----TAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYI 216 (414)
Q Consensus 142 ~~-~~~~~~~~----~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~ 216 (414)
.. ......+. ....+++..|.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~ 159 (272)
T PRK06210 80 GRRDTDVRPFVGNRRPDYQTRYHFLTALRKPVIAAINGACAGIGLTHALMCDVRFAADGAKFTTAFARRGLIAEHGISWI 159 (272)
T ss_pred ccccccchhhhhhhhhhHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEeCCCEEechHHhcCCCCCCchhhh
Confidence 00 00001111 11234567889999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhh
Q 015014 217 AAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLK 296 (414)
Q Consensus 217 L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 296 (414)
|++++|.. ++++|++||+.++ |+||+++||||+++|++++.+.+.++++
T Consensus 160 l~~~ig~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~----------------------------- 208 (272)
T PRK06210 160 LPRLVGHA-NALDLLLSARTFY-AEEALRLGLVNRVVPPDELMERTLAYAE----------------------------- 208 (272)
T ss_pred hHhhhCHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHHHHHH-----------------------------
Confidence 99999998 9999999999999 9999999999999998777654433332
Q ss_pred hhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHhhcCCCCcccCCHHH
Q 015014 297 LLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVASAHGKTDNELSKLSG 375 (414)
Q Consensus 297 ~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~-sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~ 375 (414)
+|++. ||.+++.+|+.+++.. ..++++
T Consensus 209 -------------------------------------------~i~~~~~p~a~~~~K~~l~~~~---------~~~l~~ 236 (272)
T PRK06210 209 -------------------------------------------DLARNVSPASMAVIKRQLYEDA---------FQTLAE 236 (272)
T ss_pred -------------------------------------------HHHhcCCHHHHHHHHHHHHhcc---------cCCHHH
Confidence 48875 9999999999999865 567999
Q ss_pred HHHHHHHHHHHhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 376 VMKYEYRVALRSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 376 ~l~~e~~~~~~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
.++.|...+...+.++|++|||++|+ ++++|.|..
T Consensus 237 ~~~~e~~~~~~~~~~~~~~egi~af~--~kr~p~~~~ 271 (272)
T PRK06210 237 ATARANREMHESLQRPDFIEGVASFL--EKRPPRFPG 271 (272)
T ss_pred HHHHHHHHHHHHhcCccHHHHHHHHh--ccCCCCCCC
Confidence 99999999999999999999999999 677888754
No 39
>PRK07511 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.7e-52 Score=400.08 Aligned_cols=254 Identities=22% Similarity=0.303 Sum_probs=224.6
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCch
Q 015014 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (414)
Q Consensus 68 v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (414)
+.++. +++|++|+||||++.|++|.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++.... .......
T Consensus 5 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVl~g~g-~~F~~G~Dl~~~~~~~--~~~~~~~ 80 (260)
T PRK07511 5 LLSRR-EGSTLVLTLSNPGARNALHPDMYAAGIEALNTAERDPSIRAVVLTGAG-GFFCAGGNLNRLLENR--AKPPSVQ 80 (260)
T ss_pred eEEEe-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHhccCCCeEEEEEECCC-CCcccCcCHHHHhhcc--cccchhH
Confidence 66775 799999999999999999999999999999999999999999999997 8999999999875421 0111222
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHH
Q 015014 148 PKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 227 (414)
Q Consensus 148 ~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a 227 (414)
..++...++++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.+ ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~kpvIAav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~-~a 159 (260)
T PRK07511 81 AASIDGLHDWIRAIRAFPKPVIAAVEGAAAGAGFSLALACDLLVAARDAKFVMAYVKVGLTPDGGGSWFLARALPRQ-LA 159 (260)
T ss_pred HHHHHHHHHHHHHHHcCCCCEEEEECCeeehHHHHHHHhCCEEEeeCCCEEeccccccCcCCCchHHHHHHHHhCHH-HH
Confidence 33455566788899999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcC
Q 015014 228 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 307 (414)
Q Consensus 228 ~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 307 (414)
++|++||++++ |+||+++||||+|||++++.+.+.+++
T Consensus 160 ~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~~~~a~~~a----------------------------------------- 197 (260)
T PRK07511 160 TELLLEGKPIS-AERLHALGVVNRLAEPGQALAEALALA----------------------------------------- 197 (260)
T ss_pred HHHHHhCCCCC-HHHHHHcCCccEeeCchHHHHHHHHHH-----------------------------------------
Confidence 99999999999 999999999999999887755433332
Q ss_pred CcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHh
Q 015014 308 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 387 (414)
Q Consensus 308 ~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~ 387 (414)
++|+++||.+++.+|+.++... ..++.++++.|...+...
T Consensus 198 -------------------------------~~l~~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~~ 237 (260)
T PRK07511 198 -------------------------------DQLAAGSPNALARIKSLIADAP---------EATLAAQLEAERDHFVAS 237 (260)
T ss_pred -------------------------------HHHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHHHHH
Confidence 2489999999999999999876 568999999999999999
Q ss_pred CCCchHHHHHHhhHhCCCCCCCC
Q 015014 388 SLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 388 ~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+.++|++|||++|+ ++++|+|
T Consensus 238 ~~~~~~~~~i~~f~--~~r~~~~ 258 (260)
T PRK07511 238 LHHADALEGIAAFL--EKRAPDY 258 (260)
T ss_pred hcCchHHHHHHHHh--ccCCCCC
Confidence 99999999999999 6677775
No 40
>PRK07327 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.6e-52 Score=401.73 Aligned_cols=257 Identities=19% Similarity=0.230 Sum_probs=217.8
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.|+.|.++.++++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||||.| ++||+|+|++++.... ..
T Consensus 9 ~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~---~~ 84 (268)
T PRK07327 9 DYPALRFDRPPPGVLEIVLNGPGALNAADARMHRELADIWRDVDRDPDVRVVLIRGEG-KAFSAGGDLALVEEMA---DD 84 (268)
T ss_pred CCCeEEEEecCCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhhhCCCceEEEEECCC-CCcccccCHHHHhhcc---Cc
Confidence 4677888864688999999999999999999999999999999999999999999998 8999999999875421 11
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
......++.....++..|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|.
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG~ 164 (268)
T PRK07327 85 FEVRARVWREARDLVYNVINCDKPIVSAIHGPAVGAGLVAALLADISIAAKDARIIDGHTRLGVAAGDHAAIVWPLLCGM 164 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeehhhHHHHhCCEEEecCCCEEeCcccccCCCCCcchhhHHHHHhCH
Confidence 11122344445567888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||++++ |+||+++|||++++|++++.+.+.++++
T Consensus 165 ~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------ 206 (268)
T PRK07327 165 A-KAKYYLLLCEPVS-GEEAERIGLVSLAVDDDELLPKALEVAE------------------------------------ 206 (268)
T ss_pred H-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999998887665544433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|++.||.+++.+|++++..... ....+++.+..|.
T Consensus 207 ------------------------------------~la~~~~~a~~~~K~~l~~~~~~------~~~~~~~~~~~~~-- 242 (268)
T PRK07327 207 ------------------------------------RLAAGSQTAIRWTKYALNNWLRM------AGPTFDTSLALEF-- 242 (268)
T ss_pred ------------------------------------HHHcCCHHHHHHHHHHHHHhhhh------hhhhHHHHHHHHH--
Confidence 49999999999999999975300 0123555555443
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
..+.++|++||+.+|+ ++++|+|
T Consensus 243 --~~~~~~d~~eg~~af~--ekr~p~~ 265 (268)
T PRK07327 243 --MGFSGPDVREGLASLR--EKRAPDF 265 (268)
T ss_pred --HHccChhHHHHHHHHH--hcCCCCC
Confidence 3678999999999999 6778886
No 41
>PLN02888 enoyl-CoA hydratase
Probab=100.00 E-value=6.1e-52 Score=399.31 Aligned_cols=254 Identities=20% Similarity=0.285 Sum_probs=220.0
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
.+.+.|.++..+++|++||||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.....
T Consensus 6 ~~~~~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~--- 81 (265)
T PLN02888 6 VSENLILVPKSRNGIATITINRPKALNALTRPMMVELAAAFKRLDEDDSVKVIILTGSG-RAFCSGVDLTAAEEVFK--- 81 (265)
T ss_pred CCCCeEEEEeccCCEEEEEEcCCCcccCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CcccCCCCHHHHHhhcc---
Confidence 45677888754789999999999999999999999999999999999999999999998 89999999998653210
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
.. .. .....++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|
T Consensus 82 -~~-~~---~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vG 156 (265)
T PLN02888 82 -GD-VK---DVETDPVAQMERCRKPIIGAINGFAITAGFEIALACDILVASRGAKFIDTHAKFGIFPSWGLSQKLSRIIG 156 (265)
T ss_pred -ch-hh---HHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEecCCCEecCccccccCCCCccHhhHHHHHhC
Confidence 01 11 11234566789999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||++++ |+||+++||||++||++++.+.+.+++
T Consensus 157 ~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------ 198 (265)
T PLN02888 157 AN-RAREVSLTAMPLT-AETAERWGLVNHVVEESELLKKAREVA------------------------------------ 198 (265)
T ss_pred HH-HHHHHHHhCCccC-HHHHHHcCCccEeeChHHHHHHHHHHH------------------------------------
Confidence 98 9999999999999 999999999999999887765444433
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
++|++.+|.+++.+|++++... ..+++++++.|..
T Consensus 199 ------------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~ 233 (265)
T PLN02888 199 ------------------------------------EAIIKNNQGMVLRYKSVINDGL---------KLDLGHALQLEKE 233 (265)
T ss_pred ------------------------------------HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHH
Confidence 3599999999999999999876 5678999999988
Q ss_pred HHHHhC--CCchHHHHHHhhHhCCCCCCCC
Q 015014 383 VALRSS--LRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 383 ~~~~~~--~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+..++ .++|++||+++|+ ++++|+.
T Consensus 234 ~~~~~~~~~~~d~~e~~~af~--ekr~~~~ 261 (265)
T PLN02888 234 RAHDYYNGMTKEQFQKMQEFI--AGRSSKK 261 (265)
T ss_pred HHHHHhccCCHHHHHHHHHHH--hcCCCCC
Confidence 777764 5999999999999 5566654
No 42
>PRK03580 carnitinyl-CoA dehydratase; Provisional
Probab=100.00 E-value=6.6e-52 Score=398.48 Aligned_cols=251 Identities=21% Similarity=0.332 Sum_probs=218.0
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++. +++|++||||||+ .|++|.+|+.+|.++++.++.|++||+|||+|.|+++||+|+|++++.... ...
T Consensus 4 ~i~~~~-~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g~~~F~aG~Dl~~~~~~~---~~~-- 76 (261)
T PRK03580 4 SLHTTR-NGSILEITLDRPK-ANAIDAKTSFAMGEVFLNFRDDPELRVAIITGAGEKFFSAGWDLKAAAEGE---APD-- 76 (261)
T ss_pred eEEEEE-ECCEEEEEECCcc-ccCCCHHHHHHHHHHHHHHHhCCCcEEEEEEeCCCCceecccCHHHHhccC---cch--
Confidence 367776 7899999999996 599999999999999999999999999999999867999999999875311 110
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
..+....+..+.++..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 -~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~vg~~-~ 154 (261)
T PRK03580 77 -ADFGPGGFAGLTEIFDLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFALPEAKLGIVPDSGGVLRLPKRLPPA-I 154 (261)
T ss_pred -hhhhhhhhHHHHHHHhCCCCEEEEECCeeehHHHHHHHHCCEEEecCCCEEeCcccccCcCCCccHHHHHHHHhCHH-H
Confidence 11222223456788999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
++++++||+.++ |+||+++|||++++|++++.+.+.++++
T Consensus 155 a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~--------------------------------------- 194 (261)
T PRK03580 155 ANEMVMTGRRMD-AEEALRWGIVNRVVPQAELMDRARELAQ--------------------------------------- 194 (261)
T ss_pred HHHHHHhCCccC-HHHHHHcCCCcEecCHhHHHHHHHHHHH---------------------------------------
Confidence 999999999999 9999999999999998887665444433
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH----
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR---- 382 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~---- 382 (414)
+|++.||.+++.+|++++... ..+++++++.|..
T Consensus 195 ---------------------------------~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~~ 232 (261)
T PRK03580 195 ---------------------------------QLVNSAPLAIAALKEIYRETS---------EMPVEEAYRYIRSGVLK 232 (261)
T ss_pred ---------------------------------HHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHhhhHH
Confidence 489999999999999999876 5678999998864
Q ss_pred HHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 383 VALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 383 ~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+...+.++|++||+++|+ ++++|+|
T Consensus 233 ~~~~~~~~~d~~e~~~af~--ekr~~~~ 258 (261)
T PRK03580 233 HYPSVLHSEDALEGPRAFA--EKRDPVW 258 (261)
T ss_pred HHHHHhcCccHHHHHHHHh--cCCCCCC
Confidence 6677889999999999999 6677775
No 43
>PRK07659 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4.9e-52 Score=399.16 Aligned_cols=253 Identities=26% Similarity=0.354 Sum_probs=223.6
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
++.+.++. +++|++|+||||++.|++|.+|+.+|.++++.+ .|+++++|||+|.| ++||+|+|++++.... ..
T Consensus 5 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~-~d~~vrvvvl~g~g-~~F~aG~Dl~~~~~~~----~~ 77 (260)
T PRK07659 5 MESVVVKY-EGRVATIMLNRPEALNALDEPMLKELLQALKEV-AESSAHIVVLRGNG-RGFSAGGDIKMMLSSN----DE 77 (260)
T ss_pred CceEEEEe-eCCEEEEEeCCcccccCCCHHHHHHHHHHHHHh-cCCCeeEEEEECCC-CCcccccCHHHHhhcc----Cc
Confidence 45588886 799999999999999999999999999999999 58899999999997 8999999999875311 11
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
.....++...++++.++..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~pvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~L~~~vg~~ 157 (260)
T PRK07659 78 SKFDGVMNTISEIVVTLYTMPKLTISAIHGPAAGLGLSIALTADYVIADISAKLAMNFIGIGLIPDGGGHFFLQKRVGEN 157 (260)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCCEEEEecCceecHHHHHHHhCCEEEEcCCCEEcCchhhcCCCCCCchhhhHHHhcCHH
Confidence 22334555566778889999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||+.++ |+||+++||||++| ++++.+.+.+++
T Consensus 158 -~a~~l~ltg~~~~-a~eA~~~Glv~~vv-~~~~~~~a~~~a-------------------------------------- 196 (260)
T PRK07659 158 -KAKQIIWEGKKLS-ATEALDLGLIDEVI-GGDFQTAAKQKI-------------------------------------- 196 (260)
T ss_pred -HHHHHHHhCCccC-HHHHHHcCChHHHh-hhHHHHHHHHHH--------------------------------------
Confidence 9999999999999 99999999999999 677755443333
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
++|++.||.+++.+|++++... ..++++.++.|...+
T Consensus 197 ----------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~ 233 (260)
T PRK07659 197 ----------------------------------SEWLQKPLKAMIETKQIYCELN---------RSQLEQVLQLEKRAQ 233 (260)
T ss_pred ----------------------------------HHHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHH
Confidence 3589999999999999999875 567999999999999
Q ss_pred HHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 385 LRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
...+.++|++|||.+|+ ++|+|+|
T Consensus 234 ~~~~~~~~~~egi~af~--~kr~p~~ 257 (260)
T PRK07659 234 YAMRQTADHKEGIRAFL--EKRLPVF 257 (260)
T ss_pred HHHhcCHhHHHHHHHHh--cCCCCCC
Confidence 99999999999999999 6777875
No 44
>PRK11423 methylmalonyl-CoA decarboxylase; Provisional
Probab=100.00 E-value=6e-52 Score=398.63 Aligned_cols=256 Identities=16% Similarity=0.195 Sum_probs=221.5
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CCCccCCCChhhHHHHhhhC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSG-PRAFCAGMDIKGVVAEIQKD 141 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g-~~~FcaG~Dl~~~~~~~~~~ 141 (414)
|+++.+.++. +++|++||||||+++|+||.+|+.+|.++++.+++|+ +++|||+|.| +++||+|+|++++....
T Consensus 1 ~~~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~-v~~vvltg~~~~~~FcaG~Dl~~~~~~~--- 75 (261)
T PRK11423 1 MSMQYVNVVT-INKIATITFNNPAKRNALSKVLIDDLMQALSDLNRPE-IRVVILRAPSGSKVWSAGHDIHELPSGG--- 75 (261)
T ss_pred CCccceEEEe-ECCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCC-ceEEEEECCCCCCeeECCcCHHHHhhcc---
Confidence 4567788887 7999999999999999999999999999999999988 9999999964 48999999999874311
Q ss_pred CCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCC
Q 015014 142 RNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGP 221 (414)
Q Consensus 142 ~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~ 221 (414)
.+ ...+......++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|+++++++++
T Consensus 76 --~~-~~~~~~~~~~l~~~i~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~~~~g~~~~l~~~v 152 (261)
T PRK11423 76 --RD-PLSYDDPLRQILRMIQKFPKPVIAMVEGSVWGGAFELIMSCDLIIAASTSTFAMTPANLGVPYNLSGILNFTNDA 152 (261)
T ss_pred --cc-HHHHHHHHHHHHHHHHhCCCCEEEEEecEEechHHHHHHhCCEEEecCCCEecCchhhcCCCCCccHHHHHHHHh
Confidence 01 122334445678889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHH
Q 015014 222 GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ 301 (414)
Q Consensus 222 G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (414)
|.. ++++|++||++++ |+||+++||||+|||++++++.+.++
T Consensus 153 g~~-~a~~l~l~g~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~------------------------------------ 194 (261)
T PRK11423 153 GFH-IVKEMFFTASPIT-AQRALAVGILNHVVEVEELEDFTLQM------------------------------------ 194 (261)
T ss_pred HHH-HHHHHHHcCCCcC-HHHHHHcCCcCcccCHHHHHHHHHHH------------------------------------
Confidence 998 9999999999999 99999999999999988776544443
Q ss_pred HHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCH-HHHHHHH
Q 015014 302 ITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL-SGVMKYE 380 (414)
Q Consensus 302 i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l-~~~l~~e 380 (414)
+++|++.||.+++.+|+.++... ....+ .+.++.|
T Consensus 195 ------------------------------------a~~l~~~~~~a~~~~K~~~~~~~--------~~~~~~~~~~~~~ 230 (261)
T PRK11423 195 ------------------------------------AHHISEKAPLAIAVIKEQLRVLG--------EAHPMNPDEFERI 230 (261)
T ss_pred ------------------------------------HHHHHhcCHHHHHHHHHHHHhhc--------ccCCcchHHHHHH
Confidence 34599999999999999998653 11233 6788889
Q ss_pred HHHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 381 YRVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 381 ~~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
......++.++|++||+.+|+ ++++|+|
T Consensus 231 ~~~~~~~~~s~d~~eg~~af~--~kr~p~~ 258 (261)
T PRK11423 231 QGLRRAVYDSEDYQEGMNAFL--EKRKPVF 258 (261)
T ss_pred HHHHHHHhCChhHHHHHHHHh--ccCCCCC
Confidence 899899999999999999999 6677775
No 45
>PRK05864 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.5e-52 Score=400.77 Aligned_cols=263 Identities=22% Similarity=0.280 Sum_probs=219.4
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC-
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR- 142 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~- 142 (414)
.++.|.++..+++|++|+||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++......+.
T Consensus 7 ~~~~v~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vrvvVl~g~g-~~FcaG~Dl~~~~~~~~~~~~ 85 (276)
T PRK05864 7 TMSLVLVDHPRPEIALITLNRPERMNSMAFDVMVPLKEALAEVSYDNSVRVVVLTGAG-RGFSSGADHKSAGVVPHVEGL 85 (276)
T ss_pred CCCceEEeeecCCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeecCcchhhhhcccccccc
Confidence 3566777754689999999999999999999999999999999999999999999987 89999999998743110000
Q ss_pred -CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCC-ChhHHHHHhhC
Q 015014 143 -NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFP-DVGFSYIAAKG 220 (414)
Q Consensus 143 -~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P-~~g~~~~L~r~ 220 (414)
........+.....++..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++|++| ++|++++|+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~~g~~~~l~~~ 165 (276)
T PRK05864 86 TRPTYALRSMELLDDVILALRRLHQPVIAAVNGPAIGGGLCLALAADIRVASSSAYFRAAGINNGLTASELGLSYLLPRA 165 (276)
T ss_pred cchhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehhHHHHHHhCCEEEeeCCCEecCcccccCCCCCCcchheehHhh
Confidence 0111112233345567788999999999999999999999999999999999999999999999997 78999999999
Q ss_pred CCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHH
Q 015014 221 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLP 300 (414)
Q Consensus 221 ~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 300 (414)
+|.. ++++|++||++++ |+||+++|||++++|++++.+.+.++++
T Consensus 166 vG~~-~A~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~--------------------------------- 210 (276)
T PRK05864 166 IGSS-RAFEIMLTGRDVD-AEEAERIGLVSRQVPDEQLLDTCYAIAA--------------------------------- 210 (276)
T ss_pred hCHH-HHHHHHHcCCccC-HHHHHHcCCcceeeCHHHHHHHHHHHHH---------------------------------
Confidence 9998 9999999999999 9999999999999998887654444433
Q ss_pred HHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccC-CHHHHHHH
Q 015014 301 QITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELS-KLSGVMKY 379 (414)
Q Consensus 301 ~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~-~l~~~l~~ 379 (414)
+|++.||.+++.+|+.++... .. ++++.+..
T Consensus 211 ---------------------------------------~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~ 242 (276)
T PRK05864 211 ---------------------------------------RMAGFSRPGIELTKRTLWSGL---------DAASLEAHMQA 242 (276)
T ss_pred ---------------------------------------HHHhCCHHHHHHHHHHHHhhc---------ccCCHHHHHHH
Confidence 489999999999999998764 33 68888888
Q ss_pred HHHHHH-HhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 380 EYRVAL-RSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 380 e~~~~~-~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
|..... ..+.++|++||+++|+ ++++|+|-+
T Consensus 243 e~~~~~~~~~~~~d~~e~~~af~--~kr~p~~~~ 274 (276)
T PRK05864 243 EGLGQLFVRLLTANFEEAVAARA--EKRPPVFTD 274 (276)
T ss_pred HHHHHHHHhccChhHHHHHHHHh--ccCCCCCCC
Confidence 865332 3578999999999999 677787644
No 46
>PRK06144 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8.6e-52 Score=397.85 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=216.6
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
.+.+.++. +++|++|+||||+++|+||.+|+++|.++++.++.|+++++|||+|.|+++||+|+|++++.... ..
T Consensus 7 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVltg~g~~~F~aG~Dl~~~~~~~----~~ 81 (262)
T PRK06144 7 TDELLLEV-RGGIARITFNRPAARNAMTWAMYEGLAEICEAIAADPSIRAVVLRGAGDKAFVAGTDIAQFRAFS----TA 81 (262)
T ss_pred CCceEEEe-eCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCceecCcCHHHHhhcc----ch
Confidence 45678886 78999999999999999999999999999999999999999999999867999999999875421 11
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEeccccc-CCCCCChhHHHHHhhCCCc
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG-IGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~-~Gl~P~~g~~~~L~r~~G~ 223 (414)
+....+......++..+.++||||||+|||+|+|||++|+++||||||+++++|++||++ +|++|++|++++|++++|.
T Consensus 82 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~~G~~p~~g~~~~l~~~vG~ 161 (262)
T PRK06144 82 EDAVAYERRIDRVLGALEQLRVPTIAAIAGACVGGGAAIAAACDLRIATPSARFGFPIARTLGNCLSMSNLARLVALLGA 161 (262)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEECCeeeehHHHHHHhCCEEEecCCCEeechhHHhccCCCCccHHHHHHHHhCH
Confidence 111223344456777899999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. +++++++||+.++ |+||+++|||++|+|++++.+.+.+++
T Consensus 162 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------- 202 (262)
T PRK06144 162 A-RVKDMLFTARLLE-AEEALAAGLVNEVVEDAALDARADALA------------------------------------- 202 (262)
T ss_pred H-HHHHHHHcCCCcC-HHHHHHcCCcCeecCHHHHHHHHHHHH-------------------------------------
Confidence 8 9999999999999 999999999999999887765444443
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|+.++... ...+ +.+.+.
T Consensus 203 -----------------------------------~~i~~~~~~a~~~~K~~l~~~~---------~~~l----~~~~~~ 234 (262)
T PRK06144 203 -----------------------------------ELLAAHAPLTLRATKEALRRLR---------REGL----PDGDDL 234 (262)
T ss_pred -----------------------------------HHHHhCCHHHHHHHHHHHHHhh---------hcCH----HHHHHH
Confidence 3599999999999999999765 2333 445566
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+...+.++|++||+++|+ ++++|+|
T Consensus 235 ~~~~~~~~~~~e~~~af~--~kr~p~~ 259 (262)
T PRK06144 235 IRMCYMSEDFREGVEAFL--EKRPPKW 259 (262)
T ss_pred HHHHhcChHHHHHHHHHh--cCCCCCC
Confidence 777889999999999999 6777775
No 47
>PRK06495 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-51 Score=395.65 Aligned_cols=253 Identities=23% Similarity=0.362 Sum_probs=220.1
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.|+.|.++. +++|++||||||+ .|+||.+|+.+|.++++.+++|+++|+|||+|.| ++||+|+|++++.... ..
T Consensus 2 ~~~~i~~~~-~~~v~~itlnrp~-~Nal~~~~~~~l~~al~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~---~~ 75 (257)
T PRK06495 2 MMSQLKLEV-SDHVAVVTLDNPP-VNALSRELRDELIAVFDEISERPDVRVVVLTGAG-KVFCAGADLKGRPDVI---KG 75 (257)
T ss_pred CcceEEEEe-eCCEEEEEECCCc-cccCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCcccCcCHHhHhhcc---CC
Confidence 356688876 7899999999998 5999999999999999999999999999999997 8999999999875421 01
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
......+......++.++.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++ |++++|++++|.
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~---~~~~~l~~~~g~ 152 (257)
T PRK06495 76 PGDLRAHNRRTRECFHAIRECAKPVIAAVNGPALGAGLGLVASCDIIVASENAVFGLPEIDVGLA---GGGKHAMRLFGH 152 (257)
T ss_pred chhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehhHHHHHHhCCEEEecCCCEeeChhhccCcc---ccHHHHHHHhCH
Confidence 11122233444567788999999999999999999999999999999999999999999999996 556789999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++|||+++||++++.+.+.+++
T Consensus 153 ~-~a~~lll~g~~~~-a~eA~~~GLv~~vv~~~~~~~~a~~~a------------------------------------- 193 (257)
T PRK06495 153 S-LTRRMMLTGYRVP-AAELYRRGVIEACLPPEELMPEAMEIA------------------------------------- 193 (257)
T ss_pred H-HHHHHHHcCCeeC-HHHHHHcCCcceecCHHHHHHHHHHHH-------------------------------------
Confidence 8 9999999999999 999999999999999888765444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|++++... ..++.++++.|.+.
T Consensus 194 -----------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~ 229 (257)
T PRK06495 194 -----------------------------------REIASKSPLATRLAKDALNTIE---------NMSLRDGYRYEQDI 229 (257)
T ss_pred -----------------------------------HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHHHHH
Confidence 3599999999999999999876 56899999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+...+.++|++||+++|+ ++++|+|
T Consensus 230 ~~~~~~s~d~~egi~af~--~kr~p~~ 254 (257)
T PRK06495 230 TAKLAKTEDAKEAQRAFL--EKRPPVF 254 (257)
T ss_pred HHHHhcChHHHHHHHHHh--ccCCCCC
Confidence 999999999999999999 6777875
No 48
>PRK07260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-51 Score=395.30 Aligned_cols=250 Identities=25% Similarity=0.344 Sum_probs=220.2
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCC
Q 015014 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (414)
Q Consensus 66 ~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (414)
+++.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++...... ....
T Consensus 2 ~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~~~-~~~~ 78 (255)
T PRK07260 2 EHIIYEV-EDDLATLTLNRPEVSNGFNIPMCQEILEALRLAEEDPSVRFLLINANG-KVFSVGGDLVEMKRAVDE-DDVQ 78 (255)
T ss_pred CceEEEE-ECCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccccCHHHHHhhccc-cchh
Confidence 4577776 789999999999999999999999999999999999999999999997 899999999987642211 1111
Q ss_pred chHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 146 LVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 146 ~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
....+....++++.++.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|..
T Consensus 79 ~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~vg~~- 157 (255)
T PRK07260 79 SLVKIAELVNEISFAIKQLPKPVIMCVDGAVAGAAANMAVAADFCIASTKTKFIQAFVGVGLAPDAGGLFLLTRAIGLN- 157 (255)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCEEEEecCeeehhhHHHHHhCCEEEEeCCCEEechHhhcCCCCCCchhhhhHHhhCHH-
Confidence 1112333445677789999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
++++|++||++++ |+||+++|||++++|++++.+.+.++++
T Consensus 158 ~a~~l~l~g~~~s-a~eA~~~Glv~~vv~~~~l~~~a~~~a~-------------------------------------- 198 (255)
T PRK07260 158 RATHLAMTGEALT-AEKALEYGFVYRVAESEKLEKTCEQLLK-------------------------------------- 198 (255)
T ss_pred HHHHHHHhCCccC-HHHHHHcCCcceecCHhHHHHHHHHHHH--------------------------------------
Confidence 9999999999999 9999999999999998877655444433
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
+|++.||.+++.+|+.++... ..++++.+..|...+.
T Consensus 199 ----------------------------------~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~ 235 (255)
T PRK07260 199 ----------------------------------KLRRGSSNSYAAIKSLVWESF---------FKGWEDYAKLELALQE 235 (255)
T ss_pred ----------------------------------HHHcCCHHHHHHHHHHHHHHh---------hcCHHHHHHHHHHHHH
Confidence 499999999999999999876 5679999999999999
Q ss_pred HhCCCchHHHHHHhhH
Q 015014 386 RSSLRSDFAEGVRAVL 401 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl 401 (414)
..+.++|++|||++|+
T Consensus 236 ~~~~~~~~~e~~~af~ 251 (255)
T PRK07260 236 SLAFKEDFKEGVRAFS 251 (255)
T ss_pred HHhcCHHHHHHHHHHH
Confidence 9999999999999999
No 49
>PRK06688 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-51 Score=396.15 Aligned_cols=254 Identities=25% Similarity=0.363 Sum_probs=225.3
Q ss_pred ccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCC
Q 015014 66 EFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTP 145 (414)
Q Consensus 66 ~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~ 145 (414)
+.+.+++ +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ...
T Consensus 5 ~~i~~~~-~~~v~~i~lnrp~~~Nal~~~~~~~l~~~l~~~~~d~~v~~vVl~g~g-~~F~aG~Dl~~~~~~~----~~~ 78 (259)
T PRK06688 5 TDLLVEL-EDGVLTITINRPDKKNALTAAMYQALADALEAAATDPAVRVVVLTGAG-RAFSAGGDIKDFPKAP----PKP 78 (259)
T ss_pred CceEEEE-ECCEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCccCHHHHhccC----cch
Confidence 3477776 789999999999999999999999999999999999999999999998 8999999999876421 111
Q ss_pred chHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 146 LVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 146 ~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
..+....++++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|..
T Consensus 79 --~~~~~~~~~~~~~l~~~~kp~Iaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~- 155 (259)
T PRK06688 79 --PDELAPVNRFLRAIAALPKPVVAAVNGPAVGVGVSLALACDLVYASESAKFSLPFAKLGLCPDAGGSALLPRLIGRA- 155 (259)
T ss_pred --HHHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEecCchhhcCCCCCcchhhHHHHHhhHH-
Confidence 22444556778889999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
++++|++||+.++ |+||+++||||+++|++++.+.+.+++
T Consensus 156 ~a~~l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a~~~a--------------------------------------- 195 (259)
T PRK06688 156 RAAEMLLLGEPLS-AEEALRIGLVNRVVPAAELDAEADAQA--------------------------------------- 195 (259)
T ss_pred HHHHHHHhCCccC-HHHHHHcCCcceecCHHHHHHHHHHHH---------------------------------------
Confidence 9999999999999 999999999999999877765444333
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
++|++.||.+++.+|+.+++.. ..++++++..|.+.+.
T Consensus 196 ---------------------------------~~i~~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~e~~~~~ 233 (259)
T PRK06688 196 ---------------------------------AKLAAGPASALRYTKRAINAAT---------LTELEEALAREAAGFG 233 (259)
T ss_pred ---------------------------------HHHHhCCHHHHHHHHHHHHhhh---------hCCHHHHHHHHHHHHH
Confidence 3488999999999999999876 5679999999999999
Q ss_pred HhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 386 RSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
..+.++|+++|+++|+ ++++|+|-.
T Consensus 234 ~~~~~~~~~~~~~af~--~~~~p~~~~ 258 (259)
T PRK06688 234 RLLRTPDFREGATAFI--EKRKPDFTG 258 (259)
T ss_pred HHhCCHHHHHHHHHHH--cCCCCCCCC
Confidence 9999999999999999 567787643
No 50
>COG1024 CaiD Enoyl-CoA hydratase/carnithine racemase [Lipid metabolism]
Probab=100.00 E-value=1.5e-51 Score=395.19 Aligned_cols=253 Identities=30% Similarity=0.428 Sum_probs=221.7
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
+..+.++. .++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||||.| ++||+|+||+++.. . . ..
T Consensus 4 ~~~~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvltg~g-~~FsaG~Dl~~~~~-~-~--~~ 77 (257)
T COG1024 4 YETILVER-EDGIAVITLNRPEKLNALNLEMLDELAEALDEAEADPDVRVVVLTGAG-KAFSAGADLKELLS-P-E--DG 77 (257)
T ss_pred CCeeEEEe-eCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCeEEEEEECCC-CceecccCHHHHhc-c-c--ch
Confidence 45577776 566999999999999999999999999999999999999999999998 99999999999875 1 1 11
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
.....++...+.++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|+|++|..
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~eLal~~D~ria~~~a~f~~pe~~iGl~Pg~g~~~~l~r~~G~~ 157 (257)
T COG1024 78 NAAENLMQPGQDLLRALADLPKPVIAAVNGYALGGGLELALACDIRIAAEDAKFGLPEVNLGLLPGDGGTQRLPRLLGRG 157 (257)
T ss_pred hHHHHHHhHHHHHHHHHHhCCCCEEEEEcceEeechhhhhhcCCeEEecCCcEecCcccccccCCCCcHHHHHHHhcCHH
Confidence 11124566667789999999999999999999999999999999999999999999999999999889999999999998
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCC-CCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~-~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
++++|++||+.++ |+||+++|||+++++. +++.+.+.++++
T Consensus 158 -~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~~l~~~a~~~a~------------------------------------ 199 (257)
T COG1024 158 -RAKELLLTGEPIS-AAEALELGLVDEVVPDAEELLERALELAR------------------------------------ 199 (257)
T ss_pred -HHHHHHHcCCcCC-HHHHHHcCCcCeeeCCHHHHHHHHHHHHH------------------------------------
Confidence 9999999999999 9999999999999985 566654444432
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|+. ||.+++.+|+.++... ..++++.+..|...
T Consensus 200 ------------------------------------~~a~-~~~a~~~~k~~~~~~~---------~~~l~~~~~~~~~~ 233 (257)
T COG1024 200 ------------------------------------RLAA-PPLALAATKRLVRAAL---------EADLAEALEAEALA 233 (257)
T ss_pred ------------------------------------HHcc-CHHHHHHHHHHHHHhh---------hccHHHHHHHHHHH
Confidence 3555 9999999999999886 34499999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+...+.++|++||+++|+. |+|.|
T Consensus 234 ~~~~~~~~d~~eg~~a~~~---r~p~~ 257 (257)
T COG1024 234 FARLFSSEDFREGVRAFLE---RKPVF 257 (257)
T ss_pred HHHHhcChhHHHHHHHHHc---cCCCC
Confidence 9888889999999999994 77765
No 51
>PRK07396 dihydroxynaphthoic acid synthetase; Validated
Probab=100.00 E-value=1.7e-51 Score=398.00 Aligned_cols=258 Identities=19% Similarity=0.187 Sum_probs=219.2
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
+++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|.|+++||+|+|++++.... ...
T Consensus 11 ~~~~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vVltg~g~~~F~aG~Dl~~~~~~~--~~~ 87 (273)
T PRK07396 11 EYEDILYKS-ADGIAKITINRPEVRNAFRPKTVKEMIDAFADARDDDNIGVIILTGAGDKAFCSGGDQKVRGYGG--YVD 87 (273)
T ss_pred CCcceEEEe-cCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEeCCCCceEeCcChhhhhccc--ccc
Confidence 356688876 78999999999999999999999999999999999999999999999756999999999864210 000
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
..... .+ ....++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.
T Consensus 88 ~~~~~-~~-~~~~~~~~l~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~~~~~~l~~~vG~ 165 (273)
T PRK07396 88 DDGVP-RL-NVLDLQRLIRTCPKPVIAMVAGYAIGGGHVLHLVCDLTIAADNAIFGQTGPKVGSFDGGYGASYLARIVGQ 165 (273)
T ss_pred hhhhh-hh-HHHHHHHHHHhCCCCEEEEECCEEehHHHHHHHhCCEEEeeCCcEEecccccccccCCchHHHHHHHHhhH
Confidence 11111 11 12346668899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++||||+|||++++.+.+.++++
T Consensus 166 ~-~a~~l~ltg~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~------------------------------------ 207 (273)
T PRK07396 166 K-KAREIWFLCRQYD-AQEALDMGLVNTVVPLADLEKETVRWCR------------------------------------ 207 (273)
T ss_pred H-HHHHHHHhCCCcC-HHHHHHcCCcCeecCHHHHHHHHHHHHH------------------------------------
Confidence 8 9999999999999 9999999999999998877655444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
+|++.||.+++.+|++++... . .++...+.|...
T Consensus 208 ------------------------------------~la~~~~~a~~~~K~~l~~~~---------~-~~~~~~~~e~~~ 241 (273)
T PRK07396 208 ------------------------------------EMLQNSPMALRCLKAALNADC---------D-GQAGLQELAGNA 241 (273)
T ss_pred ------------------------------------HHHhCCHHHHHHHHHHHHhhh---------c-cHHHHHHHHHHH
Confidence 499999999999999999764 2 355556678888
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
+...+.++|++|||.+|+ ++|+|+|-+
T Consensus 242 ~~~~~~~~d~~egi~af~--~kr~p~~~~ 268 (273)
T PRK07396 242 TMLFYMTEEAQEGRNAFN--EKRQPDFSK 268 (273)
T ss_pred HHHHhcChhHHHHHHHHh--CCCCCCCCC
Confidence 888889999999999999 677787643
No 52
>PRK08260 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.6e-51 Score=402.55 Aligned_cols=262 Identities=24% Similarity=0.343 Sum_probs=217.5
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhC--
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD-- 141 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~-- 141 (414)
.++.|.++. +++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.......
T Consensus 2 ~~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~~~~~ 79 (296)
T PRK08260 2 TYETIRYDV-ADGIATITLNRPDKLNAFTVTMARELIEAFDAADADDAVRAVIVTGAG-RAFCAGADLSAGGNTFDLDAP 79 (296)
T ss_pred CcceEEEee-eCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHhcCCCeEEEEEECCC-CCeecCcChHHhhhccccccc
Confidence 356688886 789999999999999999999999999999999999999999999998 8999999999875311000
Q ss_pred ----------CCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCCh
Q 015014 142 ----------RNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV 211 (414)
Q Consensus 142 ----------~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~ 211 (414)
........+......++..|..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAav~G~a~GgG~~LalacD~ria~~~a~f~~pe~~~Gl~p~~ 159 (296)
T PRK08260 80 RTPVEADEEDRADPSDDGVRDGGGRVTLRIFDSLKPVIAAVNGPAVGVGATMTLAMDIRLASTAARFGFVFGRRGIVPEA 159 (296)
T ss_pred ccccccccccccchhHHHHHHHHHHHHHHHHhCCCCEEEEECCeeehHhHHHHHhCCEEEeeCCCEEecchhhcCcCCCc
Confidence 0000111222223456778999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCC
Q 015014 212 GFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 291 (414)
Q Consensus 212 g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (414)
|++++|++++|.. ++++|++||++++ |+||+++|||++|||++++.+.+.+++
T Consensus 160 g~~~~l~r~vG~~-~A~~llltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~a------------------------- 212 (296)
T PRK08260 160 ASSWFLPRLVGLQ-TALEWVYSGRVFD-AQEALDGGLVRSVHPPDELLPAARALA------------------------- 212 (296)
T ss_pred chhhhHHHhhCHH-HHHHHHHcCCccC-HHHHHHCCCceeecCHHHHHHHHHHHH-------------------------
Confidence 9999999999998 9999999999999 999999999999999877765443333
Q ss_pred cchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHhhcCCCCccc
Q 015014 292 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYFSKVASAHGKTDNEL 370 (414)
Q Consensus 292 ~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~-sp~al~~tk~~l~~~~~~~~~~~~~~ 370 (414)
++|+++ ||.+++.+|++++.... ..
T Consensus 213 -----------------------------------------------~~i~~~~~~~a~~~~K~~l~~~~~-------~~ 238 (296)
T PRK08260 213 -----------------------------------------------REIADNTSPVSVALTRQMMWRMAG-------AD 238 (296)
T ss_pred -----------------------------------------------HHHHhcCChHHHHHHHHHHHhccc-------CC
Confidence 348875 99999999999997530 01
Q ss_pred CCHHHHHHHHHHHHHHhCCCchHHHHHHhhHhCCCCCCCCC
Q 015014 371 SKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 371 ~~l~~~l~~e~~~~~~~~~~~D~~eGv~afl~dk~~~P~~~ 411 (414)
..+. ....|...+...+.++|++||+.+|+ ++++|.|-
T Consensus 239 ~~~~-~~~~e~~~~~~~~~~~d~~egi~af~--~kr~p~f~ 276 (296)
T PRK08260 239 HPME-AHRVDSRAIYSRGRSGDGKEGVSSFL--EKRPAVFP 276 (296)
T ss_pred CcHH-HHHHHHHHHHHHccChhHHHHHHHHh--cCCCCCCC
Confidence 2333 34567778888889999999999999 67778763
No 53
>PRK07509 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3.3e-51 Score=393.92 Aligned_cols=255 Identities=22% Similarity=0.291 Sum_probs=218.3
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
++.+.+++ +++|++||||||++.|++|.+|+++|.++++.++.|+++++|||+|.| ++||+|+|++++.... ....
T Consensus 2 ~~~v~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~--~~~~ 77 (262)
T PRK07509 2 MDRVSVTI-EDGIADVRLNRPDKMNALDFAMFEELIATIKRLKKDRGIRAVILSGEG-GAFCAGLDVKSVASSP--GNAV 77 (262)
T ss_pred CceEEEEe-eCCEEEEEecCcccccCCCHHHHHHHHHHHHHHhhCCCCeEEEEECCC-CCcCCCcCHHHHhccc--chhh
Confidence 35677886 799999999999999999999999999999999999999999999997 8999999999875421 0000
Q ss_pred CchHH----HHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhC
Q 015014 145 PLVPK----VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG 220 (414)
Q Consensus 145 ~~~~~----~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~ 220 (414)
..... .......++..+.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~kpvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 157 (262)
T PRK07509 78 KLLFKRLPGNANLAQRVSLGWRRLPVPVIAALEGVCFGGGLQIALGADIRIAAPDTKLSIMEAKWGLVPDMAGTVSLRGL 157 (262)
T ss_pred hhHhhhhHHHHHHHHHHHHHHHhCCCCEEEEECCeeecchHHHHHhCCEEEecCCCEeecchhccCCCCCchHHHHHHHH
Confidence 11110 11122345667889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHH
Q 015014 221 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLP 300 (414)
Q Consensus 221 ~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 300 (414)
+|.. ++++|++||++++ |+||+++||||+++++ +.+.+.
T Consensus 158 ~g~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~--~~~~a~------------------------------------- 196 (262)
T PRK07509 158 VRKD-VARELTYTARVFS-AEEALELGLVTHVSDD--PLAAAL------------------------------------- 196 (262)
T ss_pred hCHH-HHHHHHHcCCCcC-HHHHHHcCChhhhhch--HHHHHH-------------------------------------
Confidence 9998 9999999999999 9999999999999953 333222
Q ss_pred HHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHH
Q 015014 301 QITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE 380 (414)
Q Consensus 301 ~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e 380 (414)
+|+ ++|++.||.+++.+|+.+++.. ..++.+++..|
T Consensus 197 -------------------------------~~a----~~l~~~~~~~~~~~K~~l~~~~---------~~~~~~~~~~e 232 (262)
T PRK07509 197 -------------------------------ALA----REIAQRSPDAIAAAKRLINRSW---------TASVRALLARE 232 (262)
T ss_pred -------------------------------HHH----HHHHhCCHHHHHHHHHHHHHHh---------cCCHHHHHHHH
Confidence 233 3589999999999999999876 56789999999
Q ss_pred HHHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 381 YRVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 381 ~~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+.+...+.++|++||+++|+ ++++|.|
T Consensus 233 ~~~~~~~~~~~d~~e~~~af~--ekr~p~~ 260 (262)
T PRK07509 233 SVEQIRLLLGKNQKIAVKAQM--KKRAPKF 260 (262)
T ss_pred HHHHHHHhcChhHHHHHHHHh--cCCCCCC
Confidence 999999999999999999999 6777875
No 54
>PRK08259 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=4e-51 Score=391.41 Aligned_cols=248 Identities=18% Similarity=0.186 Sum_probs=211.8
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.|.++. +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... . ..
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvltg~g-~~FcaG~Dl~~~~~~~---~-~~- 76 (254)
T PRK08259 4 SVRVER-NGPVTTVILNRPEVRNAVDGPTAAALADAFRAFDADDAASVAVLWGAG-GTFCAGADLKAVGTGR---G-NR- 76 (254)
T ss_pred eEEEEE-ECCEEEEEecCCccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCccCCcChHHHhccc---c-hh-
Confidence 367775 789999999999999999999999999999999999999999999987 8999999999875321 0 00
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
.... ....+...+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~--~~~~~~~~~~~~~kPvIaav~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~iG~~-~ 153 (254)
T PRK08259 77 LHPS--GDGPMGPSRMRLSKPVIAAVSGYAVAGGLELALWCDLRVAEEDAVFGVFCRRWGVPLIDGGTVRLPRLIGHS-R 153 (254)
T ss_pred hhhh--hcchhhhHHhcCCCCEEEEECCEEEhHHHHHHHhCCEEEecCCCEecCcccccCCCCCccHHHHHHHHhCHH-H
Confidence 0000 001112233479999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||+.++ |+||+++||||+|||++++.+.+.+++
T Consensus 154 a~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a---------------------------------------- 192 (254)
T PRK08259 154 AMDLILTGRPVD-ADEALAIGLANRVVPKGQARAAAEELA---------------------------------------- 192 (254)
T ss_pred HHHHHHcCCccC-HHHHHHcCCCCEeeChhHHHHHHHHHH----------------------------------------
Confidence 999999999999 999999999999999988865544443
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
++|++.||.+++.+|+++++.. ..++++.++.|...+..
T Consensus 193 --------------------------------~~la~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~e~~~~~~ 231 (254)
T PRK08259 193 --------------------------------AELAAFPQTCLRADRLSALEQW---------GLPEEAALANEFAHGLA 231 (254)
T ss_pred --------------------------------HHHHhCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHHHHHH
Confidence 3499999999999999999865 56799999999987777
Q ss_pred hCCCchHHHHHHhhHhCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVL 408 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P 408 (414)
.+. +|++|||++|+. |+++|
T Consensus 232 ~~~-~d~~egi~af~~-~~~~~ 251 (254)
T PRK08259 232 VLA-AEALEGAARFAA-GAGRH 251 (254)
T ss_pred HHh-hHHHHHHHHHHh-hhccc
Confidence 666 999999999994 44444
No 55
>PLN02921 naphthoate synthase
Probab=100.00 E-value=1.1e-50 Score=399.85 Aligned_cols=259 Identities=19% Similarity=0.180 Sum_probs=218.3
Q ss_pred CCccEEEEEe-cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 64 AEEFVKGNVH-PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 64 ~~~~v~~~~~-~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
.++.|.++.. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+++||+|+|++++.... ..
T Consensus 63 ~~~~i~~~~~~~~~Va~ItLnrP~~~Nal~~~~~~eL~~al~~~~~d~~vrvVVLtg~G~k~FcaG~Dl~~~~~~~--~~ 140 (327)
T PLN02921 63 EFTDIIYEKAVGEGIAKITINRPERRNAFRPRTVKELQRAFNDARDDSSVGVIILTGKGTKAFCSGGDQAVRGKDG--YV 140 (327)
T ss_pred CCceEEEEEecCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHhhCCCceEEEEecCCCCceecCcChhhhhccc--cc
Confidence 5677888863 58999999999999999999999999999999999999999999999867999999999764310 00
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
.......+ ....++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|
T Consensus 141 ~~~~~~~~--~~~~l~~~l~~~~kPvIAaVnG~a~GGG~~LalacD~riA~~~A~f~~pe~~~Gl~p~~gg~~~L~rliG 218 (327)
T PLN02921 141 GPDDAGRL--NVLDLQIQIRRLPKPVIAMVAGYAVGGGHILHMVCDLTIAADNAVFGQTGPKVGSFDAGYGSSIMARLVG 218 (327)
T ss_pred chhHHHHH--HHHHHHHHHHhCCCCEEEEECCEEecHHHHHHHhCCEEEEeCCCEEeCcccccCCCCCccHHHHHHHHhC
Confidence 01111111 1234667889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||+.++ |+||+++|||++|||++++++.+.++++
T Consensus 219 ~~-~A~ellltG~~~~-A~eA~~~GLV~~vv~~~~l~~~a~~~a~----------------------------------- 261 (327)
T PLN02921 219 QK-KAREMWFLARFYT-ASEALKMGLVNTVVPLDELEGETVKWCR----------------------------------- 261 (327)
T ss_pred HH-HHHHHHHcCCcCC-HHHHHHCCCceEEeCHHHHHHHHHHHHH-----------------------------------
Confidence 98 9999999999999 9999999999999998887665444433
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
+|+++||.+++.+|++++... . ......+.|..
T Consensus 262 -------------------------------------~la~~~p~al~~~K~~l~~~~---------~-~~~~~~~~~~~ 294 (327)
T PLN02921 262 -------------------------------------EILRNSPTAIRVLKSALNAAD---------D-GHAGLQELGGN 294 (327)
T ss_pred -------------------------------------HHHccCHHHHHHHHHHHHHhh---------c-chhHHHHHHHH
Confidence 499999999999999999765 2 23333444457
Q ss_pred HHHHhCCCchHHHHHHhhHhCCCCCCCCCc
Q 015014 383 VALRSSLRSDFAEGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 383 ~~~~~~~~~D~~eGv~afl~dk~~~P~~~~ 412 (414)
.+..++.++|++|||++|+ ++++|+|-+
T Consensus 295 ~~~~~~~s~d~~egi~Af~--ekr~p~f~~ 322 (327)
T PLN02921 295 ATLLFYGSEEGNEGRTAYL--EGRAPDFSK 322 (327)
T ss_pred HHHHHhcCHHHHHHHHHHh--ccCCCCCCC
Confidence 7777889999999999999 778888754
No 56
>PLN03214 probable enoyl-CoA hydratase/isomerase; Provisional
Probab=100.00 E-value=7.8e-51 Score=393.96 Aligned_cols=254 Identities=19% Similarity=0.242 Sum_probs=219.1
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CCccCCCChhhHHHHhhhC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGP-RAFCAGMDIKGVVAEIQKD 141 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~-~~FcaG~Dl~~~~~~~~~~ 141 (414)
.+.+.|.++..+++|++||||||+ .|+||.+|+.+|.++++.+++|+++|+|||||.|+ ++||+|+|++++... .
T Consensus 8 ~~~~~i~~~~~~~~Va~itlnr~~-~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g~~~~FcaG~Dl~~~~~~---~ 83 (278)
T PLN03214 8 GATPGVRVDRRPGGIAVVWLAKEP-VNSMTLAMWRSLDDALTALENDPTVRGVVFASGLRRDVFTAGNDIAELYAP---K 83 (278)
T ss_pred CCCCceEEEEcCCCEEEEEECCCC-CCCCCHHHHHHHHHHHHHHHcCCCceEEEEeCCCCCCcccCccCHHHHhcc---c
Confidence 456678888646899999999986 69999999999999999999999999999999873 699999999987531 1
Q ss_pred CCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCC-CCChhHHHHHhhC
Q 015014 142 RNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGL-FPDVGFSYIAAKG 220 (414)
Q Consensus 142 ~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl-~P~~g~~~~L~r~ 220 (414)
........++.....++..|..+||||||+|||+|+|||++|+++|||||++++++|++||+++|+ +|++|++++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~a~f~~pe~~lGl~~p~~~~~~~l~~~ 163 (278)
T PLN03214 84 TSAARYAEFWLTQTTFLVRLLRSRLATVCAIRGACPAGGCAVSLCCDYRLQTTEGTMGLNEVALGIPVPKFWARLFMGRV 163 (278)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCCCEEEEEcCcccchHHHHHHhCCEEEecCCCEecCcHHHhCCCCCChhHHHHHHHh
Confidence 111111223333345677899999999999999999999999999999999999999999999999 5999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHH
Q 015014 221 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLP 300 (414)
Q Consensus 221 ~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 300 (414)
+|.. ++++|++||+.++ |+||+++||||+|||.+++.+.+.+++
T Consensus 164 ~G~~-~a~~llltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a---------------------------------- 207 (278)
T PLN03214 164 IDRK-VAESLLLRGRLVR-PAEAKQLGLIDEVVPAAALMEAAASAM---------------------------------- 207 (278)
T ss_pred cCHH-HHHHHHHcCCccC-HHHHHHcCCCcEecChHHHHHHHHHHH----------------------------------
Confidence 9998 9999999999999 999999999999999877755443333
Q ss_pred HHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHH
Q 015014 301 QITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYE 380 (414)
Q Consensus 301 ~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e 380 (414)
++|++.||.+++.+|+.+++.. ..+++++++.|
T Consensus 208 --------------------------------------~~l~~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e 240 (278)
T PLN03214 208 --------------------------------------ERALKLPSAARAATKALLREEF---------SAAWEAYYEEE 240 (278)
T ss_pred --------------------------------------HHHHcCCHHHHHHHHHHHHhhH---------HHHHHHHHHHH
Confidence 3599999999999999999876 45789999999
Q ss_pred HHHHHHhCCCchHHHHHHhhHhC
Q 015014 381 YRVALRSSLRSDFAEGVRAVLVD 403 (414)
Q Consensus 381 ~~~~~~~~~~~D~~eGv~afl~d 403 (414)
.+.+...+.++|++||+++|+..
T Consensus 241 ~~~~~~~~~s~d~~egi~aflek 263 (278)
T PLN03214 241 AKGGWKMLSEPSIIKALGGVMER 263 (278)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999999953
No 57
>PRK05870 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=5.2e-51 Score=389.64 Aligned_cols=243 Identities=22% Similarity=0.319 Sum_probs=215.6
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++. +++|++|+||||+++|+||.+|+++|.++++.+++|+++|+|||+|.| ++||+|+|++++.... . ..
T Consensus 4 ~i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~---~--~~ 76 (249)
T PRK05870 4 PVLLDV-DDGVALITVNDPDRRNAVTAEMSAQLRAAVAAAEADPDVHALVVTGAG-KAFCAGADLTALGAAP---G--RP 76 (249)
T ss_pred cEEEEc-cCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCeecCcChHHHhccc---c--cc
Confidence 366775 789999999999999999999999999999999999999999999997 8999999999876421 1 11
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
....+...+.++..+.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.. +
T Consensus 77 ~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~ria~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~ 155 (249)
T PRK05870 77 AEDGLRRIYDGFLAVASCPLPTIAAVNGAAVGAGLNLALAADVRIAGPKALFDARFQKLGLHPGGGATWMLQRAVGPQ-V 155 (249)
T ss_pred hHHHHHHHHHHHHHHHhCCCCEEEEECCEeEchhHHHHHhCCEEEEcCCCEEeCcccccCcCCCCcceeeHHhhhCHH-H
Confidence 122444555677789999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++||||++| +++.+.+.+++
T Consensus 156 a~~l~ltg~~~~-a~eA~~~Glv~~vv--~~l~~~a~~~a---------------------------------------- 192 (249)
T PRK05870 156 ARAALLFGMRFD-AEAAVRHGLALMVA--DDPVAAALELA---------------------------------------- 192 (249)
T ss_pred HHHHHHhCCccC-HHHHHHcCCHHHHH--hhHHHHHHHHH----------------------------------------
Confidence 999999999999 99999999999999 55654443333
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCccc-CCHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL-SKLSGVMKYEYRVAL 385 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~-~~l~~~l~~e~~~~~ 385 (414)
++|++.||.+++.+|+.+++.. . .+++++++.|...+.
T Consensus 193 --------------------------------~~la~~~~~a~~~~K~~~~~~~---------~~~~l~~~~~~e~~~~~ 231 (249)
T PRK05870 193 --------------------------------AGPAAAPRELVLATKASMRATA---------SLAQHAAAVEFELGPQA 231 (249)
T ss_pred --------------------------------HHHHhCCHHHHHHHHHHHHhcc---------ccCCHHHHHHHHHHHHH
Confidence 3599999999999999999865 4 679999999999999
Q ss_pred HhCCCchHHHHHHhhH
Q 015014 386 RSSLRSDFAEGVRAVL 401 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl 401 (414)
..+.++|++||+++|+
T Consensus 232 ~~~~~~d~~eg~~af~ 247 (249)
T PRK05870 232 ASVQSPEFAARLAAAQ 247 (249)
T ss_pred HHhcChhHHHHHHHHh
Confidence 9999999999999998
No 58
>PRK07938 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.2e-50 Score=386.97 Aligned_cols=245 Identities=18% Similarity=0.240 Sum_probs=211.5
Q ss_pred EEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHH
Q 015014 70 GNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPK 149 (414)
Q Consensus 70 ~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 149 (414)
++..+++|++||||||++ |+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++... . .......
T Consensus 5 ~~~~~~~v~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~G-~~F~aG~Dl~~~~~~---~-~~~~~~~ 78 (249)
T PRK07938 5 STTPEPGIAEVTVDYPPV-NALPSAGWFALADAITAAGADPDTRVVVLRAEG-RGFNAGVDIKELQAT---P-GFTALID 78 (249)
T ss_pred ecccCCCEEEEEECCCCc-ccCCHHHHHHHHHHHHHhhcCCCeEEEEEECCC-CceecCcCHHHHhhc---c-chhHHHH
Confidence 344478999999999985 999999999999999999999999999999997 899999999987531 1 1111111
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHH
Q 015014 150 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 229 (414)
Q Consensus 150 ~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~ 229 (414)
.......++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++ |++++|++++|.. ++++
T Consensus 79 ~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~Lal~cD~ria~~~a~f~~pe~~~G~~---g~~~~l~~~vg~~-~a~~ 154 (249)
T PRK07938 79 ANRGCFAAFRAVYECAVPVIAAVHGFCLGGGIGLVGNADVIVASDDATFGLPEVDRGAL---GAATHLQRLVPQH-LMRA 154 (249)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCEEeehHHHHHHhCCEEEEeCCCEeeCccceecCc---hhHHHHHHhcCHH-HHHH
Confidence 22334457778999999999999999999999999999999999999999999999985 5667899999998 9999
Q ss_pred HHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCc
Q 015014 230 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 309 (414)
Q Consensus 230 l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 309 (414)
|++||+.++ |+||+++|||+++||++++++.+.++++
T Consensus 155 l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a~------------------------------------------ 191 (249)
T PRK07938 155 LFFTAATIT-AAELHHFGSVEEVVPRDQLDEAALEVAR------------------------------------------ 191 (249)
T ss_pred HHHhCCcCC-HHHHHHCCCccEEeCHHHHHHHHHHHHH------------------------------------------
Confidence 999999999 9999999999999998887655444433
Q ss_pred ccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCC
Q 015014 310 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 389 (414)
Q Consensus 310 ~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~ 389 (414)
+|++.||.+++.+|+.++... ..++++.++.|.......+.
T Consensus 192 ------------------------------~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~~~ 232 (249)
T PRK07938 192 ------------------------------KIAAKDTRVIRAAKEALNGID---------PQDVERSYRWEQGFTFELNL 232 (249)
T ss_pred ------------------------------HHHhCCHHHHHHHHHHHHhhc---------cCCHHHHHHHHHHHHHHHhc
Confidence 489999999999999999765 56789999999999988999
Q ss_pred CchHHHHHHhhHhCCCCCC
Q 015014 390 RSDFAEGVRAVLVDKDQVL 408 (414)
Q Consensus 390 ~~D~~eGv~afl~dk~~~P 408 (414)
++|++||+++|+ ++|+|
T Consensus 233 ~~d~~eg~~af~--ekr~p 249 (249)
T PRK07938 233 AGVSDEHRDAFV--EKRKA 249 (249)
T ss_pred CccHHHHHHHHH--hcCCC
Confidence 999999999999 55665
No 59
>PRK06023 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.3e-50 Score=387.37 Aligned_cols=243 Identities=20% Similarity=0.259 Sum_probs=213.9
Q ss_pred cEEEEEecC---cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 67 FVKGNVHPN---GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 67 ~v~~~~~~~---~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.|.++. ++ +|++|+||||++.|+||.+|+++|.++++.+++|+++|+|||+|.| ++||+|+|++++.... . .
T Consensus 4 ~i~~~~-~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~g~g-~~FcaG~Dl~~~~~~~--~-~ 78 (251)
T PRK06023 4 HILVER-PGAHPGVQVIRFNRPEKKNAITRAMYATMAKALKAADADDAIRAHVFLGTE-GCFSAGNDMQDFLAAA--M-G 78 (251)
T ss_pred eEEEEe-ecCcCcEEEEEecCcccccCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCeecCcCHHHHhhcc--c-c
Confidence 477776 44 5999999999999999999999999999999999999999999987 8999999999875421 0 1
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
. ..+.....+++..|.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|++++|.
T Consensus 79 ~---~~~~~~~~~~~~~l~~~~kPvIAav~G~a~GgG~~la~acD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~ 155 (251)
T PRK06023 79 G---TSFGSEILDFLIALAEAEKPIVSGVDGLAIGIGTTIHLHCDLTFASPRSLFRTPFVDLALVPEAGSSLLAPRLMGH 155 (251)
T ss_pred c---hhhHHHHHHHHHHHHhCCCCEEEEeCCceecHHHHHHHhCCEEEEeCCCEecCcccccCCCCCchHHHHHHHHHhH
Confidence 1 1123334567778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. +++++++||+.++ |+||+++|||+++||++++.+.+.+++
T Consensus 156 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------- 196 (251)
T PRK06023 156 Q-RAFALLALGEGFS-AEAAQEAGLIWKIVDEEAVEAETLKAA------------------------------------- 196 (251)
T ss_pred H-HHHHHHHhCCCCC-HHHHHHcCCcceeeCHHHHHHHHHHHH-------------------------------------
Confidence 8 9999999999999 999999999999999887765444443
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|++++... ..+.+.++.|.+.
T Consensus 197 -----------------------------------~~l~~~~~~a~~~~K~~l~~~~----------~~l~~~~~~e~~~ 231 (251)
T PRK06023 197 -----------------------------------EELAAKPPQALQIARDLMRGPR----------EDILARIDEEAKH 231 (251)
T ss_pred -----------------------------------HHHHhCCHHHHHHHHHHHHhch----------hhHHHHHHHHHHH
Confidence 3599999999999999998643 3588899999998
Q ss_pred HHHhCCCchHHHHHHhhH
Q 015014 384 ALRSSLRSDFAEGVRAVL 401 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl 401 (414)
+...+.++|++||+++|+
T Consensus 232 ~~~~~~~~~~~e~~~af~ 249 (251)
T PRK06023 232 FAARLKSAEARAAFEAFM 249 (251)
T ss_pred HHHHhCCHHHHHHHHHHh
Confidence 888999999999999998
No 60
>PRK06072 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.8e-50 Score=384.38 Aligned_cols=244 Identities=26% Similarity=0.377 Sum_probs=213.2
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCch
Q 015014 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (414)
Q Consensus 68 v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (414)
|.++. +++|++||||||+++|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.... .
T Consensus 2 i~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~a~~~~~~d~~vr~vVl~g~g-~~F~aG~Dl~~~~~~~--------~ 71 (248)
T PRK06072 2 IKVES-REGYAIVTMSRPDKLNALNLEMRNEFISKLKQINADPKIRVVIVTGEG-RAFCVGADLSEFAPDF--------A 71 (248)
T ss_pred eEEEE-ECCEEEEEECCcccccCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CCcccCcCHHHHhhhh--------H
Confidence 45665 789999999999999999999999999999999999999999999997 8999999999875311 1
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHH
Q 015014 148 PKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 227 (414)
Q Consensus 148 ~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a 227 (414)
..+....+.++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+++++++++| . ++
T Consensus 72 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~~~~~~Gl~p~~g~~~~l~~~~g-~-~a 149 (248)
T PRK06072 72 IDLRETFYPIIREIRFSDKIYISAINGVTAGACIGIALSTDFKFASRDVKFVTAFQRLGLASDTGVAYFLLKLTG-Q-RF 149 (248)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCeeehHHHHHHHhCCEEEEcCCCEEecchhhcCcCCCchHHHHHHHHhh-H-HH
Confidence 123334456777899999999999999999999999999999999999999999999999999999999999999 4 79
Q ss_pred HHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcC
Q 015014 228 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 307 (414)
Q Consensus 228 ~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 307 (414)
+++++||++++ |+||+++|||+.+ +++.+.+.
T Consensus 150 ~~lll~g~~~~-a~eA~~~Glv~~~---~~~~~~a~-------------------------------------------- 181 (248)
T PRK06072 150 YEILVLGGEFT-AEEAERWGLLKIS---EDPLSDAE-------------------------------------------- 181 (248)
T ss_pred HHHHHhCCccC-HHHHHHCCCcccc---chHHHHHH--------------------------------------------
Confidence 99999999999 9999999999953 23433222
Q ss_pred CcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHh
Q 015014 308 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 387 (414)
Q Consensus 308 ~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~ 387 (414)
+.+++|++.||.+++.+|+++++.. ..++++.++.|...+..+
T Consensus 182 ----------------------------~~a~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~~~~~ 224 (248)
T PRK06072 182 ----------------------------EMANRISNGPFQSYIAAKRMINLVL---------YNDLEEFLEYESAIQGYL 224 (248)
T ss_pred ----------------------------HHHHHHHhCCHHHHHHHHHHHHHHh---------hcCHHHHHHHHHHHHHHH
Confidence 2334589999999999999999876 567999999999999999
Q ss_pred CCCchHHHHHHhhHhCCCCCCCC
Q 015014 388 SLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 388 ~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+.++|++||+++|+ ++++|+|
T Consensus 225 ~~~~d~~eg~~af~--~kr~p~~ 245 (248)
T PRK06072 225 GKTEDFKEGISSFK--EKREPKF 245 (248)
T ss_pred hCChhHHHHHHHHh--cCCCCCC
Confidence 99999999999999 6777875
No 61
>TIGR03189 dienoyl_CoA_hyt cyclohexa-1,5-dienecarbonyl-CoA hydratase. This enzyme, cyclohexa-1,5-dienecarbonyl-CoA hydratase, also called dienoyl-CoA hydratase, acts on the product of benzoyl-CoA reductase (EC 1.3.99.15). Benzoyl-CoA is a common intermediate in the degradation of many aromatic compounds, and this enzyme is part of an anaerobic pathway for dearomatization and degradation.
Probab=100.00 E-value=3.7e-50 Score=384.02 Aligned_cols=245 Identities=18% Similarity=0.210 Sum_probs=209.3
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCch
Q 015014 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (414)
Q Consensus 68 v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (414)
|.++. +++|++||||||+ .|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++.. ...
T Consensus 3 v~~~~-~~~v~~itlnrp~-~Nal~~~~~~~l~~~l~~~~~~~~vr~vVl~g~g-~~FcaG~Dl~~~~~--------~~~ 71 (251)
T TIGR03189 3 VWLER-DGKLLRLRLARPK-ANIVDAAMIAALSAALGEHLEDSALRAVLLDAEG-PHFSFGASVAEHMP--------DQC 71 (251)
T ss_pred EEEEe-eCCEEEEEeCCCC-cCCCCHHHHHHHHHHHHHHHcCCCceEEEEECCC-CceecCcChhhhCc--------hhH
Confidence 56665 6889999999998 5999999999999999999999999999999998 89999999997531 011
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHH
Q 015014 148 PKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 227 (414)
Q Consensus 148 ~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a 227 (414)
..++.....++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|+ |++++|++++|.. ++
T Consensus 72 ~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~-~~~~~l~~~vg~~-~a 149 (251)
T TIGR03189 72 AAMLASLHKLVIAMLDSPVPILVAVRGQCLGGGLEVAAAGNLMFAAPDAKLGQPEIVLGVFAP-AASCLLPERMGRV-AA 149 (251)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCeeeeHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCC-chHHHHHHHhCHH-HH
Confidence 223344456778899999999999999999999999999999999999999999999999987 4678999999998 99
Q ss_pred HHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcC
Q 015014 228 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 307 (414)
Q Consensus 228 ~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 307 (414)
++|++||++++ |+||+++|||++++|+.+ +.+.
T Consensus 150 ~~l~ltg~~~~-a~eA~~~Glv~~v~~~~~--~~a~-------------------------------------------- 182 (251)
T TIGR03189 150 EDLLYSGRSID-GAEGARIGLANAVAEDPE--NAAL-------------------------------------------- 182 (251)
T ss_pred HHHHHcCCCCC-HHHHHHCCCcceecCcHH--HHHH--------------------------------------------
Confidence 99999999999 999999999999997532 1111
Q ss_pred CcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHH-HHHHHHHHH
Q 015014 308 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVM-KYEYRVALR 386 (414)
Q Consensus 308 ~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l-~~e~~~~~~ 386 (414)
++ .+++|++.||.+++.+|++++... ..++++.+ ..|......
T Consensus 183 ------------------------~~---~a~~la~~~p~a~~~~K~~l~~~~---------~~~~~~~~~~~e~~~~~~ 226 (251)
T TIGR03189 183 ------------------------AW---FDEHPAKLSASSLRFAVRAARLGM---------NERVKAKIAEVEALYLEE 226 (251)
T ss_pred ------------------------HH---HHHHHHhCCHHHHHHHHHHHHhhh---------cccHHHHHHHHHHHHHHH
Confidence 11 113589999999999999999765 55677776 477788888
Q ss_pred hCCCchHHHHHHhhHhCCCCCCCC
Q 015014 387 SSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
.+.++|++||+++|+ ++++|.|
T Consensus 227 ~~~s~d~~eg~~af~--ekr~p~~ 248 (251)
T TIGR03189 227 LMATHDAVEGLNAFL--EKRPALW 248 (251)
T ss_pred HhCCHhHHHHHHHHH--hcCCCCC
Confidence 999999999999999 6777776
No 62
>PRK12478 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=2.6e-50 Score=393.89 Aligned_cols=260 Identities=18% Similarity=0.155 Sum_probs=213.9
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHH-H---Hh
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVV-A---EI 138 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~-~---~~ 138 (414)
|.++.+.++. +++|++||||||+++|+||.+|+.+|.++++.++.|++||+|||||.| ++||+|+||++.. . ..
T Consensus 2 ~~~~~v~~~~-~~~Va~ItLnrP~~~NAl~~~~~~eL~~al~~~~~d~~vrvvVLtG~G-~~FcaG~Dl~~~~~~~~~~~ 79 (298)
T PRK12478 2 PDFQTLLYTT-AGPVATITLNRPEQLNTIVPPMPDEIEAAIGLAERDQDIKVIVLRGAG-RAFSGGYDFGGGFQHWGEAM 79 (298)
T ss_pred CCceEEEEec-cCCEEEEEecCCcccCCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcccCcCccccccccchhc
Confidence 3456688876 799999999999999999999999999999999999999999999998 8999999998621 1 00
Q ss_pred hhCCCCCchHHH---HHH---HHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccC-CCCCCh
Q 015014 139 QKDRNTPLVPKV---FTA---EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI-GLFPDV 211 (414)
Q Consensus 139 ~~~~~~~~~~~~---~~~---~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~-Gl~P~~ 211 (414)
...........+ ... ....+..+..+||||||+|||+|+|||++|+++||+|||+++++|++||+++ |++|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~A~f~~pe~~l~G~~~-- 157 (298)
T PRK12478 80 MTDGRWDPGKDFAMVTARETGPTQKFMAIWRASKPVIAQVHGWCVGGASDYALCADIVIASDDAVIGTPYSRMWGAYL-- 157 (298)
T ss_pred ccccccCchhhhhhhhhhhcchHHHHHHHHhCCCCEEEEEccEEehhHHHHHHHCCEEEEcCCcEEeccccccccCCc--
Confidence 000000011111 011 1234567889999999999999999999999999999999999999999997 8875
Q ss_pred hHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCC
Q 015014 212 GFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEG 291 (414)
Q Consensus 212 g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (414)
++++ + +.+|.. ++++|++||++|+ |+||+++|||++|||++++++.+.++++
T Consensus 158 ~~~~-~-~~vG~~-~A~~llltg~~i~-A~eA~~~GLV~~vv~~~~l~~~a~~~a~------------------------ 209 (298)
T PRK12478 158 TGMW-L-YRLSLA-KVKWHSLTGRPLT-GVQAAEAELINEAVPFERLEARVAEVAT------------------------ 209 (298)
T ss_pred hhHH-H-HHhhHH-HHHHHHHcCCccC-HHHHHHcCCcceecCHHHHHHHHHHHHH------------------------
Confidence 3333 2 458998 9999999999999 9999999999999999888765544443
Q ss_pred cchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccC
Q 015014 292 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELS 371 (414)
Q Consensus 292 ~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~ 371 (414)
+|+.+||.+++.+|++++... ...
T Consensus 210 ------------------------------------------------~la~~~p~a~~~~K~~l~~~~--------~~~ 233 (298)
T PRK12478 210 ------------------------------------------------ELARIPLSQLQAQKLIVNQAY--------ENM 233 (298)
T ss_pred ------------------------------------------------HHHhCCHHHHHHHHHHHHHHH--------Hhc
Confidence 489999999999999999876 124
Q ss_pred CHHHHHHHHHHHHHHhCCCchHH--------HHHHhhHhCCCCCCCCCc
Q 015014 372 KLSGVMKYEYRVALRSSLRSDFA--------EGVRAVLVDKDQVLSQLK 412 (414)
Q Consensus 372 ~l~~~l~~e~~~~~~~~~~~D~~--------eGv~afl~dk~~~P~~~~ 412 (414)
++++.++.|...+..++.++|++ |||+||+ ++|+|+|-+
T Consensus 234 ~l~~~~~~e~~~~~~~~~s~d~~e~~~~~~~egv~Af~--ekR~p~f~~ 280 (298)
T PRK12478 234 GLASTQTLGGILDGLMRNTPDALEFIRTAETQGVRAAV--ERRDGPFGD 280 (298)
T ss_pred chhHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHH--HhcCCcccc
Confidence 69999999999999999999997 5999999 777888754
No 63
>PRK07827 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=6e-50 Score=384.71 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=218.2
Q ss_pred CccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCC
Q 015014 65 EEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNT 144 (414)
Q Consensus 65 ~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~ 144 (414)
+..+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++.... ....
T Consensus 5 ~~~i~~~~-~~~v~~i~lnrp~~~Nal~~~~~~el~~~l~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~--~~~~ 80 (260)
T PRK07827 5 DTLVRYAV-DGGVATLTLDSPHNRNALSARLVAQLHDGLRAAAADPAVRAVVLTHTG-GTFCAGADLSEAGGGG--GDPY 80 (260)
T ss_pred CcceEEEe-eCCEEEEEEcCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEEcCC-CCccCCcChHHHhhcc--cCch
Confidence 34577776 789999999999999999999999999999999999999999999997 8999999999875420 0111
Q ss_pred CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 145 PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 145 ~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
.....++.....++..+..+||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|+++++++++| .
T Consensus 81 ~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~l~~-~ 159 (260)
T PRK07827 81 DAAVARAREMTALLRAIVELPKPVIAAIDGHVRAGGFGLVGACDIVVAGPESTFALTEARIGVAPAIISLTLLPRLSP-R 159 (260)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEEcCeeecchhhHHHhCCEEEEcCCCEEeCcccccCCCCCcccchhHHhhhH-H
Confidence 111224445567788999999999999999999999999999999999999999999999999999999999999864 5
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||+.++ |+||+++|||+++++ ++++.+..+
T Consensus 160 -~a~~l~l~g~~~~-a~eA~~~Glv~~v~~--~l~~~a~~~--------------------------------------- 196 (260)
T PRK07827 160 -AAARYYLTGEKFG-AAEAARIGLVTAAAD--DVDAAVAAL--------------------------------------- 196 (260)
T ss_pred -HHHHHHHhCCccC-HHHHHHcCCcccchH--HHHHHHHHH---------------------------------------
Confidence 8999999999999 999999999999974 354433333
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
+++|++.||.+++.+|+++++.. ...+++.++.|...+
T Consensus 197 ---------------------------------a~~la~~~~~a~~~~K~~l~~~~---------~~~~~~~~~~~~~~~ 234 (260)
T PRK07827 197 ---------------------------------LADLRRGSPQGLAESKALTTAAV---------LAGFDRDAEELTEES 234 (260)
T ss_pred ---------------------------------HHHHHhCCHHHHHHHHHHHHhhh---------cCCHHHHHHHHHHHH
Confidence 33589999999999999999876 567999999999999
Q ss_pred HHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 385 LRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
...+.++|++||+++|+ ++++|+|
T Consensus 235 ~~~~~~~~~~~~~~af~--~kr~p~~ 258 (260)
T PRK07827 235 ARLFVSDEAREGMTAFL--QKRPPRW 258 (260)
T ss_pred HHHhcChhHHHHHHHHh--cCCCCCC
Confidence 99999999999999999 5666764
No 64
>PRK07854 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.7e-49 Score=377.79 Aligned_cols=239 Identities=18% Similarity=0.277 Sum_probs=209.4
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCch
Q 015014 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (414)
Q Consensus 68 v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (414)
|.++. +++|++||||||+++|+||.+|+.+|.++++.++++ ++|+|||+|.| ++||+|+|+++... .
T Consensus 2 ~~~~~-~~~v~~itlnrp~~~Nal~~~~~~~l~~al~~~~~~-~vr~vvl~g~g-~~F~aG~Dl~~~~~----------~ 68 (243)
T PRK07854 2 IGVTR-DGQVLTIELQRPERRNALNAELCEELREAVRKAVDE-SARAIVLTGQG-TVFCAGADLSGDVY----------A 68 (243)
T ss_pred ceEEE-eCCEEEEEeCCCccccCCCHHHHHHHHHHHHHHhcC-CceEEEEECCC-CceecccCCccchh----------H
Confidence 45665 789999999999999999999999999999999865 89999999997 89999999985211 1
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHH
Q 015014 148 PKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVG 227 (414)
Q Consensus 148 ~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a 227 (414)
..+......++..+.++||||||+|||+|+|||++|+++||+|||+++++|++||+++|++|++|++++|++++|.+ ++
T Consensus 69 ~~~~~~~~~~~~~l~~~~kP~Iaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~~~~G~~-~a 147 (243)
T PRK07854 69 DDFPDALIEMLHAIDAAPVPVIAAINGPAIGAGLQLAMACDLRVVAPEAYFQFPVAKYGIALDNWTIRRLSSLVGGG-RA 147 (243)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEecCcccccHHHHHHhCCEEEEcCCCEEeccccccccCCCccHHHHHHHHhCHH-HH
Confidence 12334445677789999999999999999999999999999999999999999999999999999999999999998 99
Q ss_pred HHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcC
Q 015014 228 AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFS 307 (414)
Q Consensus 228 ~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~ 307 (414)
++|++||++++ |+||+++|||++|++ ++ .+.
T Consensus 148 ~~l~ltg~~~~-a~eA~~~Glv~~v~~---~~-~a~-------------------------------------------- 178 (243)
T PRK07854 148 RAMLLGAEKLT-AEQALATGMANRIGT---LA-DAQ-------------------------------------------- 178 (243)
T ss_pred HHHHHcCCCcC-HHHHHHCCCcccccC---HH-HHH--------------------------------------------
Confidence 99999999999 999999999999964 22 222
Q ss_pred CcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHh
Q 015014 308 SEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRS 387 (414)
Q Consensus 308 ~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~ 387 (414)
+|++ +|++.||.+++.+|+.++.. .++++.++.|...+..+
T Consensus 179 ------------------------~~a~----~l~~~~~~a~~~~K~~l~~~-----------~~~~~~~~~e~~~~~~~ 219 (243)
T PRK07854 179 ------------------------AWAA----EIAGLAPLALQHAKRVLNDD-----------GAIEEAWPAHKELFDKA 219 (243)
T ss_pred ------------------------HHHH----HHHhCCHHHHHHHHHHHHcc-----------CCHHHHHHHHHHHHHHH
Confidence 3333 58999999999999999863 35899999999999999
Q ss_pred CCCchHHHHHHhhHhCCCCCCCC
Q 015014 388 SLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 388 ~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+.++|++||+++|+ ++++|.|
T Consensus 220 ~~~~d~~eg~~af~--~kr~p~~ 240 (243)
T PRK07854 220 WASQDAIEAQVARI--EKRPPKF 240 (243)
T ss_pred hcCchHHHHHHHHh--CCCCCCC
Confidence 99999999999999 6677775
No 65
>PRK08321 naphthoate synthase; Validated
Probab=100.00 E-value=1.2e-49 Score=390.13 Aligned_cols=261 Identities=19% Similarity=0.176 Sum_probs=215.5
Q ss_pred CccEEEEEe-cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC------CCccCCCChhhHHHH
Q 015014 65 EEFVKGNVH-PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGP------RAFCAGMDIKGVVAE 137 (414)
Q Consensus 65 ~~~v~~~~~-~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~------~~FcaG~Dl~~~~~~ 137 (414)
+++|.++.. +++|++||||||+++|+||.+|+.+|.++++.++.|+++++|||+|.|+ ++||+|+|++++...
T Consensus 22 ~~~i~~~~~~~~~va~itlnrP~~~Nal~~~~~~~l~~al~~~~~d~~vrvvVltg~g~~~~~~~~~FcaG~Dl~~~~~~ 101 (302)
T PRK08321 22 FTDITYHRAVDQGTVRIAFDRPEVRNAFRPHTVDELYRALDHARMSPDVGCVLLTGNGPSPKDGGWAFCSGGDQRIRGRD 101 (302)
T ss_pred ceeEEEEEecCCCEEEEEeCCcccccCCCHHHHHHHHHHHHHHhhCCCcEEEEEeCCCCCCCCCCCeeecCcChhhhccc
Confidence 445777752 5789999999999999999999999999999999999999999999873 699999999976321
Q ss_pred h---hhCCCCC--chHHH-HHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEc-CCeeEecccccCCCCCC
Q 015014 138 I---QKDRNTP--LVPKV-FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLLAMPENGIGLFPD 210 (414)
Q Consensus 138 ~---~~~~~~~--~~~~~-~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~Gl~P~ 210 (414)
. ....... ..... ......+...+..+||||||+|||+|+|||++|+++||||||+ ++++|++||+++|++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkP~IAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~p~ 181 (302)
T PRK08321 102 GYQYAEGDEADTVDPARAGRLHILEVQRLIRFMPKVVIAVVPGWAAGGGHSLHVVCDLTLASREHARFKQTDADVGSFDG 181 (302)
T ss_pred cccccccccccchhhhHHHHHHHHHHHHHHHcCCCCEEEEEcCeeehHHHHHHHhCCEEEEecCCCEEECCccccccCCC
Confidence 0 0000000 00001 1112245567889999999999999999999999999999999 69999999999999999
Q ss_pred hhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCC
Q 015014 211 VGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPE 290 (414)
Q Consensus 211 ~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 290 (414)
+|++++|+|++|.+ ++++|++||+.++ |+||+++|||+++||++++.+.+.++++
T Consensus 182 ~~~~~~L~r~vG~~-~A~~l~ltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~----------------------- 236 (302)
T PRK08321 182 GYGSAYLARQVGQK-FAREIFFLGRTYS-AEEAHDMGAVNAVVPHAELETEALEWAR----------------------- 236 (302)
T ss_pred chHHHHHHHHhCHH-HHHHHHHcCCccC-HHHHHHCCCceEeeCHHHHHHHHHHHHH-----------------------
Confidence 99999999999998 9999999999999 9999999999999998887665544433
Q ss_pred CcchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCccc
Q 015014 291 GEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNEL 370 (414)
Q Consensus 291 ~~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~ 370 (414)
+|++.||.+++.+|++++... .
T Consensus 237 -------------------------------------------------~la~~~~~a~~~~K~~l~~~~---------~ 258 (302)
T PRK08321 237 -------------------------------------------------EINGKSPTAMRMLKYAFNLTD---------D 258 (302)
T ss_pred -------------------------------------------------HHHhCCHHHHHHHHHHHHhhh---------c
Confidence 499999999999999998754 2
Q ss_pred CCHHHHHHHHHHHHHHhCCCchHHHHHHhhHhCCCCCCCCC
Q 015014 371 SKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 371 ~~l~~~l~~e~~~~~~~~~~~D~~eGv~afl~dk~~~P~~~ 411 (414)
.+.+....|.+.+..++.++|++|||.+|+ ++++|.|-
T Consensus 259 -~~~~~~~~e~~~~~~~~~~~d~~egi~af~--ekr~p~~~ 296 (302)
T PRK08321 259 -GLVGQQLFAGEATRLAYMTDEAQEGRDAFL--EKRDPDWS 296 (302)
T ss_pred -ccHHHHHHHHHHHHHHhcCHHHHHHHHHHh--ccCCCCCC
Confidence 234445568888888899999999999999 67778763
No 66
>PRK07110 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.1e-49 Score=378.49 Aligned_cols=245 Identities=17% Similarity=0.221 Sum_probs=217.6
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
-+..+.++. +++|++|+||||++.|++|.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++..... .
T Consensus 3 ~~~~~~~~~-~~~v~~i~ln~p~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vvl~g~g-~~F~aG~Dl~~~~~~~~---~ 77 (249)
T PRK07110 3 MKVVELREV-EEGIAQVTMQDRVNKNAFSDELCDQLHEAFDTIAQDPRYKVVILTGYP-NYFATGGTQEGLLSLQT---G 77 (249)
T ss_pred CCceEEEEe-eCCEEEEEecCCCccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CCeeCCcChHHHhhccc---h
Confidence 355677776 789999999999999999999999999999999999999999999997 89999999998754211 1
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
.. .+.. ..++..+.++||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.
T Consensus 78 ---~~-~~~~-~~~~~~l~~~~kPvIaav~G~a~GgG~~lal~cD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~~~~g~ 152 (249)
T PRK07110 78 ---KG-TFTE-ANLYSLALNCPIPVIAAMQGHAIGGGLVLGLYADIVVLSRESVYTANFMKYGFTPGMGATAILPEKLGL 152 (249)
T ss_pred ---hh-hHhh-HHHHHHHHcCCCCEEEEecCceechHHHHHHhCCEEEEeCCCEecCchhccCCCCCchHHHHHHHHhCH
Confidence 01 1222 467788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||++++ |+||+++|||++|+|++++.+.+.+++
T Consensus 153 ~-~a~~llltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a------------------------------------- 193 (249)
T PRK07110 153 A-LGQEMLLTARYYR-GAELKKRGVPFPVLPRAEVLEKALELA------------------------------------- 193 (249)
T ss_pred H-HHHHHHHcCCccC-HHHHHHcCCCeEEeChHHHHHHHHHHH-------------------------------------
Confidence 8 9999999999999 999999999999999887765444433
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|+.+++.. ...+.+.++.|...
T Consensus 194 -----------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~~ 229 (249)
T PRK07110 194 -----------------------------------RSLAEKPRHSLVLLKDHLVADR---------RRRLPEVIEQEVAM 229 (249)
T ss_pred -----------------------------------HHHHhCCHHHHHHHHHHHHHhh---------hccHHHHHHHHHHH
Confidence 3599999999999999999876 56899999999999
Q ss_pred HHHhCCCchHHHHHHhhH
Q 015014 384 ALRSSLRSDFAEGVRAVL 401 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl 401 (414)
+...+.++|++|||+++-
T Consensus 230 ~~~~~~~~~~~egi~~~~ 247 (249)
T PRK07110 230 HEKTFHQPEVKRRIESLY 247 (249)
T ss_pred HHHHhCCHhHHHHHHHhc
Confidence 999999999999999863
No 67
>PRK07112 polyketide biosynthesis enoyl-CoA hydratase; Validated
Probab=100.00 E-value=2.2e-49 Score=379.63 Aligned_cols=252 Identities=16% Similarity=0.181 Sum_probs=213.2
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRN 143 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~ 143 (414)
.|+.+.++. +++|++|+||||++.|++|.+|+.+|.++++.++ +++++|||+|.| ++||+|+|++++..... .
T Consensus 2 ~~~~i~~~~-~~~i~~itlnrp~~~Nal~~~~~~~L~~~l~~~~--~~vr~vVl~g~g-~~FsaG~Dl~~~~~~~~---~ 74 (255)
T PRK07112 2 DYQTIRVRQ-QGDVCFLQLHRPEAQNTINDRLIAECMDVLDRCE--HAATIVVLEGLP-EVFCFGADFSAIAEKPD---A 74 (255)
T ss_pred CCceEEEEe-eCCEEEEEEcCCCccCCCCHHHHHHHHHHHHHhh--cCceEEEEEcCC-CCcccCcCHHHHhhccc---c
Confidence 456788886 7899999999999999999999999999999998 369999999987 89999999998754211 0
Q ss_pred CCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc
Q 015014 144 TPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG 223 (414)
Q Consensus 144 ~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~ 223 (414)
...........+.++.++.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++| +.+|++++|.
T Consensus 75 ~~~~~~~~~~~~~~~~~l~~~~kPvIaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~Gl~p~~~-~~~l~~~vg~ 153 (255)
T PRK07112 75 GRADLIDAEPLYDLWHRLATGPYVTIAHVRGKVNAGGIGFVAASDIVIADETAPFSLSELLFGLIPACV-LPFLIRRIGT 153 (255)
T ss_pred chhhhhhHHHHHHHHHHHHcCCCCEEEEEecEEEcchhHHHHcCCEEEEcCCCEEeCchhhhccCcchh-hHHHHHHhCH
Confidence 111111123335677789999999999999999999999999999999999999999999999999865 5679999999
Q ss_pred HHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHH
Q 015014 224 GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQIT 303 (414)
Q Consensus 224 ~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~ 303 (414)
. ++++|++||+.++ |+||+++||||++||+++. .+.
T Consensus 154 ~-~a~~l~l~g~~~~-a~eA~~~Glv~~vv~~~~~--~~~---------------------------------------- 189 (255)
T PRK07112 154 Q-KAHYMTLMTQPVT-AQQAFSWGLVDAYGANSDT--LLR---------------------------------------- 189 (255)
T ss_pred H-HHHHHHHhCCccc-HHHHHHcCCCceecCcHHH--HHH----------------------------------------
Confidence 8 9999999999999 9999999999999986542 111
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++ +++|++.||.+++.+|+.++... ..+.+.++.|.+.
T Consensus 190 ----------------------------~~----a~~l~~~~p~a~~~~K~~~~~~~----------~~~~~~~~~e~~~ 227 (255)
T PRK07112 190 ----------------------------KH----LLRLRCLNKAAVARYKSYASTLD----------DTVAAARPAALAA 227 (255)
T ss_pred ----------------------------HH----HHHHHhCCHHHHHHHHHHHHHhh----------hhHHHHHHHHHHH
Confidence 22 23699999999999999998643 3588999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCCCCCCCCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDKDQVLSQL 411 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk~~~P~~~ 411 (414)
...++.++|++||+.+|+ ++++|.|-
T Consensus 228 ~~~~~~~~~~~eg~~af~--~kr~p~~~ 253 (255)
T PRK07112 228 NIEMFADPENLRKIARYV--ETGKFPWE 253 (255)
T ss_pred HHHHHcChHHHHHHHHHH--cCCCCCCC
Confidence 999999999999999999 66777663
No 68
>PF00378 ECH: Enoyl-CoA hydratase/isomerase family; InterPro: IPR001753 The crotonase superfamily is comprised of mechanistically diverse proteins that share a conserved trimeric quaternary structure (sometimes a hexamer consisting of a dimer of trimers), the core of which consists of 4 turns of a (beta/beta/alpha)n superhelix. Some enzymes in the superfamily have been shown to display dehalogenase, hydratase, and isomerase activities, while others have been implicated in carbon-carbon bond formation and cleavage as well as the hydrolysis of thioesters []. However, these different enzymes share the need to stabilise an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two structurally conserved peptidic NH groups that provide hydrogen bonds to the carbonyl moieties of the acyl-CoA substrates and form an "oxyanion hole". The CoA thioester derivatives bind in a characteristic hooked shape and a conserved tunnel binds the pantetheine group of CoA, which links the 3'-phosphate ADP binding site to the site of reaction []. Enzymes in the crotonase superfamily include: Enoyl-CoA hydratase (crotonase; 4.2.1.17 from EC), which catalyses the hydratation of 2-trans-enoyl-CoA into 3-hydroxyacyl-CoA []. 3-2trans-enoyl-CoA isomerase (or dodecenoyl-CoA isomerise; 5.3.3.8 from EC), which shifts the 3-double bond of the intermediates of unsaturated fatty acid oxidation to the 2-trans position []. 3-hydroxbutyryl-CoA dehydratase (crotonase; 4.2.1.55 from EC), a bacterial enzyme involved in the butyrate/butanol-producing pathway. 4-Chlorobenzoyl-CoA dehalogenase (3.8.1.6 from EC), a Pseudomonas enzyme which catalyses the conversion of 4-chlorobenzoate-CoA to 4-hydroxybenzoate-CoA []. Dienoyl-CoA isomerise, which catalyses the isomerisation of 3-trans,5-cis-dienoyl-CoA to 2-trans,4-trans-dienoyl-CoA []. Naphthoate synthase (MenB, or DHNA synthetase; 4.1.3.36 from EC), a bacterial enzyme involved in the biosynthesis of menaquinone (vitamin K2) []. Carnitine racemase (gene caiD), which catalyses the reversible conversion of crotonobetaine to L-carnitine in Escherichia coli []. Methylmalonyl CoA decarboxylase (MMCD; 4.1.1.41 from EC), which has a hexameric structure (dimer of trimers) []. Carboxymethylproline synthase (CarB), which is involved in carbapenem biosynthesis []. 6-oxo camphor hydrolase, which catalyses the desymmetrisation of bicyclic beta-diketones to optically active keto acids []. The alpha subunit of fatty oxidation complex, a multi-enzyme complex that catalyses the last three reactions in the fatty acid beta-oxidation cycle []. AUH protein, a bifunctional RNA-binding homologue of enoyl-CoA hydratase []. This entry represents the core domain found in crotonase superfamily members.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2VRE_B 3RSI_A 1HZD_F 2ZQR_E 2ZQQ_D 3R9S_C 1O8U_E 1SZO_C 3MOY_A 2UZF_A ....
Probab=100.00 E-value=3e-50 Score=383.53 Aligned_cols=242 Identities=31% Similarity=0.474 Sum_probs=221.2
Q ss_pred EEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHH
Q 015014 70 GNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPK 149 (414)
Q Consensus 70 ~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 149 (414)
|+. +|+|++|+||||++.|++|.+|+.+|.++++.++.|+++++||++|.| ++||+|+|++++.... ......
T Consensus 2 ~~~-~~~v~~i~ln~p~~~N~l~~~~~~~l~~~l~~~~~d~~v~vvv~~~~~-~~F~~G~Dl~~~~~~~-----~~~~~~ 74 (245)
T PF00378_consen 2 YEI-EDGVATITLNRPEKRNALNPEMLDELEEALDEAEADPDVKVVVISGGG-KAFCAGADLKEFLNSD-----EEEARE 74 (245)
T ss_dssp EEE-ETTEEEEEEECGGGTTEBSHHHHHHHHHHHHHHHHSTTESEEEEEEST-SESBESB-HHHHHHHH-----HHHHHH
T ss_pred EEE-ECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhcCCccEEEEeecc-cccccccchhhhhccc-----cccccc
Confidence 565 799999999999889999999999999999999999999999999876 8999999999988751 223345
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHH
Q 015014 150 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAY 229 (414)
Q Consensus 150 ~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~ 229 (414)
+....+.++..+..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. ++++
T Consensus 75 ~~~~~~~l~~~l~~~~kp~Iaav~G~a~GgG~~lala~D~~ia~~~a~f~~pe~~~G~~p~~g~~~~l~r~~g~~-~a~~ 153 (245)
T PF00378_consen 75 FFRRFQELLSRLANFPKPTIAAVNGHAVGGGFELALACDFRIAAEDAKFGFPEVRLGIFPGAGGTFRLPRLIGPS-RARE 153 (245)
T ss_dssp HHHHHHHHHHHHHHSSSEEEEEESSEEETHHHHHHHHSSEEEEETTTEEETGGGGGTSSSTSTHHHHHHHHHHHH-HHHH
T ss_pred cchhhccccccchhhhhheeecccccccccccccccccceEEeecccceeeeecccCcccccccccccceeeecc-cccc
Confidence 777778899999999999999999999999999999999999999999999999999999999999999999997 9999
Q ss_pred HHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCc
Q 015014 230 LGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSE 309 (414)
Q Consensus 230 l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~ 309 (414)
+++||++++ |+||+++||||+++|++++.+.+..++
T Consensus 154 l~l~g~~~~-a~eA~~~Glv~~v~~~~~l~~~a~~~a------------------------------------------- 189 (245)
T PF00378_consen 154 LLLTGEPIS-AEEALELGLVDEVVPDEELDEEALELA------------------------------------------- 189 (245)
T ss_dssp HHHHTCEEE-HHHHHHTTSSSEEESGGGHHHHHHHHH-------------------------------------------
T ss_pred cccccccch-hHHHHhhcceeEEcCchhhhHHHHHHH-------------------------------------------
Confidence 999999999 999999999999999988765554443
Q ss_pred ccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCC
Q 015014 310 KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSL 389 (414)
Q Consensus 310 ~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~ 389 (414)
++|++.||.+++.+|+.+++.. ...+.+.++.|.+.+..++.
T Consensus 190 -----------------------------~~l~~~~~~a~~~~K~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 231 (245)
T PF00378_consen 190 -----------------------------KRLAAKPPSALRATKKALNRAL---------EQSLEEALEFEQDLFAECFK 231 (245)
T ss_dssp -----------------------------HHHHTSCHHHHHHHHHHHHHHH---------HSHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------HHHhcCCHHHHHHHHHHHHHHH---------HhhHHHHHHHHHHHHHHHcC
Confidence 3599999999999999999976 56799999999999999999
Q ss_pred CchHHHHHHhhH
Q 015014 390 RSDFAEGVRAVL 401 (414)
Q Consensus 390 ~~D~~eGv~afl 401 (414)
++|++|||++|+
T Consensus 232 ~~~~~e~~~~f~ 243 (245)
T PF00378_consen 232 SEDFQEGIAAFL 243 (245)
T ss_dssp SHHHHHHHHHHH
T ss_pred CHHHHHHHHHHh
Confidence 999999999999
No 69
>PRK06190 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=7.3e-49 Score=376.30 Aligned_cols=236 Identities=23% Similarity=0.305 Sum_probs=208.7
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
|+++++.++. +++|++|+||||++.|+||.+|+.+|.++++.++.|+++|+|||+|.| ++||+|+|++++....
T Consensus 1 ~~~~~v~~~~-~~~va~Itlnrp~~~Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~---- 74 (258)
T PRK06190 1 MTEPILLVET-HDRVRTLTLNRPEARNALSAALRRALFAALAEADADDDVDVVVLTGAD-PAFCAGLDLKELGGDG---- 74 (258)
T ss_pred CCCceEEEEe-eCCEEEEEEcCCcccCCCCHHHHHHHHHHHHHHhhCCCceEEEEECCC-CCccCCcCHHHHhccc----
Confidence 4567888886 799999999999999999999999999999999999999999999997 8999999999875411
Q ss_pred CCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCC
Q 015014 143 NTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPG 222 (414)
Q Consensus 143 ~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G 222 (414)
... . .......++..+.++|||+||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|++++|
T Consensus 75 -~~~-~-~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~lalacD~~ia~~~a~f~~pe~~~Gl~p~~g~~~~l~r~vG 151 (258)
T PRK06190 75 -SAY-G-AQDALPNPSPAWPAMRKPVIGAINGAAVTGGLELALACDILIASERARFADTHARVGILPGWGLSVRLPQKVG 151 (258)
T ss_pred -chh-h-HHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEeCCCEEECcccccCcCCCccHHHHHHHHhC
Confidence 111 1 1123346777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHH
Q 015014 223 GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQI 302 (414)
Q Consensus 223 ~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i 302 (414)
.. ++++|++||++++ |+||+++||||+++|++++.+.+.+++
T Consensus 152 ~~-~a~~l~ltg~~~~-a~eA~~~GLv~~vv~~~~l~~~a~~~a------------------------------------ 193 (258)
T PRK06190 152 IG-RARRMSLTGDFLD-AADALRAGLVTEVVPHDELLPRARRLA------------------------------------ 193 (258)
T ss_pred HH-HHHHHHHhCCccC-HHHHHHcCCCeEecCHhHHHHHHHHHH------------------------------------
Confidence 98 9999999999999 999999999999999888765444433
Q ss_pred HhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHH
Q 015014 303 TSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYR 382 (414)
Q Consensus 303 ~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~ 382 (414)
++|+++||.+++.+|++++... ..++++.++.|..
T Consensus 194 ------------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~e~~ 228 (258)
T PRK06190 194 ------------------------------------ASIAGNNPAAVRALKASYDDGA---------AAQTGDALALEAE 228 (258)
T ss_pred ------------------------------------HHHHcCCHHHHHHHHHHHHHhh---------cCCHHHHHHHHHH
Confidence 3489999999999999999876 5689999999999
Q ss_pred HHHHhCCC
Q 015014 383 VALRSSLR 390 (414)
Q Consensus 383 ~~~~~~~~ 390 (414)
.+...+.+
T Consensus 229 ~~~~~~~s 236 (258)
T PRK06190 229 AARAHNRS 236 (258)
T ss_pred HHHHHHcC
Confidence 99888776
No 70
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=6.7e-47 Score=393.02 Aligned_cols=255 Identities=13% Similarity=0.039 Sum_probs=218.6
Q ss_pred CccEEEEE-ecCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCC-ccCC
Q 015014 65 EEFVKGNV-HPNGVAVITLDRPKAL-------------NAMNLDMDIKYKSFLDEWE-SDPRVKCVLIEGSGPRA-FCAG 128 (414)
Q Consensus 65 ~~~v~~~~-~~~~V~~Itlnrp~~~-------------Nal~~~m~~eL~~~l~~~~-~d~~v~~vVl~g~g~~~-FcaG 128 (414)
|.+|.+.. ++++|++||||||+++ |+|+.+|+.+|.+++..++ +|+++|+|||||.| +. ||+|
T Consensus 255 ~~~~~v~~~~~~~va~itlnrP~~~~~~~~~~~~~~~~Nal~~~~~~~L~~a~~~~~~~d~~vr~vVl~g~G-~~~F~aG 333 (546)
T TIGR03222 255 YPTVDVAIDRAARTATITLKGPKAAQPADIAAIVAQGANWWPLKLARELDDAILHLRTNELDIGLWVFRTQG-DAELVLA 333 (546)
T ss_pred eeeEEEEEeccCCEEEEEecChhhcCccccccccccccCcCCHHHHHHHHHHHHHHhhCCCCeEEEEEEcCC-CCceecC
Confidence 45555543 3688999999999999 9999999999999999998 46999999999987 66 9999
Q ss_pred CChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEE-CCccccch-hhhhccCCeEEE-------cCCeeEe
Q 015014 129 MDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLM-DGVTMGFG-IGISGHGRYRIV-------TEKTLLA 199 (414)
Q Consensus 129 ~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav-nG~a~GgG-~~Lala~D~ria-------~~~a~f~ 199 (414)
+|++.+.. . +.......+.....++.+|..+|||+||+| ||+|+||| ++|+++||+||+ +++++|+
T Consensus 334 ~Dl~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~~kpviAav~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~ 408 (546)
T TIGR03222 334 ADALLEAH----K-DHWFVRETIGYLRRTLARLDVSSRSLFALIEPGSCFAGTLAELAFAADRSYMLAFPDNNDPEPAIT 408 (546)
T ss_pred cCcccccc----c-cchhHHHHHHHHHHHHHHHHcCCCCEEEEECCCeEeHHHHHHHHHhCceeeecCCCCCCCCCCEEe
Confidence 99983211 0 111112222233447778999999999999 89999999 999999999999 8999999
Q ss_pred cccccCCCCCChhHHHHHhhCC-CcHHHH--HHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHH
Q 015014 200 MPENGIGLFPDVGFSYIAAKGP-GGGSVG--AYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 276 (414)
Q Consensus 200 ~pe~~~Gl~P~~g~~~~L~r~~-G~~~~a--~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~ 276 (414)
+||+++|++|++|++++|++++ |.+ ++ ++|++||+.|+ |+||+++|||++++|++++.+.+.++++
T Consensus 409 ~~e~~lGl~p~~gg~~~L~~~v~G~~-~a~~~~~~ltg~~i~-A~eA~~~Glv~~vv~~~~l~~~a~~~a~--------- 477 (546)
T TIGR03222 409 LSELNFGLYPMVNGLSRLATRFYAEP-APVAAVRDKIGQALD-AEEAERLGLVTAAPDDIDWEDEIRIALE--------- 477 (546)
T ss_pred CCccccccCCCcCcHHHHHHHhcCch-hHHHHHHHHhCCCCC-HHHHHHcCCcccccCchHHHHHHHHHHH---------
Confidence 9999999999999999999998 987 88 55999999999 9999999999999999888665544433
Q ss_pred HHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHH
Q 015014 277 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 356 (414)
Q Consensus 277 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l 356 (414)
+|+++||.+++.+|+++
T Consensus 478 ---------------------------------------------------------------~la~~~p~a~~~~K~~l 494 (546)
T TIGR03222 478 ---------------------------------------------------------------ERASFSPDALTGLEANL 494 (546)
T ss_pred ---------------------------------------------------------------HHHhcCHHHHHHHHHHH
Confidence 49999999999999999
Q ss_pred HHHHhhcCCCCcccCCHHHH-HHHHHHHHHHhCCCchHHH---HHHhhHhCCCCCCCC
Q 015014 357 SKVASAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAE---GVRAVLVDKDQVLSQ 410 (414)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~-l~~e~~~~~~~~~~~D~~e---Gv~afl~dk~~~P~~ 410 (414)
+... ..++++. +..|...+..++.++|.+| ||++|+ ++|+|+|
T Consensus 495 ~~~~---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~--ekr~p~f 541 (546)
T TIGR03222 495 RFAG---------PETMETRIFGRLTAWQNWIFNRPNAVGENGALKVYG--SGKKAQF 541 (546)
T ss_pred hhcC---------CcChhhhHHHHHHHHHHHHhcCCcccchhhHHHHHc--cCCCCCC
Confidence 9876 6789999 9999999999999999999 999999 7788875
No 71
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=8.5e-47 Score=393.46 Aligned_cols=258 Identities=12% Similarity=0.030 Sum_probs=220.9
Q ss_pred CCccEEEEEe-cCcEEEEEEcCCCCC-------------CCCCHHHHHHHHHHHHHHhc-CCCceEEEEEeCCCCCccCC
Q 015014 64 AEEFVKGNVH-PNGVAVITLDRPKAL-------------NAMNLDMDIKYKSFLDEWES-DPRVKCVLIEGSGPRAFCAG 128 (414)
Q Consensus 64 ~~~~v~~~~~-~~~V~~Itlnrp~~~-------------Nal~~~m~~eL~~~l~~~~~-d~~v~~vVl~g~g~~~FcaG 128 (414)
.|+++.++.. +++|++||||||+++ |+||.+|+.+|.++++.++. |+++|+|||||.|+++||+|
T Consensus 258 ~~~~~~v~~~~~~~va~itlnrP~~~Na~~~~~~~~~~~Nal~~~~~~eL~~al~~~~~~d~~vr~vVltg~G~~~F~aG 337 (550)
T PRK08184 258 RYRHVDVEIDRAARTATITVKAPTAAQPADIAGIVAAGAAWWPLQMARELDDAILHLRTNELDIGTWVLKTEGDAAAVLA 337 (550)
T ss_pred eeEEEEEEEEccCCEEEEEEeCcccccccccccccccccccCCHHHHHHHHHHHHHHHhcCCCeEEEEEEcCCCCcEEeC
Confidence 3555666553 578999999999988 68999999999999999986 79999999999873499999
Q ss_pred CChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEEC-Cccccch-hhhhccCCeEEEc-------CCeeEe
Q 015014 129 MDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMD-GVTMGFG-IGISGHGRYRIVT-------EKTLLA 199 (414)
Q Consensus 129 ~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavn-G~a~GgG-~~Lala~D~ria~-------~~a~f~ 199 (414)
+|++.+.. . +.............++.+|..+||||||+|| |+|+||| ++|+++||+|||+ ++++|+
T Consensus 338 ~Dl~~~~~----~-~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~~G~a~GgG~~eLalacD~~ia~~~~~~~~~~a~f~ 412 (550)
T PRK08184 338 ADATLLAH----K-DHWLVRETRGYLRRTLKRLDVTSRSLFALIEPGSCFAGTLAELALAADRSYMLALPDDNDPAPAIT 412 (550)
T ss_pred CChhhhcc----c-chHHHHHHHHHHHHHHHHHHhCCCCEEEEECCCceehhHHHHHHHHCChhhhcCCCCCCCCCCEEE
Confidence 99873211 0 1101112233334567789999999999997 9999999 9999999999999 999999
Q ss_pred cccccCCCCCChhHHHHHhhC-CCcHHHHHHH--HhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHH
Q 015014 200 MPENGIGLFPDVGFSYIAAKG-PGGGSVGAYL--GMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQ 276 (414)
Q Consensus 200 ~pe~~~Gl~P~~g~~~~L~r~-~G~~~~a~~l--~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~ 276 (414)
+||+++|++|++|++++|+|+ +|.+ +++++ ++||+.|+ |+||+++|||+++||++++++.+.++++
T Consensus 413 ~pe~~~Gl~p~~gg~~~L~r~~vG~~-~A~~~~l~~tg~~i~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~--------- 481 (550)
T PRK08184 413 LSALNFGLYPMVNGLSRLARRFYGEP-DPLAAVRAKIGQPLD-ADAAEELGLVTAAPDDIDWEDEVRIALE--------- 481 (550)
T ss_pred CccccccCCCCCCcHHHhHHHhcChH-HHHHHHHHHhCCcCC-HHHHHHcCCcccccChHHHHHHHHHHHH---------
Confidence 999999999999999999988 7998 99997 59999999 9999999999999999888765555443
Q ss_pred HHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHH
Q 015014 277 DIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYF 356 (414)
Q Consensus 277 ~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l 356 (414)
+|+++||.+++.+|+++
T Consensus 482 ---------------------------------------------------------------~ia~~~p~a~~~~K~~l 498 (550)
T PRK08184 482 ---------------------------------------------------------------ERASLSPDALTGMEANL 498 (550)
T ss_pred ---------------------------------------------------------------HHHhCCHHHHHHHHHHH
Confidence 49999999999999999
Q ss_pred HHHHhhcCCCCcccCCHHHH-HHHHHHHHHHhCCCchHHH---HHHhhHhCCCCCCCCC
Q 015014 357 SKVASAHGKTDNELSKLSGV-MKYEYRVALRSSLRSDFAE---GVRAVLVDKDQVLSQL 411 (414)
Q Consensus 357 ~~~~~~~~~~~~~~~~l~~~-l~~e~~~~~~~~~~~D~~e---Gv~afl~dk~~~P~~~ 411 (414)
+... ..+++++ +..|...+..++.++|.+| |+++|+ ++|+|+|-
T Consensus 499 ~~~~---------~~~~~~~~~~~e~~~~~~~~~~~d~~e~~~g~~af~--ekr~~~f~ 546 (550)
T PRK08184 499 RFAG---------PETMETRIFGRLTAWQNWIFQRPNAVGEKGALKVYG--TGQKAQFD 546 (550)
T ss_pred HhcC---------CCCHHHHHHHHHHHHHHHHhcCCcccccchHHHHhc--cCCCCCCC
Confidence 9876 6789999 9999999999999999999 999999 88889873
No 72
>PRK08290 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=1.8e-46 Score=365.24 Aligned_cols=244 Identities=20% Similarity=0.294 Sum_probs=203.6
Q ss_pred CCCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR 142 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~ 142 (414)
|+++.+.++. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++........
T Consensus 1 ~~~~~v~~~~-~~~Va~ItlnrP~~~Nal~~~~~~eL~~~l~~~~~d~~vrvvVltg~G-~~FcaG~Dl~~~~~~~~~~~ 78 (288)
T PRK08290 1 MEYEYVRYEV-AGRIARITLNRPEARNAQNRQMLYELDAAFRRAEADDAVRVIVLAGAG-KHFSAGHDLGSGTPGRDRDP 78 (288)
T ss_pred CCCceEEEEe-eCCEEEEEecCccccCCCCHHHHHHHHHHHHHHhcCCCeeEEEEECCC-CccccCCCcccccccccccc
Confidence 4567788886 789999999999999999999999999999999999999999999997 89999999998642111000
Q ss_pred --------------CCC---chHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccC
Q 015014 143 --------------NTP---LVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGI 205 (414)
Q Consensus 143 --------------~~~---~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~ 205 (414)
... ...........++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pkPvIAaVnG~a~GgG~~lalacD~ria~e~a~f~~pe~~l 158 (288)
T PRK08290 79 GPDQHPTLWWDGATKPGVEQRYAREWEVYLGMCRRWRDLPKPTIAQVQGACIAGGLMLAWVCDLIVASDDAFFSDPVVRM 158 (288)
T ss_pred ccccccccccccccccchhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeeHHHHHHHHhCCEEEeeCCCEecCccccc
Confidence 000 011112233456678899999999999999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhh
Q 015014 206 GLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKY 285 (414)
Q Consensus 206 Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~ 285 (414)
|+ |+ ++++++++++|.. ++++|++||+.|+ |+||+++|||+++||++++++.+.++++
T Consensus 159 Gl-~~-~~~~~l~~~iG~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~~~a~------------------ 216 (288)
T PRK08290 159 GI-PG-VEYFAHPWELGPR-KAKELLFTGDRLT-ADEAHRLGMVNRVVPRDELEAETLELAR------------------ 216 (288)
T ss_pred Cc-Cc-chHHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCccEeeCHHHHHHHHHHHHH------------------
Confidence 98 54 4567789999998 9999999999999 9999999999999998877655444433
Q ss_pred cCCCCCcchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCC
Q 015014 286 SSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGK 365 (414)
Q Consensus 286 ~~~~~~~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~ 365 (414)
+|++.||.+++.+|+.+++..
T Consensus 217 ------------------------------------------------------~la~~~~~a~~~~K~~~~~~~----- 237 (288)
T PRK08290 217 ------------------------------------------------------RIAAMPPFGLRLTKRAVNQTL----- 237 (288)
T ss_pred ------------------------------------------------------HHHhCCHHHHHHHHHHHHHHH-----
Confidence 499999999999999999876
Q ss_pred CCcccCCHHHHHHHHHHHHHHhC-CCch
Q 015014 366 TDNELSKLSGVMKYEYRVALRSS-LRSD 392 (414)
Q Consensus 366 ~~~~~~~l~~~l~~e~~~~~~~~-~~~D 392 (414)
...+++++++.|.......+ ++++
T Consensus 238 ---~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (288)
T PRK08290 238 ---DAQGFRAALDAVFDLHQLGHAHNAE 262 (288)
T ss_pred ---hhccHHHHHHHHHHHHHHccccchh
Confidence 13369999999999998877 5555
No 73
>PRK05869 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=1.7e-46 Score=352.34 Aligned_cols=193 Identities=20% Similarity=0.259 Sum_probs=167.6
Q ss_pred CccEEEEEe----cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhh
Q 015014 65 EEFVKGNVH----PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQK 140 (414)
Q Consensus 65 ~~~v~~~~~----~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~ 140 (414)
+++|.++.. +++|++|+||||++ |+||.+|+.+|.++++.++.|+++++|||||.| ++||+|+|++++....
T Consensus 2 ~~~~~~~~~~~~~~~~i~~itlnrp~~-Nal~~~~~~~l~~~l~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~-- 77 (222)
T PRK05869 2 NEFVNVVVSDGSQDAGLATLLLSRPPT-NALTRQVYREIVAAANELGRRDDVAAVILYGGH-EIFSAGDDMPELRTLS-- 77 (222)
T ss_pred ccchhhhcccCcccCCEEEEEECCCCC-CCCCHHHHHHHHHHHHHHhcCCCceEEEEECCC-CCcCcCcCHHHHhccC--
Confidence 345555542 58999999999986 999999999999999999999999999999987 8999999999875421
Q ss_pred CCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhC
Q 015014 141 DRNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG 220 (414)
Q Consensus 141 ~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~ 220 (414)
............+++.++.++||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+++
T Consensus 78 ---~~~~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~lalacD~ria~~~a~f~~pe~~~Gl~p~~g~~~~l~~~ 154 (222)
T PRK05869 78 ---AQEADTAARVRQQAVDAVAAIPKPTVAAITGYALGAGLTLALAADWRVSGDNVKFGATEILAGLAPSGDGMARLTRA 154 (222)
T ss_pred ---hhhHHHHHHHHHHHHHHHHhCCCCEEEEEcCEeecHHHHHHHhCCEEEecCCCEEcCchhccCCCCCccHHHHHHHH
Confidence 11112233344567889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHH
Q 015014 221 PGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALL 266 (414)
Q Consensus 221 ~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~ 266 (414)
+|.. +++++++||++++ |+||+++|||++++|++++.+.+.+++
T Consensus 155 ig~~-~a~~l~ltg~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a 198 (222)
T PRK05869 155 AGPS-RAKELVFSGRFFD-AEEALALGLIDEMVAPDDVYDAAAAWA 198 (222)
T ss_pred hCHH-HHHHHHHcCCCcC-HHHHHHCCCCCEeeCchHHHHHHHHHH
Confidence 9997 9999999999999 999999999999999888765544443
No 74
>PRK11730 fadB multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.7e-45 Score=397.40 Aligned_cols=289 Identities=19% Similarity=0.233 Sum_probs=226.1
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.+.++..+++|++||||||+++|+||.+|+.+|.++++.++.|+++|+|||+|+| ++||+|+|++++..... .....
T Consensus 7 ~i~~~~~~~~v~~itlnrp~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVltg~g-~~FcaG~Dl~~~~~~~~--~~~~~ 83 (715)
T PRK11730 7 TLQVDWLEDGIAELVFDAPGSVNKLDRATLASLGEALDALEAQSDLKGLLLTSAK-DAFIVGADITEFLSLFA--APEEE 83 (715)
T ss_pred eEEEEEcCCCEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCcEEEEEECCC-CccccCcCHHHHhhhcc--CCHHH
Confidence 4666644789999999999999999999999999999999999999999999998 89999999998754210 01111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...+......++.++..+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|++++|+|++|.. +
T Consensus 84 ~~~~~~~~~~~~~~i~~~~kPvIAav~G~a~GgG~~LAlacD~ria~~~a~f~~pe~~lGl~p~~g~~~~L~rlvG~~-~ 162 (715)
T PRK11730 84 LSQWLHFANSIFNRLEDLPVPTVAAINGYALGGGCECVLATDYRVASPDARIGLPETKLGIMPGFGGTVRLPRLIGAD-N 162 (715)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEECCEeehHHHHHHHhCCEEEEcCCCEEeCchhhcCCCCCchHHHHHHHhcCHH-H
Confidence 223444556678889999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++||||++||++++.+.+.++++........ ......+...+... ..+++++
T Consensus 163 A~~llltG~~~~-A~eA~~~GLv~~vv~~~~l~~~a~~~a~~la~~~~~--------~~~~~~~~~~p~a~--~~~~~~~ 231 (715)
T PRK11730 163 ALEWIAAGKDVR-AEDALKVGAVDAVVAPEKLQEAALALLKQAIAGKLD--------WKARRQPKLEPLKL--SKIEAMM 231 (715)
T ss_pred HHHHHHcCCcCC-HHHHHHCCCCeEecCHHHHHHHHHHHHHHHhhcCCc--------cccccCcccccccc--cchhHHH
Confidence 999999999999 999999999999999999988888887653211000 00000000000000 0011111
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHH-HHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEAL-QGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVAL 385 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~-~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~ 385 (414)
. ...+++.+ ++..+..|.++ .++++++.+. ..+++++++.|.+.+.
T Consensus 232 ~-----------------------~~~~k~~~~~~~~~~~pa~~-~~~~~i~~~~---------~~~~~~~l~~E~~~~~ 278 (715)
T PRK11730 232 S-----------------------FTTAKGMVAQKAGKHYPAPM-TAVKTIEAAA---------GLGRDEALELEAKGFV 278 (715)
T ss_pred H-----------------------HHHHHHHHHHhhccCCccHH-HHHHHHHHHh---------cCCHHHHHHHHHHHHH
Confidence 1 12333322 34556677776 7777888876 5689999999999999
Q ss_pred HhCCCchHHHHHHhhHhC
Q 015014 386 RSSLRSDFAEGVRAVLVD 403 (414)
Q Consensus 386 ~~~~~~D~~eGv~afl~d 403 (414)
.++.++|++||+++|+.+
T Consensus 279 ~~~~s~d~~egi~aF~~~ 296 (715)
T PRK11730 279 KLAKTNVARALVGIFLND 296 (715)
T ss_pred HHhCCHHHHHHHHHHHHH
Confidence 999999999999999965
No 75
>PRK08788 enoyl-CoA hydratase; Validated
Probab=100.00 E-value=3.8e-45 Score=354.47 Aligned_cols=254 Identities=14% Similarity=0.085 Sum_probs=201.6
Q ss_pred CCCccEEEEE-ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhc-----CCCceEEEEEeCCCCCccCCCChhhHHH
Q 015014 63 GAEEFVKGNV-HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWES-----DPRVKCVLIEGSGPRAFCAGMDIKGVVA 136 (414)
Q Consensus 63 ~~~~~v~~~~-~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~-----d~~v~~vVl~g~g~~~FcaG~Dl~~~~~ 136 (414)
..+.++++.. .+++|++|+|| |+++|+||.+|+.+|.++++++++ |+++++|||+|.++++||+|+|++++..
T Consensus 12 ~~~~~~~i~~e~~~~ia~itl~-p~~~Nal~~~~~~eL~~al~~~~~~~~~~d~~vrvVVltg~~gk~FcaG~Dl~~~~~ 90 (287)
T PRK08788 12 GELSQLRVYYEEERNVMWMYMR-AQPRPCFNLELLDDIMNLQRAIRQRLDDSGLPVDFWVLASDVPGVFNLGGDLALFAE 90 (287)
T ss_pred cccCceEEEEEccCCEEEEEEC-CCCCCCCCHHHHHHHHHHHHHHHhhccCCCCCeEEEEEEcCCCCceEeCcCHHHHhh
Confidence 4555555544 26889999996 999999999999999999999998 8999999999994489999999998753
Q ss_pred HhhhCCCCCchHHHHHHHHHHHHHHh---hCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhH
Q 015014 137 EIQKDRNTPLVPKVFTAEYSLICKIS---EYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGF 213 (414)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~l~~~l~---~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~ 213 (414)
... .........+....+..+..+. .+||||||+|||+|+|||++|+++|||||++++++|++||+++|++|++|+
T Consensus 91 ~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~pkPvIAaV~G~a~GgG~~LalacD~ria~~~a~f~~pev~lGl~p~~g~ 169 (287)
T PRK08788 91 LIR-AGDRDALLAYARACVDGVHAFHRGFGAGAISIALVQGDALGGGFEAALSHHTIIAERGAKMGFPEILFNLFPGMGA 169 (287)
T ss_pred hcc-ccchHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEECCeeehHHHHHHHhCCEEEecCCCEeeCchhhhCcCCCchH
Confidence 111 1111111112222233333333 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcc
Q 015014 214 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEA 293 (414)
Q Consensus 214 ~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 293 (414)
+++|++++|.. ++++|++||+.++ |+||+++||||+++|++++.+.+.++++
T Consensus 170 ~~~l~~~vG~~-~A~ellltG~~l~-A~eA~~~GLV~~vv~~~el~~~a~~~a~-------------------------- 221 (287)
T PRK08788 170 YSFLARRVGPK-LAEELILSGKLYT-AEELHDMGLVDVLVEDGQGEAAVRTFIR-------------------------- 221 (287)
T ss_pred HHHHHHHhhHH-HHHHHHHcCCCCC-HHHHHHCCCCcEecCchHHHHHHHHHHH--------------------------
Confidence 99999999998 9999999999999 9999999999999999887654444332
Q ss_pred hhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCH
Q 015014 294 PLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL 373 (414)
Q Consensus 294 ~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l 373 (414)
+|++. |.+...+|+..+... ..++
T Consensus 222 ----------------------------------------------~ia~~-~~~~~a~k~~~~~~~---------~~~~ 245 (287)
T PRK08788 222 ----------------------------------------------KSKRK-LNGWRAMLRARRRVN---------PLSL 245 (287)
T ss_pred ----------------------------------------------HHhcC-ccHHHHHHHHHHhhc---------cCCH
Confidence 47776 777777777777654 4578
Q ss_pred HHHHHHHHHHHHHhCC-CchHHHHHHhhHh
Q 015014 374 SGVMKYEYRVALRSSL-RSDFAEGVRAVLV 402 (414)
Q Consensus 374 ~~~l~~e~~~~~~~~~-~~D~~eGv~afl~ 402 (414)
++.++.|......++. .+.-++-|..|..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (287)
T PRK08788 246 EELMDITEIWVDAALQLEEKDLRTMERLVR 275 (287)
T ss_pred HHHHHHHHHHHHHHhhcccccHHHHHHHHH
Confidence 9999988777765443 5556677777773
No 76
>KOG1681 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=2.9e-46 Score=336.65 Aligned_cols=266 Identities=21% Similarity=0.309 Sum_probs=225.6
Q ss_pred CCccEEEE--EecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhh-
Q 015014 64 AEEFVKGN--VHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQK- 140 (414)
Q Consensus 64 ~~~~v~~~--~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~- 140 (414)
+|+.+.+. ..++.|.++.||||.|+|+||..|+.|+.++++.+..||+||+|||.|+| ++||+|+|+..+......
T Consensus 17 s~ksl~v~vk~~~~~V~hv~lnRPsk~Nal~~~~w~E~~~cf~~l~~dpdcr~iilsg~G-KhFcaGIDl~~~~~~~~~~ 95 (292)
T KOG1681|consen 17 SYKSLEVSVKSAQPFVYHVQLNRPSKLNALNKVFWREFKECFDSLDRDPDCRAIILSGAG-KHFCAGIDLNDMASDRILQ 95 (292)
T ss_pred ccceeeeeecCCCCeEEEEEecCcchhhhhhHHHHHHHHHHHHhhccCCCceEEEEecCC-cceecccCcchhhhhhccc
Confidence 46655554 34567999999999999999999999999999999999999999999998 999999998877653211
Q ss_pred CCCC------CchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHH
Q 015014 141 DRNT------PLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 214 (414)
Q Consensus 141 ~~~~------~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~ 214 (414)
.... ..++++...+++.+..|.+||||||++|||+|+|||+.|..+||+|+|+++|.|+.-|+.+|+..+.|..
T Consensus 96 ~~~dd~aR~g~~lrr~Ik~~Q~~~t~ie~CpKPVIaavHg~CiGagvDLiTAcDIRycsqDAffsvkEVDvglaADvGTL 175 (292)
T KOG1681|consen 96 PEGDDVARKGRSLRRIIKRYQDTFTAIERCPKPVIAAVHGACIGAGVDLITACDIRYCSQDAFFSVKEVDVGLAADVGTL 175 (292)
T ss_pred cccchHhhhhHHHHHHHHHHHHHHHHHHhCChhHHHHHHhhhccccccceeecceeeecccceeeeeeeeeehhhchhhH
Confidence 1111 1234466666778899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCC-CHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcc
Q 015014 215 YIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG-NLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEA 293 (414)
Q Consensus 215 ~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~-~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 293 (414)
.+||+.+|.++.++++.+|++.|. |.||++.|||.+|+|+. ++...+..
T Consensus 176 ~RlpkvVGn~s~~~elafTar~f~-a~EAl~~GLvSrvf~dk~~ll~~~l~----------------------------- 225 (292)
T KOG1681|consen 176 NRLPKVVGNQSLARELAFTARKFS-ADEALDSGLVSRVFPDKEELLNGALP----------------------------- 225 (292)
T ss_pred hhhhHHhcchHHHHHHHhhhhhcc-hhhhhhcCcchhhcCCHHHHHhhhHH-----------------------------
Confidence 999999996669999999999999 99999999999999973 33332222
Q ss_pred hhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCH
Q 015014 294 PLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKL 373 (414)
Q Consensus 294 ~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l 373 (414)
+++.|+.+||.++..||+.|.+.+ +.+.
T Consensus 226 -------------------------------------------mA~~Ia~KSpvaVqgTK~~L~ysr---------ehsv 253 (292)
T KOG1681|consen 226 -------------------------------------------MAELIASKSPVAVQGTKENLLYSR---------EHSV 253 (292)
T ss_pred -------------------------------------------HHHHhccCCceeeechHHHHHHHh---------hhhh
Confidence 223599999999999999999998 7889
Q ss_pred HHHHHHHHHHHHHhCCCchHHHHHHhhHhCCCCCCCCCcC
Q 015014 374 SGVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQVLSQLKL 413 (414)
Q Consensus 374 ~~~l~~e~~~~~~~~~~~D~~eGv~afl~dk~~~P~~~~~ 413 (414)
++.+..-.-.-...+.++|+.+.+.|-+. |++++.|-||
T Consensus 254 ~~sLnyvatwNms~L~s~Dl~~av~a~m~-k~k~~tfskl 292 (292)
T KOG1681|consen 254 EESLNYVATWNMSMLLSDDLVKAVMAQME-KLKTVTFSKL 292 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCCCCcccC
Confidence 99988766666667789999999999995 5566667665
No 77
>KOG1679 consensus Enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=100.00 E-value=3e-46 Score=333.76 Aligned_cols=252 Identities=19% Similarity=0.258 Sum_probs=226.4
Q ss_pred ecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHH
Q 015014 73 HPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFT 152 (414)
Q Consensus 73 ~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (414)
.+.||.+|-+|||.+.|+|+.-|+++|.++++.+..|+.+|+|+|++.-++.||+|.||++-..+. ++....|..
T Consensus 37 ~~~GItvl~mNRpa~kNsl~r~~~~~l~~~l~~lk~D~~~RvvilrS~vpgvFCaGADLKER~~Ms-----~~Ev~~fV~ 111 (291)
T KOG1679|consen 37 KDEGITILNMNRPAKKNSLGRVFVKQLREVLDELKYDNKVRVVILRSLVPGVFCAGADLKERKTMS-----PSEVTRFVN 111 (291)
T ss_pred CCCCeEEEecCChhhhccHHHHHHHHHHHHHHHHhhCCceeEEEEecCCCceeecCcchHhhhcCC-----HHHHHHHHH
Confidence 356899999999999999999999999999999999999999999998899999999999977643 345566888
Q ss_pred HHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHh
Q 015014 153 AEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGM 232 (414)
Q Consensus 153 ~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~l 232 (414)
....++..+.++|.|+||+|+|.|+|||++|+++||+|||+++++|+++|++++++|+.||+++|+|++|.. .++||++
T Consensus 112 ~lR~~~~dIe~Lp~P~IAAidG~ALGGGLElALACDiRva~s~akmGLvET~laiiPGaGGtQRLpR~vg~a-laKELIf 190 (291)
T KOG1679|consen 112 GLRGLFNDIERLPQPVIAAIDGAALGGGLELALACDIRVAASSAKMGLVETKLAIIPGAGGTQRLPRIVGVA-LAKELIF 190 (291)
T ss_pred HHHHHHHHHHhCCccceehhcchhcccchhhhhhccceehhhhccccccccceeeecCCCccchhHHHHhHH-HHHhHhh
Confidence 888899999999999999999999999999999999999999999999999999999999999999999997 9999999
Q ss_pred cCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCcccH
Q 015014 233 TGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSV 312 (414)
Q Consensus 233 tG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~sv 312 (414)
|++.++ +.||...|||+++|...+-.+.+.
T Consensus 191 tarvl~-g~eA~~lGlVnhvv~qneegdaa~------------------------------------------------- 220 (291)
T KOG1679|consen 191 TARVLN-GAEAAKLGLVNHVVEQNEEGDAAY------------------------------------------------- 220 (291)
T ss_pred hheecc-chhHHhcchHHHHHhcCccccHHH-------------------------------------------------
Confidence 999999 899999999999998654322111
Q ss_pred HHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCCCch
Q 015014 313 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 392 (414)
Q Consensus 313 ~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~D 392 (414)
+-+.+.+++|.-+-|.+++++|..++.+. ..++..++..|....+....+.|
T Consensus 221 -------------------~kal~lA~eilp~gPiavr~aKlAIn~G~---------evdiasgl~iEe~CYaq~i~t~d 272 (291)
T KOG1679|consen 221 -------------------QKALELAREILPQGPIAVRLAKLAINLGM---------EVDIASGLSIEEMCYAQIIPTKD 272 (291)
T ss_pred -------------------HHHHHHHHHhccCCchhhhHHHHHhccCc---------eecccccccHHHHHHHhcCcHHH
Confidence 22333444689999999999999999987 67888999999999999999999
Q ss_pred HHHHHHhhHhCCCCCCCC
Q 015014 393 FAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 393 ~~eGv~afl~dk~~~P~~ 410 (414)
.-||+.+|. ++|+|.+
T Consensus 273 rLeglaaf~--ekr~p~y 288 (291)
T KOG1679|consen 273 RLEGLAAFK--EKRKPEY 288 (291)
T ss_pred HHHHHHHHH--hhcCCCc
Confidence 999999999 7777865
No 78
>PRK08272 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=8e-45 Score=356.25 Aligned_cols=197 Identities=23% Similarity=0.320 Sum_probs=165.2
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCC-
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDR- 142 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~- 142 (414)
.++.|.++. +++|++|+||||+++|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++........
T Consensus 8 ~~~~v~~e~-~~~V~~Itlnrp~~~Nal~~~m~~eL~~al~~~~~d~~vrvvVl~G~G-~~FcaG~Dl~~~~~~~~~~~~ 85 (302)
T PRK08272 8 NLKTMTYEV-TGRIARITLNRPEKGNAITADTPLELRAAVERADLDPGVHVILVSGAG-KGFCAGYDLSAYAEGSSSGGG 85 (302)
T ss_pred CCCeEEEEe-ECCEEEEEecCccccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCC-CCcccCcCHHHHhhccccccc
Confidence 467788887 789999999999999999999999999999999999999999999998 89999999999864221000
Q ss_pred CC--------------CchH-----HHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccc
Q 015014 143 NT--------------PLVP-----KVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 203 (414)
Q Consensus 143 ~~--------------~~~~-----~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~ 203 (414)
.. .... .++.....++..|.++||||||+|||+|+|||++|+++||+|||+++++|++||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~~ias~~a~f~~pe~ 165 (302)
T PRK08272 86 GGAYPGKRQAVNHLPDDPWDPMIDYQMMSRFVRGFMSLWHAHKPTVAKVHGYCVAGGTDIALHCDQVIAADDAKIGYPPT 165 (302)
T ss_pred ccccccccccccccccccccchhhHHHHHHHHHHHHHHHhCCCCEEEEEccEeehhhHHHHHhCCEEEEeCCCEecCcch
Confidence 00 0000 1234445677789999999999999999999999999999999999999999999
Q ss_pred cCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHH
Q 015014 204 GIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLA 267 (414)
Q Consensus 204 ~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~ 267 (414)
++|.+|+.+ .+++++|.+ ++++|+|||++|+ |+||+++|||+++||++++++.+.++++
T Consensus 166 ~~gg~~~~~---~~~~~vG~~-~A~~llltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a~~la~ 224 (302)
T PRK08272 166 RVWGVPATG---MWAYRLGPQ-RAKRLLFTGDCIT-GAQAAEWGLAVEAVPPEELDERTERLVE 224 (302)
T ss_pred hcccCChHH---HHHHHhhHH-HHHHHHHcCCccC-HHHHHHcCCCceecCHHHHHHHHHHHHH
Confidence 986666432 567889998 9999999999999 9999999999999998887665544443
No 79
>PRK06213 enoyl-CoA hydratase; Provisional
Probab=100.00 E-value=3e-44 Score=339.00 Aligned_cols=223 Identities=22% Similarity=0.206 Sum_probs=192.6
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
.|.++. +++|++||||||+ .|++|.+|+.+|.++++.++ +++++|||+|.| ++||+|+|++++... ...
T Consensus 4 ~i~~~~-~~~v~~itln~~~-~Nal~~~~~~~l~~~l~~~~--~~~~vvvl~g~g-~~F~~G~Dl~~~~~~------~~~ 72 (229)
T PRK06213 4 LVSYTL-EDGVATITLDDGK-VNALSPAMIDALNAALDQAE--DDRAVVVITGQP-GIFSGGFDLKVMTSG------AQA 72 (229)
T ss_pred eEEEEe-cCCEEEEEeCCCC-CCCCCHHHHHHHHHHHHHhh--ccCcEEEEeCCC-CceEcCcCHHHHhcc------hHh
Confidence 577776 7899999999985 69999999999999999988 457999999997 899999999987531 112
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC-eeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
...++....+++.++.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|+.|+.+++++.+|..
T Consensus 73 ~~~~~~~~~~l~~~l~~~~kPvIAav~G~a~GgG~~lal~~D~rva~~~~a~f~~pe~~~Gl~~~~~~~~~l~~~~g~~- 151 (229)
T PRK06213 73 AIALLTAGSTLARRLLSHPKPVIVACTGHAIAKGAFLLLSADYRIGVHGPFKIGLNEVAIGMTMPHAAIELARDRLTPS- 151 (229)
T ss_pred HHHHHHHHHHHHHHHHcCCCCEEEEEcCeeeHHHHHHHHhCCeeeEecCCcEEECchhhhCCcCChHHHHHHHHHcCHH-
Confidence 2334555567788999999999999999999999999999999999999 99999999999998888888899999987
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSC 305 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~ 305 (414)
.+++|++||++++ |+||+++||||+++|++++.+.+.+++
T Consensus 152 ~a~~lll~g~~~~-a~eA~~~Glv~~vv~~~~l~~~a~~~a--------------------------------------- 191 (229)
T PRK06213 152 AFQRAVINAEMFD-PEEAVAAGFLDEVVPPEQLLARAQAAA--------------------------------------- 191 (229)
T ss_pred HHHHHHHcCcccC-HHHHHHCCCceeccChHHHHHHHHHHH---------------------------------------
Confidence 9999999999999 999999999999999887765443333
Q ss_pred cCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 306 FSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 306 F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
++|++.||.+++.+|++++... ...+.+.++.|.+.
T Consensus 192 ---------------------------------~~la~~~~~a~~~~K~~l~~~~---------~~~l~~~~~~~~~~ 227 (229)
T PRK06213 192 ---------------------------------RELAGLNMGAHAATKLKVRAAA---------LEAIRAAIEGDAAE 227 (229)
T ss_pred ---------------------------------HHHhcCCHHHHHHHHHHHHHHH---------HHHHHhchhhhhhh
Confidence 3589999999999999999875 45678888777664
No 80
>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed
Probab=100.00 E-value=1.2e-43 Score=382.97 Aligned_cols=284 Identities=20% Similarity=0.229 Sum_probs=223.2
Q ss_pred EEEEEecCcEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 68 VKGNVHPNGVAVITLDRP-KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 68 v~~~~~~~~V~~Itlnrp-~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
+.++..+++|++|||||| ++.|+||.+|+.+|.++++.++.|+++|+|||+|.++++||+|+|++++.... ....
T Consensus 7 ~~~~~~~~~va~itlnrp~~~~Nal~~~~~~~L~~~l~~~~~d~~vr~vVl~~~~~~~F~aG~Dl~~~~~~~----~~~~ 82 (708)
T PRK11154 7 FTLNVREDNIAVITIDVPGEKMNTLKAEFAEQVRAILKQLREDKELKGVVFISGKPDNFIAGADINMLAACK----TAQE 82 (708)
T ss_pred EEEEEcCCCEEEEEECCCCCCCcCCCHHHHHHHHHHHHHHHhCCCceEEEEecCCCCCcccCcChHHhhccC----CHHH
Confidence 455655789999999999 68999999999999999999999999999999997668999999999875311 1111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC--eeEecccccCCCCCChhHHHHHhhCCCcH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGG 224 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~ 224 (414)
...+......++.+|.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|++++|..
T Consensus 83 ~~~~~~~~~~~~~~i~~~~kPvIAaV~G~a~GgG~~LalacD~ria~~~a~a~fg~pe~~lGl~p~~gg~~~L~r~vG~~ 162 (708)
T PRK11154 83 AEALARQGQQLFAEIEALPIPVVAAIHGACLGGGLELALACHYRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS 162 (708)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeechHHHHHHhCCEEEEeCCCCceEeCccccCCCCCCccHHhHHHhhcCHH
Confidence 2223344456788999999999999999999999999999999999996 48999999999999999999999999998
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||++++ |+||+++||||+++|++++.+.+.++++......+....... +
T Consensus 163 -~A~~llltG~~i~-a~eA~~~GLv~~vv~~~~l~~~a~~~A~~~~~~~~~~~~~~~--------------------~-- 218 (708)
T PRK11154 163 -TALDMILTGKQLR-AKQALKLGLVDDVVPHSILLEVAVELAKKGKPARRPLPVRER--------------------L-- 218 (708)
T ss_pred -HHHHHHHhCCcCC-HHHHHHCCCCcEecChHHHHHHHHHHHHhcCCccCcCCchhh--------------------h--
Confidence 9999999999999 999999999999999999988888887652100000000000 0
Q ss_pred hcCCc-ccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHH
Q 015014 305 CFSSE-KSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRV 383 (414)
Q Consensus 305 ~F~~~-~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~ 383 (414)
...+ ..-..+ .+.+.+.+.+-.++.-.++..+|++++.+. ..+++++++.|.+.
T Consensus 219 -~~~~p~~~~~~---------------~~~~~~~~~~~~~g~~~A~~~~k~~i~~~~---------~~~~~~~l~~E~~~ 273 (708)
T PRK11154 219 -LEGNPLGRALL---------------FKQARKKTLAKTQGNYPAPERILDVVRTGL---------EKGMSSGYEAEARA 273 (708)
T ss_pred -cccCchhHHHH---------------HHHHHHHHHHhcccCChHHHHHHHHHHHHh---------cCCHHHHHHHHHHH
Confidence 0000 000000 122222222223334479999999999876 66899999999999
Q ss_pred HHHhCCCchHHHHHHhhHhCC
Q 015014 384 ALRSSLRSDFAEGVRAVLVDK 404 (414)
Q Consensus 384 ~~~~~~~~D~~eGv~afl~dk 404 (414)
+..++.++|++||+.+|+.++
T Consensus 274 ~~~~~~s~~~~~~~~aF~~~~ 294 (708)
T PRK11154 274 FGELAMTPESAALRSIFFATT 294 (708)
T ss_pred HHHHhCCHHHHHHHHHHHHHH
Confidence 999999999999999999653
No 81
>TIGR03200 dearomat_oah 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase. Members of this protein family are 6-oxocyclohex-1-ene-1-carbonyl-CoA hydrolase, a ring-hydrolyzing enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=1.8e-43 Score=346.53 Aligned_cols=286 Identities=19% Similarity=0.150 Sum_probs=209.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
+++|+||||+++|++|.+|+.+|.++++.++.|+++++|||||.|+++||+|+|++++...... .......+.....+
T Consensus 38 ~A~ItLNRP~k~NAls~~ml~eL~~al~~~~~D~dVrvVVLTG~G~kaFCAG~DLke~~~~~~~--~~~~~~~~~~~~~~ 115 (360)
T TIGR03200 38 NAWIILDNPKQYNSYTTDMVKAIILAFRRASSDRDVVAVVFTAVGDKAFCTGGNTKEYAEYYAG--NPQEYRQYMRLFND 115 (360)
T ss_pred EEEEEECCCCccCCCCHHHHHHHHHHHHHHhhCCCceEEEEEcCCCCcccCCcCHHHHhhhccc--ChhHHHHHHHHHHH
Confidence 5669999999999999999999999999999999999999999986799999999987652111 11122334444456
Q ss_pred HHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCC
Q 015014 157 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKR 236 (414)
Q Consensus 157 l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~ 236 (414)
++..+..+||||||+|||+|+|||++|+++||+||++++++|++||+++|++|++|++++|++++|.. +++++++||++
T Consensus 116 l~~~i~~~pKPVIAAVnG~AiGGGleLALaCDlrIAse~A~Fg~PE~rlGl~P~~Ggt~rLprlvG~~-rA~~llltGe~ 194 (360)
T TIGR03200 116 MVSAILGCDKPVICRVNGMRIGGGQEIGMAADFTIAQDLANFGQAGPKHGSAPIGGATDFLPLMIGCE-QAMVSGTLCEP 194 (360)
T ss_pred HHHHHHhCCCCEEEEECCEeeeHHHHHHHhCCEEEEcCCCEEeCchhccCCCCCccHHHHHHHhhCHH-HHHHHHHhCCc
Confidence 77889999999999999999999999999999999999999999999999999999999999999998 99999999999
Q ss_pred CCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCc----chhhhhHHHHHhhcCCcccH
Q 015014 237 ISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGE----APLKLLLPQITSCFSSEKSV 312 (414)
Q Consensus 237 i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~----~~~~~~~~~i~~~F~~~~sv 312 (414)
++ |+||+++|||+++||+.+++. .+..+|.-...+++..+......+ ..+....+.++++=.+..-+
T Consensus 195 ~s-A~EA~~~GLVd~VVp~~~~~~--------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~l 265 (360)
T TIGR03200 195 WS-AHKAKRLGIIMDVVPALKVDG--------KFVANPLVVTDRYLDEFGRIVHGEFKAGDELKAGKELIKQGTIDLSLL 265 (360)
T ss_pred Cc-HHHHHHcCChheecCchhcCc--------chhcCcccchHHHHHHHhHHhcCCCcchhHHHHHHHHHhcccchHhHH
Confidence 99 999999999999999877631 122233322233333322111111 12222222222111111011
Q ss_pred HHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCCCch
Q 015014 313 RQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSD 392 (414)
Q Consensus 313 ~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~D 392 (414)
.+-..+...++...-|.++.-+++.+|... ...+...-+.-..-+...+. .+
T Consensus 266 ------------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-~~ 317 (360)
T TIGR03200 266 ------------------DEAVEALCAKLLNTFPECLTKSIEELRKPK---------LFAWNQNKENSRAWLALNMM-NE 317 (360)
T ss_pred ------------------HHHHHHHHHHHHHhchHHHHHHHHHhhhHH---------HHHHHhhhhhhHHHHHhhcc-cc
Confidence 222233444578888899999999999765 33444444444444433333 88
Q ss_pred HHHHHHhhHh
Q 015014 393 FAEGVRAVLV 402 (414)
Q Consensus 393 ~~eGv~afl~ 402 (414)
..+|++||-.
T Consensus 318 ~~~~~~~~~~ 327 (360)
T TIGR03200 318 ARTGFRAFNE 327 (360)
T ss_pred cchhhHHHhc
Confidence 9999999985
No 82
>TIGR02440 FadJ fatty oxidation complex, alpha subunit FadJ. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Plays a minor role in aerobic beta-oxidation of fatty acids. FadJI complex is necessary for anaerobic growth on short-chain acids with nitrate as an electron acceptor. Activities include: enoyl-CoA hydratase (EC 4.2.1.17),3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadJ (aka YfcX). This model excludes the FadB of TIGR02437 equivalog.
Probab=100.00 E-value=1.2e-43 Score=382.14 Aligned_cols=281 Identities=17% Similarity=0.215 Sum_probs=220.7
Q ss_pred EEEecCcEEEEEEcCC-CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEE-eCCCCCccCCCChhhHHHHhhhCCCCCch
Q 015014 70 GNVHPNGVAVITLDRP-KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIE-GSGPRAFCAGMDIKGVVAEIQKDRNTPLV 147 (414)
Q Consensus 70 ~~~~~~~V~~Itlnrp-~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~-g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~ 147 (414)
++..+++|++|||||| ++.|+||.+|+.+|.++++.++.|+++|+|||+ |.| ++||+|+|++++.... .....
T Consensus 4 ~~~~~~~Va~itlnrp~~~~Nal~~~~~~eL~~~l~~~~~d~~vr~VVl~~g~g-~~FcaG~Dl~~~~~~~----~~~~~ 78 (699)
T TIGR02440 4 LTVREDGIAILTIDVPGEKMNTLKAEFADQVSEILSQLKRDKSIRGLVLVSGKP-DNFIAGADISMLAACQ----TAGEA 78 (699)
T ss_pred EEEcCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC-CceeeccCchhhhccC----ChhHH
Confidence 3444789999999999 689999999999999999999999999999974 565 8999999999875311 11122
Q ss_pred HHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC--eeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 148 PKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 148 ~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
..+......++..|.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|++++|+|++|..
T Consensus 79 ~~~~~~~~~~~~~l~~~~kPvIAaVnG~a~GgG~~LaLacD~ria~~~~~a~fg~pev~lGl~p~~g~~~~L~r~vG~~- 157 (699)
T TIGR02440 79 KALAQQGQVLFAELEALPIPVVAAIHGACLGGGLELALACHSRVCSDDDKTVLGLPEVQLGLLPGSGGTQRLPRLIGVS- 157 (699)
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCcEEechhhcccCCCCccHHHHHHHhcCHH-
Confidence 234444566778899999999999999999999999999999999986 79999999999999999999999999998
Q ss_pred HHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhc-CCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHh
Q 015014 226 VGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTF-SEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITS 304 (414)
Q Consensus 226 ~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 304 (414)
++++|++||+.++ |+||+++||||+++|++++.+.+.+++.+.. ...+. .... +....+
T Consensus 158 ~A~~llltG~~~~-a~eA~~~GLV~~vv~~~~l~~~a~~~A~~~~~~~~~~-~~~~---~~~~~~--------------- 217 (699)
T TIGR02440 158 TALDMILTGKQLR-AKQALKLGLVDDVVPQSILLDTAVEMALKGKPIRKPL-SLQE---RLLEGT--------------- 217 (699)
T ss_pred HHHHHHHcCCcCC-HHHHHhCCCCcEecChhHHHHHHHHHHHhCCCCCCCc-cchh---hhcccC---------------
Confidence 9999999999999 9999999999999999999888888875300 00000 0000 000000
Q ss_pred hcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHH
Q 015014 305 CFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVA 384 (414)
Q Consensus 305 ~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~ 384 (414)
+.....++ +++.+.+.+-.+..-.+...+|+.++.+. ..+++++++.|.+.+
T Consensus 218 ----~~a~~~~~---------------~~~~k~~~~~~~~~~~a~~~~~~~i~~~~---------~~~~~~~l~~E~~~~ 269 (699)
T TIGR02440 218 ----PLGRALLF---------------DQAAKKTAKKTQGNYPAAERILDVVRQGL---------AQGMQKGLDAEARAF 269 (699)
T ss_pred ----chhHHHHH---------------HHHHHHHHHhcccCChhHHHHHHHHHHHh---------cCCHHHHHHHHHHHH
Confidence 00001111 12222222234445678888999999887 678999999999999
Q ss_pred HHhCCCchHHHHHHhhHhCC
Q 015014 385 LRSSLRSDFAEGVRAVLVDK 404 (414)
Q Consensus 385 ~~~~~~~D~~eGv~afl~dk 404 (414)
..++.++|.++++++|+.++
T Consensus 270 ~~~~~s~~~~~~~~~f~~~~ 289 (699)
T TIGR02440 270 GELVMTPESAALRSIFFATT 289 (699)
T ss_pred HHhcCCHHHHHHHHHHHHHH
Confidence 99999999999999999753
No 83
>TIGR02437 FadB fatty oxidation complex, alpha subunit FadB. Members represent alpha subunit of multifunctional enzyme complex of the fatty acid degradation cycle. Activities include: enoyl-CoA hydratase (EC 4.2.1.17), dodecenoyl-CoA delta-isomerase activity (EC 5.3.3.8), 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35), 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3). A representative is E. coli FadB. This model excludes the FadJ family represented by SP:P77399.
Probab=100.00 E-value=7.3e-43 Score=376.32 Aligned_cols=290 Identities=18% Similarity=0.208 Sum_probs=221.3
Q ss_pred cEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 67 FVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 67 ~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
++.++..+++|++|+||||++.|+||.+|+.+|.++++.++.|+++++|||+|.| ++||+|+|++++..... .....
T Consensus 7 ~i~~~~~~~gva~Itlnrp~~~Nal~~~~~~eL~~al~~~~~d~~vr~vVltg~g-~~F~aG~Dl~~~~~~~~--~~~~~ 83 (714)
T TIGR02437 7 TIQVTALEDGIAELKFDAPGSVNKFDRATLASLDQALDAIKAQSSLKGVILTSGK-DAFIVGADITEFLGLFA--LPDAE 83 (714)
T ss_pred eEEEEEccCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CccccCcCHHHHhhccc--CCHHH
Confidence 5677755789999999999999999999999999999999999999999999997 79999999999854210 01111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSV 226 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~ 226 (414)
...+......++..|.++||||||+|||+|+|||++|+++||||||+++++|++||+++|++|++|++++|+|++|.. +
T Consensus 84 ~~~~~~~~~~~~~~i~~~pkPvIAai~G~alGGGleLalacD~ria~~~a~fglPEv~lGl~Pg~Ggt~rL~rliG~~-~ 162 (714)
T TIGR02437 84 LIQWLLFANSIFNKLEDLPVPTVAAINGIALGGGCECVLATDFRIADDTAKIGLPETKLGIMPGFGGTVRLPRVIGAD-N 162 (714)
T ss_pred HHHHHHHHHHHHHHHHhCCCCEEEEECCeeecHHHHHHHhCCEEEEeCCCEEecchhhcCCCCCccHHHHHHHHhCHH-H
Confidence 223344455678899999999999999999999999999999999999999999999999999999999999999998 9
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhc
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCF 306 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F 306 (414)
+++|++||++++ |+||+++||||+++|++++.+.+.+++......... ......+....+ ....+.++|
T Consensus 163 A~~llltG~~~~-A~eA~~~GLvd~vv~~~~l~~~a~~~a~~~~~~~~~--------~~~~~~~~~~~~--~~~~~~~~~ 231 (714)
T TIGR02437 163 ALEWIASGKENR-AEDALKVGAVDAVVTADKLGAAALQLLKDAINGKLD--------WKAKRQPKLEPL--KLSKIEAMM 231 (714)
T ss_pred HHHHHHcCCcCC-HHHHHHCCCCcEeeChhHHHHHHHHHHHHHhhcCCc--------ccccCCCCcccc--cccchHHHH
Confidence 999999999999 999999999999999999988888877552211000 000000000000 001112221
Q ss_pred CCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHH
Q 015014 307 SSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALR 386 (414)
Q Consensus 307 ~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~ 386 (414)
. .+++.+.+.+-....-.+-..+.+.++.+. ..+++++++.|.+.+..
T Consensus 232 ~-----------------------~~~~~~~~~~~~~~~~pap~~~~~~v~~~~---------~~~~~~gl~~E~~~f~~ 279 (714)
T TIGR02437 232 S-----------------------FTTAKGMVAQVAGPHYPAPMTAVKTIEKAA---------RFGRDKALEIEAKGFVK 279 (714)
T ss_pred H-----------------------HHHHHHHHHHhhcCCCCCHHHHHHHHHHHh---------cCCHHHHHHHHHHHHHH
Confidence 1 122222222223332223333445677665 56799999999999999
Q ss_pred hCCCchHHHHHHhhHhC
Q 015014 387 SSLRSDFAEGVRAVLVD 403 (414)
Q Consensus 387 ~~~~~D~~eGv~afl~d 403 (414)
++.+++.+..++.|+.+
T Consensus 280 l~~s~~a~~l~~~ff~~ 296 (714)
T TIGR02437 280 LAKTSEAKALIGLFLND 296 (714)
T ss_pred HhCCHHHHHHHHHHhhh
Confidence 99999999999999975
No 84
>COG0447 MenB Dihydroxynaphthoic acid synthase [Coenzyme metabolism]
Probab=100.00 E-value=3.3e-43 Score=314.73 Aligned_cols=261 Identities=22% Similarity=0.254 Sum_probs=215.4
Q ss_pred CCccEEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeC--CCCCccCCCChhhHHHHhhhC
Q 015014 64 AEEFVKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGS--GPRAFCAGMDIKGVVAEIQKD 141 (414)
Q Consensus 64 ~~~~v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~--g~~~FcaG~Dl~~~~~~~~~~ 141 (414)
.|+.|+|+...++|+.|+||||+++||+.+..+.||.+++..+..|++|.+|||||. |+++||+|+|-+--.... .-
T Consensus 16 ~y~dI~Y~~~~~giakItinRPevrNAfrP~TV~Em~~Af~~Ar~d~~vGvi~lTG~~~G~~AFCsGGDQ~vRg~~~-gY 94 (282)
T COG0447 16 GYEDITYEKSVDGIAKITINRPEVRNAFRPKTVDEMIDAFADARDDPNVGVILLTGNGDGDKAFCSGGDQKVRGDSG-GY 94 (282)
T ss_pred CcceeEEeeccCceEEEEecChhhhccCCCccHHHHHHHHHhhhcCCCccEEEEecCCCCCeeeecCCCceecccCC-Cc
Confidence 578899998558999999999999999999999999999999999999999999975 789999999987543311 00
Q ss_pred CCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCC
Q 015014 142 RNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGP 221 (414)
Q Consensus 142 ~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~ 221 (414)
.+.+... .-...++-+.|+.+||||||.|+|+|+|||-.|-+.||+-||+++|+|++...++|-+-++.++..|.|++
T Consensus 95 ~~d~~~~--rLnvLdlQrlIR~~PKpViA~V~G~AiGGGhvlhvvCDLTiAa~nA~FgQTgp~VGSFD~G~Gs~ylar~V 172 (282)
T COG0447 95 VDDDGIP--RLNVLDLQRLIRTMPKPVIAMVAGYAIGGGHVLHVVCDLTIAADNAIFGQTGPKVGSFDGGYGSSYLARIV 172 (282)
T ss_pred cCCccCc--ccchhhHHHHHHhCCcceEEEEeeEeccCccEEEEEeeeeeehhcchhcCCCCCcccccCcccHHHHHHHh
Confidence 1111111 11223455688999999999999999999999999999999999999999999999987777777899999
Q ss_pred CcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHH
Q 015014 222 GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQ 301 (414)
Q Consensus 222 G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 301 (414)
|.. +|+|+.+.++.++ |+||+++|+||.|||.++|++..
T Consensus 173 GqK-kArEIwfLcR~Y~-A~eal~MGlVN~Vvp~~~LE~e~--------------------------------------- 211 (282)
T COG0447 173 GQK-KAREIWFLCRQYD-AEEALDMGLVNTVVPHADLEKET--------------------------------------- 211 (282)
T ss_pred hhh-hhHHhhhhhhhcc-HHHHHhcCceeeeccHHHHHHHH---------------------------------------
Confidence 997 9999999999999 99999999999999999987644
Q ss_pred HHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHH
Q 015014 302 ITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEY 381 (414)
Q Consensus 302 i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~ 381 (414)
..|++ .|.++||++++.-|-+++.. ..++...-+..-
T Consensus 212 -----------------------------v~W~~----E~l~kSP~AlR~LK~Afnad----------~DGlaG~q~~ag 248 (282)
T COG0447 212 -----------------------------VQWAR----EMLAKSPTALRMLKAAFNAD----------CDGLAGLQELAG 248 (282)
T ss_pred -----------------------------HHHHH----HHHhcChHHHHHHHHHhcCC----------CchhhHHHHhcc
Confidence 35665 38899999999999999853 233433323333
Q ss_pred HHHHHhCCCchHHHHHHhhHhCCCCCCCCCcC
Q 015014 382 RVALRSSLRSDFAEGVRAVLVDKDQVLSQLKL 413 (414)
Q Consensus 382 ~~~~~~~~~~D~~eGv~afl~dk~~~P~~~~~ 413 (414)
....-...+++.+||-.||+ ++|+|.||+|
T Consensus 249 ~at~L~YmTdEa~EGr~AF~--eKR~Pdf~~f 278 (282)
T COG0447 249 NATLLYYMTDEAQEGRDAFL--EKRKPDFSKF 278 (282)
T ss_pred cceEEEEechhhhhhHHHHh--hccCCChHhc
Confidence 33333456999999999999 8999999986
No 85
>TIGR02441 fa_ox_alpha_mit fatty acid oxidation complex, alpha subunit, mitochondrial. Members represent alpha subunit of mitochondrial multifunctional fatty acid degradation enzyme complex. Subunit activities include: enoyl-CoA hydratase (EC 4.2.1.17) & 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35). Some characterization in human, pig, and rat. The beta subunit has activity: acetyl-CoA C-acyltransferase (EC 2.3.1.16).
Probab=100.00 E-value=5.3e-41 Score=362.66 Aligned_cols=299 Identities=20% Similarity=0.208 Sum_probs=217.3
Q ss_pred cccccCCCccEEEEEecCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEE-EEEeCCCCCccCCCChhhHH
Q 015014 58 TMAAAGAEEFVKGNVHPNGVAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCV-LIEGSGPRAFCAGMDIKGVV 135 (414)
Q Consensus 58 ~~~~~~~~~~v~~~~~~~~V~~Itlnrp~-~~Nal~~~m~~eL~~~l~~~~~d~~v~~v-Vl~g~g~~~FcaG~Dl~~~~ 135 (414)
++.+.|.++.+.++. +++|++||||||+ +.|+||.+|+.+|.++++.++.|+++|+| |++|.| ++||+|+|++++.
T Consensus 5 ~~~~~~~~~~~~~~~-~~gVa~itlnrP~~~~Nal~~~~~~~L~~al~~~~~d~~vr~vVvltg~g-~~F~aG~Dl~~~~ 82 (737)
T TIGR02441 5 TSAALMARTHRHYEV-KGDVAVVKIDSPNSKVNTLSKELFAEFKEVMNELWTNEAIKSAVLISGKP-GSFVAGADIQMIA 82 (737)
T ss_pred CCCCCCCCCeEEEEE-ECCEEEEEEcCCCCCCCCCCHHHHHHHHHHHHHHhhCCCCEEEEEEECCC-CcceeCcCHHHHh
Confidence 333446778888887 7999999999998 58999999999999999999999999975 568887 8999999999885
Q ss_pred HHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC--eeEecccccCCCCCChhH
Q 015014 136 AEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENGIGLFPDVGF 213 (414)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~~Gl~P~~g~ 213 (414)
.. ........+......++.+|.++||||||+|||+|+|||++|+++||||||+++ ++|++||+++|++|++|+
T Consensus 83 ~~----~~~~~~~~~~~~~~~l~~~i~~~~kPvIAav~G~a~GgG~eLALacD~ria~~~a~a~fglpEv~lGl~Pg~Gg 158 (737)
T TIGR02441 83 AC----KTAQEVTQLSQEGQEMFERIEKSQKPIVAAISGSCLGGGLELALACHYRIATKDRKTLLGLPEVMLGLLPGAGG 158 (737)
T ss_pred cc----CChHHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeecHHHHHHHhCCEEEEcCCCCCeEecchhhhCCCCCccH
Confidence 31 111122334445567888999999999999999999999999999999999997 589999999999999999
Q ss_pred HHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCC-------------CCHHHHHHHHHHhhcCCCcHHHHHH
Q 015014 214 SYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPS-------------GNLGSLKEALLAVTFSEDPHQDIVA 280 (414)
Q Consensus 214 ~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~-------------~~l~~~~~~l~~~~~~~~~~~~~~~ 280 (414)
+++|+|++|.. ++++|++||++++ |+||+++||||+|||+ +++.+.+.+++........
T Consensus 159 t~rLprliG~~-~A~~l~ltG~~i~-a~eA~~~GLVd~vv~~~~~~~~~l~~~~~~~l~~~A~~~a~~l~~~~~------ 230 (737)
T TIGR02441 159 TQRLPKLTGVP-AALDMMLTGKKIR-ADRAKKMGIVDQLVDPLGPGLKPAEENTIEYLEEVAVKFAQGLANGKL------ 230 (737)
T ss_pred hhhHHHhhCHH-HHHHHHHcCCcCC-HHHHHHCCCCeEecCCcccccccchhhhHHHHHHHHHHHHHHhhcccC------
Confidence 99999999998 9999999999999 9999999999999986 2233444333322110000
Q ss_pred HHHhhcCCCCCcchhhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHH
Q 015014 281 LLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVA 360 (414)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~ 360 (414)
..+++....+..... ....+..-..+ .+.+++.+.+=.+....+-..+.+.+..+.
T Consensus 231 ~~~~~~~~~~~~~~~---------~~~~~~~~~~~---------------~~~~~~~~~~~~~g~~~Ap~~~l~~v~~~~ 286 (737)
T TIGR02441 231 SINRDKGLVHKITQY---------VMTNPFVRQQV---------------YKTAEDKVMKQTKGLYPAPLKILDVVRTGY 286 (737)
T ss_pred CccccccccCccchh---------hcccchhHHHH---------------HHHHHHHHHHhccCCCccHHHHHHHHHHHh
Confidence 000000000000000 00000000111 112222222223332344455566777765
Q ss_pred hhcCCCCcccCCHHHHHHHHHHHHHHhCCCchHHHHHHhhHhC
Q 015014 361 SAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVD 403 (414)
Q Consensus 361 ~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~D~~eGv~afl~d 403 (414)
..+++++++.|.+.+..++.+++.+.-+..|+.+
T Consensus 287 ---------~~~~~~gl~~E~~~f~~l~~s~~a~al~~~f~~~ 320 (737)
T TIGR02441 287 ---------DQGPDAGYEAESKAFGELSMTFESKALIGLFHGQ 320 (737)
T ss_pred ---------cCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 5679999999999999999999999999999865
No 86
>PLN02267 enoyl-CoA hydratase/isomerase family protein
Probab=100.00 E-value=2.7e-41 Score=320.54 Aligned_cols=190 Identities=15% Similarity=0.166 Sum_probs=156.5
Q ss_pred EEEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCce-EEEEEeCCCCCccCCCChhhHHHHhhhCCCCCc
Q 015014 68 VKGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVK-CVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPL 146 (414)
Q Consensus 68 v~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~-~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~ 146 (414)
+.++. +++|++|+||||++ |+||.+|+.+|.++++.++.|++++ +||++|.| ++||+|+|++++... ......
T Consensus 2 ~~~~~-~~~v~~i~Lnrp~~-Nal~~~~~~eL~~al~~~~~d~~~~~vVV~~g~g-~~FsaG~Dl~~~~~~---~~~~~~ 75 (239)
T PLN02267 2 CTLEK-RGNLFILTLTGDGE-HRLNPTLIDSIRSALRQVKSQATPGSVLITTAEG-KFFSNGFDLAWAQAA---GSAPSR 75 (239)
T ss_pred ceeEe-cCCEEEEEeCCCCc-CcCCHHHHHHHHHHHHHHHhCCCCceEEEEcCCC-CceeCCcCHHHHhcc---ccCHHH
Confidence 45665 78999999999986 9999999999999999999999875 77778876 899999999976421 011111
Q ss_pred hHHHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEc-CCeeEecccccCCCCCChhHHHHHhhCCCcHH
Q 015014 147 VPKVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVT-EKTLLAMPENGIGLFPDVGFSYIAAKGPGGGS 225 (414)
Q Consensus 147 ~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~-~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~ 225 (414)
...+.....+++.++.++||||||+|||+|+|||++|+++||+|||+ ++++|++||+++|++|+.+++++|++.+|..
T Consensus 76 ~~~~~~~~~~~~~~l~~~~kPvIAaV~G~a~GgG~~lalacD~ria~~~~a~f~~pe~~~Gl~~p~~~~~~l~~~vG~~- 154 (239)
T PLN02267 76 LHLMVAKLRPLVADLISLPMPTIAAVTGHASAAGFILALSHDYVLMRKDRGVLYMSEVDIGLPLPDYFMALLRAKIGSP- 154 (239)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEECCcchHHHHHHHHHCCEEEecCCCCeEeccccccCCCCChHHHHHHHHHcChH-
Confidence 12233444567788999999999999999999999999999999998 5689999999999974444588999999987
Q ss_pred HH-HHHHhcCCCCCcHHHHHHcCccceecCC-CCHHHHHHHH
Q 015014 226 VG-AYLGMTGKRISTPSDALFAGLGTDYVPS-GNLGSLKEAL 265 (414)
Q Consensus 226 ~a-~~l~ltG~~i~~a~eA~~~GLv~~vv~~-~~l~~~~~~l 265 (414)
++ ++|++||++++ |+||+++|||++++|+ +++.+.+.++
T Consensus 155 ~a~~~llltG~~~~-a~eA~~~Glv~~vv~~~~~l~~~a~~~ 195 (239)
T PLN02267 155 AARRDVLLRAAKLT-AEEAVEMGIVDSAHDSAEETVEAAVRL 195 (239)
T ss_pred HHHHHHHHcCCcCC-HHHHHHCCCcceecCCHHHHHHHHHHH
Confidence 88 69999999999 9999999999999985 4665544443
No 87
>KOG0016 consensus Enoyl-CoA hydratase/isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=298.38 Aligned_cols=258 Identities=21% Similarity=0.278 Sum_probs=224.5
Q ss_pred CCCccEEEEEecCcEEEEEEc-CCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhC
Q 015014 63 GAEEFVKGNVHPNGVAVITLD-RPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKD 141 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itln-rp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~ 141 (414)
+.+..+.++. .|++.+|.+| ||++.|+|+.+|+.++..+++.+.+|+++..+|++|.| ++||+|.|++.+......+
T Consensus 4 ~~~~~~vv~~-~~g~~~I~~~~~Pkk~Nal~~e~y~~i~~al~~a~~dds~~~tv~s~~G-~~f~sG~Df~~~~~~~~~d 81 (266)
T KOG0016|consen 4 MRYREIVVTR-ENGPFFIALNIRPKKKNALNREDYVYIQRALEEANDDDSVSITVLSSNG-SYFCSGLDFSPFAKALDDD 81 (266)
T ss_pred ccccceEEEe-cCCcEEEEecCCCcccccccHHHHHHHHHHHHHhhcccceEEEEEecCc-cEEeeccccchhhhcCCCc
Confidence 3456677775 8999999999 99999999999999999999999999999999999997 9999999999988754332
Q ss_pred CCCCchHHH---HHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHh
Q 015014 142 RNTPLVPKV---FTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA 218 (414)
Q Consensus 142 ~~~~~~~~~---~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~ 218 (414)
.. ...... ...+.-+...+..+|||+||+|||+|+|-|+.+.-.||+++|+|+++|..|++++|..|++|+++.+|
T Consensus 82 ~~-~~~~~~~~~v~~~~~~v~~fi~f~Kplia~vNGPAIGlgasil~lcD~V~A~Dka~F~TPfa~lGq~PEG~Ss~t~p 160 (266)
T KOG0016|consen 82 AN-EESDKASKFVKNVSCFVNTFINFPKPLVALVNGPAIGLGASILPLCDYVWASDKAWFQTPFAKLGQSPEGCSSVTLP 160 (266)
T ss_pred cc-ccchhhHHHHHHHHHHHHHHhcCCCCEEEEecCCccchhhHHhhhhheEEeccceEEeccchhcCCCCCcceeeeeh
Confidence 22 112212 22222366788999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhh
Q 015014 219 KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLL 298 (414)
Q Consensus 219 r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 298 (414)
+++|.. .|.||++.|++++ |+||.+.|||++++|.+++.+.
T Consensus 161 ~imG~~-~A~E~ll~~~klt-A~Ea~~~glVskif~~~tf~~~------------------------------------- 201 (266)
T KOG0016|consen 161 KIMGSA-SANEMLLFGEKLT-AQEACEKGLVSKIFPAETFNEE------------------------------------- 201 (266)
T ss_pred Hhhchh-hHHHHHHhCCccc-HHHHHhcCchhhhcChHHHHHH-------------------------------------
Confidence 999997 9999999999999 9999999999999999776432
Q ss_pred HHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHH
Q 015014 299 LPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMK 378 (414)
Q Consensus 299 ~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~ 378 (414)
+.+.++++++.||.+++..|++++... ...+..+.+
T Consensus 202 -----------------------------------v~~~ikq~s~l~p~sl~~~K~L~rs~~---------k~~l~~an~ 237 (266)
T KOG0016|consen 202 -----------------------------------VLKKIKQYSKLSPESLLGMKKLLRSNI---------KEELIKANE 237 (266)
T ss_pred -----------------------------------HHHHHHHHhcCCHHHHHHHHHHHHHHH---------HHHHHHhhH
Confidence 223345688999999999999999877 567999999
Q ss_pred HHHHHHHHhCCCchHHHHHHhhHhCCCC
Q 015014 379 YEYRVALRSSLRSDFAEGVRAVLVDKDQ 406 (414)
Q Consensus 379 ~e~~~~~~~~~~~D~~eGv~afl~dk~~ 406 (414)
.|.......|.++|+.+.+.+|+.++++
T Consensus 238 ~E~~~l~~~W~s~e~~~~~~~~~~~~~k 265 (266)
T KOG0016|consen 238 EECNVLLKQWVSAECLARFKQYLSKKRK 265 (266)
T ss_pred HHHHHHHhhccChHHHHHHHHHhccccc
Confidence 9999999999999999999999976654
No 88
>cd06558 crotonase-like Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase. Many of these play important roles in fatty acid metabolism. In addition to a conserved structural core and the formation of trimers (or dimers of trimers), a common feature in this superfamily is the stabilization of an enolate anion intermediate derived from an acyl-CoA substrate. This is accomplished by two conserved backbone NH groups in active sites that form an oxyanion hole.
Probab=100.00 E-value=5.6e-39 Score=294.96 Aligned_cols=193 Identities=32% Similarity=0.435 Sum_probs=174.4
Q ss_pred EEEEecCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchH
Q 015014 69 KGNVHPNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVP 148 (414)
Q Consensus 69 ~~~~~~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~ 148 (414)
.++. +++|++|+||+|++.|++|.+|+++|.++++.++.|+++++|||+|.| +.||+|+|++++..... ..+...
T Consensus 2 ~~~~-~~~i~~i~l~~~~~~N~~~~~~~~~l~~~l~~~~~d~~~~~vvl~~~~-~~Fs~G~dl~~~~~~~~---~~~~~~ 76 (195)
T cd06558 2 LVER-DGGVATITLNRPEKRNALSLEMLDELAAALDEAEADPDVRVVVLTGAG-KAFCAGADLKELAALSD---AGEEAR 76 (195)
T ss_pred EEEE-ECCEEEEEECCccccCCCCHHHHHHHHHHHHHHHhCCCceEEEEECCC-CceEeCcCHHHHhcccc---cchhHH
Confidence 4554 689999999999999999999999999999999999999999999985 99999999999875321 111244
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHH
Q 015014 149 KVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 228 (414)
Q Consensus 149 ~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~ 228 (414)
.+....+.++..+..++||+||+|||+|+|+|++++++|||||++++++|++||+++|++|+.|++++|++++|.. .+.
T Consensus 77 ~~~~~~~~~~~~i~~~~~p~Ia~v~G~a~g~G~~la~~~D~~i~~~~~~~~~pe~~~G~~p~~g~~~~l~~~~g~~-~a~ 155 (195)
T cd06558 77 AFIRELQELLRALLRLPKPVIAAVNGAALGGGLELALACDIRIAAEDAKFGLPEVKLGLVPGGGGTQRLPRLVGPA-RAR 155 (195)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEECCeeecHHHHHHHhCCEEEecCCCEEechhhhcCCCCCCcHHHHHHHHhCHH-HHH
Confidence 5777778899999999999999999999999999999999999999999999999999999999999999999987 999
Q ss_pred HHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHh
Q 015014 229 YLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 268 (414)
Q Consensus 229 ~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 268 (414)
+++++|+.++ |+||+++||++++++.+++.+.+.++++.
T Consensus 156 ~~~l~g~~~~-a~ea~~~Glv~~~~~~~~l~~~a~~~a~~ 194 (195)
T cd06558 156 ELLLTGRRIS-AEEALELGLVDEVVPDEELLAAALELARR 194 (195)
T ss_pred HHHHcCCccC-HHHHHHcCCCCeecChhHHHHHHHHHHhh
Confidence 9999999999 99999999999999998888877776643
No 89
>TIGR03222 benzo_boxC benzoyl-CoA-dihydrodiol lyase. In the presence of O2, the benzoyl-CoA oxygenase/reductase BoxBA BoxAB converts benzoyl-CoA to 2,3-dihydro-2,3-dihydroxybenzoyl-CoA. Members of this family, BoxC, homologous to enoyl-CoA hydratases/isomerases, hydrolyze this compound to 3,4-dehydroadipyl-CoA semialdehyde + HCOOH.
Probab=100.00 E-value=1.4e-38 Score=330.94 Aligned_cols=201 Identities=15% Similarity=0.175 Sum_probs=170.0
Q ss_pred CCCccEEEEEecCcEEEEEEcCCC----------CCCCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCCccCCCCh
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRPK----------ALNAMNLDMDIKYKSFLDEWE-SDPRVKCVLIEGSGPRAFCAGMDI 131 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp~----------~~Nal~~~m~~eL~~~l~~~~-~d~~v~~vVl~g~g~~~FcaG~Dl 131 (414)
..++++.++. +++|++|+||||+ ++|+||.+|+.+|.++++.++ .|+++|+|||||.++++||+|+|+
T Consensus 8 ~~~~~v~~~~-~g~Va~ItLnrpe~~~~~p~~~~k~Nal~~~~l~eL~~al~~~~~~d~~vRvVVLtg~~Gk~FcaG~DL 86 (546)
T TIGR03222 8 SQYRHWKLTF-DGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDAVQRIRFEHPEVRTVVMTSGKDRVFCSGANI 86 (546)
T ss_pred CCCceEEEEe-eCCEEEEEEecccccccCccccccCCCCCHHHHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcCCcCH
Confidence 4577888886 7899999999976 899999999999999999999 789999999999755899999999
Q ss_pred hhHHHHhhhCCCCCchHHHHHHH-HHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC--eeEeccccc-CCC
Q 015014 132 KGVVAEIQKDRNTPLVPKVFTAE-YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENG-IGL 207 (414)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~-~Gl 207 (414)
+++.... .. .......+.... ..+...+.++||||||+|||+|+|||++|+++||+||++++ ++|++||++ +|+
T Consensus 87 ~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~i~~~pkPvIAAVnG~a~GGG~~LALacD~rvAs~~a~a~f~~pEv~~lGl 164 (546)
T TIGR03222 87 FMLGLST-HA-WKVNFCKFTNETRNGIEDSSRHSGLKFLAAVNGTCAGGGYELALACDEIMLVDDRSSSVSLPEVPLLGV 164 (546)
T ss_pred HHHhccc-cc-hhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhccCc
Confidence 9874311 00 000011111111 23445678899999999999999999999999999999996 799999997 999
Q ss_pred CCChhHHHHHh--hCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHh
Q 015014 208 FPDVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 268 (414)
Q Consensus 208 ~P~~g~~~~L~--r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 268 (414)
+|++|++++++ +.+|.. ++++|++||+.|+ |+||++||||+++||++++.+.+.+++.+
T Consensus 165 ~P~~gg~~~l~~~~~vg~~-~A~~llltG~~i~-A~eA~~~GLV~~vv~~~~l~~~a~~lA~~ 225 (546)
T TIGR03222 165 LPGTGGLTRVTDKRRVRRD-HADIFCTIEEGVR-GKRAKEWRLVDEVVKPSQFDAAIAERAAE 225 (546)
T ss_pred CCccchhhhccccchhCHH-HHHHHHHcCCCcc-HHHHHHcCCceEEeChHHHHHHHHHHHHH
Confidence 99999999997 789997 9999999999999 99999999999999999998888887766
No 90
>KOG1682 consensus Enoyl-CoA isomerase [Lipid transport and metabolism]
Probab=100.00 E-value=3.5e-38 Score=279.88 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=217.5
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHH
Q 015014 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTA 153 (414)
Q Consensus 74 ~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (414)
.++|-.|+||+|+++|.|+.+|+.+|.+.+....++.++|+|||+..| +.||+|.||+++.... ..+.....|..
T Consensus 39 ~~gvR~i~l~npKk~NtLSLaM~~~Lq~~ll~d~d~~dlr~viita~G-kifSaGH~LKELt~e~----g~d~haevFqt 113 (287)
T KOG1682|consen 39 HNGVREITLNNPKKLNTLSLAMMCALQDALLKDKDNLDLRCVIITAQG-KIFSAGHNLKELTNEP----GSDIHAEVFQT 113 (287)
T ss_pred ccceeeeeecCccccchhhHHHHHHHHHHHhhcccccceeEEEEecCC-ccccccccHHHhhcCc----cchHHHHHHHH
Confidence 589999999999999999999999999999998888999999999998 8999999999987632 23444567777
Q ss_pred HHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhc
Q 015014 154 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMT 233 (414)
Q Consensus 154 ~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~lt 233 (414)
.-+++.-|+++|+||||-|||+|..+||.|...||++||+++++|..|...+|++...-|. -|.|.+.+. .++||++|
T Consensus 114 c~dvmn~Irn~pVPVia~VNG~AaAAGcQLVaSCD~vVa~k~SkF~tPG~~vGlFCSTPGv-AlaRavpRk-va~~ML~T 191 (287)
T KOG1682|consen 114 CTDVMNDIRNLPVPVIAKVNGYAAAAGCQLVASCDMVVATKNSKFSTPGAGVGLFCSTPGV-ALARAVPRK-VAAYMLMT 191 (287)
T ss_pred HHHHHHHHhcCCCceEEEecchhhhccceEEEeeeEEEEecCccccCCCCceeeEecCcch-hHhhhcchh-HHHHHHHh
Confidence 7889999999999999999999999999999999999999999999999999997433222 378888887 99999999
Q ss_pred CCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHhhcCCCcHHHHHHHHHhhcCCCCCcchhhhhHHHHHhhcCCcccHH
Q 015014 234 GKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAVTFSEDPHQDIVALLAKYSSDPEGEAPLKLLLPQITSCFSSEKSVR 313 (414)
Q Consensus 234 G~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~F~~~~sv~ 313 (414)
|.+|+ ++||+..|||+++||.++++..+++++.
T Consensus 192 g~Pi~-~eeAl~sGlvskvVp~~el~~e~~~i~~---------------------------------------------- 224 (287)
T KOG1682|consen 192 GLPIT-GEEALISGLVSKVVPAEELDKEIEEITN---------------------------------------------- 224 (287)
T ss_pred CCCCc-hHHHHHhhhhhhcCCHHHHHHHHHHHHH----------------------------------------------
Confidence 99999 9999999999999999998766555543
Q ss_pred HHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCCCchH
Q 015014 314 QIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDF 393 (414)
Q Consensus 314 ~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~D~ 393 (414)
+|...|..-+.+.|+.+.... ..+-.+++....+.+...+.-.|.
T Consensus 225 --------------------------~i~~~srav~slgk~f~y~q~---------~ms~~ea~~~~~~~m~~n~ql~d~ 269 (287)
T KOG1682|consen 225 --------------------------AIKAKSRAVISLGKEFYYKQL---------AMSQAEAFSAAQEKMCENFQLGDT 269 (287)
T ss_pred --------------------------HHhhhHHHHHHHHHHHHHHHH---------HHhHHHHHHHHHHHHhhcccccch
Confidence 378888888899999998876 567889999999999999999999
Q ss_pred HHHHHhhHhCCCCCCCCCcC
Q 015014 394 AEGVRAVLVDKDQVLSQLKL 413 (414)
Q Consensus 394 ~eGv~afl~dk~~~P~~~~~ 413 (414)
+|||.+|+ .++|..||-
T Consensus 270 kegiasf~---~krp~~~~h 286 (287)
T KOG1682|consen 270 KEGIASFF---EKRPPNWKH 286 (287)
T ss_pred HHHHHHHh---ccCCCCcCC
Confidence 99999999 455666663
No 91
>PRK08184 benzoyl-CoA-dihydrodiol lyase; Provisional
Probab=100.00 E-value=9.4e-38 Score=325.69 Aligned_cols=201 Identities=16% Similarity=0.194 Sum_probs=169.3
Q ss_pred CCCccEEEEEecCcEEEEEEcCC-------C---CCCCCCHHHHHHHHHHHHHHh-cCCCceEEEEEeCCCCCccCCCCh
Q 015014 63 GAEEFVKGNVHPNGVAVITLDRP-------K---ALNAMNLDMDIKYKSFLDEWE-SDPRVKCVLIEGSGPRAFCAGMDI 131 (414)
Q Consensus 63 ~~~~~v~~~~~~~~V~~Itlnrp-------~---~~Nal~~~m~~eL~~~l~~~~-~d~~v~~vVl~g~g~~~FcaG~Dl 131 (414)
++++.+.++. +++|++|+|||| + ++|+||.+|+.+|.++++.++ +|+++|+|||+|.++++||+|+|+
T Consensus 12 ~~~~~~~~e~-~~~Va~ItLnrpe~~~~rP~~~~~~Nal~~~m~~eL~~al~~~~~~d~~vrvVVLtg~ggk~FcaG~DL 90 (550)
T PRK08184 12 SQYRHWKLSF-DGPVATLTMDVDEDGGLRPGYKLKLNSYDLGVDIELHDALQRIRFEHPEVRTVVVTSAKDRVFCSGANI 90 (550)
T ss_pred CCCceEEEEe-eCCEEEEEEcCccccccCcccccCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEEecCCCCCCCCccCH
Confidence 5678899987 699999999965 4 899999999999999999999 789999999999866899999999
Q ss_pred hhHHHHhhhCCCCCchHHHHHHHH-HHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC--eeEeccccc-CCC
Q 015014 132 KGVVAEIQKDRNTPLVPKVFTAEY-SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK--TLLAMPENG-IGL 207 (414)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~--a~f~~pe~~-~Gl 207 (414)
+++..... ........+....+ .+...+.++||||||+|||+|+|||++|+++|||||++++ ++|++||++ +|+
T Consensus 91 ~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~pkPvIAAVnG~a~GGG~~LALacD~rIas~~~~a~fg~pEv~~~Gl 168 (550)
T PRK08184 91 FMLGGSSH--AWKVNFCKFTNETRNGIEDSSRHSGLKFIAAVNGTCAGGGYELALACDEIVLVDDRSSAVSLPEVPLLGV 168 (550)
T ss_pred HhHhcccc--chhhhHHHHHHHHHHHHHHHHHhCCCCEEEEECCEeehHHHHHHHhCCEEEEecCCCcEEEccchhcccc
Confidence 98743110 00000011111111 2345678899999999999999999999999999999987 899999997 999
Q ss_pred CCChhHHHHHh--hCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHHHHHHHh
Q 015014 208 FPDVGFSYIAA--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLKEALLAV 268 (414)
Q Consensus 208 ~P~~g~~~~L~--r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~~~ 268 (414)
+|++|++++|+ +.+|.. ++++|++||+.++ |+||+++|||+++||++++.+.+.+++.+
T Consensus 169 ~P~~gg~~rl~~~~~vg~~-~A~~llltG~~i~-AeeA~~~GLVd~vv~~d~l~~~a~~~A~~ 229 (550)
T PRK08184 169 LPGTGGLTRVTDKRKVRRD-LADIFCTIEEGVR-GKRAVDWRLVDEVVKPSKFDAKVAERAAE 229 (550)
T ss_pred CCCcchHHHhhhhhhcCHH-HHHHHHHhCCccc-HHHHHHcCCccEeeCHHHHHHHHHHHHHH
Confidence 99999999998 789997 9999999999999 99999999999999999998887777665
No 92
>cd07014 S49_SppA Signal peptide peptidase A. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is an intramembrane enzyme found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be ClpP-like serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain, cleaving peptide bonds in the plane of the lipid bilayer. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal p
Probab=99.79 E-value=3.5e-19 Score=161.59 Aligned_cols=141 Identities=15% Similarity=0.022 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECC
Q 015014 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDG 174 (414)
Q Consensus 95 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG 174 (414)
...+|.++++.+++|+++++|||++ +|.|+|+.... ...+++..+.+++|||||+|||
T Consensus 23 ~~~~l~~~l~~a~~d~~v~~vvl~~-----~~~gg~~~~~~-----------------~~~~~i~~~~~~~kpVia~v~G 80 (177)
T cd07014 23 SGDTTAAQIRDARLDPKVKAIVLRV-----NSPGGSVTASE-----------------VIRAELAAARAAGKPVVASGGG 80 (177)
T ss_pred CHHHHHHHHHHHhcCCCceEEEEEe-----eCCCcCHHHHH-----------------HHHHHHHHHHhCCCCEEEEECC
Confidence 5789999999999999999999986 68898876431 1223556777899999999999
Q ss_pred ccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHH--------HHhhCCC--cHHHHHHHHhcCCCCCcHHHHH
Q 015014 175 VTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY--------IAAKGPG--GGSVGAYLGMTGKRISTPSDAL 244 (414)
Q Consensus 175 ~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~--------~L~r~~G--~~~~a~~l~ltG~~i~~a~eA~ 244 (414)
.|.|||+.|+++||++++++++.|+.+.+..+..+...... .+++..| .. ..++++..|..++ |++|+
T Consensus 81 ~a~g~g~~la~a~D~i~a~~~a~~~~~G~~~~~~~~~~~l~~~~~~~~~~v~~~rg~~~~-~~~~~l~~g~~~~-a~~A~ 158 (177)
T cd07014 81 NAASGGYWISTPANYIVANPSTLVGSIGIFGVQLADQLSIENGYKRFITLVADNRHSTPE-QQIDKIAQGGVWT-GQDAK 158 (177)
T ss_pred chhHHHHHHHHhCCEEEECCCCeEEEechHhhHHHHHHHHHHHHHHHHHHHHHhCCCCHH-HhHHHhcCcCeEe-HHHHH
Confidence 99999999999999999999999999987766433222222 4445555 54 6788999999999 99999
Q ss_pred HcCccceecCCCCHH
Q 015014 245 FAGLGTDYVPSGNLG 259 (414)
Q Consensus 245 ~~GLv~~vv~~~~l~ 259 (414)
+.||||++.+.+++.
T Consensus 159 ~~GLVD~v~~~~e~~ 173 (177)
T cd07014 159 ANGLVDSLGSFDDAV 173 (177)
T ss_pred HcCCcccCCCHHHHH
Confidence 999999999876654
No 93
>PF13766 ECH_C: 2-enoyl-CoA Hydratase C-terminal region; PDB: 3JU1_A 3BPT_A.
Probab=99.79 E-value=4.5e-19 Score=149.93 Aligned_cols=99 Identities=38% Similarity=0.605 Sum_probs=84.3
Q ss_pred hhhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHH
Q 015014 295 LKLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLS 374 (414)
Q Consensus 295 ~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~ 374 (414)
+......|++||+.+ |+++|+++|+... .+|+.++++.|.++||+|+++|.++++++. ..+++
T Consensus 2 L~~~~~~I~~~F~~~-s~~eI~~~L~~~~-------~~~a~~~~~~l~~~SP~Sl~vt~~~l~~~~---------~~sl~ 64 (118)
T PF13766_consen 2 LAEHLEAIDRCFSAD-SVEEIIEALEADG-------DEWAQKTLETLRSGSPLSLKVTFEQLRRGR---------NLSLA 64 (118)
T ss_dssp CHHCHHHHHHHTTSS-SHHHHHHHHHHHS--------HHHHHHHHHHCCS-HHHHHHHHHHHHCCT---------TS-HH
T ss_pred hHHHHHHHHHHhCCC-CHHHHHHHHHccC-------cHHHHHHHHHHHHCCHHHHHHHHHHHHHhh---------hCCHH
Confidence 456788999999987 9999999999965 699999999999999999999999999987 68999
Q ss_pred HHHHHHHHHHHHhCCCchHHHHHHhhHhCCCCCCCC
Q 015014 375 GVMKYEYRVALRSSLRSDFAEGVRAVLVDKDQVLSQ 410 (414)
Q Consensus 375 ~~l~~e~~~~~~~~~~~D~~eGv~afl~dk~~~P~~ 410 (414)
+++++|+++..+++..+||.|||||.||||++.|+|
T Consensus 65 e~l~~E~~~a~~~~~~~DF~EGVRA~LIDKd~~P~W 100 (118)
T PF13766_consen 65 ECLRMEYRLASRCMRHPDFAEGVRALLIDKDKNPKW 100 (118)
T ss_dssp HHHHHHHHHHHHHHCCSCHHHHHHHHTTS-------
T ss_pred HHHHHHHHHHHHHhccchHHHHHHHHHhcCCCCCCC
Confidence 999999999999999999999999999999999976
No 94
>cd07020 Clp_protease_NfeD_1 Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially c
Probab=99.78 E-value=1.3e-18 Score=159.19 Aligned_cols=145 Identities=12% Similarity=0.014 Sum_probs=115.6
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEE-eCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 78 AVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIE-GSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 78 ~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~-g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
++|.++ ..++..+...+.+.++.+++++ ++.|+|. .+ -|+++..-. .
T Consensus 2 ~vv~i~-----g~I~~~~~~~l~~~l~~a~~~~-~~~vvl~InS------pGG~v~~~~--------------------~ 49 (187)
T cd07020 2 YVLEIN-----GAITPATADYLERAIDQAEEGG-ADALIIELDT------PGGLLDSTR--------------------E 49 (187)
T ss_pred EEEEEe-----eEEChHHHHHHHHHHHHHHhCC-CCEEEEEEEC------CCCCHHHHH--------------------H
Confidence 456665 3466777888999999998765 7888876 33 234443211 2
Q ss_pred HHHHHhhCCCcEEEEEC---CccccchhhhhccCCeEEEcCCeeEecccccCCCCCCh--------------hHHHHHhh
Q 015014 157 LICKISEYKKPYISLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDV--------------GFSYIAAK 219 (414)
Q Consensus 157 l~~~l~~~~kPvIAavn---G~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~--------------g~~~~L~r 219 (414)
++..|..+||||||+|+ |+|.|||+.|+++||++|++++++|+++++..|..+.. +....+++
T Consensus 50 i~~~l~~~~kPvia~v~~~~G~AasgG~~iala~D~iva~p~a~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 129 (187)
T cd07020 50 IVQAILASPVPVVVYVYPSGARAASAGTYILLAAHIAAMAPGTNIGAAHPVAIGGGGGSDPVMEKKILNDAVAYIRSLAE 129 (187)
T ss_pred HHHHHHhCCCCEEEEEecCCCCchhHHHHHHHhCCceeECCCCcEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 34467789999999999 99999999999999999999999999999985554432 34557888
Q ss_pred CCCc--HHHHHHHHhcCCCCCcHHHHHHcCccceecCCC
Q 015014 220 GPGG--GSVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 256 (414)
Q Consensus 220 ~~G~--~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~ 256 (414)
..|. . .+.+++++|+.++ |+||+++||||++++++
T Consensus 130 ~~G~~~~-~a~~~l~~g~~~~-a~eA~~~Glvd~v~~~~ 166 (187)
T cd07020 130 LRGRNAE-WAEKAVRESLSLT-AEEALKLGVIDLIAADL 166 (187)
T ss_pred HcCCCHH-HHHHHHHcCCeec-HHHHHHcCCcccccCCH
Confidence 8887 5 7899999999999 99999999999999875
No 95
>cd07019 S49_SppA_1 Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppAs in this subfamily are found in all three domains of life and are involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Site-directed mutagenesis and sequence analysis have shown these bacterial, archaeal and thylakoid SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad (both residues absolutely conserved within bacteria, chloroplast and mitochondrial signal peptidase family members) and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases. In addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members, the E. coli SppA contains an amino-te
Probab=99.63 E-value=1.1e-15 Score=142.46 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=80.2
Q ss_pred EEEEEEcCC--CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHH
Q 015014 77 VAVITLDRP--KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAE 154 (414)
Q Consensus 77 V~~Itlnrp--~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 154 (414)
|++|.++-| +..+.-+..++.+|.++|+.+..||++++|||+ .||+|+|+..+.. .
T Consensus 2 i~v~~~~g~i~~~~~~~~~~~~~~l~~~l~~a~~d~~v~~ivL~-----~~s~Gg~~~~~~~-----------------~ 59 (211)
T cd07019 2 IGVVFANGAIVDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLR-----VNSPGGSVTASEV-----------------I 59 (211)
T ss_pred EEEEEEEEEEeCCCCCCCccCHHHHHHHHHHHhhCCCceEEEEE-----EcCCCcCHHHHHH-----------------H
Confidence 445555433 112333445689999999999999999999996 6999999976532 1
Q ss_pred HHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEe
Q 015014 155 YSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLA 199 (414)
Q Consensus 155 ~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~ 199 (414)
++.+..+..++|||||+++|.|.|+|+.|+++||++++++++.|+
T Consensus 60 ~~~l~~~~~~~kpVia~v~g~a~s~gy~la~~aD~i~a~~~a~~g 104 (211)
T cd07019 60 RAELAAARAAGKPVVVSAGGAAASGGYWISTPANYIVANPSTLTG 104 (211)
T ss_pred HHHHHHHHhCCCCEEEEECCeehhHHHHHHHhCCEEEEcCCCEEE
Confidence 234556788999999999999999999999999999999998876
No 96
>cd07022 S49_Sppa_36K_type Signal peptide peptidase A (SppA) 36K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 36K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily are all bacterial and include sohB peptidase and protein C. These are sometimes referred to as 36K type since they contain only one domain, unlike E. coli SppA that also contains an amino-terminal domain. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad and not the usual Ser-His-Asp catalytic triad found in the majority of serine proteases.
Probab=99.50 E-value=2.2e-13 Score=127.33 Aligned_cols=96 Identities=18% Similarity=0.192 Sum_probs=74.3
Q ss_pred cCCCCCCC-CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHH
Q 015014 83 DRPKALNA-MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKI 161 (414)
Q Consensus 83 nrp~~~Na-l~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 161 (414)
++|...|+ ++..++.+|.++|+.+++|+++++|||+. +|.|+++.... ...+.+..+
T Consensus 13 ~~~~~~~~~~~~~~~~~l~~~l~~a~~d~~i~~Vvl~~-----~s~gg~~~~~~-----------------~l~~~l~~~ 70 (214)
T cd07022 13 PRGSWLEASSGLTSYEGIAAAIRAALADPDVRAIVLDI-----DSPGGEVAGVF-----------------ELADAIRAA 70 (214)
T ss_pred CCCCcccCCCCcccHHHHHHHHHHHhhCCCCcEEEEEE-----eCCCCcHHHHH-----------------HHHHHHHHH
Confidence 45655565 45689999999999999999999999975 45566654321 112223334
Q ss_pred hhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecc
Q 015014 162 SEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMP 201 (414)
Q Consensus 162 ~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~p 201 (414)
.. +|||||+++|.|.|||+.|+++||++++++++.|+..
T Consensus 71 ~~-~KpViA~v~g~a~s~gy~lA~~aD~i~a~~~a~~g~i 109 (214)
T cd07022 71 RA-GKPIVAFVNGLAASAAYWIASAADRIVVTPTAGVGSI 109 (214)
T ss_pred hc-CCCEEEEECCchhhHHHHHHhcCCEEEEcCCCeEEee
Confidence 44 6999999999999999999999999999999987654
No 97
>cd00394 Clp_protease_like Caseinolytic protease (ClpP) is an ATP-dependent protease. Clp protease (caseinolytic protease; ClpP; endopeptidase Clp; Peptidase S14; ATP-dependent protease, ClpAP)-like enzymes are highly conserved serine proteases and belong to the ClpP/Crotonase superfamily. Included in this family are Clp proteases that are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. The functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activity in the presence of ATP. Active site consists of the triad Ser, His and Asp, preferring hydrophobic or non-polar residues at P1 or P1' positions. The protease exists as a tetradec
Probab=99.50 E-value=1.9e-13 Score=121.90 Aligned_cols=135 Identities=14% Similarity=0.050 Sum_probs=103.1
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEE
Q 015014 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIS 170 (414)
Q Consensus 91 l~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 170 (414)
++..+..+|.+.|+.++.|+.+++|||.. .|.|+|+.... .+...|..++||||+
T Consensus 8 I~~~~~~~l~~~l~~a~~d~~~~~ivl~~-----~s~Gg~~~~~~--------------------~i~~~l~~~~kpvva 62 (161)
T cd00394 8 IEDVSADQLAAQIRFAEADNSVKAIVLEV-----NTPGGRVDAGM--------------------NIVDALQASRKPVIA 62 (161)
T ss_pred EccchHHHHHHHHHHHHhCCCCceEEEEE-----ECCCcCHHHHH--------------------HHHHHHHHhCCCEEE
Confidence 45688999999999999999999999975 46677765322 233467778899999
Q ss_pred EECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHH------H-------HHh------hCCCcHHHHHHHH
Q 015014 171 LMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS------Y-------IAA------KGPGGGSVGAYLG 231 (414)
Q Consensus 171 avnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~------~-------~L~------r~~G~~~~a~~l~ 231 (414)
.++|.|.++|+.|+++||.|++.+++.|++..+..+.....+-. . .+. |.+... ...+++
T Consensus 63 ~~~g~~~s~g~~la~~~d~~~~~~~a~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~r~~~~~-~~~~~~ 141 (161)
T cd00394 63 YVGGQAASAGYYIATAANKIVMAPGTRVGSHGPIGGYGGNGNPTAQEADQRIILYFIARFISLVAENRGQTTE-KLEEDI 141 (161)
T ss_pred EECChhHHHHHHHHhCCCEEEECCCCEEEEeeeEEecCCCCChHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH-HHHHHh
Confidence 99999999999999999999999999999988876654322000 0 111 112222 356778
Q ss_pred hcCCCCCcHHHHHHcCcccee
Q 015014 232 MTGKRISTPSDALFAGLGTDY 252 (414)
Q Consensus 232 ltG~~i~~a~eA~~~GLv~~v 252 (414)
.+|..++ |+||++.||||++
T Consensus 142 ~~~~~~~-a~eA~~~GLvD~i 161 (161)
T cd00394 142 EKDLVLT-AQEALEYGLVDAL 161 (161)
T ss_pred cCCcEEc-HHHHHHcCCcCcC
Confidence 8899999 9999999999975
No 98
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=99.47 E-value=1.8e-13 Score=145.14 Aligned_cols=155 Identities=18% Similarity=0.200 Sum_probs=117.0
Q ss_pred cCcEEEEEEcCCC--CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCC--CCccCCCChhhHHHHhhhCCCCCchHH
Q 015014 74 PNGVAVITLDRPK--ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGP--RAFCAGMDIKGVVAEIQKDRNTPLVPK 149 (414)
Q Consensus 74 ~~~V~~Itlnrp~--~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~--~~FcaG~Dl~~~~~~~~~~~~~~~~~~ 149 (414)
++.|++|+++.+= ..|..+....+.+.+.++.+..|++|++|||+-..| .+||+ .
T Consensus 307 ~~~vavI~~~G~I~~~~~~~~~~~~~~~~~~l~~a~~D~~VkaIVLrinSpGGs~~as----e----------------- 365 (584)
T TIGR00705 307 QDKIGIVHLEGPIADGRDTEGNTGGDTVAALLRVARSDPDIKAVVLRINSPGGSVFAS----E----------------- 365 (584)
T ss_pred CCeEEEEEEEEEEcCCCCcccccCHHHHHHHHHHHhhCCCceEEEEEecCCCCCHHHH----H-----------------
Confidence 6789999999763 234444445667888899999999999999995432 23332 1
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeE------eccc------ccCCCCCChhHHHHH
Q 015014 150 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLL------AMPE------NGIGLFPDVGFSYIA 217 (414)
Q Consensus 150 ~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f------~~pe------~~~Gl~P~~g~~~~L 217 (414)
..++.+..+...+||||+.++|.|.+||+.++++||.++|++.+.+ +++. .++|+.|+...+..+
T Consensus 366 ---~i~~~i~~~~~~gKPVva~~~g~aaSggY~iA~aaD~I~a~p~t~~GSIGv~~~~~~~~~~l~klGi~~~~~~t~~~ 442 (584)
T TIGR00705 366 ---IIRRELARAQARGKPVIVSMGAMAASGGYWIASAADYIVASPNTITGSIGVFSVLPTFENSLDRIGVHVDGVSTHEL 442 (584)
T ss_pred ---HHHHHHHHHHhCCCcEEEEECCccccHHHHHHHhCCEEEECCCCeeecCEEEEEccCHHHHHHhcCCceEEEeccCc
Confidence 1122334566778999999999999999999999999999999876 6553 589998877666544
Q ss_pred hh----------------------------CCCcHHH-----HHHHHhcCCCCCcHHHHHHcCccceecC
Q 015014 218 AK----------------------------GPGGGSV-----GAYLGMTGKRISTPSDALFAGLGTDYVP 254 (414)
Q Consensus 218 ~r----------------------------~~G~~~~-----a~~l~ltG~~i~~a~eA~~~GLv~~vv~ 254 (414)
.. .++.+ + ..+.+.+|+.++ |+||+++||||++..
T Consensus 443 ~~~s~~~~~t~~~~~~~~~~l~~~y~~F~~~Va~~-R~l~~e~v~~ia~Grv~t-g~eA~~~GLVD~ig~ 510 (584)
T TIGR00705 443 ANVSLLRPLTAEDQAIMQLSVEAGYRRFLSVVSAG-RNLTPTQVDKVAQGRVWT-GEDAVSNGLVDALGG 510 (584)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh-CCCCHHHHHHHHhCCCcC-HHHHHHcCCcccCCC
Confidence 32 34333 4 678889999999 999999999999943
No 99
>cd07016 S14_ClpP_1 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. This subfamily only contains bacterial sequences. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which a
Probab=99.44 E-value=9.5e-13 Score=117.40 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEEC
Q 015014 94 DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMD 173 (414)
Q Consensus 94 ~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavn 173 (414)
.+...+.+.|+.++.++.+ .+.|.+.| +++.. ...+...|..++||||+.++
T Consensus 15 ~~~~~~~~~l~~~~~~~~i-~l~inspG-------G~~~~--------------------~~~i~~~i~~~~~pvi~~v~ 66 (160)
T cd07016 15 VTAKEFKDALDALGDDSDI-TVRINSPG-------GDVFA--------------------GLAIYNALKRHKGKVTVKID 66 (160)
T ss_pred cCHHHHHHHHHhccCCCCE-EEEEECCC-------CCHHH--------------------HHHHHHHHHhcCCCEEEEEc
Confidence 4677888888888877433 34445555 22211 12345567889999999999
Q ss_pred CccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhH---------------HHHHhhCCCcH-HHHHHHHhcCCCC
Q 015014 174 GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGF---------------SYIAAKGPGGG-SVGAYLGMTGKRI 237 (414)
Q Consensus 174 G~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~---------------~~~L~r~~G~~-~~a~~l~ltG~~i 237 (414)
|.|.|+|+.|+++||+|+++++++|+++....|..+.... ...+.+..|.. ....+++.++..+
T Consensus 67 g~a~s~g~~ia~a~d~~~~~~~a~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~l 146 (160)
T cd07016 67 GLAASAASVIAMAGDEVEMPPNAMLMIHNPSTGAAGNADDLRKAADLLDKIDESIANAYAEKTGLSEEEISALMDAETWL 146 (160)
T ss_pred chHHhHHHHHHhcCCeEEECCCcEEEEECCccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhCCeEC
Confidence 9999999999999999999999999998877665544322 23366777742 2667777777789
Q ss_pred CcHHHHHHcCcccee
Q 015014 238 STPSDALFAGLGTDY 252 (414)
Q Consensus 238 ~~a~eA~~~GLv~~v 252 (414)
+ |+||+++||||+|
T Consensus 147 ~-a~eA~~~GliD~v 160 (160)
T cd07016 147 T-AQEAVELGFADEI 160 (160)
T ss_pred c-HHHHHHcCCCCcC
Confidence 8 9999999999975
No 100
>cd07023 S49_Sppa_N_C Signal peptide peptidase A (SppA), a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV): SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. This subfamily contains members with either a single domain (sometimes referred to as 36K type), such as sohB peptidase, protein C and archaeal signal peptide peptidase, or an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Site-directed mutagenesis and sequence analysis have shown these SppAs to be serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys dyad
Probab=99.40 E-value=2.8e-12 Score=119.31 Aligned_cols=86 Identities=19% Similarity=0.124 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEE
Q 015014 93 LDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLM 172 (414)
Q Consensus 93 ~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav 172 (414)
..++.+|.++|+.++.|+++++|||++ +|.|+|+.... ..++.+..+..++|||||++
T Consensus 16 ~~~~~~l~~~l~~a~~d~~i~~ivl~~-----~s~Gg~~~~~~-----------------~i~~~i~~~~~~~kpvia~v 73 (208)
T cd07023 16 GIGADSLIEQLRKAREDDSVKAVVLRI-----NSPGGSVVASE-----------------EIYREIRRLRKAKKPVVASM 73 (208)
T ss_pred CCCHHHHHHHHHHHHhCCCCcEEEEEE-----ECCCCCHHHHH-----------------HHHHHHHHHHhcCCcEEEEE
Confidence 678999999999999999999999987 47788886521 12334557788899999999
Q ss_pred CCccccchhhhhccCCeEEEcCCeeEec
Q 015014 173 DGVTMGFGIGISGHGRYRIVTEKTLLAM 200 (414)
Q Consensus 173 nG~a~GgG~~Lala~D~ria~~~a~f~~ 200 (414)
+|.|.|+|+.|+++||++++++.+.|+.
T Consensus 74 ~g~~~s~g~~lA~aaD~i~a~~~s~~g~ 101 (208)
T cd07023 74 GDVAASGGYYIAAAADKIVANPTTITGS 101 (208)
T ss_pred CCcchhHHHHHHhhCCEEEECCCCeEEe
Confidence 9999999999999999999999998853
No 101
>TIGR00706 SppA_dom signal peptide peptidase SppA, 36K type. The member of this family from Bacillus subtilis was shown to have properties consistent with a role in degrading signal peptides after cleavage from precursor proteins, although it was not demonstrated conclusively.
Probab=99.34 E-value=1.5e-11 Score=114.32 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCC--CcEEEEEC
Q 015014 96 DIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYK--KPYISLMD 173 (414)
Q Consensus 96 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--kPvIAavn 173 (414)
..+|.++|+.+.+|+++++|||++. |.|+|+.... .+...|..++ |||||+++
T Consensus 15 ~~~l~~~l~~a~~d~~i~~vvl~~~-----s~Gg~~~~~~--------------------~l~~~i~~~~~~kpvia~v~ 69 (207)
T TIGR00706 15 PEDFDKKIKRIKDDKSIKALLLRIN-----SPGGTVVASE--------------------EIYEKLKKLKAKKPVVASMG 69 (207)
T ss_pred HHHHHHHHHHHhhCCCccEEEEEec-----CCCCCHHHHH--------------------HHHHHHHHhcCCCCEEEEEC
Confidence 5788999999999999999999863 6777775432 2233455565 99999999
Q ss_pred CccccchhhhhccCCeEEEcCCeeEecccc------------cCCCCCC------------------hhHHH--------
Q 015014 174 GVTMGFGIGISGHGRYRIVTEKTLLAMPEN------------GIGLFPD------------------VGFSY-------- 215 (414)
Q Consensus 174 G~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~Gl~P~------------------~g~~~-------- 215 (414)
|.|.|+|+.|+++||.+++++++.|+..-+ ++|+-+. .-.-.
T Consensus 70 g~a~s~g~~la~aaD~i~a~p~a~vg~iGv~~~~~~~~~~l~k~Gv~~~~~~~g~~K~~~~~~~~~s~~~~e~~~~~l~~ 149 (207)
T TIGR00706 70 GVAASGGYYIAMAADEIVANPGTITGSIGVILQGANVEKLYEKLGIEFEVIKSGEYKDIGSPTRELTPEERDILQNLVNE 149 (207)
T ss_pred CccchHHHHHHhcCCEEEECCCCeEEeeeEEEecCCHHHHHHhCCceEEEEEcCCCcCCCCCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999999999987765332 2333110 00000
Q ss_pred ----HH---h--hCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHH
Q 015014 216 ----IA---A--KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 260 (414)
Q Consensus 216 ----~L---~--r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~ 260 (414)
++ . |-+... . .+=++.|+.++ +++|++.||||++...+++.+
T Consensus 150 ~~~~f~~~va~~R~~~~~-~-~~~~~~~~~~~-~~~A~~~gLvD~i~~~~~~~~ 200 (207)
T TIGR00706 150 SYEQFVQVVAKGRNLPVE-D-VKKFADGRVFT-GRQALKLRLVDKLGTEDDALK 200 (207)
T ss_pred HHHHHHHHHHhcCCCCHH-H-HHHHhcCCccc-HHHHHHcCCCcccCCHHHHHH
Confidence 11 1 222221 1 22347889999 999999999999986655543
No 102
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=99.19 E-value=2.2e-10 Score=103.89 Aligned_cols=135 Identities=16% Similarity=0.157 Sum_probs=95.6
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEE
Q 015014 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYI 169 (414)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvI 169 (414)
.+++.+...+.+.|+.+++++ +..|||.=.. .|+++... ..+...|..+++|||
T Consensus 9 ~I~~~~~~~l~~~l~~a~~~~-~~~ivl~ins-----pGG~v~~~--------------------~~I~~~l~~~~~pvv 62 (178)
T cd07021 9 EIDPGLAAFVERALKEAKEEG-ADAVVLDIDT-----PGGRVDSA--------------------LEIVDLILNSPIPTI 62 (178)
T ss_pred EECHHHHHHHHHHHHHHHhCC-CCeEEEEEEC-----cCCCHHHH--------------------HHHHHHHHhCCCCEE
Confidence 466778888999999999886 6777775322 23444322 234557888999999
Q ss_pred EEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhH--------HHH------HhhCCCcHH-HHHHHHhcC
Q 015014 170 SLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGF--------SYI------AAKGPGGGS-VGAYLGMTG 234 (414)
Q Consensus 170 AavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~--------~~~------L~r~~G~~~-~a~~l~ltG 234 (414)
+.|+|.|.|+|+.++++||++++++++.|+.+++-.+ .|+ +.. +.+.-|+.. .+..|+--.
T Consensus 63 a~V~g~AaSaG~~ia~a~d~i~m~p~a~iG~~~~v~~----~~~~~~~~K~~~~~~~~~~~~A~~~gr~~~~a~~mv~~~ 138 (178)
T cd07021 63 AYVNDRAASAGALIALAADEIYMAPGATIGAAEPIPG----DGNGAADEKVQSYWRAKMRAAAEKKGRDPDIAEAMVDKD 138 (178)
T ss_pred EEECCchHHHHHHHHHhCCeEEECCCCeEecCeeEcC----CCccchhHHHHHHHHHHHHHHHHHhCCCHHHHHHHhhhh
Confidence 9999999999999999999999999999998855422 222 111 222334321 344444433
Q ss_pred -------------CCCCcHHHHHHcCccceecCC
Q 015014 235 -------------KRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 235 -------------~~i~~a~eA~~~GLv~~vv~~ 255 (414)
-.++ ++||++.|++|.++++
T Consensus 139 ~~v~~~~~~~~~~l~lt-a~eA~~~g~~d~ia~~ 171 (178)
T cd07021 139 IEVPGVGIKGGELLTLT-ADEALKVGYAEGIAGS 171 (178)
T ss_pred cccccccccccceeeeC-HHHHHHhCCeEEEECC
Confidence 2699 9999999999999864
No 103
>cd07018 S49_SppA_67K_type Signal peptide peptidase A (SppA) 67K type, a serine protease, has catalytic Ser-Lys dyad. Signal peptide peptidase A (SppA; Peptidase S49; Protease IV) 67K type: SppA is found in all three domains of life and is involved in the cleavage of signal peptides after their removal from the precursor proteins by signal peptidases. Members in this subfamily contain an amino-terminal domain in addition to the carboxyl-terminal protease domain that is conserved in all the S49 family members (sometimes referred to as 67K type), similar to E. coli and Arabidopsis thaliana SppA peptidases. Unlike the eukaryotic functional homologs that are proposed to be aspartic proteases, site-directed mutagenesis and sequence analysis have shown that members in this subfamily, mostly bacterial, are serine proteases. The predicted active site serine for members in this family occurs in a transmembrane domain. Mutagenesis studies also suggest that the catalytic center comprises a Ser-Lys
Probab=99.15 E-value=2.5e-10 Score=107.32 Aligned_cols=89 Identities=11% Similarity=0.055 Sum_probs=74.0
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEE
Q 015014 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIS 170 (414)
Q Consensus 91 l~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 170 (414)
-+..++.+|.+.|+.+..|+.|++|||+..+ ..| ++.++.++.. .+..+...+|||||
T Consensus 26 ~~~~~~~~l~~~l~~a~~d~~ik~vvL~~~s-~gg-~~~~~~el~~--------------------~i~~~~~~~kpVia 83 (222)
T cd07018 26 SSELSLRDLLEALEKAAEDDRIKGIVLDLDG-LSG-GLAKLEELRQ--------------------ALERFRASGKPVIA 83 (222)
T ss_pred cCCccHHHHHHHHHHHhcCCCeEEEEEECCC-CCC-CHHHHHHHHH--------------------HHHHHHHhCCeEEE
Confidence 3457789999999999999999999999987 455 7777766533 33345667999999
Q ss_pred EECCccccchhhhhccCCeEEEcCCeeEeccc
Q 015014 171 LMDGVTMGFGIGISGHGRYRIVTEKTLLAMPE 202 (414)
Q Consensus 171 avnG~a~GgG~~Lala~D~ria~~~a~f~~pe 202 (414)
.++| |.+||+.|+++||.+++.+.+.|+..-
T Consensus 84 ~~~~-~~sggy~lasaad~I~a~p~~~vg~iG 114 (222)
T cd07018 84 YADG-YSQGQYYLASAADEIYLNPSGSVELTG 114 (222)
T ss_pred EeCC-CCchhhhhhhhCCEEEECCCceEEeec
Confidence 9998 889999999999999999999988753
No 104
>KOG1683 consensus Hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase [Lipid transport and metabolism]
Probab=98.90 E-value=2.3e-09 Score=104.99 Aligned_cols=172 Identities=16% Similarity=0.119 Sum_probs=143.7
Q ss_pred CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHH
Q 015014 75 NGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAE 154 (414)
Q Consensus 75 ~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~ 154 (414)
-+++.+.|+ |+. |..|.++..+|..-++.++.+..+++.++++...+.|++|.|..++.-. .......++.++
T Consensus 65 ~~~~~~dmv-iea-v~edl~Lk~~l~~~le~v~~~~~i~gsntSs~~~~~isa~ld~~e~vvg-----~h~fspa~~m~L 137 (380)
T KOG1683|consen 65 TGFANADMV-IEA-VFEDLELKHELFKSLEKVEPPKCIRGSNTSSLDINVISAGLDRPEMVVG-----MHFFSPAHWMQL 137 (380)
T ss_pred cccccccee-ccc-hhhhHHHHHHHHHHHHhhcCCcceeeeccccCChHHHhhccCchhhhcc-----ccccCHHHHHHH
Confidence 378888898 775 9999999999999999999999889999999888899999999987752 234455688889
Q ss_pred HHHHHHHhhCCCcEEEEECCccccch--hhhhccCCeEEEcC--CeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHH
Q 015014 155 YSLICKISEYKKPYISLMDGVTMGFG--IGISGHGRYRIVTE--KTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYL 230 (414)
Q Consensus 155 ~~l~~~l~~~~kPvIAavnG~a~GgG--~~Lala~D~ria~~--~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l 230 (414)
.+++....+++.|+.+++||++--|| |-++.+|+|++... .-..+..+...++.-+..-.-.+....|.. .+..-
T Consensus 138 lEii~~~~tS~~~iA~Ain~~~~~gk~~vvVg~c~gf~v~r~l~~y~~~~~~~l~e~g~~p~~iD~~~t~fGf~-~g~~~ 216 (380)
T KOG1683|consen 138 LEIILALYTSKLTIATAINGGSPAGKLPVVVGNCCGFRVNRLLPPYTIGLNELLLEIGADPWLIDSLITKFGFR-VGERA 216 (380)
T ss_pred HHHHHhcCCCchHHHHHHhcccccCCccEEeccCCceEEEecccHHHHHHHHHHHHcCCCHHHHHHHHHhcCcc-ccHHH
Confidence 99999999999999999999999998 99999999999984 444567888888544343344445566776 77777
Q ss_pred HhcCCCCCcHHHHHHcCccceecCC
Q 015014 231 GMTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 231 ~ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
+--|.-++ .+||++-|+++++.|.
T Consensus 217 L~d~~gfd-v~eal~~gl~~~~~~r 240 (380)
T KOG1683|consen 217 LADGVGFD-VAEALAVGLGDEIGPR 240 (380)
T ss_pred HhhccCcc-HHHHHhhccchhccch
Confidence 77788898 9999999999999985
No 105
>cd07015 Clp_protease_NfeD Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentially cle
Probab=98.60 E-value=9.1e-07 Score=79.69 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=97.2
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEE
Q 015014 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYI 169 (414)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvI 169 (414)
.++..+..-|.+.++.++++ .++.|+|.=. |-|+++.... .++..|...++||+
T Consensus 9 ~I~~~~~~~l~~~l~~A~~~-~~~~i~l~in-----SPGG~v~~~~--------------------~I~~~i~~~~~pvv 62 (172)
T cd07015 9 QITSYTYDQFDRYITIAEQD-NAEAIIIELD-----TPGGRADAAG--------------------NIVQRIQQSKIPVI 62 (172)
T ss_pred EECHhHHHHHHHHHHHHhcC-CCCeEEEEEE-----CCCCCHHHHH--------------------HHHHHHHhcCcCEE
Confidence 35667778888899988875 4688777532 2344443221 23345667899999
Q ss_pred EEEC---CccccchhhhhccCCeEEEcCCeeEecccccCCCCCC----h---h-HHHH------HhhCCCcH-HHHHHHH
Q 015014 170 SLMD---GVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPD----V---G-FSYI------AAKGPGGG-SVGAYLG 231 (414)
Q Consensus 170 Aavn---G~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~----~---g-~~~~------L~r~~G~~-~~a~~l~ 231 (414)
+.|+ |.|..+|.-++++||.+++.+++.++...+-.|..+. . - .+.. +.+.-|+. ..+..++
T Consensus 63 ~~v~p~g~~AaSag~~I~~a~~~i~m~p~s~iG~~~pi~~~g~~~~~~~~~~ki~~~~~~~~r~~A~~~Gr~~~~a~~~v 142 (172)
T cd07015 63 IYVYPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITNYFIAYIKSLAQESGRNATIAEEFI 142 (172)
T ss_pred EEEecCCCeehhHHHHHHHhcCceEECCCCEEEEccccccCCCCCccccchHHHHHHHHHHHHHHHHHHCcCHHHHHHHH
Confidence 9999 9999999999999999999999999987775433220 0 0 0111 12222321 1556667
Q ss_pred hcCCCCCcHHHHHHcCccceecCC
Q 015014 232 MTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 232 ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
-....++ ++||+++|++|.++..
T Consensus 143 ~~~~~lt-a~EA~~~G~iD~ia~~ 165 (172)
T cd07015 143 TKDLSLT-PEEALKYGVIEVVARD 165 (172)
T ss_pred HhhcCcC-HHHHHHcCCceeeeCC
Confidence 7777899 9999999999999975
No 106
>cd07013 S14_ClpP Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. Additionally, they are implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of proteas
Probab=98.58 E-value=5.1e-07 Score=80.74 Aligned_cols=136 Identities=14% Similarity=0.069 Sum_probs=90.6
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEE
Q 015014 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIS 170 (414)
Q Consensus 91 l~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 170 (414)
++..+.+++.+.|..++.++..+.|+|.=. |.|+++..- ..++..|...++|+++
T Consensus 9 I~~~~~~~~~~~L~~l~~~~~~~~i~l~In-----SpGG~v~~~--------------------~~i~~~i~~~~~~v~~ 63 (162)
T cd07013 9 VEDISANQFAAQLLFLGAVNPEKDIYLYIN-----SPGGDVFAG--------------------MAIYDTIKFIKADVVT 63 (162)
T ss_pred ECcHHHHHHHHHHHHHhcCCCCCCEEEEEE-----CCCCcHHHH--------------------HHHHHHHHhcCCCceE
Confidence 467888999999999998877777776532 223443211 1344567778999999
Q ss_pred EECCccccchhhhhccCC--eEEEcCCeeEecccccCCCCCChhHHH---------------HHhhCCCcH-HHHHHHHh
Q 015014 171 LMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAYLGM 232 (414)
Q Consensus 171 avnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~Gl~P~~g~~~---------------~L~r~~G~~-~~a~~l~l 232 (414)
.+.|.|.++|.-|+++|| .|++.+++.|.+....-|......-.. .+.+.-|.. ..-.+++-
T Consensus 64 ~~~g~aaS~~~~i~~a~~~g~r~~~p~a~~~ih~~~~~~~g~~~d~~~~~~~l~~~~~~~~~~~a~~tg~~~~~i~~~~~ 143 (162)
T cd07013 64 IIDGLAASMGSVIAMAGAKGKRFILPNAMMMIHQPWGGTLGDATDMRIYADLLLKVEGNLVSAYAHKTGQSEEELHADLE 143 (162)
T ss_pred EEEeehhhHHHHHHHcCCCCcEEEecCEEEEEccCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHHHc
Confidence 999999999999999999 688888888876554322211100000 122222321 13344555
Q ss_pred cCCCCCcHHHHHHcCcccee
Q 015014 233 TGKRISTPSDALFAGLGTDY 252 (414)
Q Consensus 233 tG~~i~~a~eA~~~GLv~~v 252 (414)
.+.-++ |+||+++||||++
T Consensus 144 ~~~~~s-a~eA~~~GliD~i 162 (162)
T cd07013 144 RDTWLS-AREAVEYGFADTI 162 (162)
T ss_pred CCcccc-HHHHHHcCCCCcC
Confidence 556668 9999999999975
No 107
>PRK10949 protease 4; Provisional
Probab=98.51 E-value=3.1e-06 Score=90.60 Aligned_cols=163 Identities=17% Similarity=0.127 Sum_probs=103.2
Q ss_pred cCcEEEEEEcCC-----CCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchH
Q 015014 74 PNGVAVITLDRP-----KALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVP 148 (414)
Q Consensus 74 ~~~V~~Itlnrp-----~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~ 148 (414)
++.|++|.++-+ ...+.++. +.+.+.|+.+.+|++|++|||+-..| |+....
T Consensus 325 ~~~Iavi~~~G~I~~g~~~~g~~~~---~~~~~~l~~a~~D~~vkaVvLrInSp-----GGs~~a--------------- 381 (618)
T PRK10949 325 GGSIAVIFANGAIMDGEETPGNVGG---DTTAAQIRDARLDPKVKAIVLRVNSP-----GGSVTA--------------- 381 (618)
T ss_pred CCeEEEEEEEEEEcCCCCcCCCcCH---HHHHHHHHHHHhCCCCcEEEEEecCC-----CCcHHH---------------
Confidence 467888888632 22234544 45677788999999999999986543 222211
Q ss_pred HHHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccc------------cCCCCCChhHH--
Q 015014 149 KVFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN------------GIGLFPDVGFS-- 214 (414)
Q Consensus 149 ~~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~------------~~Gl~P~~g~~-- 214 (414)
....++.+.+++...||||+.+.|.|..||.-++++||.++|.+.+..+---+ ++|+-++...+
T Consensus 382 --se~i~~~i~~~r~~gKPVvas~~~~aASggY~iA~aad~I~a~p~t~tGSIGV~~~~~~~~~ll~klGV~~~~~~~~~ 459 (618)
T PRK10949 382 --SEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLDSIGVHTDGVSTSP 459 (618)
T ss_pred --HHHHHHHHHHHHhcCCcEEEEECCCCccHHHHHHHhcCEEEECCCCceeeCcEEEEccCHHHHHHhcCCceeEEeccc
Confidence 11222334456667899999999999999999999999999999764433111 24432221100
Q ss_pred ---------------------------HHHh-----hCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHHHH
Q 015014 215 ---------------------------YIAA-----KGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGSLK 262 (414)
Q Consensus 215 ---------------------------~~L~-----r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~ 262 (414)
.|+. |-+... . .+-+..|+.++ +++|++.||||++-.-++....+
T Consensus 460 ~~~~~~~~~~s~e~~~~~q~~ld~~y~~F~~~Va~~R~~~~~-~-v~~ia~Grv~t-g~~A~~~GLVD~lG~~~~ai~~a 536 (618)
T PRK10949 460 LADVSITKALPPEFQQMMQLSIENGYKRFITLVADSRHKTPE-Q-IDKIAQGHVWT-GQDAKANGLVDSLGDFDDAVAKA 536 (618)
T ss_pred cCCccccCCCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHH-H-HHHHhcCCccc-HHHHHHcCCCccCCCHHHHHHHH
Confidence 0111 112221 1 23357899999 99999999999996644444333
Q ss_pred HH
Q 015014 263 EA 264 (414)
Q Consensus 263 ~~ 264 (414)
.+
T Consensus 537 ~~ 538 (618)
T PRK10949 537 AE 538 (618)
T ss_pred HH
Confidence 33
No 108
>PRK00277 clpP ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.43 E-value=1.6e-06 Score=80.27 Aligned_cols=139 Identities=13% Similarity=0.033 Sum_probs=88.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCC
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKK 166 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl--~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k 166 (414)
..++..+.+.+...|..++.++..+-|+| .+.| +|+..- ..++..|...+.
T Consensus 38 g~I~~~~~~~i~~~L~~l~~~~~~~~I~l~InSpG-------G~v~~g--------------------~~I~d~i~~~~~ 90 (200)
T PRK00277 38 GEVEDHMANLIVAQLLFLEAEDPDKDIYLYINSPG-------GSVTAG--------------------LAIYDTMQFIKP 90 (200)
T ss_pred CEECHHHHHHHHHHHHHhhccCCCCCEEEEEECCC-------CcHHHH--------------------HHHHHHHHhcCC
Confidence 44778899999999998886544343433 3333 343221 123445677788
Q ss_pred cEEEEECCccccchhhhhccCC--eEEEcCCeeEecccccCCCCCChhH---------------HHHHhhCCCcH-HHHH
Q 015014 167 PYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIAAKGPGGG-SVGA 228 (414)
Q Consensus 167 PvIAavnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~Gl~P~~g~---------------~~~L~r~~G~~-~~a~ 228 (414)
|+++.+.|.|.++|..|+++++ .|++.++++|.+....-|......- ...+...-|.. ....
T Consensus 91 ~v~t~~~G~aaS~a~~I~~ag~~~~r~~~p~s~imih~p~~~~~G~a~di~~~a~~l~~~~~~~~~~~a~~tg~~~~~i~ 170 (200)
T PRK00277 91 DVSTICIGQAASMGAFLLAAGAKGKRFALPNSRIMIHQPLGGFQGQATDIEIHAREILKLKKRLNEILAEHTGQPLEKIE 170 (200)
T ss_pred CEEEEEEeEeccHHHHHHhcCCCCCEEEcCCceEEeccCcccccCChhHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 9999999999999999998754 5777777777665543221100000 01122223321 1344
Q ss_pred HHHhcCCCCCcHHHHHHcCccceecCC
Q 015014 229 YLGMTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 229 ~l~ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
.++-.+.-++ |+||++.||||+|+..
T Consensus 171 ~~~~~~~~ls-a~EA~e~GliD~Ii~~ 196 (200)
T PRK00277 171 KDTDRDNFMS-AEEAKEYGLIDEVLTK 196 (200)
T ss_pred HHhhCCcccc-HHHHHHcCCccEEeec
Confidence 5555666788 9999999999999975
No 109
>PRK12553 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=98.28 E-value=1e-05 Score=75.28 Aligned_cols=139 Identities=14% Similarity=0.051 Sum_probs=96.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcE
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPY 168 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPv 168 (414)
..++..+..++...|..++..+..+.|+|.=. |.|+++..- ..++..|..++.|+
T Consensus 42 g~I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN-----SpGG~v~~g--------------------~~I~d~i~~~~~~v 96 (207)
T PRK12553 42 GQVDDASANDVMAQLLVLESIDPDRDITLYIN-----SPGGSVTAG--------------------DAIYDTIQFIRPDV 96 (207)
T ss_pred ceECHHHHHHHHHHHHHHHhCCCCCCEEEEEe-----CCCCcHHHH--------------------HHHHHHHHhcCCCc
Confidence 34778999999999999987653444444321 223443321 13444677788899
Q ss_pred EEEECCccccchhhhhccCC--eEEEcCCeeEecccccC-CCCCChhH------------------HHHHhhCCCcH-HH
Q 015014 169 ISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGI-GLFPDVGF------------------SYIAAKGPGGG-SV 226 (414)
Q Consensus 169 IAavnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~-Gl~P~~g~------------------~~~L~r~~G~~-~~ 226 (414)
++.+.|.|.+.|.-|+++|| .|++.+++.|.+..... |.. .|- ...+.+.-|.. ..
T Consensus 97 ~t~~~G~aaSaa~lI~~ag~~~~R~~~p~s~imiH~p~~~~~~--~G~a~d~~~~~~~l~~~~~~~~~~ya~~tg~~~e~ 174 (207)
T PRK12553 97 QTVCTGQAASAGAVLLAAGTPGKRFALPNARILIHQPSLGGGI--RGQASDLEIQAREILRMRERLERILAEHTGQSVEK 174 (207)
T ss_pred EEEEEeehhhHHHHHHHcCCcCcEEECCCchhhhcCccccCCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 99999999999999999999 59999999999877653 211 111 11223333432 14
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCC
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
..+++-.+.-++ |+||+++||||+|++.
T Consensus 175 i~~~~~~~~~lt-a~EA~e~GliD~I~~~ 202 (207)
T PRK12553 175 IRKDTDRDKWLT-AEEAKDYGLVDQIITS 202 (207)
T ss_pred HHHHHhcCcccc-HHHHHHcCCccEEcCc
Confidence 455666778898 9999999999999975
No 110
>PRK12319 acetyl-CoA carboxylase subunit alpha; Provisional
Probab=98.26 E-value=0.00027 Score=67.71 Aligned_cols=139 Identities=18% Similarity=0.133 Sum_probs=93.1
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCc
Q 015014 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKP 167 (414)
Q Consensus 88 ~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP 167 (414)
.-+++++-.+...+.++.+++.. +-+|-|.-. ++++. |.+-.+ .-........+..+....+|
T Consensus 76 ~G~~~~~g~rKa~R~~~lA~~~~-lPvV~lvDt-pGa~~-g~~aE~--------------~G~~~~ia~~~~~~s~~~VP 138 (256)
T PRK12319 76 FGQPHPEGYRKALRLMKQAEKFG-RPVVTFINT-AGAYP-GVGAEE--------------RGQGEAIARNLMEMSDLKVP 138 (256)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEEC-CCcCC-CHhHHh--------------ccHHHHHHHHHHHHhCCCCC
Confidence 35688888999988888887653 455555433 24553 332110 00223344566678889999
Q ss_pred EEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcC
Q 015014 168 YISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAG 247 (414)
Q Consensus 168 vIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~G 247 (414)
+|+.|-|.|.|||.-....||++++.+++.|+. .++-|.+..+-+--.....+.+.+ .++ +.++.+.|
T Consensus 139 ~IsVI~G~~~gGgA~a~~~~D~v~m~~~a~~~v-------~~pe~~a~il~~~~~~a~~aa~~~----~~~-a~~l~~~g 206 (256)
T PRK12319 139 IIAIIIGEGGSGGALALAVADQVWMLENTMYAV-------LSPEGFASILWKDGSRATEAAELM----KIT-AGELLEMG 206 (256)
T ss_pred EEEEEeCCcCcHHHHHhhcCCEEEEecCceEEE-------cCHHHHHHHHhcCcccHHHHHHHc----CCC-HHHHHHCC
Confidence 999999999988888888999999999988764 333344444433222211333433 778 99999999
Q ss_pred ccceecCC
Q 015014 248 LGTDYVPS 255 (414)
Q Consensus 248 Lv~~vv~~ 255 (414)
+||+|+|.
T Consensus 207 ~iD~ii~e 214 (256)
T PRK12319 207 VVDKVIPE 214 (256)
T ss_pred CCcEecCC
Confidence 99999985
No 111
>cd07017 S14_ClpP_2 Caseinolytic protease (ClpP) is an ATP-dependent, highly conserved serine protease. Clp protease (caseinolytic protease; ClpP; Peptidase S14) is a highly conserved serine protease present throughout in bacteria and eukaryota, but seems to be absent in archaea, mollicutes and some fungi. Clp proteases are involved in a number of cellular processes such as degradation of misfolded proteins, regulation of short-lived proteins and housekeeping removal of dysfunctional proteins. They are also implicated in the control of cell growth, targeting DNA-binding protein from starved cells. ClpP has also been linked to the tight regulation of virulence genes in the pathogens Listeria monocytogenes and Salmonella typhimurium. This enzyme belong to the family of ATP-dependent proteases; the functional Clp protease is comprised of two components: a proteolytic component and one of several regulatory ATPase components, both of which are required for effective levels of protease activ
Probab=98.24 E-value=9.4e-06 Score=73.22 Aligned_cols=136 Identities=15% Similarity=0.049 Sum_probs=93.3
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEE
Q 015014 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIS 170 (414)
Q Consensus 91 l~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 170 (414)
++.++..++...+..++.++..+.|+|.=. |.|+|+..- ..++..|...+.|+++
T Consensus 18 I~~~~~~~i~~~l~~~~~~~~~~~i~l~in-----SpGG~v~~~--------------------~~i~~~l~~~~~~v~t 72 (171)
T cd07017 18 IDDEVANLIIAQLLYLESEDPKKPIYLYIN-----SPGGSVTAG--------------------LAIYDTMQYIKPPVST 72 (171)
T ss_pred EcHHHHHHHHHHHHHHHccCCCCceEEEEE-----CCCCCHHHH--------------------HHHHHHHHhcCCCEEE
Confidence 567888999999999988766555555322 123343321 1234456677999999
Q ss_pred EECCccccchhhhhccCC--eEEEcCCeeEecccccCCCCCChhH---------------HHHHhhCCCcH-HHHHHHHh
Q 015014 171 LMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGF---------------SYIAAKGPGGG-SVGAYLGM 232 (414)
Q Consensus 171 avnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~Gl~P~~g~---------------~~~L~r~~G~~-~~a~~l~l 232 (414)
.+.|.|.++|.-+++++| .|++.+++.|.+.+...+..-...- ...+...-|.. ..-..++-
T Consensus 73 ~~~g~aaS~~~~i~~~g~~~~r~~~~~a~~~~h~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~~~ 152 (171)
T cd07017 73 ICLGLAASMGALLLAAGTKGKRYALPNSRIMIHQPLGGAGGQASDIEIQAKEILRLRRRLNEILAKHTGQPLEKIEKDTD 152 (171)
T ss_pred EEEeEehhHHHHHHHcCCCCCEEEccchHHHHcCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhh
Confidence 999999999999999999 7999999999988876554322110 00112222322 13445556
Q ss_pred cCCCCCcHHHHHHcCcccee
Q 015014 233 TGKRISTPSDALFAGLGTDY 252 (414)
Q Consensus 233 tG~~i~~a~eA~~~GLv~~v 252 (414)
.+.-++ |+||+++||+|+|
T Consensus 153 ~~~~lt-a~EA~e~GiiD~V 171 (171)
T cd07017 153 RDRYMS-AEEAKEYGLIDKI 171 (171)
T ss_pred CCcccc-HHHHHHcCCCccC
Confidence 777788 9999999999975
No 112
>CHL00198 accA acetyl-CoA carboxylase carboxyltransferase alpha subunit; Provisional
Probab=98.24 E-value=0.00022 Score=70.05 Aligned_cols=139 Identities=13% Similarity=0.067 Sum_probs=92.7
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCc
Q 015014 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKP 167 (414)
Q Consensus 88 ~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP 167 (414)
.-+++++-.+...+.++.+++.. +-+|-|.-. +++++ |.+-.+.. ........+..+....+|
T Consensus 132 ~G~~~p~g~rKa~Rlm~lA~~f~-lPIItlvDT-pGA~~-G~~AE~~G--------------~~~aiar~l~~~a~~~VP 194 (322)
T CHL00198 132 FGMPSPGGYRKALRLMKHANKFG-LPILTFIDT-PGAWA-GVKAEKLG--------------QGEAIAVNLREMFSFEVP 194 (322)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeC-CCcCc-CHHHHHHh--------------HHHHHHHHHHHHHcCCCC
Confidence 45688999999999998887753 444444333 24554 43221100 122233455567889999
Q ss_pred EEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcC
Q 015014 168 YISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAG 247 (414)
Q Consensus 168 vIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~G 247 (414)
+|++|-|.|.|||.-....||++++.+++.|+. +++-|.+..|-+-- +++.+. ....+++ |++.++.|
T Consensus 195 ~IsVViGeggsGGAlal~~aD~V~m~e~a~~sV-------isPEg~a~Il~~d~---~~a~~a-A~~~~it-a~dL~~~g 262 (322)
T CHL00198 195 IICTIIGEGGSGGALGIGIGDSIMMLEYAVYTV-------ATPEACAAILWKDS---KKSLDA-AEALKIT-SEDLKVLG 262 (322)
T ss_pred EEEEEeCcccHHHHHhhhcCCeEEEeCCeEEEe-------cCHHHHHHHHhcch---hhHHHH-HHHcCCC-HHHHHhCC
Confidence 999999999888865555699999999998874 33334444443332 244443 3456899 99999999
Q ss_pred ccceecCC
Q 015014 248 LGTDYVPS 255 (414)
Q Consensus 248 Lv~~vv~~ 255 (414)
+||+|+|.
T Consensus 263 iiD~ii~E 270 (322)
T CHL00198 263 IIDEIIPE 270 (322)
T ss_pred CCeEeccC
Confidence 99999984
No 113
>TIGR00513 accA acetyl-CoA carboxylase, carboxyl transferase, alpha subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the alpha chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=98.16 E-value=0.00041 Score=68.13 Aligned_cols=139 Identities=15% Similarity=0.079 Sum_probs=91.4
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCc
Q 015014 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKP 167 (414)
Q Consensus 88 ~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP 167 (414)
.-+++++-.+...+.++.+++- .+-+|-|.-. +++++ |.+-.+.. ......+.+..+....+|
T Consensus 129 ~G~~~p~g~rKa~R~m~lA~~f-~iPvVtlvDT-pGa~~-g~~aE~~G--------------~~~aia~~l~a~s~~~VP 191 (316)
T TIGR00513 129 FGMPAPEGYRKALRLMKMAERF-KMPIITFIDT-PGAYP-GIGAEERG--------------QSEAIARNLREMARLGVP 191 (316)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEEC-CCCCC-CHHHHHHH--------------HHHHHHHHHHHHHcCCCC
Confidence 3568888999998888888764 3555555433 23443 43322111 123334566678889999
Q ss_pred EEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcC
Q 015014 168 YISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAG 247 (414)
Q Consensus 168 vIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~G 247 (414)
+|++|-|.|.|||.--...||++++.+++.++ ++++-|+...|-+-.. ++.+..- -..++ +.++++.|
T Consensus 192 ~IsVViGeggsGGAla~~~aD~v~m~~~a~~s-------VisPEg~a~Il~kd~~---~a~~aae-~~~~t-a~~l~~~G 259 (316)
T TIGR00513 192 VICTVIGEGGSGGALAIGVGDKVNMLEYSTYS-------VISPEGCAAILWKDAS---KAPKAAE-AMKIT-APDLKELG 259 (316)
T ss_pred EEEEEecccccHHHhhhccCCEEEEecCceEE-------ecCHHHHHHHhccchh---hHHHHHH-HccCC-HHHHHHCC
Confidence 99999999977777555569999999998776 3344444444433221 2222222 36788 99999999
Q ss_pred ccceecCC
Q 015014 248 LGTDYVPS 255 (414)
Q Consensus 248 Lv~~vv~~ 255 (414)
+||.|+|.
T Consensus 260 ~iD~II~e 267 (316)
T TIGR00513 260 LIDSIIPE 267 (316)
T ss_pred CCeEeccC
Confidence 99999984
No 114
>PRK14512 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=98.12 E-value=4.3e-05 Score=70.49 Aligned_cols=139 Identities=16% Similarity=0.042 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEE
Q 015014 91 MNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIS 170 (414)
Q Consensus 91 l~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 170 (414)
++..+...+...|..++..+..+.|+|.=. |-|+++..- ..++..|...+.||++
T Consensus 32 I~~~~~~~i~~~L~~l~~~~~~~~I~l~IN-----SpGG~v~ag--------------------~aI~d~i~~~~~~V~t 86 (197)
T PRK14512 32 INKDLSELFQEKILLLEALDSKKPIFVYID-----SEGGDIDAG--------------------FAIFNMIRFVKPKVFT 86 (197)
T ss_pred EcHHHHHHHHHHHHHHHhcCCCCCEEEEEE-----CCCCCHHHH--------------------HHHHHHHHhCCCCEEE
Confidence 667888899998888876333344444321 223444321 1344467778999999
Q ss_pred EECCccccchhhhhccCCe--EEEcCCeeEecccccCCCCCChhHHH---------------HHhhCCCcH-HHHHHHHh
Q 015014 171 LMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAYLGM 232 (414)
Q Consensus 171 avnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~Gl~P~~g~~~---------------~L~r~~G~~-~~a~~l~l 232 (414)
.+.|.|.+.|.-|+++||- |++.++++|.+....-|+.....-.. .+...-|.. .....++-
T Consensus 87 ~v~G~AaSaaslIl~ag~~~~R~~~p~s~imiHqP~~~~~G~a~di~~~a~~l~~~~~~i~~~~a~~tg~~~~~i~~~~~ 166 (197)
T PRK14512 87 IGVGLVASAAALIFLAAKKESRFSLPNARYLLHQPLSGFKGVATDIEIYANELNKVKSELNDIIAKETGQELDKVEKDTD 166 (197)
T ss_pred EEEeeeHhHHHHHHhcCCcCceeECCCCcEEEEcCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHHhhh
Confidence 9999999999999999985 99999999876555433311111000 111122321 13334444
Q ss_pred cCCCCCcHHHHHHcCccceecCC
Q 015014 233 TGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 233 tG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
....++ |+||+++||+|+|++.
T Consensus 167 ~d~~lt-a~EA~~yGliD~I~~~ 188 (197)
T PRK14512 167 RDFWLD-SSSAVKYGLVFEVVET 188 (197)
T ss_pred cCcccC-HHHHHHcCCccEeecC
Confidence 455688 9999999999999975
No 115
>PLN03230 acetyl-coenzyme A carboxylase carboxyl transferase; Provisional
Probab=98.10 E-value=0.00077 Score=67.99 Aligned_cols=138 Identities=16% Similarity=0.095 Sum_probs=90.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcE
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPY 168 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPv 168 (414)
.+++++-.+...+.++.+++.. +=+|-|.-.. +++ .|.+-.+.. ........+..+....+|+
T Consensus 200 G~~~peGyRKAlR~mklAekf~-lPIVtLVDTp-GA~-pG~~AEe~G--------------qa~aIAr~l~ams~l~VPi 262 (431)
T PLN03230 200 AMPQPNGYRKALRFMRHAEKFG-FPILTFVDTP-GAY-AGIKAEELG--------------QGEAIAFNLREMFGLRVPI 262 (431)
T ss_pred CCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCC-CcC-CCHHHHHHh--------------HHHHHHHHHHHHhcCCCCE
Confidence 4688999999999998887653 4555444332 344 343332211 2233445666788999999
Q ss_pred EEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcCc
Q 015014 169 ISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAGL 248 (414)
Q Consensus 169 IAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GL 248 (414)
|+.|-|.+.|||.-...+||+++|.+++.++. .++-|.+..|-+--.....+.+ ...++ |+++++.|+
T Consensus 263 ISVViGeGgSGGAlalg~aD~VlMle~A~ysV-------isPEgaAsILwkd~~~A~eAAe----alkit-A~dL~~~Gi 330 (431)
T PLN03230 263 IATVIGEGGSGGALAIGCGNRMLMMENAVYYV-------ASPEACAAILWKSAAAAPKAAE----ALRIT-AAELVKLGV 330 (431)
T ss_pred EEEEeCCCCcHHHHHhhcCCEEEEecCCEEEe-------cCHHHHHHHHhccccchHHHHH----HcCCC-HHHHHhCCC
Confidence 99999999666655455789999999987653 3333444444332221113333 34899 999999999
Q ss_pred cceecCC
Q 015014 249 GTDYVPS 255 (414)
Q Consensus 249 v~~vv~~ 255 (414)
||+|+|.
T Consensus 331 ID~II~E 337 (431)
T PLN03230 331 VDEIVPE 337 (431)
T ss_pred CeEeccC
Confidence 9999984
No 116
>PRK05724 acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated
Probab=98.07 E-value=0.00076 Score=66.32 Aligned_cols=139 Identities=15% Similarity=0.104 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCc
Q 015014 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKP 167 (414)
Q Consensus 88 ~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP 167 (414)
.-+++++-.+...+.++.+++- ++-+|-|.-. +++++ |.+-.+- .........+.++....+|
T Consensus 129 ~G~~~peg~rKa~R~m~lA~~f-~lPIVtlvDT-pGa~~-G~~aE~~--------------G~~~aia~~l~~~a~~~VP 191 (319)
T PRK05724 129 FGMPRPEGYRKALRLMKMAEKF-GLPIITFIDT-PGAYP-GIGAEER--------------GQSEAIARNLREMARLKVP 191 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeC-CCCCC-CHHHHhc--------------cHHHHHHHHHHHHhCCCCC
Confidence 3568889999988888887764 3555555443 24444 4332210 0223344566778899999
Q ss_pred EEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcC
Q 015014 168 YISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAG 247 (414)
Q Consensus 168 vIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~G 247 (414)
+|++|-|.|.|||.-....||++++.+++.|+ ++++-|++..|-+-.. .+.+..- ...++ +.++++.|
T Consensus 192 ~IsVIiGeg~sGGAla~~~aD~v~m~~~A~~s-------visPEg~a~Il~~~~~---~a~~aae-~~~it-a~~l~~~g 259 (319)
T PRK05724 192 IICTVIGEGGSGGALAIGVGDRVLMLEYSTYS-------VISPEGCASILWKDAS---KAPEAAE-AMKIT-AQDLKELG 259 (319)
T ss_pred EEEEEeCCccHHHHHHHhccCeeeeecCceEe-------ecCHHHHHHHHhcCch---hHHHHHH-HcCCC-HHHHHHCC
Confidence 99999999977777555569999998888765 4444555555544332 3333333 56788 99999999
Q ss_pred ccceecCC
Q 015014 248 LGTDYVPS 255 (414)
Q Consensus 248 Lv~~vv~~ 255 (414)
+||.|+|.
T Consensus 260 ~iD~II~E 267 (319)
T PRK05724 260 IIDEIIPE 267 (319)
T ss_pred CceEeccC
Confidence 99999974
No 117
>PRK11778 putative inner membrane peptidase; Provisional
Probab=98.06 E-value=2.8e-05 Score=76.83 Aligned_cols=155 Identities=14% Similarity=0.064 Sum_probs=93.4
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHH
Q 015014 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTA 153 (414)
Q Consensus 74 ~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (414)
.+.|++|.++.+=..+ ....+.+++...+..+..+ .+|||+-..| |+.+.....
T Consensus 89 ~~~v~VI~~~G~I~~~-~~~~l~e~i~a~l~~A~~~---~aVvLridSp-----GG~v~~s~~----------------- 142 (330)
T PRK11778 89 KPRLFVLDFKGDIDAS-EVESLREEITAILAVAKPG---DEVLLRLESP-----GGVVHGYGL----------------- 142 (330)
T ss_pred CCeEEEEEEEEEECCC-cchhhHHHHHHHHHhccCC---CeEEEEEeCC-----CCchhHHHH-----------------
Confidence 4678888888542111 1123445666666554433 5677765433 222221100
Q ss_pred HHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHH------------------
Q 015014 154 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY------------------ 215 (414)
Q Consensus 154 ~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~------------------ 215 (414)
....+.++....||+|+.+++.|..||.-++++||-++|.+.+.++.--+-.. .|......
T Consensus 143 a~~~l~~lr~~~kpVva~v~~~AASggY~iAsaAD~I~A~P~a~vGSIGVi~~-~~~~~~lLeKlGI~~evi~aG~yK~a 221 (330)
T PRK11778 143 AASQLQRLRDAGIPLTVAVDKVAASGGYMMACVADKIIAAPFAIVGSIGVVAQ-IPNFHRLLKKHDIDVELHTAGEYKRT 221 (330)
T ss_pred HHHHHHHHHhcCCCEEEEECCchhhHHHHHHHhCCEEEECCCCeEEeeeeeee-ccCHHHHHHHCCCceEEEEecCccCC
Confidence 00113356677899999999999999999999999999999886665433111 12111100
Q ss_pred -------------------------HH---hhCCCcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCH
Q 015014 216 -------------------------IA---AKGPGGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNL 258 (414)
Q Consensus 216 -------------------------~L---~r~~G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l 258 (414)
|+ .+--+ . ...+-+.+|+.+. |++|++.||||++...+++
T Consensus 222 ~~pf~~~see~Re~~q~~Ld~~y~~F~~~Va~~R~-~-l~~~~va~G~v~~-g~~Al~~GLVD~Ig~~dd~ 289 (330)
T PRK11778 222 LTLFGENTEEGREKFREELEETHQLFKDFVQRYRP-Q-LDIDKVATGEHWY-GQQALELGLVDEIQTSDDY 289 (330)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-c-CCHHHHHhCCCcC-HHHHHHCCCCCcCCCHHHH
Confidence 11 11111 0 1234467899999 9999999999999876554
No 118
>CHL00028 clpP ATP-dependent Clp protease proteolytic subunit
Probab=98.06 E-value=5.6e-05 Score=69.84 Aligned_cols=140 Identities=9% Similarity=0.044 Sum_probs=94.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCC
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKK 166 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl--~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k 166 (414)
..+|.++.+++...|..++.++..+-|.| -+.| +|+.. ...++..+...+.
T Consensus 37 ~~i~~~~a~~ii~~ll~L~~~~~~~~I~l~INSpG-------G~v~~--------------------g~aIyd~m~~~~~ 89 (200)
T CHL00028 37 QEVDDEIANQLIGLMVYLSIEDDTKDLYLFINSPG-------GSVIS--------------------GLAIYDTMQFVKP 89 (200)
T ss_pred CeecHHHHHHHHHHHHHHhccCCCCCEEEEEeCCC-------cchhh--------------------HHHHHHHHHhcCC
Confidence 34889999999999999885443344433 3443 33321 1234456778899
Q ss_pred cEEEEECCccccchhhhhccCC--eEEEcCCeeEecccccCCCCCChhHH----------------HHHhhCCCcH-HHH
Q 015014 167 PYISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFS----------------YIAAKGPGGG-SVG 227 (414)
Q Consensus 167 PvIAavnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~Gl~P~~g~~----------------~~L~r~~G~~-~~a 227 (414)
||.+.+.|.|.+.|.-|++++| -|++.++++|.+.....|+.-+...- ..+.+.-|.. ...
T Consensus 90 ~V~Tv~~G~AaS~aslIl~aG~kg~R~~~p~s~imiHqp~~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~Tg~~~e~i 169 (200)
T CHL00028 90 DVHTICLGLAASMASFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETITRVYAQRTGKPLWVI 169 (200)
T ss_pred CEEEEEEEehHHHHHHHHhCCCCCCEEecCCCeEEEecCccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHHH
Confidence 9999999999999999999999 69999999999887765532111110 0111122321 123
Q ss_pred HHHHhcCCCCCcHHHHHHcCccceecCCC
Q 015014 228 AYLGMTGKRISTPSDALFAGLGTDYVPSG 256 (414)
Q Consensus 228 ~~l~ltG~~i~~a~eA~~~GLv~~vv~~~ 256 (414)
.+++-...-++ |+||+++||||+|+.+.
T Consensus 170 ~~~~~r~~~lt-a~EA~eyGliD~I~~~~ 197 (200)
T CHL00028 170 SEDMERDVFMS-ATEAKAYGIVDLVAVNN 197 (200)
T ss_pred HHHhhcCccCC-HHHHHHcCCCcEEeecC
Confidence 34445555688 99999999999999754
No 119
>PF00574 CLP_protease: Clp protease; InterPro: IPR001907 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to the MEROPS peptidase family S14 (ClpP endopeptidase family, clan SK). ClpP is an ATP-dependent protease that cleaves a number of proteins, such as casein and albumin []. It exists as a heterodimer of ATP-binding regulatory A and catalytic P subunits, both of which are required for effective levels of protease activity in the presence of ATP [], although the P subunit alone does possess some catalytic activity. This family of sequences represent the P subunit. Proteases highly similar to ClpP have been found to be encoded in the genome of bacteria, metazoa, some viruses and in the chloroplast of plants. A number of the proteins in this family are classified as non-peptidase homologues as they have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for catalytic activity. ; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2ZL3_L 2ZL0_F 2ZL2_M 2ZL4_C 1TG6_D 2F6I_D 3V5I_b 3V5E_M 3QWD_D 2DEO_A ....
Probab=98.06 E-value=8.6e-06 Score=74.07 Aligned_cols=137 Identities=18% Similarity=0.127 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHHHHhcCCCce--EEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcE
Q 015014 91 MNLDMDIKYKSFLDEWESDPRVK--CVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPY 168 (414)
Q Consensus 91 l~~~m~~eL~~~l~~~~~d~~v~--~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPv 168 (414)
+|.++...+...|..++..+..+ .|.|.+.| +|+..- ..++..|..++.|+
T Consensus 25 I~~~~~~~~~~~L~~l~~~~~~~~i~i~INSpG-------G~v~~g--------------------~~i~~~i~~~~~~v 77 (182)
T PF00574_consen 25 IDEESANRLISQLLYLENEDKNKPINIYINSPG-------GDVDAG--------------------LAIYDAIRSSKAPV 77 (182)
T ss_dssp BSHHHHHHHHHHHHHHHHHTSSSEEEEEEEECE-------BCHHHH--------------------HHHHHHHHHSSSEE
T ss_pred cCHHHHHHHHHHHHHHhccCCCceEEEEEcCCC-------CccHHH--------------------HHHHHHHHhcCCCe
Confidence 68899999999888774332222 23344443 444321 23455788899999
Q ss_pred EEEECCccccchhhhhccCCe--EEEcCCeeEecccccCCCCCChhHHH---------------HHhhCCCcH-HHHHHH
Q 015014 169 ISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAYL 230 (414)
Q Consensus 169 IAavnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~Gl~P~~g~~~---------------~L~r~~G~~-~~a~~l 230 (414)
++.+.|.|.+.|.-++++||. |++.+++.|.+.+...+......... .+...-|.. ..-.++
T Consensus 78 ~t~~~G~aaSaa~~i~~ag~~~~R~~~~~s~~m~H~p~~~~~g~~~~l~~~~~~l~~~~~~~~~~~~~~tg~~~~~i~~~ 157 (182)
T PF00574_consen 78 TTVVLGLAASAATLIFLAGDKGKRYASPNSRFMIHQPSTGSGGNASELREQAKELEKLNERIANIYAERTGLSKEEIEEL 157 (182)
T ss_dssp EEEEEEEEETHHHHHHHTSSTTTEEE-TT-EEEES-CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHHH
T ss_pred EEEEeCccccceehhhhcCCcCceeeeecCEEEeecceeecccccchhHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 999999999999999999999 89999999999888655432111111 111112321 123344
Q ss_pred HhcCCCCCcHHHHHHcCccceecCC
Q 015014 231 GMTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 231 ~ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
+-...-++ |+||+++||+|+|+..
T Consensus 158 ~~~~~~l~-a~EA~~~GiiD~I~~~ 181 (182)
T PF00574_consen 158 MDRDTWLS-AEEALEYGIIDEIIES 181 (182)
T ss_dssp CSSTEEEE-HHHHHHHTSSSEEESS
T ss_pred HhCCcccc-HHHHHHcCCCCEeccC
Confidence 44444577 9999999999999853
No 120
>PLN03229 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Probab=98.05 E-value=0.001 Score=71.10 Aligned_cols=139 Identities=12% Similarity=0.048 Sum_probs=94.2
Q ss_pred CCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCc
Q 015014 88 LNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKP 167 (414)
Q Consensus 88 ~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP 167 (414)
.-+++++-++...+.++.++... +-+|-|.=. +++++ |.+..+.. ...........+....+|
T Consensus 220 fG~~~peGyRKAlRlmkLAekfg-LPIVtLVDT-pGA~p-G~~AEe~G--------------q~~aIArnl~amasl~VP 282 (762)
T PLN03229 220 FGMPTPHGYRKALRMMYYADHHG-FPIVTFIDT-PGAYA-DLKSEELG--------------QGEAIAHNLRTMFGLKVP 282 (762)
T ss_pred CCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEEC-CCcCC-CchhHHHh--------------HHHHHHHHHHHHhCCCCC
Confidence 34678888888888888887653 444444332 24554 33332211 122334556677889999
Q ss_pred EEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCCCCCcHHHHHHcC
Q 015014 168 YISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGKRISTPSDALFAG 247 (414)
Q Consensus 168 vIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~~i~~a~eA~~~G 247 (414)
+|++|-|.|.|||.-....||+++|.+++.|+ +.++-|++..|-+-.. ++.+ +.....|+ |++.++.|
T Consensus 283 ~ISVViGeggSGGAlA~g~aD~VlMle~A~~s-------VisPEgaAsILwkd~~---~A~e-AAe~lkiT-a~dL~~lG 350 (762)
T PLN03229 283 IVSIVIGEGGSGGALAIGCANKLLMLENAVFY-------VASPEACAAILWKSAK---AAPK-AAEKLRIT-AQELCRLQ 350 (762)
T ss_pred EEEEEeCCcchHHHHHhhcCCEEEEecCCeEE-------ecCHHHHHHHHhcCcc---cHHH-HHHHcCCC-HHHHHhCC
Confidence 99999999988887777789999999988755 3444455555544432 3333 34457899 99999999
Q ss_pred ccceecCC
Q 015014 248 LGTDYVPS 255 (414)
Q Consensus 248 Lv~~vv~~ 255 (414)
+||.|+|.
T Consensus 351 iiD~IIpE 358 (762)
T PLN03229 351 IADGIIPE 358 (762)
T ss_pred CCeeeccC
Confidence 99999984
No 121
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=97.99 E-value=7.7e-05 Score=73.90 Aligned_cols=136 Identities=18% Similarity=0.147 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCc
Q 015014 96 DIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDGV 175 (414)
Q Consensus 96 ~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~ 175 (414)
.+.+.+.++.+..|+.+++|||.=..| |+.... ....++.+.++..-. ||++.|+++
T Consensus 82 ~~~~~~~l~~~~~~~~vk~vvL~inSP-----GG~v~a-----------------s~~i~~~l~~l~~~~-PV~v~v~~~ 138 (317)
T COG0616 82 GDDIEEILRAARADPSVKAVVLRINSP-----GGSVVA-----------------SELIARALKRLRAKK-PVVVSVGGY 138 (317)
T ss_pred HHHHHHHHHHHhcCCCCceEEEEEECc-----CCchhH-----------------HHHHHHHHHHHhhcC-CEEEEECCe
Confidence 445566688888999999999864322 222211 112233444455444 999999999
Q ss_pred cccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHH----------------------------------------
Q 015014 176 TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSY---------------------------------------- 215 (414)
Q Consensus 176 a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~---------------------------------------- 215 (414)
|..||..+|++||.+||++.+..|=--+..+ .|......
T Consensus 139 AASGGY~IA~aAd~I~a~p~si~GSIGVi~~-~~~~~~l~~k~Gv~~~~~~ag~~k~~~~~~~~~t~e~~~~~q~~~~e~ 217 (317)
T COG0616 139 AASGGYYIALAADKIVADPSSITGSIGVISG-APNFEELLEKLGVEKEVITAGEYKDILSPFRPLTEEEREILQKEIDET 217 (317)
T ss_pred ecchhhhhhccCCEEEecCCceeeeceeEEe-cCCHHHHHHhcCCceeeeeccccccccCcccCCCHHHHHHHHHHHHHH
Confidence 9999999999999999999886653333222 12221111
Q ss_pred ------HHhhCCC-cHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCC
Q 015014 216 ------IAAKGPG-GGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 257 (414)
Q Consensus 216 ------~L~r~~G-~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~ 257 (414)
.+..--+ .. ....-+.+|+-++ +++|++.||||++...++
T Consensus 218 y~~F~~~V~~~R~~~~-~~~~~~a~g~v~~-g~~A~~~gLVDelg~~~~ 264 (317)
T COG0616 218 YDEFVDKVAEGRGLSD-EAVDKLATGRVWT-GQQALELGLVDELGGLDD 264 (317)
T ss_pred HHHHHHHHHhcCCCCh-hHHHHHhccceec-HHHhhhcCCchhcCCHHH
Confidence 0110001 11 2234678899999 999999999999975433
No 122
>TIGR00493 clpP ATP-dependent Clp protease, proteolytic subunit ClpP. This model for the proteolytic subunit ClpP has been rebuilt to a higher stringency. In every bacterial genome with the ClpXP machine, a ClpP protein will be found that scores with this model. In general, this ClpP member will be encoded adjacent to the clpX gene, as were all examples used in the seed alignment. A large fraction of genomes have one or more additional ClpP paralogs, sometimes encoded nearby and sometimes elsewhere. The stringency of the trusted cutoff used here excludes the more divergent ClpP paralogs from being called authentic ClpP by this model.
Probab=97.97 E-value=0.00012 Score=67.34 Aligned_cols=140 Identities=14% Similarity=-0.002 Sum_probs=90.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcE
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPY 168 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPv 168 (414)
..++..+...+...|..++.++..+-|+|.=. |.|+|+..- ..++..|...+.|+
T Consensus 33 g~I~~~~~~~ii~~L~~l~~~~~~~~i~l~In-----SpGG~v~~g--------------------~~I~d~l~~~~~~v 87 (191)
T TIGR00493 33 GEVNDSVANLIVAQLLFLEAEDPEKDIYLYIN-----SPGGSITAG--------------------LAIYDTMQFIKPDV 87 (191)
T ss_pred cEEChHHHHHHHHHHHHhhccCCCCCEEEEEE-----CCCCCHHHH--------------------HHHHHHHHhcCCCE
Confidence 34667788888888888886554444444322 124444321 12334566677788
Q ss_pred EEEECCccccchhhhhccCC--eEEEcCCeeEecccccCCCCCChhHH---------------HHHhhCCCcH-HHHHHH
Q 015014 169 ISLMDGVTMGFGIGISGHGR--YRIVTEKTLLAMPENGIGLFPDVGFS---------------YIAAKGPGGG-SVGAYL 230 (414)
Q Consensus 169 IAavnG~a~GgG~~Lala~D--~ria~~~a~f~~pe~~~Gl~P~~g~~---------------~~L~r~~G~~-~~a~~l 230 (414)
...+.|.|.+.|.-|++++| .|++.+++.|.+.+..-|......-. ..+.+.-|.. ....++
T Consensus 88 ~t~~~G~AaSaaslI~~aG~~~~r~~~p~s~imiH~p~~~~~G~a~d~~~~a~~l~~~~~~~~~~ya~~tg~~~~~i~~~ 167 (191)
T TIGR00493 88 STICIGQAASMGAFLLSAGAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQANEILRLKGLLNDILANHTGQSLEQIEKD 167 (191)
T ss_pred EEEEEEeeccHHHHHHhcCCCCcEEecCCceEEEecCcccccCCcchhHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 88889999999999998766 69999999999876653332111111 0122223321 144455
Q ss_pred HhcCCCCCcHHHHHHcCccceecC
Q 015014 231 GMTGKRISTPSDALFAGLGTDYVP 254 (414)
Q Consensus 231 ~ltG~~i~~a~eA~~~GLv~~vv~ 254 (414)
+-.+..++ |+||+++||+|+++.
T Consensus 168 ~~~~~~lt-a~EA~~~GliD~ii~ 190 (191)
T TIGR00493 168 TERDFFMS-AEEAKEYGLIDSVLT 190 (191)
T ss_pred hhCCccCc-HHHHHHcCCccEEec
Confidence 66666788 999999999999974
No 123
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=97.97 E-value=0.00021 Score=68.19 Aligned_cols=110 Identities=15% Similarity=0.159 Sum_probs=83.5
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHH
Q 015014 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTA 153 (414)
Q Consensus 74 ~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (414)
++.+..+.+ |- .+-++.+..+++.++++...++..+ .++|...| +++. .
T Consensus 58 qe~~~~~gi--Pi-~~~I~i~dse~v~raI~~~~~~~~I-dLii~TpG-------G~v~--------------------A 106 (285)
T PF01972_consen 58 QERVSFLGI--PI-YRYIDIDDSEFVLRAIREAPKDKPI-DLIIHTPG-------GLVD--------------------A 106 (285)
T ss_pred ccccceecc--cc-ceeEcHhhHHHHHHHHHhcCCCCce-EEEEECCC-------CcHH--------------------H
Confidence 444555444 33 3678889999999999988777655 34455444 2322 1
Q ss_pred HHHHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHH
Q 015014 154 EYSLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFS 214 (414)
Q Consensus 154 ~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~ 214 (414)
..++...+.+.+.|+++.|+..|+.||.-+|++||-+++.+.+.+|--+.++|-.|..+-.
T Consensus 107 A~~I~~~l~~~~~~v~v~VP~~A~SAGTlIALaADeIvM~p~a~LGpiDPqi~~~pA~sil 167 (285)
T PF01972_consen 107 AEQIARALREHPAKVTVIVPHYAMSAGTLIALAADEIVMGPGAVLGPIDPQIGQYPAASIL 167 (285)
T ss_pred HHHHHHHHHhCCCCEEEEECcccccHHHHHHHhCCeEEECCCCccCCCCccccCCChHHHH
Confidence 1245557888999999999999999999999999999999999999999999998865443
No 124
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=97.83 E-value=0.0011 Score=64.11 Aligned_cols=152 Identities=15% Similarity=0.075 Sum_probs=92.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcC----CCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESD----PRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFT 152 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d----~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (414)
|.++-.+.--..-++....-+.+..+++.+.+| ..+-+|.|.-+| ++ .+.+-.. .+. ...
T Consensus 61 v~v~a~D~t~~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSg-Ga-----RlqEg~~---------~L~-~~a 124 (274)
T TIGR03133 61 VVVAAQEGRFQGGSVGEVHGAKIVGALRLAIEDNRKGQPTAVVLLLDTG-GV-----RLQEANA---------GLI-AIA 124 (274)
T ss_pred EEEEEECCCccCcCCCHHHHHHHHHHHHHHHhhhhccCCCCEEEEEcCC-Cc-----ChhhhHH---------HHH-HHH
Confidence 555555554455688888888999999888651 113455554443 23 3322110 000 111
Q ss_pred HHHHHHHHHhhCCCcEEEEECCc--cccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcH-HHHHH
Q 015014 153 AEYSLICKISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGG-SVGAY 229 (414)
Q Consensus 153 ~~~~l~~~l~~~~kPvIAavnG~--a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~-~~a~~ 229 (414)
..+..+..+... .|+|+++-|. |.||+..++..||++|+++++++++.- ...+....|.. --..+
T Consensus 125 ~i~~~~~~ls~~-vP~Isvv~Gp~gc~GG~a~~a~l~D~vim~~~a~i~~aG-----------P~VIe~~~G~e~~~~~d 192 (274)
T TIGR03133 125 EIMRAILDARAA-VPVIGVIGGRVGCFGGMGIAAGLCSYLIMTEEGRLGLSG-----------PEVIEQEAGVEEFDSRD 192 (274)
T ss_pred HHHHHHHHHhCC-CCEEEEEeCCCCcchHHHHHHhcCCEEEEeCCcEEeccC-----------HHHHHHhcCCCccCHHH
Confidence 112223344444 9999999999 899999999999999999988777521 11122222310 01233
Q ss_pred HHhcCCCCCcHHHHHHcCccceecCCCC
Q 015014 230 LGMTGKRISTPSDALFAGLGTDYVPSGN 257 (414)
Q Consensus 230 l~ltG~~i~~a~eA~~~GLv~~vv~~~~ 257 (414)
-.|.-+.+. ++.....|++|.+++++.
T Consensus 193 ~~l~~~~lG-G~~~~~sG~~D~~v~dd~ 219 (274)
T TIGR03133 193 RALVWRTTG-GKHRFLSGDADVLVEDDV 219 (274)
T ss_pred hcccccccc-hHhHhhcccceEEeCCHH
Confidence 344555676 677888999999998743
No 125
>PRK12551 ATP-dependent Clp protease proteolytic subunit; Reviewed
Probab=97.81 E-value=0.00029 Score=64.88 Aligned_cols=139 Identities=13% Similarity=0.023 Sum_probs=91.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCc
Q 015014 90 AMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKP 167 (414)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~v~~vVl--~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kP 167 (414)
.++.++.+++...|..++.++..+-|.| -+.| +|+..- ...+..|...+-|
T Consensus 33 ~i~~~~a~~ii~~Ll~l~~~~~~~~I~l~INSpG-------G~v~~g--------------------~aIyd~m~~~~~~ 85 (196)
T PRK12551 33 PVTSDSANRIVAQLLFLEAEDPEKDIYLYINSPG-------GSVYDG--------------------LGIFDTMQHVKPD 85 (196)
T ss_pred eecHHHHHHHHHHHHHhhccCCCCCEEEEEeCCC-------cchhhH--------------------HHHHHHHHhcCCC
Confidence 4889999999999999886443343333 3433 333221 1344467778889
Q ss_pred EEEEECCccccchhhhhccCCe--EEEcCCeeEecccccCCCCCChhHHH---------------HHhhCCCcH-HHHHH
Q 015014 168 YISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGAY 229 (414)
Q Consensus 168 vIAavnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~Gl~P~~g~~~---------------~L~r~~G~~-~~a~~ 229 (414)
|+..+.|.|.+.|.-|++++|- |++.++++|.+....-|..-...-.. .+.+.-|.. ..-.+
T Consensus 86 V~t~~~G~AaS~AslIl~aG~~~~R~~~p~a~iMIHqP~~~~~G~a~di~~~a~~l~~~~~~~~~~ya~~tG~~~~~i~~ 165 (196)
T PRK12551 86 VHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQPLGGARGQASDIRIQADEILFLKERLNTELSERTGQPLERIQE 165 (196)
T ss_pred EEEEEEEEehhHHHHHHhCCCCCceecCCCCEEEEecCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHHH
Confidence 9999999999999999999985 89999999988776433211111000 122222321 12334
Q ss_pred HHhcCCCCCcHHHHHHcCccceecCCC
Q 015014 230 LGMTGKRISTPSDALFAGLGTDYVPSG 256 (414)
Q Consensus 230 l~ltG~~i~~a~eA~~~GLv~~vv~~~ 256 (414)
++-....++ |+||+++||+|+|++..
T Consensus 166 ~~~rd~~ms-a~EA~eyGliD~I~~~~ 191 (196)
T PRK12551 166 DTDRDFFMS-PSEAVEYGLIDLVIDKR 191 (196)
T ss_pred HhhcCcCCC-HHHHHHcCCCcEEeccC
Confidence 444445577 99999999999999764
No 126
>PRK14514 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.75 E-value=0.00036 Score=65.33 Aligned_cols=139 Identities=10% Similarity=-0.027 Sum_probs=90.0
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEE--EEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCC
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCV--LIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKK 166 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~v--Vl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k 166 (414)
-.+|..+.+.+...|..++..+.-+-| .|-+.| +++..- ..++..+...+-
T Consensus 61 ~~Idd~~a~~i~aqLl~L~~~~~~~~I~lyINSpG-------Gsv~aG--------------------laIyd~m~~~~~ 113 (221)
T PRK14514 61 TQIDDYTANTIQAQLLYLDSVDPGKDISIYINSPG-------GSVYAG--------------------LGIYDTMQFISS 113 (221)
T ss_pred CEEcHHHHHHHHHHHHHHhccCCCCCEEEEEECCC-------cchhhH--------------------HHHHHHHHhcCC
Confidence 347888899999887777653222222 234444 232211 123446777889
Q ss_pred cEEEEECCccccchhhhhccCCe--EEEcCCeeEecccccCCCCCChhHHH---------------HHhhCCCcH-HHHH
Q 015014 167 PYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY---------------IAAKGPGGG-SVGA 228 (414)
Q Consensus 167 PvIAavnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~Gl~P~~g~~~---------------~L~r~~G~~-~~a~ 228 (414)
||.+.+.|.|.+.|.-|++++|. |++.++++|.+....-|......-.. .+.+.-|.. ....
T Consensus 114 ~V~tv~~G~AAS~AslIl~aG~~gkR~~~pna~iMiHqP~~~~~G~a~di~i~a~el~~~~~~i~~iya~~TG~~~e~I~ 193 (221)
T PRK14514 114 DVATICTGMAASMASVLLVAGTKGKRSALPHSRVMIHQPLGGAQGQASDIEITAREIQKLKKELYTIIADHSGTPFDKVW 193 (221)
T ss_pred CEEEEEEEEehhHHHHHHhcCCCCceeeCCCCEEEeccCCcccCCCcchHHHHHHHHHHHHHHHHHHHHHHHCcCHHHHH
Confidence 99999999999999999999996 99999999988776544321111000 112222321 1233
Q ss_pred HHHhcCCCCCcHHHHHHcCccceecCC
Q 015014 229 YLGMTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 229 ~l~ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
+++-....++ |+||+++||||+|+..
T Consensus 194 ~~~~rd~wmt-A~EA~eyGliD~Vi~~ 219 (221)
T PRK14514 194 ADSDRDYWMT-AQEAKEYGMIDEVLIK 219 (221)
T ss_pred HHhhcCccCC-HHHHHHcCCccEEeec
Confidence 4445555688 9999999999999864
No 127
>PRK14513 ATP-dependent Clp protease proteolytic subunit; Provisional
Probab=97.75 E-value=0.00047 Score=63.66 Aligned_cols=139 Identities=14% Similarity=0.079 Sum_probs=92.5
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceE--EEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCC
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKC--VLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKK 166 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~--vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~k 166 (414)
-.++.++.+.+...|..++..+.-+- |-|-+.| +|+..- ..++..|...+-
T Consensus 34 ~~i~~~~a~~ii~~Ll~L~~~~~~~~I~l~INSpG-------G~v~~G--------------------laIyd~m~~~~~ 86 (201)
T PRK14513 34 TPIESQMANTIVAQLLLLDSQNPEQEIQMYINCPG-------GEVYAG--------------------LAIYDTMRYIKA 86 (201)
T ss_pred CEEcHHHHHHHHHHHHHhhccCCCCCEEEEEECCC-------CchhhH--------------------HHHHHHHHhcCC
Confidence 45788999999888888876432222 2334444 333221 234456778889
Q ss_pred cEEEEECCccccchhhhhccCCe--EEEcCCeeEecccccCCCCCChhHHH-----------------HHhhCCCcH-HH
Q 015014 167 PYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY-----------------IAAKGPGGG-SV 226 (414)
Q Consensus 167 PvIAavnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~Gl~P~~g~~~-----------------~L~r~~G~~-~~ 226 (414)
||...+.|.|.+.|..|++++|- |++.+++++-+.....|+. +...- .+.+.-|.. ..
T Consensus 87 ~V~Ti~~G~AaS~As~il~aG~kgkR~~~pna~iMIHqp~~~~~--G~a~di~~~a~el~~~~~~l~~iya~~Tg~~~~~ 164 (201)
T PRK14513 87 PVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRIMIHQGSAGFR--GNTPDLEVQAKEVLFLRDTLVDIYHRHTDLPHEK 164 (201)
T ss_pred CEEEEEEeeehhhHHHHHhcCCCCcEEecCCeEEEEecCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHCcCHHH
Confidence 99999999999999999999995 9999999998877765531 11111 112222321 02
Q ss_pred HHHHHhcCCCCCcHHHHHHcCccceecCCCC
Q 015014 227 GAYLGMTGKRISTPSDALFAGLGTDYVPSGN 257 (414)
Q Consensus 227 a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~ 257 (414)
-.+++-...-++ |+||+++||||+|+++.+
T Consensus 165 I~~~~~rd~~ms-a~EA~eyGliD~I~~~~~ 194 (201)
T PRK14513 165 LLRDMERDYFMS-PEEAKAYGLIDSVIEPTR 194 (201)
T ss_pred HHHHhccCcccC-HHHHHHcCCCcEEeccCC
Confidence 233344444577 999999999999997644
No 128
>PRK07189 malonate decarboxylase subunit beta; Reviewed
Probab=97.50 E-value=0.0022 Score=62.65 Aligned_cols=153 Identities=15% Similarity=0.106 Sum_probs=89.1
Q ss_pred cEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCC----CceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHH
Q 015014 76 GVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDP----RVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVF 151 (414)
Q Consensus 76 ~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~----~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~ 151 (414)
.|.++-.+..=..-++...-.+.+..+++.+.++. -+-+|.|.-+| ++ .+.+-.. ... ..
T Consensus 69 ~v~v~a~D~tf~GGS~G~~~g~Ki~r~~e~A~~~~~~~~~~PvV~l~dSG-Ga-----RlqEg~~---------~L~-~~ 132 (301)
T PRK07189 69 PVVVAAQEGRFMGGSVGEVHGAKLAGALELAAEDNRNGIPTAVLLLFETG-GV-----RLQEANA---------GLA-AI 132 (301)
T ss_pred EEEEEEECCCccCcCcCHHHHHHHHHHHHHHHHhCCCCCCCCEEEEecCC-Cc-----CccchHH---------HHH-HH
Confidence 35555555555567888888999999998887654 14555555444 22 2222110 000 01
Q ss_pred HHHHHHHHHHhhCCCcEEEEECCc--cccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCc-HHHHH
Q 015014 152 TAEYSLICKISEYKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGG-GSVGA 228 (414)
Q Consensus 152 ~~~~~l~~~l~~~~kPvIAavnG~--a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~-~~~a~ 228 (414)
...+..+..+... +|+|++|-|. |+||+...+..||++|+++++.+++.- ...+-...|. .--..
T Consensus 133 a~i~~~~~~ls~~-VP~I~vv~G~~gc~GG~a~~a~l~D~iIm~~~a~iglaG-----------P~VIe~~~G~e~~d~~ 200 (301)
T PRK07189 133 AEIMRAIVDLRAA-VPVIGLIGGRVGCFGGMGIAAALCSYLIVSEEGRLGLSG-----------PEVIEQEAGVEEFDSR 200 (301)
T ss_pred HHHHHHHHHHhCC-CCEEEEEcCCCCCcHHHHHHHhcCCEEEEECCcEEeccC-----------HHHHHHhcCCcccCHH
Confidence 1112223344445 9999999999 999999999999999999988777521 1111111221 00122
Q ss_pred HHHhcCCCCCcHHHHHHcCccceecCCCC
Q 015014 229 YLGMTGKRISTPSDALFAGLGTDYVPSGN 257 (414)
Q Consensus 229 ~l~ltG~~i~~a~eA~~~GLv~~vv~~~~ 257 (414)
+-.+..+.+. +......|++|.+++++.
T Consensus 201 d~~~vw~~lG-G~h~~~sG~~D~~v~dd~ 228 (301)
T PRK07189 201 DRALVWRTTG-GKHRYLSGLADALVDDDV 228 (301)
T ss_pred HhcccccccC-cceeeecccceEEeCCHH
Confidence 2222222233 334455899999998653
No 129
>PRK05654 acetyl-CoA carboxylase subunit beta; Validated
Probab=97.43 E-value=0.0062 Score=59.51 Aligned_cols=156 Identities=16% Similarity=0.120 Sum_probs=96.1
Q ss_pred cCcEEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHH
Q 015014 74 PNGVAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFT 152 (414)
Q Consensus 74 ~~~V~~Itlnrp~-~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (414)
+|.-..|.-|.|. ..-+++...-+.+.++++.+.+. .+-+|.|.-+| ++ ...+ .. .. +. ...
T Consensus 119 ~G~~V~v~a~D~~f~gGS~g~~~~eKi~r~~e~A~~~-~lPlV~l~dsg-Ga-----rmqE---gi-----~s-L~-~~a 181 (292)
T PRK05654 119 EGMPVVLAVMDFSFMGGSMGSVVGEKIVRAVERAIEE-KCPLVIFSASG-GA-----RMQE---GL-----LS-LM-QMA 181 (292)
T ss_pred CCEEEEEEEEecccccCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-Cc-----chhh---hh-----hH-HH-hHH
Confidence 4433334445554 56789999999999999988775 46677776554 22 2221 00 00 00 111
Q ss_pred HHHHHHHHHhhCCCcEEEEECCccccchhh-hhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHH
Q 015014 153 AEYSLICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLG 231 (414)
Q Consensus 153 ~~~~l~~~l~~~~kPvIAavnG~a~GgG~~-Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ 231 (414)
.....+.++.....|.|+++-|+|.||+.. .++.+|++||.+++.+++--. ..+...+| .++
T Consensus 182 k~~~a~~~~~~a~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGp-----------rvie~~~~-----e~l- 244 (292)
T PRK05654 182 KTSAALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPKALIGFAGP-----------RVIEQTVR-----EKL- 244 (292)
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCCchHHHHHHHHcCCEEEEecCcEEEecCH-----------HHHHhhhh-----hhh-
Confidence 222334456667899999999999999655 467799999998887776222 11111122 111
Q ss_pred hcCCCCCcHHHHHHcCccceecCCCCHHHHHHHH
Q 015014 232 MTGKRISTPSDALFAGLGTDYVPSGNLGSLKEAL 265 (414)
Q Consensus 232 ltG~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l 265 (414)
. +.+.+++-+.+.|+||.|+++.++......+
T Consensus 245 -p-e~~~~ae~~~~~G~vD~Vv~~~e~r~~l~~~ 276 (292)
T PRK05654 245 -P-EGFQRAEFLLEHGAIDMIVHRRELRDTLASL 276 (292)
T ss_pred -h-hhhcCHHHHHhCCCCcEEECHHHHHHHHHHH
Confidence 1 2243377788999999999998876544433
No 130
>TIGR00515 accD acetyl-CoA carboxylase, carboxyl transferase, beta subunit. The enzyme acetyl-CoA carboxylase contains a biotin carboxyl carrier protein or domain, a biotin carboxylase, and a carboxyl transferase. This model represents the beta chain of the carboxyl transferase for cases in which the architecture of the protein is as in E. coli, in which the carboxyltransferase portion consists of two non-identical subnits, alpha and beta.
Probab=97.38 E-value=0.008 Score=58.52 Aligned_cols=153 Identities=17% Similarity=0.161 Sum_probs=95.7
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
|+++..|-.-..-+++....+.+.++++.+.+. .+-+|.|..+| ++ -+.+- ...+. .......
T Consensus 122 V~v~a~D~~f~gGSmg~~~geKi~r~~e~A~~~-~lPlV~l~dSg-Ga-----RmqEg---------~~sL~-~~ak~~~ 184 (285)
T TIGR00515 122 IVVAVFDFAFMGGSMGSVVGEKFVRAIEKALED-NCPLIIFSASG-GA-----RMQEA---------LLSLM-QMAKTSA 184 (285)
T ss_pred EEEEEEeccccCCCccHHHHHHHHHHHHHHHHc-CCCEEEEEcCC-Cc-----ccccc---------hhHHH-hHHHHHH
Confidence 454444444456789999999999999988765 46777776654 33 11110 00011 1111222
Q ss_pred HHHHHhhCCCcEEEEECCccccchhh-hhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCC
Q 015014 157 LICKISEYKKPYISLMDGVTMGFGIG-ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 235 (414)
Q Consensus 157 l~~~l~~~~kPvIAavnG~a~GgG~~-Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~ 235 (414)
.+.++.....|.|+++-|+|.||+.. +++.+|++||.+++.+++--.. .+...+|.. +. +
T Consensus 185 ~~~~~~~~~vP~IsVv~gpt~GG~aas~a~~~D~iia~p~A~ig~aGpr-----------Vie~ti~e~-------lp-e 245 (285)
T TIGR00515 185 ALAKMSERGLPYISVLTDPTTGGVSASFAMLGDLNIAEPKALIGFAGPR-----------VIEQTVREK-------LP-E 245 (285)
T ss_pred HHHHHHcCCCCEEEEEeCCcchHHHHHHHhCCCEEEEECCeEEEcCCHH-----------HHHHHhcCc-------cc-h
Confidence 34456667899999999999998655 5579999999999888762221 122222211 11 3
Q ss_pred CCCcHHHHHHcCccceecCCCCHHHHHHHH
Q 015014 236 RISTPSDALFAGLGTDYVPSGNLGSLKEAL 265 (414)
Q Consensus 236 ~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l 265 (414)
.+.+++-+.+.|+||.||++.++......+
T Consensus 246 ~~q~ae~~~~~G~vD~iv~~~~~r~~l~~~ 275 (285)
T TIGR00515 246 GFQTSEFLLEHGAIDMIVHRPEMKKTLASL 275 (285)
T ss_pred hcCCHHHHHhCCCCcEEECcHHHHHHHHHH
Confidence 343366678899999999998876544433
No 131
>TIGR03134 malonate_gamma malonate decarboxylase, gamma subunit. Members of this protein family are the gamma subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase, while the gamma subunit appears either to mediate subunit interaction or to act as a co-decarboxylase with the beta subunit. The beta and gamma subunits exhibit some local sequence similarity.
Probab=97.30 E-value=0.014 Score=55.48 Aligned_cols=156 Identities=12% Similarity=0.034 Sum_probs=92.5
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHH-hcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHH
Q 015014 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEW-ESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFT 152 (414)
Q Consensus 74 ~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~-~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~ 152 (414)
++.-..|.=|+|.. .++.+-...+...+... +.+...-+|.|.=. ..|-.|..-.+.. ...
T Consensus 30 ~G~~V~vIa~~~~~--~~g~~~~~k~A~~v~~~~d~~f~~PIv~lvDt--pG~~~g~~aE~~G--------------~~~ 91 (238)
T TIGR03134 30 AGGKVTVIGVVPDA--EVGLDEALALAQAVLDVIEADDKRPIVVLVDT--PSQAYGRREELLG--------------INQ 91 (238)
T ss_pred CCEEEEEEEECCCC--cCChHHHHHHHHHHHHHHHhcCCCCEEEEEeC--CCCCCCHHHHHHH--------------HHH
Confidence 34333344455543 68877777777777774 45566666666544 2355554332221 112
Q ss_pred HHHHHHHHH---hhCCCcEEEEECCccccchhhhh-ccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHH
Q 015014 153 AEYSLICKI---SEYKKPYISLMDGVTMGFGIGIS-GHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGA 228 (414)
Q Consensus 153 ~~~~l~~~l---~~~~kPvIAavnG~a~GgG~~La-la~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~ 228 (414)
...++...+ ...+.|+|+.|-|.++|||+.-. +.+|.++|-+++ .++..+.-+++..+-+-.. ...
T Consensus 92 a~A~l~~a~a~a~~~~vP~IsvI~g~a~ggg~lamg~~ad~v~Alp~A-------~i~vm~~e~aa~I~~~~~~---~~~ 161 (238)
T TIGR03134 92 ALAHLAKALALARLAGHPVIGLIYGKAISGAFLAHGLQADRIIALPGA-------MVHVMDLESMARVTKRSVE---ELE 161 (238)
T ss_pred HHHHHHHHHHHhhcCCCCEEEEEeCCccHHHHHHHccCcCeEEEcCCc-------EEEecCHHHHHHHHccCHh---HHH
Confidence 223333444 45669999999999998766444 347776666555 5556665666555544432 444
Q ss_pred HHHhcCC--CCCcHHHHHHcCccceecCCCCH
Q 015014 229 YLGMTGK--RISTPSDALFAGLGTDYVPSGNL 258 (414)
Q Consensus 229 ~l~ltG~--~i~~a~eA~~~GLv~~vv~~~~l 258 (414)
++.-+-. ..+ ...+.+.|+||.|+++.+-
T Consensus 162 e~a~~~~~~a~~-~~~~~~~G~vd~vi~~~~~ 192 (238)
T TIGR03134 162 ALAKSSPVFAPG-IENFVKLGGVHALLDVADA 192 (238)
T ss_pred HHHHhhhhhccC-HHHHHhCCCccEEeCCCCc
Confidence 4433222 344 6789999999999997664
No 132
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=97.30 E-value=0.0068 Score=59.02 Aligned_cols=153 Identities=16% Similarity=0.120 Sum_probs=92.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
|.++.++--=..-++....-+.+.++++.+.+.. +-+|++..+| + +-+.+-. ..... + .....
T Consensus 135 v~v~a~Dftf~gGSmG~v~geKi~ra~e~A~~~r-lPlV~l~~SG-G-----ARmQEg~--------~sL~q-m-ak~sa 197 (296)
T CHL00174 135 VALGVMDFQFMGGSMGSVVGEKITRLIEYATNES-LPLIIVCASG-G-----ARMQEGS--------LSLMQ-M-AKISS 197 (296)
T ss_pred EEEEEECCcccccCcCHHHHHHHHHHHHHHHHcC-CCEEEEECCC-C-----ccccccc--------hhhhh-h-HHHHH
Confidence 5555555444567899999999999999887754 5667776555 2 2222210 00000 1 01101
Q ss_pred HHHH-HhhCCCcEEEEECCccccchhhh-hccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcC
Q 015014 157 LICK-ISEYKKPYISLMDGVTMGFGIGI-SGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTG 234 (414)
Q Consensus 157 l~~~-l~~~~kPvIAavnG~a~GgG~~L-ala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG 234 (414)
.+.. ...-..|.|+++.|+|.||+... ++.||++|+.+++.+++--. ..+...+|.. +.
T Consensus 198 a~~~~~~~~~vP~Isvl~gPt~GG~aas~a~l~Diiiae~~A~IgfAGP-----------rVIe~t~ge~-------lp- 258 (296)
T CHL00174 198 ALYDYQSNKKLFYISILTSPTTGGVTASFGMLGDIIIAEPNAYIAFAGK-----------RVIEQTLNKT-------VP- 258 (296)
T ss_pred HHHHHHHcCCCCEEEEEcCCCchHHHHHHHHcccEEEEeCCeEEEeeCH-----------HHHHHhcCCc-------CC-
Confidence 1122 22467999999999999988877 56699999988877664211 1111122211 22
Q ss_pred CCCCcHHHHHHcCccceecCCCCHHHHHHHH
Q 015014 235 KRISTPSDALFAGLGTDYVPSGNLGSLKEAL 265 (414)
Q Consensus 235 ~~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l 265 (414)
+.+.+|+-.++.|+||.+|+..++......|
T Consensus 259 e~fq~ae~l~~~G~vD~iV~r~~lr~~l~~l 289 (296)
T CHL00174 259 EGSQAAEYLFDKGLFDLIVPRNLLKGVLSEL 289 (296)
T ss_pred cccccHHHHHhCcCceEEEcHHHHHHHHHHH
Confidence 2344477788999999999988876544443
No 133
>PRK12552 ATP-dependent Clp protease-like protein; Reviewed
Probab=97.18 E-value=0.0079 Score=56.35 Aligned_cols=143 Identities=17% Similarity=0.109 Sum_probs=89.4
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceE--EEEEeCCCCCccCC---CChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhC
Q 015014 90 AMNLDMDIKYKSFLDEWESDPRVKC--VLIEGSGPRAFCAG---MDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEY 164 (414)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~v~~--vVl~g~g~~~FcaG---~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 164 (414)
.++.++.+.+...|-.++.++..+- +-|-+.| +..-+| +++.+ ....+..+...
T Consensus 48 ~~~~~~a~~iiaqLl~L~~~~~~k~I~lyINSpG-Gsv~~G~~iG~v~~--------------------glaIyD~m~~i 106 (222)
T PRK12552 48 QVGMDVTELIIAQLLYLEFDDPEKPIYFYINSTG-TSWYTGDAIGFETE--------------------AFAICDTMRYI 106 (222)
T ss_pred chhHhHHHHHHHHHHHHhccCCCCCEEEEEeCCC-CCcccccccccccc--------------------HHHHHHHHHhc
Confidence 3455588888888888865432222 3345655 344444 11111 12344467778
Q ss_pred CCcEEEEECCccccchhhhhccCCe--EEEcCCeeEecccccCCCCCChhHHH-----------------HHhhCCCcH-
Q 015014 165 KKPYISLMDGVTMGFGIGISGHGRY--RIVTEKTLLAMPENGIGLFPDVGFSY-----------------IAAKGPGGG- 224 (414)
Q Consensus 165 ~kPvIAavnG~a~GgG~~Lala~D~--ria~~~a~f~~pe~~~Gl~P~~g~~~-----------------~L~r~~G~~- 224 (414)
+-||...+.|.|.+.|..|++++|- |++.++++|-+.....|.. + ..+- .+.+.-|..
T Consensus 107 k~~V~Tv~~G~AaS~AslIl~aG~kg~R~alpns~iMIHqP~~~~~-G-~A~di~~~a~el~~~r~~l~~iya~~TG~~~ 184 (222)
T PRK12552 107 KPPVHTICIGQAMGTAAMILSAGTKGQRASLPHATIVLHQPRSGAR-G-QATDIQIRAKEVLHNKRTMLEILSRNTGQTV 184 (222)
T ss_pred CCCeEEEEEeehhhHHHHHHhCCCCCceecCCCcEEEeccCCcccc-c-CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
Confidence 8899999999999999999999995 9999999998877654432 1 1111 111111221
Q ss_pred HHHHHHHhcCCCCCcHHHHHHcCccceecCCC
Q 015014 225 SVGAYLGMTGKRISTPSDALFAGLGTDYVPSG 256 (414)
Q Consensus 225 ~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~ 256 (414)
..-.+++-.-.-++ |+||+++||||+|+.+.
T Consensus 185 e~I~~d~~rd~wms-A~EA~eyGliD~Ii~~~ 215 (222)
T PRK12552 185 EKLSKDTDRMFYLT-PQEAKEYGLIDRVLESR 215 (222)
T ss_pred HHHHHHhcCCCcCC-HHHHHHcCCCcEEeccC
Confidence 01122222233477 99999999999999653
No 134
>PF01343 Peptidase_S49: Peptidase family S49 peptidase classification.; InterPro: IPR002142 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S49 (protease IV family, clan S-). The predicted active site serine for members of this family occurs in a transmembrane domain. The domain defines sequences in viruses, archaea, bacteria and plants. These sequences are variously annotated in the different taxonomic groups, examples are: Viruses: capsid protein Archaea: proteinase IV homolog Bacteria: proteinase IV, sohB, SppA, pfaP, putative protease Plants: SppA, protease IV This group also contains proteins classified as non-peptidase homologues that either have been found experimentally to be without peptidase activity, or lack amino acid residues that are believed to be essential for the catalytic activity of peptidases. Related proteins, non-peptidase homologs and unclassified S49 members are also to be found in IPR002810 from INTERPRO.; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3RST_B 3BEZ_D 3BF0_A.
Probab=97.17 E-value=0.00024 Score=62.94 Aligned_cols=99 Identities=12% Similarity=0.069 Sum_probs=59.7
Q ss_pred HhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEeccccc------------CCC---------CCChh-----HH
Q 015014 161 ISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENG------------IGL---------FPDVG-----FS 214 (414)
Q Consensus 161 l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~------------~Gl---------~P~~g-----~~ 214 (414)
+.+..|||||.++|.+..+|.-|+.+||-+++.+.+.++..-+. +|+ .-..+ .+
T Consensus 2 ~~~~~KpV~a~~~~~~~S~~Y~lAs~ad~I~~~p~s~vgsiGv~~~~~~~~~~l~k~GV~~~~~~~g~~K~~~~~~~~~s 81 (154)
T PF01343_consen 2 FKASGKPVVAYAEGYAASGAYYLASAADEIYANPSSSVGSIGVSAERLFFKGLLEKLGVKVEVVRSGEYKSAGFPRDPMS 81 (154)
T ss_dssp HHHTT--EEEEEEEEEETHHHHHHTTSSEEEE-TT-EEE---EEEEEEE-HHHHHHTT-EEEEEESSTTCCCCCTTSS--
T ss_pred ccccCCeEEEEECCcchhHHHHHHHcCCEEEecCCCEEEEeChhhccccHHHHHHHCCCeEEEEecCccccccCcCCCCC
Confidence 34678999999999999999999999999999988866653331 222 11111 10
Q ss_pred H----HHhh-----------CC----CcHHHHHHHHhcCCCCCcHHHHHHcCccceecCCCCHHH
Q 015014 215 Y----IAAK-----------GP----GGGSVGAYLGMTGKRISTPSDALFAGLGTDYVPSGNLGS 260 (414)
Q Consensus 215 ~----~L~r-----------~~----G~~~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~l~~ 260 (414)
- .+.+ .+ |......+-+..|..++ +++|++.||||++-..+++..
T Consensus 82 ~~~r~~~~~~l~~~~~~f~~~Va~~R~~~~~~v~~~~~~~~~~-~~~A~~~GLiD~i~~~~~~~~ 145 (154)
T PF01343_consen 82 EEERENLQELLDELYDQFVNDVAEGRGLSPDDVEEIADGGVFT-AQQALELGLIDEIGTFDEAIA 145 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTS-HHHHHCHHCCHEEE-HHHHHHTTSSSEETSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHhhcccc-HHHHHHcCchhhcCCHHHHHH
Confidence 0 0100 01 11101122367899998 999999999999976555543
No 135
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=97.11 E-value=0.0088 Score=60.78 Aligned_cols=150 Identities=15% Similarity=0.099 Sum_probs=105.6
Q ss_pred cCcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHH
Q 015014 74 PNGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTA 153 (414)
Q Consensus 74 ~~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~ 153 (414)
++.|.+|.++ +++++.+.+.+.+.++.++++.. .+|||.=.-|+. ....
T Consensus 25 ~~~v~vi~i~-----g~I~~~s~~~l~r~l~~A~~~~a-~~vvl~ldTPGG-------------------------l~~s 73 (436)
T COG1030 25 EKKVYVIEID-----GAIDPASADYLQRALQSAEEENA-AAVVLELDTPGG-------------------------LLDS 73 (436)
T ss_pred CCeEEEEEec-----CccCHHHHHHHHHHHHHHHhCCC-cEEEEEecCCCc-------------------------hHHH
Confidence 4567888887 77999999999999999998763 444444322321 1223
Q ss_pred HHHHHHHHhhCCCcEEEEE---CCccccchhhhhccCCeEEEcCCeeEeccccc-CC-CCCC-hh-HHHH------HhhC
Q 015014 154 EYSLICKISEYKKPYISLM---DGVTMGFGIGISGHGRYRIVTEKTLLAMPENG-IG-LFPD-VG-FSYI------AAKG 220 (414)
Q Consensus 154 ~~~l~~~l~~~~kPvIAav---nG~a~GgG~~Lala~D~ria~~~a~f~~pe~~-~G-l~P~-~g-~~~~------L~r~ 220 (414)
+.++..++.+.+.|||..| .+.|..+|.-++++||+..|++.+.++--..- .| -.+. .. .... +++.
T Consensus 74 m~~iv~~i~~s~vPV~~yv~p~ga~AaSAGtyI~m~~hiaaMAPgT~iGaa~Pi~~~g~~~~~~~~~n~~~ay~~~~A~~ 153 (436)
T COG1030 74 MRQIVRAILNSPVPVIGYVVPDGARAASAGTYILMATHIAAMAPGTNIGAATPIAGGGTSAKEANTTNAAVAYIRSLAEE 153 (436)
T ss_pred HHHHHHHHHcCCCCEEEEEcCCCcchhchhhHHHHhcChhhhCCCCcccccceecCCCCCccchhhHHHHHHHHHHHHHH
Confidence 4467778999999988888 34699999999999999999999988864433 33 1111 11 1121 2333
Q ss_pred CCcH-HHHHHHHhcCCCCCcHHHHHHcCccceecCC
Q 015014 221 PGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 221 ~G~~-~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~ 255 (414)
-|+. ..+.+++-....++ ++||++.|++|-+..+
T Consensus 154 ~gRN~~~ae~~v~~~~~l~-a~eA~~~~vid~iA~~ 188 (436)
T COG1030 154 RGRNPTWAERFVTENLSLT-AEEALRQGVIDLIARD 188 (436)
T ss_pred cCCChHHHHHHhhhccCCC-hhHHHhcCccccccCC
Confidence 3431 15677888888999 9999999999988653
No 136
>TIGR00705 SppA_67K signal peptide peptidase SppA, 67K type. E. coli SohB, which is most closely homologous to the C-terminal duplication of SppA, is predicted to perform a similar function of small peptide degradation, but in the periplasm. Many prokaryotes have a single SppA/SohB homolog that may perform the function of either or both.
Probab=97.10 E-value=0.0068 Score=65.04 Aligned_cols=84 Identities=12% Similarity=0.086 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECC
Q 015014 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDG 174 (414)
Q Consensus 95 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG 174 (414)
.+.++.++|+.+.+|+.|++|||.-.+ +.|+++..+. ..++.+..+....|||||..++
T Consensus 77 ~l~~i~~~i~~A~~D~~IkgIvL~i~~----~~g~~~~~~~-----------------ei~~ai~~fk~sgKpVvA~~~~ 135 (584)
T TIGR00705 77 SLFDIVNAIRQAADDRRIEGLVFDLSN----FSGWDSPHLV-----------------EIGSALSEFKDSGKPVYAYGTN 135 (584)
T ss_pred CHHHHHHHHHHHhcCCCceEEEEEccC----CCCCCHHHHH-----------------HHHHHHHHHHhcCCeEEEEEcc
Confidence 567899999999999999999998653 1233433221 2223444566678999999988
Q ss_pred ccccchhhhhccCCeEEEcCCeeEec
Q 015014 175 VTMGFGIGISGHGRYRIVTEKTLLAM 200 (414)
Q Consensus 175 ~a~GgG~~Lala~D~ria~~~a~f~~ 200 (414)
++ -+|.-|+.+||-+++.+...+++
T Consensus 136 ~~-s~~YylAs~AD~I~~~p~G~v~~ 160 (584)
T TIGR00705 136 YS-QGQYYLASFADEIILNPMGSVDL 160 (584)
T ss_pred cc-chhhhhhhhCCEEEECCCceEEe
Confidence 76 67899999999999999877644
No 137
>COG0740 ClpP Protease subunit of ATP-dependent Clp proteases [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=96.75 E-value=0.026 Score=51.85 Aligned_cols=98 Identities=14% Similarity=0.044 Sum_probs=65.4
Q ss_pred HHHHhhCCCcEEEEECCccccchhhhhccCCeE--EEcCCeeEecccccCCCCCChhHHH----------------HHhh
Q 015014 158 ICKISEYKKPYISLMDGVTMGFGIGISGHGRYR--IVTEKTLLAMPENGIGLFPDVGFSY----------------IAAK 219 (414)
Q Consensus 158 ~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~r--ia~~~a~f~~pe~~~Gl~P~~g~~~----------------~L~r 219 (414)
+..+...+.||...+-|.|...|.-|++++|.. ++.+++++-+.... |.+-+...=. .+..
T Consensus 78 ydtm~~ik~~V~ti~~G~AaSmgs~l~~aG~~g~r~~lPnsrimIHqP~-gg~~G~a~Di~i~A~ei~~~~~~l~~i~a~ 156 (200)
T COG0740 78 YDTMQFIKPPVSTICMGQAASMGSVLLMAGDKGKRFALPNARIMIHQPS-GGAQGQASDIEIHAREILKIKERLNRIYAE 156 (200)
T ss_pred HHHHHhcCCCeEEEEecHHHhHHHHHHhcCCCCCceeCCCceEEEecCC-ccCccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 346777899999999999999999999999985 88888888766655 4332211100 1111
Q ss_pred CCCcH-HHHHHHHhcCCCCCcHHHHHHcCccceecCCCC
Q 015014 220 GPGGG-SVGAYLGMTGKRISTPSDALFAGLGTDYVPSGN 257 (414)
Q Consensus 220 ~~G~~-~~a~~l~ltG~~i~~a~eA~~~GLv~~vv~~~~ 257 (414)
.-|.. ..-...+-....++ |+||+++||+|+|+...+
T Consensus 157 ~TGq~~e~i~~d~drd~~ms-a~eA~~yGLiD~V~~~~~ 194 (200)
T COG0740 157 HTGQTLEKIEKDTDRDTWMS-AEEAKEYGLIDKVIESRE 194 (200)
T ss_pred HcCCCHHHHHHhhcccccCC-HHHHHHcCCcceeccccc
Confidence 22322 01112223334577 999999999999997654
No 138
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=96.74 E-value=0.054 Score=57.18 Aligned_cols=155 Identities=14% Similarity=0.146 Sum_probs=96.2
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHH
Q 015014 80 ITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLI 158 (414)
Q Consensus 80 Itlnrp~-~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (414)
|.=|+|. ..-+++..-.+...+.++.+++. .+-+|.|.-.+ .|..|.+-.. ........+++
T Consensus 319 vvAnd~~~~~G~~~~~~~~K~~r~i~~a~~~-~lPlV~lvDs~--G~~~g~~~E~--------------~g~~~~~a~~~ 381 (512)
T TIGR01117 319 IIANQPKVMAGCLDIDSSDKIARFIRFCDAF-NIPIVTFVDVP--GFLPGVNQEY--------------GGIIRHGAKVL 381 (512)
T ss_pred EEEeccccccCCCCHHHHHHHHHHHHHHHHc-CCCEEEEEeCc--CccccHHHHH--------------HHHHHHHHHHH
Confidence 3345554 34579999999999999987764 46666666553 2665544221 11333445677
Q ss_pred HHHhhCCCcEEEEECCccccchhhhhcc-----CCeEEEcCCeeEecccccCCCCCChhHHHHHh-hCCC---cHHH--H
Q 015014 159 CKISEYKKPYISLMDGVTMGFGIGISGH-----GRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA-KGPG---GGSV--G 227 (414)
Q Consensus 159 ~~l~~~~kPvIAavnG~a~GgG~~Lala-----~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~-r~~G---~~~~--a 227 (414)
.++....+|.|+.|-|.+.|||. ++++ +|+++|.+++.++ +.++-++...+- +.+. .... .
T Consensus 382 ~a~~~~~vP~isvi~g~~~Gga~-~am~~~~~~~d~~~a~p~a~~~-------v~~pe~a~~i~~~~~l~~~~~~~~~~~ 453 (512)
T TIGR01117 382 YAYSEATVPKVTIITRKAYGGAY-LAMCSKHLGADQVYAWPTAEIA-------VMGPAGAANIIFRKDIKEAKDPAATRK 453 (512)
T ss_pred HHHHhCCCCEEEEEcCCCchHHH-HHhccccCCCCEEEEcCCCeEe-------ecCHHHHHHHHhhhhcccccCHHHHHH
Confidence 78888999999999999988754 4443 8888877776655 443333333332 2111 0001 1
Q ss_pred HHHH-hcCCCCCcHHHHHHcCccceecCCCCHHH
Q 015014 228 AYLG-MTGKRISTPSDALFAGLGTDYVPSGNLGS 260 (414)
Q Consensus 228 ~~l~-ltG~~i~~a~eA~~~GLv~~vv~~~~l~~ 260 (414)
..+. +.-+..+ +..+.+.|+||.|+++.++..
T Consensus 454 ~~~~~~~~~~~~-~~~~a~~g~vD~VI~P~~tR~ 486 (512)
T TIGR01117 454 QKIAEYREEFAN-PYKAAARGYVDDVIEPKQTRP 486 (512)
T ss_pred HHHHHHHHhhcC-HHHHHhcCCCCeeEChHHHHH
Confidence 1111 1122345 888999999999999987754
No 139
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=95.84 E-value=0.2 Score=53.47 Aligned_cols=110 Identities=13% Similarity=0.051 Sum_probs=69.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
|.++--+.-=+.-+++....+.+.++++.+.+.. +-+|.|.-+| +++-.+ ....+ .... .+...+.
T Consensus 131 V~v~a~D~tv~GGs~g~~~~~Ki~r~~elA~~~~-lPlV~l~DSg-Garl~~-q~e~~----------~~~~-~~g~if~ 196 (569)
T PLN02820 131 CMFVANDPTVKGGTYYPITVKKHLRAQEIAAQCR-LPCIYLVDSG-GANLPR-QAEVF----------PDRD-HFGRIFY 196 (569)
T ss_pred EEEEEECCCccCCCCCHHHHHHHHHHHHHHHHcC-CCEEEEEeCC-CcCCcc-ccccc----------chHh-HHHHHHH
Confidence 4444444333567899999999999999887754 5566665444 343211 00000 0000 1111222
Q ss_pred HHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC-eeEec
Q 015014 157 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAM 200 (414)
Q Consensus 157 l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~ 200 (414)
....+....+|.|++|-|.|.|||.-....||++|++++ +.+.+
T Consensus 197 ~~~~ls~~~VP~Isvv~G~~~gGgAy~~a~~D~vim~~~~a~i~~ 241 (569)
T PLN02820 197 NQARMSSAGIPQIALVLGSCTAGGAYVPAMADESVIVKGNGTIFL 241 (569)
T ss_pred HHHHHhCCCCCEEEEEeCCCChHHHHHHHhCCceEEecCCcEEEe
Confidence 223455667999999999999999999999999999875 54443
No 140
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=95.73 E-value=0.097 Score=55.15 Aligned_cols=141 Identities=18% Similarity=0.173 Sum_probs=91.3
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
|.++..+.--...++.....+.+..+++.+.++. +-+|.|.-+| ++| + ++.+-.... . .....+.
T Consensus 59 v~v~a~D~t~~gGs~g~~~~~Ki~ra~~~A~~~~-~P~v~l~dsg-Ga~--~-r~~eg~~~l---------~-~~g~i~~ 123 (493)
T PF01039_consen 59 VVVIAQDFTVLGGSVGEVHGEKIARAIELALENG-LPLVYLVDSG-GAF--L-RMQEGVESL---------M-GMGRIFR 123 (493)
T ss_dssp EEEEEEETTSGGGTBSHHHHHHHHHHHHHHHHHT-EEEEEEEEES-SBC--G-GGGGHHHHH---------H-HHHHHHH
T ss_pred EEEEEeccceecCCCCcccceeeehHHHHHHHcC-CCcEEecccc-ccc--c-ccchhhhhh---------h-hhHHHHH
Confidence 4444444444567899999999999999888765 4455554333 221 1 444433211 0 1122233
Q ss_pred HHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCC-eeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCC
Q 015014 157 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEK-TLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 235 (414)
Q Consensus 157 l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~-a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~ 235 (414)
....+.. ..|+|+++.|.|.|||.-++..||++|+.++ +.+++. |+. ..+ ..+|+
T Consensus 124 ~~~~~~~-~iP~I~vv~G~~~Gg~A~~~~~~d~~i~~~~~a~i~l~--------------------GP~--vv~-~~~Ge 179 (493)
T PF01039_consen 124 AIARLSG-GIPQISVVTGPCTGGGAYLAALSDFVIMVKGTARIFLA--------------------GPR--VVE-SATGE 179 (493)
T ss_dssp HHHHHHT-TS-EEEEEESEEEGGGGHHHHHSSEEEEETTTCEEESS--------------------THH--HHH-HHHSS
T ss_pred HHHHHhc-CCCeEEEEccccccchhhcccccCccccCccceEEEec--------------------ccc--ccc-cccCc
Confidence 3445566 9999999999999999999999999999997 776532 211 122 24567
Q ss_pred CCCcHHHH-------HHcCccceecCCCC
Q 015014 236 RISTPSDA-------LFAGLGTDYVPSGN 257 (414)
Q Consensus 236 ~i~~a~eA-------~~~GLv~~vv~~~~ 257 (414)
.++ .++. ...|.+|.++++++
T Consensus 180 ~~~-~~~lgG~~~h~~~sG~~d~v~~de~ 207 (493)
T PF01039_consen 180 EVD-SEELGGADVHAAKSGVVDYVVDDEE 207 (493)
T ss_dssp CTS-HHHHHBHHHHHHTSSSSSEEESSHH
T ss_pred ccc-chhhhhhhhhcccCCCceEEEechH
Confidence 777 5543 47899999998753
No 141
>TIGR01117 mmdA methylmalonyl-CoA decarboxylase alpha subunit. This model describes methymalonyl-CoA decarboxylase aplha subunit in archaea and bacteria. Metylmalonyl-CoA decarboxylase Na+ pump is a representative of a class of Na+ transport decarboxylases that couples the energy derived by decarboxylation of carboxylic acid substrates to drive the extrusion of Na+ ion across the membrane.
Probab=95.67 E-value=0.13 Score=54.47 Aligned_cols=106 Identities=16% Similarity=0.068 Sum_probs=64.6
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
|.++..+..=..-++.....+.+..+++.+.+.. +-+|.|.-+| ++ .+.+-.. .+..+ ...+.
T Consensus 84 v~v~a~D~t~~gGS~g~~~~~K~~r~~e~A~~~~-lPlV~l~dSg-Ga-----rm~eg~~---------~l~~~-~~~~~ 146 (512)
T TIGR01117 84 VYAFAQDFTVMGGSLGEMHAAKIVKIMDLAMKMG-APVVGLNDSG-GA-----RIQEAVD---------ALKGY-GDIFY 146 (512)
T ss_pred EEEEEECCcccccCCCHHHHHHHHHHHHHHHHcC-CCEEEEecCC-CC-----Cccccch---------hhhhH-HHHHH
Confidence 4444444333567888888999999999887765 4455554433 23 2221000 00001 11111
Q ss_pred HHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCe-eEec
Q 015014 157 LICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT-LLAM 200 (414)
Q Consensus 157 l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a-~f~~ 200 (414)
.. ....-..|+|+++-|.|.||+......|||+|+.+++ .+++
T Consensus 147 ~~-~~~s~~iP~Isvv~G~~~GG~a~~~al~D~vim~~~~a~i~~ 190 (512)
T TIGR01117 147 RN-TIASGVVPQISAIMGPCAGGAVYSPALTDFIYMVDNTSQMFI 190 (512)
T ss_pred HH-HHHcCCCcEEEEEecCCCcHHHHHHHhcCceEEeccceEEEe
Confidence 11 1223458999999999999998888899999999964 3443
No 142
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=95.55 E-value=0.02 Score=55.09 Aligned_cols=88 Identities=18% Similarity=0.158 Sum_probs=65.6
Q ss_pred HHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCC
Q 015014 156 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 235 (414)
Q Consensus 156 ~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~ 235 (414)
.-...+.++++|+||.|=|---+||.--...+|.+.+-++++|+. +.|.+.++. |-+=. +++.+. -...
T Consensus 179 ~nL~em~~LkvPiI~iVIGEGgSGGALAi~vad~V~mle~s~ySV------isPEG~AsI-LWkD~---~ka~eA-Ae~m 247 (317)
T COG0825 179 RNLREMARLKVPIISIVIGEGGSGGALAIGVADRVLMLENSTYSV------ISPEGCASI-LWKDA---SKAKEA-AEAM 247 (317)
T ss_pred HHHHHHhCCCCCEEEEEecCCCchhhHHhhHHHHHHHHHhceeee------cChhhhhhh-hhcCh---hhhHHH-HHHc
Confidence 344568889999999999988777765556799999999999984 445555544 43332 245544 3456
Q ss_pred CCCcHHHHHHcCccceecCC
Q 015014 236 RISTPSDALFAGLGTDYVPS 255 (414)
Q Consensus 236 ~i~~a~eA~~~GLv~~vv~~ 255 (414)
.|+ |++.+++||||.|+|.
T Consensus 248 kit-a~dLk~lgiID~II~E 266 (317)
T COG0825 248 KIT-AHDLKELGIIDGIIPE 266 (317)
T ss_pred CCC-HHHHHhCCCcceeccC
Confidence 899 9999999999999974
No 143
>COG0777 AccD Acetyl-CoA carboxylase beta subunit [Lipid metabolism]
Probab=95.42 E-value=0.71 Score=44.28 Aligned_cols=151 Identities=19% Similarity=0.137 Sum_probs=95.0
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYS 156 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (414)
|+...++--=-.-+|..-.=+.+..+++.+-.+. +.+|+++.+|+ +-..| .. .+.. .......
T Consensus 124 vv~av~df~FmgGSmGsVvGeki~ra~E~A~e~k-~P~v~f~aSGG------ARMQE---g~-----lSLM--QMaktsa 186 (294)
T COG0777 124 VVLAVMDFAFMGGSMGSVVGEKITRAIERAIEDK-LPLVLFSASGG------ARMQE---GI-----LSLM--QMAKTSA 186 (294)
T ss_pred EEEEEEeccccccchhHHHHHHHHHHHHHHHHhC-CCEEEEecCcc------hhHhH---HH-----HHHH--HHHHHHH
Confidence 5555555444446788888888999998887654 78999988872 22221 10 0000 1111223
Q ss_pred HHHHHhhCCCcEEEEECCccccc-hhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhCCCcHHHHHHHHhcCC
Q 015014 157 LICKISEYKKPYISLMDGVTMGF-GIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKGPGGGSVGAYLGMTGK 235 (414)
Q Consensus 157 l~~~l~~~~kPvIAavnG~a~Gg-G~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~~G~~~~a~~l~ltG~ 235 (414)
.+..+.....|+|+.+..++.|| -..+++..|+.||-++|.++|.-. |++- + ...+-+--|
T Consensus 187 Al~~l~ea~lpyIsVLt~PTtGGVsASfA~lGDi~iAEP~AlIGFAGp---------------RVIE-Q-Tire~LPeg- 248 (294)
T COG0777 187 ALKRLSEAGLPYISVLTDPTTGGVSASFAMLGDIIIAEPGALIGFAGP---------------RVIE-Q-TIREKLPEG- 248 (294)
T ss_pred HHHHHHhcCCceEEEecCCCccchhHhHHhccCeeecCcccccccCcc---------------hhhh-h-hhcccCCcc-
Confidence 45567788999999999999876 356778899998887776665322 2221 1 112222222
Q ss_pred CCCcHHHHHHcCccceecCCCCHHHHHH
Q 015014 236 RISTPSDALFAGLGTDYVPSGNLGSLKE 263 (414)
Q Consensus 236 ~i~~a~eA~~~GLv~~vv~~~~l~~~~~ 263 (414)
+..++-.++.|+||.||+..++.....
T Consensus 249 -fQ~aEfLlehG~iD~iv~R~elr~tla 275 (294)
T COG0777 249 -FQTAEFLLEHGMIDMIVHRDELRTTLA 275 (294)
T ss_pred -hhhHHHHHHcCCceeeecHHHHHHHHH
Confidence 323788889999999999877754333
No 144
>PRK10949 protease 4; Provisional
Probab=94.88 E-value=0.16 Score=54.90 Aligned_cols=84 Identities=7% Similarity=0.064 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECC
Q 015014 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDG 174 (414)
Q Consensus 95 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG 174 (414)
.+.++.++|+.+..||.|++|||.-.+++ |..+..+ ....+.+..+....|||||..+.
T Consensus 96 ~l~div~~i~~Aa~D~rIkgivL~i~s~g----G~~~a~~-----------------~eI~~ai~~fk~sGKpVvA~~~~ 154 (618)
T PRK10949 96 SLFDIVNTIRQAKDDRNITGIVLDLKNFA----GADQPSM-----------------QYIGKALREFRDSGKPVYAVGDS 154 (618)
T ss_pred cHHHHHHHHHHHhcCCCceEEEEEeCCCC----CccHHHH-----------------HHHHHHHHHHHHhCCeEEEEecC
Confidence 45688999999999999999999876421 2222111 11223344566778999996555
Q ss_pred ccccchhhhhccCCeEEEcCCeeEec
Q 015014 175 VTMGFGIGISGHGRYRIVTEKTLLAM 200 (414)
Q Consensus 175 ~a~GgG~~Lala~D~ria~~~a~f~~ 200 (414)
++ -+|.-||.+||-+++.+...+++
T Consensus 155 ~~-s~~YyLASaAD~I~l~P~G~v~~ 179 (618)
T PRK10949 155 YS-QGQYYLASFANKIYLSPQGVVDL 179 (618)
T ss_pred cc-chhhhhhhhCCEEEECCCceEEE
Confidence 54 57899999999999999876654
No 145
>PLN02820 3-methylcrotonyl-CoA carboxylase, beta chain
Probab=91.49 E-value=6.7 Score=42.12 Aligned_cols=146 Identities=12% Similarity=0.137 Sum_probs=91.3
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcE
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPY 168 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPv 168 (414)
-+++.+-.+...+.++..+. -++-+|-|.-. ..|-.|.+-.. .-..+...+++.++....+|.
T Consensus 380 g~l~~~~a~Kaarfi~lc~~-~~iPlv~l~D~--pGf~~G~~~E~--------------~G~~~~~a~l~~A~a~~~VP~ 442 (569)
T PLN02820 380 GILFTESALKGAHFIELCAQ-RGIPLLFLQNI--TGFMVGSRSEA--------------SGIAKAGAKMVMAVACAKVPK 442 (569)
T ss_pred CccCHHHHHHHHHHHHHHHh-cCCCEEEEEEC--CCCCCCHHHHH--------------hhHHHHHHHHHHHHHhCCCCE
Confidence 45788888888888887765 45777777654 24777655432 113445567888899999999
Q ss_pred EEEECCccccchhhhhc----cCCeEEEcCCeeEecccccCCCCCChhHHHHHhhC-C------C----cHHHH---HHH
Q 015014 169 ISLMDGVTMGFGIGISG----HGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P------G----GGSVG---AYL 230 (414)
Q Consensus 169 IAavnG~a~GgG~~Lal----a~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~-~------G----~~~~a---~~l 230 (414)
|++|=|.+.|+|..-.. ..|++++. |...+|..++-|+...+-+. + | ..... .++
T Consensus 443 isvi~g~a~G~g~~aM~g~~~~~d~~~aw-------p~A~i~vmg~e~aa~il~~~e~~~~~~~~~~~~~~~~~~~~~~~ 515 (569)
T PLN02820 443 ITIIVGGSFGAGNYGMCGRAYSPNFLFMW-------PNARIGVMGGAQAAGVLAQIERENKKRQGIQWSKEEEEAFKAKT 515 (569)
T ss_pred EEEEECCcchHHHHHhcCcCCCCCEEEEC-------CCCeEEecCHHHHHHHHHHHHhhhhhhccccCCccHHHHHHHHH
Confidence 99999999997665443 44555555 55555666656655555331 1 0 00000 001
Q ss_pred -HhcCCCCCcHHHHHHcCccceecCCCCHH
Q 015014 231 -GMTGKRISTPSDALFAGLGTDYVPSGNLG 259 (414)
Q Consensus 231 -~ltG~~i~~a~eA~~~GLv~~vv~~~~l~ 259 (414)
-..-+..+ +-.|-..|++|.|+++.+..
T Consensus 516 ~~~~~~~~~-p~~aa~~~~vD~VIdP~dTR 544 (569)
T PLN02820 516 VEAYEREAN-PYYSTARLWDDGVIDPADTR 544 (569)
T ss_pred HHHHHHhCC-HHHHHHcCCcCcccCHHHHH
Confidence 11122345 66788899999999887653
No 146
>PLN02157 3-hydroxyisobutyryl-CoA hydrolase-like protein
Probab=91.15 E-value=0.41 Score=49.06 Aligned_cols=65 Identities=9% Similarity=-0.008 Sum_probs=49.1
Q ss_pred HHHHHHhccChhHHHHHHHHHHHHHhhcCCCCcccCCHHHHHHHHHHHHHHhCCCchHHHHHHhhHhC-CCCCCCC
Q 015014 336 EALQGMGKGAPFSLCLTQKYFSKVASAHGKTDNELSKLSGVMKYEYRVALRSSLRSDFAEGVRAVLVD-KDQVLSQ 410 (414)
Q Consensus 336 ~~~~~l~~~sp~al~~tk~~l~~~~~~~~~~~~~~~~l~~~l~~e~~~~~~~~~~~D~~eGv~afl~d-k~~~P~~ 410 (414)
+.+++|+..+|.+++.+|+.++... ..+...+..|......++.++|+.|++.+|..+ .++.|.|
T Consensus 228 ~~~~~i~~~~p~av~~~k~~~~~~~----------~~~~~~l~~~~~~i~~~f~~~d~~ei~~al~~~~~kr~~~w 293 (401)
T PLN02157 228 EQLKKLLTDDPSVVESCLEKCAEVA----------HPEKTGVIRRIDLLEKCFSHDTVEEIIDSLEIEAGRRKDTW 293 (401)
T ss_pred HHHHHHHcCCHHHHHHHHHHHhccc----------CCcchhHHHHHHHHHHHhcCCCHHHHHHHHHhhhcccchHH
Confidence 4555788899999999999987532 234566777888888899999999999999421 3345665
No 147
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=91.03 E-value=0.98 Score=47.48 Aligned_cols=101 Identities=16% Similarity=0.050 Sum_probs=65.0
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHH
Q 015014 78 AVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSL 157 (414)
Q Consensus 78 ~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l 157 (414)
.++-=+.+-+.-++..--.+.+..+.+.+.++....+.+..|.| +.+.+-. .... .+...+..
T Consensus 94 ~v~a~D~TV~gGt~~~~~~~Ki~r~~~~A~~~g~P~i~l~dsgG-------ari~~~v---------~~l~-g~g~iF~~ 156 (526)
T COG4799 94 FVFANDFTVKGGTLGEMTAKKILRAQELAIENGLPVIGLNDSGG-------ARIQEGV---------PSLA-GYGRIFYR 156 (526)
T ss_pred EEEEecCceecccccccccchHHHHHHHHHHcCCCEEEEEcccc-------cccccCc---------cccc-cchHHHHH
Confidence 33333445566778877778888888877776554454555543 2332211 0111 11222223
Q ss_pred HHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCe
Q 015014 158 ICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKT 196 (414)
Q Consensus 158 ~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a 196 (414)
...+... .|.|++|-|.|.|||.-+...||++|+.++.
T Consensus 157 ~a~~Sg~-IPqIsvv~G~c~gGgaY~pal~D~~imv~~~ 194 (526)
T COG4799 157 NARASGV-IPQISVVMGPCAGGGAYSPALTDFVIMVRDQ 194 (526)
T ss_pred HHHhccC-CCEEEEEEecCcccccccccccceEEEEcCC
Confidence 3345555 9999999999999999999999999999985
No 148
>PF01039 Carboxyl_trans: Carboxyl transferase domain; InterPro: IPR000022 Members in this domain include biotin dependent carboxylases [, ]. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognised types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxo acid as the acceptor molecule of carbon dioxide. All of the members in this family utilise acyl-CoA as the acceptor molecule.; GO: 0016874 ligase activity; PDB: 2F9Y_B 1XO6_B 1XNV_B 3MFM_C 3IBB_A 1XNW_F 3IAV_B 1XNY_A 3IB9_A 3U9S_F ....
Probab=81.71 E-value=5.8 Score=41.87 Aligned_cols=156 Identities=16% Similarity=0.171 Sum_probs=89.5
Q ss_pred EEEcCCCCCC-CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHH
Q 015014 80 ITLDRPKALN-AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLI 158 (414)
Q Consensus 80 Itlnrp~~~N-al~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (414)
|.=|+|.... +++.+-.....+.++.++. -++-+|.|.-. ..|-.|-+-.. ........+++
T Consensus 298 iian~~~~~~G~~~~~~a~K~arfi~lcd~-~~iPlv~l~dt--pGf~~g~~~E~--------------~g~~~~ga~~~ 360 (493)
T PF01039_consen 298 IIANNPRQRAGALDPDGARKAARFIRLCDA-FNIPLVTLVDT--PGFMPGPEAER--------------AGIIRAGARLL 360 (493)
T ss_dssp EEEE-TTCGGGEB-HHHHHHHHHHHHHHHH-TT--EEEEEEE--CEB--SHHHHH--------------TTHHHHHHHHH
T ss_pred EEEeccccccccCChHHHHHHHHHHHHHHh-hCCceEEEeec--ccccccchhhh--------------cchHHHHHHHH
Confidence 4445665322 7999999999999988876 45777777654 34665533221 11344556788
Q ss_pred HHHhhCCCcEEEEECCccccchhhhhccC----CeEEEcCCeeEecccccCCCCCChhHHHHHhhC-C------C--cHH
Q 015014 159 CKISEYKKPYISLMDGVTMGFGIGISGHG----RYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-P------G--GGS 225 (414)
Q Consensus 159 ~~l~~~~kPvIAavnG~a~GgG~~Lala~----D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~-~------G--~~~ 225 (414)
.++..+..|.|..|-|.+.|||..-.... |+++|.+++. +|..++-|+...+-+. . | ...
T Consensus 361 ~a~~~~~vP~itvi~~~~~Gga~~am~~~~~~~~~~~Awp~a~-------~~vm~~e~a~~i~~~~~~~~~~~~~~~~~~ 433 (493)
T PF01039_consen 361 YALAEATVPKITVIVRKAYGGAYYAMCGRGYGPDFVFAWPTAE-------IGVMGPEGAASILYRDELEAAEAEGADPEA 433 (493)
T ss_dssp HHHHHH-S-EEEEEEEEEEHHHHHHTTGGGGTTSEEEEETT-E-------EESS-HHHHHHHHTHHHHHHSCHCCHSHHH
T ss_pred HHHHcCCCCEEEEEeCCccCcchhhhcccccchhhhhhhhcce-------eeecChhhhheeeehhhhhhhhcccchhHH
Confidence 89999999999999999999776444333 5665555555 4555545554433211 0 0 000
Q ss_pred -HHHHHHhcCCC-CCcHHHHHHcCccceecCCCCHHH
Q 015014 226 -VGAYLGMTGKR-ISTPSDALFAGLGTDYVPSGNLGS 260 (414)
Q Consensus 226 -~a~~l~ltG~~-i~~a~eA~~~GLv~~vv~~~~l~~ 260 (414)
....+--.-+. .+ +..+...|++|.++++.+...
T Consensus 434 ~~~~~~~~~~~~~~~-~~~~a~~~~~D~ii~p~~tR~ 469 (493)
T PF01039_consen 434 QRAEKIAEYEDELSS-PYRAASRGYVDDIIDPAETRK 469 (493)
T ss_dssp HHHHHHHHHHHHHSS-HHHHHHTTSSSEESSGGGHHH
T ss_pred HHHHHHHHHHHhcCC-HHHHHhcCCCCCccCHHHHHH
Confidence 01111111112 45 888999999999999987653
No 149
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=79.67 E-value=5.9 Score=38.41 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=33.8
Q ss_pred HHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 015014 100 KSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTM 177 (414)
Q Consensus 100 ~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~ 177 (414)
.++|+.+++||..++||+-|.= |++-.+.. .+++.. ...+|||||.+-|.+.
T Consensus 189 id~L~~fe~Dp~T~~ivmiGEi------GG~aEe~A-------------------A~~i~~-~~~~KPVVa~iaG~ta 240 (293)
T COG0074 189 IDALEMFEADPETEAIVMIGEI------GGPAEEEA-------------------AEYIKA-NATRKPVVAYIAGRTA 240 (293)
T ss_pred HHHHHHHhcCccccEEEEEecC------CCcHHHHH-------------------HHHHHH-hccCCCEEEEEeccCC
Confidence 3678888999999999999872 11211111 122223 2345999999999876
No 150
>PF02601 Exonuc_VII_L: Exonuclease VII, large subunit; InterPro: IPR020579 Exonuclease VII 3.1.11.6 from EC is composed of two nonidentical subunits; one large subunit and 4 small ones []. Exonuclease VII catalyses exonucleolytic cleavage in either 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. The large subunit also contains the OB-fold domains (IPR004365 from INTERPRO) that bind to nucleic acids at the N terminus. This entry represents Exonuclease VII, large subunit, C-terminal. ; GO: 0008855 exodeoxyribonuclease VII activity
Probab=79.02 E-value=3.7 Score=40.58 Aligned_cols=79 Identities=19% Similarity=0.164 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHhcCC---CceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEE
Q 015014 94 DMDIKYKSFLDEWESDP---RVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYIS 170 (414)
Q Consensus 94 ~m~~eL~~~l~~~~~d~---~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIA 170 (414)
....++..+|+.++..+ .+-+|||. .||++ +.++.. | ....+..+|..++.|||+
T Consensus 55 ~A~~~I~~al~~~~~~~~~~~~Dviii~-RGGGs------~eDL~~--------------F-N~e~varai~~~~~Pvis 112 (319)
T PF02601_consen 55 GAAASIVSALRKANEMGQADDFDVIIII-RGGGS------IEDLWA--------------F-NDEEVARAIAASPIPVIS 112 (319)
T ss_pred chHHHHHHHHHHHHhccccccccEEEEe-cCCCC------hHHhcc--------------c-ChHHHHHHHHhCCCCEEE
Confidence 44678888888887654 57777773 33222 222221 1 113577799999999999
Q ss_pred EECCccccchhhhh-ccCCeEEEcCCee
Q 015014 171 LMDGVTMGFGIGIS-GHGRYRIVTEKTL 197 (414)
Q Consensus 171 avnG~a~GgG~~La-la~D~ria~~~a~ 197 (414)
+| ||-.- ..|+ +.||+|..|+++-
T Consensus 113 aI-GHe~D--~ti~D~vAd~ra~TPtaa 137 (319)
T PF02601_consen 113 AI-GHETD--FTIADFVADLRAPTPTAA 137 (319)
T ss_pred ec-CCCCC--chHHHHHHHhhCCCHHHH
Confidence 98 55432 2333 6788888777543
No 151
>TIGR00237 xseA exodeoxyribonuclease VII, large subunit. This family consist of exodeoxyribonuclease VII, large subunit XseA which catalyses exonucleolytic cleavage in either the 5'-3' or 3'-5' direction to yield 5'-phosphomononucleotides. Exonuclease VII consists of one large subunit and four small subunits.
Probab=77.67 E-value=3.9 Score=42.37 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEE
Q 015014 93 LDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLM 172 (414)
Q Consensus 93 ~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAav 172 (414)
.....++..+++.++..+++.+|||. .|++++ .++.. |+ ...+.++++.||.|||++|
T Consensus 169 ~~a~~~i~~al~~~~~~~~~dviii~-RGGGs~------eDL~~--------------Fn-~e~~~rai~~~~~Pvis~i 226 (432)
T TIGR00237 169 EGAVQSIVESIELANTKNECDVLIVG-RGGGSL------EDLWS--------------FN-DEKVARAIFLSKIPIISAV 226 (432)
T ss_pred ccHHHHHHHHHHHhhcCCCCCEEEEe-cCCCCH------HHhhh--------------cC-cHHHHHHHHcCCCCEEEec
Confidence 34567888888888876667777763 332332 22221 11 1256779999999999988
Q ss_pred CCccccchhhhh-ccCCeEEEcCCe
Q 015014 173 DGVTMGFGIGIS-GHGRYRIVTEKT 196 (414)
Q Consensus 173 nG~a~GgG~~La-la~D~ria~~~a 196 (414)
||-.- ..|+ +.+|.|..|+++
T Consensus 227 -GHe~D--~ti~D~vAd~ra~TPta 248 (432)
T TIGR00237 227 -GHETD--FTISDFVADLRAPTPSA 248 (432)
T ss_pred -CcCCC--ccHHHHhhhccCCCcHH
Confidence 44321 2333 678888777753
No 152
>KOG0840 consensus ATP-dependent Clp protease, proteolytic subunit [Posttranslational modification, protein turnover, chaperones]
Probab=74.31 E-value=19 Score=34.47 Aligned_cols=134 Identities=16% Similarity=0.123 Sum_probs=70.1
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEE
Q 015014 90 AMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYI 169 (414)
Q Consensus 90 al~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvI 169 (414)
.+++++-+.+...|-.++.++.-|=|.+.=..| |+++..- ...+..+.-++-||=
T Consensus 100 ~Idd~va~~viaqlL~Ld~ed~~K~I~lyINSP-----GG~vtag--------------------lAIYDtMq~ik~~V~ 154 (275)
T KOG0840|consen 100 PIDDDVANLVIAQLLYLDSEDPKKPIYLYINSP-----GGSVTAG--------------------LAIYDTMQYIKPDVS 154 (275)
T ss_pred cCcHHHHHHHHHHHHHhhccCCCCCeEEEEeCC-----CCccchh--------------------hhHHHHHHhhCCCce
Confidence 478888888888888888766667666653322 3333110 112224444556665
Q ss_pred EEECCccccchhhhhccCCeEEEcCCeeEecccccCCCC-CChh----HHHHHh--hCCCc-H-H-HHHHHHhcCC----
Q 015014 170 SLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLF-PDVG----FSYIAA--KGPGG-G-S-VGAYLGMTGK---- 235 (414)
Q Consensus 170 AavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~-P~~g----~~~~L~--r~~G~-~-~-~a~~l~ltG~---- 235 (414)
..+=|.|.+-|.-|..+ .++.-+|+||..++=+. |-+| .+-... +.+-+ . . .-.+.--||+
T Consensus 155 Tic~G~Aas~aalLLaa-----G~KG~R~alPnsriMIhQP~gga~Gqa~Di~i~akE~~~~k~~l~~i~a~~Tgq~~e~ 229 (275)
T KOG0840|consen 155 TICVGLAASMAALLLAA-----GAKGKRYALPNSRIMIHQPSGGAGGQATDIVIQAKELMRIKEYLNEIYAKHTGQPLEV 229 (275)
T ss_pred eeehhhHHhHHHHHHhc-----CCCcceeecCCceeEEeccCCCcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH
Confidence 55567776655444333 23344555555554442 2221 111110 00000 0 0 0011123444
Q ss_pred ---------CCCcHHHHHHcCccceecC
Q 015014 236 ---------RISTPSDALFAGLGTDYVP 254 (414)
Q Consensus 236 ---------~i~~a~eA~~~GLv~~vv~ 254 (414)
-++ |+||++.||+|.|+.
T Consensus 230 i~~d~dRd~fms-a~EA~eyGliD~v~~ 256 (275)
T KOG0840|consen 230 IEKDMDRDRFMS-AEEAKEYGLIDKVID 256 (275)
T ss_pred HHhhhcccccCC-HHHHHHhcchhhhhc
Confidence 377 999999999999986
No 153
>COG1570 XseA Exonuclease VII, large subunit [DNA replication, recombination, and repair]
Probab=69.83 E-value=9.4 Score=39.40 Aligned_cols=76 Identities=17% Similarity=0.218 Sum_probs=47.0
Q ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECC
Q 015014 95 MDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDG 174 (414)
Q Consensus 95 m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG 174 (414)
...++.++++.+++.+++.++|+ |.| |+-+.++-. |+ ...+.++++.++.|||++| |
T Consensus 177 A~~eIv~aI~~an~~~~~DvlIV-aRG------GGSiEDLW~--------------FN-dE~vaRAi~~s~iPvISAV-G 233 (440)
T COG1570 177 AAEEIVEAIERANQRGDVDVLIV-ARG------GGSIEDLWA--------------FN-DEIVARAIAASRIPVISAV-G 233 (440)
T ss_pred cHHHHHHHHHHhhccCCCCEEEE-ecC------cchHHHHhc--------------cC-hHHHHHHHHhCCCCeEeec-c
Confidence 35677777777777777777776 333 223333322 11 1246779999999999998 4
Q ss_pred ccccchhhhh-ccCCeEEEcCC
Q 015014 175 VTMGFGIGIS-GHGRYRIVTEK 195 (414)
Q Consensus 175 ~a~GgG~~La-la~D~ria~~~ 195 (414)
|-. =+.|+ +.+|+|-.|++
T Consensus 234 HEt--D~tL~DfVAD~RApTPT 253 (440)
T COG1570 234 HET--DFTLADFVADLRAPTPT 253 (440)
T ss_pred cCC--CccHHHhhhhccCCCch
Confidence 432 23344 56777777764
No 154
>PRK00286 xseA exodeoxyribonuclease VII large subunit; Reviewed
Probab=69.33 E-value=7.2 Score=40.39 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=46.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEEC
Q 015014 94 DMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMD 173 (414)
Q Consensus 94 ~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavn 173 (414)
....++..+|+.++... +.+||| +.|++++ .++.. |+ ...+..+++.|+.|||++|
T Consensus 176 ~A~~~i~~al~~~~~~~-~Dviii-~RGGGS~------eDL~~--------------Fn-~e~v~~ai~~~~~Pvis~I- 231 (438)
T PRK00286 176 GAAASIVAAIERANARG-EDVLIV-ARGGGSL------EDLWA--------------FN-DEAVARAIAASRIPVISAV- 231 (438)
T ss_pred cHHHHHHHHHHHhcCCC-CCEEEE-ecCCCCH------HHhhc--------------cC-cHHHHHHHHcCCCCEEEec-
Confidence 44677888888877643 566666 3332322 22221 11 1357779999999999988
Q ss_pred Cccccchhhhh-ccCCeEEEcCCe
Q 015014 174 GVTMGFGIGIS-GHGRYRIVTEKT 196 (414)
Q Consensus 174 G~a~GgG~~La-la~D~ria~~~a 196 (414)
||-.- ..|+ +.+|.|..|+++
T Consensus 232 GHE~D--~tl~D~vAd~ra~TPta 253 (438)
T PRK00286 232 GHETD--FTIADFVADLRAPTPTA 253 (438)
T ss_pred cCCCC--ccHHHHhhhccCCChHH
Confidence 44321 2233 678888877754
No 155
>KOG0540 consensus 3-Methylcrotonyl-CoA carboxylase, non-biotin containing subunit/Acetyl-CoA carboxylase carboxyl transferase, subunit beta [Amino acid transport and metabolism; Lipid transport and metabolism]
Probab=67.78 E-value=39 Score=34.99 Aligned_cols=150 Identities=13% Similarity=0.092 Sum_probs=96.6
Q ss_pred EEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHH
Q 015014 80 ITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLI 158 (414)
Q Consensus 80 Itlnrp~-~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~ 158 (414)
|.-|+|+ ..-.|..+.-....+.++...+ ..+-.|.|...+ + |--|.+..... ..+....+.
T Consensus 353 Ivgnn~kf~~G~L~s~sa~KgarfIe~c~q-~~IPLi~l~ni~-G-fm~g~~~e~~g--------------IaK~gAklv 415 (536)
T KOG0540|consen 353 IVGNNPKFAGGVLFSESAVKGARFIELCDQ-RNIPLIFLQNIT-G-FMVGRAAEAGG--------------IAKHGAKLV 415 (536)
T ss_pred EeccCchhcccccchhhhhhhHHHHHHHHh-cCCcEEEEEccC-C-ccccchhhhhc--------------hhhhhhhhh
Confidence 4446665 3456777777777777665554 567788887765 3 98888876432 122233567
Q ss_pred HHHhhCCCcEEEEECCccccchhh---hhccCCeEEEcCCeeEecccccCCCCCChhHHHHHhhC-----CCcHHHHHHH
Q 015014 159 CKISEYKKPYISLMDGVTMGFGIG---ISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAAKG-----PGGGSVGAYL 230 (414)
Q Consensus 159 ~~l~~~~kPvIAavnG~a~GgG~~---Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~r~-----~G~~~~a~~l 230 (414)
.+.....+|-|..+-|.+.||-.. -.+.-||.++-++|++++--.+ ++.-.|.+. +...+...|.
T Consensus 416 ~a~a~akvpkITiit~~syGG~y~m~sr~~~gd~~yawP~A~IavmG~~-------~a~~Vi~q~~~e~a~~~~~~~~E~ 488 (536)
T KOG0540|consen 416 YAVACAKVPKITIITGGSYGGNYAMCSRGYSGDINYAWPNARIAVMGGK-------QAANVIFQITLEKAVALKAPYIEK 488 (536)
T ss_pred hhhhhccCceEEEEecCccCCcccccccccCCceeEEcccceeeecccc-------chhhhhhhhhhhhhhhhcchHHHH
Confidence 788889999999999999997655 4467788888877777653321 222222222 2211233444
Q ss_pred HhcCCCCCcHHHHHHcCccceecCCCCHH
Q 015014 231 GMTGKRISTPSDALFAGLGTDYVPSGNLG 259 (414)
Q Consensus 231 ~ltG~~i~~a~eA~~~GLv~~vv~~~~l~ 259 (414)
+ |.++. |...|++|.++++.+..
T Consensus 489 f--~npy~----a~~Rg~~D~II~p~~tR 511 (536)
T KOG0540|consen 489 F--GNPYY----AAARGWDDGIIDPSDTR 511 (536)
T ss_pred h--cCccH----HHHhhccccccChhHhh
Confidence 4 77776 35679999999987653
No 156
>COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]
Probab=66.90 E-value=48 Score=35.19 Aligned_cols=160 Identities=16% Similarity=0.163 Sum_probs=96.0
Q ss_pred EEEEEEcCCC-CCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHH
Q 015014 77 VAVITLDRPK-ALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEY 155 (414)
Q Consensus 77 V~~Itlnrp~-~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~ 155 (414)
|++ .=|.|. ..-+|+.+--..-.+.+ ++++-.++-.|.|.-. ..|.-|-|-.. ....+...
T Consensus 326 VGi-IANqp~~~~G~l~~~sa~KaArFI-~~cd~~~iPlv~L~d~--pGFm~G~~~E~--------------~giik~Ga 387 (526)
T COG4799 326 VGI-IANQPRHLGGVLDIDSADKAARFI-RLCDAFNIPLVFLVDT--PGFMPGTDQEY--------------GGIIKHGA 387 (526)
T ss_pred EEE-EecCccccccccchHHHHHHHHHH-HhhhccCCCeEEEeCC--CCCCCChhHHh--------------ChHHHhhh
Confidence 454 446665 34589999888888888 4555566888888654 46998877542 11344556
Q ss_pred HHHHHHhhCCCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccccCCCCCChhHHHHHh-hCCCcHHH-HHH----
Q 015014 156 SLICKISEYKKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPENGIGLFPDVGFSYIAA-KGPGGGSV-GAY---- 229 (414)
Q Consensus 156 ~l~~~l~~~~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~P~~g~~~~L~-r~~G~~~~-a~~---- 229 (414)
+++.++..+.+|.|..|-|.+.|||.--+..-.+ ..+-.|+.|..++|..-+-|+.-.+- +.+....+ ..+
T Consensus 388 kl~~A~aeatVPkitvI~rkayGga~~~M~~~~~---~~~~~~AwP~a~iaVMG~egAv~i~~~k~l~~~~~~~~~~~~~ 464 (526)
T COG4799 388 KLLYAVAEATVPKITVITRKAYGGAYYVMGGKAL---GPDFNYAWPTAEIAVMGPEGAVSILYRKELAAAERPEEREALL 464 (526)
T ss_pred HHHhhHhhccCCeEEEEecccccceeeeecCccC---CCceeEecCcceeeecCHHHHHHHHHHHHhhcccCchhHHHHH
Confidence 7888999999999999999999998654332211 14445555666666544344443332 22110000 000
Q ss_pred ---H--HhcCCCCCcHHHHHHcCccceecCCCCH
Q 015014 230 ---L--GMTGKRISTPSDALFAGLGTDYVPSGNL 258 (414)
Q Consensus 230 ---l--~ltG~~i~~a~eA~~~GLv~~vv~~~~l 258 (414)
+ -+.-+-.. +--|.+.|++|.|+++.+.
T Consensus 465 ~~~~~~eY~~~~~~-p~~aa~r~~iD~vI~p~~t 497 (526)
T COG4799 465 RKQLIAEYEEQFSN-PYYAAERGYIDAVIDPADT 497 (526)
T ss_pred HHHHHHHHHHhccc-hHHHHHhCCCCcccCHHHH
Confidence 0 01111123 4456678999999987654
No 157
>PF13607 Succ_CoA_lig: Succinyl-CoA ligase like flavodoxin domain; PDB: 2CSU_A.
Probab=65.18 E-value=15 Score=31.76 Aligned_cols=52 Identities=19% Similarity=0.296 Sum_probs=27.3
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCcc
Q 015014 98 KYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVT 176 (414)
Q Consensus 98 eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a 176 (414)
.+.+.++.+.+||++++|++.-++- - |-+ .+.+...+.... ||||+..-|..
T Consensus 41 ~~~d~l~~~~~D~~t~~I~ly~E~~---~---d~~--------------------~f~~~~~~a~~~-KPVv~lk~Grt 92 (138)
T PF13607_consen 41 DFADLLEYLAEDPDTRVIVLYLEGI---G---DGR--------------------RFLEAARRAARR-KPVVVLKAGRT 92 (138)
T ss_dssp -HHHHHHHHCT-SS--EEEEEES-----S----HH--------------------HHHHHHHHHCCC-S-EEEEE----
T ss_pred CHHHHHHHHhcCCCCCEEEEEccCC---C---CHH--------------------HHHHHHHHHhcC-CCEEEEeCCCc
Confidence 3567788899999999999998751 1 111 122333445545 99999999974
No 158
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=58.94 E-value=19 Score=35.79 Aligned_cols=15 Identities=40% Similarity=0.727 Sum_probs=12.5
Q ss_pred hCCCcEEEEECCccc
Q 015014 163 EYKKPYISLMDGVTM 177 (414)
Q Consensus 163 ~~~kPvIAavnG~a~ 177 (414)
...||||+.+-|..-
T Consensus 250 ~~~KPVVa~~aGrsa 264 (317)
T PTZ00187 250 PIKKPVVSFIAGITA 264 (317)
T ss_pred cCCCcEEEEEecCCC
Confidence 368999999999764
No 159
>PLN02522 ATP citrate (pro-S)-lyase
Probab=56.42 E-value=29 Score=37.63 Aligned_cols=14 Identities=21% Similarity=0.470 Sum_probs=12.6
Q ss_pred CCCcEEEEECCccc
Q 015014 164 YKKPYISLMDGVTM 177 (414)
Q Consensus 164 ~~kPvIAavnG~a~ 177 (414)
..||||+.+-|.+-
T Consensus 249 ~~KPVVa~kaGrsa 262 (608)
T PLN02522 249 VSKPVVAWVSGTCA 262 (608)
T ss_pred CCCCEEEEeccCCC
Confidence 68999999999876
No 160
>smart00250 PLEC Plectin repeat.
Probab=41.09 E-value=22 Score=23.35 Aligned_cols=19 Identities=37% Similarity=0.447 Sum_probs=17.2
Q ss_pred hcCCCCCcHHHHHHcCccce
Q 015014 232 MTGKRISTPSDALFAGLGTD 251 (414)
Q Consensus 232 ltG~~i~~a~eA~~~GLv~~ 251 (414)
.||++++ -.||++.||+|.
T Consensus 17 ~t~~~ls-v~eA~~~glid~ 35 (38)
T smart00250 17 ETGQKLS-VEEALRRGLIDP 35 (38)
T ss_pred CCCCCcC-HHHHHHcCCCCc
Confidence 4899999 999999999985
No 161
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=38.65 E-value=58 Score=31.95 Aligned_cols=14 Identities=36% Similarity=0.624 Sum_probs=11.9
Q ss_pred CCCcEEEEECCccc
Q 015014 164 YKKPYISLMDGVTM 177 (414)
Q Consensus 164 ~~kPvIAavnG~a~ 177 (414)
..||||+..-|..-
T Consensus 226 ~~KPVV~lk~Grs~ 239 (291)
T PRK05678 226 VTKPVVGYIAGVTA 239 (291)
T ss_pred CCCCEEEEEecCCC
Confidence 48999999999854
No 162
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=37.31 E-value=59 Score=31.77 Aligned_cols=14 Identities=29% Similarity=0.615 Sum_probs=11.9
Q ss_pred CCCcEEEEECCccc
Q 015014 164 YKKPYISLMDGVTM 177 (414)
Q Consensus 164 ~~kPvIAavnG~a~ 177 (414)
..||||+..-|..-
T Consensus 224 ~~KPVV~lk~Grs~ 237 (286)
T TIGR01019 224 MSKPVVGFIAGATA 237 (286)
T ss_pred CCCCEEEEEecCCC
Confidence 68999999988763
No 163
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=33.38 E-value=2.1e+02 Score=27.86 Aligned_cols=117 Identities=9% Similarity=0.103 Sum_probs=68.3
Q ss_pred EEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHH-HH----hhhCCCCCchHHHHH
Q 015014 78 AVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVV-AE----IQKDRNTPLVPKVFT 152 (414)
Q Consensus 78 ~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~-~~----~~~~~~~~~~~~~~~ 152 (414)
-++.||.-. |-++........+++.+.--.+.-++-||-|...+.|.=--|..+.. .. ....+. ..+-.+.+
T Consensus 130 Nilpi~Gs~--h~Vt~~~lAa~~e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~-~~lisfSR 206 (329)
T COG3660 130 NILPINGSP--HNVTSQRLAALREAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGG-SFLISFSR 206 (329)
T ss_pred ceeeccCCC--CcccHHHhhhhHHHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCc-eEEEEeec
Confidence 456777554 77889999999999988866677788788776668886554443321 11 111110 00000111
Q ss_pred HHHH-HHHHHhh-CCCcEEEEECCc--cccchhhhhccCCeEEEcCCee
Q 015014 153 AEYS-LICKISE-YKKPYISLMDGV--TMGFGIGISGHGRYRIVTEKTL 197 (414)
Q Consensus 153 ~~~~-l~~~l~~-~~kPvIAavnG~--a~GgG~~Lala~D~ria~~~a~ 197 (414)
+--+ +-..|.+ ++--.+...|+. -..--+.+..++|++|+|+|+.
T Consensus 207 RTp~~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~~La~Adyii~TaDSi 255 (329)
T COG3660 207 RTPDTVKSILKNNLNSSPGIVWNNEDTGYNPYIDMLAAADYIISTADSI 255 (329)
T ss_pred CCcHHHHHHHHhccccCceeEeCCCCCCCCchHHHHhhcceEEEecchh
Confidence 1111 1112222 455566778877 4445577888999999998864
No 164
>PF09905 DUF2132: Uncharacterized conserved protein (DUF2132); InterPro: IPR018668 This entry contains proteins that have no known function. ; PDB: 2JVW_A.
Probab=33.28 E-value=57 Score=24.29 Aligned_cols=29 Identities=28% Similarity=0.732 Sum_probs=22.1
Q ss_pred hhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHH
Q 015014 304 SCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGM 341 (414)
Q Consensus 304 ~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l 341 (414)
+||..+.|+.+-+.-|++ ..||++-.+.+
T Consensus 34 ~CF~~~PsikSSLkFLRk---------TpWAR~KVE~l 62 (64)
T PF09905_consen 34 NCFKNNPSIKSSLKFLRK---------TPWAREKVENL 62 (64)
T ss_dssp SSTTSS--HHHHHHHHHH---------SHHHHHHHHHH
T ss_pred ccCCCCCchHHHHHHHhc---------CHhHHHHHHHh
Confidence 589999999999999988 45998766654
No 165
>COG4565 CitB Response regulator of citrate/malate metabolism [Transcription / Signal transduction mechanisms]
Probab=31.68 E-value=2.4e+02 Score=26.44 Aligned_cols=58 Identities=17% Similarity=0.090 Sum_probs=32.3
Q ss_pred CCChhHHHHHhhCCCcHHHHHHH-HhcCC-CCCcHHHHHHcCccceecCCCCHHHHHHHHH
Q 015014 208 FPDVGFSYIAAKGPGGGSVGAYL-GMTGK-RISTPSDALFAGLGTDYVPSGNLGSLKEALL 266 (414)
Q Consensus 208 ~P~~g~~~~L~r~~G~~~~a~~l-~ltG~-~i~~a~eA~~~GLv~~vv~~~~l~~~~~~l~ 266 (414)
.|++-|..+|+.+.... ..-+. +.|.. ...+-++|++.|.+|.++.|=..+...++|.
T Consensus 56 mPd~~Gi~lL~~ir~~~-~~~DVI~iTAA~d~~tI~~alr~Gv~DYLiKPf~~eRl~~aL~ 115 (224)
T COG4565 56 MPDGNGIELLPELRSQH-YPVDVIVITAASDMETIKEALRYGVVDYLIKPFTFERLQQALT 115 (224)
T ss_pred cCCCccHHHHHHHHhcC-CCCCEEEEeccchHHHHHHHHhcCchhheecceeHHHHHHHHH
Confidence 36666666665543222 11121 11211 1222579999999999998866665555543
No 166
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=31.49 E-value=41 Score=35.02 Aligned_cols=83 Identities=20% Similarity=0.250 Sum_probs=46.6
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhhHHHHhhhCCCCCchHHHHHHHHHHHHHHhhCCCcEEEEECCccc
Q 015014 98 KYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKGVVAEIQKDRNTPLVPKVFTAEYSLICKISEYKKPYISLMDGVTM 177 (414)
Q Consensus 98 eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~kPvIAavnG~a~ 177 (414)
.+.+.++.+.+||++++|++..++ + .|- ..| .+..++... .||||+..-|..-
T Consensus 190 ~~~d~l~~l~~D~~t~~I~ly~E~---~---~~~----------------~~f----~~aa~~a~~-~KPVv~~k~Grs~ 242 (447)
T TIGR02717 190 DESDLLEYLADDPDTKVILLYLEG---I---KDG----------------RKF----LKTAREISK-KKPIVVLKSGTSE 242 (447)
T ss_pred CHHHHHHHHhhCCCCCEEEEEecC---C---CCH----------------HHH----HHHHHHHcC-CCCEEEEecCCCh
Confidence 455667777777888888877764 1 010 111 122333444 8999999999874
Q ss_pred cchhhhhccCCeEEEcCCeeEecccccCCCC
Q 015014 178 GFGIGISGHGRYRIVTEKTLLAMPENGIGLF 208 (414)
Q Consensus 178 GgG~~Lala~D~ria~~~a~f~~pe~~~Gl~ 208 (414)
.|...+..+-=-++.++..|.--.-+.|++
T Consensus 243 -~g~~aa~sHtgalag~~~~~~a~~~~~Gv~ 272 (447)
T TIGR02717 243 -AGAKAASSHTGALAGSDEAYDAAFKQAGVI 272 (447)
T ss_pred -hhhhhhhhccccccChHHHHHHHHHHCCeE
Confidence 344444333333445554444444455654
No 167
>PF00549 Ligase_CoA: CoA-ligase; InterPro: IPR005811 This entry represents a domain found in both the alpha and beta chains of succinyl-CoA synthase (6.2.1.4 from EC (GDP-forming) and 6.2.1.5 from EC (ADP-forming)) [, ]. This domain can also be found in ATP citrate synthase (2.3.3.8 from EC) and malate-CoA ligase (6.2.1.9 from EC). Some members of the domain utilise ATP others use GTP.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3DMY_B 3MWE_B 3PFF_A 3MWD_B 2YV1_A 1EUC_A 2FP4_A 1EUD_A 2FPI_A 2FPG_A ....
Probab=31.26 E-value=1.3e+02 Score=26.43 Aligned_cols=24 Identities=29% Similarity=0.433 Sum_probs=19.6
Q ss_pred HHHHHHHHHhcCCCceEEEEEeCC
Q 015014 98 KYKSFLDEWESDPRVKCVLIEGSG 121 (414)
Q Consensus 98 eL~~~l~~~~~d~~v~~vVl~g~g 121 (414)
...++|..+.+||++++|++-+.+
T Consensus 60 ~~~~~l~~~~~Dp~v~vIlvd~~~ 83 (153)
T PF00549_consen 60 TRNEALEIEAADPEVKVILVDIVG 83 (153)
T ss_dssp HHHHHHHHHHTSTTESEEEEEEES
T ss_pred HHHHHHHHHhcCCCccEEEEEecc
Confidence 445667888889999999998875
No 168
>PRK06091 membrane protein FdrA; Validated
Probab=30.52 E-value=1.1e+02 Score=32.93 Aligned_cols=52 Identities=19% Similarity=0.282 Sum_probs=28.4
Q ss_pred cCCCChhhHHHHhhhCCCCCchHHHH----HHH-HHHHHHHhhCCCcEEEEECCccc
Q 015014 126 CAGMDIKGVVAEIQKDRNTPLVPKVF----TAE-YSLICKISEYKKPYISLMDGVTM 177 (414)
Q Consensus 126 caG~Dl~~~~~~~~~~~~~~~~~~~~----~~~-~~l~~~l~~~~kPvIAavnG~a~ 177 (414)
+.|.|+.++......++....+-.+. ... .++...++++.||||+..-|..-
T Consensus 235 ~ggi~~~D~L~~L~~DP~TkvIvly~kppaE~v~~~fl~aar~~~KPVVvlk~Grs~ 291 (555)
T PRK06091 235 VGGISALTALEMLSADEKSEVIAFVSKPPAEAVRLKIINAMKATGKPVVALFLGYTP 291 (555)
T ss_pred cCCCCHHHHHHHHhhCCCCcEEEEEEecCchHHHHHHHHHHhhCCCCEEEEEecCCc
Confidence 34666666665544443333211111 111 14555566679999999999754
No 169
>cd03572 ENTH_epsin_related ENTH domain, Epsin Related family; composed of hypothetical proteins containing an ENTH-like domain. The epsin N-terminal homology (ENTH) domain is an evolutionarily conserved protein module found primarily in proteins that participate in clathrin-mediated endocytosis. A set of proteins previously designated as harboring an ENTH domain in fact contains a highly similar, yet unique module referred to as an AP180 N-terminal homology (ANTH) domain. ENTH and ANTH (E/ANTH) domains are structurally similar to the VHS domain and are composed of a superhelix of eight alpha helices. E/ANTH domains bind both inositol phospholipids and proteins and contribute to the nucleation and formation of clathrin coats on membranes. ENTH domains also function in the development of membrane curvature through lipid remodeling during the formation of clathrin-coated vesicles. E/ANTH-bearing proteins have recently been shown to function with adaptor protein-1 and GGA adaptors at the t
Probab=28.68 E-value=3.6e+02 Score=22.81 Aligned_cols=92 Identities=14% Similarity=0.042 Sum_probs=51.0
Q ss_pred hhhHHHHHhhcCCcccHHHHHHHHHhccCccccchHHHHHHHHHHHhcc-ChhHHHHHHHHH---HHHHhhcCCCCc-cc
Q 015014 296 KLLLPQITSCFSSEKSVRQIIEELKKHQSSAETSVAQWADEALQGMGKG-APFSLCLTQKYF---SKVASAHGKTDN-EL 370 (414)
Q Consensus 296 ~~~~~~i~~~F~~~~sv~~i~~~L~~~~~~~~~~~~~~a~~~~~~l~~~-sp~al~~tk~~l---~~~~~~~~~~~~-~~ 370 (414)
....+..+..|.+..++.+|++.|.+.-+....-|.--+-++++.+... |+.-.+..++.. +...+..+.+|+ ..
T Consensus 20 y~~~Eia~~t~~s~~~~~ei~d~L~kRL~~~~~hVK~K~Lrilk~l~~~G~~~f~~~~~~~~~~Ik~~~~f~g~~Dp~~G 99 (122)
T cd03572 20 YLYEEIAKLTRKSVGSCQELLEYLLKRLKRSSPHVKLKVLKIIKHLCEKGNSDFKRELQRNSAQIRECANYKGPPDPLKG 99 (122)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHhhCCHHHHHHHHHhHHHHHHHHHcCCCCCcccC
Confidence 3344555666776678999999997766543334556677777776644 444444433332 233333343444 33
Q ss_pred CCHHHHHHHHHHHHHHh
Q 015014 371 SKLSGVMKYEYRVALRS 387 (414)
Q Consensus 371 ~~l~~~l~~e~~~~~~~ 387 (414)
.++-+..+.+.+-....
T Consensus 100 d~~~~~VR~~A~El~~~ 116 (122)
T cd03572 100 DSLNEKVREEAQELIKA 116 (122)
T ss_pred cchhHHHHHHHHHHHHH
Confidence 45555555555544443
No 170
>PLN00049 carboxyl-terminal processing protease; Provisional
Probab=27.10 E-value=20 Score=36.60 Aligned_cols=101 Identities=11% Similarity=0.082 Sum_probs=53.6
Q ss_pred CcEEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEEEeCCCCCccCCCChhh---HHHHhhhCCCCCchH--H
Q 015014 75 NGVAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLIEGSGPRAFCAGMDIKG---VVAEIQKDRNTPLVP--K 149 (414)
Q Consensus 75 ~~V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g~g~~~FcaG~Dl~~---~~~~~~~~~~~~~~~--~ 149 (414)
++|+.|.++ .++.....++.++++.+... +++.+||-=. ...|+++.+ +.............. .
T Consensus 194 ~~IgYi~i~------~F~~~~~~~~~~~l~~l~~~-~~~glIlDLR----~N~GG~~~~a~~ia~~f~~~~~~~~~~~~~ 262 (389)
T PLN00049 194 PKIGYIKLT------TFNQNASSAVKEAIETLRAN-GVDAFVLDLR----DNSGGLFPAGIEIAKLWLDKGVIVYIADSR 262 (389)
T ss_pred CCEEEEEec------cccchhHHHHHHHHHHHHHC-CCCEEEEEcC----CCCCCCHHHHHHHHHHhcCCCcEEEEecCC
Confidence 478999884 35556678899999998764 4788888422 123445443 222111111000000 0
Q ss_pred HHHHHHHHHHH-HhhCCCcEEEEECCccccchhhhhcc
Q 015014 150 VFTAEYSLICK-ISEYKKPYISLMDGVTMGFGIGISGH 186 (414)
Q Consensus 150 ~~~~~~~l~~~-l~~~~kPvIAavnG~a~GgG~~Lala 186 (414)
-....+..... -....+|+|..+|+.+..++=.++.+
T Consensus 263 ~~~~~~~~~~~~~~~~~~PvvVLvn~~TaSasEi~a~a 300 (389)
T PLN00049 263 GVRDIYDADGSSAIATSEPLAVLVNKGTASASEILAGA 300 (389)
T ss_pred CceeEEecCCCccccCCCCEEEEECCCCccHHHHHHHH
Confidence 00000000000 11246899999999998877666654
No 171
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=26.08 E-value=23 Score=24.22 Aligned_cols=19 Identities=37% Similarity=0.487 Sum_probs=16.0
Q ss_pred hcCCCCCcHHHHHHcCccce
Q 015014 232 MTGKRISTPSDALFAGLGTD 251 (414)
Q Consensus 232 ltG~~i~~a~eA~~~GLv~~ 251 (414)
-||++++ -++|.+.||+|.
T Consensus 17 ~tg~~ls-v~~A~~~glId~ 35 (45)
T PF00681_consen 17 ETGERLS-VEEAIQRGLIDS 35 (45)
T ss_dssp TTTEEEE-HHHHHHTTSS-H
T ss_pred CCCeEEc-HHHHHHCCCcCH
Confidence 4788998 999999999975
No 172
>COG0793 Prc Periplasmic protease [Cell envelope biogenesis, outer membrane]
Probab=25.39 E-value=54 Score=33.74 Aligned_cols=97 Identities=14% Similarity=0.222 Sum_probs=57.1
Q ss_pred EEEEEEcCCCCCCCCCHHHHHHHHHHHHHHhcCCCceEEEE--EeCCCCCccCCCChhhHHHHhh-----hCCCCCchHH
Q 015014 77 VAVITLDRPKALNAMNLDMDIKYKSFLDEWESDPRVKCVLI--EGSGPRAFCAGMDIKGVVAEIQ-----KDRNTPLVPK 149 (414)
Q Consensus 77 V~~Itlnrp~~~Nal~~~m~~eL~~~l~~~~~d~~v~~vVl--~g~g~~~FcaG~Dl~~~~~~~~-----~~~~~~~~~~ 149 (414)
|+.|+|. .|+.....+|..++..++++. ++++|| ++.+++......++..+.-... ....... ..
T Consensus 205 IGyI~I~------~F~~~~~~~~~~al~~L~~~~-~~GlIlDLR~N~GG~L~~av~i~~~f~~~g~iv~~~~r~g~~-~~ 276 (406)
T COG0793 205 IGYIRIP------SFGEGTYEDLEKALDELKKQG-AKGLILDLRNNPGGLLSQAVKLAGLFLPSGPIVSTRGRNGKV-NV 276 (406)
T ss_pred EEEEEec------ccccchHHHHHHHHHHHHhcC-CcEEEEEeCCCCCccHHHHHHHHHcccCCCcEEEEecCCCce-ee
Confidence 8888875 466667778999999999876 899888 4554455555555443221000 0000000 00
Q ss_pred HHHHHHHHHHHHhhCCCcEEEEECCccccchhhhhcc
Q 015014 150 VFTAEYSLICKISEYKKPYISLMDGVTMGFGIGISGH 186 (414)
Q Consensus 150 ~~~~~~~l~~~l~~~~kPvIAavnG~a~GgG~~Lala 186 (414)
++.. ..-...++|+|..||+....++=.++.+
T Consensus 277 ~~~~-----~~~~~~~~PlvvLvn~~SASAsEI~aga 308 (406)
T COG0793 277 YFSA-----SGEALYDGPLVVLVNEGSASASEIFAGA 308 (406)
T ss_pred cccc-----ccccCCCCCEEEEECCCCccHHHHHHHH
Confidence 0000 0001458999999999998777666644
No 173
>PF11251 DUF3050: Protein of unknown function (DUF3050); InterPro: IPR024423 This family of proteins has no known function.
Probab=24.90 E-value=3.4e+02 Score=25.69 Aligned_cols=63 Identities=10% Similarity=0.216 Sum_probs=52.2
Q ss_pred cchhhhhHHHHHhhcCCcccHHHHHHHHHhccC--------ccccchHHHHHHHHHHHhccChhHHHHHHH
Q 015014 292 EAPLKLLLPQITSCFSSEKSVRQIIEELKKHQS--------SAETSVAQWADEALQGMGKGAPFSLCLTQK 354 (414)
Q Consensus 292 ~~~~~~~~~~i~~~F~~~~sv~~i~~~L~~~~~--------~~~~~~~~~a~~~~~~l~~~sp~al~~tk~ 354 (414)
..+.+.++++..++=.+...++..++.+++..+ ..+..+.+|.+.|.+-|..++|..++.++-
T Consensus 79 ~SHFElYl~AM~e~GAdt~~I~~fl~~~~~g~~v~~Al~~~~~p~~~~~Fv~~Tf~~i~~~~~H~iAAaFt 149 (232)
T PF11251_consen 79 ISHFELYLDAMEEVGADTSPIDRFLSLLREGTSVFEALQQADVPEPAKRFVRFTFEIIAEGKPHEIAAAFT 149 (232)
T ss_pred ccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCHHHHHHhcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 357889999999999988899999999988643 345567889999999999999999888764
No 174
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=24.44 E-value=1.6e+02 Score=28.94 Aligned_cols=14 Identities=29% Similarity=0.657 Sum_probs=11.6
Q ss_pred CCCcEEEEECCccc
Q 015014 164 YKKPYISLMDGVTM 177 (414)
Q Consensus 164 ~~kPvIAavnG~a~ 177 (414)
..||||+..-|..-
T Consensus 232 ~~KPVV~lk~Grs~ 245 (300)
T PLN00125 232 TEKPVVAFIAGLTA 245 (300)
T ss_pred CCCCEEEEEecCCC
Confidence 38999999988763
No 175
>smart00870 Asparaginase Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The enzyme is effective in the treatment of human malignant lymphomas, which have a diminished capacity to produce asparagine synthetase: in order to survive, such cells absorb asparagine from blood plasma PUBMED:2407723, PUBMED:3379033 - if Asn levels have been depleted by injection of asparaginase, the lymphoma cells die.
Probab=22.84 E-value=2.5e+02 Score=27.75 Aligned_cols=31 Identities=16% Similarity=0.084 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCceEEEEEe
Q 015014 89 NAMNLDMDIKYKSFLDEWESDPRVKCVLIEG 119 (414)
Q Consensus 89 Nal~~~m~~eL~~~l~~~~~d~~v~~vVl~g 119 (414)
--|+++.+.+|.+.++..-+++++.++|++-
T Consensus 55 s~~t~~~w~~la~~i~~~~~~~~~dG~VVtH 85 (323)
T smart00870 55 SNMTPADWLKLAKRINEALADDGYDGVVVTH 85 (323)
T ss_pred ccCCHHHHHHHHHHHHHHhccCCCCEEEEec
Confidence 4589999999999998765556666666654
No 176
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=22.10 E-value=3.7e+02 Score=26.48 Aligned_cols=116 Identities=14% Similarity=0.135 Sum_probs=62.0
Q ss_pred CCCCCHHHHHHHHHHH-HHHhcCCCceEEEEEeCCCCCccCCCC-hhhHH----HHhhhCCCCCchHHHHHHHHHHHHHH
Q 015014 88 LNAMNLDMDIKYKSFL-DEWESDPRVKCVLIEGSGPRAFCAGMD-IKGVV----AEIQKDRNTPLVPKVFTAEYSLICKI 161 (414)
Q Consensus 88 ~Nal~~~m~~eL~~~l-~~~~~d~~v~~vVl~g~g~~~FcaG~D-l~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~l 161 (414)
.|.++.+-+.+-...+ ..+...+.-++.||-|...+.|-=+-+ ...+. .........-.+..-.+...+....|
T Consensus 122 ~~~i~~~~l~~a~~~~~~~~~~l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~~~~~vttSRRTp~~~~~~L 201 (311)
T PF06258_consen 122 PNRITPERLAEAAAAWAPRLAALPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYGGSLLVTTSRRTPPEAEAAL 201 (311)
T ss_pred CCcCCHHHHHHHHHhhhhhhccCCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCCCeEEEEcCCCCcHHHHHHH
Confidence 5889988887765554 456666777888887754456644433 11221 11111110000000000001122223
Q ss_pred hhC--CCcEEEEECCccccchhhhhccCCeEEEcCCeeEecccc
Q 015014 162 SEY--KKPYISLMDGVTMGFGIGISGHGRYRIVTEKTLLAMPEN 203 (414)
Q Consensus 162 ~~~--~kPvIAavnG~a~GgG~~Lala~D~ria~~~a~f~~pe~ 203 (414)
... +.|-+-..+|.--+-=.++...||.+|+|+|+.=.+.|.
T Consensus 202 ~~~~~~~~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA 245 (311)
T PF06258_consen 202 RELLKDNPGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEA 245 (311)
T ss_pred HHhhcCCCceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHH
Confidence 222 345554557777777788889999999999876555554
No 177
>PF03464 eRF1_2: eRF1 domain 2; InterPro: IPR005141 This domain is found in the release factor eRF1 which terminates protein biosynthesis by recognizing stop codons at the A site of the ribosome and stimulating peptidyl-tRNA bond hydrolysis at the peptidyl transferase centre. The crystal structure of human eRF1 is known []. The overall shape and dimensions of eRF1 resemble a tRNA molecule with domains 1, 2, and 3 of eRF1 corresponding to the anticodon loop, aminoacyl acceptor stem, and T stem of a tRNA molecule, respectively. The position of the essential GGQ motif at an exposed tip of domain 2 suggests that the Gln residue coordinates a water molecule to mediate the hydrolytic activity at the peptidyl transferase centre. A conserved groove on domain 1, 80 A from the GGQ motif, is proposed to form the codon recognition site []. This domain is also found in other proteins which may also be involved in translation termination ; PDB: 3AGK_A 2VGN_A 2VGM_A 3J16_A 3IZQ 3IR9_A 3OBW_A 3MCA_B 2QI2_A 3E1Y_D ....
Probab=20.82 E-value=1.6e+02 Score=24.94 Aligned_cols=45 Identities=20% Similarity=0.289 Sum_probs=30.5
Q ss_pred EEEEEEcCCCCCCCC--C----------HHHHHHHHHHHHHH--hcCCCceEEEEEeCC
Q 015014 77 VAVITLDRPKALNAM--N----------LDMDIKYKSFLDEW--ESDPRVKCVLIEGSG 121 (414)
Q Consensus 77 V~~Itlnrp~~~Nal--~----------~~m~~eL~~~l~~~--~~d~~v~~vVl~g~g 121 (414)
+..|+.+-|.|...= + ...+.++.+.+... -+.+.++.|||.|.|
T Consensus 25 ~~~i~~~ip~K~~~Gg~s~~rf~r~~~~~~f~~~i~~~l~~~f~~~~~~~~~iIiaGPG 83 (133)
T PF03464_consen 25 LQRIESNIPGKHKKGGQSQRRFEREKALEKFFKEIAEALKKYFLVNFDDVKCIIIAGPG 83 (133)
T ss_dssp EEEEE-GHCCCSSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHCCCHTTTCSEEEEEEST
T ss_pred EEEEEecCCCccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhhhccccccEEEEECCH
Confidence 466788888886542 2 24566666666665 556789999999876
Done!