BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 015016
         (414 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|302142613|emb|CBI19816.3| unnamed protein product [Vitis vinifera]
          Length = 542

 Score =  754 bits (1946), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/411 (86%), Positives = 386/411 (93%), Gaps = 1/411 (0%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
           A +E+E  VEE+   EKGGELL CGSTCWDA+GRRKG L+GNLVSPTRLRPLVGVDIRFV
Sbjct: 3   AAVESENKVEEKK-SEKGGELLLCGSTCWDAIGRRKGTLEGNLVSPTRLRPLVGVDIRFV 61

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           AAGC SCHCVA+DVEGRCYTWGRNERGQLGHGDK+QRDRPT VSELSKYKI +AG+GRSH
Sbjct: 62  AAGCASCHCVALDVEGRCYTWGRNERGQLGHGDKLQRDRPTFVSELSKYKIIRAGSGRSH 121

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           +VVV+EDG SLAFGWNKHGQLGSGS++NE+E SPVRCLVSEV   ACGA+FTVWLSS EG
Sbjct: 122 SVVVSEDGQSLAFGWNKHGQLGSGSVKNEVELSPVRCLVSEVKTVACGAEFTVWLSSAEG 181

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
           ASIL AGLPQYGQLGHGTDNEYN+KDSSV+LAYE QPRP+AIA+L+GETIVKVACGTNHT
Sbjct: 182 ASILTAGLPQYGQLGHGTDNEYNSKDSSVRLAYEPQPRPKAIASLSGETIVKVACGTNHT 241

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           VAVDS G+VYTWGFGGYGRLGHREQKDEWVPRRV+VFQR NVLPPEAVISAGSVNSSCTA
Sbjct: 242 VAVDSSGHVYTWGFGGYGRLGHREQKDEWVPRRVEVFQRQNVLPPEAVISAGSVNSSCTA 301

Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
           GGGQLYMWGK+K  GDDWMYPKPLMDLSGW+L CMDSGNMHHFVGADSSCISWGHAQYGE
Sbjct: 302 GGGQLYMWGKIKITGDDWMYPKPLMDLSGWHLNCMDSGNMHHFVGADSSCISWGHAQYGE 361

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           LGYGP GQKSSA+PKKVDILEGMHVI+VACG+G+S+V+VDRTNVG+RLDQ+
Sbjct: 362 LGYGPNGQKSSAVPKKVDILEGMHVITVACGFGNSMVVVDRTNVGDRLDQL 412


>gi|255538862|ref|XP_002510496.1| Protein RCC2, putative [Ricinus communis]
 gi|223551197|gb|EEF52683.1| Protein RCC2, putative [Ricinus communis]
          Length = 529

 Score =  751 bits (1940), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/415 (85%), Positives = 386/415 (93%), Gaps = 3/415 (0%)

Query: 1   MAELEAEKMVEEET---GKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD 57
           M+ +E +K  +EE      EKGGELLFCG+TCWD +GR+KGA +GNL+SPTRLRPLVGVD
Sbjct: 1   MSAVEEDKKGDEENEVAAAEKGGELLFCGATCWDIIGRKKGAQEGNLISPTRLRPLVGVD 60

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           IRFVA+GC SCHCVA+DVEGRCYTWGRNE+GQLGHGD+IQRDRPT+VSELSKYKI +AGA
Sbjct: 61  IRFVASGCSSCHCVALDVEGRCYTWGRNEKGQLGHGDRIQRDRPTVVSELSKYKIIRAGA 120

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           GRSHTVVVTEDG SLAFGWNKHGQLGSGS ++E+E SPVRCLVS+V  TACGA+FTVWLS
Sbjct: 121 GRSHTVVVTEDGLSLAFGWNKHGQLGSGSAKSEVESSPVRCLVSDVKNTACGAEFTVWLS 180

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           SVEGASIL AGLPQYGQLGHGTDNEYNTKDSSV+LAYEAQPRPRAIA+L+GETIVKVACG
Sbjct: 181 SVEGASILTAGLPQYGQLGHGTDNEYNTKDSSVRLAYEAQPRPRAIASLSGETIVKVACG 240

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
           TNHTVAVDS GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR+NVLPP+AV+SAGSVNS
Sbjct: 241 TNHTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRHNVLPPDAVVSAGSVNS 300

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
           SCTAGGGQLYMWGK+KN GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD+SCISWGHA
Sbjct: 301 SCTAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHA 360

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           QYGELGYGP  QKSSA+PKKVDILEGMHVI VACG GHS+VIVDR NV  RL+Q+
Sbjct: 361 QYGELGYGPNAQKSSAVPKKVDILEGMHVIGVACGMGHSMVIVDRANVDNRLEQL 415


>gi|224082962|ref|XP_002306909.1| predicted protein [Populus trichocarpa]
 gi|222856358|gb|EEE93905.1| predicted protein [Populus trichocarpa]
          Length = 539

 Score =  747 bits (1928), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/413 (85%), Positives = 384/413 (92%), Gaps = 1/413 (0%)

Query: 1   MAELEAEKMVEEETG-KEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIR 59
           M+ +EAEK   EET  +EKGGELLFCG+TCW+ VGR+KGA +GNLVSP+RLRPLVGVDIR
Sbjct: 1   MSAVEAEKKAAEETKVEEKGGELLFCGATCWNVVGRKKGAQEGNLVSPSRLRPLVGVDIR 60

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            VA+G  SCHCVA+DVEGRCYTWGRNERGQLGHGD IQRDRPT+VSELSKYK+ +AGAGR
Sbjct: 61  VVASGSASCHCVALDVEGRCYTWGRNERGQLGHGDTIQRDRPTVVSELSKYKLIRAGAGR 120

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
           SH+VVVTEDG SLAFGWNKHGQLGSGS RNEIE SPVRCLVS+V  TACGADFTVWLSSV
Sbjct: 121 SHSVVVTEDGLSLAFGWNKHGQLGSGSARNEIESSPVRCLVSDVKTTACGADFTVWLSSV 180

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           EGASIL+AGLPQYGQLGHGTD EYNTKDSSV+LAYEAQPRPRAIA+LAGETIVKVACGTN
Sbjct: 181 EGASILSAGLPQYGQLGHGTDKEYNTKDSSVRLAYEAQPRPRAIASLAGETIVKVACGTN 240

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           HTVAVDS GYVYTWGFGGYGRLGHREQKDEWVPRRVD+F ++NVLPP AVISAGSV+S+C
Sbjct: 241 HTVAVDSNGYVYTWGFGGYGRLGHREQKDEWVPRRVDIFTKHNVLPPGAVISAGSVSSAC 300

Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           TAGGGQLYMWGK+KN GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD+SCISWG+A  
Sbjct: 301 TAGGGQLYMWGKIKNTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGYALN 360

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           GELGYGP GQKSSA+PKKVDILEGMHVI VACG GHS+VIVDRTNVG+ LDQ+
Sbjct: 361 GELGYGPNGQKSSAVPKKVDILEGMHVIGVACGTGHSMVIVDRTNVGDGLDQL 413


>gi|225458061|ref|XP_002278592.1| PREDICTED: protein RCC2 homolog [Vitis vinifera]
          Length = 548

 Score =  745 bits (1924), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/417 (84%), Positives = 386/417 (92%), Gaps = 7/417 (1%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
           A +E+E  VEE+   EKGGELL CGSTCWDA+GRRKG L+GNLVSPTRLRPLVGVDIRFV
Sbjct: 3   AAVESENKVEEKK-SEKGGELLLCGSTCWDAIGRRKGTLEGNLVSPTRLRPLVGVDIRFV 61

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           AAGC SCHCVA+DVEGRCYTWGRNERGQLGHGDK+QRDRPT VSELSKYKI +AG+GRSH
Sbjct: 62  AAGCASCHCVALDVEGRCYTWGRNERGQLGHGDKLQRDRPTFVSELSKYKIIRAGSGRSH 121

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRN------EIEPSPVRCLVSEVTATACGADFTVW 175
           +VVV+EDG SLAFGWNKHGQLGSGS++N      ++E SPVRCLVSEV   ACGA+FTVW
Sbjct: 122 SVVVSEDGQSLAFGWNKHGQLGSGSVKNGRFNFLKVELSPVRCLVSEVKTVACGAEFTVW 181

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           LSS EGASIL AGLPQYGQLGHGTDNEYN+KDSSV+LAYE QPRP+AIA+L+GETIVKVA
Sbjct: 182 LSSAEGASILTAGLPQYGQLGHGTDNEYNSKDSSVRLAYEPQPRPKAIASLSGETIVKVA 241

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CGTNHTVAVDS G+VYTWGFGGYGRLGHREQKDEWVPRRV+VFQR NVLPPEAVISAGSV
Sbjct: 242 CGTNHTVAVDSSGHVYTWGFGGYGRLGHREQKDEWVPRRVEVFQRQNVLPPEAVISAGSV 301

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
           NSSCTAGGGQLYMWGK+K  GDDWMYPKPLMDLSGW+L CMDSGNMHHFVGADSSCISWG
Sbjct: 302 NSSCTAGGGQLYMWGKIKITGDDWMYPKPLMDLSGWHLNCMDSGNMHHFVGADSSCISWG 361

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           HAQYGELGYGP GQKSSA+PKKVDILEGMHVI+VACG+G+S+V+VDRTNVG+RLDQ+
Sbjct: 362 HAQYGELGYGPNGQKSSAVPKKVDILEGMHVITVACGFGNSMVVVDRTNVGDRLDQL 418


>gi|224065999|ref|XP_002301995.1| predicted protein [Populus trichocarpa]
 gi|222843721|gb|EEE81268.1| predicted protein [Populus trichocarpa]
          Length = 550

 Score =  740 bits (1911), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/391 (88%), Positives = 370/391 (94%)

Query: 22  LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           LLFCG+TCWD +GR+KGA +GNLVSPTRLRPLVGV+IRFVA+G  SCHCVA+DVEGRCYT
Sbjct: 23  LLFCGATCWDIIGRKKGAQEGNLVSPTRLRPLVGVNIRFVASGSASCHCVALDVEGRCYT 82

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WGRNERGQLGHGD IQRDRPT+VSELSKYK+ KAGAGRSHTVVVTEDG SLAFGWNKHGQ
Sbjct: 83  WGRNERGQLGHGDTIQRDRPTVVSELSKYKLIKAGAGRSHTVVVTEDGLSLAFGWNKHGQ 142

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LGSGS RNEIE SPVRCLVS+V  TACGADFTVWLSSVEGASIL+AGLPQYGQLGHGTDN
Sbjct: 143 LGSGSARNEIESSPVRCLVSDVKTTACGADFTVWLSSVEGASILSAGLPQYGQLGHGTDN 202

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
           EYNTKDSSV+LAYEAQPRPRA+ ALA ETIVKVACGTNHTVAVDS GYVYTWGFGGYGRL
Sbjct: 203 EYNTKDSSVRLAYEAQPRPRALTALARETIVKVACGTNHTVAVDSNGYVYTWGFGGYGRL 262

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
           GHREQKDEWVPRRVDVF ++NVLPP+AVISAGSVNS+CTAGGGQLYMWGK+KN GDDWMY
Sbjct: 263 GHREQKDEWVPRRVDVFSKHNVLPPDAVISAGSVNSACTAGGGQLYMWGKIKNTGDDWMY 322

Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           PKPLMDLSGWNLRCMDSGNMHHFVGAD+SCISWGHAQ GELGYGP GQKSSA+PKKVDIL
Sbjct: 323 PKPLMDLSGWNLRCMDSGNMHHFVGADNSCISWGHAQNGELGYGPSGQKSSAVPKKVDIL 382

Query: 382 EGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           EGMHVI VACG GHS+VIVDR NVG++LDQ+
Sbjct: 383 EGMHVIGVACGMGHSMVIVDRMNVGDQLDQL 413


>gi|449460213|ref|XP_004147840.1| PREDICTED: protein RCC2 homolog [Cucumis sativus]
          Length = 543

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 339/393 (86%), Positives = 371/393 (94%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GELLFCG+T WD +GR+KG ++GNLVSPTRLRPLVG+DIRFVA+GC SCHCVA+DVEGRC
Sbjct: 21  GELLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVASGCTSCHCVALDVEGRC 80

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           YTWGRNE+GQLGHGD IQRDRPTIVS+LSKYK+ KAGAGR+HTVVVTEDGNSL+FGWNKH
Sbjct: 81  YTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKH 140

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           GQLGSGSI+NEIE SPVRCLVSEV  TACG +FT WL+S+EGASIL AGLPQYGQLGHGT
Sbjct: 141 GQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFTAWLTSIEGASILTAGLPQYGQLGHGT 200

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
           DNEYNTKDSSV+LAYEAQPRPRAIA+LAGE IVKVACGTNHTVAVDS G+VYTWGFGGYG
Sbjct: 201 DNEYNTKDSSVRLAYEAQPRPRAIASLAGEKIVKVACGTNHTVAVDSNGFVYTWGFGGYG 260

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
           RLGH+EQKDEW PRRVD+FQR N LPP+A+ISAGSVNSSCTAGGGQLYMWGK+KN GDDW
Sbjct: 261 RLGHKEQKDEWAPRRVDIFQRRNTLPPDAIISAGSVNSSCTAGGGQLYMWGKIKNAGDDW 320

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           MYPKPLMDLSGWN+RCMDSGNMHHFVGAD+SCISWGHAQYGELGYGP GQKSSA+PKKVD
Sbjct: 321 MYPKPLMDLSGWNIRCMDSGNMHHFVGADNSCISWGHAQYGELGYGPMGQKSSALPKKVD 380

Query: 380 ILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           ILE MHVISVACG GHS+V+VDRTNV +RLDQ+
Sbjct: 381 ILENMHVISVACGAGHSMVVVDRTNVADRLDQL 413


>gi|356509755|ref|XP_003523611.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 538

 Score =  739 bits (1907), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/391 (87%), Positives = 368/391 (94%)

Query: 22  LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           LLFCG+TCWD +GRRKG +DGNLVSP+RLRPLVGVDIR+VA+GCVSCHCVA+DVEGRCYT
Sbjct: 24  LLFCGATCWDIIGRRKGPVDGNLVSPSRLRPLVGVDIRYVASGCVSCHCVALDVEGRCYT 83

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WGRNE+GQLGHGD IQRDRPT+VSELSKYKI KAG+GRSHTVVVT+DGNSLAFGWNKHGQ
Sbjct: 84  WGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGSGRSHTVVVTDDGNSLAFGWNKHGQ 143

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LGSGS+RNEIE SPVRCLVSEV  TACG DFTVWLSS+EGASIL AGLPQYGQLGHGTDN
Sbjct: 144 LGSGSVRNEIESSPVRCLVSEVKHTACGGDFTVWLSSIEGASILTAGLPQYGQLGHGTDN 203

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
           EYN+KDSSV+L YE QPRPRAIAALAGE IVKVACGTNHTVAVD  G+VYTWGFGGYGRL
Sbjct: 204 EYNSKDSSVRLVYEPQPRPRAIAALAGEAIVKVACGTNHTVAVDKNGFVYTWGFGGYGRL 263

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
           GHREQKDEWVPRRV+VFQ  NVLPP+A+ISAGSVNSSCTAGGGQLYMWGKLKN GDDWMY
Sbjct: 264 GHREQKDEWVPRRVEVFQNRNVLPPDAIISAGSVNSSCTAGGGQLYMWGKLKNTGDDWMY 323

Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           PKPLMDLSGWNL CMDSGNMHHFVGADSSCISWGHAQ GELGYGP GQKSSA+PKKVD+L
Sbjct: 324 PKPLMDLSGWNLLCMDSGNMHHFVGADSSCISWGHAQNGELGYGPTGQKSSAVPKKVDLL 383

Query: 382 EGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           EGMHVISVACG GHS+VIVDR NV +RLDQ+
Sbjct: 384 EGMHVISVACGMGHSMVIVDRANVADRLDQL 414


>gi|356518146|ref|XP_003527743.1| PREDICTED: protein RCC2-like [Glycine max]
          Length = 548

 Score =  737 bits (1903), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 349/399 (87%), Positives = 373/399 (93%), Gaps = 5/399 (1%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           GGELLFCG+TCWD +GRRKGA+DGNLVSP+RLRPLVGVDIR+VA+GCVSCHCVA+DVEGR
Sbjct: 21  GGELLFCGATCWDIIGRRKGAVDGNLVSPSRLRPLVGVDIRYVASGCVSCHCVALDVEGR 80

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           CYTWGRNE+GQLGHGD IQRDRPT+VSELSKYKI KAG+GRSHTVVVTEDGNSLAFGWNK
Sbjct: 81  CYTWGRNEKGQLGHGDTIQRDRPTVVSELSKYKIVKAGSGRSHTVVVTEDGNSLAFGWNK 140

Query: 139 HGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           HGQLGSGS+RN     +IE SPVRCLVS+V  TACG DFTVWLSSVEGASIL AGLPQYG
Sbjct: 141 HGQLGSGSVRNGMLVFKIESSPVRCLVSDVKHTACGGDFTVWLSSVEGASILTAGLPQYG 200

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLGHGTDNEYN+KDSSV+L YE QPRPRAIAALAGETIVKVACGTNHTVAVD  G+VYTW
Sbjct: 201 QLGHGTDNEYNSKDSSVRLVYEPQPRPRAIAALAGETIVKVACGTNHTVAVDKNGFVYTW 260

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           GFGGYGRLGHREQKDEWVPRRV+VFQ  NVLPP++VISAGSVNSSCTAGGGQLYMWGKLK
Sbjct: 261 GFGGYGRLGHREQKDEWVPRRVEVFQNRNVLPPDSVISAGSVNSSCTAGGGQLYMWGKLK 320

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
           N GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG AQ GELGYGP GQKSSA
Sbjct: 321 NTGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGLAQNGELGYGPTGQKSSA 380

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           +PKKVD+LEGMHVISVACG GHS+VIVDR NV +RLDQ+
Sbjct: 381 VPKKVDLLEGMHVISVACGMGHSMVIVDRANVADRLDQL 419


>gi|297850394|ref|XP_002893078.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297338920|gb|EFH69337.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 536

 Score =  709 bits (1829), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/408 (80%), Positives = 373/408 (91%), Gaps = 6/408 (1%)

Query: 11  EEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           ++E+ +EKGGELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRFVA+GC S HC
Sbjct: 11  KDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRFVASGCASFHC 70

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           VA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGRSHTVVV++DG 
Sbjct: 71  VALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRSHTVVVSDDGL 130

Query: 131 SLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASI 184
           SLAFGWNK+GQLGSGS +N     E+E +P+ C+VS EVT  ACGADFTVWLSS EGASI
Sbjct: 131 SLAFGWNKYGQLGSGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTVWLSSTEGASI 190

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           L AGLPQYGQLGHGTDNE+N KDSSVKLAYEAQPRP+AIA+LAGETIVKVACGTNHTVAV
Sbjct: 191 LTAGLPQYGQLGHGTDNEFNMKDSSVKLAYEAQPRPKAIASLAGETIVKVACGTNHTVAV 250

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
           D  G+VYTWG+GGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS NS+CTAGGG
Sbjct: 251 DKNGFVYTWGYGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAIVSAGSANSACTAGGG 310

Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
           QLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISWGHAQYGELGY
Sbjct: 311 QLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISWGHAQYGELGY 370

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           GP GQKSSA PKKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+Q+
Sbjct: 371 GPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQL 418


>gi|30686578|ref|NP_173417.2| regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
 gi|332191788|gb|AEE29909.1| regulator of chromosome condensation (RCC1) family protein
           [Arabidopsis thaliana]
          Length = 538

 Score =  707 bits (1824), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 330/418 (78%), Positives = 373/418 (89%), Gaps = 6/418 (1%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           MAE       ++E+ +EKGGELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRF
Sbjct: 1   MAEAMNSSEKKDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRF 60

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA GC S HCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+
Sbjct: 61  VATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRN 120

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
           HTVVV++DG SL FGWNK+GQLG GS +N     E+E +P+ C+VS EVT  ACGADFTV
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           WLSS EGASIL AGLPQYGQLGHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKV
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACGTNHTVAVD  GYVYTWGFGGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS
Sbjct: 241 ACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGS 300

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
            NS+CTAGGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 301 ANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 360

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           GHAQYGELGYGP GQKSSA PKKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+Q+
Sbjct: 361 GHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQL 418


>gi|22531040|gb|AAM97024.1| unknown protein [Arabidopsis thaliana]
 gi|23197984|gb|AAN15519.1| unknown protein [Arabidopsis thaliana]
          Length = 538

 Score =  705 bits (1820), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/418 (78%), Positives = 372/418 (88%), Gaps = 6/418 (1%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           MAE       ++E+ +EKG ELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRF
Sbjct: 1   MAEAMNSSEKKDESSEEKGSELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRF 60

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA GC S HCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+
Sbjct: 61  VATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRN 120

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
           HTVVV++DG SL FGWNK+GQLG GS +N     E+E +P+ C+VS EVT  ACGADFTV
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           WLSS EGASIL AGLPQYGQLGHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKV
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACGTNHTVAVD  GYVYTWGFGGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS
Sbjct: 241 ACGTNHTVAVDKNGYVYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAILSAGS 300

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
            NS+CTAGGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 301 ANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 360

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           GHAQYGELGYGP GQKSSA PKKVD+LEGMHV+ VACG+ HS+VIVDRT++ +RL+Q+
Sbjct: 361 GHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMGVACGFCHSMVIVDRTDIADRLEQL 418


>gi|157849750|gb|ABV89658.1| UVB-resistance protein UVR8 [Brassica rapa]
          Length = 537

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 331/419 (78%), Positives = 375/419 (89%), Gaps = 8/419 (1%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           MA   +    ++E+ +EKGGELLFCG+T WD VGRRKG ++GNL+SPTRLRPL+GV+IRF
Sbjct: 1   MAATNSTLEKKDESSEEKGGELLFCGATSWDIVGRRKG-VEGNLLSPTRLRPLLGVNIRF 59

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA+GC SCHCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSKYKI KAGAGR+
Sbjct: 60  VASGCASCHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKYKIVKAGAGRN 119

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
           HTVVV+++G S AFGWNKHGQLG G+ +N     E+E SPV C+VS EVT+ ACGADFTV
Sbjct: 120 HTVVVSDEGRSFAFGWNKHGQLGLGTAKNGFVSVEVESSPVPCVVSDEVTSIACGADFTV 179

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           WLSS EGASIL AGLPQYGQLGHGTDNE+N KD SVKLAYEAQPRP+AIA+LAGETIVKV
Sbjct: 180 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDGSVKLAYEAQPRPKAIASLAGETIVKV 239

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG NHTVAVD  G+VYTWGFGGYGRLGHREQKDEW PRR+DVFQRNNVLPP A++SAGS
Sbjct: 240 ACGANHTVAVDKNGFVYTWGFGGYGRLGHREQKDEWSPRRIDVFQRNNVLPPNAIVSAGS 299

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
            NS+CTAGGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 300 ANSACTAGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 359

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT-NVGERLDQV 412
           GHAQYGELGYGP+GQKSSA PKKVDILEGMHV+ VACG+ HS+VIVDRT ++ +RL+Q+
Sbjct: 360 GHAQYGELGYGPHGQKSSAAPKKVDILEGMHVMGVACGFCHSMVIVDRTEDIADRLEQL 418


>gi|242074680|ref|XP_002447276.1| hypothetical protein SORBIDRAFT_06g031820 [Sorghum bicolor]
 gi|241938459|gb|EES11604.1| hypothetical protein SORBIDRAFT_06g031820 [Sorghum bicolor]
          Length = 552

 Score =  661 bits (1706), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 307/402 (76%), Positives = 350/402 (87%), Gaps = 1/402 (0%)

Query: 12  EETGKEKGGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           E  G   G ELL+CG T +DA+GR+  G   GNLVSPTRLRPLVGVDIRFVA+GC +CHC
Sbjct: 24  EAKGTGSGWELLYCGGTSFDAMGRKVVGGAQGNLVSPTRLRPLVGVDIRFVASGCTACHC 83

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           VA+D EG+CYTWGRNE+GQLGHGD + R+ PT+VS+LSKYKI KA  GR+HTVVVT+DG 
Sbjct: 84  VALDAEGKCYTWGRNEKGQLGHGDTLLRNLPTVVSQLSKYKIIKASVGRNHTVVVTDDGK 143

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
           S +FG NKHGQLG+GS+RNEIE SPV C+V+E T   CGADFTVWLSSVEG+SIL AGLP
Sbjct: 144 SFSFGHNKHGQLGTGSLRNEIESSPVSCIVAEATNVVCGADFTVWLSSVEGSSILTAGLP 203

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           QYGQLGHGTDNEYN K+SSV+L Y+ QPRPRAIAA +G+T+VKVACGTNHTVAVDS G+V
Sbjct: 204 QYGQLGHGTDNEYNAKESSVRLTYDPQPRPRAIAAFSGKTVVKVACGTNHTVAVDSSGFV 263

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           YTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A++SAGS +S+CTAGGGQLYMWG
Sbjct: 264 YTWGFGGYGRLGHREQKDEWQPRIVEVFQKHNVLPPNAIVSAGSASSACTAGGGQLYMWG 323

Query: 311 KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           K+KN GDDWMYPKP+MDLSGWN+RCM SGNMHH VGAD SCISWG AQ GELGYGP GQK
Sbjct: 324 KMKNTGDDWMYPKPVMDLSGWNIRCMASGNMHHVVGADDSCISWGVAQNGELGYGPNGQK 383

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           SSA PKKVDILEGMHV SV CG+G SL++VDR NVG+RLDQ+
Sbjct: 384 SSANPKKVDILEGMHVTSVGCGFGLSLIVVDRANVGDRLDQL 425


>gi|218195760|gb|EEC78187.1| hypothetical protein OsI_17792 [Oryza sativa Indica Group]
          Length = 549

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/422 (73%), Positives = 357/422 (84%), Gaps = 11/422 (2%)

Query: 2   AELEAEKMVEEETGKEK----------GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRL 50
           A  E EK+     G+EK          GGELL+CG+T ++ +GR+  G   GNLVSPTR+
Sbjct: 3   ASGEPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPTRM 62

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           R L+GVDIRFVA+GC +CHCVA+D EGRCYTWGRNE+GQLGHGD +QR+ PT+VSELSKY
Sbjct: 63  RSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVSELSKY 122

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           K+ KA  GR+HTVVVT+DG S +FG NKHGQLG+GS+RNEIE SP+ CLV+E T   CGA
Sbjct: 123 KVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGA 182

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           DFTVWLSSVEG++IL AGLPQYGQLGHGTDNEYN KDSSVKLAY+ QPRPRAIA+L+G+T
Sbjct: 183 DFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKT 242

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           IVK ACGTNHTVAVDS GYVYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A+I
Sbjct: 243 IVKAACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAII 302

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
           SAG+ +S+CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+RCM SGNMHH VGAD S
Sbjct: 303 SAGAASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGADDS 362

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
           CISWG AQ GELGYGP GQKSSA PKKVDILEGMHVISV CGYG S ++VDR+   +RL+
Sbjct: 363 CISWGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDRLN 422

Query: 411 QV 412
           Q+
Sbjct: 423 QL 424


>gi|115461118|ref|NP_001054159.1| Os04g0662800 [Oryza sativa Japonica Group]
 gi|113565730|dbj|BAF16073.1| Os04g0662800 [Oryza sativa Japonica Group]
 gi|222629715|gb|EEE61847.1| hypothetical protein OsJ_16512 [Oryza sativa Japonica Group]
          Length = 549

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 311/422 (73%), Positives = 357/422 (84%), Gaps = 11/422 (2%)

Query: 2   AELEAEKMVEEETGKEK----------GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRL 50
           A  E EK+     G+EK          GGELL+CG+T ++ +GR+  G   GNLVSPTR+
Sbjct: 3   ASGEPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPTRM 62

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           R L+GVDIRFVA+GC +CHCVA+D EGRCYTWGRNE+GQLGHGD +QR+ PT+VSELSKY
Sbjct: 63  RSLMGVDIRFVASGCTACHCVALDAEGRCYTWGRNEKGQLGHGDTLQRNLPTVVSELSKY 122

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           K+ KA  GR+HTVVVT+DG S +FG NKHGQLG+GS+RNEIE SP+ CLV+E T   CGA
Sbjct: 123 KVIKASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGA 182

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           DFTVWLSSVEG++IL AGLPQYGQLGHGTDNEYN KDSSVKLAY+ QPRPRAIA+L+G+T
Sbjct: 183 DFTVWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKT 242

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           IVK ACGTNHTVAVDS GYVYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A+I
Sbjct: 243 IVKAACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAII 302

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
           SAG+ +S+CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+RCM SGNMHH VGAD S
Sbjct: 303 SAGAASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGADDS 362

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
           CISWG AQ GELGYGP GQKSSA PKKVDILEGMHVISV CGYG S ++VDR+   +RL+
Sbjct: 363 CISWGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDRLN 422

Query: 411 QV 412
           Q+
Sbjct: 423 QL 424


>gi|212721294|ref|NP_001132288.1| uncharacterized protein LOC100193728 [Zea mays]
 gi|195624280|gb|ACG33970.1| protein RCC2 [Zea mays]
 gi|413919836|gb|AFW59768.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 549

 Score =  659 bits (1701), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 310/407 (76%), Positives = 354/407 (86%), Gaps = 3/407 (0%)

Query: 7   EKMVEEETGKEKGGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPLVGVDIRFVAAGC 65
           EK   +++G   G ELL+CG T +DA+GR+  G   GNLVSPTRLRPLVGVDIRFVA+GC
Sbjct: 21  EKTEAKDSGS--GWELLYCGGTSFDAMGRKVVGGAQGNLVSPTRLRPLVGVDIRFVASGC 78

Query: 66  VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
            +CHCVA+D  G+CYTWGRNE+GQLGHGD + R+ PT+VS+LSKYKI KA  GR+HTVVV
Sbjct: 79  TACHCVALDAGGKCYTWGRNEKGQLGHGDTLLRNLPTVVSQLSKYKIIKACVGRNHTVVV 138

Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
           T+DG SL+FG NKHGQLG+GS+RNEIE SPV C+V+E T  ACGADFT WLSSVEG+SIL
Sbjct: 139 TDDGKSLSFGHNKHGQLGTGSLRNEIESSPVSCIVAEATNVACGADFTAWLSSVEGSSIL 198

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            AGLPQYGQLGHGTDNEYN K+SSVKL YE QPRPRAIAA +G+T+VKVACGTNHTVAVD
Sbjct: 199 TAGLPQYGQLGHGTDNEYNAKESSVKLTYEPQPRPRAIAAFSGKTVVKVACGTNHTVAVD 258

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           S G+VYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A++SAGSV+S+CTAGGGQ
Sbjct: 259 SNGFVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAIVSAGSVSSACTAGGGQ 318

Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
           LYMWGK+KN GDDWMYPKP+MDLSGWN+RCM SGNMHH VGAD SCISWG AQ GELGYG
Sbjct: 319 LYMWGKMKNTGDDWMYPKPVMDLSGWNIRCMASGNMHHIVGADDSCISWGVAQNGELGYG 378

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           P GQKSSA PKKVDILEGMHV SV CG+G SL++VDR NVG+RL Q+
Sbjct: 379 PNGQKSSANPKKVDILEGMHVTSVGCGFGLSLIVVDRANVGDRLGQL 425


>gi|357166571|ref|XP_003580754.1| PREDICTED: protein RCC2-like [Brachypodium distachyon]
          Length = 547

 Score =  645 bits (1664), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 304/398 (76%), Positives = 344/398 (86%), Gaps = 7/398 (1%)

Query: 19  GGELLFCGSTC----WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
           GGELL+CG+T       AVG   G + GNL+SP+RLRPLVGVDIR VA+GC + HCVA+ 
Sbjct: 30  GGELLYCGATVRTMGQKAVG---GGIQGNLLSPSRLRPLVGVDIRSVASGCTAFHCVALG 86

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            +GRCYTWGRNE+GQLGHGD +QRD PTIVSELSKYKI KA  G++HTVVVT+DG + +F
Sbjct: 87  ADGRCYTWGRNEKGQLGHGDTVQRDLPTIVSELSKYKIIKASIGKNHTVVVTDDGKAFSF 146

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G NK+GQLG+GS+RNEIE  PV CLV+EVTA  CG DFTVWLSSVEG+SIL AGLPQYGQ
Sbjct: 147 GHNKYGQLGTGSLRNEIETLPVPCLVTEVTAAVCGGDFTVWLSSVEGSSILTAGLPQYGQ 206

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGHGTDNEYNTKDSSVKL+Y+ QPRPRAIA L+ +TIVKVACGTNHTVAVDS G+VYTWG
Sbjct: 207 LGHGTDNEYNTKDSSVKLSYDPQPRPRAIAVLSEKTIVKVACGTNHTVAVDSSGFVYTWG 266

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           FGGYGRLGHREQKDEW PR V+VFQ+NNVLPP A++SAGS + +CTAGGGQLYMWGK+KN
Sbjct: 267 FGGYGRLGHREQKDEWQPRLVEVFQKNNVLPPNAIVSAGSASCACTAGGGQLYMWGKMKN 326

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
            GDDWMYPKPLMDLSGWN+RCM SGNMHH VGAD SCISWG AQYGELGYGP GQKSSA 
Sbjct: 327 TGDDWMYPKPLMDLSGWNIRCMASGNMHHVVGADDSCISWGAAQYGELGYGPNGQKSSAN 386

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           PKKVD LEGMHV SV CGYG SL+IVDR  +G++LD++
Sbjct: 387 PKKVDSLEGMHVTSVGCGYGMSLIIVDRAKIGDKLDEL 424


>gi|38346072|emb|CAE04840.2| OSJNBa0084K01.12 [Oryza sativa Japonica Group]
          Length = 521

 Score =  567 bits (1461), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 280/419 (66%), Positives = 325/419 (77%), Gaps = 39/419 (9%)

Query: 5   EAEKMVEEETGKEK----------GGELLFCGSTCWDAVGRRK-GALDGNLVSPTRLRPL 53
           E EK+     G+EK          GGELL+CG+T ++ +GR+  G   GNLVSPTR+R L
Sbjct: 6   EPEKVPAAAEGEEKADGAKDAAGSGGELLYCGATNFETMGRKVVGGAQGNLVSPTRMRSL 65

Query: 54  VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
           +GVDIRFVA+GC +     V++    Y W                     V  + +YK+ 
Sbjct: 66  MGVDIRFVASGCSAL----VEMN---YLW---------------------VLNVFRYKVI 97

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
           KA  GR+HTVVVT+DG S +FG NKHGQLG+GS+RNEIE SP+ CLV+E T   CGADFT
Sbjct: 98  KASVGRNHTVVVTDDGKSFSFGHNKHGQLGTGSLRNEIETSPMPCLVTEATNAVCGADFT 157

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           VWLSSVEG++IL AGLPQYGQLGHGTDNEYN KDSSVKLAY+ QPRPRAIA+L+G+TIVK
Sbjct: 158 VWLSSVEGSTILTAGLPQYGQLGHGTDNEYNIKDSSVKLAYDPQPRPRAIASLSGKTIVK 217

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
            ACGTNHTVAVDS GYVYTWGFGGYGRLGHREQKDEW PR V+VFQ++NVLPP A+ISAG
Sbjct: 218 AACGTNHTVAVDSSGYVYTWGFGGYGRLGHREQKDEWQPRLVEVFQKHNVLPPNAIISAG 277

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
           + +S+CTAGGGQLYMWGKLKN GDDWMYPKPL+DLSGWN+RCM SGNMHH VGAD SCIS
Sbjct: 278 AASSACTAGGGQLYMWGKLKNTGDDWMYPKPLLDLSGWNIRCMASGNMHHVVGADDSCIS 337

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           WG AQ GELGYGP GQKSSA PKKVDILEGMHVISV CGYG S ++VDR+   +RL+Q+
Sbjct: 338 WGTAQNGELGYGPNGQKSSANPKKVDILEGMHVISVGCGYGLSAIVVDRSIASDRLNQL 396


>gi|168001938|ref|XP_001753671.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162695078|gb|EDQ81423.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 436

 Score =  550 bits (1418), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/408 (65%), Positives = 319/408 (78%), Gaps = 3/408 (0%)

Query: 7   EKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGN--LVSPTRLRPLVGVDIRFVAAG 64
           +K  EE       GELLFCGS+ W+ +G+++   DG+  L SPTRL  L GV I FVA G
Sbjct: 13  KKSQEEAKPSRPAGELLFCGSSSWETIGKKQTG-DGSTLLPSPTRLSVLQGVPIVFVAGG 71

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
             +CHC+A+D EGR YTWGRNE+GQLGHGD   R+ PTIV+ L+++K+ KA  GR+HT+V
Sbjct: 72  STACHCIALDTEGRTYTWGRNEKGQLGHGDTFTRNSPTIVASLARHKVVKAALGRTHTIV 131

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
           +T +G SL FG+NKHGQLGSGS + E E SPV+CLV E T+ +CGADFTVWLSS  G+SI
Sbjct: 132 ITAEGQSLGFGFNKHGQLGSGSCKEEFEKSPVKCLVQEATSVSCGADFTVWLSSASGSSI 191

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           L+AGLPQYGQLGHGTDNEYN K++SVKL YEAQPRPR IAA+A ++I KVACG NH+VAV
Sbjct: 192 LSAGLPQYGQLGHGTDNEYNAKEASVKLVYEAQPRPRPIAAIASKSITKVACGNNHSVAV 251

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
           DS GYVYTWGFGG+GRLGH+EQKDE++PR V+ FQR NVLP  AVI+AGS  S+ TA GG
Sbjct: 252 DSDGYVYTWGFGGHGRLGHKEQKDEFLPRLVETFQRGNVLPSTAVIAAGSAYSAATAAGG 311

Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
           QLYMWG++K  GD+WMYPKP+MDLSGWN+R +D GN      A+ SCISWG   YGELGY
Sbjct: 312 QLYMWGRVKTTGDNWMYPKPVMDLSGWNIRSLDCGNTSSIAAAEDSCISWGTGVYGELGY 371

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           GP G KSSA PKK+D LEG H ISVACG GHSL IVDR    ++L+QV
Sbjct: 372 GPTGPKSSANPKKIDALEGFHTISVACGLGHSLFIVDREKNVDKLEQV 419


>gi|10086484|gb|AAG12544.1|AC007797_4 Unknown Protein [Arabidopsis thaliana]
          Length = 521

 Score =  544 bits (1401), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 272/418 (65%), Positives = 314/418 (75%), Gaps = 64/418 (15%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           MAE       ++E+ +EKGGELLFCG+T WD +G+RKGA++GNLVSPTRLRPLVGV+IRF
Sbjct: 1   MAEAMNSSEKKDESSEEKGGELLFCGATAWDIIGKRKGAMEGNLVSPTRLRPLVGVNIRF 60

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA GC S HCVA+DVEGRCYTWGRNE+GQLGHGD IQRDRPT+VS LSK+KI KA AGR+
Sbjct: 61  VATGCASFHCVALDVEGRCYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHKIVKAAAGRN 120

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVS-EVTATACGADFTV 174
           HTVVV++DG SL FGWNK+GQLG GS +N     E+E +P+ C+VS EVT  ACGADFTV
Sbjct: 121 HTVVVSDDGQSLGFGWNKYGQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVACGADFTV 180

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           WLSS EGASIL AGLPQYGQLGHGTDNE+N KDSSV+LAYEAQPRP+AIA+LAGETIVKV
Sbjct: 181 WLSSTEGASILTAGLPQYGQLGHGTDNEFNMKDSSVRLAYEAQPRPKAIASLAGETIVKV 240

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACGTNHTV          W +               +  + ++F                
Sbjct: 241 ACGTNHTV---------FWSY---------------IKTKFNLF---------------- 260

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
                 +GGGQLYMWGK+KNNGDDWMYPKP+MDLSGWNLR MDSG+MHHFVGADSSCISW
Sbjct: 261 ----GLSGGGQLYMWGKIKNNGDDWMYPKPMMDLSGWNLRWMDSGSMHHFVGADSSCISW 316

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           GHAQYGELGYGP GQKSSA PKKVD+LEGMHV+               T++ +RL+QV
Sbjct: 317 GHAQYGELGYGPNGQKSSAAPKKVDMLEGMHVMG--------------TDIADRLEQV 360


>gi|302813443|ref|XP_002988407.1| hypothetical protein SELMODRAFT_128036 [Selaginella moellendorffii]
 gi|300143809|gb|EFJ10497.1| hypothetical protein SELMODRAFT_128036 [Selaginella moellendorffii]
          Length = 404

 Score =  510 bits (1314), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 252/413 (61%), Positives = 306/413 (74%), Gaps = 32/413 (7%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           MA    E+  E+E   ++GGELL+CG+T WD VGR++ A  G+L +PTRL PL GV I F
Sbjct: 13  MAPDAPEQQDEQE---DRGGELLYCGTTSWDTVGRKQ-ADSGSLPAPTRLSPLKGVQIAF 68

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA+G  S                            ++ ++  I     +YK+ KAG+GR 
Sbjct: 69  VASGSDSL---------------------------VREEKLEIYVLFYRYKVVKAGSGRQ 101

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           HTVV+T+DGNS AFG+NKHGQLGSG +++E+E  P++CLVSE T  +CGADFTVWLSSVE
Sbjct: 102 HTVVITDDGNSFAFGFNKHGQLGSGHVKDEVEKLPLKCLVSEATHVSCGADFTVWLSSVE 161

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           GASIL AGLPQYGQLGHGTDNEYN K+ SVKLAYEAQ RPR +AA + + + KVACG NH
Sbjct: 162 GASILTAGLPQYGQLGHGTDNEYNMKEGSVKLAYEAQSRPRPVAAFSEKMVTKVACGHNH 221

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA DS G+VYTWG+GGYGRLGH+EQKDEW PR V+VFQR NVLPP AV++AG+  S+CT
Sbjct: 222 TVASDSNGFVYTWGYGGYGRLGHKEQKDEWTPRLVEVFQRQNVLPPTAVVAAGAAFSACT 281

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           AGGGQLYMWG++K  GD+WMYPKPL DL+GW +R MDSGN    V A++SCISWG A  G
Sbjct: 282 AGGGQLYMWGRVKATGDNWMYPKPLTDLNGWTIRSMDSGNTISMVAAETSCISWGTAFSG 341

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG-ERLDQV 412
           ELGYGP G KSSA PKK+D LEGMHVISVACG  HS++IV R+  G ERL++V
Sbjct: 342 ELGYGPSGPKSSANPKKIDSLEGMHVISVACGLAHSMMIVSRSKDGAERLEEV 394


>gi|302794490|ref|XP_002979009.1| hypothetical protein SELMODRAFT_109857 [Selaginella moellendorffii]
 gi|300153327|gb|EFJ19966.1| hypothetical protein SELMODRAFT_109857 [Selaginella moellendorffii]
          Length = 404

 Score =  508 bits (1307), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 250/413 (60%), Positives = 305/413 (73%), Gaps = 32/413 (7%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           MA    E+  E+E   ++GGELL+CG+T WD VGR++ A  G+L +PTRL PL GV I F
Sbjct: 13  MAPDAPEQQDEQE---DRGGELLYCGTTSWDTVGRKQ-ADSGSLPAPTRLSPLKGVQIAF 68

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA+G  S                            ++ ++  I     +YK+ KAG+GR 
Sbjct: 69  VASGSDSL---------------------------VREEKLEIYVLFYRYKVVKAGSGRQ 101

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           HTVV+T+DGNS AFG+NKHGQLGSG +++E+E  P++CLVSE T  +CGADFTVWLSSVE
Sbjct: 102 HTVVITDDGNSFAFGFNKHGQLGSGHVKDEVEKLPLKCLVSEATHVSCGADFTVWLSSVE 161

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G SIL AGLPQYGQLGHGTDNEYN K+ SVKLAYEAQ +PR +AA + + + KVACG NH
Sbjct: 162 GTSILTAGLPQYGQLGHGTDNEYNMKEGSVKLAYEAQSKPRPVAAFSEKMVTKVACGHNH 221

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA DS G+VYTWG+GGYGRLGH+EQKDEW PR V+VFQR NVLPP AV++AG+  S+CT
Sbjct: 222 TVASDSNGFVYTWGYGGYGRLGHKEQKDEWTPRLVEVFQRQNVLPPTAVVAAGAAFSACT 281

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           AGGGQLYMWG++K  GD+WMYPKPL DL+GW +R MDSGN    V A++SCISWG A  G
Sbjct: 282 AGGGQLYMWGRVKATGDNWMYPKPLTDLNGWTIRSMDSGNTISMVAAETSCISWGTAFSG 341

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG-ERLDQV 412
           ELGYGP G KSSA PKK+D LEGMHVISVACG  HS++IV R+  G ERL++V
Sbjct: 342 ELGYGPSGPKSSANPKKIDSLEGMHVISVACGLAHSMMIVSRSKDGAERLEEV 394


>gi|449477047|ref|XP_004154913.1| PREDICTED: protein RCC2-like [Cucumis sativus]
          Length = 366

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 186/212 (87%), Positives = 201/212 (94%)

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
           N YNTKDSSV+LAYEAQPRPRAIA+LAGE IVKVACGTNHTVAVDS G+VYTWGFGGYGR
Sbjct: 25  NLYNTKDSSVRLAYEAQPRPRAIASLAGEKIVKVACGTNHTVAVDSNGFVYTWGFGGYGR 84

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
           LGH+EQKDEW PRRVD+FQR N LPP+A+ISAGSVNSSCTAGGGQLYMWGK+KN GDDWM
Sbjct: 85  LGHKEQKDEWAPRRVDIFQRRNTLPPDAIISAGSVNSSCTAGGGQLYMWGKIKNAGDDWM 144

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           YPKPLMDLSGWN+RCMDSGNMHHFVGAD+SCISWGHAQYGELGYGP GQKSSA+PKKVDI
Sbjct: 145 YPKPLMDLSGWNIRCMDSGNMHHFVGADNSCISWGHAQYGELGYGPMGQKSSALPKKVDI 204

Query: 381 LEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           LE MHVISVACG GHS+V+VDRTNV +RLDQ+
Sbjct: 205 LENMHVISVACGAGHSMVVVDRTNVADRLDQL 236



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 22/188 (11%)

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           RP  ++ L+  KI K   G +HTV V  +G    +G+  +G+LG    ++E  P  V   
Sbjct: 43  RPRAIASLAGEKIVKVACGTNHTVAVDSNGFVYTWGFGGYGRLGHKEQKDEWAPRRVDIF 102

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
               T      D  +   SV  +     G L  +G++ +  D+                 
Sbjct: 103 QRRNTLP---PDAIISAGSVNSSCTAGGGQLYMWGKIKNAGDDWM--------------- 144

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVD 276
            P+ +  L+G  I  +  G  H   V +     +WG   YG LG+    QK   +P++VD
Sbjct: 145 YPKPLMDLSGWNIRCMDSGNMHHF-VGADNSCISWGHAQYGELGYGPMGQKSSALPKKVD 203

Query: 277 VFQRNNVL 284
           + +  +V+
Sbjct: 204 ILENMHVI 211



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 76/200 (38%), Gaps = 44/200 (22%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV------SELSKYKI 112
           + V   C + H VAVD  G  YTWG    G+LGH ++     P  V      + L    I
Sbjct: 54  KIVKVACGTNHTVAVDSNGFVYTWGFGGYGRLGHKEQKDEWAPRRVDIFQRRNTLPPDAI 113

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--------VRCLVSEVT 164
             AG+  S        G    + W K    G     + + P P        +RC+ S   
Sbjct: 114 ISAGSVNSSCTA----GGGQLYMWGKIKNAGD----DWMYPKPLMDLSGWNIRCMDSGNM 165

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
               GAD           S ++ G  QYG+LG+G             +  ++   P+ + 
Sbjct: 166 HHFVGAD----------NSCISWGHAQYGELGYGP------------MGQKSSALPKKVD 203

Query: 225 ALAGETIVKVACGTNHTVAV 244
            L    ++ VACG  H++ V
Sbjct: 204 ILENMHVISVACGAGHSMVV 223


>gi|384254222|gb|EIE27696.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 476

 Score =  392 bits (1008), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 211/419 (50%), Positives = 272/419 (64%), Gaps = 26/419 (6%)

Query: 6   AEKMVEEETGKEKGGELLFCGSTCWDAVGR------RKGALDG--------NLVSPTRLR 51
           AE+   E +   KGGE+LF G T W  +GR      +KG  D         NLVSP RL+
Sbjct: 2   AEEKALESSSTFKGGEVLFAGGTDWGFIGRNLGGSKKKGDADDAGRAEKFPNLVSPVRLK 61

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
            L+ V ++F+AAG  SCHC+  DVEGRCYTWGRNE+GQLGHGD +QR+ PTIV  L   K
Sbjct: 62  SLLDVKVQFIAAGSASCHCIIGDVEGRCYTWGRNEKGQLGHGDLLQRNIPTIVDGLKNVK 121

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVSEVTAT 166
           I     G+ HT VV+ DG S +FG NK GQ G+G++++     E+  SPV+ LVS  TA 
Sbjct: 122 IVGGAGGKHHTTVVSSDGESYSFGSNKEGQCGTGTLKSNPKNEELLQSPVKALVSGCTAV 181

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACGA+FT+WL       + +AG PQYGQLGHGTD+EYN KDSSVK+ Y AQP P  I  L
Sbjct: 182 ACGAEFTMWLCE---GKLYSAGCPQYGQLGHGTDHEYNAKDSSVKIMYAAQPTPELIKGL 238

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
           + +TI  VACG NHT+A+D     YTWG GGYGRLGH+EQKDE+ P++V+V +    +  
Sbjct: 239 SDKTIRVVACGHNHTLALDDAAAAYTWGNGGYGRLGHKEQKDEFSPKQVEVLKGRMPVDA 298

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
            + ++ G+ +S CT  G QL  WGKLK +GD+ MYPK + +L+GW +R + +G       
Sbjct: 299 NSPVACGATSSFCTMIGEQLVSWGKLKASGDNTMYPKVVYELAGWKIRSITAGAYTFAAA 358

Query: 347 ----ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                D S I+WG AQ+GELGYGP G+KSSA P K   LEG+H   VA G G++L +VD
Sbjct: 359 ATGDTDISTITWGQAQHGELGYGPKGKKSSANPDKCMALEGVHCHQVAMGIGYALFLVD 417


>gi|255074853|ref|XP_002501101.1| predicted protein [Micromonas sp. RCC299]
 gi|226516364|gb|ACO62359.1| predicted protein, partial [Micromonas sp. RCC299]
          Length = 402

 Score =  391 bits (1004), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 207/400 (51%), Positives = 262/400 (65%), Gaps = 12/400 (3%)

Query: 16  KEKGGELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
           + + GE+LFCG T W  VGR K   +    N++ PTR+  L GV I  V  G  + HC+A
Sbjct: 4   QPEAGEVLFCGMTDWKQVGRGKTDDEDTFPNILEPTRIATLKGVSIAKVCGGSAATHCMA 63

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
           +  +GR +TWGRNE GQLG GD   R  PT V  L+  K+     G+SHTVVVT DGN+ 
Sbjct: 64  IAADGRVFTWGRNETGQLGLGDVDNRAAPTEVKALAGIKVVDGSCGKSHTVVVTADGNAY 123

Query: 133 AFGWNKHGQLGSGSI------RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
           A+G NKHGQLG GSI       ++    PV+C VS   A ACGA+F++W+   +G  +L+
Sbjct: 124 AWGSNKHGQLGVGSIARTKPKEDDNRLVPVQCSVSACVAVACGAEFSMWICGDDG-KLLS 182

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
           AGLPQYGQLGHGTD EYN   SSVKLAYEAQP+P  IAALAG  I KVA G NHT+AVD 
Sbjct: 183 AGLPQYGQLGHGTDGEYNMATSSVKLAYEAQPQPLPIAALAGRKITKVASGHNHTIAVDD 242

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQ 305
           +G  +TWGFGGYGRLGH+ QKDEW P+ V++   + N+ PP+ V++AG   S  TA  GQ
Sbjct: 243 QGKFHTWGFGGYGRLGHKVQKDEWTPKMVEIQGGDRNLCPPDCVVAAGQTTSWVTALMGQ 302

Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH-AQYGELGY 364
           +Y +G+LK  GD+ MYP P +DL GW LR +  G   +    +   I+WG  A  GELGY
Sbjct: 303 MYCFGRLKTTGDNTMYPVPFLDLQGWRLRSVACGATTYAACGEDQAITWGQGAGCGELGY 362

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GP G KSSA PK V+ L G HVI VACG GH+L ++  ++
Sbjct: 363 GPEGPKSSANPKLVESLGGKHVIQVACGVGHTLFLIKPSD 402


>gi|147828225|emb|CAN71115.1| hypothetical protein VITISV_033889 [Vitis vinifera]
          Length = 445

 Score =  386 bits (991), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 206/337 (61%), Positives = 234/337 (69%), Gaps = 71/337 (21%)

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
           +RGQLGHGDK+QRDRPT VSELSKYKI +AG+GRSH+VVV+EDG SLAFGWNKHGQLGSG
Sbjct: 4   QRGQLGHGDKLQRDRPTFVSELSKYKIIRAGSGRSHSVVVSEDGQSLAFGWNKHGQLGSG 63

Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           S++NE+E SPVRCLVSEV   ACGA+FTVWLSS EGASIL  GLPQYGQLGHGTDNE +T
Sbjct: 64  SVKNEVELSPVRCLVSEVKTVACGAEFTVWLSSAEGASIL-YGLPQYGQLGHGTDNEVDT 122

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF--------GG 257
                             A+L  + ++    G+    + D    +Y W          G 
Sbjct: 123 ------------------ASL--DMVMDAGHGSLAKFSPDDMA-LYLWFLCFMKFILAGK 161

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
             RLGHREQKDEWVPRRV+VFQR NVLPPEAVISAGSVNSSCTAGGGQLYMWGK+K  GD
Sbjct: 162 MFRLGHREQKDEWVPRRVEVFQRQNVLPPEAVISAGSVNSSCTAGGGQLYMWGKIKITGD 221

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           DWMYPKPLMDL                                         +SSA+PKK
Sbjct: 222 DWMYPKPLMDL-----------------------------------------RSSAVPKK 240

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVIL 414
           VDILEGMHVI+VACG+G+S+V+VDRTNVG+RLDQVIL
Sbjct: 241 VDILEGMHVITVACGFGNSMVVVDRTNVGDRLDQVIL 277


>gi|307103665|gb|EFN51923.1| hypothetical protein CHLNCDRAFT_139571 [Chlorella variabilis]
          Length = 470

 Score =  367 bits (941), Expect = 8e-99,   Method: Compositional matrix adjust.
 Identities = 196/408 (48%), Positives = 252/408 (61%), Gaps = 30/408 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALD--GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           G LL CG+T +  +GR K       NL  P RL+ L GV + F+AAG  +CH +  DV G
Sbjct: 14  GTLLVCGATDFYGIGRTKEVRPEYPNLSVPHRLKALEGVKVAFIAAGSSACHSIIGDVNG 73

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            CYTWGRNE+GQLG GD I R+ PT+V  L   KI    AG+SH+ VVT  G S  FG N
Sbjct: 74  VCYTWGRNEKGQLGLGDTINRNNPTVVEGLRNKKIVAGSAGKSHSAVVTATGESYTFGLN 133

Query: 138 KHGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
           ++GQLG+G ++      ++  +P   LVS+     CG DFT+WL       + +AG PQY
Sbjct: 134 QYGQLGTGQVKKLKGAEDMSLTPQLALVSKCGKVGCGVDFTMWLCD---GKLWSAGCPQY 190

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLGHGTD+ YN  DSSVK+ +E QP+PR IA+LA +T+ +VA G NHT+AV S G V+T
Sbjct: 191 GQLGHGTDHSYNAADSSVKMVFEPQPQPRIIASLAEKTVTQVAVGYNHTIAVCSDGGVWT 250

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           WGFGGYGRLGH+ Q+DE+ PR ++       +P  AV++AG   S CT  GGQL+ WGKL
Sbjct: 251 WGFGGYGRLGHKVQQDEFKPRLIEALTGRITVPANAVVAAGQTASFCTIVGGQLFAWGKL 310

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV----GADSSCISWGHAQ-YGELGYGPY 367
           K +GD+ MYP P   LSGWN+R +  G+         GA+ S I+WGH+  Y ELGYGP 
Sbjct: 311 KPSGDNLMYPVPYEGLSGWNIRSLTCGSSTFACAATYGAEKSTITWGHSNGYSELGYGPA 370

Query: 368 GQKSSAMPKKVDILEGMHVIS---------------VACGYGHSLVIV 400
           G+KSSA P K   LEG   +                VA G+GHSL +V
Sbjct: 371 GKKSSANPDKCMALEGAQTLQARLAAGRWPRSRRQGVAMGFGHSLFLV 418


>gi|145355761|ref|XP_001422119.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144582359|gb|ABP00436.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 399

 Score =  358 bits (918), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 188/399 (47%), Positives = 251/399 (62%), Gaps = 16/399 (4%)

Query: 21  ELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           ELL+CG+T + +VGR+K    G   +LV P R   L       VA G  + HC A+D EG
Sbjct: 1   ELLYCGATDFASVGRQKTNESGAHADLVEPHRYATLADKTWTRVAGGAAATHCAAIDDEG 60

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           R YTWGRNERGQLGHGD + R  PT V  L + +   A  G+ HTVVV E+G+   FG N
Sbjct: 61  RLYTWGRNERGQLGHGDYVSRGTPTRVEALGETRCASAACGKGHTVVVCENGDVYGFGSN 120

Query: 138 KHGQLGSGSIRNEIEP--------SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
           K GQLG G+++ +++         +PV+ LV+   + +CGA+FT  ++      +   GL
Sbjct: 121 KFGQLGCGTMKKQMKKGDAEDDKLTPVKALVTNGKSASCGAEFTAVVT--RDGEVFTYGL 178

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTVAVDSK 247
           PQYGQLGHGTD+EYNT  SS+K+ YE QP P+ + A       IVK+ACGTNH    D  
Sbjct: 179 PQYGQLGHGTDHEYNTSASSIKIVYEPQPHPKRVVANGFGERKIVKLACGTNHVACFDDA 238

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQL 306
           G ++TWG GGYGRLGHR QKDE+ P+ V++   + N++P +AV+ AGS ++  +A  GQ+
Sbjct: 239 GKIWTWGNGGYGRLGHRVQKDEFAPKMVEIQGGDRNLVPADAVLGAGSTSTFVSALQGQM 298

Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
           Y +GKLK  GD+ MYP PLMDL GW LR    G++     A+ S ++WG   YGELGYGP
Sbjct: 299 YAFGKLKTTGDNTMYPVPLMDLQGWVLRDFACGSVTFAGCAEKSAVTWGGGAYGELGYGP 358

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+KSSA P  V  LEG     VACG G++L +VD+ + 
Sbjct: 359 KGKKSSANPDLVPSLEGKTTRRVACGNGYTLFLVDKEDA 397


>gi|159486187|ref|XP_001701125.1| hypothetical protein CHLREDRAFT_194222 [Chlamydomonas reinhardtii]
 gi|158272019|gb|EDO97827.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 463

 Score =  353 bits (907), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 186/406 (45%), Positives = 252/406 (62%), Gaps = 21/406 (5%)

Query: 13  ETGKEKGGELLFCGSTCWDAVGR-----RKGALDG-----NLVSPTRLRPLVGVDIRFVA 62
           E  K +GG LLFCG T +  +GR     RK  LD      NL+ PTRL+    V I F+A
Sbjct: 7   EEPKWEGGVLLFCGGTDFAQLGRTGGKTRKEDLDKESQYPNLLRPTRLKTFNDVKIMFIA 66

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           AG  +CHC A D EG  Y+WGRNERGQLGHGD  QR+ PT V+ L+ + +  A  G++H+
Sbjct: 67  AGPAACHCFAGDSEGNLYSWGRNERGQLGHGDFAQRNVPTKVAALTGHFVIGASGGKNHS 126

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSI-------RNEIEPSPVRCLVSEVTATACGADFTVW 175
             VT DG++ A+G N HGQ G+G +       + +I  +P RC++      ACG DFT+W
Sbjct: 127 AAVTRDGSAYAWGINAHGQCGTGRVSAAKAPFKEDIVLNPTRCIIENCQQVACGIDFTLW 186

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L       I+ AG  QYG LG G D+ YN KDSS+++ +EA   P  +A L    ++++A
Sbjct: 187 LCD---GKIMAAGNGQYGVLGDGVDHSYNAKDSSIQILFEAVATPHRVAGLDDVKVLRIA 243

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G NH +A D +G  Y+WG GGYGRLGH+ Q+DE  PR+++VF R N++P  A+++AG  
Sbjct: 244 AGHNHCLAYDDQGSAYSWGNGGYGRLGHKIQQDEDKPRKLEVFTRRNLVPHNAILAAGGT 303

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
           +S CT    Q++ WGKLK NGD+ MYP P+ DL GWN+R    G       AD++ I+WG
Sbjct: 304 SSFCTGVANQVHCWGKLKVNGDNQMYPVPVNDLVGWNVRSFACGPGTFAAAADNAVITWG 363

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            A  GELG+GP  +KSSA P K + LEG H   VACG G ++ +VD
Sbjct: 364 AATNGELGFGP-NKKSSANPAKCEPLEGGHTHQVACGIGFTMFLVD 408


>gi|308813660|ref|XP_003084136.1| regulator of chromosome condensation (ISS) [Ostreococcus tauri]
 gi|116056019|emb|CAL58552.1| regulator of chromosome condensation (ISS) [Ostreococcus tauri]
          Length = 484

 Score =  352 bits (903), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 187/404 (46%), Positives = 249/404 (61%), Gaps = 22/404 (5%)

Query: 20  GELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVA--AGCVSCHCVAVD 74
           GEL + G+T +  VGR K   DG   +L  P     L   D+RFVA   G  + HC A+D
Sbjct: 52  GELAYAGATDYARVGRGKTNPDGHRPDLTEPHAYEALR--DVRFVALGGGAAATHCAAID 109

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSL 132
            EGR +TWGRNERGQLGHGD+  R  PT V  L +  +K      G+SHT VV  +G+  
Sbjct: 110 SEGRLWTWGRNERGQLGHGDRTTRGAPTEVRALRELDVKCVSVACGKSHTAVVCSNGDVY 169

Query: 133 AFGWNKHGQLGSGSIRNEIEP--------SPVRCLVSEVTATACGADFTVWLSSVEGASI 184
            FG NK GQ+G G+++  ++         +PV+ LV+   + +CG +FT  L+      +
Sbjct: 170 GFGSNKQGQIGCGTMKKVMKKGDAEDDKLTPVKALVANGASVSCGGEFTAVLT--RDGEV 227

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGETIVKVACGTNHTV 242
              GLPQYGQLGHGTD+EYNT  SS+K+ YE QP P+ + A       IVK++CG NH  
Sbjct: 228 FTYGLPQYGQLGHGTDHEYNTSASSIKIVYEPQPHPKRVVANGFGERKIVKLSCGVNHVA 287

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTA 301
             D  G ++TWGFGGYGRLGHR QKDE+ P+ V++   + N+ P +AVI AGS ++  +A
Sbjct: 288 CFDDAGKIWTWGFGGYGRLGHRVQKDEFAPKMVEIQGGDRNLCPADAVIGAGSTSTFVSA 347

Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
             GQLY +GK+K  GD+ MYP P MDL GW LR   +GN+     A+ S ++WG  QYGE
Sbjct: 348 LQGQLYAFGKIKTTGDNLMYPTPFMDLQGWVLRDFSAGNVTFAACAEKSAVTWGGGQYGE 407

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           LGYGP G+KSSA P  V  LEG    +VACG G++L +VD+ + 
Sbjct: 408 LGYGPKGKKSSANPDLVPSLEGKRTYAVACGVGYTLFLVDKEDA 451


>gi|302830842|ref|XP_002946987.1| hypothetical protein VOLCADRAFT_79393 [Volvox carteri f.
           nagariensis]
 gi|300268031|gb|EFJ52213.1| hypothetical protein VOLCADRAFT_79393 [Volvox carteri f.
           nagariensis]
          Length = 417

 Score =  314 bits (805), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 160/351 (45%), Positives = 221/351 (62%), Gaps = 9/351 (2%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           V + F+AAG  +CHC   D  G  ++WGRNE+GQLGHGD  QR+ P  V+ L    +  A
Sbjct: 13  VKVMFIAAGPAACHCFVGDSAGNLWSWGRNEKGQLGHGDFAQRNVPAKVAGLDGKFVIGA 72

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGA 170
             GR+H+  V +DG+S A+G N+H  +      N     +I  +P RC++   T  ACG 
Sbjct: 73  SGGRNHSACVCQDGSSYAWGINQHVDVACLFSLNVPLGADIILTPTRCVIENCTQVACGI 132

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           DFT+WL    G  ++ AG  QYG +G G D+ YN KDSS+++ YEA   PR +A L   T
Sbjct: 133 DFTMWLC---GGRVMTAGNGQYGVIGDGVDHSYNAKDSSIQILYEAVATPRRVAGLDDVT 189

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           ++K+A G NH +  D +G  Y+WG GGYGRLGH+ Q+DE  PR+++VF R N++P +A++
Sbjct: 190 VLKIAAGHNHCLCYDDQGSCYSWGNGGYGRLGHKIQQDEDKPRKIEVFTRRNLVPKDAIL 249

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
           +AG  +S CT   GQ++ WGKLK NGD+ MYP P+ DL GWN+R    G       AD+S
Sbjct: 250 AAGGTSSFCTGVAGQVHCWGKLKVNGDNQMYPVPVNDLVGWNVRSFACGPGTFAAAADNS 309

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            I+WG A  GELG+GP  +KSSA P K + L+G +   VACG G +L +VD
Sbjct: 310 VITWGAATNGELGFGP-NKKSSANPAKCEPLDGGYTHQVACGIGFTLFLVD 359


>gi|260841550|ref|XP_002613975.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
 gi|229299365|gb|EEN69984.1| hypothetical protein BRAFLDRAFT_67459 [Branchiostoma floridae]
          Length = 484

 Score =  311 bits (798), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 177/421 (42%), Positives = 247/421 (58%), Gaps = 35/421 (8%)

Query: 6   AEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDG--------NLVSPTRLRPLVGVD 57
           A+K   +  G +  GELL CG T WD +GR +   +         NL  P R   + GV 
Sbjct: 53  ADKPPLKLEGSKVAGELLICGGTNWDLIGRNQLPKNATGSANRGQNLWGPHRYGSMSGVR 112

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R V +G  S H + +  +G+  +WGRN++GQLGHGD  + D PT++  L+ + I +A  
Sbjct: 113 VRSVISGPTSVHSILITEDGKAMSWGRNDKGQLGHGDTKRVDVPTVIESLAGFNIVEAAC 172

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVW 175
           GR+HT+ +T+DG   AFG NK GQLG G+  N   PSP + + +   V   ACGA+F++ 
Sbjct: 173 GRNHTLCLTDDGKVFAFGENKMGQLGLGN-ENAAVPSPTQIVYTGPPVVKVACGAEFSMV 231

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET----- 230
           +      ++ + G P+YGQLG+ TD +Y    +S K+AY+ +  PR I+    +T     
Sbjct: 232 IDCR--GALYSFGCPEYGQLGNNTDGQYFV--TSNKMAYDCELVPRRISVFIEKTKDGFI 287

Query: 231 -------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  +V + CGTNHTVA+D +  V+TWGFGGYGRLGH EQKDE VPR V +F     
Sbjct: 288 NPITNVQLVDIKCGTNHTVALDKQKRVFTWGFGGYGRLGHSEQKDEHVPRLVKMFD---- 343

Query: 284 LPPEA--VISAGSVNS-SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
            P      I AG+  S      GGQLY+WG+ K  G+  MYPKP+ DLSGW++R +   N
Sbjct: 344 YPGRGARTIYAGAFYSMGIMDNGGQLYLWGQTKTTGEANMYPKPVQDLSGWDVRSVGCSN 403

Query: 341 MHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               V AD S ISWG +  YGELGYG    KSS +PK+V  L+G+++  V+CGYGH++ I
Sbjct: 404 RSIVVAADESTISWGPSPTYGELGYGENKAKSSTIPKEVKTLDGIYIHKVSCGYGHTIFI 463

Query: 400 V 400
            
Sbjct: 464 A 464



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG--NMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
           N G +   P     +SG  +R + SG  ++H   +  D   +SWG    G+LG+G    K
Sbjct: 94  NRGQNLWGPHRYGSMSGVRVRSVISGPTSVHSILITEDGKAMSWGRNDKGQLGHG--DTK 151

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +P  ++ L G +++  ACG  H+L + D   V
Sbjct: 152 RVDVPTVIESLAGFNIVEAACGRNHTLCLTDDGKV 186


>gi|303290458|ref|XP_003064516.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226454114|gb|EEH51421.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 361

 Score =  307 bits (787), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 169/323 (52%), Positives = 217/323 (67%), Gaps = 10/323 (3%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSLA 133
           +GR + WGRNE GQLG GD + R  PT++ EL     K      G+ HTV++ E G + A
Sbjct: 24  DGRVFAWGRNENGQLGLGDTVDRGIPTVIKELQDKGAKAIDGACGKHHTVILCEGGVTYA 83

Query: 134 FGWNKHGQLGSGSI-----RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           FG NKHGQLG G+I      +++  +PV+  V+  TA ACG +FT+W++   GA + +AG
Sbjct: 84  FGSNKHGQLGIGTIARKAREDDVRTTPVQTQVANATAVACGGEFTMWIAGENGA-LYSAG 142

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
           LPQYGQLGHG+D+EYN K+ SVKLAY+ QP PRAIAAL+ + I++VACG NHT+ VDS G
Sbjct: 143 LPQYGQLGHGSDHEYNMKEGSVKLAYQPQPSPRAIAALSDKKIIRVACGHNHTICVDSVG 202

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLPPEAVISAGSVNSSCTAGGGQLY 307
            VYTWGFGGYGRLGH+ QKDE+ P++V+V   + N+ PP+ V++AGSV S  TA  GQ+Y
Sbjct: 203 KVYTWGFGGYGRLGHKVQKDEFAPKQVEVQGGDRNLCPPDCVVAAGSVTSWFTALMGQMY 262

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW-GHAQYGELGYGP 366
            +GKLK NGD+ MYP P +DL GWNLR +  G        +   I+W      GELGYG 
Sbjct: 263 CFGKLKTNGDNTMYPIPFLDLQGWNLRSVACGATTFAACGEREAITWGQGGGNGELGYGA 322

Query: 367 YGQKSSAMPKKVDILEGMHVISV 389
            G KSSA PK VD L G  V  V
Sbjct: 323 SGPKSSANPKLVDSLSGKMVHRV 345



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 25/187 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---KIQRD--RP 101
           PT ++ L     + +   C   H V +   G  Y +G N+ GQLG G    K + D  R 
Sbjct: 49  PTVIKELQDKGAKAIDGACGKHHTVILCEGGVTYAFGSNKHGQLGIGTIARKAREDDVRT 108

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS------------IRN 149
           T V          A  G     +  E+G   + G  ++GQLG GS            +  
Sbjct: 109 TPVQTQVANATAVACGGEFTMWIAGENGALYSAGLPQYGQLGHGSDHEYNMKEGSVKLAY 168

Query: 150 EIEPSPVRCLVS----EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYN 204
           + +PSP R + +    ++   ACG + T+ + SV    +   G   YG+LGH    +E+ 
Sbjct: 169 QPQPSP-RAIAALSDKKIIRVACGHNHTICVDSV--GKVYTWGFGGYGRLGHKVQKDEFA 225

Query: 205 TKDSSVK 211
            K   V+
Sbjct: 226 PKQVEVQ 232



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 65/191 (34%), Gaps = 70/191 (36%)

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-------HREQKDEWVPRRVDVFQR 280
           G   +  ACG +HTV +   G  Y +G   +G+LG        RE      P +  V   
Sbjct: 59  GAKAIDGACGKHHTVILCEGGVTYAFGSNKHGQLGIGTIARKAREDDVRTTPVQTQV--- 115

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
                          N++  A GG+  MW                               
Sbjct: 116 --------------ANATAVACGGEFTMW------------------------------- 130

Query: 341 MHHFVGADSSCISWGHAQYGELGYGP---YGQKSSAM---------PKKVDILEGMHVIS 388
                G + +  S G  QYG+LG+G    Y  K  ++         P+ +  L    +I 
Sbjct: 131 ---IAGENGALYSAGLPQYGQLGHGSDHEYNMKEGSVKLAYQPQPSPRAIAALSDKKIIR 187

Query: 389 VACGYGHSLVI 399
           VACG+ H++ +
Sbjct: 188 VACGHNHTICV 198


>gi|291235191|ref|XP_002737524.1| PREDICTED: CG9135-like [Saccoglossus kowalevskii]
          Length = 483

 Score =  303 bits (776), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 168/418 (40%), Positives = 235/418 (56%), Gaps = 28/418 (6%)

Query: 5   EAEKMVEEETGKEKGGELLFCGSTCWDAVGRR---------KGALDGNLVSPTRLRPLVG 55
           + E+M     G +  G+LLFCG T WD +GR          K     NL  P  +  +  
Sbjct: 49  KEERMKIRLEGSKTSGDLLFCGGTNWDLIGRASLPKAAAGVKPQGGRNLWGPHHITSIGK 108

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           + IR V +G  +CH + +  +G+  +WGRN+R QLGHGD ++RD PT++  L ++ I  A
Sbjct: 109 IRIRSVISGPTACHSIIITEDGKAMSWGRNDREQLGHGDNVRRDNPTLIESLKEHNIVSA 168

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTV 174
             GR+HT+ +TE G   AFG N++GQLG G     +  P  V      +   ACGADF++
Sbjct: 169 ACGRNHTLCLTEYGTVFAFGDNRYGQLGIGLQSASVGNPVKVGHKGQPIVKVACGADFSM 228

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET---- 230
            L      S+ + G P+Y QLGH  D +Y    +S KL+++ Q  PR I     +     
Sbjct: 229 ILDC--KGSLHSFGHPEYSQLGHNNDGQYFV--TSNKLSFDCQLVPRKIQMFVEKNKGHV 284

Query: 231 -------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  +  VACGTNH +A+D +  V+TWGFGGYGRLGH E KDE VPR +  F     
Sbjct: 285 MPVPNVLLTDVACGTNHVIALDIRKRVFTWGFGGYGRLGHAEPKDEKVPRNLKTFDVTGR 344

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
               + I  G+  S   +  G LY WG+ K  G+  MYPKP+ DL+GW +R +   N   
Sbjct: 345 --GASSIYCGASFSMAVSEQGILYFWGQTKTTGEATMYPKPVQDLTGWKIRSVGCSNHSI 402

Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            + AD S ISWG +  YGELGYG +G KSS  PK++ +L+G+++ SVACGYGH+L+I 
Sbjct: 403 VIAADDSVISWGPSPTYGELGYGDHGAKSSTQPKEIKLLDGINIHSVACGYGHTLMIA 460


>gi|449527695|ref|XP_004170845.1| PREDICTED: protein RCC2 homolog, partial [Cucumis sativus]
          Length = 186

 Score =  299 bits (765), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 138/166 (83%), Positives = 155/166 (93%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GELLFCG+T WD +GR+KG ++GNLVSPTRLRPLVG+DIRFVA+GC SCHCVA+DVEGRC
Sbjct: 21  GELLFCGATSWDIIGRKKGPVEGNLVSPTRLRPLVGIDIRFVASGCTSCHCVALDVEGRC 80

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           YTWGRNE+GQLGHGD IQRDRPTIVS+LSKYK+ KAGAGR+HTVVVTEDGNSL+FGWNKH
Sbjct: 81  YTWGRNEKGQLGHGDLIQRDRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKH 140

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
           GQLGSGSI+NEIE SPVRCLVSEV  TACG +FT WL+S+EGASIL
Sbjct: 141 GQLGSGSIKNEIESSPVRCLVSEVKTTACGGEFTAWLTSIEGASIL 186



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 54/124 (43%), Gaps = 19/124 (15%)

Query: 149 NEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           N + P+ +R LV       A+ C +   V L  VEG      G  + GQLGHG       
Sbjct: 44  NLVSPTRLRPLVGIDIRFVASGCTSCHCVALD-VEG-RCYTWGRNEKGQLGHGD------ 95

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                      + RP  ++ L+   +VK   G NHTV V   G   ++G+  +G+LG   
Sbjct: 96  --------LIQRDRPTIVSDLSKYKVVKAGAGRNHTVVVTEDGNSLSFGWNKHGQLGSGS 147

Query: 266 QKDE 269
            K+E
Sbjct: 148 IKNE 151


>gi|424513123|emb|CCO66707.1| predicted protein [Bathycoccus prasinos]
          Length = 472

 Score =  296 bits (758), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 179/422 (42%), Positives = 238/422 (56%), Gaps = 37/422 (8%)

Query: 20  GELLFCGSTCWDAVGRRKG---ALDGNLVSPTRLRPLVG---VDIRFVAAGCVSCHCVAV 73
           G +LFCG T +  VGR K    ++  N+  P+++        ++  F+A+G  + H VA+
Sbjct: 20  GAILFCGCTDFKNVGRTKQIDESVFANVNVPSKISTFENENDLEFTFIASGSAAAHNVAI 79

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-----------SKYKIKKAGAGRSHT 122
           D +GR + WGRNE GQLG GDK  R+ P++V  +              KI  A  G++HT
Sbjct: 80  DTKGRLWAWGRNENGQLGTGDKDNRNAPSVVKGIHFGENADGEGEEAVKIVWAACGKNHT 139

Query: 123 VVVTEDGNSLAFGWNKHGQLGS-----------GSIRNEIEPSPVRCLVSEVTATACGAD 171
           + +  +G   A G NK GQLG               R E   S        V AT CG D
Sbjct: 140 IAIDSEGGFYACGSNKSGQLGVPITWSRQKKNVDDERVEFVKSASATQAKFVKAT-CGVD 198

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA--LAGE 229
           FTV L+  +G  + + G PQYGQLGHG D+EYN K+ +VKLAYE QP P+ I +  L  E
Sbjct: 199 FTV-LTDADG-KMWSFGCPQYGQLGHGDDHEYNMKEGTVKLAYEPQPTPKMIRSGDLNAE 256

Query: 230 T---IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN-NVLP 285
               +VKV CG NH       G +YTWG GGYGRLGHR QKDE+ P+ V+V   + N++P
Sbjct: 257 KDYKVVKVCCGHNHVACFCEDGKLYTWGNGGYGRLGHRVQKDEFSPKMVEVQGGDRNLIP 316

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
            +A+++ GS  +  +A  GQLY +GKLK +GD+ MYP P MDL GW LR   SG +    
Sbjct: 317 KDAILACGSTATHFSACMGQLYAFGKLKVSGDNTMYPMPQMDLQGWVLRDFASGAVTFAT 376

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             D   ++WG   YGELGYGP G+KSSA P  V  L+G   I VACG G +L +V   +V
Sbjct: 377 CQDEMTVTWGAGGYGELGYGPEGKKSSACPDVVPSLQGKRTIMVACGLGQTLFLVKSEDV 436

Query: 406 GE 407
            E
Sbjct: 437 KE 438


>gi|156403119|ref|XP_001639937.1| predicted protein [Nematostella vectensis]
 gi|156227068|gb|EDO47874.1| predicted protein [Nematostella vectensis]
          Length = 487

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 172/419 (41%), Positives = 238/419 (56%), Gaps = 38/419 (9%)

Query: 20  GELLFCGSTCWDAVGRR---KGALD---GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV 73
           G LL CG T WD +GR+   K A +    NL  P  +  L G+ +R  A+G  +CH + V
Sbjct: 69  GTLLICGGTNWDLIGRKELPKSAKNYGGPNLWEPHLISTLSGIRVRHAASGPSACHSIIV 128

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
             +GR  ++GRN++GQLGHG   + D P ++  L  + I +A  GR HT+++T+ G    
Sbjct: 129 CEDGRVMSFGRNDKGQLGHGTTERCDVPKVIDRLKMHNIVQASCGRGHTLILTDAGLVFG 188

Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLP 190
           FG NK GQ+G G  +    P P++ +     +VT   CGA+F++ L   E   I + G P
Sbjct: 189 FGDNKLGQIGQGHQKPTSLPCPLQIMHPTDKKVTKVCCGAEFSMLLD--ENGDIFSFGSP 246

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA------------LAGETIVKVACGT 238
           +YGQLGH TD +Y    SS K+ ++ +  PR +              + G  I  V CG 
Sbjct: 247 EYGQLGHNTDGQYIV--SSNKMGFQCEVLPRRLVVFVERNKDGFVNHIEGVKIKDVVCGN 304

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
           NHT+A+D +G V+TWGFGGYGRLGH++ KDE VPR +  F   N     +VI AGS  S 
Sbjct: 305 NHTMALDEQGRVFTWGFGGYGRLGHQQPKDEHVPRLLTFF---NTKGNPSVIFAGSTYSM 361

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
                GQLY WG+ K +G+  MYPKP+ DLSGW +R +        + AD S +SWG + 
Sbjct: 362 AVC-MGQLYFWGQTKQSGEAAMYPKPVQDLSGWQVRSVGCSKSSIVIAADDSVVSWGPSP 420

Query: 358 QYGELGYGPY--GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV------DRTNVGER 408
            YGELGYG    GQKSS  PK V+ LE ++V SV CG GH+L I       D+T +G++
Sbjct: 421 TYGELGYGLKKGGQKSSTNPKIVEPLEDIYVHSVTCGMGHTLFIAKDVTPEDKTMLGKK 479


>gi|126328935|ref|XP_001376745.1| PREDICTED: protein RCC2 [Monodelphis domestica]
          Length = 439

 Score =  283 bits (723), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 164/414 (39%), Positives = 235/414 (56%), Gaps = 34/414 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  + H +
Sbjct: 20  GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSL 79

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  LSK  I  A  GR+HT+ +TE G+ 
Sbjct: 80  LITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSV 139

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
            AFG NK GQLG G+  + I PSP + + +   +T  ACGA+F++ +      ++ + G 
Sbjct: 140 FAFGENKMGQLGLGNQTDAI-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 196

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
           P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            +  VACG
Sbjct: 197 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 254

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVISAGSV 295
           TNHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P    A I AG  
Sbjct: 255 TNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGAAQIYAGYT 310

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
            S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG
Sbjct: 311 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWG 370

Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            +  +GELGYG +  KSS   ++V  L+G++   VA GY HSLVI    +  E+
Sbjct: 371 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVIARDESEAEK 424


>gi|395529104|ref|XP_003766660.1| PREDICTED: protein RCC2-like [Sarcophilus harrisii]
          Length = 483

 Score =  282 bits (722), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 165/414 (39%), Positives = 236/414 (57%), Gaps = 34/414 (8%)

Query: 11  EEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVA 62
           E+  G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V 
Sbjct: 55  EKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRTVV 114

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LSK  I  A  GR+HT
Sbjct: 115 SGPCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLSKEVIVSAACGRNHT 174

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVE 180
           + +TE G+  AFG NK GQLG G+  + I PSP + + +   +T  ACGA+F++ +    
Sbjct: 175 LALTETGSVFAFGENKMGQLGLGNQTDAI-PSPAQIMYNGQPITKMACGAEFSMIMDC-- 231

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET---------- 230
             ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T          
Sbjct: 232 KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPN 289

Query: 231 --IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE- 287
             +  VACGTNHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P   
Sbjct: 290 VVVRDVACGTNHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRG 345

Query: 288 -AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
            A I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V 
Sbjct: 346 AAQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVA 405

Query: 347 ADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           AD S ISWG +  +GELGYG +  KSS   ++V  L+G++   VA GY HSLVI
Sbjct: 406 ADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVI 459



 Score = 39.7 bits (91), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQ 369
           +N G +   P     LSG  +R + SG        +  +    SWG  + G+LG+G    
Sbjct: 90  RNLGQNLWGPHRYGCLSGVQVRTVVSGPCAAHSLLITTEGKLWSWGRNEKGQLGHG--DT 147

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           K    PK +++L    ++S ACG  H+L + +  +V
Sbjct: 148 KRVEAPKLIEVLSKEVIVSAACGRNHTLALTETGSV 183


>gi|348570860|ref|XP_003471214.1| PREDICTED: protein RCC2-like [Cavia porcellus]
          Length = 453

 Score =  278 bits (712), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 163/421 (38%), Positives = 236/421 (56%), Gaps = 34/421 (8%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVG 55
           L+A  + E+  G +  G+LL  G+T WD +GR++          L  NL  P R   L G
Sbjct: 19  LQAPALREKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAG 78

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           V +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A
Sbjct: 79  VRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIDGLSHEVIVLA 138

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
             GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F+
Sbjct: 139 ACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 197

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
           + +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T   
Sbjct: 198 MIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDG 253

Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
                    +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F   
Sbjct: 254 QILPVPNVVVRDVACGANHTLILDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-- 311

Query: 282 NVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
              P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G
Sbjct: 312 --FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACG 369

Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLV
Sbjct: 370 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 429

Query: 399 I 399
           I
Sbjct: 430 I 430


>gi|354505309|ref|XP_003514713.1| PREDICTED: protein RCC2-like [Cricetulus griseus]
          Length = 484

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/430 (37%), Positives = 238/430 (55%), Gaps = 34/430 (7%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVG 55
           L+   ++ +  G +  G+LL  G+T WD +GR++          L  NL  P R   L G
Sbjct: 50  LKTRILLFKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSG 109

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           V +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A
Sbjct: 110 VRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLA 169

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
             GR+HT+ +T+ G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F+
Sbjct: 170 ACGRNHTLALTDTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFS 228

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
           + +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T   
Sbjct: 229 MLMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDG 284

Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
                     + VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F   
Sbjct: 285 QILPVPNVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD-- 342

Query: 282 NVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
              P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G
Sbjct: 343 --FPGRGATQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACG 400

Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLV
Sbjct: 401 KSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLV 460

Query: 399 IVDRTNVGER 408
           I    +  E+
Sbjct: 461 IARDESEAEK 470


>gi|281346734|gb|EFB22318.1| hypothetical protein PANDA_013306 [Ailuropoda melanoleuca]
          Length = 427

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/410 (39%), Positives = 231/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+ LAFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVLAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVI 404


>gi|301777289|ref|XP_002924055.1| PREDICTED: protein RCC2-like [Ailuropoda melanoleuca]
          Length = 447

 Score =  276 bits (706), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 161/410 (39%), Positives = 231/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 24  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 83

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 84  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALT 143

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+ LAFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 144 ETGSVLAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 200

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 201 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 258

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 259 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 314

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 315 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 374

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 375 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVI 424


>gi|118100936|ref|XP_417522.2| PREDICTED: protein RCC2 [Gallus gallus]
          Length = 464

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/425 (37%), Positives = 238/425 (56%), Gaps = 34/425 (8%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRF 60
           ++++  G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R 
Sbjct: 35  LLQKLEGSKCRGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVQVRS 94

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  L    I  A  GR+
Sbjct: 95  VVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAIVLAACGRN 154

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSS 178
           HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +  
Sbjct: 155 HTLALTETGSVYAFGENKMGQLGLGNQTDAV-PSPTQIMYNGQPITKMACGAEFSMIMDC 213

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-------- 230
               ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T        
Sbjct: 214 --KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPV 269

Query: 231 ----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P 
Sbjct: 270 PNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPG 325

Query: 287 E--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
              A I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     
Sbjct: 326 RGAAQIYAGYTCSFAVSETGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSII 385

Query: 345 VGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
           V AD S ISWG +  +GELGYG +  KSS   ++V  L+G++   VA GY HSLVI    
Sbjct: 386 VAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIYTEQVAMGYAHSLVIARDE 445

Query: 404 NVGER 408
           +  E+
Sbjct: 446 SDAEK 450


>gi|359319092|ref|XP_544537.3| PREDICTED: protein RCC2 [Canis lupus familiaris]
          Length = 460

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/410 (39%), Positives = 231/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 37  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 96

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 97  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALT 156

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+ LAFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 157 ETGSVLAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 213

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 214 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 271

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 272 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 327

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 328 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 387

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 388 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVI 437


>gi|410966268|ref|XP_004001548.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Felis catus]
          Length = 521

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/419 (38%), Positives = 233/419 (55%), Gaps = 34/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 98  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 157

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG  ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 158 AAHSLLITTEGTLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVIVSAACGRNHTLALT 217

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 218 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 274

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 275 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 332

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVI 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P    A I
Sbjct: 333 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGAAQI 388

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 389 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 448

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 449 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAHSLVIARDESEAEK 507


>gi|440897095|gb|ELR48863.1| Protein RCC2, partial [Bos grunniens mutus]
          Length = 427

 Score =  275 bits (704), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 162/419 (38%), Positives = 233/419 (55%), Gaps = 34/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P +V  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVIVSAACGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIARDESEAEK 413


>gi|332261039|ref|XP_003279586.1| PREDICTED: protein RCC2 [Nomascus leucogenys]
          Length = 448

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 161/415 (38%), Positives = 233/415 (56%), Gaps = 34/415 (8%)

Query: 10  VEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFV 61
           V++  G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V
Sbjct: 20  VKKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTV 79

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
            +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+H
Sbjct: 80  VSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNH 139

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSV 179
           T+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +   
Sbjct: 140 TLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC- 197

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--------- 230
              ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T         
Sbjct: 198 -KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVP 254

Query: 231 ---IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
              +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P  
Sbjct: 255 NVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGR 310

Query: 288 AV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
               I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V
Sbjct: 311 GASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIV 370

Query: 346 GADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 371 AADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 425


>gi|332801056|ref|NP_001095381.2| protein RCC2 [Bos taurus]
 gi|151554348|gb|AAI47876.1| RCC2 protein [Bos taurus]
          Length = 520

 Score =  275 bits (704), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/433 (38%), Positives = 238/433 (54%), Gaps = 34/433 (7%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 83  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P +V  LS   I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 261

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 262 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 317

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 378 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 433

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 434 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSH 493

Query: 396 SLVIVDRTNVGER 408
           SLVI    +  E+
Sbjct: 494 SLVIARDESEAEK 506


>gi|427796171|gb|JAA63537.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 550

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 165/411 (40%), Positives = 224/411 (54%), Gaps = 31/411 (7%)

Query: 20  GELLFCGSTCWDAVGRRK-------GALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCV 71
           G LLF G T WD +GRR         + + NL  P RL  P     ++ V +GC +CH V
Sbjct: 138 GTLLFSGGTNWDTIGRRPKDKQKAGASQERNLWGPHRLAWPH---RVKAVFSGCSACHTV 194

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  +G+ +TWGRN++GQLG  D  +RD PT+V  L    +  A  GR+HT+ +T+ G+ 
Sbjct: 195 LLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTLVETLKDSMVVAAACGRAHTLFLTDHGSV 254

Query: 132 LAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G GS    +  P+ V   +      +CG +F+V +       +   G P
Sbjct: 255 FACGDNKMGQCGVGSQNASVHVPTRVAFKLRPAVRVSCGGEFSVLVDCR--GHVYTFGCP 312

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGT 238
           +YGQLGH TD  Y    +S KL ++ +  PR +                   IV+VA G 
Sbjct: 313 EYGQLGHNTDGRYFV--TSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDVHIVEVASGL 370

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
           NHT+A+D +   ++WGFGGYGRLGH E KDE VPR +  F+  N       + AG   S 
Sbjct: 371 NHTIALDERKRCFSWGFGGYGRLGHNEPKDEMVPRLIKAFEGPN--RGLCSVYAGGTFSM 428

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG-HA 357
             +  G LY WG   + G+  MYPKP+ DL+GW++R +   N    V AD S ISWG H 
Sbjct: 429 AVSELGVLYFWGMNNHGGEATMYPKPIQDLTGWHIRGIGCSNKSIVVLADESVISWGPHP 488

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            YGELGYG   QKSS  P++V +LEG+HV +VACG GHS+ I    +  ER
Sbjct: 489 TYGELGYGEGRQKSSTTPQEVRLLEGIHVHAVACGLGHSVFIARDESEEER 539


>gi|148753311|gb|AAI42947.1| RCC2 protein [Homo sapiens]
          Length = 457

 Score =  275 bits (703), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 163/424 (38%), Positives = 235/424 (55%), Gaps = 34/424 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 20  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPRQQAAYRNLGQNLWGPHRYGC 79

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 80  LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 139

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 140 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 198

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 199 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 254

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 255 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 314

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 315 D----FPGRGASRIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 370

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 371 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 430

Query: 396 SLVI 399
           SLVI
Sbjct: 431 SLVI 434


>gi|392340833|ref|XP_001072061.3| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
 gi|392348476|ref|XP_216557.6| PREDICTED: LOW QUALITY PROTEIN: protein RCC2, partial [Rattus
           norvegicus]
          Length = 500

 Score =  275 bits (702), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 160/419 (38%), Positives = 233/419 (55%), Gaps = 34/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 77  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 136

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 137 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 196

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           + G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 197 DTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNL 253

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 254 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 311

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 312 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQI 367

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 368 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 427

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 428 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 486


>gi|432098051|gb|ELK27938.1| Protein RCC2, partial [Myotis davidii]
          Length = 427

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHETIVSAACGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKTVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVI 404


>gi|402853137|ref|XP_003891257.1| PREDICTED: protein RCC2 [Papio anubis]
 gi|383419997|gb|AFH33212.1| protein RCC2 [Macaca mulatta]
 gi|383419999|gb|AFH33213.1| protein RCC2 [Macaca mulatta]
 gi|384948234|gb|AFI37722.1| protein RCC2 [Macaca mulatta]
 gi|387541966|gb|AFJ71610.1| protein RCC2 [Macaca mulatta]
          Length = 523

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 86  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 146 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 205

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 264

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 265 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 320

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 321 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 381 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 436

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 437 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 496

Query: 396 SLVIV 400
           SLVI 
Sbjct: 497 SLVIA 501


>gi|431906266|gb|ELK10463.1| Protein RCC2, partial [Pteropus alecto]
          Length = 427

 Score =  275 bits (702), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKVACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGVFTEQVAMGYSHSLVI 404


>gi|355557600|gb|EHH14380.1| hypothetical protein EGK_00297, partial [Macaca mulatta]
          Length = 427

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 355 TISWGPSPTFGELGYGDHKLKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 404


>gi|417402228|gb|JAA47967.1| Hypothetical protein [Desmodus rotundus]
          Length = 520

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 83  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 202

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 261

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 262 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 317

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 378 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 433

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 434 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSH 493

Query: 396 SLVIV 400
           SLVI 
Sbjct: 494 SLVIA 498


>gi|355744958|gb|EHH49583.1| hypothetical protein EGM_00270, partial [Macaca fascicularis]
          Length = 427

 Score =  274 bits (701), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 404


>gi|148681378|gb|EDL13325.1| regulator of chromosome condensation 2 [Mus musculus]
          Length = 498

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 160/419 (38%), Positives = 233/419 (55%), Gaps = 34/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 75  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 134

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 135 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 194

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           + G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 195 DTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNL 251

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 252 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 309

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 310 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQI 365

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 366 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 425

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 426 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 484


>gi|397486789|ref|XP_003814505.1| PREDICTED: protein RCC2 [Pan paniscus]
          Length = 507

 Score =  274 bits (701), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 84  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 143

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 144 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 203

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 204 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 260

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 261 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 318

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 319 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 374

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 375 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 434

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 435 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 484


>gi|7959201|dbj|BAA95994.1| KIAA1470 protein [Homo sapiens]
          Length = 564

 Score =  274 bits (700), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 127 ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 186

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 187 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 246

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 247 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 305

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 306 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 361

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 362 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 421

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 422 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 477

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 478 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 537

Query: 396 SLVIV 400
           SLVI 
Sbjct: 538 SLVIA 542


>gi|29789090|ref|NP_061185.1| protein RCC2 [Homo sapiens]
 gi|209969703|ref|NP_001129676.1| protein RCC2 [Homo sapiens]
 gi|71152033|sp|Q9P258.2|RCC2_HUMAN RecName: Full=Protein RCC2; AltName: Full=RCC1-like protein TD-60;
           AltName: Full=Telophase disk protein of 60 kDa
 gi|27526613|emb|CAD13148.1| RCC1-like protein [Homo sapiens]
 gi|31753208|gb|AAH53908.1| RCC2 protein [Homo sapiens]
 gi|55250899|gb|AAH42141.1| Regulator of chromosome condensation 2 [Homo sapiens]
 gi|119615244|gb|EAW94838.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|119615245|gb|EAW94839.1| regulator of chromosome condensation 2, isoform CRA_a [Homo
           sapiens]
 gi|168270564|dbj|BAG10075.1| regulator of chromosome condensation 2 [synthetic construct]
 gi|410215858|gb|JAA05148.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410262104|gb|JAA19018.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410298210|gb|JAA27705.1| regulator of chromosome condensation 2 [Pan troglodytes]
 gi|410341591|gb|JAA39742.1| regulator of chromosome condensation 2 [Pan troglodytes]
          Length = 522

 Score =  274 bits (700), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 85  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 205 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 263

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 264 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 319

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 380 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 435

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 436 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 495

Query: 396 SLVIV 400
           SLVI 
Sbjct: 496 SLVIA 500


>gi|37360404|dbj|BAC98180.1| mKIAA1470 protein [Mus musculus]
          Length = 484

 Score =  274 bits (700), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 160/419 (38%), Positives = 233/419 (55%), Gaps = 34/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 61  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 120

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 121 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALT 180

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           + G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 181 DTGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNL 237

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 238 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 295

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 296 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQI 351

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 352 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 411

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 412 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 470


>gi|114554345|ref|XP_513117.2| PREDICTED: protein RCC2 [Pan troglodytes]
          Length = 488

 Score =  273 bits (699), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 65  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 124

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 125 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 184

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 185 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 241

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 242 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 299

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 300 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 355

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 356 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 415

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 416 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 465


>gi|395821141|ref|XP_003783906.1| PREDICTED: protein RCC2 [Otolemur garnettii]
          Length = 522

 Score =  273 bits (699), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 163/425 (38%), Positives = 235/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 85  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 144

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 145 LAGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVI 204

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 205 VLAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 263

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 264 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 319

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 320 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 379

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 380 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 435

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 436 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSH 495

Query: 396 SLVIV 400
           SLVI 
Sbjct: 496 SLVIA 500


>gi|426222850|ref|XP_004005595.1| PREDICTED: protein RCC2 [Ovis aries]
          Length = 655

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 161/419 (38%), Positives = 233/419 (55%), Gaps = 34/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 232 GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 291

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 292 AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT 351

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 352 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 408

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 409 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 466

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 467 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 522

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 523 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 582

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 583 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVIARDESEAEK 641


>gi|291414169|ref|XP_002723335.1| PREDICTED: regulator of chromosome condensation 2 [Oryctolagus
           cuniculus]
          Length = 560

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/406 (39%), Positives = 231/406 (56%), Gaps = 34/406 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  + H +
Sbjct: 142 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 201

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +TE G+ 
Sbjct: 202 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 261

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
            AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ ++  +G ++ + G 
Sbjct: 262 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSM-ITDCKG-NLYSFGC 318

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
           P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            +  VACG
Sbjct: 319 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 376

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
            NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I AG  
Sbjct: 377 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYT 432

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
            S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG
Sbjct: 433 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 492

Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI 
Sbjct: 493 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 538


>gi|351711822|gb|EHB14741.1| Protein RCC2, partial [Heterocephalus glaber]
          Length = 427

 Score =  273 bits (698), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 160/410 (39%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 4   GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSC 63

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T
Sbjct: 64  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVLATCGRNHTLALT 123

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 124 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 181 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 238

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 239 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 294

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 295 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 354

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 355 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 404


>gi|33239431|ref|NP_776292.1| protein RCC2 [Mus musculus]
 gi|71152034|sp|Q8BK67.1|RCC2_MOUSE RecName: Full=Protein RCC2
 gi|26344982|dbj|BAC36140.1| unnamed protein product [Mus musculus]
 gi|55991474|gb|AAH86666.1| Regulator of chromosome condensation 2 [Mus musculus]
          Length = 520

 Score =  273 bits (697), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/414 (38%), Positives = 231/414 (55%), Gaps = 34/414 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  + H +
Sbjct: 102 GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSCAAHSL 161

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T+ G+ 
Sbjct: 162 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEALSHEAIVLAACGRNHTLALTDTGSV 221

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
            AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++ + G 
Sbjct: 222 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDCK--GNLYSFGC 278

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
           P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            +  VACG
Sbjct: 279 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACG 336

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
            NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I AG  
Sbjct: 337 ANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYT 392

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
            S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG
Sbjct: 393 CSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWG 452

Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 453 PSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 506


>gi|344283459|ref|XP_003413489.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Loxodonta
           africana]
          Length = 523

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 162/425 (38%), Positives = 234/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 86  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 145

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
             GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 146 XSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 205

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 206 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 264

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 265 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 320

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 321 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 380

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 381 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSL 436

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 437 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSH 496

Query: 396 SLVIV 400
           SLVI 
Sbjct: 497 SLVIA 501


>gi|350585688|ref|XP_003482025.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 [Sus scrofa]
          Length = 458

 Score =  272 bits (696), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 159/410 (38%), Positives = 230/410 (56%), Gaps = 34/410 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           G +  G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  
Sbjct: 35  GSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLSGVRVRTVVSGSC 94

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+++ 
Sbjct: 95  AAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEXPRLLEGLSHEVIVSAACGRNHTLLLP 154

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASI 184
           E G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++
Sbjct: 155 ETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNL 211

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IV 232
            + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            + 
Sbjct: 212 YSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVR 269

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
            VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I
Sbjct: 270 DVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQI 325

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
            AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S
Sbjct: 326 YAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADES 385

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 386 TISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYSHSLVI 435


>gi|58376301|ref|XP_308044.2| AGAP002151-PA [Anopheles gambiae str. PEST]
 gi|55246357|gb|EAA03694.2| AGAP002151-PA [Anopheles gambiae str. PEST]
          Length = 474

 Score =  271 bits (694), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 163/419 (38%), Positives = 232/419 (55%), Gaps = 38/419 (9%)

Query: 7   EKMVEEETG-KEKG-GELLFCGSTCWDAVGRR--KGALDGNLVSPTRLRP-------LVG 55
           EK+ EE     +KG G+LL  G   W+  G+R  KG         T++RP         G
Sbjct: 52  EKLPEELLAVYDKGPGKLLIAGMVSWEMTGKRDSKGV--------TKIRPNLFTFHRFTG 103

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
              R +A+ C + H V +D   + +T+GRN+  QLGHGD +  ++PT V++L+ + + +A
Sbjct: 104 ETYRSMASFCSAAHSVLIDENWKAFTFGRNQLSQLGHGDTVTCEKPTQVADLADFNVIQA 163

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFT 173
             GR+HT+ +T+ G   A G NK GQ G G+    I  SP R   +   +    CGA+F+
Sbjct: 164 ACGRNHTLFLTDTGTVYACGDNKSGQCGVGNKLPTIT-SPTRISYNGPPIIKVGCGAEFS 222

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------I 223
           V L  ++G ++   GLP+YGQLGH TD  Y    + +   +E QPR             +
Sbjct: 223 VIL-DIKG-NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFETQPRKVLVYMEKNKEGHV 280

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             +    I+  ACG NHTVA+DSK   Y+WGFGG GRLGH EQKDE VPR +  F   N 
Sbjct: 281 LPIENVNIIDFACGNNHTVAIDSKNRAYSWGFGGIGRLGHAEQKDEMVPRLIKFFDTQNR 340

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
                 +  GS  S   +  G LY++G+ K  G+  MYPKP+ DL+GWN+  + +G    
Sbjct: 341 --KVMRVFCGSSYSLAISDIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITSIGTGYTSI 398

Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            + AD S I+WG +  YGELG G   QKSS+ PK+V  +EGM +  VA GY HS+++V+
Sbjct: 399 VISADDSLIAWGASPTYGELGLGDL-QKSSSTPKEVTRMEGMKIPMVALGYSHSMLLVN 456


>gi|355715935|gb|AES05448.1| regulator of chromosome condensation 2 [Mustela putorius furo]
          Length = 426

 Score =  270 bits (690), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 160/420 (38%), Positives = 232/420 (55%), Gaps = 34/420 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 16  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 75

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I
Sbjct: 76  LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEGLSHEVI 135

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+ LAFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 136 VSAACGRNHTLALTETGSVLAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 194

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 195 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 250

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 251 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 310

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +
Sbjct: 311 D----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSL 366

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG +  KSS   ++V  L+G+    VA GY H
Sbjct: 367 ACGKSSIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFTEQVAMGYAH 426


>gi|148226064|ref|NP_001089405.1| protein RCC2 homolog [Xenopus laevis]
 gi|71152035|sp|Q52KW8.1|RCC2_XENLA RecName: Full=Protein RCC2 homolog
 gi|62739346|gb|AAH94159.1| MGC115292 protein [Xenopus laevis]
          Length = 513

 Score =  269 bits (688), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 160/425 (37%), Positives = 235/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 76  VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R VA+G  + H + + VEG+ ++WGRN++GQLGHGD  + D P ++  L     
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE+G+  AFG NK GQLG G+ + +  PSP + L +   +T  ACGA
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D +Y  +  + ++ Y+ +   R IA    +T
Sbjct: 255 EFSMIMDC--KGNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  +ACG NH++ +DS+  V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370

Query: 279 QRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P    A I AG+  S   +  G L+ WG    + D  MYPK + DL GW +R +
Sbjct: 371 D----FPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSL 426

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG    KSS   ++V  L+G++   V  G  H
Sbjct: 427 ACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQVIMGNSH 486

Query: 396 SLVIV 400
           +LV+ 
Sbjct: 487 TLVVA 491


>gi|390336513|ref|XP_791849.3| PREDICTED: protein RCC2 homolog [Strongylocentrotus purpuratus]
          Length = 477

 Score =  269 bits (687), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 165/422 (39%), Positives = 218/422 (51%), Gaps = 33/422 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDG---------NLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           G LLF G T WD +GR K              NL  P RL  L G+ +R V +G  SCH 
Sbjct: 53  GTLLFSGGTNWDLIGRHKLTKAAASRPIIGGRNLWGPHRLSALEGIRVRNVFSGPSSCHS 112

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           V +  EG+  T+GRN+R QLGHGD  +RD PT+V  L  + I  A  GR+HT+ +T+DG 
Sbjct: 113 VIITEEGKAMTFGRNDREQLGHGDDYRRDVPTLVEGLEDHHIVTAACGRNHTMCLTDDGT 172

Query: 131 SLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTV-----WLSSVEGASI 184
             AFG N+ GQ G G   + +  P       S +   ACGADF++               
Sbjct: 173 VFAFGDNRMGQCGIGVQSSSVGTPCKPNYYGSPIVKVACGADFSMIXXXXXXXXXXXXXX 232

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-----------LAGETIVK 233
              G P Y    H T+ +Y+   S  KL+ E    P+ +             L G  I  
Sbjct: 233 XXXGSPDYTDHCHNTNGQYSVTAS--KLSSECVSTPKKVTCFLEKGREGKKYLEGTVIKD 290

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +ACG NH+VA+D +  V+TWGFGGYGRLGH++  DE VPR V  F+    L     I+AG
Sbjct: 291 IACGNNHSVAMDMQKRVFTWGFGGYGRLGHQKPDDEPVPRSVKFFEM--PLKGAKTINAG 348

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
           S         GQ++ WG+ K  G+  MYPKP+ DLSGWN+R +   N    V AD + IS
Sbjct: 349 SSYCMVVTEQGQVFFWGQAKTTGEATMYPKPVQDLSGWNVRSIGCSNHSIVVAADDAIIS 408

Query: 354 WGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLD 410
           WG +  YGEL YG    KSS + KK   L+ ++V  + CG GHSL I   D     E L+
Sbjct: 409 WGPSPTYGELAYGEADSKSSTVAKKARPLDNIYVHHLTCGAGHSLFIARDDTEKDKEELE 468

Query: 411 QV 412
           ++
Sbjct: 469 KL 470


>gi|221063272|gb|ACL98472.1| telophase disc 60 kDa protein [Xenopus laevis]
          Length = 497

 Score =  268 bits (684), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 159/425 (37%), Positives = 234/425 (55%), Gaps = 34/425 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 76  VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R VA+G  + H + + VEG+ ++WGRN++GQLGHGD  + D P ++  L     
Sbjct: 136 LTGVQVRSVASGSCAAHSLLITVEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKGEVF 195

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE+G+  AFG NK GQLG G+ + +  PSP + L +   +T  ACGA
Sbjct: 196 VHAACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D +Y  +  + ++ Y+ +   R IA    +T
Sbjct: 255 EFSMIMDCK--GNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  +ACG NH++ +DS+  V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370

Query: 279 QRNNVLPPE--AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P    A I AG+  S   +  G L+ WG    + D  MYPK + DL GW +R +
Sbjct: 371 D----FPGRGAAQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKAVQDLCGWKVRSL 426

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G     V AD S ISWG +  +GELGYG    KSS   ++V  L+G++      G  H
Sbjct: 427 ACGKSSIIVAADESTISWGPSPTFGELGYGDNKAKSSTTAQEVKTLDGIYSDQAIMGNSH 486

Query: 396 SLVIV 400
           +LV+ 
Sbjct: 487 TLVVA 491


>gi|405974201|gb|EKC38864.1| Protein RCC2 [Crassostrea gigas]
          Length = 502

 Score =  266 bits (680), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 170/429 (39%), Positives = 225/429 (52%), Gaps = 54/429 (12%)

Query: 20  GELLFCGSTCWDAVGRR----------------------------------KGALDGNLV 45
           GELL  G T WD VGR+                                  K A   NL 
Sbjct: 61  GELLISGGTNWDLVGRKSLPKGGININDCPGQVKSLFGQVKLWVDLSDRATKNAGGPNLW 120

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            P R+  LVGV IR   +GC +CH V +  +G+  T+GRN+ GQLG GD  +RD PT V 
Sbjct: 121 RPHRMSSLVGVKIRSAISGCTACHSVIITADGKAMTFGRNDCGQLGQGDLNRRDLPTEVP 180

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVT 164
            L    I  A  G++HT+ +T+ G+  A G NK GQLG G   + I  P+ +      V 
Sbjct: 181 LLQGLNIVDACCGKNHTLFLTDKGHVYACGDNKMGQLGLGHQSSTILVPTKISYKGPPVR 240

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA-- 222
             A G +F++ ++ + G ++ + G P+YGQLGH TD +Y    +S K+++  + RPR   
Sbjct: 241 KVAGGGEFSM-MADIRG-NLYSFGCPEYGQLGHNTDGKYFV--TSNKMSFRCETRPRKVN 296

Query: 223 ----------IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                     I  +    + ++ACG NHT  +DSK  V+TWGFGGYGRLGH E KDE VP
Sbjct: 297 VFIEKARDGHIVPVTDVEVRELACGANHTAIIDSKKRVFTWGFGGYGRLGHAEPKDEMVP 356

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN 332
           R +  F   N    +  I AGS  +  T   G LYMWG  K  G+  MYPK + DLSGW 
Sbjct: 357 RHLKFFDGPNRGATQ--IHAGSTFTLATNEYGALYMWGINKAVGEAAMYPKLVQDLSGWR 414

Query: 333 LRCMDSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
           +R +   N    V AD S ISWG +  YGEL YG    KSS  P++V  L G ++ SV C
Sbjct: 415 IRSVGCCNKSIVVAADESLISWGPSPTYGELCYGEDKAKSSTTPQEVKTLYGGYIQSVGC 474

Query: 392 GYGHSLVIV 400
           GYGH+L+I 
Sbjct: 475 GYGHTLLIF 483



 Score = 45.1 bits (105), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 11/111 (9%)

Query: 304 GQLYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSG-NMHH--FVGADSSCISW 354
           GQ+ +W  L +       G +   P  +  L G  +R   SG    H   + AD   +++
Sbjct: 98  GQVKLWVDLSDRATKNAGGPNLWRPHRMSSLVGVKIRSAISGCTACHSVIITADGKAMTF 157

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G    G+LG G   ++   +P +V +L+G++++   CG  H+L + D+ +V
Sbjct: 158 GRNDCGQLGQGDLNRRD--LPTEVPLLQGLNIVDACCGKNHTLFLTDKGHV 206


>gi|348533602|ref|XP_003454294.1| PREDICTED: protein RCC2 homolog [Oreochromis niloticus]
          Length = 494

 Score =  261 bits (667), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 153/417 (36%), Positives = 225/417 (53%), Gaps = 30/417 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H +
Sbjct: 76  GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL 135

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRN++GQLGHGD  + + P ++  L+++ I     GR+HT+ +TEDG  
Sbjct: 136 FITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEALAEHVIVSVACGRNHTLALTEDGAV 195

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG G+  + +  P+ +      +   ACGA+F++ +      ++ + G P
Sbjct: 196 YSFGENKLGQLGQGNQTDAVLTPALISYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 253

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH +D ++  +   ++   E  PR  A          I  +    +  VACG NH
Sbjct: 254 EYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGANH 313

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
           T+ +DS+  V+TWGFGGYGRLGH EQKDE VPR V +F      P      I AG   S 
Sbjct: 314 TLVLDSQKRVFTWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYAGYQCSF 369

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
             +  G L+ WG    + +  MYPK + DL GW +R +  G     + AD S ISWG + 
Sbjct: 370 AVSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIIAADESTISWGPSP 429

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
            +GELGYG    KSS   ++V  L+G+++  V  GY HSLVI   D     E+L ++
Sbjct: 430 TFGELGYGDTKPKSSTTAQEVKTLDGIYIEQVVMGYSHSLVIARQDTQQEQEKLKKL 486


>gi|357609796|gb|EHJ66680.1| hypothetical protein KGM_08790 [Danaus plexippus]
          Length = 479

 Score =  260 bits (664), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 154/406 (37%), Positives = 216/406 (53%), Gaps = 34/406 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTR-----LRPLVGVDIRFVAAGCVSCHCVAVD 74
           G LL  G   WD V +R    D N    T               R + +GC + H + + 
Sbjct: 72  GVLLISGLVSWDLVAKR----DNNPSKKTHPNLYTFHKFTEQKYRLIVSGCSAGHSILIS 127

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            EG  Y++GRN  GQLG GD   R+ P  +  L  + I  A  GR+H++ VT+ G   A 
Sbjct: 128 AEGEAYSFGRNSCGQLGFGDTTTRNIPEPIPTLKGFNIIHAAVGRNHSLFVTDTGTVYAC 187

Query: 135 GWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G NK  Q G G    +I  P+ VR   + +    CGA+F++ L      ++ + GLP+YG
Sbjct: 188 GDNKSAQCGLGHTTPQILVPTRVRYTGAPIVKVGCGAEFSMILDC--NGALHSFGLPEYG 245

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHT 241
           QLGH TD +Y    +S KL+Y  +  P+ IA    ++            IV  +CG NHT
Sbjct: 246 QLGHNTDGKYFV--TSTKLSYHFEMVPKHIAFFFEKSKDGHVSPVKDVDIVDFSCGNNHT 303

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRNNVLPPEAVISAGSVNSSC 299
           VA+DSK   Y+WGFGG+GRLGH EQ+DE VPR +  F  Q   V      +  G+  S  
Sbjct: 304 VAIDSKKRAYSWGFGGFGRLGHAEQRDESVPRLIKYFDSQARGV----RSVHCGATYSLA 359

Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG-HAQ 358
               G L+M+G+ K  G+  MYPKP+ DL+GWN+R + + N    + AD S I+WG    
Sbjct: 360 VNEHGALFMFGQTKRTGEANMYPKPVQDLTGWNIRSVGTSNTSIVIAADDSLIAWGVSPT 419

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           YGELG G    KS+A PK+V  +EG+++  VA GY H+L++ D T+
Sbjct: 420 YGELGTGDI-NKSTARPKEVTRMEGLNITQVAMGYSHTLLLSDDTS 464


>gi|156555775|ref|XP_001602946.1| PREDICTED: protein RCC2 homolog [Nasonia vitripennis]
          Length = 486

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/410 (38%), Positives = 218/410 (53%), Gaps = 33/410 (8%)

Query: 13  ETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCV 66
           E G  K G LL CG T WD  GR+      K  +  +L +P   + L G  +R VA+G  
Sbjct: 67  EGGWGKAGTLLMCGLTNWDIAGRKAPPKGAKANIGRSLWTPHTFKNLNGARVRLVASGPA 126

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H V V  + RC  +GRN++GQLG GD  +RD PT V  L  + +  A  GR+HT+ +T
Sbjct: 127 ASHSVIVTEDNRCLVFGRNDKGQLGLGDTKRRDDPTEVEALKGHTVIGAACGRNHTLFLT 186

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNE-IEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
             G     G N  GQ G G      I  + V+     +    CGADF++ L  V+G  + 
Sbjct: 187 SRGIVYGAGANNLGQCGVGKTDAMIITATKVKYSGPPIVKVGCGADFSMIL-DVKGG-LH 244

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA------------IAALAGETIVK 233
           + G P+YG LGH TD +Y    +S KLA+  +  P+             I  L G  I  
Sbjct: 245 SFGTPEYGVLGHNTDGKYFV--TSTKLAFHFEKAPKRIVIYVERTKDGHITPLDGVEITD 302

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVI 290
            +CG  H VA+DSK   ++WGFGG+GRLGH EQ+DE VPR +   +     PP      +
Sbjct: 303 FSCGYQHVVAIDSKNRSFSWGFGGFGRLGHNEQRDELVPRLIKYLE-----PPNRGAKAV 357

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
             GS  S      G + ++G+ K  G+  MYPKP+ DLSGW++RC+        VGAD S
Sbjct: 358 FCGSTFSLVLNVHGTMLLFGQAKRTGEANMYPKPIQDLSGWDIRCVACSQTSVVVGADES 417

Query: 351 CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            I+WG    +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L+I
Sbjct: 418 VIAWGCSPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 310 GKLKNNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGP 366
           G   N G     P    +L+G  +R + SG   +    V  D+ C+ +G    G+LG G 
Sbjct: 95  GAKANIGRSLWTPHTFKNLNGARVRLVASGPAASHSVIVTEDNRCLVFGRNDKGQLGLGD 154

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
             ++    P +V+ L+G  VI  ACG  H+L +  R
Sbjct: 155 TKRRDD--PTEVEALKGHTVIGAACGRNHTLFLTSR 188


>gi|297282340|ref|XP_002808321.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2-like [Macaca mulatta]
          Length = 491

 Score =  259 bits (661), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/409 (37%), Positives = 224/409 (54%), Gaps = 37/409 (9%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L GV +R V +G  + H +
Sbjct: 70  GQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLAGVRVRTVVSGSCAAHSL 129

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +TE G+ 
Sbjct: 130 LITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSV 189

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGL 189
            AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++ + G 
Sbjct: 190 FAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGC 246

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
           P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T            +  VAC 
Sbjct: 247 PEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACX 304

Query: 238 TNHT---VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISA 292
                  + +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I A
Sbjct: 305 XXXXXXPLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYA 360

Query: 293 GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
           G   S   +  G L+ WG    + +  MYPK + DL GW +R +  G     V AD S I
Sbjct: 361 GYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTI 420

Query: 353 SWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           SWG +  +GELGYG +  KSS   ++V  L+G+    VA GY HSLVI 
Sbjct: 421 SWGPSPTFGELGYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIA 469


>gi|242008071|ref|XP_002424836.1| conserved hypothetical protein [Pediculus humanus corporis]
 gi|212508386|gb|EEB12098.1| conserved hypothetical protein [Pediculus humanus corporis]
          Length = 487

 Score =  258 bits (660), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 167/428 (39%), Positives = 230/428 (53%), Gaps = 43/428 (10%)

Query: 6   AEKMVEEETGKEKGGELLFCGSTCWDAVGRR---KGALDG-----NLVSPTRLRPLVGVD 57
           +EK+ E+ +G    G LL CG   WD  GR+   K   +      NL  P R+ P   V 
Sbjct: 64  SEKLKEKLSGNV--GVLLICGGVNWDLAGRKVPPKSVKNACLTPINLYIPHRMVPEFRV- 120

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
            R VA GC S H V +  EG+  T+G     QLG GD   RD PT+V  L +Y I  A  
Sbjct: 121 -RLVATGCNSAHSVIITEEGKAMTFG-----QLGVGDTKTRDLPTLVESLKEYIIVGAAT 174

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGS--IRNEIEPSPVRCLVSEVTATACGADFTVW 175
           GRSHT+ +TE G   + G NK+GQLG GS  I+    P  ++     +    CGA+F++ 
Sbjct: 175 GRSHTLFLTERGTVFSVGDNKNGQLGIGSSTIQTLETPRMIKYKGPPIVKVDCGAEFSMI 234

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG------- 228
           L  V G S+ + GLP+YGQLGH TD +Y    +S KL++     P+ I            
Sbjct: 235 LD-VRG-SLHSFGLPEYGQLGHNTDGQYFV--NSNKLSFHCVLAPKKIGMFIEKGKDNHP 290

Query: 229 -----ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRN 281
                + I+  +CG NHTVA+D +  +++WGFGGYGRLGH E KDE+VPR +  F  Q  
Sbjct: 291 VPVKVDEILDFSCGQNHTVAIDGRKRLFSWGFGGYGRLGHAEPKDEFVPRLIKFFDSQSR 350

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
            V      +  GS  +      G +Y++G+ K  G+  MYPKPL DLSGWN+R +     
Sbjct: 351 GV----KSVYCGSSYTLAINDYGAVYLFGQTKRTGEANMYPKPLQDLSGWNVRSVGCSVT 406

Query: 342 HHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              V AD S I+WG +  +GELG G   ++SS +P +V  L+G+H+  VACG  H+L I 
Sbjct: 407 SIVVAADESVIAWGPSPTHGELGIGEL-RRSSTVPVEVKTLDGIHINQVACGIAHTLFIA 465

Query: 401 DRTNVGER 408
             +   E+
Sbjct: 466 RDSTEAEK 473


>gi|195434691|ref|XP_002065336.1| GK14718 [Drosophila willistoni]
 gi|194161421|gb|EDW76322.1| GK14718 [Drosophila willistoni]
          Length = 486

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 151/425 (35%), Positives = 229/425 (53%), Gaps = 34/425 (8%)

Query: 3   ELEAEKMVEEE---TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP------- 52
           EL+    + E+   T ++  G+LL  G   WD  G+R      +  + T++RP       
Sbjct: 56  ELDPPSKLPEDLLATMEKTPGQLLVAGMVTWDLTGKR------DRKNVTKVRPNLYSFHR 109

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYK 111
                 R+VA+G  + H + ++++ +   +GRN  GQLG    I+  ++PT++  L +  
Sbjct: 110 FTDEKYRYVASGPAAAHSIIINMDRKALGFGRNPSGQLGLSQDIKLVEKPTLIPALEQLN 169

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGA 170
           + +A  GR HT+ +T+ G   A G NK GQ G G+    I  P+P+      +    CGA
Sbjct: 170 VVQAACGRHHTLFLTDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRVGCGA 229

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA-------- 222
           +F+V L  ++G ++   GLP+YGQLGH TD +Y    + +   +E  P+           
Sbjct: 230 EFSVILD-IKG-NLHTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKE 287

Query: 223 --IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
             +  + G  IV  ACG NHTVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F  
Sbjct: 288 GHVTPVDGVQIVDFACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDA 347

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
                    +  GS  S      G LY++G+ K  G+  MYPKP+ DLSGWN+  +   N
Sbjct: 348 QGR--GARSVFCGSTFSLIVNELGLLYLFGQNKKTGEANMYPKPVQDLSGWNITAIGCAN 405

Query: 341 MHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               + AD + I+WG +  +GELG G + QKSS +PK+V  ++G+ +  VA GY H+ ++
Sbjct: 406 TSIMISADDTLIAWGASPTFGELGIGEF-QKSSTVPKEVPKMDGIKIPQVAMGYSHTALL 464

Query: 400 VDRTN 404
           VD T+
Sbjct: 465 VDTTH 469


>gi|432959904|ref|XP_004086396.1| PREDICTED: LOW QUALITY PROTEIN: protein RCC2 homolog [Oryzias
           latipes]
          Length = 496

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 152/420 (36%), Positives = 226/420 (53%), Gaps = 33/420 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P     L  V +  V +G  + H +
Sbjct: 75  GQLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHHYGCLNDVQVSCVVSGPCAAHSL 134

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  +G+ ++WGRN++GQLGHGD  + + P ++  L++  I  A  GR+HT+V+TEDG +
Sbjct: 135 LMTTDGKLWSWGRNDKGQLGHGDTKRIEAPKLIEALAEQVIVSAACGRNHTLVLTEDGTA 194

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG G+  + +  P+P+      +   +CGA+F++ +      ++ + G P
Sbjct: 195 YSFGENKLGQLGQGNQTDAVLSPAPISYNGQPLVKVSCGAEFSMVVDC--KGNLYSFGCP 252

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH +D ++  +   ++   E  PR  A          I  +    +  VACG NH
Sbjct: 253 EYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKSKDGQIMPVPNVVVRDVACGGNH 312

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVISAG---SV 295
           T+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P    A I AG   S 
Sbjct: 313 TLVLDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGAAQIYAGYQCSF 368

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
                   G L+ WG    + +  MYPK + DL GW +R +  G     + AD S ISWG
Sbjct: 369 AVXXXXXXGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIIAADESTISWG 428

Query: 356 HA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
            +  +GELGYG    KSS   ++V  L+G+++  V  GY H+L I   D     ERL ++
Sbjct: 429 PSPTFGELGYGDNKPKSSTTAQEVKTLDGIYIEQVVMGYSHTLAIARQDTPQEEERLKKL 488


>gi|350418381|ref|XP_003491841.1| PREDICTED: protein RCC2 homolog [Bombus impatiens]
          Length = 486

 Score =  256 bits (654), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/403 (38%), Positives = 217/403 (53%), Gaps = 29/403 (7%)

Query: 18  KGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           K G LL CG T WD  GR+      K  +  +L +P   + L G  +R VA+G  + H +
Sbjct: 72  KPGTLLMCGLTNWDMAGRKAPPKGVKVNVGRSLWTPHTFKNLNGARVRLVASGPAASHSI 131

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            V  + RC  +GRN++GQLG GD  +RD PT V+ L  + +  A  GR+HT+ +T  G  
Sbjct: 132 IVTEDNRCLAFGRNDKGQLGVGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLTSRGIV 191

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G S    +  + V+     +    CGADF++ L    G  + + G P
Sbjct: 192 FAAGDNKLGQCGVGKSDACIVSATKVKYSGPPIVKVGCGADFSMILDIKGG--LHSFGSP 249

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVACGTNH 240
           +YG LGH TD +Y   ++ +   +E  P+       RA    +  L    I   +CG +H
Sbjct: 250 EYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFSCGHHH 309

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNS 297
           TVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +     PP   + A   GS  S
Sbjct: 310 TVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPTRGVRAIYCGSTYS 364

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G   M+G+ K  G+  MYPKP+ DLSGW +RC+        V AD S I+WG +
Sbjct: 365 IAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVIAWGAS 424

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L+I
Sbjct: 425 PTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           N G     P    +L+G  +R + SG   +    V  D+ C+++G    G+LG G   ++
Sbjct: 99  NVGRSLWTPHTFKNLNGARVRLVASGPAASHSIIVTEDNRCLAFGRNDKGQLGVGDTKRR 158

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               P +V  L+G  VI  +CG  H+L +  R
Sbjct: 159 DE--PTEVTALKGHTVIGASCGRNHTLFLTSR 188


>gi|66562328|ref|XP_392946.2| PREDICTED: protein RCC2 homolog [Apis mellifera]
          Length = 486

 Score =  255 bits (652), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/403 (38%), Positives = 216/403 (53%), Gaps = 29/403 (7%)

Query: 18  KGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           K G LL CG T WD  GR+      K  +  +L +P   + L G  +R VA+G  + H +
Sbjct: 72  KPGTLLMCGLTNWDMAGRKAPPKGVKANIGRSLWTPHTFKNLNGSRVRLVASGPAASHSI 131

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            V  + RC  +GRN++GQLG GD  +RD PT V+ L  + +  A  GR+HT+ +T  G  
Sbjct: 132 IVTEDNRCLAFGRNDKGQLGIGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLTSRGIV 191

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G S    I  + V+     +    CGA+F++ L    G  + + G P
Sbjct: 192 FAAGDNKLGQCGIGKSDACIISATKVKYSGPPIVKVGCGAEFSMILDIKGG--LHSFGSP 249

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVACGTNH 240
           +YG LGH TD +Y   ++ +   +E  P+       RA    +  L    I   +CG  H
Sbjct: 250 EYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFSCGHYH 309

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNS 297
           TVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +     PP   + A   GS  S
Sbjct: 310 TVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPSRGVRAVYCGSTYS 364

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G   M+G+ K  G+  MYPKP+ DLSGW +RC+        V AD S I+WG +
Sbjct: 365 IAINIHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVIAWGAS 424

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L+I
Sbjct: 425 PTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           N G     P    +L+G  +R + SG   +    V  D+ C+++G    G+LG G   ++
Sbjct: 99  NIGRSLWTPHTFKNLNGSRVRLVASGPAASHSIIVTEDNRCLAFGRNDKGQLGIGDTKRR 158

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               P +V  L+G  VI  +CG  H+L +  R
Sbjct: 159 DE--PTEVTALKGHTVIGASCGRNHTLFLTSR 188


>gi|47085959|ref|NP_998341.1| protein RCC2 homolog [Danio rerio]
 gi|71152032|sp|Q6NYE2.1|RCC2_DANRE RecName: Full=Protein RCC2 homolog
 gi|42744570|gb|AAH66628.1| Zgc:77115 [Danio rerio]
          Length = 495

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 228/426 (53%), Gaps = 29/426 (6%)

Query: 5   EAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGV 56
           + ++ ++ E  K KG +LL  G+T WD +GR++          L  NL  P R   L  V
Sbjct: 63  DVKEKIKLEVPKVKG-QLLIFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLSDV 121

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            +  V +G  + H + +  EG+ ++WGRN++GQLGHGD  + + P ++  L +  I  A 
Sbjct: 122 QVSCVVSGPCAAHSLIITTEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAA 181

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVW 175
            GR+HT+ +TE+G    FG NK GQLG G+  + +  P+ ++     +   ACGA+F++ 
Sbjct: 182 CGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPIVKVACGAEFSMI 241

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALA 227
           +      ++ + G P+YGQLGH +D ++  +   ++   E  PR  AI          L 
Sbjct: 242 VDC--KGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLP 299

Query: 228 GETIV--KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
              +V   VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P
Sbjct: 300 VPNVVARDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FP 355

Query: 286 PEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
                 I  G   S   +  G L+ WG    + +  MYPK + DL GW +R +  G    
Sbjct: 356 GRGATQIYCGYQCSFALSEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKIRSLACGKSSI 415

Query: 344 FVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
            V AD S ISWG +  +GELGYG    KSS   ++V  L+G++   V  GY HSLVI  +
Sbjct: 416 IVAADDSTISWGPSPTFGELGYGDNKPKSSTTAQEVKTLDGVYSEQVVMGYSHSLVIARQ 475

Query: 403 TNVGER 408
               E+
Sbjct: 476 DTEQEK 481


>gi|195030320|ref|XP_001988016.1| GH10796 [Drosophila grimshawi]
 gi|193904016|gb|EDW02883.1| GH10796 [Drosophila grimshawi]
          Length = 491

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 149/405 (36%), Positives = 222/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF-------VAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP +    RF       VA+G  S H + 
Sbjct: 81  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLFSFHRFTDEKYRSVASGPASAHTIL 134

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++P+++  L +  I +A AGR HT+ +T+ G  
Sbjct: 135 INMDRKALGFGRNPSGQLGLSSDIKLVEKPSLIPALEQLNIVQAAAGRHHTLFLTDTGTV 194

Query: 132 LAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+   N   P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 195 YACGENKSGQCGVGNAHPNVFAPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 252

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 253 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 312

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           I  GS  S   
Sbjct: 313 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGR--GGRSIYCGSTFSLII 370

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G LY++G+ K  G+  MYPKP+ DL+GWN+  +   N    + AD + I+WG +  +
Sbjct: 371 NELGLLYLFGQNKKTGEANMYPKPVQDLAGWNITAIGCANTSIMISADDTLIAWGASPTF 430

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V+ GY H+ ++VD T+
Sbjct: 431 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVSMGYSHTALLVDTTH 474


>gi|198421783|ref|XP_002126864.1| PREDICTED: similar to MGC115292 protein [Ciona intestinalis]
          Length = 475

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/424 (37%), Positives = 224/424 (52%), Gaps = 33/424 (7%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDG---------NLVSPTRLRPLVGVDIRFVAAGCVS 67
           E  GE+L CG T W +V  RK A  G         NL  P R + LVG+ +  V  GC S
Sbjct: 52  ENSGEVLICGGTNW-SVNSRKKARKGDEKYENVGKNLFKPHRYKSLVGIKVSRVITGCCS 110

Query: 68  CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
            H + +  EG  Y+WGRNE GQLGHG++++ D P  +  L  YK+     G++HT+ +TE
Sbjct: 111 NHNLIITNEGNVYSWGRNECGQLGHGNRVRYDSPKPIDSLQSYKVVNGATGKNHTLCLTE 170

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASIL 185
           +G+  AFG N  GQLG G++   + PSP       + +   +CG +F+V L   EG  + 
Sbjct: 171 NGDVFAFGDNAQGQLGLGNLSTNV-PSPTHIAYKGNPIVDVSCGGEFSVIL-DCEGY-VY 227

Query: 186 NAGLPQYGQLGHGTDNEY----------NTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           + G P+YGQLG+ TD +Y          N K++     +  + +   +  L    I  ++
Sbjct: 228 SFGCPEYGQLGNNTDGKYFASGNKMAFDNVKNAFRIPLWVEKLKGGQVLPLNDVKITSIS 287

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG NH VA+DSK  V+TWGFGGYGRLGH EQKDE  PR + VF+R      +  + AG  
Sbjct: 288 CGNNHVVALDSKKRVFTWGFGGYGRLGHSEQKDEHTPRLLTVFERAGRGAVQ--VYAGYS 345

Query: 296 NSSCTAGGGQLYMWGKLK--NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
            S      G    WG     ++ +  MYPKPL DL GW +R +  G  H  V AD S I 
Sbjct: 346 FSIALNEMGSTMFWGLQGSISSRETTMYPKPLPDLQGWEIRSIGCGYRHTVVAADESVIV 405

Query: 354 WGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER--LD 410
           WG     GELG G   +KSSA P  +     + +  V+CG  H+L+I    +  ++  LD
Sbjct: 406 WGTGTSNGELGLGE-SRKSSANPDLMKSASNLFIQRVSCGQTHTLMIARNKDEKDQAALD 464

Query: 411 QVIL 414
           ++ L
Sbjct: 465 EIPL 468


>gi|340726568|ref|XP_003401628.1| PREDICTED: protein RCC2 homolog [Bombus terrestris]
          Length = 486

 Score =  255 bits (651), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/403 (38%), Positives = 216/403 (53%), Gaps = 29/403 (7%)

Query: 18  KGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           K G LL CG T WD  GR+      K  +  +L +P   + L G  +R VA+G  + H +
Sbjct: 72  KPGTLLMCGLTNWDMAGRKAPPKGVKVNVGRSLWTPHTFKNLNGARVRLVASGPAASHSI 131

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            V  + RC  +GRN++GQLG GD  +RD PT V+ L  + +  A  GR+HT+ +T  G  
Sbjct: 132 IVTEDNRCLAFGRNDKGQLGVGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLTSRGIV 191

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G S    +  + V+     +    CGADF++ L    G  + + G P
Sbjct: 192 FAAGDNKLGQCGVGKSDACIVSATKVKYSGPPIVKVGCGADFSMILDIKGG--LHSFGSP 249

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVACGTNH 240
           +YG LGH TD +Y   ++ +   +E  P+       RA    +  L    I   +CG  H
Sbjct: 250 EYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFSCGHYH 309

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNS 297
           TVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +     PP   + A   GS  S
Sbjct: 310 TVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPTRGVRAIYCGSTYS 364

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G   M+G+ K  G+  MYPKP+ DLSGW +RC+        V AD S I+WG +
Sbjct: 365 IAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVIAWGAS 424

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L+I
Sbjct: 425 PTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           N G     P    +L+G  +R + SG   +    V  D+ C+++G    G+LG G   ++
Sbjct: 99  NVGRSLWTPHTFKNLNGARVRLVASGPAASHSIIVTEDNRCLAFGRNDKGQLGVGDTKRR 158

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               P +V  L+G  VI  +CG  H+L +  R
Sbjct: 159 DE--PTEVTALKGHTVIGASCGRNHTLFLTSR 188


>gi|380023928|ref|XP_003695761.1| PREDICTED: protein RCC2 homolog [Apis florea]
          Length = 486

 Score =  255 bits (651), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 154/403 (38%), Positives = 216/403 (53%), Gaps = 29/403 (7%)

Query: 18  KGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           K G LL CG T WD  GR+      K  +  +L +P   + L G  +R VA+G  + H +
Sbjct: 72  KPGTLLMCGLTNWDMAGRKAPPKGVKANVGRSLWTPHTFKNLNGSRVRLVASGPAASHSI 131

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            V  + RC  +GRN++GQLG GD  +RD PT V+ L  + +  A  GR+HT+ +T  G  
Sbjct: 132 IVTEDNRCLAFGRNDKGQLGIGDTKRRDEPTEVTALKGHTVIGASCGRNHTLFLTSRGIV 191

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G S    I  + V+     +    CGA+F++ L    G  + + G P
Sbjct: 192 FAAGDNKLGQCGVGKSDACIISATKVKYSGPPIVKVGCGAEFSMILDIKGG--LHSFGSP 249

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVACGTNH 240
           +YG LGH TD +Y   ++ +   +E  P+       RA    +  L    I   +CG  H
Sbjct: 250 EYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYIERAKDGHVTPLDRVEITDFSCGHYH 309

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNS 297
           TVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +     PP   + A   GS  S
Sbjct: 310 TVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPSRGVRAVYCGSTYS 364

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G   M+G+ K  G+  MYPKP+ DLSGW +RC+        V AD S I+WG +
Sbjct: 365 IAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVIAWGAS 424

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L+I
Sbjct: 425 PTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 5/92 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           N G     P    +L+G  +R + SG   +    V  D+ C+++G    G+LG G   ++
Sbjct: 99  NVGRSLWTPHTFKNLNGSRVRLVASGPAASHSIIVTEDNRCLAFGRNDKGQLGIGDTKRR 158

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               P +V  L+G  VI  +CG  H+L +  R
Sbjct: 159 DE--PTEVTALKGHTVIGASCGRNHTLFLTSR 188


>gi|383852547|ref|XP_003701788.1| PREDICTED: protein RCC2 homolog [Megachile rotundata]
          Length = 486

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 152/403 (37%), Positives = 217/403 (53%), Gaps = 29/403 (7%)

Query: 18  KGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           K G LL CG T WD  GR+      K  +  +L +P   + L G  +R +A+G  + H +
Sbjct: 72  KPGTLLMCGLTNWDMAGRKAPPKGVKVNVGRSLWTPHTFKNLNGARVRLIASGPAASHSI 131

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            V  + RC  +GRN++GQLG GD  +RD PT V+ L  + +  A  GR+HT+ +T  G  
Sbjct: 132 IVTEDNRCLAFGRNDKGQLGVGDMKRRDEPTEVTALKGHTVIAASCGRNHTLFLTSRGIV 191

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G S    +  + V+     +    CGA+F++ L    G  + + G P
Sbjct: 192 FAAGDNKLGQCGVGKSDACIVSATKVKYSGPPIVKVGCGAEFSMILDIKGG--LHSFGSP 249

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPR------PRA----IAALAGETIVKVACGTNH 240
           +YG LGH TD +Y   ++ +   +E  P+       RA    +  L    I   +CG +H
Sbjct: 250 EYGALGHNTDGKYFITNTKMAFHFEKVPKRIVLYVERAKDGHVTPLDRVEITDFSCGHHH 309

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNS 297
           TVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +     PP   + A   GS  S
Sbjct: 310 TVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-----PPNRGVRAVYCGSTYS 364

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G   M+G+ K  G+  MYPKP+ DLSGW +RC+        V AD S I+WG +
Sbjct: 365 IAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGCSQTSVVVAADDSVIAWGAS 424

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L+I
Sbjct: 425 PTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTLMI 466



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           N G     P    +L+G  +R + SG   +    V  D+ C+++G    G+LG G   ++
Sbjct: 99  NVGRSLWTPHTFKNLNGARVRLIASGPAASHSIIVTEDNRCLAFGRNDKGQLGVGDMKRR 158

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               P +V  L+G  VI+ +CG  H+L +  R
Sbjct: 159 DE--PTEVTALKGHTVIAASCGRNHTLFLTSR 188


>gi|125986855|ref|XP_001357190.1| GA21568 [Drosophila pseudoobscura pseudoobscura]
 gi|195146500|ref|XP_002014222.1| GL19056 [Drosophila persimilis]
 gi|54645520|gb|EAL34258.1| GA21568 [Drosophila pseudoobscura pseudoobscura]
 gi|194106175|gb|EDW28218.1| GL19056 [Drosophila persimilis]
          Length = 486

 Score =  254 bits (649), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTEEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    ++  ++PTI+  L +  I +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKALGFGRNPSGQLGFSPDVKLVEKPTIIPALEQLNIVQASVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YALGENKSGQCGVGNAHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDTQGR--GGRSVFCGSTFSLIV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G LY++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLYLFGQNKKTGEANMYPKPVQDLSGWNITDLGCANTSIMISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469


>gi|194860035|ref|XP_001969502.1| GG23921 [Drosophila erecta]
 gi|190661369|gb|EDV58561.1| GG23921 [Drosophila erecta]
          Length = 487

 Score =  253 bits (647), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 148/411 (36%), Positives = 222/411 (54%), Gaps = 31/411 (7%)

Query: 14  TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCV 66
           T ++  G++L  G   WD  G+R      +  + T++RP             R+VA+G  
Sbjct: 71  TLEKTAGQMLVAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTEEKYRYVASGPS 124

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVV 125
           + H + ++++ +   +GRN  GQLG    I+  ++PTI+  L +  I +A  GR HT+ +
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFL 184

Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
           T+ G   A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G S+
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SL 242

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
              GLP+YGQLGH TD +Y    + +   +E  P+             +  + G  IV  
Sbjct: 243 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 302

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG NHTVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           +  GS
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGR--GGRSVFCGS 360

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             S      G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+W
Sbjct: 361 TFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAW 420

Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           G +  +GELG G + QKSS +PK+V  L+ + +  V  GY H++++VD T+
Sbjct: 421 GASPTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470


>gi|20129257|ref|NP_608985.1| CG9135, isoform A [Drosophila melanogaster]
 gi|24582121|ref|NP_723150.1| CG9135, isoform B [Drosophila melanogaster]
 gi|7297063|gb|AAF52332.1| CG9135, isoform A [Drosophila melanogaster]
 gi|16185397|gb|AAL13911.1| LD39815p [Drosophila melanogaster]
 gi|22945734|gb|AAN10577.1| CG9135, isoform B [Drosophila melanogaster]
 gi|116812093|emb|CAL26239.1| CG9135 [Drosophila melanogaster]
 gi|116812095|emb|CAL26240.1| CG9135 [Drosophila melanogaster]
 gi|116812097|emb|CAL26241.1| CG9135 [Drosophila melanogaster]
 gi|116812099|emb|CAL26242.1| CG9135 [Drosophila melanogaster]
 gi|116812101|emb|CAL26243.1| CG9135 [Drosophila melanogaster]
 gi|116812103|emb|CAL26244.1| CG9135 [Drosophila melanogaster]
 gi|116812105|emb|CAL26245.1| CG9135 [Drosophila melanogaster]
 gi|116812107|emb|CAL26246.1| CG9135 [Drosophila melanogaster]
 gi|116812109|emb|CAL26247.1| CG9135 [Drosophila melanogaster]
 gi|116812111|emb|CAL26248.1| CG9135 [Drosophila melanogaster]
 gi|220946256|gb|ACL85671.1| CG9135-PA [synthetic construct]
 gi|220955942|gb|ACL90514.1| CG9135-PA [synthetic construct]
 gi|223967143|emb|CAR93302.1| CG9135-PA [Drosophila melanogaster]
 gi|223967145|emb|CAR93303.1| CG9135-PA [Drosophila melanogaster]
 gi|223967147|emb|CAR93304.1| CG9135-PA [Drosophila melanogaster]
 gi|223967149|emb|CAR93305.1| CG9135-PA [Drosophila melanogaster]
 gi|223967151|emb|CAR93306.1| CG9135-PA [Drosophila melanogaster]
 gi|223967153|emb|CAR93307.1| CG9135-PA [Drosophila melanogaster]
 gi|223967155|emb|CAR93308.1| CG9135-PA [Drosophila melanogaster]
 gi|223967157|emb|CAR93309.1| CG9135-PA [Drosophila melanogaster]
 gi|223967159|emb|CAR93310.1| CG9135-PA [Drosophila melanogaster]
 gi|223967161|emb|CAR93311.1| CG9135-PA [Drosophila melanogaster]
 gi|223967163|emb|CAR93312.1| CG9135-PA [Drosophila melanogaster]
 gi|223967165|emb|CAR93313.1| CG9135-PA [Drosophila melanogaster]
          Length = 487

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 148/411 (36%), Positives = 222/411 (54%), Gaps = 31/411 (7%)

Query: 14  TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCV 66
           T ++  G++L  G   WD  G+R      +  + T++RP             R+VA+G  
Sbjct: 71  TLEKTPGQMLIAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTEEKYRYVASGPS 124

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVV 125
           + H + ++++ +   +GRN  GQLG    I+  ++PTI+  L +  I +A  GR HT+ +
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFL 184

Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
           T+ G   A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G S+
Sbjct: 185 TDTGTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SL 242

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
              GLP+YGQLGH TD +Y    + +   +E  P+             +  + G  IV  
Sbjct: 243 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDF 302

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG NHTVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           +  GS
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGR--GGRSVFCGS 360

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             S      G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+W
Sbjct: 361 TFSLIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAW 420

Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           G +  +GELG G + QKSS +PK+V  L+ + +  V  GY H++++VD T+
Sbjct: 421 GASPTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470


>gi|195342914|ref|XP_002038043.1| GM18595 [Drosophila sechellia]
 gi|195576918|ref|XP_002078320.1| GD23381 [Drosophila simulans]
 gi|194132893|gb|EDW54461.1| GM18595 [Drosophila sechellia]
 gi|194190329|gb|EDX03905.1| GD23381 [Drosophila simulans]
          Length = 487

 Score =  253 bits (646), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 149/408 (36%), Positives = 220/408 (53%), Gaps = 25/408 (6%)

Query: 14  TGKEKGGELLFCGSTCWDAVGRRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
           T ++  G++L  G   WD  G+R       +  NL S  R         R+VA+G  + H
Sbjct: 71  TLEKTPGQMLVAGMVTWDLTGKRDRKNVAKVRPNLYSFHRF---TEEKYRYVASGPSAAH 127

Query: 70  CVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            + ++++ +   +GRN  GQLG    I+  ++PTI+  L +  I +A  GR HT+ +T+ 
Sbjct: 128 TILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDT 187

Query: 129 GNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           G   A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G S+   
Sbjct: 188 GTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SLHTF 245

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACG 237
           GLP+YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACG 305

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            NHTVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           +  GS  S
Sbjct: 306 NNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGR--GGRSVFCGSTFS 363

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +
Sbjct: 364 LIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGAS 423

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
             +GELG G + QKSS +PK+V  L+ + +  V  GY H++++VD T+
Sbjct: 424 PTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470


>gi|195473703|ref|XP_002089132.1| GE25855 [Drosophila yakuba]
 gi|194175233|gb|EDW88844.1| GE25855 [Drosophila yakuba]
          Length = 487

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/408 (36%), Positives = 220/408 (53%), Gaps = 25/408 (6%)

Query: 14  TGKEKGGELLFCGSTCWDAVGRRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
           T ++  G++L  G   WD  G+R       +  NL S  R         R+VA+G  + H
Sbjct: 71  TLEKTPGQMLVAGMVTWDLTGKRDRKNVAKVRPNLYSFHRF---TEEKYRYVASGPSAAH 127

Query: 70  CVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            + ++++ +   +GRN  GQLG    I+  ++PTI+  L +  I +A  GR HT+ +T+ 
Sbjct: 128 TILINMDRKALGFGRNPSGQLGLSQDIKLAEKPTIIPALEQLNIVQAAVGRHHTLFLTDT 187

Query: 129 GNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           G   A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G S+   
Sbjct: 188 GTVYACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-SLHTF 245

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACG 237
           GLP+YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG
Sbjct: 246 GLPEYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACG 305

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            NHTVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           +  GS  S
Sbjct: 306 NNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDTQGR--GGRSVFCGSTFS 363

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
                 G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +
Sbjct: 364 LIVNELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIMISADDTLIAWGAS 423

Query: 358 -QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
             +GELG G + QKSS +PK+V  L+ + +  V  GY H++++VD T+
Sbjct: 424 PTFGELGIGEF-QKSSTVPKEVPKLDNIKIPQVTMGYSHTVLLVDTTH 470


>gi|332021353|gb|EGI61727.1| Protein RCC2-like protein [Acromyrmex echinatior]
          Length = 488

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/431 (36%), Positives = 223/431 (51%), Gaps = 38/431 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
           M EL A      E G  K G LL CG T W+  GR+      K  +  +L +P   + L 
Sbjct: 62  MPELPAP-----EGGWGKPGTLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 116

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
              +R +A+G  + H + V  + RC  +GRN++GQLG GD  +RD PT V  L  + +  
Sbjct: 117 DAKVRLIASGPAASHSIIVTEDNRCLAFGRNDKGQLGVGDTKRRDEPTEVEALKGHTVIG 176

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACGAD 171
           A  GR+HT+ +T  G   A G NK GQ G G  +N+   +  + V+     +    CGA+
Sbjct: 177 ASCGRNHTLFLTSRGIVFAAGDNKLGQCGIG--KNDPCVVTATKVKYSGPPIVKVGCGAE 234

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-- 229
           F++ L    G  + + G P+YG LGH TD +Y   ++ +   YE  P+   +    G+  
Sbjct: 235 FSMILDIKGG--LHSFGCPEYGALGHNTDGKYFITNTKMAFHYEKAPKRIVLYVERGKDG 292

Query: 230 --------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
                    I   +CG  HTVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +  
Sbjct: 293 HAMPLDRVEITDFSCGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-- 350

Query: 282 NVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
              PP   + A   GS  S      G   M+G+ K  G+  MYPKP+ DLSGW +RC+  
Sbjct: 351 ---PPSRGVRAVHCGSTYSIAINIHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGC 407

Query: 339 GNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                 V AD S I+WG +  +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L
Sbjct: 408 SQTSVVVAADDSVIAWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTL 466

Query: 398 VIVDRTNVGER 408
           +I       ER
Sbjct: 467 MICRDDTEEER 477


>gi|195385523|ref|XP_002051454.1| GJ15738 [Drosophila virilis]
 gi|194147911|gb|EDW63609.1| GJ15738 [Drosophila virilis]
          Length = 487

 Score =  252 bits (644), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 149/411 (36%), Positives = 223/411 (54%), Gaps = 31/411 (7%)

Query: 14  TGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF-------VAAGCV 66
           T ++  G+LL  G   WD  G+R      +  + T++RP +    RF       VA+G  
Sbjct: 71  TLEKTPGQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRSVASGPT 124

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVV 125
           + H + ++++ +   +GRN  GQLG    I+  ++PTI+  L +  I +A AGR HT+ +
Sbjct: 125 AAHTILINMDRKALGFGRNPSGQLGLSQDIKLVEKPTIIPALEQLNIVQAAAGRHHTLFL 184

Query: 126 TEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
           T+ G   A G NK GQ G G+   N   P+P+      +    CGA+F+V L  ++G ++
Sbjct: 185 TDTGTVYACGENKSGQCGVGNAHPNIFTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NL 242

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKV 234
              GLP+YGQLGH TD +Y    + +   +E  P+             +  + G  IV  
Sbjct: 243 HTFGLPEYGQLGHNTDAKYFVNANKLSFHFETSPKRVVLYIEKSKEGHVTPVDGVQIVDF 302

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG NHTVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           +  GS
Sbjct: 303 ACGNNHTVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDAQGR--GGRSVYCGS 360

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             S      G LY++G+ K  G+  MYPKP+ DL+GWN+  +   N    + AD + I+W
Sbjct: 361 TFSLIINELGLLYLFGQNKKTGEANMYPKPVQDLAGWNITAIGCANTSIMISADDTLIAW 420

Query: 355 GHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           G +  +GELG G + QKSS +PK+V  ++ + +  V  GY H+ ++VD T+
Sbjct: 421 GASPTFGELGIGEF-QKSSTVPKEVPKMDNIKIPQVTMGYSHTALLVDTTH 470


>gi|307189423|gb|EFN73833.1| Protein RCC2-like protein [Camponotus floridanus]
          Length = 491

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/431 (36%), Positives = 223/431 (51%), Gaps = 38/431 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
           M EL A      E G  K G LL CG T W+  GR+      K  +  +L +P   + L 
Sbjct: 65  MPELPAP-----EGGWGKPGVLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 119

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
              IR +A+G  + H + V  + +C  +GRN++GQLG GD  +RD PT V  L  + I  
Sbjct: 120 NARIRLIASGPAASHSIIVTEDDKCLAFGRNDKGQLGVGDTKRRDEPTEVEALKGHTIIG 179

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACGAD 171
           A  GR+HT+ +T  G   A G NK GQ G G  +N+   +  S V+     +    CGA+
Sbjct: 180 ASCGRNHTLFLTSRGIVFAAGDNKLGQCGVG--KNDPCVVTASKVKYSGPPIVKVGCGAE 237

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-- 229
           F++ L    G  + + G P+YG LGH TD +Y   ++ +   YE  P+   +    G+  
Sbjct: 238 FSMILDIKGG--LHSFGCPEYGALGHNTDGKYFVTNTKMAFHYEKVPKRIVLYVERGKDG 295

Query: 230 --------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
                    I   +CG  HTVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +  
Sbjct: 296 HAIPLDRVEITDFSCGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-- 353

Query: 282 NVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
              PP   + A   GS  S      G   M+G+ K  G+  MYPKP+ DLSGW +RC+  
Sbjct: 354 ---PPSRGVRAVYCGSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGC 410

Query: 339 GNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                 V AD S I+WG +  +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L
Sbjct: 411 SQTSVVVAADDSVIAWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTL 469

Query: 398 VIVDRTNVGER 408
           +I       ER
Sbjct: 470 MICRDDTEEER 480


>gi|195115491|ref|XP_002002290.1| GI17306 [Drosophila mojavensis]
 gi|193912865|gb|EDW11732.1| GI17306 [Drosophila mojavensis]
          Length = 486

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+ A+G  + H + 
Sbjct: 76  GQLLIAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEMYRYAASGPAAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    ++  ++PT++  L +  I +  AGR HT+ +T+ G  
Sbjct: 130 INMDRKALGFGRNPSGQLGLSQDMKLVEKPTLIPALEQLNIVQVAAGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+   N   P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNAHPNIFTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  F           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFFDSQGR--GGRSVYCGSTFSLII 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G LY++G+ K  G+  MYPKP+ DL+GWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLYLFGQNKKTGEANMYPKPVQDLAGWNITAIGCANTSIMISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H++++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTVLLVDTTH 469


>gi|322803212|gb|EFZ23233.1| hypothetical protein SINV_03602 [Solenopsis invicta]
          Length = 488

 Score =  251 bits (642), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 157/431 (36%), Positives = 224/431 (51%), Gaps = 38/431 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
           M EL A      E G  K G LL CG T W+  GR+      K  +  +L +P   + L 
Sbjct: 62  MPELPAP-----EGGWGKPGTLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 116

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G  +R +A+G  + H + V  + +C  +GRN++GQLG GD  +RD PT V  L  + +  
Sbjct: 117 GARVRLIASGPAASHSIIVTEDNKCMAFGRNDKGQLGVGDTKRRDEPTEVEALKGHTVIG 176

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACGAD 171
           A  GR+HT+ +T  G   A G NK GQ G G  +N+   +  + V+     +    CGA+
Sbjct: 177 AFCGRNHTLFLTSRGIVFAAGDNKLGQCGVG--KNDPCIMTATKVKYSGPPIVKVGCGAE 234

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-- 229
           F++ L    G  + + G P+YG LGH TD +Y   ++ +   YE  P+   +    G+  
Sbjct: 235 FSMILDLKGG--LHSFGCPEYGALGHNTDGKYFITNTKMAFHYEKVPKRIVLYVERGKDG 292

Query: 230 --------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
                    I   +CG  HTVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +  
Sbjct: 293 HATPLDRVEITDFSCGHYHTVAIDSKNRAFSWGFGGIGRLGHNEQRDELVPRLIKFLE-- 350

Query: 282 NVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
              PP   + A   GS  S      G   M+G+ K  G+  MYPKP+ DLSGW +RC+  
Sbjct: 351 ---PPSRGVRAVHCGSTYSIAINVHGSALMFGQTKRTGEANMYPKPIQDLSGWEIRCVGC 407

Query: 339 GNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                 V AD S I+WG +  +GELG+G   +KSS  P +V  LEG+++ +V CG  H+L
Sbjct: 408 SQTSVVVAADDSVIAWGPSPTFGELGFGEM-RKSSTTPMEVKALEGLYITAVTCGLSHTL 466

Query: 398 VIVDRTNVGER 408
           +I       ER
Sbjct: 467 MICRDDTEEER 477


>gi|157119218|ref|XP_001653306.1| regulator of chromosome condensation [Aedes aegypti]
 gi|108875404|gb|EAT39629.1| AAEL008575-PA [Aedes aegypti]
          Length = 478

 Score =  251 bits (640), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 155/426 (36%), Positives = 233/426 (54%), Gaps = 45/426 (10%)

Query: 4   LEAEKMVEE--ETGKEKGGELLFCGSTCWDAVGRR---KGALDGNLVSPTRLRPLVGVDI 58
           +  EK+ E+  +T  ++ G+LL  G   WD  GR+   KG         T++RP +    
Sbjct: 51  INQEKLPEDLLKTYDKEPGKLLMAGMVTWDMTGRKAPSKGT--------TKIRPALNSFH 102

Query: 59  RFVA-------AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           RF +       +GC S H V + ++ +   +GRN+ GQLG  +    ++PT V+ L +  
Sbjct: 103 RFTSETYRSAVSGCSSAHSVLITLDRKALAFGRNQFGQLGQSELRTFEKPTPVTGLEEVN 162

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGA 170
           + +A  GR+HT+ +++ G   A G NK GQ G G+ +  I + + +      +   ACGA
Sbjct: 163 VIQAACGRNHTLFLSDTGVVYACGDNKSGQCGVGNTQPTILKATRLNYAGPPIIKVACGA 222

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ L  ++G ++ + GLP+YGQLGH T+ +Y    +S K+++  +  P+ I     +T
Sbjct: 223 EFSMILD-IKG-NVYSFGLPEYGQLGHNTEGKYFV--TSTKMSFHFETSPKKIVLYVEKT 278

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       IV  +CG NHTVA+DSK   ++WGFGG GRLGH EQKDE VPR +  F
Sbjct: 279 KDGHVTPIDDVKIVDFSCGNNHTVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPRLIKFF 338

Query: 279 --QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
             Q   VL     +  GS  S      G LY++G+ K  G+  MYPKP+ DL+GWN+  +
Sbjct: 339 DIQNRKVL----RVFCGSSFSLAITDIGALYLFGQNKKTGEANMYPKPVQDLAGWNITSI 394

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              N    + AD S ISWG +  YGELG G    KSS+ PK V   EGM +  V+ GY H
Sbjct: 395 GVANTSIVISADDSLISWGASPTYGELGLGDL-IKSSSTPKTVSRCEGMKIPQVSMGYSH 453

Query: 396 SLVIVD 401
           +L++V+
Sbjct: 454 TLLLVN 459


>gi|269973065|emb|CBE67077.1| CG9135-PA [Drosophila phaeopleura]
          Length = 486

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 146/415 (35%), Positives = 224/415 (53%), Gaps = 33/415 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++PTI+  L +  + +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYSPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGR--GGRSVFCGSTFSLVV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN--VGERLDQV 412
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+    ++ D++
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTHEATKQKFDKL 479


>gi|269972838|emb|CBE66999.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score =  250 bits (638), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++PTI+  L +  + +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGR--GGRSVFCGSTFSLVV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469


>gi|269972828|emb|CBE66994.1| CG9135-PA [Drosophila ananassae]
 gi|269972834|emb|CBE66997.1| CG9135-PA [Drosophila ananassae]
 gi|269972836|emb|CBE66998.1| CG9135-PA [Drosophila ananassae]
 gi|269972840|emb|CBE67000.1| CG9135-PA [Drosophila ananassae]
 gi|269972842|emb|CBE67001.1| CG9135-PA [Drosophila ananassae]
 gi|269972915|emb|CBE67002.1| CG9135-PA [Drosophila ananassae]
 gi|269972917|emb|CBE67003.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++PTI+  L +  + +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGR--GGRSVFCGSTFSLVV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469


>gi|410898904|ref|XP_003962937.1| PREDICTED: protein RCC2 homolog [Takifugu rubripes]
          Length = 494

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 151/417 (36%), Positives = 220/417 (52%), Gaps = 30/417 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H +
Sbjct: 76  GQLLVFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL 135

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  L+ + +  A  GR+HT+ +T++G+ 
Sbjct: 136 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDNGSV 195

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG  S    +  P+ +      +   ACGA+F++ +      ++ + G P
Sbjct: 196 YSFGENKLGQLGQCSQTYAVLSPALISYDGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 253

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
           +YGQLGH +D ++  +   ++   E  PR  AI            +    +  VACG NH
Sbjct: 254 EYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAIFIEKSKDGQVMPVPNVVVRDVACGANH 313

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
           T+ +DS+  V++WGFGGYGRLGH EQKDE VPR + +F      P      I  G   S 
Sbjct: 314 TLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLIKLFD----FPGRGASQIYTGYQCSF 369

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQ 358
                G L  WG    + +  MYPK + DL GW +R +  G     + AD S ISWG + 
Sbjct: 370 AVTENGSLSFWGVTNTSRESTMYPKAVQDLGGWKIRSLACGKSSIILAADESTISWGPSP 429

Query: 359 Y-GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
             GELGYG    KSS   ++V  L+G++V  V  GY HSLVI   D     ERL ++
Sbjct: 430 TCGELGYGDNKPKSSTTAQEVKTLDGVYVEKVMMGYSHSLVIARQDTEQEKERLKKL 486


>gi|194760185|ref|XP_001962322.1| GF14497 [Drosophila ananassae]
 gi|190616019|gb|EDV31543.1| GF14497 [Drosophila ananassae]
 gi|269972830|emb|CBE66995.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++PTI+  L +  + +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGR--GGRSVFCGSTFSLVV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469


>gi|269973011|emb|CBE67050.1| CG9135-PA [Drosophila atripex]
          Length = 486

 Score =  249 bits (637), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 145/405 (35%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++PTI+  L +  + +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G+    I  P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNTHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGR--GGRSVFCGSTFSLVV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469


>gi|269972832|emb|CBE66996.1| CG9135-PA [Drosophila ananassae]
          Length = 486

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 219/405 (54%), Gaps = 31/405 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-------LVGVDIRFVAAGCVSCHCVA 72
           G+LL  G   WD  G+R      +  + T++RP             R+VA+G  + H + 
Sbjct: 76  GQLLLAGMVTWDLTGKR------DRKNVTKVRPNLYSFHRFTDEKYRYVASGPSAAHTIL 129

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++ +   +GRN  GQLG    I+  ++PTI+  L +  + +A  GR HT+ +T+ G  
Sbjct: 130 INMDRKAMGFGRNPSGQLGLSQDIKLVEKPTIIPALEQENVVQAAVGRHHTLFLTDTGTV 189

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            A G NK GQ G G S  N   P+P+      +    CGA+F+V L  ++G ++   GLP
Sbjct: 190 YACGENKSGQCGVGNSHANIYTPTPINYRGPPIIRIGCGAEFSVILD-IKG-NLHTFGLP 247

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGETIVKVACGTNH 240
           +YGQLGH TD +Y    + +   +E  P+             +  + G  IV  ACG NH
Sbjct: 248 EYGQLGHNTDAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNH 307

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           TVA+DSK  VY+WGFGG+GRLGH E KDE VPR +  +           +  GS  S   
Sbjct: 308 TVAIDSKKRVYSWGFGGFGRLGHAEPKDEMVPRLMKFYDAQGR--GGRSVFCGSTFSLVV 365

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QY 359
              G L+++G+ K  G+  MYPKP+ DLSGWN+  +   N    + AD + I+WG +  +
Sbjct: 366 NELGLLFLFGQNKKTGEANMYPKPVQDLSGWNITDIGCANTSIVISADDTLIAWGASPTF 425

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           GELG G + QKSS +PK+V  ++G+ +  V  GY H+ ++VD T+
Sbjct: 426 GELGIGEF-QKSSTVPKEVPKMDGIKIPQVTMGYSHTALLVDTTH 469


>gi|209154482|gb|ACI33473.1| RCC2 homolog [Salmo salar]
          Length = 496

 Score =  249 bits (635), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 149/417 (35%), Positives = 220/417 (52%), Gaps = 30/417 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H +
Sbjct: 78  GQLLIFGATNWDLIGRKEVPKAQAAFRNLGQNLWGPHRYGCLNDVQVSSVVSGPCAAHSL 137

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  L+   +  A  GR+HT+ +TE G +
Sbjct: 138 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGTA 197

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG G+  + +  P+ ++     +   ACGA+F++ +      ++ + G P
Sbjct: 198 YSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 255

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
           +YGQLGH +D ++  +   ++   E   R   I            +    +  VACG NH
Sbjct: 256 EYGQLGHNSDGKFIARAQRIEFDCETIARRVTIFIEKSKDGQVTPVPNVVVRDVACGGNH 315

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
           T+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I  G   S 
Sbjct: 316 TLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYTGYQCSF 371

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
                G L+ WG    + +  MYPK + DL GW +R +  G     + AD S ISWG + 
Sbjct: 372 AVNEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSP 431

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
            +GELGYG    KSS   ++V  L+G++   V  GY HSLVI   D     E+L ++
Sbjct: 432 TFGELGYGDNKAKSSTTAQEVKSLDGVYAEQVVMGYAHSLVIARQDTPQEQEKLKKL 488


>gi|299471641|emb|CBN76863.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 582

 Score =  247 bits (631), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 156/398 (39%), Positives = 212/398 (53%), Gaps = 24/398 (6%)

Query: 22  LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           +LF G T W A+GRR    +G+++ P RL       I+ VA+G  +CH V +DV+G  YT
Sbjct: 119 VLFIGGTDWTALGRR--PTEGDILCPKRLLSFPK-KIKSVASGPTACHSVCIDVQGGVYT 175

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN-SLAFGWNKHG 140
           WGRNE G LGHGD   R  PT+V+ LS  ++K+A  G++HT ++ E+G   +  G     
Sbjct: 176 WGRNEFGGLGHGDTAPRAHPTLVAALSGTRMKQASCGKTHTGILAENGTLYMMGGGKLGQ 235

Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
                ++ +  EP  V      V   ACGA+FT  + +     +L  G PQ GQLG GT 
Sbjct: 236 LGLGRAVESCTEPKAVEVPGGTVEKVACGAEFTAIIDNR--GRLLTFGSPQDGQLGGGTT 293

Query: 201 NEYNTK-----------DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS--K 247
            E+  K            + V   +    R +AI    G  +  +ACG +H VAV+   +
Sbjct: 294 GEFIEKAGKISYDLVLAPAVVPTFFSKDARTKAIEEFRGVELADIACGKSHGVAVEKGPR 353

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
             V+TWGFGGYGRLGH  Q  E  PR VDV  R   L    V +AG+  S      G L+
Sbjct: 354 ARVFTWGFGGYGRLGHACQDQELRPRMVDVLARMTHLKVTKV-AAGAGCSLAITENGHLF 412

Query: 308 MWGKLKN--NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
            WGKL N   G+  MYPK + DLS W  R +   N    V A++S ISWG +  GELGYG
Sbjct: 413 YWGKLPNAPRGEATMYPKIVEDLSNWQTRSVAGSNGALLVAAETSTISWGTSVAGELGYG 472

Query: 366 PY--GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                 ++S  PK V+ LEG+ V+ VA G GHSL++ +
Sbjct: 473 EEIGTPRTSTKPKLVNALEGLTVMQVAMGLGHSLLLAE 510


>gi|307214889|gb|EFN89757.1| Protein RCC2-like protein [Harpegnathos saltator]
          Length = 486

 Score =  246 bits (629), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 154/420 (36%), Positives = 217/420 (51%), Gaps = 34/420 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRR------KGALDGNLVSPTRLRPLV 54
           M EL A      E G  K G LL CG T W+  GR+      K  +  +L +P   + L 
Sbjct: 60  MPELPAP-----EGGWGKPGTLLMCGLTNWEMAGRKAPPKGVKANVGRSLWTPHTFKNLN 114

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
              +R +A+G  + H + V  + RC  +G+N++GQLG GD  +RD PT V  L  + +  
Sbjct: 115 NARVRLIASGPAASHNIIVTEDDRCLVFGKNDKGQLGIGDTKRRDEPTEVEALKGHTVIG 174

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFT 173
           A  GR+HT+ +T  G   A G NK GQ G G S    +  + V+     +    CGA+F+
Sbjct: 175 ASCGRNHTLFLTSRGIVFAAGDNKLGQCGVGKSDACIVTATKVKYSGPPIVKIGCGAEFS 234

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------I 223
           + L    G  + + G P+YG LGH TD +Y   ++ +   YE  P+             +
Sbjct: 235 MILDIKGG--LHSFGCPEYGALGHNTDGKYFITNTKMAFHYEKVPKRIVLYVERTKDGHV 292

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L    I   +CG  HTVA+DSK   ++WGFGG GRLGH EQ+DE VPR +   +    
Sbjct: 293 TPLDRVEITDFSCGHYHTVAIDSKSRAFSWGFGGVGRLGHNEQRDELVPRLIKFLE---- 348

Query: 284 LPPE---AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
            PP      +  GS  S      G   M+G+ K  G+  MYPKP+ DLSGW +RC+    
Sbjct: 349 -PPNRGVRTVHCGSTYSIAINVHGFALMFGQSKRTGEANMYPKPIQDLSGWEIRCVGCSQ 407

Query: 341 MHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               V AD S I+WG +  +GELG+G   +KSS  P +V  LEG++V +V CG  H+L+I
Sbjct: 408 TSVVVAADDSVIAWGASPTFGELGFGEM-RKSSTTPMEVKALEGLYVTAVTCGMSHTLMI 466



 Score = 41.2 bits (95), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 5/92 (5%)

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSG---NMHHFVGADSSCISWGHAQYGELGYGPYGQK 370
           N G     P    +L+   +R + SG   + +  V  D  C+ +G    G+LG G   ++
Sbjct: 99  NVGRSLWTPHTFKNLNNARVRLIASGPAASHNIIVTEDDRCLVFGKNDKGQLGIGDTKRR 158

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               P +V+ L+G  VI  +CG  H+L +  R
Sbjct: 159 DE--PTEVEALKGHTVIGASCGRNHTLFLTSR 188


>gi|193671838|ref|XP_001951667.1| PREDICTED: protein RCC2 homolog [Acyrthosiphon pisum]
          Length = 477

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 149/404 (36%), Positives = 216/404 (53%), Gaps = 27/404 (6%)

Query: 15  GKEKGGELLFCGSTCWDAVGRR---KG--ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
           G +  G +L  G T WD  GR+   KG  ++  NL  P    PL    IR V + C S H
Sbjct: 59  GPDHIGVVLLTGGTNWDLNGRKSMPKGCKSVGRNLYEPHLFGPLKDNRIRLVVSSCNSSH 118

Query: 70  CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            + +  EG+  + GRNE+GQLG  D ++RD PT +  L  + I  A  GR HT+++T+ G
Sbjct: 119 TIFITEEGKALSLGRNEKGQLGVKDLLRRDIPTPIEGLPDHAIVNAATGRGHTLLLTDRG 178

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNA 187
              + G NK+ Q G  S +  +  + +R   +   +    CGA+F++ L      ++ + 
Sbjct: 179 AVYSCGDNKNSQCGVKS-KEPVVTTAMRVKYNGPPIVKVGCGAEFSILLDC--KGTLYSF 235

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP---------RAIAALAGETIVKVACGT 238
           GLP+YGQLGH T+ EY  +  ++  A    P+P           +  L    I   ACGT
Sbjct: 236 GLPEYGQLGHNTNGEYIERAGAINFATVKLPKPIITFVEKTKNKVEILPKPEIRDFACGT 295

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRNNVLPPEAVISAGSVN 296
           NHTVA+D     Y+WGFGGYGRLGH E KDE  PR +  F  QR+ V      ++ G   
Sbjct: 296 NHTVAIDDHKKAYSWGFGGYGRLGHSEPKDELQPRLIKYFDVQRSGV----KHVACGPAF 351

Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH 356
           S      G +Y++G++ + G+  MYPKP+ DL GWNLR + + ++     AD SCI WG 
Sbjct: 352 SIAINEFGAVYLFGQMSSRGEANMYPKPVQDLHGWNLRSIGTCSIGLVAAADDSCIVWGS 411

Query: 357 -AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               GELG G   +KSSA P ++  L+G++V  V CG  H+ ++
Sbjct: 412 GTSSGELGLGEL-KKSSAKPCEMKKLDGLYVEQVTCGSAHTFLL 454


>gi|390370006|ref|XP_001201663.2| PREDICTED: protein RCC2 homolog, partial [Strongylocentrotus
           purpuratus]
          Length = 412

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 161/411 (39%), Positives = 212/411 (51%), Gaps = 32/411 (7%)

Query: 20  GELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           G LLF G T WD +GR K    A  GN     R +   G + R V    V        V 
Sbjct: 9   GTLLFSGGTNWDLIGRHKLTKAAASGN----DREQLGHGEEYRRVVPTMVEGSEDHHMVS 64

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
             C    RN+R QLGHGD  +RD PT+V  L  + I  A  GR+HT+ +T+DG   AFG 
Sbjct: 65  AAC----RNDREQLGHGDDYRRDVPTLVEGLEDHHIVTAACGRNHTMCLTDDGTVFAFGD 120

Query: 137 NKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N+ GQ G G   + +  P       S +   ACGADF++ L       I + G  +Y QL
Sbjct: 121 NRMGQCGIGVQSSSVGTPCKPNYYGSPIVKVACGADFSMILDC--KGVIHSFGSQEYSQL 178

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-----------LAGETIVKVACGTNHTVAV 244
           GH T+ +Y+   S  KL+ E    P+ +             L G  I  +ACG NH+VA+
Sbjct: 179 GHNTNGQYSVTAS--KLSSECVSTPKKVTCFLEKGREGKKYLEGTVIKDIACGNNHSVAM 236

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
           D +  V+TWGFGGYGRLGH++  DE VPR V  F+    L     I+AGS         G
Sbjct: 237 DMQKRVFTWGFGGYGRLGHQKPDDEPVPRSVKFFEMP--LKGAKTINAGSSYCMVVTEQG 294

Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELG 363
           Q++ WG+ K  G+  MYPKP+ DLSGWN+R +   N    V AD + ISWG +  YGEL 
Sbjct: 295 QVFFWGQAKTTGEATMYPKPVQDLSGWNVRSIGCSNHSIVVAADDAIISWGPSPTYGELA 354

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
           YG    KSS + KK   L+ ++V  + CG GHSL I   D     E L+++
Sbjct: 355 YGEADSKSSTVAKKARPLDNIYVHHLTCGAGHSLFIARDDTEKDKEELEKL 405


>gi|345306595|ref|XP_001506220.2| PREDICTED: protein RCC2-like [Ornithorhynchus anatinus]
          Length = 426

 Score =  244 bits (622), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 152/392 (38%), Positives = 217/392 (55%), Gaps = 37/392 (9%)

Query: 29  CWDAVGR-RKGAL---DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
           C   +GR  KG L   D   V   +L  ++  ++  V+A C   H +A+         GR
Sbjct: 28  CGANLGRNEKGQLGHGDTKRVEAPKLIEVLSNEV-IVSAACGRNHTLALT------DLGR 80

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
           NE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +TE G+  AFG NK GQLG 
Sbjct: 81  NEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGL 140

Query: 145 GSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
           G+  + I PSP + + +   +T  ACGA+F++ +      ++ + G P+YGQLGH +D +
Sbjct: 141 GNQTDAI-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGCPEYGQLGHNSDGK 197

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVDSKGYV 250
           +  +  + ++ Y+ +  PR +A    +T            +  VACGTNHT+ +DS+  V
Sbjct: 198 FIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTNHTLVLDSQKRV 255

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVISAGSVNSSCTAGGGQLYM 308
           ++WGFGGYGRLGH EQKDE VPR V +F      P    A I AG   S   +  G L+ 
Sbjct: 256 FSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGAAHIYAGYTCSFAVSEIGGLFF 311

Query: 309 WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGYGPY 367
           WG    + +  MYPK + DL GW +R +  G     V AD S ISWG +  +GELGYG +
Sbjct: 312 WGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGDH 371

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             KSS   ++V  L+G++   VA GY HSLVI
Sbjct: 372 KPKSSTAAQEVKTLDGIYTEQVAMGYSHSLVI 403



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 170/361 (47%), Gaps = 65/361 (18%)

Query: 78  RC-YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           RC    GRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +T+       G 
Sbjct: 27  RCGANLGRNEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALTD------LGR 80

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N+ GQLG G  +    P  +  L +EV  + ACG + T+ L+  E  S+   G  + GQL
Sbjct: 81  NEKGQLGHGDTKRVEAPKLIEVLSNEVIVSAACGRNHTLALT--ETGSVFAFGENKMGQL 138

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G  N+ +   S  ++ Y  QP            I K+ACG   ++ +D KG +Y++G 
Sbjct: 139 GLG--NQTDAIPSPAQIMYNGQP------------ITKMACGAEFSMIMDCKGNLYSFGC 184

Query: 256 GGYGRLGH--------REQKDEW----VPRRVDVF----QRNNVLP-PEAVI---SAGSV 295
             YG+LGH        R Q+ E+    VPRRV +F    +   +LP P  V+   + G+ 
Sbjct: 185 PEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGTN 244

Query: 296 NSSCTAGGGQLYMWG-----KLKN-NGDDWMYPK--PLMDLSGWNLRCMDSGNMHHFVGA 347
           ++       +++ WG     +L +    D M P+   L D  G        G  H + G 
Sbjct: 245 HTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPG-------RGAAHIYAG- 296

Query: 348 DSSCISWGHAQYGEL---GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
             +C S+  ++ G L   G     ++S+  PK V  L G  + S+ACG    +V  D + 
Sbjct: 297 -YTC-SFAVSEIGGLFFWGATNTSRESTMYPKAVQDLCGWKIRSLACGKSSIIVAADEST 354

Query: 405 V 405
           +
Sbjct: 355 I 355


>gi|209152366|gb|ACI33109.1| RCC2 homolog [Salmo salar]
          Length = 496

 Score =  243 bits (621), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 150/417 (35%), Positives = 221/417 (52%), Gaps = 30/417 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H +
Sbjct: 78  GQLLIFGATNWDLIGRKEVPKAQVAFRNLGQNLWGPHRYGSLSDVQVSSVVSGPCAAHSL 137

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  L+   +  A  GR+HT+ +TE G +
Sbjct: 138 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEALADEVVVAAACGRNHTLALTEGGTA 197

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG G+  + +  P+ ++     +   ACGA+F++ +      ++ + G P
Sbjct: 198 YSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 255

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
           +YGQLGH +D ++  +   ++   E   R  AI            +    +  VACG NH
Sbjct: 256 EYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVVRDVACGGNH 315

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
           T+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I  G   S 
Sbjct: 316 TLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYTGYQCSF 371

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
                G L+ WG    + +  MYPK + DL GW +R +  G     + AD S ISWG + 
Sbjct: 372 AVNEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSP 431

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
            +GELGYG    KSS   ++V  L+G++   V  GY H LVIV  D     E+L ++
Sbjct: 432 TFGELGYGDNKAKSSTTAQEVKTLDGVYTEQVVMGYAHCLVIVRQDTPQEQEKLKKL 488


>gi|209155120|gb|ACI33792.1| RCC2 homolog [Salmo salar]
          Length = 569

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 147/411 (35%), Positives = 217/411 (52%), Gaps = 28/411 (6%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H +
Sbjct: 151 GQLLIFGATNWDLIGRKEVPKAQVAFRNLGQNLWGPHRYSSLSDVQVSSVVSGPCAAHSL 210

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRNE+GQLGHGD  + + P ++  L+   +  A  GR+HT+ +TE G +
Sbjct: 211 LITTEGKLWSWGRNEKGQLGHGDTKRLEAPKLIEPLADEVVVAAACGRNHTLALTEGGTA 270

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG G+  + +  P+ ++     +   ACGA+F++ +      ++ + G P
Sbjct: 271 YSFGENKLGQLGQGNQTDAVLSPALIQYNGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 328

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNH 240
           +YGQLGH +D ++  +   ++   E   R  AI            +    +  VACG NH
Sbjct: 329 EYGQLGHNSDGKFIARAQRIEFDCETIARRVAIFIEKSKDGQVTPVPNVVVRDVACGGNH 388

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
           T+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I  G   S 
Sbjct: 389 TLILDSQKRVFSWGFGGYGRLGHTEQKDEMVPRLVKLFD----FPGRGASQIYTGYQCSF 444

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA- 357
                G L+ WG    + +  MYPK + DL GW +R +  G     + AD S ISWG + 
Sbjct: 445 AVNEMGGLFFWGVTNTSRESTMYPKAVQDLCGWKVRSLACGKSSIVIAADDSTISWGPSP 504

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
            +GELGYG    KSS   ++V  L+G++   V  GY H LVI  +    E+
Sbjct: 505 TFGELGYGDNKAKSSTTAQEVKTLDGVYTEQVVMGYAHCLVIARQDTPQEQ 555


>gi|301625970|ref|XP_002942173.1| PREDICTED: protein RCC2 homolog [Xenopus (Silurana) tropicalis]
          Length = 456

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 145/390 (37%), Positives = 213/390 (54%), Gaps = 34/390 (8%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 76  VTEPEHSKEKIKLEGSKAKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 135

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R VAAG  + H + + VEG+ ++WGRN++GQLGHGD  + D P ++  L     
Sbjct: 136 LTGVQVRTVAAGPCAAHSLLITVEGKLWSWGRNDKGQLGHGDVKRIDVPKLIESLKGEVF 195

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
                GR+HT+ +TE+G+  AFG NK GQLG G+ + +  PSP + L +   +T  ACGA
Sbjct: 196 VHGACGRNHTLALTENGSVYAFGENKMGQLGLGN-KTDAVPSPAQILYNGQPITKVACGA 254

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D +Y  +  + ++ Y+ +   R IA    +T
Sbjct: 255 EFSMIMDCK--GNLYSFGCPEYGQLGHNSDGKYIAR--AQRIEYDCELIARRIAIFIEKT 310

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  +ACG NH++ +DS+  V++WGFGGYGRLGH EQ+DE VPR V +F
Sbjct: 311 KDGQVLPVPNVVVRDIACGINHSLVLDSQKRVFSWGFGGYGRLGHSEQRDEMVPRLVKLF 370

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
                 P      I AG+  S   +  G L+ WG    + D  MYPK + DL GW +R +
Sbjct: 371 D----FPGRGASQIYAGATCSFAVSEMGGLFFWGATNTSRDSTMYPKTVQDLCGWKVRNL 426

Query: 337 DSGNMHHFVGADSSCISWGHA-QYGELGYG 365
             G     + AD S ISWG +  +GEL  G
Sbjct: 427 ACGKSSIILAADESTISWGPSPTFGELFLG 456


>gi|13436272|gb|AAH04933.1| RCC2 protein, partial [Homo sapiens]
          Length = 351

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/337 (40%), Positives = 194/337 (57%), Gaps = 26/337 (7%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           ++WGRNE+GQLGHGD  + + P ++  LS   I  A  GR+HT+ +TE G+  AFG NK 
Sbjct: 1   WSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKM 60

Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++ + G P+YGQLGH
Sbjct: 61  GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMIMDC--KGNLYSFGCPEYGQLGH 117

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
            +D ++  +  + ++ Y+ +  PR +A    +T            +  VACG NHT+ +D
Sbjct: 118 NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 175

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
           S+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I AG   S   +  
Sbjct: 176 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGASQIYAGYTCSFAVSEV 231

Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
           G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG +  +GEL
Sbjct: 232 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 291

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           GYG +  KSS   ++V  L+G+    VA GY HSLVI
Sbjct: 292 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVI 328



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 133/303 (43%), Gaps = 54/303 (17%)

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQ 191
           ++G N+ GQLG G  +    P  +  L  EV  + ACG + T+ L+  E  S+   G  +
Sbjct: 2   SWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAACGRNHTLALT--ETGSVFAFGENK 59

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            GQLG G  N+ +   S  ++ Y  QP            I K+ACG   ++ +D KG +Y
Sbjct: 60  MGQLGLG--NQTDAVPSPAQIMYNGQP------------ITKMACGAEFSMIMDCKGNLY 105

Query: 252 TWGFGGYGRLGH--------REQKDEW----VPRRVDVF----QRNNVLP-PEAVI---S 291
           ++G   YG+LGH        R Q+ E+    VPRRV +F    +   +LP P  V+   +
Sbjct: 106 SFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVA 165

Query: 292 AGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPK--PLMDLSGWNLRCMDSGNMHH 343
            G+ ++       +++ WG     +L +    D M P+   L D  G     + +G    
Sbjct: 166 CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGASQIYAGYTCS 225

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           F V        WG             ++S+  PK V  L G  + S+ACG    +V  D 
Sbjct: 226 FAVSEVGGLFFWGATNTS--------RESTMYPKAVQDLCGWRIRSLACGKSSIIVAADE 277

Query: 403 TNV 405
           + +
Sbjct: 278 STI 280


>gi|47212325|emb|CAF91263.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 416

 Score =  239 bits (610), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 146/407 (35%), Positives = 218/407 (53%), Gaps = 21/407 (5%)

Query: 20  GELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G+LL  G+T WD +GR++          L  NL  P R   L  V +  V +G  + H +
Sbjct: 9   GQLLVFGATNWDLIGRKEVPKQQAAFRNLGQNLWGPHRYGCLNDVQVSCVVSGPCAAHSL 68

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +  EG+ ++WGRN++GQLGHGD  + + P ++  L+ + +  A  GR+HT+ +T+DG+ 
Sbjct: 69  LITAEGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLADHLVVAAACGRNHTLALTDDGSV 128

Query: 132 LAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
            +FG NK GQLG GS    +  P+ +      +   ACGA+F++ +      ++ + G P
Sbjct: 129 YSFGENKLGQLGQGSQTYAVLSPALISYDGQPLVKVACGAEFSMVVDC--KGNLYSFGCP 186

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           +YGQLGH +D ++  +   ++   E  PR  AI  +      +V    N  + +DS+  V
Sbjct: 187 EYGQLGHNSDGKFIARAQRIEFDCEIIPRRIAI-FIEKSKDGQVMPVPNVVLVLDSQKRV 245

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYM 308
           ++WGFGGYGRLGH EQKDE VPR + +F      P      I  G   S   +  G L+ 
Sbjct: 246 FSWGFGGYGRLGHAEQKDEMVPRLIKLFD----FPGRGASQIYTGYQCSFAVSENGGLFF 301

Query: 309 WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY-GELGYGPY 367
           WG    + +  MYPK + DL GW +R +  G     + AD S I+WG +   GELGYG  
Sbjct: 302 WGVTNTSRESTMYPKVVPDLCGWKIRSLACGKSSIIIAADESTITWGPSPTCGELGYGDN 361

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
             KSS   ++V  L+G++V  V  GY HSLVI   D     ERL ++
Sbjct: 362 KPKSSTTAQEVKTLDGVYVEKVMMGYSHSLVIARQDTEQEKERLKKL 408


>gi|8655683|emb|CAB94882.1| hypothetical protein [Homo sapiens]
          Length = 333

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/337 (38%), Positives = 192/337 (56%), Gaps = 26/337 (7%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  LS   I  A  
Sbjct: 6   VRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLIEGLSHEVIVSAAC 65

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVW 175
           GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA+F++ 
Sbjct: 66  GRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMI 124

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET----- 230
           +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T     
Sbjct: 125 MDC--KGNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQI 180

Query: 231 -------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F     
Sbjct: 181 LPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD---- 236

Query: 284 LPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
            P      I AG   S   +  G L+ WG    + +  MYPK + DL GW +R +  G  
Sbjct: 237 FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKS 296

Query: 342 HHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKK 377
              V AD S ISWG +  +GELGYG +  KSS   ++
Sbjct: 297 SIIVAADESTISWGPSPTFGELGYGDHKPKSSTAAQR 333


>gi|157137553|ref|XP_001664005.1| Bj1 protein, putative [Aedes aegypti]
 gi|108869688|gb|EAT33913.1| AAEL013820-PA [Aedes aegypti]
          Length = 484

 Score =  231 bits (589), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 148/423 (34%), Positives = 222/423 (52%), Gaps = 40/423 (9%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
           AEL  + M  +   ++  G+LL  G   W+  G  K     N+      RP +    RF 
Sbjct: 60  AELSDKLM--KRFDEQPPGKLLIAGLVTWELTGGPKAKPVSNV------RPNLYSFHRFT 111

Query: 62  A-------AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           +        GC S H V + ++ +   +GRN+ GQLG  D    ++PT V+ L   K+ +
Sbjct: 112 SEMYRSAVTGCCSAHSVLITMDRKALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDVKVVQ 171

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFT 173
           A  GR+HT+ +T++G   A G N+HGQ G G     + + + ++     +   ACGA+F+
Sbjct: 172 AACGRNHTLFLTDNGVVYACGDNRHGQCGVGHTNPTVLKATRLKYTGPPIVKVACGAEFS 231

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
           + L       + + GLP++GQLGH TD +Y    ++ +LAY  +  PR I     +T   
Sbjct: 232 MILDI--NGRLYSFGLPEHGQLGHNTDGKYFI--TANRLAYHYETVPRQIVTYVEKTNEG 287

Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--Q 279
                    I+  ACG NHTVA+DSK   ++WGFGGYGRLGH   +DEWVPR    F  Q
Sbjct: 288 RTIPIEDVQILDFACGNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQ 347

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
           +  VL     +  G+  S      G ++++G+ + N D  MYPKP+ DL+GW +  + +G
Sbjct: 348 KRKVL----RVFCGTAFSVAITDVGCVHLFGRNRVNADANMYPKPVQDLTGWKVTSIGAG 403

Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                + AD S I+WG +  YGELG G    KSS+ PK V  +EG+ +   A G  HSL+
Sbjct: 404 YSSILISADDSLIAWGASPTYGELGLGDE-VKSSSKPKLVPGMEGVKISHAAVGQSHSLL 462

Query: 399 IVD 401
           +V+
Sbjct: 463 LVN 465


>gi|157137551|ref|XP_001664004.1| Bj1 protein, putative [Aedes aegypti]
 gi|108869687|gb|EAT33912.1| AAEL013819-PA [Aedes aegypti]
          Length = 484

 Score =  231 bits (588), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 147/423 (34%), Positives = 222/423 (52%), Gaps = 40/423 (9%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
           AEL  + M  +   ++  G+LL  G   W+  G  K     N+      RP +    RF 
Sbjct: 60  AELSDKLM--KRFDEQPPGKLLIAGLVTWELTGGPKAKPVSNV------RPNLYSFHRFT 111

Query: 62  A-------AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           +        GC S H V + ++ +   +GRN+ GQLG  D    ++PT V+ L   K+ +
Sbjct: 112 SEMYRSAVTGCCSAHSVLITMDRKALAFGRNQHGQLGQSDLRTFEKPTPVNGLKDVKVVQ 171

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEVTATACGADFT 173
           A  GR+HT+ +T++G   A G N+HGQ G G     + + + ++     +   ACGA+F+
Sbjct: 172 AACGRNHTLFLTDNGVVYACGDNRHGQCGVGHTNPTVLKATRLKYTGPPIVKVACGAEFS 231

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET--- 230
           + L       + + GLP++GQLGH TD +Y    ++ +LAY  +  PR I     +T   
Sbjct: 232 MILDI--NGRLYSFGLPEHGQLGHNTDGKYFI--TANRLAYHYETVPRQIVTYVEKTNEG 287

Query: 231 ---------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--Q 279
                    I+  ACG NHTVA+DSK   ++WGFGGYGRLGH   +DEWVPR    F  Q
Sbjct: 288 RTIPIEDVQILDFACGNNHTVAIDSKNRAFSWGFGGYGRLGHASPQDEWVPRLNKYFDIQ 347

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
           +  VL     +  G+  S      G ++++G+ + N D  MYPKP+ DL+GW +  + +G
Sbjct: 348 KRKVL----RVFCGTAFSVAITDVGCVHLFGRNRVNADANMYPKPVQDLTGWKVTSIGAG 403

Query: 340 NMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                + AD S I+WG +  YGELG G    KS++ PK V  +EG+ +   A G  HSL+
Sbjct: 404 YSSILISADDSLIAWGASPTYGELGLGDV-VKSTSKPKLVPGMEGVKISHAAVGQSHSLL 462

Query: 399 IVD 401
           +V+
Sbjct: 463 LVN 465


>gi|328767985|gb|EGF78033.1| hypothetical protein BATDEDRAFT_91148 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 497

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/422 (34%), Positives = 220/422 (52%), Gaps = 30/422 (7%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNL-------VSPTRLRPLV 54
           A +  E   +        G L+FCG+T WD VGR+       +        +P       
Sbjct: 10  AGMSPETSADISKNSHSTGGLVFCGATIWDWVGRKSSTNSKTMDFGSHEFPAPHIYGAAA 69

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
            +++  V + C S H V +D +G  YT+GRN+ GQLG G    R  P  ++ +      K
Sbjct: 70  YINVVDVFSHCTSAHAVIIDDQGAAYTFGRNQNGQLGDGTTTSRSDPFRIN-IKGETFVK 128

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGAD 171
           A  G++HT++VT  G   A G NK  Q G  +   I+  ++ + ++         ACG D
Sbjct: 129 AAVGKAHTLLVTASGRVYAAGENKVQQCGVKAGVDIKTFVQVTAIKG--QHAVDVACGLD 186

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
           F+  L+  E  ++   G PQYGQLG G D+ Y +  S  ++ Y+ Q  P+ I  L  + I
Sbjct: 187 FS--LAITEDGTLFAWGSPQYGQLGDGKDHSYISGTS--RMIYDPQ-MPKPITKLEDKKI 241

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQ-RNNVLPPEA 288
           V +ACGTNH++A+D +G VY+WG GGYGRLG  +   KD +VP  V  F+ RNN++    
Sbjct: 242 VAIACGTNHSLALDDQGAVYSWGCGGYGRLGLPDSPPKDIFVPTEVPGFKDRNNMV---K 298

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHH 343
            I+ G+ +     G   LY+WGK K +GD      W+YPK    LSGW +  + +G    
Sbjct: 299 KIACGTTSCMAIDGRNALYLWGKWKQSGDGGQGTPWLYPKHYPGLSGWEVWEISAGGSTL 358

Query: 344 FVGADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           F  A  S +SWG +A +GELG+GP   +S      V  +EG+    V+CG G +L++ D+
Sbjct: 359 FALAGESTVSWGQNAYHGELGHGPNAPRSCVNADIVKGMEGISCKKVSCGLGFTLMVADK 418

Query: 403 TN 404
           ++
Sbjct: 419 SS 420


>gi|426328132|ref|XP_004024855.1| PREDICTED: protein RCC2, partial [Gorilla gorilla gorilla]
          Length = 661

 Score =  221 bits (563), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 138/370 (37%), Positives = 197/370 (53%), Gaps = 39/370 (10%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTW---------GRNERGQLGHGDKIQRDRPTIVS 105
           G ++R  AAG +          GR   W         GRNE+GQLGHGD  + + P ++ 
Sbjct: 281 GKEVRGAAAGAIPVG----RGPGRSLLWILAVVGNLEGRNEKGQLGHGDTKRVEAPRLIE 336

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EV 163
            LS   I  A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +
Sbjct: 337 GLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPI 395

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           T  ACGA+F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +
Sbjct: 396 TKMACGAEFSMIMDCK--GNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRV 451

Query: 224 AALAGET------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
           A    +T            +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE V
Sbjct: 452 AIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMV 511

Query: 272 PRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
           PR V +F      P      I AG   S   +  G L+ WG    + +  MYPK + DL 
Sbjct: 512 PRLVKLFD----FPGRGASQIYAGYTCSFAVSEVGGLFFWGATNTSRESTMYPKAVQDLC 567

Query: 330 GWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
           GW +R +  G     V AD S ISWG +  +GEL    +  KSS   ++V  L+G+    
Sbjct: 568 GWRIRSLACGKSSIIVAADESTISWGPSPTFGELVSRDHKPKSSTAAQEVKTLDGIFSEK 627

Query: 389 VACGYGHSLV 398
           V  GY HSLV
Sbjct: 628 VTMGYSHSLV 637


>gi|428163470|gb|EKX32539.1| hypothetical protein GUITHDRAFT_121290 [Guillardia theta CCMP2712]
          Length = 453

 Score =  214 bits (545), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/417 (32%), Positives = 202/417 (48%), Gaps = 42/417 (10%)

Query: 22  LLFCGSTCWDAVGR--RKGALDG--NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           LL  G T W+  GR  +KG      NL  PT   P + +    +  G  S HC+A+  +G
Sbjct: 3   LLLAGCTSWEQSGRNPKKGETPSGENLNVPTVFAPALKLKFDSIFTGPSSTHCIALTSDG 62

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            CY++GRNE GQLG GDK  R  PT++  L    +     G++HT+ + + G     G N
Sbjct: 63  SCYSFGRNETGQLGQGDKSNRSSPTLIKALENETVVNIAVGKTHTIFLGDAGQVWCCGTN 122

Query: 138 KHGQLGSGSIRN-EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K G+ G G     E +P PV    S++     GA+F++ ++  E   + + G P+YG LG
Sbjct: 123 KFGECGIGRTSEVEDKPKPVN-FGSKIVHAGAGAEFSIAVN--EEGKVFSFGHPEYGALG 179

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAI---------------AALAGETIVKVACGTNHT 241
           HGTD  +    ++ +  +     P  I               A +    I +V CG  HT
Sbjct: 180 HGTDGRFII--ATGRQGFREVSTPTQITQWHLSDSKGKEFLGAIVEPPVIQRVYCGNKHT 237

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +AV   G ++ WG+ GYGRLG  +  D   P +V+ FQ  + +    ++ AG  +S    
Sbjct: 238 LAVGDDGSLWAWGYNGYGRLGLNDPHDRKRPCKVEFFQGPHAIKNPDLVVAGGASSGAVD 297

Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS----------- 350
           G GQLY WG++K  G+  + P    +L GW +R +  GN    +  D +           
Sbjct: 298 GIGQLYTWGQIKKVGESQVRPHAEHNLGGWRVRSLSFGNESFAISCDGNKEPRRPWVEGC 357

Query: 351 -----CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 I+WG ++YGELGYG   +KSSA P  V  L G  V  VA G GH+  ++D+
Sbjct: 358 ESIPHVITWGTSKYGELGYG-GSKKSSANPDIVSSLTGFTVKKVAAGVGHTCFLLDK 413


>gi|270007881|gb|EFA04329.1| hypothetical protein TcasGA2_TC014623 [Tribolium castaneum]
          Length = 430

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/312 (38%), Positives = 173/312 (55%), Gaps = 17/312 (5%)

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATA 167
           K ++  +G   +H+V++TE+G +L FG NK GQLG      +  P+ V  L +  V   A
Sbjct: 113 KVRLAVSGCVATHSVLITEEGKALTFGRNKFGQLGLEHTETKEIPTVVPALENMNVIGAA 172

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----- 222
           CG + T++L+   G  + + GLP+YGQLGH TD +Y   ++ +   +E  P+        
Sbjct: 173 CGRNHTLFLTDTGG--LHSFGLPEYGQLGHNTDGKYFKTNTKLCFNFETSPKRIVLYIEK 230

Query: 223 -----IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
                +A +    IV  +CG NHTVA+DSK   ++WGFGG+GRLGH E +DE VPR +  
Sbjct: 231 SKDGHVAPVDVTEIVDFSCGQNHTVAIDSKKRAFSWGFGGFGRLGHAEPRDELVPRLIKY 290

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
           F   +       I  GS  S      G L+M+G+ K  G+  MYPKP+ DLSGW +  + 
Sbjct: 291 FDTQS--KGLRSIHCGSTYSLAVTEFGALFMFGQTKRTGEANMYPKPIQDLSGWTINHVA 348

Query: 338 SGNMHHFVGADSSCISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +GN    V AD S ISWG    +GELG G    KSS  PK+V  L G+ V+ ++ G+GH+
Sbjct: 349 AGNTSIIVSADESVISWGSTPTFGELGLGEI-TKSSTTPKEVTKLTGVKVLGLSMGFGHT 407

Query: 397 LVIVDRTNVGER 408
           L+I       E+
Sbjct: 408 LLIAQNETPEEK 419


>gi|449670564|ref|XP_004207295.1| PREDICTED: protein RCC2-like [Hydra magnipapillata]
          Length = 481

 Score =  203 bits (516), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/376 (34%), Positives = 190/376 (50%), Gaps = 30/376 (7%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R + L G+ I  V++G VS    AV  EGR Y+ G N +GQLGH D   R  P ++ 
Sbjct: 61  SPHRYQTLDGIKIHTVSSGSVSYFFYAVSDEGRVYSCGLNAKGQLGHDDLKNRRNPCLIE 120

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVT 164
            L  ++I+    GR H + +T++G   + G NK+GQ G G+ +  +  P+P+      + 
Sbjct: 121 SLKDHQIETVATGRQHGLFLTKEGIVFSCGDNKNGQCGIGNKKEVVTVPTPINYTGPPIV 180

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE--------YNTKDSSVKLA--Y 214
             ACG +F++ L+  E   + + GLP+YGQLG G++N+        ++ + S V L    
Sbjct: 181 QIACGGEFSLILN--EDGVVFSFGLPEYGQLGLGSENKEISARKEVFHCEYSPVPLTSFV 238

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           E  P       L    I K+ACG NH  A+D K  ++TWGFGGYGRLGH + K+E VPR 
Sbjct: 239 EIDPDEGGTIFLGKPKITKIACGVNHCCAIDDKQRLFTWGFGGYGRLGHNDTKNELVPRL 298

Query: 275 VDVFQR---------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
           +  + R          NV   +      ++   C        ++G+   N +  MYPK +
Sbjct: 299 MKCWYRITGRADGGITNVFCGQQFTIVQTIVPKCA------LLFGQQATNKEANMYPKFI 352

Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
            DL+GW+++ +      + V AD   I S     YG L  GP   KSSA PK +  L+ +
Sbjct: 353 DDLNGWDVKHISCNQSGYIVCADDKVIASQPSPCYGTLAMGP-TVKSSAAPKIITTLKDV 411

Query: 385 HVISVACGYGHSLVIV 400
                  GY HSL +V
Sbjct: 412 VCFQTGVGYMHSLYLV 427


>gi|151556979|gb|AAI49505.1| RCC2 protein [Bos taurus]
 gi|296489973|tpg|DAA32086.1| TPA: regulator of chromosome condensation 2 [Bos taurus]
          Length = 402

 Score =  201 bits (511), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/300 (38%), Positives = 173/300 (57%), Gaps = 27/300 (9%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 83  ITEPEHTKERVKLEGSKCKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 142

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P +V  LS   I
Sbjct: 143 LSGVRVRTVVSGSCAAHSLLITTEGKLWSWGRNEKGQLGHGDTKRVEAPRLVEGLSHEVI 202

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 203 VSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDAV-PSPAQIMYNGQPITKMACGA 261

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 262 EFSMIMDCK--GNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 317

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR V +F
Sbjct: 318 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLF 377



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 95/251 (37%), Gaps = 54/251 (21%)

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           V  V + +C A     L + EG  + + G  + GQLGHG                     
Sbjct: 148 VRTVVSGSCAAH--SLLITTEG-KLWSWGRNEKGQLGHGDTKRVEA-------------- 190

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR +  L+ E IV  ACG NHT+A+   G V+ +G    G+LG   Q D  VP    +  
Sbjct: 191 PRLVEGLSHEVIVSAACGRNHTLALTETGSVFAFGENKMGQLGLGNQTDA-VPSPAQIMY 249

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
               +   A  +  S+   C    G LY +G                        C + G
Sbjct: 250 NGQPITKMACGAEFSMIMDCK---GNLYSFG------------------------CPEYG 282

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV---DILEGMHVI--SVACGYG 394
            + H   +D   I+   AQ  E       ++ +   +K     IL   +V+   VACG  
Sbjct: 283 QLGH--NSDGKFIA--RAQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGAN 338

Query: 395 HSLVIVDRTNV 405
           H+LV+  +  V
Sbjct: 339 HTLVLDSQKRV 349


>gi|391337262|ref|XP_003742989.1| PREDICTED: protein RCC2 homolog [Metaseiulus occidentalis]
          Length = 486

 Score =  200 bits (508), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 142/416 (34%), Positives = 204/416 (49%), Gaps = 32/416 (7%)

Query: 10  VEEETGKEKG--GELLFCGSTCWDAVGR---RKGALDGN-LVSPTRLRPLVGVDIRFVAA 63
            E+E  K  G  G L+  G   WD+ G+    K ++  N L SP R  P     +  V  
Sbjct: 59  TEDELQKHLGEPGRLILAGCVSWDSTGKSSKNKISMPFNCLWSPMRFGPCADKKVCKVIT 118

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           G  SCH V +  EG+ + +GRN  GQLG  D   R+ P IV  L +  +  A  G++HT+
Sbjct: 119 GRQSCHTVLITNEGKAWVFGRNTNGQLGTCDTKARNIPVIVDTLKESTVINAAMGKNHTL 178

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
            +T +G     G NK GQ+G G  + N + P+ +     +V    CG +F++ + S    
Sbjct: 179 FLTINGTVFGCGENKCGQVGVGHTQPNILVPTRINMKGRKVVKLDCGNEFSMMVDS--NG 236

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIV 232
            +   G P+YGQLG+ TD +Y    S +   Y   P+   +            +   ++V
Sbjct: 237 QLFGCGSPEYGQLGNNTDGQYFITSSKLAFNYVTSPKRVPLFVEKDKDNRATPIHDVSVV 296

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            ++CG NHT  +DS   V+TWGFGGYGRLGH  Q DE VPR +  F+      P+   + 
Sbjct: 297 DLSCGINHTAVIDSNRRVFTWGFGGYGRLGHASQADEKVPRLLRGFE-----GPQKGAAR 351

Query: 293 GSVNSSCTAGGGQ---LYMWGKLKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
                SCT        LYM GK+      +  MYP+ + DLSGW +  M        + A
Sbjct: 352 IWCGGSCTFVLNHLNILYMAGKIHTGASREANMYPQVVQDLSGWTVTDMSVSCHAVAIAA 411

Query: 348 DSSCISWGHAQ-YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH-SLVIVD 401
           D++ +  G  + YGEL  G  G+KSSA    V  LEG+ V  VA G GH +L+ +D
Sbjct: 412 DNNLVVQGGGKTYGELALGE-GRKSSANYDTVKTLEGIKVKQVATGLGHLALLAID 466


>gi|327290825|ref|XP_003230122.1| PREDICTED: protein RCC2-like, partial [Anolis carolinensis]
          Length = 500

 Score =  199 bits (505), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/453 (31%), Positives = 205/453 (45%), Gaps = 66/453 (14%)

Query: 3   ELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRPLV 54
           E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   L 
Sbjct: 34  EPEHSKERIKLEGSKFKGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGCLS 93

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG--------------QL-------GHG 93
           GV +R V +G  + H + +  EG+ ++W  +++               QL        HG
Sbjct: 94  GVQVRTVVSGPCAAHSLLITTEGKLWSWASSKKDVPSSVASSRRSSPIQLVQRLRSSSHG 153

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVV---------VTEDGNSLAFGWNKHGQLGS 144
                D     +   +  IK      S               E G  +     +  +   
Sbjct: 154 QSSDADAQVSPNRSVRTVIKVPQPAPSRPQARQELFPPAQTPERGRQM----TRLARAVQ 209

Query: 145 GSIRNEIEPSPVRCLV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
            S   +I P P   L        +T  ACGA+F++ +      ++ + G P+YGQLGH +
Sbjct: 210 ASTSKDIRPQPAAALEIMYNGQPITKVACGAEFSMVMDC--KGNLYSFGCPEYGQLGHNS 267

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAI----------AALAGETIVKVACGTNHTVAVDSKGY 249
           D ++  +   ++   E  PR  AI            +    +  VACG NHT+ +DS+  
Sbjct: 268 DGKFIARAQRIEFDCELVPRRVAIFIEKTKDGQILPVPNVVVRAVACGANHTLVLDSQKR 327

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE--AVISAGSVNSSCTAGGGQLY 307
           V++WGFGGYGRLGH EQ+DE VPR V +F      P    A I AG   S   +  G L+
Sbjct: 328 VFSWGFGGYGRLGHAEQRDEMVPRLVKLFD----FPGRGAAQIYAGYTCSFAISETGGLF 383

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGYGP 366
            WG    + D  MYPK + DL GW +R +  G     V AD S ISWG +  +GELGYG 
Sbjct: 384 FWGATNTSRDSTMYPKTVQDLCGWKIRSLACGKSSIIVAADESTISWGPSPTFGELGYGD 443

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +  KSS   ++V  L+G++V  VA GY HSL I
Sbjct: 444 HKPKSSTSAQEVKTLDGIYVEQVAMGYSHSLAI 476


>gi|443714898|gb|ELU07096.1| hypothetical protein CAPTEDRAFT_168471 [Capitella teleta]
          Length = 293

 Score =  198 bits (503), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/290 (40%), Positives = 167/290 (57%), Gaps = 24/290 (8%)

Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQLG G +++   PSP +   S   +   +CG +F++ +  + G ++ + G P+YGQLGH
Sbjct: 2   GQLGLG-LQSPYVPSPSKIKFSGAPIKRISCGGEFSM-IVDMRG-NLFSFGHPEYGQLGH 58

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIA------------ALAGETIVKVACGTNHTVAVD 245
             D +Y    +S KL Y  +  PR +A            A+    IV VACG NH+VA+D
Sbjct: 59  NNDGKYFV--TSNKLTYNCEVAPRKVAVFVEKARDGHVSAINDVEIVDVACGANHSVAID 116

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
            K  +YTWGFGGYGRLGH EQKDE VPR V VF+   +      I+AGS         G 
Sbjct: 117 QKKRLYTWGFGGYGRLGHAEQKDELVPRVVKVFE--GIRRGAVEIAAGSSFCLAVNECGG 174

Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGELGY 364
           L+ WG+ K  G+  MYPKP+MDL+GW +R +   N    V AD S ISWG +  YGELGY
Sbjct: 175 LFFWGQNKPTGEATMYPKPVMDLNGWKIRSIGCCNRSIVVAADDSVISWGSSPTYGELGY 234

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV--DRTNVGERLDQV 412
           G    KSS  P+++ +L+G+ +  ++CGY H++++   D      RL+++
Sbjct: 235 GDSKSKSSTTPQEMKLLDGVFIQKISCGYAHTILLARCDSDEEKTRLEKL 284



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 82/191 (42%), Gaps = 23/191 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK--IKK 114
           D+  V   C + H VA+D + R YTWG    G+LGH ++     P +V      +    +
Sbjct: 99  DVEIVDVACGANHSVAIDQKKRLYTWGFGGYGRLGHAEQKDELVPRVVKVFEGIRRGAVE 158

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
             AG S  + V E G    F W ++   G  ++     P PV  L   ++ +  C     
Sbjct: 159 IAAGSSFCLAVNECGG--LFFWGQNKPTGEATMY----PKPVMDLNGWKIRSIGCCNRSI 212

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           V   + + + I     P YG+LG+G        DS  K    +   P+ +  L G  I K
Sbjct: 213 V--VAADDSVISWGSSPTYGELGYG--------DSKSK----SSTTPQEMKLLDGVFIQK 258

Query: 234 VACGTNHTVAV 244
           ++CG  HT+ +
Sbjct: 259 ISCGYAHTILL 269



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 54/252 (21%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---------- 95
           SP++++   G  I+ ++  C     + VD+ G  +++G  E GQLGH +           
Sbjct: 15  SPSKIK-FSGAPIKRIS--CGGEFSMIVDMRGNLFSFGHPEYGQLGHNNDGKYFVTSNKL 71

Query: 96  --------------IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
                         +++ R   VS ++  +I     G +H+V + +      +G+  +G+
Sbjct: 72  TYNCEVAPRKVAVFVEKARDGHVSAINDVEIVDVACGANHSVAIDQKKRLYTWGFGGYGR 131

Query: 142 LGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           LG    ++E+ P  V+    +       A G+ F + ++          GL  +GQ    
Sbjct: 132 LGHAEQKDELVPRVVKVFEGIRRGAVEIAAGSSFCLAVNEC-------GGLFFWGQ---- 180

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG-G 257
                       K   EA   P+ +  L G  I  + C  N ++ V +   V +WG    
Sbjct: 181 -----------NKPTGEATMYPKPVMDLNGWKIRSIGC-CNRSIVVAADDSVISWGSSPT 228

Query: 258 YGRLGHREQKDE 269
           YG LG+ + K +
Sbjct: 229 YGELGYGDSKSK 240


>gi|60099075|emb|CAH65368.1| hypothetical protein RCJMB04_23b17 [Gallus gallus]
          Length = 385

 Score =  194 bits (492), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 112/295 (37%), Positives = 169/295 (57%), Gaps = 27/295 (9%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGA--------LDGNLVSPTRLRP 52
           + E E  K   +  G +  G+LL  G+T WD +GR++          L  NL  P R   
Sbjct: 92  ICEPEHSKERIKLEGSKCRGQLLIFGATNWDLIGRKEVPKQQAAYRNLGQNLWGPHRYGC 151

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV +R V +G  + H + +  EG+ ++WGRNE+GQLGHGD  + + P ++  L    I
Sbjct: 152 LSGVQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEVLGSEAI 211

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGA 170
             A  GR+HT+ +TE G+  AFG NK GQLG G+  + + PSP + + +   +T  ACGA
Sbjct: 212 VLAACGRNHTLALTETGSVYAFGENKMGQLGLGNQTDAV-PSPTQIMYNGQPITKMACGA 270

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F++ +      ++ + G P+YGQLGH +D ++  +  + ++ Y+ +  PR +A    +T
Sbjct: 271 EFSMIMDCK--GNLYSFGCPEYGQLGHNSDGKFIAR--AQRIEYDCELVPRRVAIFIEKT 326

Query: 231 ------------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                       +  VACG NHT+ +DS+  V++WGFGGYGRLGH EQKDE VPR
Sbjct: 327 KDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPR 381



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 88/221 (39%), Gaps = 43/221 (19%)

Query: 220 PRAIAALAGETIVKVACG--TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P     L+G  +  V  G    H++ + ++G +++WG    G+LGH + K    P+ ++V
Sbjct: 146 PHRYGCLSGVQVRSVVSGPCAAHSLLITAEGKLWSWGRNEKGQLGHGDTKRVEAPKLIEV 205

Query: 278 F----------QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
                       RN+ L   A+   GSV +      GQL     L N  D    P  +M 
Sbjct: 206 LGSEAIVLAACGRNHTL---ALTETGSVYAFGENKMGQL----GLGNQTDAVPSPTQIM- 257

Query: 328 LSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQ----------KSSAMPK 376
            +G  +  M  G      +    +  S+G  +YG+LG+   G+              +P+
Sbjct: 258 YNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 317

Query: 377 KVDIL------------EGMHVISVACGYGHSLVIVDRTNV 405
           +V I               + V  VACG  H+LV+  +  V
Sbjct: 318 RVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRV 358


>gi|194693980|gb|ACF81074.1| unknown [Zea mays]
          Length = 229

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 84/107 (78%), Positives = 93/107 (86%)

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPY 367
           MWGK+KN GDDWMYPKP+MDLSGWN+RCM SGNMHH VGAD SCISWG AQ GELGYGP 
Sbjct: 1   MWGKMKNTGDDWMYPKPVMDLSGWNIRCMASGNMHHIVGADDSCISWGVAQNGELGYGPN 60

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVIL 414
           GQKSSA PKKVDILEGMHV SV CG+G SL++VDR NVG+RL Q+ +
Sbjct: 61  GQKSSANPKKVDILEGMHVTSVGCGFGLSLIVVDRANVGDRLGQLEI 107


>gi|344242881|gb|EGV98984.1| Protein RCC2 [Cricetulus griseus]
          Length = 292

 Score =  182 bits (462), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 26/286 (9%)

Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++ + G P+YGQLGH
Sbjct: 2   GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGCPEYGQLGH 58

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
            +D ++  +  + ++ Y+ +  PR +A    +T             + VACG NHT+ +D
Sbjct: 59  NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVFLHVACGANHTLVLD 116

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
           S+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I AG   S   +  
Sbjct: 117 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCSFAVSEV 172

Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
           G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG +  +GEL
Sbjct: 173 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 232

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
           GYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 233 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 278



 Score = 39.7 bits (91), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 23/191 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--ELSKYKIKK 114
           ++ F+   C + H + +D + R ++WG    G+LGH ++     P +V   +       +
Sbjct: 99  NVVFLHVACGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGATQ 158

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
             AG + +  V+E G    +G        + S  + + P  V+ L    + + ACG   +
Sbjct: 159 IYAGYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQDLCGWRIRSLACGK--S 210

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             + + + ++I     P +G+LG+G        D   K +  AQ     +  L G    +
Sbjct: 211 SIIVAADESTISWGPSPTFGELGYG--------DHKPKSSTAAQ----EVKTLDGIFSEQ 258

Query: 234 VACGTNHTVAV 244
           VA G +H++ +
Sbjct: 259 VAMGYSHSLVI 269


>gi|149024444|gb|EDL80941.1| regulator of chromosome condensation 2 (predicted), isoform CRA_b
           [Rattus norvegicus]
 gi|149024445|gb|EDL80942.1| regulator of chromosome condensation 2 (predicted), isoform CRA_b
           [Rattus norvegicus]
          Length = 292

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 26/286 (9%)

Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++ + G P+YGQLGH
Sbjct: 2   GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGCPEYGQLGH 58

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
            +D ++  +  + ++ Y+ +  PR +A    +T            +  VACG NHT+ +D
Sbjct: 59  NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 116

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
           S+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I AG   S   +  
Sbjct: 117 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCSFAVSEV 172

Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
           G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG +  +GEL
Sbjct: 173 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 232

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
           GYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 233 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 278



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 25/199 (12%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--E 106
           ++ P+  V +R VA  C + H + +D + R ++WG    G+LGH ++     P +V   +
Sbjct: 93  QILPVPNVVVRDVA--CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 150

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
                  +  AG + +  V+E G    +G        + S  + + P  V+ L    + +
Sbjct: 151 FPGRGATQIYAGYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQDLCGWRIRS 204

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG   +  + + + ++I     P +G+LG+G        D   K +  AQ     +  
Sbjct: 205 LACGK--SSIIVAADESTISWGPSPTFGELGYG--------DHKPKSSTAAQ----EVKT 250

Query: 226 LAGETIVKVACGTNHTVAV 244
           L G    +VA G +H++ +
Sbjct: 251 LDGIFSEQVAMGYSHSLVI 269


>gi|149024443|gb|EDL80940.1| regulator of chromosome condensation 2 (predicted), isoform CRA_a
           [Rattus norvegicus]
          Length = 296

 Score =  181 bits (460), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 157/286 (54%), Gaps = 26/286 (9%)

Query: 140 GQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQLG G+  + + PSP + + +   +T  ACGA+F++ +      ++ + G P+YGQLGH
Sbjct: 2   GQLGLGNQTDAV-PSPAQIMYNGQPITKMACGAEFSMLMDC--KGNLYSFGCPEYGQLGH 58

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACGTNHTVAVD 245
            +D ++  +  + ++ Y+ +  PR +A    +T            +  VACG NHT+ +D
Sbjct: 59  NSDGKFIAR--AQRIEYDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLD 116

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
           S+  V++WGFGGYGRLGH EQKDE VPR V +F      P      I AG   S   +  
Sbjct: 117 SQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD----FPGRGATQIYAGYTCSFAVSEV 172

Query: 304 GQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA-QYGEL 362
           G L+ WG    + +  MYPK + DL GW +R +  G     V AD S ISWG +  +GEL
Sbjct: 173 GGLFFWGATNTSRESTMYPKAVQDLCGWRIRSLACGKSSIIVAADESTISWGPSPTFGEL 232

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
           GYG +  KSS   ++V  L+G+    VA GY HSLVI    +  E+
Sbjct: 233 GYGDHKPKSSTAAQEVKTLDGIFSEQVAMGYSHSLVIARDESEAEK 278



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 88/199 (44%), Gaps = 25/199 (12%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--E 106
           ++ P+  V +R VA  C + H + +D + R ++WG    G+LGH ++     P +V   +
Sbjct: 93  QILPVPNVVVRDVA--CGANHTLVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLVKLFD 150

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
                  +  AG + +  V+E G    +G        + S  + + P  V+ L    + +
Sbjct: 151 FPGRGATQIYAGYTCSFAVSEVGGLFFWGAT------NTSRESTMYPKAVQDLCGWRIRS 204

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG   +  + + + ++I     P +G+LG+G        D   K +  AQ     +  
Sbjct: 205 LACGK--SSIIVAADESTISWGPSPTFGELGYG--------DHKPKSSTAAQ----EVKT 250

Query: 226 LAGETIVKVACGTNHTVAV 244
           L G    +VA G +H++ +
Sbjct: 251 LDGIFSEQVAMGYSHSLVI 269


>gi|224012154|ref|XP_002294730.1| rcc1-repeat-containing protein [Thalassiosira pseudonana CCMP1335]
 gi|220969750|gb|EED88090.1| rcc1-repeat-containing protein [Thalassiosira pseudonana CCMP1335]
          Length = 377

 Score =  177 bits (449), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 128/366 (34%), Positives = 178/366 (48%), Gaps = 30/366 (8%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---IQRDRPTIVSELSKYKIKKAGA 117
           V  GC +CH V +  +G  Y WGRNE  QLG G     I       +      K   AG 
Sbjct: 1   VFTGCSACHSVVITEDGEAYGWGRNETSQLGLGPPSPLIATPTKLTIPNEESLKFVSAGV 60

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-CGADFTVWL 176
           G+ HT++V E+GN+ A G NK GQLG  S     E      +V +V   A CG + +  +
Sbjct: 61  GKYHTILVAENGNAYAAGGNKCGQLGVNSSVEVCERFRKCSVVGQVIVQASCGENISALI 120

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI--------AALAG 228
           SS     +   G  ++GQLG+G   EY      +  A  ++   R++        A   G
Sbjct: 121 SST--GQLYTTGSSEFGQLGNGETGEYIISAGKLGFANCSKFIRRSVFVQSEGDAAIEKG 178

Query: 229 ETIV--KVACGTNHTVAVDSKGY------VYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + I    VACG NH +A++++        V+TWG G YG LGH  Q DE+ PR V V  R
Sbjct: 179 DCICIGSVACGRNHLIAIEAQSTSGEVPRVFTWGCGDYGCLGHAVQADEYTPRLVGVM-R 237

Query: 281 NNVLPPEAVISAGSVNSSCT---AGGGQLYMWGKLKNNGDDWMYPKPLMDLS--GWNLRC 335
             +      ++A    S+CT      G +Y WGK +  G+  M P  +  L+  G N+  
Sbjct: 238 GPIFASNHPVAA-VAGSNCTLIRTKNGHVYYWGKHRQMGEATMRPTLVDALANNGHNVIA 296

Query: 336 MDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
              GN   F   A+   +SWG   YGELGYG   QKSSA PK V+ L+   V  +ACG+G
Sbjct: 297 FGVGNQTVFCSTANGVTVSWGAGAYGELGYGKGEQKSSAKPKFVNGLDSCLVTDLACGFG 356

Query: 395 HSLVIV 400
           H+L ++
Sbjct: 357 HTLFLI 362


>gi|358054870|dbj|GAA99083.1| hypothetical protein E5Q_05772 [Mixia osmundae IAM 14324]
          Length = 561

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 197/422 (46%), Gaps = 37/422 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G L+  G T W   GR+      ++ +P+ +R +  V  R +         VA+D+ G  
Sbjct: 26  GRLVVTGCTDWATAGRKAVQNSADVTTPSIVRSVAHVAFRRIFTSHSGATHVAIDINGTA 85

Query: 80  YTWGRNERGQLGHGDKIQRDRP------------TIVSELSKYKIKKAGAGRSHTVVVTE 127
           + WGRNE G LG         P            T+ S LS+  I  A  GR H ++VTE
Sbjct: 86  WLWGRNEHGALGTNAPDPVSGPVSLLNSSFYPANTLPSGLSQSPIVHAAIGRHHLLLVTE 145

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS------EVTATACGADFTVWLSSVEG 181
            G   A G N  GQ G   +++       + +V+      +    A G ++++ L++   
Sbjct: 146 AGEVYAAGANAMGQCGQDDLKDL---HAFKRVVAGGIGKEKAIQVAAGINYSLILTTT-- 200

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +   G  + G LG G   EY T      LA++ QP P  +  L G+ I++++ G  H 
Sbjct: 201 GRVYAFGSHEKGVLGSGKTGEYITGKG---LAFQEQPTPMPVRGLEGKDIIQISSGQQHN 257

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+DS GY+Y WG+   GR G   Q D  V + V  F + NVL   + I  G  NS    
Sbjct: 258 LALDSDGYLYAWGYSALGRTGMGNQVDLLVAKPVSQFAQTNVLMRASYICCGPQNSFVID 317

Query: 302 GGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS-----C 351
           G   LY++G+ K +GD      WM+P+P+ ++  +  R +  G    F  AD        
Sbjct: 318 GQRMLYLFGRWKTSGDGSSGQPWMHPRPVHEIQAYKQRLISLGGATLFAVADDEGTNNVT 377

Query: 352 ISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
           I WG +   GELG G   +KS+ +P +V+ L+G+ ++ +A G   +  +V   +  E L+
Sbjct: 378 IGWGQNCTNGELGLGVDQRKSATLPIRVETLDGLQILDLAAGQNTTYFLVRPPHALEVLE 437

Query: 411 QV 412
           ++
Sbjct: 438 KL 439


>gi|388855483|emb|CCF50929.1| uncharacterized protein [Ustilago hordei]
          Length = 546

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 201/446 (45%), Gaps = 61/446 (13%)

Query: 20  GELLFCGSTCWDAVGRRKGAL---------DGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           G +L  G   W  +GR+               +L +P  LR +  V ++ V +   SCH 
Sbjct: 10  GRVLVAGGIDWPTLGRKASKAGPPLTVNPDHPDLPAPHILRSVSNVRMKRVFSSHSSCHA 69

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQR----------------------DRPTIVSELS 108
           V + V+G  Y  GRNE+GQ G    IQR                      D    +   S
Sbjct: 70  VLLSVDGDAYIIGRNEQGQCGL--PIQRIPTSSKPSGPAVWDAYLLDPSTDFSPALPSGS 127

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEV 163
           K +I  A  GRSHT+++T  G+  + G N  GQ       +  I   IE +P       +
Sbjct: 128 KGQIVFAACGRSHTLLITSSGSVYSAGLNTSGQCAHPESQTVPIFTRIETAPFIKERDPI 187

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A +CG  F++ L++     +   G  + GQLG+G   E+ T  SS +LA+     P  +
Sbjct: 188 IAASCGLTFSMLLTA--SGKVYTMGSSEKGQLGNGRTGEHFT--SSNRLAFNTFSEPFLV 243

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             LA + I ++ACG  HT+A+D  GYVY WGFGGYGRLG   Q+D+  P  V  F R NV
Sbjct: 244 KQLADKKITQIACGQQHTIAMDEDGYVYVWGFGGYGRLGLGSQQDQLTPTLVPQFARENV 303

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDS 338
           +     I AG  NS+   G    ++ GK K +GD      +M  K L DL G  +     
Sbjct: 304 VMRAKAIYAGPTNSAVVDGQSMFWLAGKWKTSGDGSAGQGFMTFKYLPDLMGVKITNAAL 363

Query: 339 GNMHHFVGADSSC-----------ISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           G +     A               I WG +A  GELG G    +S+  P + + L+G+ +
Sbjct: 364 GGVTLLCTAIEEASVVGEHGATMNICWGQNANCGELGLGEGKPRSATKPLRNETLDGIAI 423

Query: 387 ISVACGYGHSLVIVDRTNVGERLDQV 412
           I +A G   +  +    N+GER  ++
Sbjct: 424 IDLAAGQNTTFYLA--RNLGERYGEL 447


>gi|390596949|gb|EIN06350.1| RCC1/BLIP-II [Punctularia strigosozonata HHB-11173 SS5]
          Length = 588

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 138/425 (32%), Positives = 206/425 (48%), Gaps = 41/425 (9%)

Query: 20  GELLFCGSTCWDAVGRRK--GALDGN-----LVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
           G++L CG T W  +GR+   G  +GN     L+ P  LR L  V +  V A C  CH +A
Sbjct: 46  GKVLICGGTDWPKLGRKDKGGKSEGNDDHPDLLEPHILRSLSNVHVVSVHASCAGCHFIA 105

Query: 73  VDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELS-----KYKIKKAGAGRSHTVVV 125
           +D EG  + +GRN+   LG    + +  + P  V+          K+  A  GR HT++V
Sbjct: 106 IDAEGNAWLFGRNQHSALGISKLEAVSENAPRKVTAAQLGAAEGTKLVWAACGRGHTILV 165

Query: 126 TEDGNSLAFGWNKHGQLGSG------SIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
             DGN+ + G N +GQ G        S RN    +PV+  V E     A G  F++ L++
Sbjct: 166 GSDGNAWSAGLNVNGQCGHAPCPEISSFRNI--KAPVKDDVKERFVKAAAGISFSLLLTA 223

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                +   G  ++GQLG+G   E+    S+ K A+E    P  +  L    IV V+CG 
Sbjct: 224 --SGRVYACGSGEHGQLGNGRTGEHIV--SAGKTAFEVVSEPLLVRGLDDRKIVDVSCGQ 279

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H+VA+DS+G VY WG+ GY RLG   Q+D  VP+ V  +   N +   + ISAG  ++ 
Sbjct: 280 QHSVALDSQGLVYVWGYNGYCRLGLGNQQDVMVPKVVPQYAGPNEITMGSAISAGPTSTV 339

Query: 299 CTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFV---GADSS 350
                G  +M GK KN GD      +   + + D+ G  +    SG + HF      D +
Sbjct: 340 VIDKQGMYWMAGKWKNTGDGSGGQPYSTFRYMQDIMGCKITHAASGGVTHFALCPEEDGT 399

Query: 351 CISWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
            ++  + Q    GELG G    KS+  P K   LEG+ V  +A G   +L +  R+N  E
Sbjct: 400 VMTIAYGQNAGNGELGLGSDQPKSATKPTKHVPLEGVDVFQIAAGQNTTLFLA-RSN--E 456

Query: 408 RLDQV 412
           +L ++
Sbjct: 457 KLSEL 461


>gi|343425648|emb|CBQ69182.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
          Length = 544

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/445 (30%), Positives = 208/445 (46%), Gaps = 59/445 (13%)

Query: 20  GELLFCGSTCWDAVGRRKGAL---------DGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           G +L  G   W  +GR+               +L +P  LR +  V ++ + +   SCH 
Sbjct: 10  GRVLVAGGIDWPTLGRKATKAGPPLTVNPDHPDLPAPHILRSVSNVRMKRIFSSHSSCHA 69

Query: 71  VAVDVEGRCYTWGRNERGQLGHG----------------DKIQRDRPTIVSEL----SKY 110
           V + V+G  Y  GRNE+GQ G                  D    D  T  S      +  
Sbjct: 70  VLLSVDGDAYIIGRNEQGQCGLPIRQIPASSKPSGPAVWDAYLLDPATDFSPALPAGASG 129

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVTA 165
           +I  A  GRSHT+++T  G+  + G N  GQ G     +  +   IE  P       V A
Sbjct: 130 QIVSAACGRSHTLLITAAGSVYSAGLNTSGQCGHPESQTVPLFTRIETGPFIKDRDPVVA 189

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            +CG  F++ L+  +   +   G  + GQLG+G   E+ T  +S +LA+     P  +  
Sbjct: 190 ASCGLTFSMLLT--QSGKVYTMGSSEKGQLGNGRTGEHFT--TSNRLAFNTFSDPFLVKQ 245

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           LA +TIV++ACG  HT+A+D +G+VY WGFGGYGRLG   Q+D+ VP  V  F R NV+ 
Sbjct: 246 LADKTIVQIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQDQLVPTLVPQFARENVVM 305

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMD----------LSG 330
               I AG  NS+   G    ++ GK K +GD      +M  K L D          L G
Sbjct: 306 RAKSIYAGPTNSAVVDGQSMFWLAGKWKTSGDGSAGQGFMTFKYLPDMMGVKVTNAGLGG 365

Query: 331 WNLRC--MDSGNMHHFVGADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
             L+C  ++  ++    GA  + I WG +A  GELG G    +S+  P + + L+G+ ++
Sbjct: 366 VTLQCTAIEEASLAGDHGATMN-ICWGQNANCGELGLGEGKPRSATKPLRCETLDGIAIL 424

Query: 388 SVACGYGHSLVIVDRTNVGERLDQV 412
            +A     +  +    N+GER  ++
Sbjct: 425 DIAAAQNTTFYLA--RNLGERYGEL 447


>gi|312382134|gb|EFR27690.1| hypothetical protein AND_05265 [Anopheles darlingi]
          Length = 464

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 130/412 (31%), Positives = 187/412 (45%), Gaps = 88/412 (21%)

Query: 7   EKMVEEETGK-EKG-GELLFCGSTCWDAVGRR--KGALDGNLVSPTRLRPLVGVDIRFVA 62
           EK+ EE  G  +KG G+LL  G   W+  G+R  KG         T++RP +    RF  
Sbjct: 60  EKLPEELLGAYDKGPGKLLIAGMVSWEMTGKRDSKGV--------TKIRPNLFSFHRFTG 111

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
                                     QLGHGD    ++PT V++L+ + + +A  GR+HT
Sbjct: 112 ETL----------------------SQLGHGDTTTYEKPTQVADLADFNVIQAACGRNHT 149

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVE 180
           + +T+ G     G NK GQ G G+    I  SP R   +   +    CGA+F+V L  ++
Sbjct: 150 LFLTDTGTVYECGDNKSGQCGVGNKTPTIT-SPTRISYNGPPIIKVGCGAEFSVIL-DIK 207

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA----------IAALAGET 230
           G ++   GLP+YGQLGH TD  Y    + +   +E QPR             +  +    
Sbjct: 208 G-NLHTFGLPEYGQLGHNTDGRYFVNSTKMSFHFELQPRKVLVYMEKNKEGHVLPIENVN 266

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           I+  ACG NHT             F    R   R                         +
Sbjct: 267 IIDFACGNNHTF------------FDTQNRKVMR-------------------------V 289

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
             GS  S      G LY++G+ K  G+  MYPKP+ DL+GWN+  + +G     + AD S
Sbjct: 290 FCGSSYSLAITDIGSLYLFGQNKKTGEANMYPKPVQDLAGWNITSIGTGYTSIVISADDS 349

Query: 351 CISWGHA-QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            I+WG +  YGELG G   QKSS+ PK+V  +EGM +  V  GY H+L++V+
Sbjct: 350 LIAWGASPTYGELGLGDL-QKSSSTPKEVTRMEGMKIPLVTLGYSHTLMLVN 400


>gi|392585986|gb|EIW75324.1| RCC1 BLIP-II [Coniophora puteana RWD-64-598 SS2]
          Length = 530

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 191/419 (45%), Gaps = 37/419 (8%)

Query: 15  GKEKGGELLFCGSTCWDAVGR--RKGALDG---------NLVSPTRLRPLVGVDIRFVAA 63
           G++  G +L CG T W  +GR  R G   G         +L+ P  LR L  V I  +  
Sbjct: 13  GEQTWGRVLICGGTDWPKLGRKDRGGKAAGGEDEDEAPPDLLEPHILRSLSNVKIASIHT 72

Query: 64  GCVSCHCVAVDVEGRCYTWGRN-ERGQLGHGDKI---QRDRPTIVSELSKYK---IKKAG 116
            C SCHC+A+D+ G  Y +GRN  +  LG   ++   Q+ R     EL   K      A 
Sbjct: 73  SCASCHCIALDIHGTAYMFGRNAPQTPLGVPQEVVSEQKPRKLTAPELGAGKGTRFVHAA 132

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-----EIEPSPVRCLVSEVTATACGAD 171
            GR H+++V  +G+  + G N  GQ G  +  N     +IE      +   V   A G  
Sbjct: 133 CGRYHSLLVDSEGDIWSAGANNVGQCGHETCSNIPGFRKIESPEAGGVKQRVIKAAAGIT 192

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
           F+V L+  E   +   G  + GQLG+G   E+    +      E  P P  +  L  + I
Sbjct: 193 FSVILT--ENGRVFTFGSGEKGQLGNGRTGEHIVTGNKTAFDIEVDPIP--VKGLNDKVI 248

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
             +ACG  H VA+D K  VY WG+ GY RLG   Q+D  VP+ V  F   N       I+
Sbjct: 249 TDIACGQQHAVAIDEKNVVYVWGYNGYCRLGLGNQQDVLVPKAVPQFAGPNESGTGKYIA 308

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
           AG  ++         +M GK KN+G+      +   +P+ DL G  +    SG + HF  
Sbjct: 309 AGPSSTIVVDQLQAFWMAGKWKNSGEGSSGSPYSSFRPIQDLMGIKVLHASSGGVTHFAL 368

Query: 347 ADSS----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           A        ++WG  A  GELG GP   KS++ P +   L G+ V+SVA G   + ++ 
Sbjct: 369 ATEEEGVMTVAWGQGASNGELGLGPEEPKSTSKPTRHMPLSGIDVLSVAAGQNTTYILA 427


>gi|323450873|gb|EGB06752.1| hypothetical protein AURANDRAFT_71948 [Aureococcus anophagefferens]
          Length = 1603

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 200/414 (48%), Gaps = 34/414 (8%)

Query: 22  LLFCGSTCW---------DAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCV 71
           L+ CGST W             ++ GA      SP  +   L GV + +V+ G  + H +
Sbjct: 44  LVLCGSTDWVAAAKGAAGKQKQKQDGAQGDQFDSPVVVGGALAGVRVSYVSVGPSAGHVL 103

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQ--RDRPTIVSELSKYKIK-KAGAGRSHTVVVTED 128
           A   +G+ + WG+N  GQLG G K       PT     S       A  G++HT+V+  D
Sbjct: 104 AFG-DGKVFAWGQNSHGQLGLGAKAAWCVPGPTEAKAWSAPGTPVSAACGKNHTLVLYAD 162

Query: 129 GNSLAFGWNKHGQLGSGSIRNEI-----EPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           G   + G  + G LG G    ++     +P  V   VS+    A G DF+  L+      
Sbjct: 163 GAVASAGCGERGALGHGDKAKDMPEMSHDPRVVEA-VSDAVCIAAGTDFS--LAGASTGK 219

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVACGTNHTV 242
           + + G  ++G+LG G D  YNTKDSS+KL Y A   P  +  L AG   V+V+ G NH  
Sbjct: 220 VYSWGWTEFGKLGQGDDGCYNTKDSSIKLTYTAAGAPGLVKGLPAGFEPVQVSAGKNHAA 279

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA------GSVN 296
           A+ + G  +TWG G YG+LGHR Q+    PR ++  + +++L  ++  +           
Sbjct: 280 ALGADGVGFTWGDGAYGKLGHRSQEQLNAPRALEGARFSSLLCGDSSTAGLGWPEYRGRP 339

Query: 297 SSCTAGGGQLYMWGKLK-NNGDDWMYPKPLMDLSGWNL--RCMDSGNMHHFVGADSSCIS 353
            + TAG G L++WG LK  +G+   +P P  DL GW +   C+  G  H  +GA+ S ++
Sbjct: 340 FTKTAGDGMLFVWGVLKGTHGEGATHPVPNYDLQGWAIDKHCLGVGASHCALGAEGSAVA 399

Query: 354 WG--HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           W      YG+LGYG  G KSS   K++D L+G          G +  + D  +V
Sbjct: 400 WALMPVAYGQLGYGDAGPKSSHRAKELDALKGAVTAQCVASSGQTHFLCDAASV 453


>gi|449016556|dbj|BAM79958.1| similar to guanine nucleotide exchanging fractor [Cyanidioschyzon
           merolae strain 10D]
          Length = 532

 Score =  167 bits (423), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 144/466 (30%), Positives = 210/466 (45%), Gaps = 70/466 (15%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGR-RKGALD--GNLVSPTRLR----------PLVG 55
           MV    G + G ELLFCGS  WD  GR RKGA++    +++P RL           P   
Sbjct: 1   MVHPNAGAQ-GAELLFCGSCKWDTQGRDRKGAIEYGEEVLAPHRLTGSVTLGGLTTPADR 59

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI--VSELSKYKIK 113
             +  + +G V+ H V +  +GR    GRN  G+LG G   +R  P    V  +   +  
Sbjct: 60  AQMLRIVSGPVAAHAVLILTDGRALAIGRNTHGELGIGTA-RRFAPVFMPVVFIKGGRCT 118

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS---------IRNEIEPSPVRCLVSEVT 164
            A  GR+HT+ + +DG   A G N  GQLG G+         +   + P  +  L   + 
Sbjct: 119 GAACGRTHTLFLMDDGVVYATGANDAGQLGVGARGISASGANVPAAVTPIRLTYLAEHMG 178

Query: 165 ATA----CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             A    CG  F+V L+  +  S+   G  + G LG GT  E   K    ++  E++P P
Sbjct: 179 VRAAQVGCGEQFSVVLA--DDGSLYTFGTHRDGVLGLGTTGEVIGKQ---RMEVESEPLP 233

Query: 221 RAIAALA------------------GETI---VKVACGTNHTVAVDSKGYVYTWGFGGYG 259
           R +                       E I    +V CG  H VA+DS+  V++WGFGGYG
Sbjct: 234 RRVTRFVRSDGIVVALDESKSMDEQSEDIPRFTQVVCGQRHVVALDSRHRVWSWGFGGYG 293

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
           RLGHR   DE  PR ++ F+R        V + AG+         G +Y WG  K  G+ 
Sbjct: 294 RLGHRTPNDELRPRCMEFFERLRDDRRRCVKLYAGASCCYALTEMGTVYFWGITKMTGEA 353

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA-QYGELGYGP--YGQ----- 369
              P+ L DL GW +R +  G     +  +  + I+WG +  YGE+G+G    G+     
Sbjct: 354 TTSPQMLYDLHGWKIRDIAVGISSTMIACEECTTIAWGPSPAYGEMGFGETVVGRSFAGR 413

Query: 370 ----KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQ 411
               KSS  P+ VD L+G+ V  +A G   + +++    V    DQ
Sbjct: 414 TGVLKSSTQPRIVDPLKGVQVSQLAMGAFFTFLLLRPEEVQASDDQ 459


>gi|443897037|dbj|GAC74379.1| hypothetical protein PANT_11d00031 [Pseudozyma antarctica T-34]
          Length = 547

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 202/446 (45%), Gaps = 61/446 (13%)

Query: 20  GELLFCGSTCWDAVGRRKGALDG----------NLVSPTRLRPLVGVDIRFVAAGCVSCH 69
           G +L  G   W  +GR K   +G          +L +P  LR +  V ++ + +   SCH
Sbjct: 13  GRVLVTGGIDWPTLGR-KATKNGPPLSVNPDHPDLPAPHILRSVSNVRMKRIFSSHSSCH 71

Query: 70  CVAVDVEGRCYTWGRNERGQLGHG----------------DKIQRDRPTIVSEL----SK 109
            V + V+G  Y  GRNE GQ G                  D    D  T  S       K
Sbjct: 72  AVLLSVDGDVYIIGRNEHGQCGLPIRPVPGSSKPSGVAVWDAYMLDAATDFSPALPSGPK 131

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVT 164
             +  A  GRSHT+++T  G+  + G N  GQ G     +  +   IE          V 
Sbjct: 132 GHVVAAACGRSHTLLITAGGSVYSAGLNTSGQCGHPESQTVPLFTRIETGAFIKERDPVV 191

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A +CG  F++ L+  +   +   G  + GQLG+G   E+ T ++  +LA+     P  + 
Sbjct: 192 AASCGLTFSMLLT--QSGKLYTMGSSEKGQLGNGRTGEHFTSNN--RLAFNTFSEPFLVK 247

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            LA + I  +ACG  H++A+D +GYVY WGFGGYGRLG   Q+D+  P  V  F R NVL
Sbjct: 248 QLADKNITSIACGQQHSIALDDQGYVYVWGFGGYGRLGLGSQQDQLTPTLVPQFARENVL 307

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMD----------LS 329
                I AG  NS+   G    ++ GK K +GD      +M  K L D          L 
Sbjct: 308 MRAKSIYAGPTNSAVVDGQSMFWIAGKWKTSGDGSAGQGFMTFKYLPDMMGVKVTNSGLG 367

Query: 330 GWNLRC--MDSGNMHHFVGADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           G  L C  ++  ++    GA  + I WG +A  GELG G    +S+  P + + L+G+ +
Sbjct: 368 GVTLLCTAIEEASLQGEHGATMN-ICWGQNANCGELGLGEGKPRSATKPLRCETLDGIAI 426

Query: 387 ISVACGYGHSLVIVDRTNVGERLDQV 412
           + +A     +  +    N+GER  ++
Sbjct: 427 LDIAAAQNTTFYLAR--NMGERYGEL 450


>gi|71020563|ref|XP_760512.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
 gi|46100407|gb|EAK85640.1| hypothetical protein UM04365.1 [Ustilago maydis 521]
          Length = 548

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 136/444 (30%), Positives = 203/444 (45%), Gaps = 57/444 (12%)

Query: 20  GELLFCGSTCWDAVGRRK---------GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           G +L  G   W  +GR+               +L +P  LR +  V ++ V +   SCH 
Sbjct: 10  GRVLVAGGIDWPTLGRKATKSGPPLTVNPDHPDLPAPHILRSVSNVRMKRVFSSHSSCHA 69

Query: 71  VAVDVEGRCYTWGRNERGQLGHG----------------DKIQRDRPTIVSEL----SKY 110
           V + V+G  Y  GRNE+GQ G                  D    D  T  S      +  
Sbjct: 70  VLLSVDGNAYIIGRNEQGQCGLPIRPIPASSKPSGPAVWDAYLLDHATDFSPALPTGANG 129

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVTA 165
           +I  A  GRSHT+++T  G+  + G N  GQ G     +  I   IE +P       + A
Sbjct: 130 QIVYAACGRSHTLLLTASGSVYSAGLNTSGQCGHPESQTVPIFTRIETAPFIKERDAIVA 189

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            +CG  F++ L+  +   +   G  + GQLG+G   E+ T  SS +LA+     P  +  
Sbjct: 190 ASCGLTFSMLLT--QSGKVYTMGSSEKGQLGNGRTGEHFT--SSNRLAFNTFSEPFLVKQ 245

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           LA + IV +ACG  HT+A+D +G+VY WGFGGYGRLG   Q+D+ VP  V  F R NV+ 
Sbjct: 246 LADKKIVHIACGQQHTIALDDQGFVYVWGFGGYGRLGLGSQQDQLVPTLVPQFARENVVM 305

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGN 340
               I AG  NS+   G    ++ GK K +GD      +M  K L D+ G  +  +  G 
Sbjct: 306 RAKAIYAGPTNSAVVDGQSMFWLAGKWKTSGDGSAGQGFMTFKYLPDMMGVKVTNVGLGG 365

Query: 341 MHHFVGA-----------DSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
           +     A            +  I WG +A  GELG G    +S+  P + + L+G+ +I 
Sbjct: 366 VTLLCTAIEEPSLSGDHGATMNICWGQNANCGELGLGEGKPRSATKPLRCETLDGIAIID 425

Query: 389 VACGYGHSLVIVDRTNVGERLDQV 412
           +A     +  +    N+GER  ++
Sbjct: 426 IAAAQNTTFYLA--RNMGERYGEL 447


>gi|426196418|gb|EKV46346.1| hypothetical protein AGABI2DRAFT_193077, partial [Agaricus bisporus
           var. bisporus H97]
          Length = 530

 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 201/422 (47%), Gaps = 40/422 (9%)

Query: 14  TGKEKGGELLFCGSTCWDAVGR--RKGA--------LDGNLVSPTRLRPLVGVDIRFVAA 63
           TG+ + G +L CG T W  +GR  R G         L+ +L+ P  LR L  V +  V A
Sbjct: 15  TGQPQWGRVLICGGTDWPRLGRKDRPGTINPETGEPLNPDLLEPHILRSLSNVKVASVHA 74

Query: 64  GCVSCHCVAVDVEGRCYTWGRNER---GQLGHGDKIQRD------RPTIVSELSKYKIKK 114
            C  CH VA+D+EG  + +GRN     G  G G++   +      RPT +      K   
Sbjct: 75  SCAGCHFVAIDIEGNAWLFGRNGSSCLGTSGPGEEYISENAPRMVRPTDLGAQGDTKFVY 134

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP-VRCLVS----EVTATACG 169
           A  GR+HT++V  DG+    G N  GQ G  S+  E+     V+ + +     V   + G
Sbjct: 135 AACGRNHTLLVGSDGSVWTAGVNNLGQCGH-SLSPEVSAFKGVKVIYNGSKEHVVQASAG 193

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             F++ L+  +   +   G  + GQLG+GT  E  T  +  K A++ + +P  + AL G+
Sbjct: 194 ITFSLVLT--DAGRVFAFGSAEKGQLGNGTTGERITTGN--KTAFDVEEKPIYVKALDGK 249

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            IV++A G  H++A+D  G VY WG+ GY RLG   Q D   P+ V  F   +       
Sbjct: 250 NIVQIASGQQHSIALDDTGVVYVWGYNGYCRLGLGNQVDVLKPKPVPQFSGQSESALATT 309

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHF 344
           ++AG  NS      G  +M GK KN+G+      +   + + D+ G  +    SG + H+
Sbjct: 310 VAAGPTNSVVVDKQGLYHMAGKWKNSGEGSSGSPYSSFRFIQDIMGCKVSHPRSGGVTHW 369

Query: 345 V-----GADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
           +           + WG +A  GELG GP   KSS  P K + L  + ++ +A G   +L+
Sbjct: 370 LITPDDDGTPMTVCWGQNAANGELGLGPEEPKSSTKPTKNNPLAHIEILDIAAGQNTTLL 429

Query: 399 IV 400
           + 
Sbjct: 430 LA 431



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 96/272 (35%), Gaps = 82/272 (30%)

Query: 151 IEPSPVRCL----VSEVTATACGADF-------TVWLSSVEGASILNAGLPQYGQLGHGT 199
           +EP  +R L    V+ V A+  G  F         WL    G+S L            G 
Sbjct: 56  LEPHILRSLSNVKVASVHASCAGCHFVAIDIEGNAWLFGRNGSSCLGTS---------GP 106

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
             EY ++++   +      RP  + A      V  ACG NHT+ V S G V+T G    G
Sbjct: 107 GEEYISENAPRMV------RPTDLGAQGDTKFVYAACGRNHTLLVGSDGSVWTAGVNNLG 160

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
           + GH       +   V  F+         VI  GS      A  G  +            
Sbjct: 161 QCGHS------LSPEVSAFKG------VKVIYNGSKEHVVQASAGITF------------ 196

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------ 373
                       +L   D+G +  F          G A+ G+LG G  G++ +       
Sbjct: 197 ------------SLVLTDAGRVFAF----------GSAEKGQLGNGTTGERITTGNKTAF 234

Query: 374 ----MPKKVDILEGMHVISVACGYGHSLVIVD 401
                P  V  L+G +++ +A G  HS+ + D
Sbjct: 235 DVEEKPIYVKALDGKNIVQIASGQQHSIALDD 266


>gi|409081184|gb|EKM81543.1| hypothetical protein AGABI1DRAFT_111837 [Agaricus bisporus var.
           burnettii JB137-S8]
          Length = 537

 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 197/420 (46%), Gaps = 36/420 (8%)

Query: 14  TGKEKGGELLFCGSTCWDAVGR--RKGA--------LDGNLVSPTRLRPLVGVDIRFVAA 63
           TG+ + G +L CG T W  +GR  R G         L+ +L+ P  LR L  V +  V A
Sbjct: 15  TGQPQWGRVLICGGTDWPRLGRKDRPGTINPETGEPLNPDLLEPHILRSLSNVKVASVHA 74

Query: 64  GCVSCHCVAVDVEGRCYTWGRNER---GQLGHGDKIQRD------RPTIVSELSKYKIKK 114
            C  CH VA+D+EG  + +GRN     G  G G++   +      RPT +      K   
Sbjct: 75  SCAGCHFVAIDIEGNAWLFGRNGSSCLGTSGPGEEYISENAPRMVRPTDLGAQGDTKFVY 134

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP-VRCLV--SEVTATACGAD 171
           A  GR+HT++V  DG+    G N  GQ G  S+  E+     V+ +   S+       A 
Sbjct: 135 AACGRNHTLLVGSDGSVWTAGVNNLGQCGH-SLSPEVSAFKGVKVMYNGSKEYVVQASAG 193

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            T  L   +   +   G  + GQLG+GT  E  T  +  K A++ + +P  + AL G+ I
Sbjct: 194 ITFSLVLTDAGRVFAFGSAEKGQLGNGTTGERITTGN--KTAFDVEEKPIYVKALDGKNI 251

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           V++A G  H++A+D  G VY WG+ GY RLG   Q D   P+ V  F   +       ++
Sbjct: 252 VQIASGQQHSIALDDTGVVYVWGYNGYCRLGLGNQVDVLKPKPVPQFSGQSESALATTVA 311

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFV- 345
           AG  NS      G  +M GK KN+G+      +   + + D+ G  +    SG + H++ 
Sbjct: 312 AGPTNSVVVDKQGLYHMAGKWKNSGEGSSGSPYSSFRFIQDIMGCKVSHPRSGGVTHWLI 371

Query: 346 ----GADSSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                     + WG +A  GELG GP   KSS  P K + L  + ++ +A G   +L++ 
Sbjct: 372 TPDDDGTPMTVCWGQNAANGELGLGPEEPKSSTKPTKNNPLAHIEILDIAAGQNTTLLLA 431



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 96/272 (35%), Gaps = 82/272 (30%)

Query: 151 IEPSPVRCL----VSEVTATACGADF-------TVWLSSVEGASILNAGLPQYGQLGHGT 199
           +EP  +R L    V+ V A+  G  F         WL    G+S L            G 
Sbjct: 56  LEPHILRSLSNVKVASVHASCAGCHFVAIDIEGNAWLFGRNGSSCLGTS---------GP 106

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
             EY ++++   +      RP  + A      V  ACG NHT+ V S G V+T G    G
Sbjct: 107 GEEYISENAPRMV------RPTDLGAQGDTKFVYAACGRNHTLLVGSDGSVWTAGVNNLG 160

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
           + GH       +   V  F+   V+        GS      A  G  +            
Sbjct: 161 QCGHS------LSPEVSAFKGVKVM------YNGSKEYVVQASAGITF------------ 196

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------ 373
                       +L   D+G +  F          G A+ G+LG G  G++ +       
Sbjct: 197 ------------SLVLTDAGRVFAF----------GSAEKGQLGNGTTGERITTGNKTAF 234

Query: 374 ----MPKKVDILEGMHVISVACGYGHSLVIVD 401
                P  V  L+G +++ +A G  HS+ + D
Sbjct: 235 DVEEKPIYVKALDGKNIVQIASGQQHSIALDD 266


>gi|219130523|ref|XP_002185413.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217403127|gb|EEC43082.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 657

 Score =  164 bits (414), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 140/431 (32%), Positives = 204/431 (47%), Gaps = 63/431 (14%)

Query: 13  ETGKEKGGELLFCGSTCWDAVGRRKGALDG--NLVSPTRLRPLVGVDIRF--VAAGCVSC 68
           +  ++ G  LL  G+     VGR K       +L+ PTR    + +D +F  +   C + 
Sbjct: 214 QNTQQPGYTLLQAGTLDSTIVGRVKIKTPEPYHLMVPTR----IAMDRKFTKIFTSCNAV 269

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+D  G  Y WGRNE  QLG         PT + EL   K+  A  G+SHT++   D
Sbjct: 270 HSIAIDEAGVAYGWGRNESSQLGASLPNVVVLPTEL-ELPD-KVVGAALGKSHTILQLAD 327

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASIL 185
            +  A G NK GQ G   +  E+ P+  +C+V E   +   +CG DF+V L S EG  + 
Sbjct: 328 QSLWAVGANKAGQCGV-RVGTEVIPNFRKCVVPESVTIVQISCGEDFSVALDS-EG-YLY 384

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLA-------------------YEAQPRPRAIAAL 226
           + G  +YGQLG+G   EY    + +  A                   + +  + + +   
Sbjct: 385 STGSSEYGQLGNGETGEYFIAANKLGFANCNVFTKRSVFCHTPGENAHSSNAKDKVVPLA 444

Query: 227 AGETIVKVACGTNHTVAV----DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR-- 280
               I  +ACG +H VAV    D K  V++WG G YG LGH  Q DE+ PR +  F    
Sbjct: 445 EDVRIQSIACGKHHVVAVEAPSDQKPRVFSWGSGDYGCLGHGVQADEYFPRMIGGFINTP 504

Query: 281 --NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
             NN    + V++AG+  S      G +Y WGK +  G+  M P+ L+D+   N      
Sbjct: 505 LGNN---KDVVVTAGAHCSLIRTSNGHVYYWGKHRPVGEAVMRPQ-LVDVLANNQH---- 556

Query: 339 GNMHHF-VGADS--------SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++ HF  GA +          ++WG   +GELG G    KSSA P  V  L+G  V+ V
Sbjct: 557 -DVRHFAAGAQTVVCSTSLGQTVAWGQGPHGELGLG--TPKSSAKPSFVSALDGAQVMDV 613

Query: 390 ACGYGHSLVIV 400
            CGYGH+L +V
Sbjct: 614 VCGYGHTLYLV 624


>gi|389738107|gb|EIM79311.1| RCC1/BLIP-II [Stereum hirsutum FP-91666 SS1]
          Length = 602

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 190/413 (46%), Gaps = 40/413 (9%)

Query: 20  GELLFCGSTCWDAVGRR---KGALD--GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
           G LL  G T W  +G+R    G +    +L+ P  LR L  V I  V AGC  CH +A+D
Sbjct: 14  GRLLIAGGTDWPKLGKRLPNNGEISEHPDLLDPHILRSLSNVKIVSVHAGCAGCHVIALD 73

Query: 75  VEGRCYTWGRNERGQLGHG--DKIQRDRP-----TIVSELSKYKIKKAGAGRSHTVVVTE 127
           VEG+ + +GRN    LG    D I  + P       +   +  K   A  GR+H+++V  
Sbjct: 74  VEGQAWLFGRNTSSALGVSGVDVISENAPWKLRAQDLGAAAGTKFVHAACGRAHSILVGS 133

Query: 128 DGNSLAFGWNKHGQLGS------GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           DG     G N  GQ G        S R    P      +  V + A G  F++ L+  + 
Sbjct: 134 DGRVWTAGVNLLGQCGHHPCPEITSFRRVDGPYNSSGAIQPVVSAAAGITFSLLLT--KD 191

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +   G  + GQLG+G   EY    +  K A++ +  P  +  L  + IV++ACG  H+
Sbjct: 192 GQVYAMGSGEKGQLGNGRTGEYIATGN--KTAFDVESEPILVKGLTDKKIVQIACGQQHS 249

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+D  G VY WG+ GY RLG  +QKD  +P+ V  F     +   A+++AG  NS    
Sbjct: 250 IALDDTGVVYVWGYNGYCRLGLGDQKDVLIPKVVPQFAGPREMMMGAMVAAGPSNSVVVD 309

Query: 302 GGGQLYMWGKLKNNGD--------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--- 350
                +M GK K  GD         + Y + +M    +++ C   G + HF  A      
Sbjct: 310 RQQMYWMAGKWKTTGDGSGGQPYSSFRYMQDIMACKTYHIAC---GGVTHFALAPDQDEP 366

Query: 351 ---CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               I+WG +A  GELG G    KS+  P + + L G+ V +VA G   S  +
Sbjct: 367 GVMTIAWGQNAVNGELGMGANEPKSATKPSRNEPLRGVDVFAVAGGQNTSYFL 419


>gi|392564985|gb|EIW58162.1| RCC1/BLIP-II [Trametes versicolor FP-101664 SS1]
          Length = 547

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 195/413 (47%), Gaps = 37/413 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGAL-----DG------NLVSPTRLRPLVGVDIRFVAAGCVSC 68
           G +L CG T W  +G++         DG      +L+ P  LR L  +    +   CVSC
Sbjct: 19  GRVLICGGTDWPRLGKKDKGGKKGQEDGSANTSPDLLEPHILRSLSNIKAASIHTSCVSC 78

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGD--KIQRDRPTIVS--ELSKYK---IKKAGAGRSH 121
           +C+ +DV+G  + +GRN++  LG  D   I  + P  V+  +L   K   +  AG G+SH
Sbjct: 79  YCIVIDVDGAAWMFGRNDKSCLGLTDVDAISENEPRRVTAQDLGAPKGTRLVTAGCGKSH 138

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           T++V  +G   + G N+ GQ G       S    +    +  +  +V   A G  F+V L
Sbjct: 139 TLLVGSEGQLWSAGANQAGQCGHPACPQISTFKLVNGPKLGGVKEKVVQAAAGITFSVVL 198

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +  E   +   G  + GQL +G   E     S+ K A++ +  P  +  L    IVK+AC
Sbjct: 199 T--ESGKVFAFGSEEKGQLANGQAGERIV--SAGKSAFDYETEPILVRGLVERKIVKIAC 254

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G+ H +A+DS+G VY WG+ GY RLG   Q+D  VP+ +  F   N L   A I+AG  N
Sbjct: 255 GSQHAIALDSEGRVYGWGYNGYCRLGLGNQQDALVPKLIPQFAGPNELTMAADIAAGPSN 314

Query: 297 SSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS- 350
           S         YM GK KN GD      +   K + D+ G  +     G + H+  A    
Sbjct: 315 SVVIDKQNMYYMAGKWKNTGDGSGGQPFSTFKLIQDIMGCKIVHAACGGVTHWAIAQEEE 374

Query: 351 ---CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               I++G  A  GELG GP   KSS  P +   L G+ V+ +A G   S ++
Sbjct: 375 GVMTITFGQGALNGELGLGPNEPKSSTKPLQHKPLTGIDVLQIAAGQNTSYIL 427


>gi|336368615|gb|EGN96958.1| hypothetical protein SERLA73DRAFT_185217 [Serpula lacrymans var.
           lacrymans S7.3]
          Length = 550

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 191/413 (46%), Gaps = 36/413 (8%)

Query: 20  GELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G +L CG T W  +GR++         + + +L+ P  LR L  V I  + A C  CH +
Sbjct: 24  GRVLICGGTDWPKLGRKERGGKSEKDESENPDLLEPHILRSLSNVKISSIHASCCGCHFI 83

Query: 72  AVDVEGRCYTWGRN-ERGQLG------HGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTV 123
           A+D +G  + +GRN     LG        +K+ R  R + +      K   A  GR H++
Sbjct: 84  AIDTDGAAWMFGRNGPSAPLGVTGVDAISEKVPRRLRASDLGAPEYAKFVDAACGRGHSL 143

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRN----EIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +V  +G   + G N HGQ G          ++   P      E V   A G  F+V L+ 
Sbjct: 144 LVDSEGQVWSAGINNHGQCGHSVCAQVSTFKLVDGPFHNGARERVIKAAAGITFSVVLT- 202

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
            E   +   G  + GQLG+G   E+    +  K AY+ +  P  +  L  + IV+++CG 
Sbjct: 203 -ESGKVFTFGSGEKGQLGNGRTGEHIVTGN--KTAYDIEVEPIRVRGLDDKKIVQISCGQ 259

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            HTVA+DS+G VY WG+ GY RLG   Q+D  +P+ V  F   N     A + AG  N++
Sbjct: 260 QHTVALDSQGLVYVWGYNGYCRLGLGNQQDVLIPKIVPQFAGPNEATMGAHVFAGPSNTA 319

Query: 299 CTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD----- 348
                   +M GK KN+G+      +   + + D+    +     G + HF   D     
Sbjct: 320 IIDNQKMYWMAGKWKNSGEGSSGSPYSSFRFMQDIMACKMSNASCGGVTHFALTDDDDGG 379

Query: 349 SSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +  ++WG +A  GELG GP   KS+  P +   L G+ V S+A G   +L + 
Sbjct: 380 TMTVAWGQNAANGELGLGPDEPKSATKPTRHQPLSGIQVFSIAAGQNTTLFLA 432


>gi|336381401|gb|EGO22553.1| hypothetical protein SERLADRAFT_473539 [Serpula lacrymans var.
           lacrymans S7.9]
          Length = 553

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 126/429 (29%), Positives = 198/429 (46%), Gaps = 36/429 (8%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRK--------GALDGNLVSPTRLRPLVG 55
           + AE+     +  ++ G +L CG T W  +GR++         + + +L+ P  LR L  
Sbjct: 8   IPAEEPPASISVDQQWGRVLICGGTDWPKLGRKERGGKSEKDESENPDLLEPHILRSLSN 67

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRN-ERGQLG------HGDKIQRD-RPTIVSEL 107
           V I  + A C  CH +A+D +G  + +GRN     LG        +K+ R  R + +   
Sbjct: 68  VKISSIHASCCGCHFIAIDTDGAAWMFGRNGPSAPLGVTGVDAISEKVPRRLRASDLGAP 127

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN----EIEPSPVRCLVSE- 162
              K   A  GR H+++V  +G   + G N HGQ G          ++   P      E 
Sbjct: 128 EYAKFVDAACGRGHSLLVDSEGQVWSAGINNHGQCGHSVCAQVSTFKLVDGPFHNGARER 187

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   A G  F+V L+  E   +   G  + GQLG+G   E+    +  K AY+ +  P  
Sbjct: 188 VIKAAAGITFSVVLT--ESGKVFTFGSGEKGQLGNGRTGEHIV--TGNKTAYDIEVEPIR 243

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L  + IV+++CG  HTVA+DS+G VY WG+ GY RLG   Q+D  +P+ V  F   N
Sbjct: 244 VRGLDDKKIVQISCGQQHTVALDSQGLVYVWGYNGYCRLGLGNQQDVLIPKIVPQFAGPN 303

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMD 337
                A + AG  N++        +M GK KN+G+      +   + + D+    +    
Sbjct: 304 EATMGAHVFAGPSNTAIIDNQKMYWMAGKWKNSGEGSSGSPYSSFRFMQDIMACKMSNAS 363

Query: 338 SGNMHHFVGAD-----SSCISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
            G + HF   D     +  ++WG +A  GELG GP   KS+  P +   L G+ V S+A 
Sbjct: 364 CGGVTHFALTDDDDGGTMTVAWGQNAANGELGLGPDEPKSATKPTRHQPLSGIQVFSIAA 423

Query: 392 GYGHSLVIV 400
           G   +L + 
Sbjct: 424 GQNTTLFLA 432


>gi|395332007|gb|EJF64387.1| RCC1/BLIP-II [Dichomitus squalens LYAD-421 SS1]
          Length = 544

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 130/418 (31%), Positives = 193/418 (46%), Gaps = 42/418 (10%)

Query: 16  KEKGGELLFCGSTCWDAVG--------RRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS 67
           +++ G +L CG T W  +G         ++     +L  P  LR L  V    +   C  
Sbjct: 15  EQQWGRVLLCGGTDWTRLGKKDKGGKKNQEDGTSTDLPEPHILRSLSNVQAVSIHTSCAG 74

Query: 68  CHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVS--ELSKYK---IKKAGAGRS 120
           CHCV +DV+G  + +GRN++  +G    D I  + P  ++  EL   K      A  GR+
Sbjct: 75  CHCVVLDVDGVAWMFGRNDKSCMGVTGVDAISENEPRRLTAQELGAPKGTRFVHAACGRN 134

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---------EVTATACGAD 171
           HT++V  DG   + G N  GQ G  +   EI   P   LV+         +V   A G  
Sbjct: 135 HTLLVGSDGQLWSAGQNHAGQCGHPACP-EI---PSFKLVNGPKLSGQKEKVVIAAAGIT 190

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
           F++ L+  +   +   G  + GQLG+G   E     S+ K A++ +  P  +  LA   I
Sbjct: 191 FSLVLT--DSGKVFAFGSEEKGQLGNGRAGERIV--SAGKSAFDFEEEPILVRGLAERKI 246

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           V++ACG  H +A+DS G V+ WG+ GY RLG   Q D  VP++V  F   N L   A + 
Sbjct: 247 VQIACGPQHAIALDSDGRVFVWGYNGYCRLGLGNQVDALVPKQVPQFAGPNELTMGAYVV 306

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
           AG  NS      G  +M GK KN GD      +   K + D+ G  +     G + H+  
Sbjct: 307 AGPSNSVVIDKQGMYWMAGKWKNTGDGSGGQPFSTFKFIQDIMGCKIIHAACGGVTHWAL 366

Query: 347 ADSS----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           A        I++G  A   ELG+GP   KS+  P +   L G+ VI VA G   + ++
Sbjct: 367 AQEDDGVMTIAFGQGALNSELGHGPDQPKSATKPIQNKPLAGIDVIQVAAGQNTTFLL 424


>gi|449548155|gb|EMD39122.1| hypothetical protein CERSUDRAFT_46878, partial [Ceriporiopsis
           subvermispora B]
          Length = 529

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 189/407 (46%), Gaps = 45/407 (11%)

Query: 22  LLFCGSTCWDAVGRR----KGALDG-------NLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
           +L CG T W  +GR+    K   D        +L+ P  LR L  +    +   C++CHC
Sbjct: 2   VLLCGGTDWPRLGRKDRGGKKKDDTAEIEPGPDLLEPHILRSLSLIKAVSIHTTCIACHC 61

Query: 71  VAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVS--ELSKYK---IKKAGAGRSHTV 123
           V +D++G  + +GRNERG LG    D I  + P  ++  +L   K      A  G++HT+
Sbjct: 62  VVLDIDGVAWLFGRNERGALGVAGVDAISENAPRRLTAQQLGASKGTRFVNAACGKNHTL 121

Query: 124 VVTEDGNSLAFGWNKHGQLG--------SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
           +V  DG     G N +GQ G        S  + N  + +  +     V   A G  F++ 
Sbjct: 122 LVGSDGQVWTSGINNNGQCGHPVCPEITSFKLVNGPKSNGAK---ERVKKAAAGTTFSIV 178

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+  E   +   G  ++GQLGHG   E+    S+ K A++ +  P  +  L  + IV +A
Sbjct: 179 LT--ETGKVFAFGSGEHGQLGHGRTGEHIV--SAGKTAFDIEWEPIPVKGLDNKHIVDIA 234

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG  H+VA+D++G V+ WG+ GY RLG   QKD  +P+ V  F  +N +     I AG  
Sbjct: 235 CGAQHSVALDAEGMVHVWGYNGYCRLGLGHQKDILIPQVVPQFAGSNEMTRADKIVAGPS 294

Query: 296 NSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
           NS         +M GK KN GD        +   + + DL G  +     G + H+  A 
Sbjct: 295 NSVVIDKQKMYWMAGKWKNTGDGTCSVGQPYSSFRYIGDLMGVKITFAACGGVSHWALAL 354

Query: 349 SS----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
                  I +G  A  GELG GP   KS   P +   L G+ V+ +A
Sbjct: 355 DEDGLMTIVFGQGASNGELGLGPDEPKSVTKPAQHKRLIGIDVLQIA 401


>gi|302681079|ref|XP_003030221.1| hypothetical protein SCHCODRAFT_69149 [Schizophyllum commune H4-8]
 gi|300103912|gb|EFI95318.1| hypothetical protein SCHCODRAFT_69149 [Schizophyllum commune H4-8]
          Length = 550

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 134/424 (31%), Positives = 184/424 (43%), Gaps = 36/424 (8%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV 61
           A+L  +  V+   G E   E + C       + RR    + +L+ P  LR L  V    V
Sbjct: 28  AKLGRKDRVKAAEGVEP--EYVPCSPRATPLIHRR----NPDLLEPHILRSLSNVRAVSV 81

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS--EL---SKYKIKKA 115
              C SCH V +DV+G  + +GRN  GQLG  G  I  + P  ++  EL      +   A
Sbjct: 82  HTSCCSCHNVVIDVDGSAWLFGRNAHGQLGVPGTAISENAPRRLTPRELGASPTARFVHA 141

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGA 170
             GR HT++V ++G   A G N  GQ G        +   V  L  E     V   A G 
Sbjct: 142 ACGRYHTLLVADEGQVWAAGANTLGQCGQDVCPEINKFRRVSVLDREDNEEHVVKAAAGI 201

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
            F+V L+  +   +   G  + GQLG+G   E       V    E  P    I  LA  T
Sbjct: 202 SFSVVLT--KSGKLYAFGSAEKGQLGNGDTGERLATGQRVVFGIETVPL--LIKELANRT 257

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           IV V+ G  H +A+D  G V+ WG+ GY RLG  +QKD   P  V  F     +   +++
Sbjct: 258 IVDVSAGQQHCIAIDDAGVVFVWGYNGYCRLGLGDQKDRLKPVVVPHFAGPKEISMGSLV 317

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
           +AG  NS      G  YM GK KN+G+      W Y KP+ D+       +  G + HF 
Sbjct: 318 TAGPTNSVVVDKQGVYYMAGKWKNSGEGSVGSPWTYFKPIQDIMACRTTHVSCGGVTHFA 377

Query: 346 GADSS---------CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              +           + WG +A  GELG GP   KS+    K   L  + VI VA G   
Sbjct: 378 LTPNDEAGHEGKNMTVCWGQNAANGELGLGPDENKSATKATKNKPLLEVDVIDVAAGQHT 437

Query: 396 SLVI 399
           +L I
Sbjct: 438 TLFI 441


>gi|134114942|ref|XP_773769.1| hypothetical protein CNBH2220 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256397|gb|EAL19122.1| hypothetical protein CNBH2220 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 560

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 191/419 (45%), Gaps = 29/419 (6%)

Query: 20  GELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           G +L CG T W   GR++   G +  +L+ P  LR L  V    +  G  + + + +D+ 
Sbjct: 12  GRVLICGGTDWATNGRKERSSGKVPTDLMEPHILRSLCNVKASKIITGPSANYAIILDIH 71

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK-----KAGAGRSHTVVVTEDGNS 131
           G  Y +GR       +G  I  + P  +S  S    K        AGRSH ++V  +G+ 
Sbjct: 72  GAAYLFGRPPAMVQSNG-VISENTPLKISPSSVGSPKGTKWVNGAAGRSHFLLVDSNGDV 130

Query: 132 LAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
              G N  GQ+G           ++    VR   ++V     G  F+++L+      +  
Sbjct: 131 WGCGNNVVGQIGVPVAMVVEKLTKVAGPWVRDPEAKVVQVTAGHTFSLFLTFT--GQVYA 188

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
           +G  ++GQLG+G   E   K    K+AY+ +  PR +  L    I ++A G  H++A+D 
Sbjct: 189 SGSSEFGQLGNGKTGERLVKAG--KIAYDIEVPPRLVQGLENVKITEIASGNQHSLALDD 246

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            GYVY+WGF GY RLG ++QKD  +P  V  F  NN L     I+ G  +S+       +
Sbjct: 247 NGYVYSWGFAGYSRLGLQDQKDRLLPTIVPSFAGNNELTRARSIACGPTSSTVVDRQNMI 306

Query: 307 YMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGA---DSSCISWGHAQ 358
            + GK K +GD      +   K + D+    +    SG   HF+     +   ++ G  Q
Sbjct: 307 LIAGKWKLSGDGSTGQPYTRFKHIQDVMACKVIKTSSGGCTHFITTPDPEGGVMTVGFGQ 366

Query: 359 ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVIL 414
              YGELG G    KS+  P+K+  L G+ +I V  G   +L +    +    LD+  L
Sbjct: 367 GVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVVGGAFFTLFLARPNSALSDLDRYPL 425


>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
 gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
          Length = 1935

 Score =  149 bits (377), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 109/358 (30%), Positives = 166/358 (46%), Gaps = 66/358 (18%)

Query: 65   CVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            C   H +AVD     Y+WG ++ GQLGHG K + + RP ++ EL+  KI+   AG +H +
Sbjct: 1184 CGGEHTIAVDSNYFVYSWGSDKFGQLGHGTKAVNQSRPKVIEELTGQKIQAIAAGFAHNI 1243

Query: 124  VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----------SEVTATACGADFT 173
            V+ + G   +FG+   GQLG+GS  ++  P+ +               ++T  ACG   +
Sbjct: 1244 VLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQHHDGGKITQIACGFGHS 1303

Query: 174  VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            V  S  E   + + GL + GQLGH                +E   +PR I  L G  + K
Sbjct: 1304 VICS--ENGEVYSWGLGKQGQLGHKV--------------FENISKPRLIETLRG--VTK 1345

Query: 234  VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
            ++CG  HTVA      VY+WG G + +LGH   KDE VP+ VD F + NV          
Sbjct: 1346 ISCGHFHTVATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNV---------- 1395

Query: 294  SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI- 352
               S    G          +N+     +P    DL+  N    D  NM+   G  SS I 
Sbjct: 1396 ---SKVVCG----------QNHTMTITFPD---DLNNSNQDDEDEENMN---GKSSSPIY 1436

Query: 353  SWGHAQYGELGYG-----PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +WG A++G+LG G     P+  K   +P  +  +  +++I ++CG   S +I     +
Sbjct: 1437 AWGSAEHGKLGLGGDLKSPFFDK--PIPTAIKGVNSLNLIDISCGSDFSAMITSNNAI 1492



 Score =  101 bits (251), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 81/305 (26%), Positives = 134/305 (43%), Gaps = 35/305 (11%)

Query: 111  KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----SEVTAT 166
            K  K   G  H  V+T+DG    +G N+ GQLG G   N+    P R       S +   
Sbjct: 1123 KAIKVSCGWDHIAVITDDGELYTWGSNQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMV 1182

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
             CG + T+ + S     + + G  ++GQLGHGT         +V      Q RP+ I  L
Sbjct: 1183 ECGGEHTIAVDS--NYFVYSWGSDKFGQLGHGT--------KAVN-----QSRPKVIEEL 1227

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             G+ I  +A G  H + +   G ++++G+G +G+LG      + +P R+++      L  
Sbjct: 1228 TGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKNIPTRIEINAIMGGLQH 1287

Query: 287  E-----AVISAGSVNSSCTAGGGQLYMWGKLKNNG------DDWMYPKPLMDLSGWNLRC 335
                    I+ G  +S   +  G++Y WG  K         ++   P+ +  L G  +  
Sbjct: 1288 HDGGKITQIACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG--VTK 1345

Query: 336  MDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            +  G+ H     D  +  SWG  ++ +LG+     K  ++PK VD     +V  V CG  
Sbjct: 1346 ISCGHFHTVATTDLKNVYSWGSGEHMKLGHS--SDKDESVPKVVDFFIQKNVSKVVCGQN 1403

Query: 395  HSLVI 399
            H++ I
Sbjct: 1404 HTMTI 1408



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 61/234 (26%), Positives = 107/234 (45%), Gaps = 31/234 (13%)

Query: 64   GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
             C   H V     G  Y+WG  ++GQLGH       +P ++  L    + K   G  HTV
Sbjct: 1297 ACGFGHSVICSENGEVYSWGLGKQGQLGHKVFENISKPRLIETLRG--VTKISCGHFHTV 1354

Query: 124  VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS----- 177
              T+  N  ++G  +H +LG  S ++E  P  V   + + V+   CG + T+ ++     
Sbjct: 1355 ATTDLKNVYSWGSGEHMKLGHSSDKDESVPKVVDFFIQKNVSKVVCGQNHTMTITFPDDL 1414

Query: 178  -----------SVEGAS---ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                       ++ G S   I   G  ++G+LG G D         +K  +  +P P AI
Sbjct: 1415 NNSNQDDEDEENMNGKSSSPIYAWGSAEHGKLGLGGD---------LKSPFFDKPIPTAI 1465

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    ++ ++CG++ +  + S   +Y WG G +G++G+ +  D WVP R+ +
Sbjct: 1466 KGVNSLNLIDISCGSDFSAMITSNNAIYVWGCGRFGQIGNGKNDDVWVPTRISL 1519



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 68/272 (25%), Positives = 112/272 (41%), Gaps = 78/272 (28%)

Query: 147  IRNEIEPSPVRCLVSEVTA--TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
            I  E++  P+  L +E  A   +CG D    ++  +   +   G  Q GQLGHG   E N
Sbjct: 1106 IDPELKRFPMAPLKNEKKAIKVSCGWDHIAVIT--DDGELYTWGSNQSGQLGHGL--EVN 1161

Query: 205  TKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
               S           P+ +    G++ I  V CG  HT+AVDS  +VY+WG   +G+LGH
Sbjct: 1162 KTLS----------LPKRVDFFRGKSPIFMVECGGEHTIAVDSNYFVYSWGSDKFGQLGH 1211

Query: 264  REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
                                          +VN S                       PK
Sbjct: 1212 ---------------------------GTKAVNQS----------------------RPK 1222

Query: 324  PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDI-- 380
             + +L+G  ++ + +G  H+ V   S    S+G+  +G+LG G +  K+  +P +++I  
Sbjct: 1223 VIEELTGQKIQAIAAGFAHNIVLKKSGELFSFGYGDFGQLGTGSFHSKN--IPTRIEINA 1280

Query: 381  -------LEGMHVISVACGYGHSLVIVDRTNV 405
                    +G  +  +ACG+GHS++  +   V
Sbjct: 1281 IMGGLQHHDGGKITQIACGFGHSVICSENGEV 1312


>gi|170101426|ref|XP_001881930.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164643285|gb|EDR07538.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 533

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 190/430 (44%), Gaps = 51/430 (11%)

Query: 22  LLFCGSTCWDAVGRR---------KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
           +L CG T W  +GR+             + +L+ P  LR L+ V +  +   C  CH V 
Sbjct: 4   VLICGGTDWPKLGRKDRNPAKATPSEVQNPDLLEPNLLRSLLNVKVTSIHGSCSGCHFVV 63

Query: 73  VDVEGRCYTWGRNERGQLG---------HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           +D+ G  + +GRN    LG           +  +  +P  +      +   A  GR+HT+
Sbjct: 64  LDISGSAWLFGRNGSSALGLPASTTEYVSENAPKEVKPQDLGAAPGVRFVHAACGRNHTL 123

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS-------PVR--CLVSEVTATACGADFTV 174
           +V   G   A G N  GQ     +R  + P        PV     V  V   A G  F++
Sbjct: 124 LVGSCGTVWAAGANTLGQ-----VRVNVCPEVPSFKSVPVTHGGNVEHVVQAAAGITFSI 178

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+  E   + + G  + GQLG+GT  E     +  K  Y+ + +P  +  L G+ IV++
Sbjct: 179 VLT--ESGKVFSFGSAEKGQLGNGTTGERIITGN--KTGYDIEVQPVYLKELDGKKIVQI 234

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A G  HT+A+DS G VY WG+ GY RLG   Q D   P+ V  F   N     + I+AG 
Sbjct: 235 ASGQQHTLALDSTGLVYVWGYNGYCRLGLGNQVDALKPKVVPQFAGPNEATMASAIAAGP 294

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKP------LMDLSGWNLRCMDSGNMHHFV--- 345
            NS      G  +M GK KN+G+      P      + D+ G  +    SG + H++   
Sbjct: 295 SNSVAVDKQGMYWMAGKWKNSGEAGSSGSPYSTFRFMQDIMGCKILLARSGGVTHWLLTP 354

Query: 346 GADSSCIS--WG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
             D S ++  WG +A  GELG G    KS+  P +   L G+ V  +A G   +L++   
Sbjct: 355 DDDGSVMTVCWGQNAANGELGLGQDEPKSATKPTRNIPLVGIDVFDIAAGQNTTLLLAKP 414

Query: 403 TNVGERLDQV 412
               E+ D +
Sbjct: 415 N---EKFDDL 421


>gi|403413890|emb|CCM00590.1| predicted protein [Fibroporia radiculosa]
          Length = 557

 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 192/423 (45%), Gaps = 50/423 (11%)

Query: 20  GELLFCGSTCWDAVGRR------KGALDGN-----LVSPTRLRPLVGVDIRFVAAGCVSC 68
           G +L CG T W  +GR+      K A + N     L+ P  LR L  +    +   CV C
Sbjct: 22  GRVLICGGTDWPKLGRKDRGGASKKAQEVNVGGPDLLEPHILRSLSNIKAASIHTSCVGC 81

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVS--ELSKYK---IKKAGAGRSH 121
           H V +D +G  + +GRNER  LG    D I  + P  ++  +L   K      A  GRSH
Sbjct: 82  HIVVLDTDGVAWLFGRNERSSLGFPGVDAISENAPRSLTAQDLGSQKGTRFVHAACGRSH 141

Query: 122 TVVVTEDGNSLAFGWNKHGQ--------LGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
           T++V   G     G N  GQ        + +  + N I+   V+     V   A G  F+
Sbjct: 142 TLLVGSGGQLWTSGANNAGQCAHPPCAEISTFKLVNGIKHGNVK---ENVVQAAAGVTFS 198

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + L+  +   + + G  ++GQLG+G   E+    ++ K A++ +  P  +  L  + IV+
Sbjct: 199 IVLT--QSGKVFSFGSGEHGQLGNGKTGEHIV--TAGKTAFDIEWEPLLVRGLDDKVIVQ 254

Query: 234 VACGTNHTVAVDSKG------YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
           +ACG  H+VA+DS G       VY WG+ GY RLG   Q+D  +P+ V  F   N     
Sbjct: 255 IACGQQHSVALDSTGSAVHVAIVYVWGYNGYCRLGLGNQQDVLIPKVVPQFAGPNEPTMG 314

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMH 342
           A I AG  N+         +M GK K  GD      +   + L D+ G  +     G + 
Sbjct: 315 AEIIAGPSNTVVIDKQRMYWMAGKWKTTGDGSSGQPYSTFRYLQDIMGCKITHAACGGVT 374

Query: 343 HFVGADSS-----CISWGH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           H+  +         I++G  A  GELG GP+  KS+  P +   L G+ V+ VA     +
Sbjct: 375 HWALSPDDDGGIMTIAFGQGAANGELGLGPHEAKSATKPTRHQPLIGIDVLQVAAAQNTT 434

Query: 397 LVI 399
           L++
Sbjct: 435 LLL 437


>gi|402223780|gb|EJU03844.1| RCC1/BLIP-II [Dacryopinax sp. DJM-731 SS1]
          Length = 551

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 126/420 (30%), Positives = 182/420 (43%), Gaps = 35/420 (8%)

Query: 12  EETGKEKGGELLFCGSTCWDAVGRRKGALDG---NLVSPTRLRPLVGVDIRFVAAGCVSC 68
           ++T KEK G +L CG T W A+G++    D    +L  P  LR L  V    V      C
Sbjct: 9   DQTEKEKWGRVLLCGGTNWLALGKKGLPADPEYPDLPLPHTLRSLSNVKATGVYTSHSGC 68

Query: 69  HCVAVDVEGRCYTWGRNERGQLG--HGDKI-------QRDRPTIVSELSKYKIKKAGAGR 119
           H + +DV G  Y +GRN    LG  H  +         R  PT V      K   A  GR
Sbjct: 69  HVIVLDVAGAAYLFGRNTSSCLGVPHTSRPFISQYTPLRLLPTDVGAAPGTKFVYAACGR 128

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGS-----IRNEIEPSPVRCLVSEVTATA-CGADFT 173
           +H+V+V ++G+    G N HGQ G  +         I     R  V E    A  G +FT
Sbjct: 129 AHSVLVGDEGSVWTAGLNAHGQCGHPAGGEMGTWKLITGGWARAKVGEKAVQASAGVNFT 188

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + L+  E   +   G  ++GQL +G   E   + +      E +P P     L  +   +
Sbjct: 189 LVLT--ENGKVYAFGSGEHGQLANGRTGERIAQANKTTYDIEDEPIP-VRGPLEDKVTTQ 245

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG  H +A+ S G VY WGF GY RLG    KD  +P  V  +   NVL   A ++AG
Sbjct: 246 VACGQQHAIALTSDGLVYVWGFNGYCRLGLGHPKDMLIPTLVPQYAGPNVLMRAAFVAAG 305

Query: 294 SVNSSCTAGGGQLYMWGKLKNN-----GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
             ++        L M GK K +     G  +   +   ++ G  +    +G + HF  A 
Sbjct: 306 PTSTIVIDRQKMLQMAGKFKTSGAGSVGQPFSTFRYFPEIQGCKVLLAAAGGVTHFATAV 365

Query: 349 SS--------CISWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                      I+WG +A   ELG G    KS+  P +++ L G+ V ++A G   S  +
Sbjct: 366 DEDAGPGGVMTIAWGQNAINSELGLGEGQPKSTPKPVRMETLNGIDVFALAAGQNTSFFL 425


>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
 gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
          Length = 437

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 117/357 (32%), Positives = 174/357 (48%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       TWGR E GQLGHGD   R  PTI+S L   +I     
Sbjct: 16  VLLISAG--ASHSVALLSGNVVCTWGRGEDGQLGHGDAQDRLSPTILSTLEGLEIISVIC 73

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT+  +E    + ++GW   G+LG G+  +   P P+R L   ++   ACG D    
Sbjct: 74  GADHTIAYSESHTDVYSWGWGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIACG-DSHCL 132

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG GT     T+DS V         P+ I A  G  I  VA
Sbjct: 133 AVTMEG-QVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQAFQGVPIKMVA 177

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++KD  VP +V +     ++    +++ G  
Sbjct: 178 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEKMV----MVACGWR 233

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  L G  +  +  G  H   V +D
Sbjct: 234 HTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSD 293

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    +SS  P +V +     VI ++CG+ H+L + +R NV
Sbjct: 294 GKLYGWGWNKFGQVGVGDNVDRSS--PVQVKLPLEQKVILISCGWRHTLAVTERQNV 348



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 133/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  +R L G+ I+ +A  C   HC+AV +EG+  +WGRN+ GQ
Sbjct: 93  WGDFGRLGHGNSSDLFTPQPIRQLHGLKIKQIA--CGDSHCLAVTMEGQVQSWGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       IK   AG  HT  VTEDG    +GW ++G LG G  ++
Sbjct: 151 LGLGTTEDSLVPQKIQAFQGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRKD 210

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E +   ACG   T+ +SS  G  +   G  +YGQLGHG          
Sbjct: 211 RLVPEKVSLPHGEKMVMVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------- 259

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                Y     P  + AL G  I +++ G  HT+AV S G +Y WG+  +G++G  +  D
Sbjct: 260 -----YADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNVD 314

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P +V +     V+    +IS G  ++        ++ WG+  N
Sbjct: 315 RSSPVQVKLPLEQKVI----LISCGWRHTLAVTERQNVFSWGRGTN 356



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 2/113 (1%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +L  L G  I  ++ G    H +AV  +G+ Y WG N+ GQ+G GD + R  P  V  
Sbjct: 266 PHQLEALQGSFISQISGGWR--HTMAVTSDGKLYGWGWNKFGQVGVGDNVDRSSPVQVKL 323

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
             + K+     G  HT+ VTE  N  ++G   +GQLG+G   +   P  ++ L
Sbjct: 324 PLEQKVILISCGWRHTLAVTERQNVFSWGRGTNGQLGNGECTDRNVPVIIKAL 376


>gi|299744444|ref|XP_001831041.2| hypothetical protein CC1G_03932 [Coprinopsis cinerea okayama7#130]
 gi|298406129|gb|EAU90663.2| hypothetical protein CC1G_03932 [Coprinopsis cinerea okayama7#130]
          Length = 542

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 176/389 (45%), Gaps = 26/389 (6%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G      + +L+ P  LR L+ V I  +   C  CH VA+D+ G  + +GRN    LG  
Sbjct: 18  GENDAIFNPDLLEPNILRSLLNVKIVSIHTSCAGCHFVALDIHGTAWLFGRNGFSCLGIA 77

Query: 94  D--KIQRD-----RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
           D   +  +     +PT +      K   A  GR+HT++V  DG+  A G N  GQ G   
Sbjct: 78  DVDYVSENAPVPLKPTDLGAPQGTKFVHAACGRNHTLLVGSDGSVWAAGANNVGQCGQPP 137

Query: 147 IRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
             +     PV  +      +V   + G  F++ L+      + + G  + GQLG+G   E
Sbjct: 138 SPDVPAFKPVSVVHGGNREKVVQASAGISFSLVLTDT--GKVFSFGSAEKGQLGNGVTGE 195

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                +  K  ++ + +P  +  L  + +VK++ G  H++A+D  G VY WGF GY RLG
Sbjct: 196 RIL--TGNKTGFDIEWQPVFVKELKDKKVVKISSGQQHSLAIDDAGTVYGWGFNGYCRLG 253

Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD----- 317
              Q D   P+ +  F         A I+AG  +S      G  +M GK KN+G+     
Sbjct: 254 LGNQVDALKPKVIPQFAGPEEATMGADIAAGPTSSIVIDKQGMFWMAGKWKNSGEGSSGS 313

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS-----CISWG-HAQYGELGYGPYGQKS 371
            +   + + D+ G  +    SG + H++           + WG +A  GELG G    KS
Sbjct: 314 PYSTFRFMQDIMGCKILLARSGGVTHWLTTPDEDGSPMTVCWGQNAANGELGLGLDEPKS 373

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIV 400
           S  P K   L G+HVI +A G   +L++ 
Sbjct: 374 STKPTKNMPLSGIHVIDIAAGQNTTLLLA 402


>gi|405122279|gb|AFR97046.1| RCC2 protein [Cryptococcus neoformans var. grubii H99]
          Length = 547

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 188/427 (44%), Gaps = 36/427 (8%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
           M  E       G +L CG T W            +L+ P  LR L  V    +  G  + 
Sbjct: 1   MANESVEGSTWGRVLICGGTDWPT----------DLMEPHILRSLCNVKASKIITGPSAN 50

Query: 69  HCVAVDVEGRCYTWGR-----NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           + + +D+ G  Y +GR        G +     + +  P+ V      K     AGRSH +
Sbjct: 51  YAIVLDIHGATYLFGRPPAMVQSNGVISESTPL-KISPSSVGSPKGTKWVNGAAGRSHFL 109

Query: 124 VVTEDGNSLAFGWNKHGQLGS--GSIRNEIEPSP---VRCLVSEVTATACGADFTVWLSS 178
           +V   G+    G N  GQ+G    ++ +++       V+   ++V     G  F+++L+S
Sbjct: 110 LVDSKGDVWGCGNNVFGQIGVPVATVVDKLTKVTGPWVKDPEAKVVQVTAGHTFSLFLTS 169

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                +  +G  ++GQLG+G   E   K    K+AY+ +  PR +       I+++A G 
Sbjct: 170 T--GQVYASGSSEFGQLGNGKTGERLVKAG--KIAYDIEVPPRLVQGFENVKIIEIASGN 225

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H++A+D  GYVY+WGF GY RLG ++QKD  +P  V  F  NN L     I+ G  +S+
Sbjct: 226 QHSLALDDNGYVYSWGFAGYSRLGLQDQKDRLLPTIVPSFAGNNELTRARSIACGPTSST 285

Query: 299 CTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHFV---GADSS 350
                  + + GK K +GD      +   K + D+    +    SG   HF+     +  
Sbjct: 286 VIDRQNMILIAGKWKLSGDGSTGQPYTRFKHIQDVMACKVIKTSSGGCTHFIITPDPEGG 345

Query: 351 CISWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
            ++ G  Q   YGELG G    KS+  P+K+  L G+ +I V  G   +L +        
Sbjct: 346 VMTVGFGQGVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVVGGAFFTLFLARPNLALS 405

Query: 408 RLDQVIL 414
            LD+  L
Sbjct: 406 DLDRYPL 412


>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 461

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 166/360 (46%), Gaps = 31/360 (8%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           GV  + +A    + H VA+       +WGR E GQLGHGD  +R  PTIVS L   +I  
Sbjct: 11  GVRRQVLALSAGASHSVALLSGDLVCSWGRGEDGQLGHGDAEERHFPTIVSALDDCEISS 70

Query: 115 AGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADF 172
              G  HT  ++    ++ ++GW   G+LG G+  +   P P++ L   EV   ACG   
Sbjct: 71  VTCGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIKALKGLEVKQIACGDSH 130

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
              L+      +L  G  Q GQLG G   +  T              P  + A  G  + 
Sbjct: 131 C--LAITTDGEVLGWGRNQNGQLGLGHTEDVLT--------------PHKLTAFEGVAVK 174

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            +A G  HT AV   G +Y WG+G YG LG  +++D  VP +V       +     +++ 
Sbjct: 175 MLAAGAEHTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPDQVAAVAGELM----KMVAC 230

Query: 293 GSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-V 345
           G  ++ C A  G +Y +G  K     +GD  D + P  +  L    ++ +  G  H F +
Sbjct: 231 GWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKIQAITGGWRHTFAL 290

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +D     WG  ++G++G G    +SS  P+ V  L+   V  V CG+ H+L + DR NV
Sbjct: 291 DSDGRLYGWGWNKFGQVGCGNTEDQSS--PQLVKGLQDQVVTVVQCGWRHTLAMTDRGNV 348



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 130/260 (50%), Gaps = 22/260 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++++P +L    GV ++ +AAG    H  AV   G+ Y WG    G LG GD+  R  P 
Sbjct: 158 DVLTPHKLTAFEGVAVKMLAAGAE--HTTAVTENGKLYGWGWGRYGNLGLGDREDRLVPD 215

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V+ ++   +K    G  HT+ V E GN   FGW+K+GQLG G   + + P  V+ L S+
Sbjct: 216 QVAAVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSK 275

Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            + A   G   T  L S     +   G  ++GQ+G G     NT+D         Q  P+
Sbjct: 276 KIQAITGGWRHTFALDS--DGRLYGWGWNKFGQVGCG-----NTED---------QSSPQ 319

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +  L  + +  V CG  HT+A+  +G VY+WG G  G+LGH +  D   P+R+++   +
Sbjct: 320 LVKGLQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSD 379

Query: 282 NVLPPEAVISAGSVNSSCTA 301
                E + S+GS N  CT+
Sbjct: 380 G-FACEQIESSGSSN--CTS 396



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 156/344 (45%), Gaps = 33/344 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC-YTWGRNERGQLGHGDKIQRDRPTIVS 105
           PT +  L   +I  V   C + H  A+    +  Y+WG  + G+LGHG+      P  + 
Sbjct: 57  PTIVSALDDCEISSVT--CGADHTTALSNSTKTVYSWGWGDFGRLGHGNSSDLFIPQPIK 114

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   ++K+   G SH + +T DG  L +G N++GQLG G   + + P  +       V 
Sbjct: 115 ALKGLEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTEDVLTPHKLTAFEGVAVK 174

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ T   +  E   +   G  +YG LG G        D   +L       P  +A
Sbjct: 175 MLAAGAEHTT--AVTENGKLYGWGWGRYGNLGLG--------DREDRLV------PDQVA 218

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           A+AGE +  VACG  HT+ V   G +YT+G+  YG+LGH +  D  +P +V   +   + 
Sbjct: 219 AVAGELMKMVACGWRHTICVAESGNMYTFGWSKYGQLGHGDFADHLIPHQVQALKSKKI- 277

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDS 338
                I+ G  ++      G+LY WG  K       N +D   P+ +  L    +  +  
Sbjct: 278 ---QAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKGLQDQVVTVVQC 334

Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           G  H     D   + SWG    G+LG+G    +S+  PK+++IL
Sbjct: 335 GWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRST--PKRIEIL 376



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 11/148 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L    I+ +  G    H  A+D +GR Y WG N+ GQ+G G+   +  P +V  
Sbjct: 266 PHQVQALKSKKIQAITGGWR--HTFALDSDGRLYGWGWNKFGQVGCGNTEDQSSPQLVKG 323

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA- 165
           L    +     G  HT+ +T+ GN  ++G    GQLG G   +   P  +  L S+  A 
Sbjct: 324 LQDQVVTVVQCGWRHTLAMTDRGNVYSWGRGTSGQLGHGDTVDRSTPKRIEILSSDGFAC 383

Query: 166 --------TACGADFTVWLSSVEGASIL 185
                   + C +  + W+S  E  +++
Sbjct: 384 EQIESSGSSNCTSKTSNWISPAERYAVV 411


>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 441

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 169/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       TWGR E GQLGHGD   R  PT++S      I     
Sbjct: 16  VVLVSAG--ASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVIC 73

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +ED + + ++GW   G+LG G+  +   P PV+ L   ++   ACG      
Sbjct: 74  GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHC-- 131

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      +L+ G  Q GQLG GT     T+DS +         P+ I A  G ++  +A
Sbjct: 132 LAVTMAGEVLSWGRNQNGQLGLGT-----TEDSLL---------PQTIQAFEGISVKMIA 177

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D +VP +V   + + ++    +++ G  
Sbjct: 178 AGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV----LVACGWR 233

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  +  L   +   +  G  H   + +D
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G      S  P +V+  E   V  VACG+ H+L   ++ NV
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCS--PAQVNFPEEQKVAQVACGWRHTLAFTEKKNV 348



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 23/283 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 93  WGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA--CGDSHCLAVTMAGEVLSWGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRND 210

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +  + +   ACG   T+ +SS    S+   G  +YGQLGHG          
Sbjct: 211 RFVPEKVSSVEGDKMVLVACGWRHTITVSS--SGSLYTYGWSKYGQLGHGD--------- 259

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   +  +++ G  HT+A+ S G +Y WG+  +G++G  +  D
Sbjct: 260 -----FEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNAD 314

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              P +V+  +   V    A ++ G  ++        ++ WG+
Sbjct: 315 HCSPAQVNFPEEQKV----AQVACGWRHTLAFTEKKNVFAWGR 353



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           A+A  A   +V V+ G +H+VA+ +   + TWG G  G+LGH + +D  VP  +  F   
Sbjct: 7   AVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP 66

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRC 335
            +    +VI      ++ +    Q+Y W     G+L + N  D   P+P+  L G  ++ 
Sbjct: 67  GIT---SVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           +  G+ H   V      +SWG  Q G+LG G    + S +P+ +   EG+ V  +A G  
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT--TEDSLLPQTIQAFEGISVKMIAAGAE 181

Query: 395 HSLVIVDRTNV 405
           H+  + +  ++
Sbjct: 182 HTAAVTEDGDI 192



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 45/91 (49%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G+ Y WG N+ GQ+G GD      P  V+   + K+ +   G  HT+  TE 
Sbjct: 286 HTMALTSDGKLYGWGWNKFGQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFTEK 345

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            N  A+G    GQLG G I +   P  +  L
Sbjct: 346 KNVFAWGRGTSGQLGHGEIVDRNTPVIIDAL 376



 Score = 41.2 bits (95), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 21/79 (26%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+     + +  SP ++      + +     C   H +A   +   + WGR   GQ
Sbjct: 301 WNKFGQVGAGDNADHCSPAQVN--FPEEQKVAQVACGWRHTLAFTEKKNVFAWGRGTSGQ 358

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LGHG+ + R+ P I+  LS
Sbjct: 359 LGHGEIVDRNTPVIIDALS 377


>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
          Length = 658

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 179/401 (44%), Gaps = 53/401 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N   P  +  L G+ I+ +   C S H +A+D  G+  +WGR E GQLGH        P+
Sbjct: 96  NSQRPQEVVSLAGLSIKLIT--CGSDHVLALDASGKIRSWGRGESGQLGHASFSHSSTPS 153

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
           I+ EL+  ++K+   G + +  + E G    +G N++GQLG G   +   P   R L S 
Sbjct: 154 IIDELASQRVKEVACGVAFSAALMEGGQLYTWGCNRYGQLGQGDRTSSAIP---RMLPSM 210

Query: 162 ---EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
               V   ACGA   V L++     +   G   YGQLGHG   ++  +            
Sbjct: 211 NHRHVHLMACGAAHIVVLTTSR--DVYTWGNNSYGQLGHGFRKKHCLQ------------ 256

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P+++  ++G  I ++  G NH+  + S G +YTWG G +G+LGH + + + +P  +   
Sbjct: 257 -PKSVRVMSGLDIKQIVAGENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLLSPL 315

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--------------LKNN--GDDWMYP 322
                    ++I +G+         G +Y WG+               K+N    D + P
Sbjct: 316 DPKTQ---ASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISP 372

Query: 323 KPLMDLS------GWNLRCMDSGNMHHFVG---ADSSCISWGHAQYGELGYGPYGQKSSA 373
           K +   +        +L  +  G+ HH +       +  +WG  ++G+LG  P       
Sbjct: 373 KIISFFAASEEHDAISLSSISCGS-HHVLAITEKKDTLFAWGRGEHGQLGLDPRDTSFRP 431

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVIL 414
           +P++V  ++GM V++ AC   HS+V+      G + D  + 
Sbjct: 432 IPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVF 472



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 122/264 (46%), Gaps = 44/264 (16%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +R + G+DI+ + AG    H   +   G  YTWGR + GQLGHGD   +D PT++
Sbjct: 255 LQPKSVRVMSGLDIKQIVAG--ENHSCVMTSFGDIYTWGRGDFGQLGHGDMESKDIPTLL 312

Query: 105 SELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNE-----IEP 153
           S L  K +     +G    + +T  G   ++G N  GQLG G     S  N      I P
Sbjct: 313 SPLDPKTQASLIVSGADFIMAMTYSGAVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISP 372

Query: 154 SPVRCLVSE-------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
             +    +        +++ +CG+   + ++  +  ++   G  ++GQLG       + +
Sbjct: 373 KIISFFAASEEHDAISLSSISCGSHHVLAITEKKD-TLFAWGRGEHGQLG------LDPR 425

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS------KG--YVYTWGFGGY 258
           D+S +      P P+ +  + G  ++  AC  NH+V V +      KG   V++WG G +
Sbjct: 426 DTSFR------PIPQEVKKMKGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSF 479

Query: 259 GRLGHREQKDEWVPRRVDVFQRNN 282
           G+LG+   K   VP   +  Q N 
Sbjct: 480 GQLGYGSGK---VPVMKETVQDNQ 500


>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
 gi|60467743|gb|EAL65761.1| regulator of chromosome condensation  domain-containing protein
            [Dictyostelium discoideum AX4]
          Length = 2083

 Score =  140 bits (352), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 84/247 (34%), Positives = 127/247 (51%), Gaps = 28/247 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIV 104
            +P RL    G     +   C   H + VD +   Y+WG+++ GQLGHG K + ++RP I+
Sbjct: 1262 TPKRLEFFRGKS-PIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHGTKSVSQNRPKII 1320

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---- 160
             ++S  KI+   AG +HT+V+ + G   +FG+   GQLG GS  ++  P+ +        
Sbjct: 1321 EDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIELNTIVGI 1380

Query: 161  ----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
                 ++T  ACG   +V  S  +   + + GL + GQLGHG               YE+
Sbjct: 1381 QHGGGKITQIACGFGHSVICS--DNGEVYSWGLGKQGQLGHGN--------------YES 1424

Query: 217  QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
              RPR I AL G  + K++CG  +T+A      VY+WG G + +LGH   K+E  PR VD
Sbjct: 1425 IARPRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATPRVVD 1482

Query: 277  VFQRNNV 283
             F + NV
Sbjct: 1483 FFIQKNV 1489



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 39/303 (12%)

Query: 114  KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----SEVTATACG 169
            K   G  H  +++E G    +G N+ GQLG G    +I+ +P R       S +    CG
Sbjct: 1222 KVSCGWDHVALISESGELFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGKSPIIMVECG 1281

Query: 170  ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             + ++ + S     + + G  ++GQLGHGT +              +Q RP+ I  ++G+
Sbjct: 1282 GEHSICVDS--DYVVYSWGQDKFGQLGHGTKSV-------------SQNRPKIIEDISGQ 1326

Query: 230  TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE-- 287
             I  +A G  HT+ +   G +Y++G+G  G+LGH     + +P R+++   N ++  +  
Sbjct: 1327 KIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSIPTRIEL---NTIVGIQHG 1383

Query: 288  ----AVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMD 337
                  I+ G  +S   +  G++Y WG  K       N +    P+ +  L G  +  + 
Sbjct: 1384 GGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHGNYESIARPRLIEALKG--VTKIS 1441

Query: 338  SGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             G+ +     D  +  SWG  ++ +LG+G    K+ A P+ VD     +V  + CG  H+
Sbjct: 1442 CGHFYTMATTDLKNVYSWGLGEHMKLGHG--SDKNEATPRVVDFFIQKNVSKIVCGLNHT 1499

Query: 397  LVI 399
            + +
Sbjct: 1500 ITL 1502



 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 74/294 (25%), Positives = 123/294 (41%), Gaps = 71/294 (24%)

Query: 42   GNLVS---PTR--LRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            G+ VS   PTR  L  +VG+     +     C   H V     G  Y+WG  ++GQLGHG
Sbjct: 1361 GSFVSKSIPTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEVYSWGLGKQGQLGHG 1420

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            +     RP ++  L    + K   G  +T+  T+  N  ++G  +H +LG GS +NE  P
Sbjct: 1421 NYESIARPRLIEALKG--VTKISCGHFYTMATTDLKNVYSWGLGEHMKLGHGSDKNEATP 1478

Query: 154  SPVRCLVSE-VTATACGADFTVWLS----------------------------------- 177
              V   + + V+   CG + T+ L+                                   
Sbjct: 1479 RVVDFFIQKNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSL 1538

Query: 178  ----------------SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
                            + + + I   G  ++G+LG G D         +K  +  +P P 
Sbjct: 1539 TNDNNNGRSGRLGLNENSQVSPIYACGAGEHGKLGLGGD---------LKSPFFDKPIPT 1589

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            AI  +    ++ ++CGT+ T  + S G +Y WG+G +G++G+ +  D WVP R+
Sbjct: 1590 AIKGVNALNLIDISCGTDFTAMITSNGALYVWGYGNFGQIGNGKTDDAWVPIRI 1643



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 57/218 (26%), Positives = 101/218 (46%), Gaps = 19/218 (8%)

Query: 204  NTKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            N    S+KL  + +     +  L  E   +KV+CG +H   +   G ++TWG    G+LG
Sbjct: 1192 NIHSKSIKLKPDPELMICPMPPLKNEKRAIKVSCGWDHVALISESGELFTWGKNQSGQLG 1251

Query: 263  HREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------- 313
            H     K +  P+R++ F+  +   P  ++  G  +S C      +Y WG+ K       
Sbjct: 1252 HGLDIGKIQTTPKRLEFFRGKS---PIIMVECGGEHSICVDSDYVVYSWGQDKFGQLGHG 1308

Query: 314  NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS 372
                    PK + D+SG  ++ + +G  H  V   S  + S+G+   G+LG+G +  KS 
Sbjct: 1309 TKSVSQNRPKIIEDISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQGQLGHGSFVSKSI 1368

Query: 373  AMPKKVDILEGMH-----VISVACGYGHSLVIVDRTNV 405
                +++ + G+      +  +ACG+GHS++  D   V
Sbjct: 1369 PTRIELNTIVGIQHGGGKITQIACGFGHSVICSDNGEV 1406


>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 545

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 170/351 (48%), Gaps = 29/351 (8%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R V   C S H V +  EG  YTWGR + G+LGHGD   +  P +V EL    I++   G
Sbjct: 35  RIVQIACGSGHTVVLTEEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCG 94

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
             HT  VT  G+   +G   +G+LG G+      P  V  L S +V   ACG+  TV L 
Sbjct: 95  SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVL- 153

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +E   +   G  + G  GHG D E +            Q  P  +  L G++IV+++  
Sbjct: 154 -LENKDVYTWGDKENGVSGHG-DTEGH------------QYLPCPVEELRGKSIVQISAC 199

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
             HT A+   G V+T+G G +GRLGH  ++++ V R VD      V      ++ G  ++
Sbjct: 200 GFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVDALAGKRV----KQVACGGFHT 255

Query: 298 SCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
           +     G++Y WG  ++    +GD  +   P  +  L    +  +  G  H     D+  
Sbjct: 256 AAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLVLQITCGWSHTVTLTDTGE 315

Query: 352 I-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + +WG+  +G+LG+    + +  +PK VD+L+G  VISVA    H++ +VD
Sbjct: 316 VYTWGNGDHGKLGHNDTAKVT--LPKPVDVLDGKRVISVASYNEHTVALVD 364



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 104/207 (50%), Gaps = 21/207 (10%)

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G D +    D+S       Q RP  I ALA   IV++ACG+ HTV +  +G VYTWG 
Sbjct: 7   GRGEDGQLGLGDTS------DQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGR 60

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
           G  GRLGH +   ++VPR V+  +  N+      ++ GS +++     G LY W     G
Sbjct: 61  GDDGRLGHGDNGWKFVPRLVEELRGKNIRQ----VTCGSYHTAAVTVSGDLYTWGGGMYG 116

Query: 311 KLKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPY 367
           KL  +G++  +  P +   L    +R +  G+ H  V  ++  + +WG  + G  G+G  
Sbjct: 117 KL-GHGNETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDT 175

Query: 368 GQKSSAMPKKVDILEGMHVISV-ACGY 393
            +    +P  V+ L G  ++ + ACG+
Sbjct: 176 -EGHQYLPCPVEELRGKSIVQISACGF 201



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 68/138 (49%), Gaps = 5/138 (3%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L G  ++ VA  C   H  AV   G  YTWG  E GQLGHGDK+ +  PT V  L +  +
Sbjct: 240 LAGKRVKQVA--CGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLLEKLV 297

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGAD 171
            +   G SHTV +T+ G    +G   HG+LG         P PV  L  + V + A   +
Sbjct: 298 LQITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVTLPKPVDVLDGKRVISVASYNE 357

Query: 172 FTVWLSSVEGASILNAGL 189
            TV L  V+  ++L A +
Sbjct: 358 HTVAL--VDPVAMLRASM 373



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 13/163 (7%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           VY+WG G  G+LG  +  D+  P  +D      ++     I+ GS ++      G++Y W
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQ----IACGSGHTVVLTEEGEVYTW 58

Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
                G+L +  + W + P+ + +L G N+R +  G+ H   V       +WG   YG+L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGDLYTWGGGMYGKL 118

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+G   +   + P  V+ L+ M V  VACG  H++V+++  +V
Sbjct: 119 GHG--NETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDV 159


>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 441

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 109/358 (30%), Positives = 170/358 (47%), Gaps = 35/358 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L    I     
Sbjct: 16  VLLISAG--ASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALDAQHIDSIAC 73

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT+  +E  N L ++GW   G+LG G+  + + P P+  L    +   ACG D    
Sbjct: 74  GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACG-DSHCL 132

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     NT+DS V         P+ I A  G  I  VA
Sbjct: 133 AVTMEG-EVQSWGRNQNGQLGLG-----NTEDSLV---------PQKIQAFKGVPIKMVA 177

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H+VA+   G +Y WG+G YG LG  ++ D W P +V     + ++    +++ G  
Sbjct: 178 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDKMV----MVACGWR 233

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           ++   +  G +Y +G  K       N +D + P+ L  LS   L    SG   H +   S
Sbjct: 234 HTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSD-KLISQVSGGWRHSMALTS 292

Query: 350 S--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +     WG  ++G++G G      S  P +V   +   V+ ++CG+ H++ + ++ NV
Sbjct: 293 TGLLFGWGWNKFGQVGVGDNLDHCS--PVQVKFPQDQRVVQISCGWRHTIAVTEKENV 348



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 137/286 (47%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L+ P  +  L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 93  WGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +       IK   AG  H+V +TE+G    +GW ++G LG G   +
Sbjct: 151 LGLGNTEDSLVPQKIQAFKGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 210

Query: 150 EIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +   ++   ACG   T+ +SS  G  I   G  +YGQLGHG     N +DS
Sbjct: 211 RWNPEKVSSVDCDKMVMVACGWRHTISVSSSGG--IYTYGWSKYGQLGHG-----NFEDS 263

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            V         P+ + AL+ + I +V+ G  H++A+ S G ++ WG+  +G++G  +  D
Sbjct: 264 LV---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLD 314

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P +V   Q   V+     IS G  ++        ++ WG+  N
Sbjct: 315 HCSPVQVKFPQDQRVVQ----ISCGWRHTIAVTEKENVFSWGRGTN 356



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 160/344 (46%), Gaps = 33/344 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           PT+L  L    I  +A  C + H +A  +     Y+WG  + G+LGHG+      P  + 
Sbjct: 57  PTQLSALDAQHIDSIA--CGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII 114

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   +IK+   G SH + VT +G   ++G N++GQLG G+  + + P  ++      + 
Sbjct: 115 ALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAFKGVPIK 174

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ +V ++  E   +   G  +YG LG G  N+              +  P  ++
Sbjct: 175 MVAAGAEHSVAIT--ENGELYGWGWGRYGNLGLGDRND--------------RWNPEKVS 218

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           ++  + +V VACG  HT++V S G +YT+G+  YG+LGH   +D  VP+++       + 
Sbjct: 219 SVDCDKMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLI- 277

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLRC--MDS 338
              + +S G  +S      G L+ WG  K      GD+  +  P+      + R   +  
Sbjct: 278 ---SQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISC 334

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           G  H   V    +  SWG    G+LG+G    ++S  PK ++ L
Sbjct: 335 GWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNS--PKIIEAL 376



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 3/163 (1%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C   H ++V   G  YT+G ++ GQLGHG+      P  +  LS   I +   G
Sbjct: 224 KMVMVACGWRHTISVSSSGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGG 283

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
             H++ +T  G    +GWNK GQ+G G   +   P  V+    + V   +CG   T+  +
Sbjct: 284 WRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCSPVQVKFPQDQRVVQISCGWRHTI--A 341

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             E  ++ + G    GQLGHG   + N+      L+ +    P
Sbjct: 342 VTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSVDGSAGP 384



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 23/52 (44%), Positives = 29/52 (55%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           D R V   C   H +AV  +   ++WGR   GQLGHGD I R+ P I+  LS
Sbjct: 326 DQRVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALS 377


>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
 gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
          Length = 2660

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 1873 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 1932

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 1933 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 1992

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 1993 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 2038

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  +VKV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 2039 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 2098

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 2099 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 2123

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 2124 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 2166

Query: 406  GERL 409
             ERL
Sbjct: 2167 SERL 2170



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 31/349 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 795  GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 854

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 855  NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 914

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G     +T       
Sbjct: 915  KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 967

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  I  L+G  +V++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 968  -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 1020

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 1021 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 1076

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG--HAQYGELGYGPYGQKSSAMP 375
                   +D+  ++      S  I+WG  +A   E   GP    S+  P
Sbjct: 1077 G------LDAVFVNRVACGSSHSIAWGLPNASTDEEKRGPVPFGSTRDP 1119



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+ D  G+ Y  G    G+LG G       P  +  L
Sbjct: 763  SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 814

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 815  HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 874

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG DN               Q +P+ + 
Sbjct: 875  DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVT 918

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +V+VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 919  ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 978

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 979  VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 1034

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 1035 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 1092

Query: 396  SL 397
            S+
Sbjct: 1093 SI 1094



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D+      WG N++ QLG   G K++   PT    +S+ +      G     +V++DG  
Sbjct: 729  DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 786

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G
Sbjct: 787  YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 844

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR + AL  + I  VACG++H+ A+ S+G
Sbjct: 845  EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 890

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +
Sbjct: 891  ELYTWGLGEYGRLGHGDNATQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 946

Query: 307  YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 947  FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 1006

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 1007 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 1050



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 146/336 (43%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 1800 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 1859

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 1860 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 1917

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G ++  +ACG+ H+ A+ + G+V TWG G
Sbjct: 1918 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 1963

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 1964 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 2021

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G    
Sbjct: 2022 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 2081

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 2082 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 2115


>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
 gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
          Length = 4908

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 4121 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4180

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4181 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4240

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4241 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4286

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  +VKV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4287 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4346

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4347 ----IATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4371

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4372 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4414

Query: 406  GERL 409
             ERL
Sbjct: 4415 SERL 4418



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 3046 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3105

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 3106 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNVTQLKP 3165

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G     +T       
Sbjct: 3166 KLVVALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3218

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  I  L+G  +V++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 3219 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3271

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 3272 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3327

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG 355
                   +D+  ++      S  I+WG
Sbjct: 3328 G------LDAVFVNRVACGSSHSIAWG 3348



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 166/362 (45%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+ D  G+ Y  G    G+LG G       P  +  L
Sbjct: 3014 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3065

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 3066 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3125

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG DN               Q +P+ + 
Sbjct: 3126 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------VTQLKPKLVV 3169

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +V+VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3170 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3229

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3230 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3285

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3286 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3343

Query: 396  SL 397
            S+
Sbjct: 3344 SI 3345



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D+      WG N++ QLG   G K++   PT    +S+ +      G     +V++DG  
Sbjct: 2980 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3037

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G
Sbjct: 3038 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3095

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR + AL  + I  VACG++H+ A+ S+G
Sbjct: 3096 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 3141

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +
Sbjct: 3142 ELYTWGLGEYGRLGHGDNVTQLKPKLVVALAGRRVVQ----VACGSRDAQTLALTEDGAV 3197

Query: 307  YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 3198 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3257

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3258 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3301



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 146/336 (43%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4048 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4107

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 4108 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4165

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G ++  +ACG+ H+ A+ + G+V TWG G
Sbjct: 4166 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4211

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4212 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4269

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G    
Sbjct: 4270 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4329

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 4330 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4363



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/256 (25%), Positives = 113/256 (44%), Gaps = 27/256 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +A  C   H +A+D     Y+WG  E  +LGHGD   R  PT ++ L ++ ++    G S
Sbjct: 616 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 675

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
           ++  +T  GN L +G   + +LG G+  +   P+ V  L    V   A G+     L+  
Sbjct: 676 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 735

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YG+LG+G     N   S   +  E+ PR           + +V  G+ 
Sbjct: 736 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 779

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            ++A+ S+G +Y+WG      LGH    R  +   VPR V   Q   ++     ++    
Sbjct: 780 FSLALSSEGQLYSWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 833

Query: 296 NSSCTAGGGQLYMWGK 311
           +    +  G+++ WG+
Sbjct: 834 HCLALSSSGEVFGWGR 849



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 116/266 (43%), Gaps = 39/266 (14%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-KY 110
           P +    +     C     + +  EG+ YTW      +L   +      P  + E++ + 
Sbjct: 563 PTLSCRFQIKQVACCETQMLILSQEGKLYTW------RLAKPEA----EPLPMEEVAHEV 612

Query: 111 KIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATA 167
            I  AG   GR H + +  + N+ ++G  +  +LG G       P+ +  L    V +  
Sbjct: 613 FISIAGHCEGR-HFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY 671

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
           CG  ++  ++   G ++L  G   Y +LGHG     N+ D S+         P  + AL+
Sbjct: 672 CGCSYSAAITC--GGNLLTWGRGTYARLGHG-----NSDDRSL---------PTLVVALS 715

Query: 228 GETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
              +V VA G+   H++A+ S+G V+ WG G YG+LG+        P  V+       LP
Sbjct: 716 DHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVE------SLP 769

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
               + AGS  S   +  GQLY WGK
Sbjct: 770 RVQRVFAGSQFSLALSSEGQLYSWGK 795



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           EA+P P  +  +A E  + +A  C   H +A+DS    Y+WG G   RLGH +     VP
Sbjct: 599 EAEPLP--MEEVAHEVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 656

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
            ++   +++ V      +  G   S+    GG L  WG+         N DD   P  ++
Sbjct: 657 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 712

Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            LS   +    + SG+ H   + ++    +WG   YG+LG G
Sbjct: 713 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 754


>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
 gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
          Length = 4996

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 4222 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4281

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4282 LNGMSVADIACGSAHSAAITSSGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4341

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4342 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4387

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4388 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4447

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4448 ----IATGSLHCVACSDAGEVYTWG----DNDE--------------------------- 4472

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4473 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4515

Query: 406  GERL 409
             ERL
Sbjct: 4516 SERL 4519



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 164/365 (44%), Gaps = 34/365 (9%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G++  CG       GR    +  N+  P +L  L    ++ VA      H +A+ ++G
Sbjct: 3077 QDGKVFACGE---GTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDG 3133

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  E G+LGHG++   D+P +V  L   KI+    G SH+  ++  G    +G  
Sbjct: 3134 KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLG 3193

Query: 138  KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    +++P  V  L    V   ACG+     L+  E  ++ + G   +G+LG
Sbjct: 3194 EYGRLGHGDNATQLKPKQVTALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3253

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  I  L+G  ++++ CG   ++A+   G V+TWG G
Sbjct: 3254 RG--------------GSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKG 3299

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----L 312
             Y RLGH   +    P+ +   +   V+     ++ G+++       GQ+Y WG      
Sbjct: 3300 DYYRLGHGGDQHVRKPQPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQ 3355

Query: 313  KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG--HAQYGELGYGPYGQK 370
            + +G+ ++  KP + +       +D+  ++      S  I+WG  +A   E   GP    
Sbjct: 3356 QGSGNTFVNKKPALVIG------LDAVFVNRVACGSSHSIAWGLPNASLDEEKRGPVPFG 3409

Query: 371  SSAMP 375
            S+  P
Sbjct: 3410 STRDP 3414



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/362 (27%), Positives = 168/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       ++ G  S   V+ D  G+ +  G    G+LG G       P  +  L
Sbjct: 3058 SRLRPI------HISGGSKSLFIVSQD--GKVFACGEGTNGRLGLGVTHNVPLPHQLPVL 3109

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 3110 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3169

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P+ + 
Sbjct: 3170 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNATQL------KPKQVT 3213

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +++VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3214 ALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3273

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3274 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3329

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3330 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3387

Query: 396  SL 397
            S+
Sbjct: 3388 SI 3389



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 156/351 (44%), Gaps = 40/351 (11%)

Query: 71   VAVDVEGRC--YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
            VA + E  C    WG N++ QLG   G K++   PT    +S+ +      G     +V+
Sbjct: 3019 VAAEQELPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHISGGSKSLFIVS 3076

Query: 127  EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGAS 183
            +DG   A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  
Sbjct: 3077 QDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-K 3134

Query: 184  ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
            + + G  + G+LGHG     +              +PR + AL  + I  VACG++H+ A
Sbjct: 3135 VFSWGEGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAA 3180

Query: 244  VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA-- 301
            + S+G +YTWG G YGRLGH +   +  P++V       V+     ++ GS ++   A  
Sbjct: 3181 ISSQGELYTWGLGEYGRLGHGDNATQLKPKQVTALAGRRVIQ----VACGSRDAQTLALT 3236

Query: 302  GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SW 354
              G ++ W     GKL   G +    P  +  LSG  +  ++ G         +  + +W
Sbjct: 3237 EDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTW 3296

Query: 355  GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G   Y  LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3297 GKGDYYRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3345



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 145/332 (43%), Gaps = 30/332 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4149 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4208

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 4209 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4266

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G ++  +ACG+ H+ A+ S G+V TWG G
Sbjct: 4267 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITSSGHVLTWGKG 4312

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4313 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4370

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G    
Sbjct: 4371 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4430

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                 PKKV  L+G  +IS+A G  H +   D
Sbjct: 4431 VRR--PKKVAALQGKKIISIATGSLHCVACSD 4460



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 118/272 (43%), Gaps = 28/272 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +  L    I  +A  C   H +A+D     Y+WG  E  +LGHGD   R  PT +
Sbjct: 602 LEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAGEDHRLGHGDTHARAVPTKI 661

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           S L +  +K    G S++  +T  GN   +G   +G+LG G+  ++  P+ V  L   E+
Sbjct: 662 SALDRC-VKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEI 720

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A G+     L       +   G   YG+LG+G     N   S   +  E  PR    
Sbjct: 721 IDVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNG-----NCNSSLQPILVETLPR---- 771

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW----VPRRVDVFQ 279
                  + ++  G   ++A+ ++G++Y+WG      LGH++ +       VPR V   Q
Sbjct: 772 -------VQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPRLVSSLQ 822

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              ++     ++ G  +       G+++ WG+
Sbjct: 823 HKRLVD----VAVGVAHCLALTSCGEVFGWGR 850



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 131/287 (45%), Gaps = 41/287 (14%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-- 115
           ++ V  GC   +  A+   G  YTWGR   G+LGHG+   +  P IV  L++Y+I     
Sbjct: 668 VKAVFCGC--SYSAAITWSGNLYTWGRGTYGRLGHGNSDDQCVPAIVMALAEYEIIDVAL 725

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
           G+G +H++ +T +G   A+G   +G+LG+G+  + ++P  V  L   V     GA  ++ 
Sbjct: 726 GSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNSSLQPILVETL-PRVQRIFAGAQSSMA 784

Query: 176 LSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           L++ EG       L  +G+   LGH    E + +  SV         PR +++L  + +V
Sbjct: 785 LTT-EGH------LYSWGKASCLGH-QQVERSVQGCSV---------PRLVSSLQHKRLV 827

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
            VA G  H +A+ S G V+ WG         R    +  P  V  +   R  +L     +
Sbjct: 828 DVAVGVAHCLALTSCGEVFGWG---------RNDSQQICPSSVSCEPLLRLPILVGLPTL 878

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
            A  +  +CTA   Q  +W +    G     P  ++DL     R +D
Sbjct: 879 PASGI--ACTA--SQSLIWTQSSQQGLPLRAPF-VIDLGEPTFRLLD 920



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 110/270 (40%), Gaps = 34/270 (12%)

Query: 148 RNEIEPSPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           + E+EP P+  L  E     A  C     + + S   A    AG  +  +LGHG  +   
Sbjct: 599 KPELEPQPIEELAQETILSIAGHCEGRHFLAIDSNRNAYSWGAG--EDHRLGHGDTH--- 653

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
                      A+  P  I+AL    +  V CG +++ A+   G +YTWG G YGRLGH 
Sbjct: 654 -----------ARAVPTKISAL-DRCVKAVFCGCSYSAAITWSGNLYTWGRGTYGRLGHG 701

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW 319
              D+ VP  V       ++  +  + +G  +S C    G +Y W     GKL N   + 
Sbjct: 702 NSDDQCVPAIVMALAEYEII--DVALGSGDAHSLCLTSEGLVYAWGDGDYGKLGNGNCNS 759

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQ--KSSAMPKK 377
                L++      R          +  +    SWG A    LG+    +  +  ++P+ 
Sbjct: 760 SLQPILVETLPRVQRIFAGAQSSMALTTEGHLYSWGKASC--LGHQQVERSVQGCSVPRL 817

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           V  L+   ++ VA G  H L +   T+ GE
Sbjct: 818 VSSLQHKRLVDVAVGVAHCLAL---TSCGE 844


>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
 gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
          Length = 1187

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 156/355 (43%), Gaps = 70/355 (19%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SPT L  +  V I+ VA      HC+A+  EG  ++WG  E G+LGHG++   DRP ++ 
Sbjct: 377 SPTLLESIQHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAEDGKLGHGNRNSCDRPRVIE 436

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 437 SLRGKEVVDIAAGGAHSACITSTGELFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVRVI 496

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG+     L   +  S+ + G   YG+LG G  +                  P+ + 
Sbjct: 497 DVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKI--------------PQKVE 542

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           AL G+ +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q  NV+
Sbjct: 543 ALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKNVI 602

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
                I+ GS++  C A                                 C D G +   
Sbjct: 603 S----IATGSLH--CVA---------------------------------CTDQGEV--- 620

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK--VDILEGMHVISVACGYGHSL 397
                   +WG    G+LG G     +SA+P+   V  L+G  +  VACG  HSL
Sbjct: 621 -------FTWGDNDEGQLGDG----STSAIPRPRLVAALQGKKINRVACGSAHSL 664



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 147/336 (43%), Gaps = 30/336 (8%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G+ + WG N RGQLG  +  +   PT    L+  +  +   G      V   G       
Sbjct: 308 GQIWGWGHNHRGQLGGVEGAKVKLPTPCDALAALRPVQLIGGEQTLFAVYATGYGAG--- 364

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            + G  G+ S+ +      ++ +  +  A   G    + LSS EG  + + G  + G+LG
Sbjct: 365 GRLGIGGTESVSSPTLLESIQHVHIKKVAVNSGGKHCLALSS-EG-EVFSWGEAEDGKLG 422

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           HG  N  +              RPR I +L G+ +V +A G  H+  + S G ++TWG G
Sbjct: 423 HGNRNSCD--------------RPRVIESLRGKEVVDIAAGGAHSACITSTGELFTWGKG 468

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----K 311
            YGRLGH + +D+  P+ V+  +   V+  +    +G   + C      ++ WG     K
Sbjct: 469 RYGRLGHGDSEDQMKPKLVEALKGVRVI--DVACGSGDAQTLCITDDDSVWSWGDGDYGK 526

Query: 312 LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
           L   G D    P+ +  L G  +  ++ G+        S C+ +WG   Y  LG+G    
Sbjct: 527 LGRGGSDGCKIPQKVEALIGQGVVKVECGSQFSVALTKSGCVYTWGKGDYHRLGHG--SD 584

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                P+KV  L+G +VIS+A G  H +   D+  V
Sbjct: 585 DHVRRPRKVAALQGKNVISIATGSLHCVACTDQGEV 620


>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
 gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            2
 gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
          Length = 4912

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 4125 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4184

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4185 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4244

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4245 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4290

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  +VKV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4291 LAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII- 4349

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4350 ---SIATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4375

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4376 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4418

Query: 406  GERL 409
             ERL
Sbjct: 4419 SERL 4422



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 159/349 (45%), Gaps = 31/349 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 3049 GRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3108

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 3109 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 3168

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G     +T       
Sbjct: 3169 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3221

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  I  L+G  +V++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 3222 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3274

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 3275 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3330

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG--HAQYGELGYGPYGQKSSAMP 375
                   +D+  ++      S  I+WG  +A   E   GP    S+  P
Sbjct: 3331 G------LDAVFVNRVACGSSHSIAWGLPNASSDEEKRGPVPFSSTRDP 3373



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+ D  G+ Y  G    G+LG G       P  +  L
Sbjct: 3017 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3068

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 3069 RQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3128

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P+ + 
Sbjct: 3129 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNTTQL------KPKLVT 3172

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +V+VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3173 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3232

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3233 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3288

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3289 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3346

Query: 396  SL 397
            S+
Sbjct: 3347 SI 3348



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D+      WG N++ QLG   G K++   PT    +S+ +      G     +V++DG  
Sbjct: 2983 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 3040

Query: 132  LAFGWNKHGQLGSGSIRNEIEPS--PV-RCLVSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P   PV R  V +  A   G    + L +++G  + + G
Sbjct: 3041 YACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3098

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR + AL  + I  VACG++H+ A+ S+G
Sbjct: 3099 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 3144

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +
Sbjct: 3145 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 3200

Query: 307  YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 3201 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3260

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3261 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 3304



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 146/336 (43%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4052 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4111

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 4112 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4169

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G ++  +ACG+ H+ A+ + G+V TWG G
Sbjct: 4170 HGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKG 4215

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4216 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4273

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G    
Sbjct: 4274 LGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4333

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 4334 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4367



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +A  C   H +A+D     Y+WG  E  +LGHGD   R  PT ++ L ++ ++    G S
Sbjct: 619 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 678

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
           ++  +T  GN L +G   + +LG G+  +   P+ V  L    V   A G+     L+  
Sbjct: 679 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 738

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YG+LG+G     N   S   +  E+ PR           + +V  G+ 
Sbjct: 739 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 782

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            +VA+ S+G +YTWG      LGH    R  +   VPR V   Q   ++     ++    
Sbjct: 783 FSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 836

Query: 296 NSSCTAGGGQLYMWGK 311
           +    +  G+++ WG+
Sbjct: 837 HCLALSSSGEVFGWGR 852



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           EA+P P  +  +A +  + +A  C   H +A+DS    Y+WG G   RLGH +     VP
Sbjct: 602 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 659

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
            ++   +++ V      +  G   S+    GG L  WG+         N DD   P  ++
Sbjct: 660 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 715

Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            LS   +    + SG+ H   + ++    +WG   YG+LG G
Sbjct: 716 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 757


>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
 gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
          Length = 5087

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 159/364 (43%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 4300 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRVSYDRPKLVEH 4359

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L    +     G +H+  +T  G  L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4360 LHGMSVADIACGSAHSAAITASGQVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4419

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4420 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4465

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4466 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII- 4524

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4525 ---SIATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4550

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4551 --------------GQLGDGTV--TAIQRPRLVSALQGKHIVKVTCGSAHTLAL-STSQL 4593

Query: 406  GERL 409
             ERL
Sbjct: 4594 SERL 4597



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 146/318 (45%), Gaps = 29/318 (9%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG++   D+P 
Sbjct: 3146 NVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPR 3205

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
             V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P  V  L   
Sbjct: 3206 QVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALAGR 3265

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             V   ACG+     L+  E  ++ + G   +G+LG G     +T              P 
Sbjct: 3266 RVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT--------------PH 3311

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I  L+G  ++++ CG   ++A+   G V+TWG G Y RLGH   +    P+ +   +  
Sbjct: 3312 EIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGR 3371

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMD 337
             V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +       +D
Sbjct: 3372 RVI----HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTFVNKKPALVIG------LD 3421

Query: 338  SGNMHHFVGADSSCISWG 355
               ++      S  I+WG
Sbjct: 3422 DVFVNRVACGSSHSIAWG 3439



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 105/362 (29%), Positives = 169/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+   EGR +  G    G+LG G       P  +  L
Sbjct: 3105 SRLRPI------HIAGGSKSLFIVSQ--EGRVFACGEGTNGRLGLGVTYNVPLPHQLPVL 3156

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 3157 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEALRAKKIR 3216

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P+ +A
Sbjct: 3217 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNATQL------KPKLVA 3260

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +V+VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3261 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3320

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3321 VI----QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 3376

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     DS  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3377 AVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDDVFVNRVACGSSH 3434

Query: 396  SL 397
            S+
Sbjct: 3435 SI 3436



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D+      WG N++ QLG   G K++   PT    +S+ +      G     +V+++G  
Sbjct: 3071 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQEGRV 3128

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G
Sbjct: 3129 FACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3186

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR + AL  + I  VACG++H+ A+ S+G
Sbjct: 3187 EGEDGKLGHGNRTTLD--------------KPRQVEALRAKKIRDVACGSSHSAAISSQG 3232

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +
Sbjct: 3233 ELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVV----QVACGSRDAQTLALTEDGAV 3288

Query: 307  YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 3289 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDY 3348

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3349 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDSGQV 3392



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 145/336 (43%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4227 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4286

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 4287 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4344

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G ++  +ACG+ H+ A+ + G V TWG G
Sbjct: 4345 HGNRVSYD--------------RPKLVEHLHGMSVADIACGSAHSAAITASGQVLTWGKG 4390

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4391 RYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4448

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G    
Sbjct: 4449 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4508

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 4509 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4542



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 116/256 (45%), Gaps = 27/256 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +A  C   H +A+D     Y+WG  E  +LGHGD   R  PT ++ L ++ ++    G +
Sbjct: 634 IAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVPTKIAALEQHCVQSVFCGCT 693

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
           ++ V+T  GN L +G   + +LG G+  +   P+ V  L    V   A G+     L+  
Sbjct: 694 YSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVAALAEHTVVDVALGSGDAHSLALT 753

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YG+LG+G     N   S   +  E+ PR           + ++  G+ 
Sbjct: 754 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRIFAGSQ 797

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           ++VA+ S+G VYTWG      LGH    R  +   VPR V   Q   ++     ++ G  
Sbjct: 798 YSVALSSEGQVYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----MAVGVA 851

Query: 296 NSSCTAGGGQLYMWGK 311
           +    +  G+++ WG+
Sbjct: 852 HCLALSSSGEVFGWGR 867



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 17/162 (10%)

Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           EA+P+P  +     ET + +A  C   H +A+DS    Y+WG G   RLGH +     VP
Sbjct: 617 EAEPQP--LEEAGHETFISIAGHCEGRHFMAIDSNHNAYSWGAGEDHRLGHGDTHARAVP 674

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
            ++   +++ V      +  G   S+    GG L  WG+         N DD   P  + 
Sbjct: 675 TKIAALEQHCV----QSVFCGCTYSAVITCGGNLLTWGRGTYARLGHGNSDDRCLPTLVA 730

Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            L+   +    + SG+ H   + ++    +WG   YG+LG G
Sbjct: 731 ALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 772



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT +  L    +  VA G    H +A+  EG  + WG  + G+LG+G+     +P +V  
Sbjct: 726 PTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNCNGSLQPILVES 785

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
           L   ++++  AG  ++V ++ +G    + W K   LG   +   ++   V  LVS +
Sbjct: 786 LP--RVQRIFAGSQYSVALSSEGQ--VYTWGKATCLGHQLVERSVQGCSVPRLVSSL 838


>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 4628

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 159/353 (45%), Gaps = 49/353 (13%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3832 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3891

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 3892 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 3951

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +   + + G   YG+LG G  +   T              P  I 
Sbjct: 3952 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKT--------------PMKID 3997

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  ++KV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3998 SLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4057

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
                 I+ GS++  C    G++ ++         W  P+       W+L     G ++  
Sbjct: 4058 ----AIATGSLHCVCCTEDGRIKVF--------QWGLPR-------WSLGL---GEVY-- 4093

Query: 345  VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                    +WG    G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4094 --------TWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 2782 GKIYACGEATNGRLGL--GLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 2839

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G   ++G  ++
Sbjct: 2840 FSWGEGDDGKLGHFSRMNCDKPRLIEALKAKRIRDIACGSSHSAAITSSGELYSWGLGEY 2899

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    ++ P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2900 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2959

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2960 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3005

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3006 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3053



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 169/374 (45%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2744 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRLGLGLSS 2801

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 2802 GTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 2861

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     + + GL +YG+LGHG +            
Sbjct: 2862 RLIEALKAKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHGDNT----------- 2908

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q RP+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2909 ---TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2965

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP M
Sbjct: 2966 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQM 3021

Query: 327  --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
               L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3022 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3079

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3080 QKITRVACGSSHSV 3093



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3757 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3816

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +     A   G    + LSS EG  + + G  + G
Sbjct: 3817 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3874

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 3875 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 3920

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ VD  Q + V+  +    +G   + C      ++ W    
Sbjct: 3921 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 3978

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3979 YGKLGRGGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4037

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4038 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4065



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 144/323 (44%), Gaps = 35/323 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L    +  +AA     H +A+   G  ++WG  + G+LGHGD    + PT++
Sbjct: 445 LAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMI 504

Query: 105 SELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           +  +  +  K       G +++  +T DG    +G   +G+LG GS  ++  P  V  L 
Sbjct: 505 AAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALK 564

Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   ACG+     L+  E   + + G   YG+LG G  +   T              
Sbjct: 565 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 610

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +  L    IVKV CG+  +VA+   G VYTWG G   RLGH   +    P+ +D  Q
Sbjct: 611 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQ 670

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---KLKNNGDDWMY-----PKPLMDLSGW 331
              V+     ++ GS +       G+++ WG   KL++   D ++     PK L  L+  
Sbjct: 671 GKKVVD----VAVGSTHCLALTDDGEVHSWGSNDKLQHF--DTLFSNKKQPKALPGLNSK 724

Query: 332 NLRCMDSGNMHHFVGADSSCISW 354
           ++  +  G    F  A SSC  W
Sbjct: 725 HIVGISCGPGQSF--AWSSCSEW 745



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2728 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 2785

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            A G   +G+LG    SG+I    + + +   V +  A   G    + L +V+G  + + G
Sbjct: 2786 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 2843

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 2844 EGDDGKLGHFSRMNCD--------------KPRLIEALKAKRIRDIACGSSHSAAITSSG 2889

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +Y+WG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 2890 ELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 2945

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 2946 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3005

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3006 FRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3049



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/313 (27%), Positives = 134/313 (42%), Gaps = 38/313 (12%)

Query: 101 PTIVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           P ++  LS  K+ K  A     H + ++ +G   ++G    G+LG G      EP+ +  
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAA 506

Query: 159 LV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
                    V   ACG+ ++  ++ V+G  +   G   YG+LGHG+              
Sbjct: 507 FNGKQAGKHVVHIACGSTYSAAIT-VDG-ELYTWGRGNYGRLGHGSS------------- 551

Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
            E Q  P  + AL G  +V VACG+    T+AV   G V++WG G YG+LG         
Sbjct: 552 -EDQTTPMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 610

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDD--WMYPKPL 325
           P+ V+  Q  +++     +  GS  S      GQ+Y WGK  N    +G D    +PK L
Sbjct: 611 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLL 666

Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
             L G  +  +  G+ H     D   + SWG     +     +  K    PK +  L   
Sbjct: 667 DTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQ--PKALPGLNSK 724

Query: 385 HVISVACGYGHSL 397
           H++ ++CG G S 
Sbjct: 725 HIVGISCGPGQSF 737



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 29/220 (13%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG D  Y  +             P  IAA     AG+ +V +ACG+ ++ A+   G
Sbjct: 488 GRLGHG-DTTYLEE-------------PTMIAAFNGKQAGKHVVHIACGSTYSAAITVDG 533

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +D+  P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 534 ELYTWGRGNYGRLGHGSSEDQTTPMLVTALKGLKVV--DVACGSGDAQTLAVTENGQVWS 591

Query: 309 W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           W     GKL   G D    PK +  L   ++  +  G+     +  D    +WG      
Sbjct: 592 WGDGDYGKLGRGGSDGCKTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQR 651

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           LG+G    +    PK +D L+G  V+ VA G  H L + D
Sbjct: 652 LGHG--TDEHVRFPKLLDTLQGKKVVDVAVGSTHCLALTD 689



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3755 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 3814

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3815 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL 3859

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 3860 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD----IAAGGAHSACITASG 3915

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
            +L+ WGK +       + +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3916 ELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGH--RVIDVACGSGDAQTLCLTDDDMVWS 3973

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G      P K+D L G+ VI V CG   S+ + 
Sbjct: 3974 WGDGDYGKLGRG--GSDGCKTPMKIDSLTGLGVIKVECGSQFSVALT 4018



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 106/255 (41%), Gaps = 62/255 (24%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L GV++  +AAG    H   +   G  +TWG+   G+LGHGD   + +P +V  
Sbjct: 3887 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 3944

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 3945 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTGLGV 4004

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4005 IKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4062

Query: 205  -------TKDSSVKLAYEAQPR-----------------------------PRAIAALAG 228
                   T+D  +K+     PR                             PR +AAL G
Sbjct: 4063 SLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQG 4122

Query: 229  ETIVKVACGTNHTVA 243
            + I +VACG+ HT++
Sbjct: 4123 KKINRVACGSAHTLS 4137



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  Y+WG  E G+LGHGD   + RP 
Sbjct: 2857 NCDKPRLIEALKAKRIRDIA--CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK 2914

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2915 LVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2974

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 2975 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVH 3032

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3033 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3092

Query: 242  VA 243
            VA
Sbjct: 3093 VA 3094



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 17/194 (8%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P  I +L+   +VK+A   +  H +A+ S G V++WG G  GRLGH +      P  +  
Sbjct: 447 PMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPTMIAA 506

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
           F           I+ GS  S+     G+LY WG+         + +D   P  +  L G 
Sbjct: 507 FNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALKG- 565

Query: 332 NLRCMD----SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
            L+ +D    SG+       ++  + SWG   YG+LG G  G      PK V+ L+ + +
Sbjct: 566 -LKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDI 622

Query: 387 ISVACGYGHSLVIV 400
           + V CG   S+ + 
Sbjct: 623 VKVCCGSQFSVALT 636



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE   M+    GK+ G  +  + CGST   A+              GR       +  +P
Sbjct: 498 LEEPTMIAAFNGKQAGKHVVHIACGSTYSAAITVDGELYTWGRGNYGRLGHGSSEDQTTP 557

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P +V +L
Sbjct: 558 MLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 617

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               I K   G   +V +T+DG    +G   + +LG G+  +      VR          
Sbjct: 618 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH------VR---------- 661

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA-----YEAQPRPRA 222
               F   L +++G  +++  +     L    D E ++  S+ KL      +  + +P+A
Sbjct: 662 ----FPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLFSNKKQPKA 717

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV ++CG   + A
Sbjct: 718 LPGLNSKHIVGISCGPGQSFA 738



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3013 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3070

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3071 PTLVQGLEGQKITRVACGSSHSVAWT 3096



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 15/98 (15%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE---------------GRCYTWGRN 85
            D ++  P +++ L G  +  +A G + C C   D                 G  YTWG N
Sbjct: 4039 DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDN 4098

Query: 86   ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            + GQLG G      RP +V+ L   KI +   G +HT+
Sbjct: 4099 DEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTL 4136



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALA---TLRPVQLIGGEQTLFAVT 3806

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    +R   ++SG  H   + ++   
Sbjct: 3807 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3865

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 3866 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 3912


>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 440

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 172/358 (48%), Gaps = 35/358 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L   +I     
Sbjct: 15  VLLISAG--ASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT+  +E  N L ++GW   G+LG G+  + + P P+  L    +   ACG D    
Sbjct: 73  GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACG-DSHCL 131

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG GT     ++DS V         P+ I    G  I  VA
Sbjct: 132 AVTMEG-EVQSWGRNQNGQLGLGT-----SEDSLV---------PQKIQTFQGVPIKMVA 176

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H+VA+   G +Y WG+G YG LG  ++ D W+P +V     + ++    +++ G  
Sbjct: 177 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMV----MVACGWR 232

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           ++   +  G LY +G  K       N +D + P+ L  LS   L    SG   H +   S
Sbjct: 233 HTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSD-KLISQVSGGWRHSMALTS 291

Query: 350 SCI--SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + +   WG  ++G++G G    + S  P +V       V+ ++CG+ H++ + ++ NV
Sbjct: 292 TGLLYGWGWNKFGQVGVGDNVDRCS--PVQVKFPHDQKVVQISCGWRHTIAVTEKENV 347



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L+ P  +  L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 92  WGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 149

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       IK   AG  H+V +TE+G    +GW ++G LG G   +
Sbjct: 150 LGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 209

Query: 150 EIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +   ++   ACG   T+ +SS+ G  +   G  +YGQLGHG     N +DS
Sbjct: 210 RWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHG-----NFEDS 262

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            V         P+ + AL+ + I +V+ G  H++A+ S G +Y WG+  +G++G  +  D
Sbjct: 263 LV---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVD 313

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P +V       V+     IS G  ++        ++ WG+  N
Sbjct: 314 RCSPVQVKFPHDQKVVQ----ISCGWRHTIAVTEKENVFSWGRGTN 355



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 3/163 (1%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C   H ++V   G  YT+G ++ GQLGHG+      P  +  LS   I +   G
Sbjct: 223 KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGG 282

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
             H++ +T  G    +GWNK GQ+G G   +   P  V+    + V   +CG   T+  +
Sbjct: 283 WRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI--A 340

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             E  ++ + G    GQLGHG   + N+      L+ +    P
Sbjct: 341 VTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGSSGP 383



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 58/122 (47%), Gaps = 3/122 (2%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  + +LV P +L+ L    I  V+ G    H +A+   G  Y WG N+ GQ+G GD + 
Sbjct: 257 GNFEDSLV-PQKLQALSDKLISQVSGGWR--HSMALTSTGLLYGWGWNKFGQVGVGDNVD 313

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V      K+ +   G  HT+ VTE  N  ++G   +GQLG G   +   P  + 
Sbjct: 314 RCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373

Query: 158 CL 159
            L
Sbjct: 374 AL 375


>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
          Length = 440

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 172/358 (48%), Gaps = 35/358 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L   +I     
Sbjct: 15  VLLISAG--ASHTVALLSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALDAQQIDSIAC 72

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT+  +E  N L ++GW   G+LG G+  + + P P+  L    +   ACG D    
Sbjct: 73  GADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIACG-DSHCL 131

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG GT     ++DS V         P+ I    G  I  VA
Sbjct: 132 AVTMEG-EVQSWGRNQNGQLGLGT-----SEDSLV---------PQKIQTFQGVPIKMVA 176

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H+VA+   G +Y WG+G YG LG  ++ D W+P +V     + ++    +++ G  
Sbjct: 177 AGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDKMV----MVACGWR 232

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           ++   +  G LY +G  K       N +D + P+ L  LS   L    SG   H +   S
Sbjct: 233 HTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSD-KLISQVSGGWRHSMALTS 291

Query: 350 SCI--SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + +   WG  ++G++G G    + S  P +V       V+ ++CG+ H++ + ++ NV
Sbjct: 292 TGLLYGWGWNKFGQVGVGDNVDRCS--PVQVKFPHDQKVVQISCGWRHTIAVTEKENV 347



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L+ P  +  L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 92  WGDFGRLGHGNSSDLLIPQPIIALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 149

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       IK   AG  H+V +TE+G    +GW ++G LG G   +
Sbjct: 150 LGLGTSEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 209

Query: 150 EIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +   ++   ACG   T+ +SS+ G  +   G  +YGQLGHG     N +DS
Sbjct: 210 RWIPEKVSSVDCDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHG-----NFEDS 262

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            V         P+ + AL+ + I +V+ G  H++A+ S G +Y WG+  +G++G  +  D
Sbjct: 263 LV---------PQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNVD 313

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P +V       V+     IS G  ++        ++ WG+  N
Sbjct: 314 RCSPVQVKFPHDQKVVQ----ISCGWRHTIAVTEKENVFSWGRGTN 355



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 3/163 (1%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C   H ++V   G  YT+G ++ GQLGHG+      P  +  LS   I +   G
Sbjct: 223 KMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGG 282

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
             H++ +T  G    +GWNK GQ+G G   +   P  V+    + V   +CG   T+  +
Sbjct: 283 WRHSMALTSTGLLYGWGWNKFGQVGVGDNVDRCSPVQVKFPHDQKVVQISCGWRHTI--A 340

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             E  ++ + G    GQLGHG   + N+      L+ +    P
Sbjct: 341 VTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVDGSSGP 383



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  + +LV P +L+ L    I  V+ G    H +A+   G  Y WG N+ GQ+G GD + 
Sbjct: 257 GNFEDSLV-PQKLQALSDKLISQVSGGWR--HSMALTSTGLLYGWGWNKFGQVGVGDNVD 313

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V      K+ +   G  HT+ VTE  N  ++G   +GQLG G   +   P  + 
Sbjct: 314 RCSPVQVKFPHDQKVVQISCGWRHTIAVTEKENVFSWGRGTNGQLGHGDTVDRNSPKIIE 373

Query: 158 CL-VSEVTATACGADFTVWLSSVEGASIL 185
            L V   +     +  T  LS   GAS+ 
Sbjct: 374 ALSVDGSSGPHIESSNTDLLSGKSGASLF 402


>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2353

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 132/264 (50%), Gaps = 15/264 (5%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC---YTWGRNERGQLGHGDKIQRDRPTI 103
           P  +R L    +R V+  C   H V    +G     YT+GRN+ GQLGH D I R  P  
Sbjct: 691 PKIIRSLENKIVRLVS--CSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQF 748

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVS 161
           V  LS  +I     G+ HT+VVT  G + AFG N +GQLG  ++ N++ P  VR      
Sbjct: 749 VEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQ 808

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           E     CG   T+ L S  GA +   G   YGQLG G  N  +T  S+++L  +     R
Sbjct: 809 ECLEIRCGYYHTIALCS--GAHLFAFGRNDYGQLGLGRSNASST--SNLQLQQQRFSNAR 864

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I  L G+ IV++ACG  HT+AV   G +Y +G   +G+LG  +  +   P  +D F   
Sbjct: 865 LIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGK 924

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQ 305
            V    A+++AG  ++    GG +
Sbjct: 925 RV----ALVAAGFYHTVVLTGGKE 944



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 152/352 (43%), Gaps = 49/352 (13%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           E   ++ G+N  G+LGHGD   R     +  L + +I + GAG  HTVV+T DG     G
Sbjct: 561 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 620

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC--GADFTVWLSSVEGASILNAGLPQYG 193
           +N +GQ G G        S +  + S  +      G + T+ +S+     +   G    G
Sbjct: 621 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVST--DGRVATCGYNYRG 678

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG---YV 250
           QLGHG     NT   SV         P+ I +L  + +  V+C   HTV     G    +
Sbjct: 679 QLGHG-----NTTSESV---------PKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNL 724

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           YT+G   YG+LGH +  D  +P+ V+      ++     ++ G  ++      G+ + +G
Sbjct: 725 YTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVS----VACGQYHTMVVTASGKAFAFG 780

Query: 311 K--LKNNGDDWMYPK--PLMDLSG------WNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
           K      G D M  +  P+    G        +RC   G  H   + + +   ++G   Y
Sbjct: 781 KNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRC---GYYHTIALCSGAHLFAFGRNDY 837

Query: 360 GELGYG----------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           G+LG G             Q+  +  + +D LEG  ++ +ACG  H++ + D
Sbjct: 838 GQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSD 889



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 57/381 (14%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           R++ L   +I  + AG  + H V +  +G+ +T G N+ GQ G G   +      VS LS
Sbjct: 588 RIQALQQKEIIQIGAG--NEHTVVLTADGKVFTCGYNDNGQCGQGGTAR------VSHLS 639

Query: 109 KYKIKKAGAGRS-------HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
           +     +G+ ++       HT++V+ DG     G+N  GQLG G+  +E  P  +R L +
Sbjct: 640 EIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLEN 699

Query: 162 EVTATACGADFTVWLSSVEG--ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++      + +   L+  +G   ++   G   YGQLGH      ++ D  +         
Sbjct: 700 KIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN-----DSIDRKI--------- 745

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VF 278
           P+ + AL+ + IV VACG  HT+ V + G  + +G   YG+LG    +++  P +V    
Sbjct: 746 PQFVEALSDQQIVSVACGQYHTMVVTASGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGL 805

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------------------LKNNGDDWM 320
           +R   L     I  G  ++     G  L+ +G+                  L+     + 
Sbjct: 806 ERQECLE----IRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFS 861

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             + + +L G ++  +  G  H    +D+  +  +G   +G+LG G   ++    P  +D
Sbjct: 862 NARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP--ID 919

Query: 380 ILEGMHVISVACGYGHSLVIV 400
              G  V  VA G+ H++V+ 
Sbjct: 920 DFVGKRVALVAAGFYHTVVLT 940



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 16/165 (9%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++ G   YG LGH +        R+   Q+  ++     I AG+ ++      G+++  
Sbjct: 564 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQ----IGAGNEHTVVLTADGKVFTC 619

Query: 310 GKLKNNGD---------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           G   +NG            +   P MD         +       V  D    + G+   G
Sbjct: 620 G-YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 678

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +LG+G     S ++PK +  LE   V  V+C Y H+++  +  N+
Sbjct: 679 QLGHG--NTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNL 721


>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 107/352 (30%), Positives = 165/352 (46%), Gaps = 33/352 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       TWGR E GQLGHGD   R  PT++S      I     
Sbjct: 16  VVLVSAG--ASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAPGITSVIC 73

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +ED + + ++GW   G+LG G+  +   P PV+ L   ++   ACG      
Sbjct: 74  GADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHC-- 131

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      +L+ G  Q GQLG GT     T+DS +         P+ I A  G ++  +A
Sbjct: 132 LAVTMAGEVLSWGRNQNGQLGLGT-----TEDSLL---------PQTIQAFEGISVKMIA 177

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D +VP +V   + + ++    +++ G  
Sbjct: 178 AGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDKMV----LVACGWR 233

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  +  L   +   +  G  H   + +D
Sbjct: 234 HTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSSTSQISGGWRHTMALTSD 293

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                WG  ++G++G G      S  P +V+  E   V  VACG+ H+L   
Sbjct: 294 GKLYGWGWNKFGQVGAGDNADHCS--PAQVNFPEEQKVAQVACGWRHTLAFT 343



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 119/255 (46%), Gaps = 19/255 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 93  WGDFGRLGHGNSTDVFTPQPVKALQGIKIKQLA--CGDSHCLAVTMAGEVLSWGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 151 LGLGTTEDSLLPQTIQAFEGISVKMIAAGAEHTAAVTEDGDIYGWGWGRYGNLGLGDRND 210

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +  + +   ACG   T+ +SS    S+   G  +YGQLGHG          
Sbjct: 211 RFVPEKVSSVEGDKMVLVACGWRHTITVSS--SGSLYTYGWSKYGQLGHGD--------- 259

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   +  +++ G  HT+A+ S G +Y WG+  +G++G  +  D
Sbjct: 260 -----FEDHLVPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNAD 314

Query: 269 EWVPRRVDVFQRNNV 283
              P +V+  +   V
Sbjct: 315 HCSPAQVNFPEEQKV 329



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 12/191 (6%)

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           A+A  A   +V V+ G +H+VA+ +   + TWG G  G+LGH + +D  VP  +  F   
Sbjct: 7   AVADEAPPAVVLVSAGASHSVALLAGNVLCTWGRGEDGQLGHGDAEDRLVPTVISGFDAP 66

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRC 335
            +    +VI      ++ +    Q+Y W     G+L + N  D   P+P+  L G  ++ 
Sbjct: 67  GI---TSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPVKALQGIKIKQ 123

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           +  G+ H   V      +SWG  Q G+LG G    + S +P+ +   EG+ V  +A G  
Sbjct: 124 LACGDSHCLAVTMAGEVLSWGRNQNGQLGLGT--TEDSLLPQTIQAFEGISVKMIAAGAE 181

Query: 395 HSLVIVDRTNV 405
           H+  + +  ++
Sbjct: 182 HTAAVTEDGDI 192


>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
 gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
          Length = 5072

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 4312 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4371

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4372 LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAID 4431

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4432 IACGSGDAQTLCINDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4477

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4478 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKII- 4536

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4537 ---SIATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 4562

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4563 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4605

Query: 406  GERL 409
             ERL
Sbjct: 4606 SERL 4609



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 3158 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3217

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 3218 NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKP 3277

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G     +T       
Sbjct: 3278 KLVAALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 3330

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  I  L+G  ++++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 3331 -------PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3383

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 3384 QPIAGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3439

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG 355
                   +D+  ++      S  I+WG
Sbjct: 3440 G------LDAVFVNRVACGSSHSIAWG 3460



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 169/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V  +  G+ Y  G    G+LG G       P  +  L
Sbjct: 3126 SRLRPI------HIAGGSKSLFIVGQN--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3177

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L S+ + 
Sbjct: 3178 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIR 3237

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D+S +L      +P+ +A
Sbjct: 3238 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNSTQL------KPKLVA 3281

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +++VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3282 ALAGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 3341

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3342 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHV 3397

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3398 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3455

Query: 396  SL 397
            S+
Sbjct: 3456 SI 3457



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 159/366 (43%), Gaps = 45/366 (12%)

Query: 61   VAAGCVSCH-----CVAVDVEGRC--YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYK 111
            +A G VS H       A+D +  C    WG N++ QLG   G K++   PT    +S+ +
Sbjct: 3072 MAGGSVSLHGDHGMAGALDQDLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLR 3129

Query: 112  IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATAC 168
                  G     +V ++G   A G   +G+LG G   N   P  +  L   V +  A   
Sbjct: 3130 PIHIAGGSKSLFIVGQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHS 3189

Query: 169  GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
            G    + L +++G  + + G  + G+LGHG     +              +PR +  L  
Sbjct: 3190 GGKHALAL-TLDG-KVFSWGEGEDGKLGHGNRTTLD--------------KPRLVETLRS 3233

Query: 229  ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
            + I  VACG++H+ A+ S+G +YTWG G YGRLGH +   +  P+ V       V+    
Sbjct: 3234 KKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNSTQLKPKLVAALAGRRVI---- 3289

Query: 289  VISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGN 340
             ++ GS ++   A    G ++ W     GKL   G +    P  +  LSG  +  ++ G 
Sbjct: 3290 QVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGA 3349

Query: 341  MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                    +  + +WG   Y  LG+G  G +    P+ +  L G  VI VA G  H L +
Sbjct: 3350 QFSLALTRAGEVWTWGKGDYYRLGHG--GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAV 3407

Query: 400  VDRTNV 405
             D   V
Sbjct: 3408 TDAGQV 3413



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 145/336 (43%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4239 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4298

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 4299 GRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 4356

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G  +  +ACG+ H+ A+ + G+V TWG G
Sbjct: 4357 HGNRMSYD--------------RPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKG 4402

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4403 RYGRLGHGDSEDQLRPQLVEALLGYRAI--DIACGSGDAQTLCINDDDNVWSWGDGDYGK 4460

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G    
Sbjct: 4461 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDH 4520

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 4521 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 4554



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 120/270 (44%), Gaps = 28/270 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L  +    I  +A+ C   H +A+D+    Y+WG  E  +LGHGD   R  PT ++ 
Sbjct: 609 PQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAVPTKITL 668

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
           L +  +K    G S++  +T  GN   +G   + +LG G+  ++  P+ V  L   E+  
Sbjct: 669 LDRC-VKAVFCGCSYSAAITCSGNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIID 727

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G+     L       +   G   YG+LG+G     N   S   +  E+ P+      
Sbjct: 728 VALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG-----NLNGSMSPVLVESLPK------ 776

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR--EQKDEW--VPRRVDVFQRN 281
                + +V  G   ++A+ + G +Y+WG      LGH+  E+  +W  VPR +   Q  
Sbjct: 777 -----VQRVFAGAQFSMALTTDGQLYSWGKASC--LGHQLVERSAQWCSVPRLISGLQHK 829

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            ++     ++     SSC    G+++ WG+
Sbjct: 830 RIVDVAVGVAHCLALSSC----GEVFGWGR 855



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 16/163 (9%)

Query: 214 YEAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
           ++ +  P+ +  +A ETIV +A  C   H +A+D     Y+WG G   RLGH +     V
Sbjct: 603 FKPETEPQLLEEIAHETIVSIASHCEGRHFMAIDINRNAYSWGNGEDHRLGHGDTHARAV 662

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPL 325
           P ++ +  R      +AV    S +++ T  G  LY WG+         N DD   P  +
Sbjct: 663 PTKITLLDRCV----KAVFCGCSYSAAITCSGN-LYTWGRGTYARLGHGNSDDQPLPTVV 717

Query: 326 MDLSGWNL--RCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
           M L+   +    + SG+ H   + ++    +WG A YG+LG G
Sbjct: 718 MALTEHEIIDVALGSGDAHSLCLTSEGHVYAWGDADYGKLGNG 760


>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
          Length = 434

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 166/358 (46%), Gaps = 31/358 (8%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+R  +  C S H +A+   G   +WGR E GQLGHGD  +R +P  +  L +       
Sbjct: 13  DLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASCSAVC 72

Query: 117 AGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
           +G  ++V +++  N + ++GW   G+LG G   +   P P+R L    +   ACG   T 
Sbjct: 73  SGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHT- 131

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+  +   + + G  Q GQLG GT     T D+ +         P+ + +L G+ +  +
Sbjct: 132 -LAVTDTGELFSFGRNQNGQLGLGT-----TSDAIL---------PQPVESLRGQEVTSI 176

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG  H++A  S G V+ WG+G YG LG    +D  +P +V   +   V      ++ G 
Sbjct: 177 ACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKV----TSVACGW 232

Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
            +S      G +Y +G  K     +GD  D + PK +  L    +  +  G  H     D
Sbjct: 233 RHSIAADETGAVYTFGWSKYGQLGHGDCIDQLVPKAVESLKDSRIVLIAGGWRHTSAADD 292

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           S  + SWG  ++G+LG G      S  P  V  L    V  ++CG+ H+  + +  +V
Sbjct: 293 SGKLYSWGWNKFGQLGIG--SNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDV 348



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 143/293 (48%), Gaps = 28/293 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y+WG  + G+LGHGD      P  +  L+   I K   G +HT+ VT+ G   +FG N++
Sbjct: 89  YSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQN 148

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG G+  + I P PV  L   EVT+ ACG + +  L++     +   G  +YG LG G
Sbjct: 149 GQLGLGTTSDAILPQPVESLRGQEVTSIACGGEHS--LAATSAGDVFAWGWGRYGNLGVG 206

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              + +               P  +  L G  +  VACG  H++A D  G VYT+G+  Y
Sbjct: 207 PPEDRHL--------------PSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFGWSKY 252

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
           G+LGH +  D+ VP+ V+  + + ++    +I+ G  ++S     G+LY WG  K     
Sbjct: 253 GQLGHGDCIDQLVPKAVESLKDSRIV----LIAGGWRHTSAADDSGKLYSWGWNKFGQLG 308

Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGY 364
             +  D   P P+  L+   ++ +  G  H F   ++    SWG    G+LG+
Sbjct: 309 IGSNTDSNAPVPVQGLNTSPVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGH 361



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 141/317 (44%), Gaps = 29/317 (9%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++  P  +R L G +I  VA  C   H +AV   G  +++GRN+ GQ
Sbjct: 93  WGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA--CGDTHTLAVTDTGELFSFGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  V  L   ++     G  H++  T  G+  A+GW ++G LG G   +
Sbjct: 151 LGLGTTSDAILPQPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPED 210

Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              PS V  L   +VT+ ACG   ++  ++ E  ++   G  +YGQLGHG     +  D 
Sbjct: 211 RHLPSQVHGLEGVKVTSVACGWRHSI--AADETGAVYTFGWSKYGQLGHG-----DCIDQ 263

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            V         P+A+ +L    IV +A G  HT A D  G +Y+WG+  +G+LG     D
Sbjct: 264 LV---------PKAVESLKDSRIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNTD 314

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDDWMYP 322
              P  V     +    P  ++S G  ++      G ++ WG+        N   D   P
Sbjct: 315 SNAPVPVQGLNTS----PVKLLSCGWRHTFAVTEAGDVFSWGRGVNGQLGHNEPKDTNAP 370

Query: 323 KPLMDLSGWNLRCMDSG 339
             L +LS  +++  D G
Sbjct: 371 VRLAELSMGSIKLEDLG 387



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 144/308 (46%), Gaps = 29/308 (9%)

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
           T  S +S  ++     G SH++ +  +G +L++G  + GQLG G      +P  +  L+ 
Sbjct: 6   TFRSAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQ 65

Query: 162 EVTATAC-GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
              +  C GA+++V LS      + + G   +G+LGHG  N+                 P
Sbjct: 66  ASCSAVCSGAEYSVALSQPRN-EVYSWGWGDFGRLGHGDCNDVFI--------------P 110

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + I ALAG  IVKVACG  HT+AV   G ++++G    G+LG     D  +P+ V+  + 
Sbjct: 111 QPIRALAGRNIVKVACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILPQPVESLRG 170

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLSGWNLR 334
             V      I+ G  +S      G ++   WG+  N G    +D   P  +  L G  + 
Sbjct: 171 QEV----TSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPEDRHLPSQVHGLEGVKVT 226

Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G  H     ++  + ++G ++YG+LG+G    +   +PK V+ L+   ++ +A G+
Sbjct: 227 SVACGWRHSIAADETGAVYTFGWSKYGQLGHGDCIDQ--LVPKAVESLKDSRIVLIAGGW 284

Query: 394 GHSLVIVD 401
            H+    D
Sbjct: 285 RHTSAADD 292



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/257 (28%), Positives = 123/257 (47%), Gaps = 32/257 (12%)

Query: 152 EPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
           E +  R  VS+  VT+ +CG+  +  L+ +     L+ G  + GQLGHG   E       
Sbjct: 3   EATTFRSAVSDLRVTSVSCGSSHS--LALLSNGIALSWGRGEDGQLGHGDAEE------- 53

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS-KGYVYTWGFGGYGRLGHREQKD 268
                  + +PRAI  L   +   V  G  ++VA+   +  VY+WG+G +GRLGH +  D
Sbjct: 54  -------RKKPRAIFHLMQASCSAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCND 106

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYP 322
            ++P+ +      N++     ++ G  ++      G+L+ +G+ +N         D + P
Sbjct: 107 VFIPQPIRALAGRNIVK----VACGDTHTLAVTDTGELFSFGRNQNGQLGLGTTSDAILP 162

Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           +P+  L G  +  +  G  H      +    +WG  +YG LG GP   +   +P +V  L
Sbjct: 163 QPVESLRGQEVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGP--PEDRHLPSQVHGL 220

Query: 382 EGMHVISVACGYGHSLV 398
           EG+ V SVACG+ HS+ 
Sbjct: 221 EGVKVTSVACGWRHSIA 237



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 12/189 (6%)

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           +A++   +  V+CG++H++A+ S G   +WG G  G+LGH + ++   PR +    + + 
Sbjct: 9   SAVSDLRVTSVSCGSSHSLALLSNGIALSWGRGEDGQLGHGDAEERKKPRAIFHLMQASC 68

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMD 337
               AV S    + + +    ++Y W     G+L + + +D   P+P+  L+G N+  + 
Sbjct: 69  ---SAVCSGAEYSVALSQPRNEVYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRNIVKVA 125

Query: 338 SGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            G+ H     D+    S+G  Q G+LG G      + +P+ V+ L G  V S+ACG  HS
Sbjct: 126 CGDTHTLAVTDTGELFSFGRNQNGQLGLGT--TSDAILPQPVESLRGQEVTSIACGGEHS 183

Query: 397 LVIVDRTNV 405
           L      +V
Sbjct: 184 LAATSAGDV 192


>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
 gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
          Length = 4933

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  +G  Y WG  E G+LGHG+++  DRP ++  
Sbjct: 4146 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRLSYDRPKLLEH 4205

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4206 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4265

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4266 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4311

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4312 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4371

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4372 ----IATGSLHCVACSDAGEVYTWG----DNDE--------------------------- 4396

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4397 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4439

Query: 406  GERL 409
             ERL
Sbjct: 4440 SERL 4443



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 32/343 (9%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G++  CG       GR    +  N+  P +L  L    ++ VA      H +A+ ++G
Sbjct: 2962 QDGKVFACGE---GTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDG 3018

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  E G+LGHG++   D+P +V  L   KI+    G SH+  ++  G    +G  
Sbjct: 3019 KVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLG 3078

Query: 138  KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    +++P  V  L  S V   ACG+     L+  E  ++ + G   +G+LG
Sbjct: 3079 EYGRLGHGDNATQLKPKLVTALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLG 3138

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  I  L+G  +V++ CG   ++A+   G V+TWG G
Sbjct: 3139 RG--------------GSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKG 3184

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----L 312
             Y RLGH   +    P+ +   +   V+     ++ G+++       GQ+Y WG      
Sbjct: 3185 DYYRLGHGGDQHVRKPQPIAGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQ 3240

Query: 313  KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
            + +G+ ++  KP + +       +D+  ++      S  ++WG
Sbjct: 3241 QGSGNTFVNKKPALVIG------LDAVFVNRVACGSSHSMAWG 3277



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 165/362 (45%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+ D  G+ +  G    G+LG G       P  +  L
Sbjct: 2943 SRLRPI------HIAGGSKSLFVVSQD--GKVFACGEGTNGRLGLGVTHNVPLPHQLPVL 2994

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 2995 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 3054

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG DN               Q +P+ + 
Sbjct: 3055 DIACGSSHSAAISS--QGELYTWGLGEYGRLGHG-DN-------------ATQLKPKLVT 3098

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            AL G  +++VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3099 ALCGSRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3158

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3159 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHV 3214

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3215 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3272

Query: 396  SL 397
            S+
Sbjct: 3273 SM 3274



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 153/346 (44%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            DV      WG N++ QLG   G K++   PT    +S+ +      G     VV++DG  
Sbjct: 2909 DVPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFVVSQDGKV 2966

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G
Sbjct: 2967 FACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 3024

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR + AL  + I  +ACG++H+ A+ S+G
Sbjct: 3025 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDIACGSSHSAAISSQG 3070

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V     + V+     ++ GS ++   A    G +
Sbjct: 3071 ELYTWGLGEYGRLGHGDNATQLKPKLVTALCGSRVIQ----VACGSRDAQTLALTEDGAV 3126

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 3127 FSWGDGDFGKLGRGGSEGSATPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 3186

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3187 YRLGHG--GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3230



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 144/333 (43%), Gaps = 32/333 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4073 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4132

Query: 140  GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            G+LG G   +   P+ +       V +V   + G      L+      +   G  + G+L
Sbjct: 4133 GRLGVGGSDSWSIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTDGEVYAWGEGEDGKL 4189

Query: 196  GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            GHG            +L+Y+   RP+ +  L G ++  +ACG+ H+ A+ + G+V TWG 
Sbjct: 4190 GHGN-----------RLSYD---RPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGK 4235

Query: 256  GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
            G YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     G
Sbjct: 4236 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 4293

Query: 311  KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
            KL   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G   
Sbjct: 4294 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4353

Query: 369  QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                  PKKV  L+G  +IS+A G  H +   D
Sbjct: 4354 HVRR--PKKVAALQGKKIISIATGSLHCVACSD 4384



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 135/298 (45%), Gaps = 42/298 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT++  LV   ++ V  GC   +  A+ + G  YTWGR   G+LGHG    +  PT+V  
Sbjct: 684 PTKIESLVR-RVKSVYCGC--SYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMA 740

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           L  +++     G+G +HT+ +T +G   A+G   +G+LG+ S  + ++P  + CL   V 
Sbjct: 741 LKDHQVVDVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECL-PRVQ 799

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPR 221
               G+ F++ L+  EG       L  +G+   LGH    E N +  SV         PR
Sbjct: 800 RVFAGSQFSLALTG-EGQ------LYSWGKASCLGHQL-VERNVQGCSV---------PR 842

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQ 279
            I +L  + IV VA G  H +A+ S G ++ WG         R    +  P  V  +   
Sbjct: 843 LITSLQHKRIVDVAVGVTHCLALSSAGEIFGWG---------RNDNQQICPASVCSEPLL 893

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
           R  +L     + A  +  +CTA   Q  +W +    G     P  ++DL     R +D
Sbjct: 894 RQPILVTLPTLPASGM--ACTA--VQSLIWTQSSRQGVPLRAPF-VIDLGEPTFRLLD 946



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 28/260 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +A+ C   H +AVD     Y+WG  +  +LGHGD   R+ PT +  L + ++K    G S
Sbjct: 644 IASHCEGRHFLAVDNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVR-RVKSVYCGCS 702

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
           ++  +T  GN   +G   +G+LG G   ++  P+ V  L   +V   A G+     L   
Sbjct: 703 YSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDAHTLCLT 762

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YG+LG+ + N      S   L  E  PR           + +V  G+ 
Sbjct: 763 NEGLVYAWGDGDYGKLGNASCN-----SSLQPLLIECLPR-----------VQRVFAGSQ 806

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            ++A+  +G +Y+WG      LGH    R  +   VPR +   Q   ++     ++ G  
Sbjct: 807 FSLALTGEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKRIVD----VAVGVT 860

Query: 296 NSSCTAGGGQLYMWGKLKNN 315
           +    +  G+++ WG+  N 
Sbjct: 861 HCLALSSAGEIFGWGRNDNQ 880



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 8/185 (4%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  I +L    +  V CG +++ A+  +G +YTWG G YGRLGH    D+ +P  V   +
Sbjct: 684 PTKIESLV-RRVKSVYCGCSYSAAITLRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALK 742

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLR 334
            + V+  +  + +G  ++ C    G +Y W     GKL N   +      L++      R
Sbjct: 743 DHQVV--DVALGSGDAHTLCLTNEGLVYAWGDGDYGKLGNASCNSSLQPLLIECLPRVQR 800

Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
                     +  +    SWG A            +  ++P+ +  L+   ++ VA G  
Sbjct: 801 VFAGSQFSLALTGEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVDVAVGVT 860

Query: 395 HSLVI 399
           H L +
Sbjct: 861 HCLAL 865


>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 2298

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 132/264 (50%), Gaps = 15/264 (5%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC---YTWGRNERGQLGHGDKIQRDRPTI 103
           P  +R L    +R V+  C   H V    +G     YT+GRN+ GQLGH D I R  P  
Sbjct: 502 PKIIRSLENKIVRLVS--CSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQF 559

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVS 161
           V  LS  +I     G+ HT+VVT  G + AFG N +GQLG  ++ N++ P  VR      
Sbjct: 560 VEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGLERQ 619

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           E     CG   T+ L S  GA +   G   YGQLG G  N  +T  S+++L  +     R
Sbjct: 620 ECLEIRCGYYHTIALCS--GAHLFAFGRNDYGQLGLGRSNASST--SNLQLQQQRFSNAR 675

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I  L G+ IV++ACG  HT+AV   G +Y +G   +G+LG  +  +   P  +D F   
Sbjct: 676 LIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFPIDDFVGK 735

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQ 305
            +    A+++AG  ++    GG +
Sbjct: 736 RI----ALVAAGFYHTVVLTGGKE 755



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 152/352 (43%), Gaps = 49/352 (13%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           E   ++ G+N  G+LGHGD   R     +  L + +I + GAG  HTVV+T DG     G
Sbjct: 372 EREVWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQIGAGNEHTVVLTADGKVFTCG 431

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC--GADFTVWLSSVEGASILNAGLPQYG 193
           +N +GQ G G        S +  + S  +      G + T+ +S+     +   G    G
Sbjct: 432 YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVST--DGRVATCGYNYRG 489

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG---YV 250
           QLGHG     NT   SV         P+ I +L  + +  V+C   HTV     G    +
Sbjct: 490 QLGHG-----NTTSESV---------PKIIRSLENKIVRLVSCSYYHTVLACEDGNLQNL 535

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           YT+G   YG+LGH +  D  +P+ V+      ++     ++ G  ++      G+ + +G
Sbjct: 536 YTFGRNDYGQLGHNDSIDRKIPQFVEALSDQQIVS----VACGQYHTMVVTVSGKAFAFG 591

Query: 311 K--LKNNGDDWMYPK--PLMDLSG------WNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
           K      G D M  +  P+    G        +RC   G  H   + + +   ++G   Y
Sbjct: 592 KNDYGQLGIDTMENQLAPVQVRGGLERQECLEIRC---GYYHTIALCSGAHLFAFGRNDY 648

Query: 360 GELGYG----------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           G+LG G             Q+  +  + +D LEG  ++ +ACG  H++ + D
Sbjct: 649 GQLGLGRSNASSTSNLQLQQQRFSNARLIDELEGKDIVRIACGCYHTIAVSD 700



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 167/380 (43%), Gaps = 57/380 (15%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           R++ L   +I  + AG  + H V +  +G+ +T G N+ GQ G G   +      VS LS
Sbjct: 399 RIQALQQKEIIQIGAG--NEHTVVLTADGKVFTCGYNDNGQCGQGGTAR------VSHLS 450

Query: 109 KYKIKKAGAGRS-------HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
           +     +G+ ++       HT++V+ DG     G+N  GQLG G+  +E  P  +R L +
Sbjct: 451 EIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRGQLGHGNTTSESVPKIIRSLEN 510

Query: 162 EVTATACGADFTVWLSSVEG--ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++      + +   L+  +G   ++   G   YGQLGH      ++ D  +         
Sbjct: 511 KIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHN-----DSIDRKI--------- 556

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VF 278
           P+ + AL+ + IV VACG  HT+ V   G  + +G   YG+LG    +++  P +V    
Sbjct: 557 PQFVEALSDQQIVSVACGQYHTMVVTVSGKAFAFGKNDYGQLGIDTMENQLAPVQVRGGL 616

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------------------LKNNGDDWM 320
           +R   L     I  G  ++     G  L+ +G+                  L+     + 
Sbjct: 617 ERQECLE----IRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRSNASSTSNLQLQQQRFS 672

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             + + +L G ++  +  G  H    +D+  +  +G   +G+LG G   ++    P  +D
Sbjct: 673 NARLIDELEGKDIVRIACGCYHTIAVSDNGVMYVFGRNNHGQLGTGDTTERVYPFP--ID 730

Query: 380 ILEGMHVISVACGYGHSLVI 399
              G  +  VA G+ H++V+
Sbjct: 731 DFVGKRIALVAAGFYHTVVL 750



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 16/165 (9%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++ G   YG LGH +        R+   Q+  ++     I AG+ ++      G+++  
Sbjct: 375 VWSCGQNSYGELGHGDTASRKSFERIQALQQKEIIQ----IGAGNEHTVVLTADGKVFTC 430

Query: 310 GKLKNNGD---------DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           G   +NG            +   P MD         +       V  D    + G+   G
Sbjct: 431 G-YNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAYNGCEHTILVSTDGRVATCGYNYRG 489

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +LG+G     S ++PK +  LE   V  V+C Y H+++  +  N+
Sbjct: 490 QLGHG--NTTSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNL 532


>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
          Length = 432

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 172/349 (49%), Gaps = 50/349 (14%)

Query: 80  YTWGRNERGQLGHG--------DKIQRD-----RPTIVSELSKYKIKKAGAGRSHTVVVT 126
           ++WG  + G+ G G        + IQ++     +P + ++L    IKK   G +H+++VT
Sbjct: 65  WSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKL----IKKVACGGAHSMIVT 120

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD----FTVWLSSVEGA 182
           E G  L  G N +GQLG G++ N  E         EV  T   AD    F   L++ +  
Sbjct: 121 ESGRLLTCGLNDNGQLGLGNLENASE-------FEEVKGTESIADVAAGFWHTLAASKKG 173

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            +   G  ++GQLGH         D++VKLA E    P+ I  L    I +VACG+ H++
Sbjct: 174 KLYAWGSNKHGQLGH--------HDTAVKLAVE----PQEILLLRDAPIKQVACGSYHSM 221

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+   G VYTWGFG +GRLGH   +DE++P+RV+     N+    + I AG   SS  + 
Sbjct: 222 ALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENI----SSIHAGFEYSSAVST 277

Query: 303 GGQLYMWG----KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
            G++++WG     +   GD      P++     ++R +  G+ H    + S  + +WGHA
Sbjct: 278 SGKVFVWGYGHFYVLGQGDKKDQLAPVVLDFPTSIRQLAFGSFHAAAVSHSGMLFTWGHA 337

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVIVDRTNV 405
            +G LG+G         P  +D    + +   VACG  H+LV+    +V
Sbjct: 338 THGPLGHGLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVTGTGDV 386



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 41/256 (16%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK----IKKAGAGRS 120
           C   H + V   GR  T G N+ GQLG G+          SE  + K    I    AG  
Sbjct: 111 CGGAHSMIVTESGRLLTCGLNDNGQLGLGNLEN------ASEFEEVKGTESIADVAAGFW 164

Query: 121 HTVVVTEDGNSLAFGWNKHGQLG--SGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
           HT+  ++ G   A+G NKHGQLG    +++  +EP  +  L  + +   ACG+  ++ L+
Sbjct: 165 HTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALT 224

Query: 178 SVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
             +   +   G   +G+LGHG T++E+                P+ + AL GE I  +  
Sbjct: 225 --KDGEVYTWGFGAHGRLGHGSTEDEF---------------MPKRVEALVGENISSIHA 267

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGS 294
           G  ++ AV + G V+ WG+G +  LG  ++KD+  P  +D         P ++  ++ GS
Sbjct: 268 GFEYSSAVSTSGKVFVWGYGHFYVLGQGDKKDQLAPVVLDF--------PTSIRQLAFGS 319

Query: 295 VNSSCTAGGGQLYMWG 310
            +++  +  G L+ WG
Sbjct: 320 FHAAAVSHSGMLFTWG 335



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 144/347 (41%), Gaps = 42/347 (12%)

Query: 6   AEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAG 64
           A  M+  E+G+     LL CG      +G       GNL + +    + G + I  VAAG
Sbjct: 114 AHSMIVTESGR-----LLTCGLNDNGQLGL------GNLENASEFEEVKGTESIADVAAG 162

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHT 122
               H +A   +G+ Y WG N+ GQLGH D   +    P  +  L    IK+   G  H+
Sbjct: 163 F--WHTLAASKKGKLYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHS 220

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
           + +T+DG    +G+  HG+LG GS  +E  P  V  LV E +++   G +++  +S+   
Sbjct: 221 MALTKDGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGENISSIHAGFEYSSAVST--S 278

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +   G   +  LG G        D   +LA      P +I  L        A G+ H 
Sbjct: 279 GKVFVWGYGHFYVLGQG--------DKKDQLAPVVLDFPTSIRQL--------AFGSFHA 322

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
            AV   G ++TWG   +G LGH   K   +     V      L     ++ GS ++    
Sbjct: 323 AAVSHSGMLFTWGHATHGPLGH-GLKSPNIILEPTVLDAPAQLQNSKQVACGSQHTLVVT 381

Query: 302 GGGQLYMWGKLKNNGD------DWMYPKPLMDLSGWNLRCMDSGNMH 342
           G G ++ +G             D   PK +    G +LR +  G  H
Sbjct: 382 GTGDVFSFGLGGQGQLGLGSDLDHYEPKQIPRFVGKSLRQVACGLFH 428


>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 438

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 173/357 (48%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           + F++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 10  VLFISAG--ASHSVALLSGNIVCSWGRGEDGQLGHGDAEDRLSPTQLSALDGHEIVSVTC 67

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +     + ++GW   G+LG G+  + + P P++ L   ++   ACG D    
Sbjct: 68  GADHTTAYSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIACG-DSHCL 126

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG GT     T+DS V         P+ I A  G +I  VA
Sbjct: 127 AVTMEG-EVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQAFEGISIKMVA 171

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G ++ WG+G YG LG  ++ D  VP++V     + ++    +++ G  
Sbjct: 172 AGAEHTAAVTEDGELFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDKMV----MVACGWR 227

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  L G N+  +  G  H   +  D
Sbjct: 228 HTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLEALRGDNISQISGGWRHTMALTTD 287

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G      S  P ++   +   VI ++CG+ H+L + D+ NV
Sbjct: 288 GKLYGWGWNKFGQVGAGDNIDHCS--PIQIKFPQDQKVIQISCGWRHTLAVTDKQNV 342



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/286 (30%), Positives = 136/286 (47%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L++P  ++ L G+ IR +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 87  WGDFGRLGHGNSSDLLTPKPIKALHGLKIRQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 144

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       IK   AG  HT  VTEDG    +GW ++G LG G   +
Sbjct: 145 LGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGLGDRND 204

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  + +   ACG   T+ +SS+ G  +   G  +YGQLGHG          
Sbjct: 205 RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHGD--------- 253

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E +  P  + AL G+ I +++ G  HT+A+ + G +Y WG+  +G++G  +  D
Sbjct: 254 -----FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQVGAGDNID 308

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P ++   Q   V+     IS G  ++        ++ WG+  N
Sbjct: 309 HCSPIQIKFPQDQKVIQ----ISCGWRHTLAVTDKQNVFSWGRGTN 350


>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
 gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
          Length = 5077

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 162/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  +G  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 4290 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 4349

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4350 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4409

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4410 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4455

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G + RLGH   +    P++V   Q   ++ 
Sbjct: 4456 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKKIIS 4515

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G+++ WG    + D+                           
Sbjct: 4516 ----IATGSLHCVACSDAGEVFTWG----DNDE--------------------------- 4540

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4541 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4583

Query: 406  GERL 409
             ERL
Sbjct: 4584 SERL 4587



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 156/340 (45%), Gaps = 31/340 (9%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 3124 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3183

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 3184 NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3243

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G              
Sbjct: 3244 KLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-------------- 3289

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
              E    P  I  L+G  ++++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 3290 GSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3349

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   + + V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 3350 QPIAGLRGHRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3405

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG--HAQYGELGYGP 366
                   +D+  ++      S  ++WG  +A   E   GP
Sbjct: 3406 G------LDAVIVNRVACGSSHSMAWGLPNASLDEEKRGP 3439



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 171/366 (46%), Gaps = 44/366 (12%)

Query: 46   SPT--RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
            SPT  RLRP+       +A G  S   V+ D  G+ Y  G    G+LG G       P  
Sbjct: 3088 SPTISRLRPI------HIAGGSKSLFVVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQ 3139

Query: 104  VSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-V 160
            +  L +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L  
Sbjct: 3140 LPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRA 3199

Query: 161  SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             ++   ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P
Sbjct: 3200 KKIRDIACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNATQL------KP 3243

Query: 221  RAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            + +AAL+G  +++VACG+    T+A+   G V++WG G +G+LG    +    P  ++  
Sbjct: 3244 KLVAALSGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSSTPHEIERL 3303

Query: 279  QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWN 332
                V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  
Sbjct: 3304 SGIGVIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGHR 3359

Query: 333  LRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
            +  +  G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VAC
Sbjct: 3360 VIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVIVNRVAC 3417

Query: 392  GYGHSL 397
            G  HS+
Sbjct: 3418 GSSHSM 3423



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/349 (28%), Positives = 154/349 (44%), Gaps = 40/349 (11%)

Query: 73   VDVEGRC--YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
             D E  C    WG N++ QLG   G K++   PT    +S+ +      G     VV++D
Sbjct: 3055 TDQELPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSPTISRLRPIHIAGGSKSLFVVSQD 3112

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASIL 185
            G   A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + 
Sbjct: 3113 GKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVF 3170

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G  + G+LGHG  +  +              +PR + AL  + I  +ACG++H+ A+ 
Sbjct: 3171 SWGEGEDGKLGHGNRSTLD--------------KPRLVEALRAKKIRDIACGSSHSAAIS 3216

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S+G +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    
Sbjct: 3217 SQGELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRVIQ----VACGSRDAQTLALTED 3272

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG 
Sbjct: 3273 GAVFSWGDGDFGKLGRGGSEGSSTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGK 3332

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3333 GDYYRLGHG--GDQHVRKPQPIAGLRGHRVIHVAVGALHCLAVTDAGQV 3379



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 142/333 (42%), Gaps = 32/333 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4217 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 4276

Query: 140  GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            G+LG G   +   P+ +       V +V   + G      L+      +   G  + G+L
Sbjct: 4277 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTDGEVYAWGEGEDGKL 4333

Query: 196  GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            GHG    Y+              RP+ +  L G ++  +ACG+ H+ A+ + G+V TWG 
Sbjct: 4334 GHGNRMSYD--------------RPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGK 4379

Query: 256  GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
            G YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     G
Sbjct: 4380 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 4437

Query: 311  KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
            KL   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G   
Sbjct: 4438 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSV- 4496

Query: 369  QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             +    PKKV  L+G  +IS+A G  H +   D
Sbjct: 4497 -EHVRRPKKVAALQGKKIISIATGSLHCVACSD 4528



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 106/213 (49%), Gaps = 26/213 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT++  LV + ++ V  GC   +  A+ + G  YTWGR   G+LGHG    +  P +V  
Sbjct: 689 PTKIESLVRL-VKSVYCGC--SYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMA 745

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           L  +++     G+G +HT+ +T +G   A+G   +G+LG+GS  + + P  + CL   V 
Sbjct: 746 LKDHQVVDVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCL-PRVQ 804

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPR 221
               GA F++ L S EG       L  +G+   LGH    E N +  SV         PR
Sbjct: 805 RVFAGAQFSLAL-SCEGQ------LYSWGKASCLGHQL-VERNVQGCSV---------PR 847

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            I  L  + IV VA G  H +A+ S G ++ WG
Sbjct: 848 LITGLQHKRIVDVAVGVAHCLALSSSGEIFGWG 880



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 114/260 (43%), Gaps = 28/260 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +AA C   H +AVD     Y+WG  +  +LGHGD   R+ PT +  L +  +K    G S
Sbjct: 649 IAAHCEGRHFLAVDSNFNAYSWGVGDSRRLGHGDCHARELPTKIESLVRL-VKSVYCGCS 707

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
           ++  +T  GN   +G   +G+LG G+  ++  P+ V  L   +V   A G+     L   
Sbjct: 708 YSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMVMALKDHQVVDVALGSGDAHTLCLT 767

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YG+LG+G+ N      S +    +  PR           + +V  G  
Sbjct: 768 SEGLVFAWGDGDYGKLGNGSCN-----SSLLPQLIDCLPR-----------VQRVFAGAQ 811

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            ++A+  +G +Y+WG      LGH    R  +   VPR +   Q   ++     ++ G  
Sbjct: 812 FSLALSCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITGLQHKRIVD----VAVGVA 865

Query: 296 NSSCTAGGGQLYMWGKLKNN 315
           +    +  G+++ WG+  N 
Sbjct: 866 HCLALSSSGEIFGWGRNDNQ 885



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 8/189 (4%)

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           A+  P  I +L    +  V CG +++ A+   G +YTWG G YGRLGH    D+ +P  V
Sbjct: 685 ARELPTKIESLV-RLVKSVYCGCSYSAAITLGGNLYTWGRGTYGRLGHGTSDDQCLPAMV 743

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSG 330
              + + V+  +  + +G  ++ C    G ++ W     GKL N   +      L+D   
Sbjct: 744 MALKDHQVV--DVALGSGDAHTLCLTSEGLVFAWGDGDYGKLGNGSCNSSLLPQLIDCLP 801

Query: 331 WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
              R          +  +    SWG A            +  ++P+ +  L+   ++ VA
Sbjct: 802 RVQRVFAGAQFSLALSCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITGLQHKRIVDVA 861

Query: 391 CGYGHSLVI 399
            G  H L +
Sbjct: 862 VGVAHCLAL 870


>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
 gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
          Length = 3840

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 160/364 (43%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  EG  Y WG  E G+LGHG+++  DRP +V  
Sbjct: 3053 PTLLGSLQHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGEDGKLGHGNRMSYDRPKLVEH 3112

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 3113 LNGMNVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPQLVEALLGYRAID 3172

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 3173 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 3218

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTW  G + RLGH        P++V   Q   ++ 
Sbjct: 3219 LAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAALQGKKII- 3277

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 3278 ---SIATGSLHCVACSDSGEVYTWG----DNDE--------------------------- 3303

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 3304 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 3346

Query: 406  GERL 409
             ERL
Sbjct: 3347 SERL 3350



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 1895 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 1954

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 1955 NRTTLDKPRLVETLRSKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 2014

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  S+ + G   +G+LG G     +T       
Sbjct: 2015 KLVAALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDT------- 2067

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  I  L+G  ++++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 2068 -------PHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 2120

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 2121 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 2176

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG 355
                   +D+  ++      S  I+WG
Sbjct: 2177 G------LDAVFVNRVACGSSHSIAWG 2197



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 169/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V  +  G+ Y  G    G+LG G       P  +  L
Sbjct: 1863 SRLRPI------HIAGGSKSLFIVGQN--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 1914

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L S ++ 
Sbjct: 1915 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETLRSKKIR 1974

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P+ +A
Sbjct: 1975 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNATQL------KPKLVA 2018

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +++VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 2019 ALAGRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 2078

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 2079 VI----QIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 2134

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 2135 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 2192

Query: 396  SL 397
            S+
Sbjct: 2193 SI 2194



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 150/346 (43%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D+      WG N++ QLG   G K++   PT    +S+ +      G     +V ++G  
Sbjct: 1829 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVGQNGKV 1886

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G
Sbjct: 1887 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 1944

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR +  L  + I  VACG++H+ A+ S+G
Sbjct: 1945 EGEDGKLGHGNRTTLD--------------KPRLVETLRSKKIRDVACGSSHSAAISSQG 1990

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +
Sbjct: 1991 ELYTWGLGEYGRLGHGDNATQLKPKLVAALAGRRVI----QVACGSRDAQTLALTEDGSV 2046

Query: 307  YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 2047 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDY 2106

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 2107 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 2150



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 144/336 (42%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 2980 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPVQLAGGEQSLFAVTPDGKLFATGYGSG 3039

Query: 140  GQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+    ++ +  +  A   G    + L++ EG  +   G  + G+LG
Sbjct: 3040 GRLGVGGADSWAIPTLLGSLQHVFVKKVAVNSGGKHCLALTT-EG-EVYAWGEGEDGKLG 3097

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG    Y+              RP+ +  L G  +  +ACG+ H+ A+ + G+V TWG G
Sbjct: 3098 HGNRMSYD--------------RPKLVEHLNGMNVADIACGSAHSAAITASGHVLTWGKG 3143

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 3144 RYGRLGHGDSEDQLRPQLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 3201

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S  + +W    +  LG+G    
Sbjct: 3202 LGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDH 3261

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 3262 VRR--PKKVAALQGKKIISIATGSLHCVACSDSGEV 3295



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 93/201 (46%), Gaps = 20/201 (9%)

Query: 218  PRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            P P  +  L    + KVA   G  H +A+   G V++WG G  G+LGH  +     PR V
Sbjct: 1906 PLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLV 1965

Query: 276  DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDD--WMYPKPLMDLS 329
            +  +   +      ++ GS +S+  +  G+LY WG  +     +GD+   + PK +  L+
Sbjct: 1966 ETLRSKKI----RDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKPKLVAALA 2021

Query: 330  G---WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
            G     + C         +  D S  SWG   +G+LG G  G + S  P +++ L G+ V
Sbjct: 2022 GRRVIQVACGSRDAQTLALTEDGSVFSWGDGDFGKLGRG--GSEGSDTPHEIERLSGIGV 2079

Query: 387  ISVACGYGHSLVIVDRTNVGE 407
            I + CG   SL +   T  GE
Sbjct: 2080 IQIECGAQFSLAL---TRAGE 2097


>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
            queenslandica]
          Length = 4694

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/371 (27%), Positives = 164/371 (44%), Gaps = 67/371 (18%)

Query: 30   WDAVGRRKGALDGNLVSPTRLRPLV--GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
            + A GR       N+ +PT L  L   G+ ++ +A      HC+AV  +G  Y WG  E 
Sbjct: 3893 YAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVTTQGELYAWGEGED 3952

Query: 88   GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
            G+LG G  +  + P ++  L    +  AG G SH+  +T+DG+   +G  ++G+LG    
Sbjct: 3953 GKLGLGTTVNMNVPHLIESLKSKHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDH 4012

Query: 148  RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
              + +P  V  L  E VT  ACG+     L +     + + G   YG+LG G +      
Sbjct: 4013 ETQHKPKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGN------ 4066

Query: 207  DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                    E    P+ I +L G+ ++K+ CG+  ++A+ + G+VYTWG G Y RLGH + 
Sbjct: 4067 --------EGSKVPKKIDSLTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDD 4118

Query: 267  KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
              +  PRRV       +L  E VI  G  +  C                           
Sbjct: 4119 SHQRTPRRV-----LGLLAHENVIDIGCGSLHC--------------------------- 4146

Query: 327  DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
                  + C +SG +           SWG    G++G      ++ ++PK+++I + + +
Sbjct: 4147 ------IVCTESGKV----------FSWGDNDEGQIGND--TTQAVSVPKRINITDNICI 4188

Query: 387  ISVACGYGHSL 397
              VACG  HS+
Sbjct: 4189 DHVACGSAHSI 4199



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/272 (27%), Positives = 120/272 (44%), Gaps = 24/272 (8%)

Query: 42   GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
             N+  P ++  L    +R VA  C   H +AV  +G+ ++WG  + GQLGHG     DRP
Sbjct: 2996 ANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRP 3055

Query: 102  TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
             ++       I++   G  H+  V+ +G    +G    G+LG G   N+ +P  VR L  
Sbjct: 3056 KMIEIFQAKHIREVSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEK 3115

Query: 162  -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--SSVKLAYEAQP 218
              ++  ACG+           A  L AG       G G+  +   KD  SS  +  +   
Sbjct: 3116 VRISCVACGS---------RNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVIT 3166

Query: 219  RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
             P          I+++ CG + +V +  +G VYTWG G Y RLG+     + +P  VD  
Sbjct: 3167 FP--------SNIIQIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGL 3218

Query: 279  QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                +      ++ G+++       G++Y WG
Sbjct: 3219 ASKTI----TQVAVGALHCLALTSSGEVYSWG 3246



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 146/345 (42%), Gaps = 39/345 (11%)

Query: 71   VAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAGAGRSHTVVVTED 128
            ++ D  G + + WG N+  QLG      + +  I S  L++    +   G   + VV++D
Sbjct: 2917 LSTDTHGNKVFVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHPIQFAGGSKCSFVVSDD 2976

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASIL 185
            G   A G    G+LG G   N   P  +  L   V    A +C       L+      + 
Sbjct: 2977 GKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHV--LAVTADGKVF 3034

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G  QYGQLGHG+   Y+              RP+ I     + I +V+CGT H+ AV 
Sbjct: 3035 SWGDGQYGQLGHGSLQSYD--------------RPKMIEIFQAKHIREVSCGTGHSAAVS 3080

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS-SCTAGGG 304
              G ++TWG G  GRLGH +  ++  P+ V   ++  +    + ++ GS N+ +  AG  
Sbjct: 3081 VNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRI----SCVACGSRNAHTLAAGDN 3136

Query: 305  QLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWG 355
             L+ WG        LK+       P  ++     N+  ++ G MH    +  +    +WG
Sbjct: 3137 SLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPS-NIIQIECG-MHFSVLLTKEGKVYTWG 3194

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              +Y  LG      +   +P  VD L    +  VA G  H L + 
Sbjct: 3195 KGEYYRLGNDSTSVQ--PIPTLVDGLASKTITQVAVGALHCLALT 3237



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 162/374 (43%), Gaps = 43/374 (11%)

Query: 41   DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
            +  + SP   R L  +  I+F  AG   C  V  D +G+ +  G    G+LG G      
Sbjct: 2943 EAKVKSPIESRTLARLHPIQF--AGGSKCSFVVSD-DGKVFACGEGSSGRLGIGGFANIR 2999

Query: 100  RPTIVSELSKYKIKKAG---AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
             P  +S LS Y ++K     AGR H + VT DG   ++G  ++GQLG GS+++   P  +
Sbjct: 3000 MPHQISSLSMYVVRKVAVSCAGR-HVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMI 3058

Query: 157  RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
                ++ +   +CG   +  +S V G  +   G    G+LGHG  N              
Sbjct: 3059 EIFQAKHIREVSCGTGHSAAVS-VNG-ELFTWGQGADGRLGHGDSNN------------- 3103

Query: 216  AQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVP 272
             Q +P+ + AL    I  VACG+   HT+A      ++ WG G +G+LG ++      VP
Sbjct: 3104 -QTKPKLVRALEKVRISCVACGSRNAHTLAAGDNS-LWAWGDGSFGKLGLKDGSSSTDVP 3161

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMD 327
             +V  F  N +      I  G   S      G++Y WGK     L N+         L+D
Sbjct: 3162 VQVITFPSNII-----QIECGMHFSVLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVD 3216

Query: 328  -LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
             L+   +  +  G +H      S    SWG  ++G+ G        +  P+ V  L+G  
Sbjct: 3217 GLASKTITQVAVGALHCLALTSSGEVYSWGDNEHGQQGNN--STICNRKPQIVASLKGHR 3274

Query: 386  VISVACGYGHSLVI 399
            +  +ACG  HS+  
Sbjct: 3275 ICKIACGSSHSIAF 3288



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 122/265 (46%), Gaps = 27/265 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G+ Y+WG+   G LG G+   +  PT V+ LS  +I    AG  H+  VTED
Sbjct: 519 HILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVHISAGSMHSAAVTED 578

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
           G    +G   +G+LG G+  +++ P+ V  L   ++    CG+     L+  +   + + 
Sbjct: 579 GVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTGQVWSW 638

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET-IVKVACGTNHTVAVDS 246
           G   YG+LG    ++                 P+ I+ +   + +VK+ CG   ++A+  
Sbjct: 639 GDGDYGKLGRPGSDQNKV--------------PKPISGIGSTSPVVKIICGNQISMALTK 684

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G +Y+WG G   +LGH  Q+    P+ ++      V    + +S G+ +         +
Sbjct: 685 DGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSETVV----SDVSVGAQHCVALTTDSDV 740

Query: 307 YMWGK-----LKNNGDDWMYPKPLM 326
           Y WGK     +  +GD  +   PLM
Sbjct: 741 YAWGKNSSFEVNESGD--IISSPLM 763



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 107/215 (49%), Gaps = 24/215 (11%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            +PT +  L G  I  ++AG  S H  AV  +G  YTWG+   G+LGHG+   +  PTIV
Sbjct: 549 TAPTAVAALSGDRIVHISAG--SMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIV 606

Query: 105 SELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCL-- 159
             L+  KI +   G+G +HT+ + + G   ++G   +G+LG  GS +N++ P P+  +  
Sbjct: 607 EGLNGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKV-PKPISGIGS 665

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S V    CG   ++ L+  +   + + G     QLGHG  N+ + +            +
Sbjct: 666 TSPVVKIICGNQISMALT--KDGKLYSWGCGDTYQLGHG--NQEHVR------------Q 709

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           P+ I  L+   +  V+ G  H VA+ +   VY WG
Sbjct: 710 PKLIEGLSETVVSDVSVGAQHCVALTTDSDVYAWG 744



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 96/199 (48%), Gaps = 12/199 (6%)

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           E+Q  P A+AAL+G+ IV ++ G+ H+ AV   G +YTWG G YGRLGH   +D+ +P  
Sbjct: 546 ESQTAPTAVAALSGDRIVHISAGSMHSAAVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTI 605

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MYPKPLMDL 328
           V+    N V   +    +G  ++      GQ++ W     GKL   G D    PKP+  +
Sbjct: 606 VEGL--NGVKIVQVDCGSGDAHTLALDDTGQVWSWGDGDYGKLGRPGSDQNKVPKPISGI 663

Query: 329 SGWN--LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
              +  ++ +    +   +  D    SWG     +LG+G   Q+    PK ++ L    V
Sbjct: 664 GSTSPVVKIICGNQISMALTKDGKLYSWGCGDTYQLGHG--NQEHVRQPKLIEGLSETVV 721

Query: 387 ISVACGYGHSLVIVDRTNV 405
             V+ G  H + +   ++V
Sbjct: 722 SDVSVGAQHCVALTTDSDV 740



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 16/196 (8%)

Query: 220  PRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            P  I++L+   + KVA  C   H +AV + G V++WG G YG+LGH   +    P+ +++
Sbjct: 3001 PHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFSWGDGQYGQLGHGSLQSYDRPKMIEI 3060

Query: 278  FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGW 331
            FQ  ++      +S G+ +S+  +  G+L+ WG+  +      + ++   PK +  L   
Sbjct: 3061 FQAKHIRE----VSCGTGHSAAVSVNGELFTWGQGADGRLGHGDSNNQTKPKLVRALEKV 3116

Query: 332  NLRCMDSG--NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             + C+  G  N H     D+S  +WG   +G+LG    G  S+ +P +V I    ++I +
Sbjct: 3117 RISCVACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKD-GSSSTDVPVQV-ITFPSNIIQI 3174

Query: 390  ACGYGHSLVIVDRTNV 405
             CG   S+++     V
Sbjct: 3175 ECGMHFSVLLTKEGKV 3190



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 16/172 (9%)

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
           NH +A+   G VY+WG G  G LG    + +  P  V     + ++     ISAGS++S+
Sbjct: 518 NHILALTKDGKVYSWGQGSNGVLGIGNTESQTAPTAVAALSGDRIVH----ISAGSMHSA 573

Query: 299 CTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSS 350
                G LY WGK         N +D + P  +  L+G  +  +D  SG+ H     D+ 
Sbjct: 574 AVTEDGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGLNGVKIVQVDCGSGDAHTLALDDTG 633

Query: 351 CI-SWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIV 400
            + SWG   YG+LG    G   + +PK +  I     V+ + CG   S+ + 
Sbjct: 634 QVWSWGDGDYGKLGRP--GSDQNKVPKPISGIGSTSPVVKIICGNQISMALT 683



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT +  L    I  VA G +  HC+A+   G  Y+WG NE GQ G+   I   +P IV+ 
Sbjct: 3212 PTLVDGLASKTITQVAVGAL--HCLALTSSGEVYSWGDNEHGQQGNNSTICNRKPQIVAS 3269

Query: 107  LSKYKIKKAGAGRSHTVVVTE 127
            L  ++I K   G SH++   +
Sbjct: 3270 LKGHRICKIACGSSHSIAFAQ 3290



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 11/148 (7%)

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
            V +  EG+ YTWG+ E  +LG+     +  PT+V  L+   I +   G  H + +T  G 
Sbjct: 3182 VLLTKEGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKTITQVAVGALHCLALTSSGE 3241

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSS--------VEG 181
              ++G N+HGQ G+ S     +P  V  L    +   ACG+  ++  +            
Sbjct: 3242 VYSWGDNEHGQQGNNSTICNRKPQIVASLKGHRICKIACGSSHSIAFAQGSLTTAVKFSP 3301

Query: 182  ASILNAGLPQYGQLGHG--TDNEYNTKD 207
             S  N+  P    + HG  +D+   TKD
Sbjct: 3302 ISFSNSKDPLGASIVHGKSSDDAKETKD 3329



 Score = 44.7 bits (104), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 76/201 (37%), Gaps = 14/201 (6%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G  +  VA G      +     G  ++WG  + G+LG G       P  +  
Sbjct: 4018 PKLVSALKGEQVTCVACGSGDAQTLCATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDS 4077

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
            L+   + K   G   ++ +T  G+   +G   + +LG G   ++  P  V  L++     
Sbjct: 4078 LTGKHVIKLLCGSQFSMALTTAGHVYTWGKGDYYRLGHGDDSHQRTPRRVLGLLAHENVI 4137

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              G      +   E   + + G    GQ+G+ T               +A   P+ I   
Sbjct: 4138 DIGCGSLHCIVCTESGKVFSWGDNDEGQIGNDTT--------------QAVSVPKRINIT 4183

Query: 227  AGETIVKVACGTNHTVAVDSK 247
                I  VACG+ H++A  SK
Sbjct: 4184 DNICIDHVACGSAHSIAWSSK 4204


>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
            [Polysphondylium pallidum PN500]
          Length = 1800

 Score =  135 bits (339), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 96/327 (29%), Positives = 149/327 (45%), Gaps = 46/327 (14%)

Query: 66   VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSH 121
            +SC   H VAVD   + Y+WG +  GQLGHG    ++ P  + + +   K+     G +H
Sbjct: 1091 ISCGGEHSVAVDQSFQIYSWGSSRYGQLGHGVLTPQNLPKKIEDFTGGQKVLAIATGYAH 1150

Query: 122  TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA------TACGADFTVW 175
            T+V+ + G+   FGWN  GQLG G+ +N     P+R   SE+        TA  A  +  
Sbjct: 1151 TMVLKKSGDLFTFGWNDSGQLGLGNFKNR--AVPMRIETSEIVGIHGERITAIAAGHSHS 1208

Query: 176  LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
            +  ++   I + G    GQLGHG                E   RP+ I  L G+ I+K++
Sbjct: 1209 IMCLDNGDIYSWGANSKGQLGHGN--------------IEKSLRPKQIDELKGKPIIKIS 1254

Query: 236  CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV------LPPEAV 289
            CG  HTVA+     VY WG G +  LG+   K+E  P+ ++ F    +      L   A 
Sbjct: 1255 CGHFHTVAISELNSVYCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTAT 1314

Query: 290  ISAGSVNSS----CTAGGGQLYMWGKLKNNGD------DWMYPKPLMDLSGWNLRCMDSG 339
            ++A    S        GGG+    GKL   GD      D  +P  +  L+  N+    SG
Sbjct: 1315 VTAAENGSDRGNVYICGGGE---HGKLGTGGDLKTPFFDKPHPAVIPSLNSMNIVGFSSG 1371

Query: 340  N-MHHFVGADSSCISWGHAQYGELGYG 365
            +     +  + +  +WG+  +G++G G
Sbjct: 1372 SEFSAIITNNGALYTWGYGNFGQIGNG 1398



 Score =  119 bits (299), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 77/271 (28%), Positives = 132/271 (48%), Gaps = 24/271 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP--LVGVD---IRFVAAGCVSCHCV 71
            +K G+L   G   W+  G+       N   P R+    +VG+    I  +AAG    H +
Sbjct: 1155 KKSGDLFTFG---WNDSGQLGLGNFKNRAVPMRIETSEIVGIHGERITAIAAG--HSHSI 1209

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
                 G  Y+WG N +GQLGHG+  +  RP  + EL    I K   G  HTV ++E  + 
Sbjct: 1210 MCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCGHFHTVAISELNSV 1269

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGAS----ILN 186
              +G  +H  LG+GS +NE+ P  +   ++ ++    CG   T  +++ E  S    +  
Sbjct: 1270 YCWGQGEHMCLGNGSNKNELSPKMIEFFINKKIEKVVCGLYHTATVTAAENGSDRGNVYI 1329

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
             G  ++G+LG G D         +K  +  +P P  I +L    IV  + G+  +  + +
Sbjct: 1330 CGGGEHGKLGTGGD---------LKTPFFDKPHPAVIPSLNSMNIVGFSSGSEFSAIITN 1380

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             G +YTWG+G +G++G+ + +D W+P ++ +
Sbjct: 1381 NGALYTWGYGNFGQIGNGKTEDMWLPTKISL 1411



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 76/310 (24%), Positives = 129/310 (41%), Gaps = 30/310 (9%)

Query: 111  KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATA 167
            K      G  H  V++ DG    +G N  GQLG G    + + +P R      S +   +
Sbjct: 1033 KAVSVACGWEHIAVISSDGELFTWGNNSQGQLGHGLNVGKYQSTPRRVETFKSSPIIMIS 1092

Query: 168  CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL- 226
            CG + +V +   +   I + G  +YGQLGHG                  Q  P+ I    
Sbjct: 1093 CGGEHSVAVD--QSFQIYSWGSSRYGQLGHGV--------------LTPQNLPKKIEDFT 1136

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             G+ ++ +A G  HT+ +   G ++T+G+   G+LG    K+  VP R++  +   +   
Sbjct: 1137 GGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAVPMRIETSEIVGIHGE 1196

Query: 287  E-AVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG 339
                I+AG  +S      G +Y WG          N +  + PK + +L G  +  +  G
Sbjct: 1197 RITAIAAGHSHSIMCLDNGDIYSWGANSKGQLGHGNIEKSLRPKQIDELKGKPIIKISCG 1256

Query: 340  NMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
            + H    ++ +S   WG  ++  LG G    K+   PK ++      +  V CG  H+  
Sbjct: 1257 HFHTVAISELNSVYCWGQGEHMCLGNG--SNKNELSPKMIEFFINKKIEKVVCGLYHTAT 1314

Query: 399  IVDRTNVGER 408
            +    N  +R
Sbjct: 1315 VTAAENGSDR 1324


>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
 gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
          Length = 5062

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 67/364 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  L  V ++ VA      HC+A+  +G  Y WG  E G+LGHG+++  DRP ++  
Sbjct: 4275 PTLLGSLQHVFVKKVAVNSGGKHCLALTTDGEVYAWGEGEDGKLGHGNRMSYDRPKLLEH 4334

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+      
Sbjct: 4335 LNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAID 4394

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +         KL Y+       I +
Sbjct: 4395 IACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IES 4440

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++ 
Sbjct: 4441 LAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS 4500

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G++Y WG    + D+                           
Sbjct: 4501 ----IATGSLHCVACSDAGEVYTWG----DNDE--------------------------- 4525

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +   + +
Sbjct: 4526 --------------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQL 4568

Query: 406  GERL 409
             ERL
Sbjct: 4569 SERL 4572



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 158/349 (45%), Gaps = 31/349 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 3108 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 3167

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 3168 NRSTLDKPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGLGEYGRLGHGDNATQLKP 3227

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G              
Sbjct: 3228 KLVTALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRG-------------- 3273

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
              E    P  I  L+G  ++++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 3274 GSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 3333

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 3334 QPIAGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 3389

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG--HAQYGELGYGPYGQKSSAMP 375
                   +D+  ++      S  ++WG  +A   E   GP    S+  P
Sbjct: 3390 G------LDAVFVNRVACGSSHSMAWGLPNASLDEEKRGPVPFGSTRDP 3432



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 167/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+ D  G+ Y  G    G+LG G       P  +  L
Sbjct: 3076 SRLRPI------HIAGGSKSLFVVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 3127

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 3128 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEALRAKKIR 3187

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P+ + 
Sbjct: 3188 DIACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNATQL------KPKLVT 3231

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            AL G  +++VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 3232 ALHGRRVIQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSATPHEIERLSGIG 3291

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 3292 VIQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIAGLRGRRVIHV 3347

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 3348 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3405

Query: 396  SL 397
            S+
Sbjct: 3406 SM 3407



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 151/339 (44%), Gaps = 38/339 (11%)

Query: 81   TWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
             WG N++ QLG   G K++   PT    +S+ +      G     VV++DG   A G   
Sbjct: 3049 VWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFVVSQDGKVYACGEGT 3106

Query: 139  HGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G  + G+L
Sbjct: 3107 NGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWGEGEDGKL 3164

Query: 196  GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            GHG  +  +              +PR + AL  + I  +ACG++H+ A+ S+G +YTWG 
Sbjct: 3165 GHGNRSTLD--------------KPRLVEALRAKKIRDIACGSSHSAAISSQGELYTWGL 3210

Query: 256  GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW---- 309
            G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G ++ W    
Sbjct: 3211 GEYGRLGHGDNATQLKPKLVTALHGRRVIQ----VACGSRDAQTLALTEDGAVFSWGDGD 3266

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y  LG+G 
Sbjct: 3267 FGKLGRGGSEGSATPHEIERLSGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRLGHG- 3325

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 3326 -GDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV 3363



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/333 (27%), Positives = 141/333 (42%), Gaps = 32/333 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4202 YGWGHNHRGQLGGLEGSRIKTPTPCEALSLLRPIQLAGGEQSLFAVTPDGKLFATGYGSG 4261

Query: 140  GQLGSGSIRNEIEPSPV----RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            G+LG G   +   P+ +       V +V   + G      L+      +   G  + G+L
Sbjct: 4262 GRLGVGGSDSWAIPTLLGSLQHVFVKKVAVNSGGKHC---LALTTDGEVYAWGEGEDGKL 4318

Query: 196  GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            GHG    Y+              RP+ +  L G ++  +ACG+ H+ A+ + G+V TWG 
Sbjct: 4319 GHGNRMSYD--------------RPKLLEHLNGMSVADIACGSAHSAAITASGHVLTWGK 4364

Query: 256  GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
            G YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     G
Sbjct: 4365 GRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYG 4422

Query: 311  KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
            KL   G D    P  +  L+G  +  ++ G+        S  + +WG   +  LG+G   
Sbjct: 4423 KLGRGGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVD 4482

Query: 369  QKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                  PKKV  L+G  +IS+A G  H +   D
Sbjct: 4483 HVRR--PKKVAALQGKKIISIATGSLHCVACSD 4513



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/213 (31%), Positives = 107/213 (50%), Gaps = 26/213 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT++  LV   ++ V  GC   +  A+ + G  YTWGR   G+LGHG+   +  P +V  
Sbjct: 660 PTKIESLVR-RVQSVYCGC--SYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMA 716

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           L  +++     G+G +HT+ +T  G   A+G   +G+LG+GS  + ++P  + CL   V 
Sbjct: 717 LKDHQVLDVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECL-PRVQ 775

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQ---LGHGTDNEYNTKDSSVKLAYEAQPRPR 221
               G+ F++ L + EG       L  +G+   LGH    E N +  SV         PR
Sbjct: 776 RVFAGSQFSLAL-TCEGQ------LYSWGKASCLGHQL-VERNVQGCSV---------PR 818

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            I +L  + IV VA G  H +A+ S G ++ WG
Sbjct: 819 LITSLQHKRIVHVAVGVAHCLALSSNGEIFGWG 851



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 117/260 (45%), Gaps = 28/260 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +AA C   H +AVD     Y+WG  +  +LGHGD   R+ PT +  L + +++    G S
Sbjct: 620 IAAHCEGRHFLAVDSNHNAYSWGVGDSRRLGHGDCHARELPTKIESLVR-RVQSVYCGCS 678

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
           ++  +T  GN   +G   +G+LG G+  ++  P+ V  L   +V   A G+     L   
Sbjct: 679 YSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLT 738

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
            G  +   G   YG+LG+G+ N      S   L  E  PR           + +V  G+ 
Sbjct: 739 RGGLVYAWGDGDYGKLGNGSCN-----SSLQPLLIECLPR-----------VQRVFAGSQ 782

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            ++A+  +G +Y+WG      LGH    R  +   VPR +   Q   ++     ++ G  
Sbjct: 783 FSLALTCEGQLYSWGKASC--LGHQLVERNVQGCSVPRLITSLQHKRIVH----VAVGVA 836

Query: 296 NSSCTAGGGQLYMWGKLKNN 315
           +    +  G+++ WG+  N 
Sbjct: 837 HCLALSSNGEIFGWGRNDNQ 856



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 8/189 (4%)

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           A+  P  I +L    +  V CG +++ A+  +G +YTWG G YGRLGH    D+ +P  V
Sbjct: 656 ARELPTKIESLV-RRVQSVYCGCSYSAAITLRGNLYTWGRGTYGRLGHGNSDDQCMPAMV 714

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSG 330
              + + VL  +  + +G  ++ C   GG +Y W     GKL N   +      L++   
Sbjct: 715 MALKDHQVL--DVALGSGDAHTLCLTRGGLVYAWGDGDYGKLGNGSCNSSLQPLLIECLP 772

Query: 331 WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
              R          +  +    SWG A            +  ++P+ +  L+   ++ VA
Sbjct: 773 RVQRVFAGSQFSLALTCEGQLYSWGKASCLGHQLVERNVQGCSVPRLITSLQHKRIVHVA 832

Query: 391 CGYGHSLVI 399
            G  H L +
Sbjct: 833 VGVAHCLAL 841


>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
          Length = 545

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 108/351 (30%), Positives = 168/351 (47%), Gaps = 29/351 (8%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R V   C S H V +  EG  YTWGR + G+LGHGD   +  P +V EL    I++   G
Sbjct: 35  RIVQIACGSGHTVVLTDEGEVYTWGRGDDGRLGHGDNGWKFVPRLVEELRGKNIRQVTCG 94

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
             HT  VT  G+   +G   +G+LG G+      P  V  L   +V   ACG+  TV L 
Sbjct: 95  SYHTAAVTVSGDLYTWGGGMYGKLGHGNETGHSTPFLVETLKGMQVRQVACGSRHTVVL- 153

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +E   +   G  + G  GHG D E +            Q  P  +  L G+ IV+++  
Sbjct: 154 -LENKDVYTWGDKENGVSGHG-DTEGH------------QYLPCPVEELRGKNIVQISAC 199

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
             HT A+   G V+T+G G +GRLGH  ++++ V R V+      V      ++ G  ++
Sbjct: 200 GFHTAALSEFGEVFTFGEGKFGRLGHNSERNQPVARFVEALAGKRV----KQVACGGFHT 255

Query: 298 SCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
           +     G++Y WG  ++    +GD  +   P  +  L    +  +  G  H     D+  
Sbjct: 256 AAVTETGEVYTWGGGEHGQLGHGDKVNKTVPTRVESLVEKLVVQITCGWSHTVALTDTGE 315

Query: 352 I-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + +WG+  +G+LG+    + +  +PK VD+LEG  VISVA    H++ +VD
Sbjct: 316 VYTWGNGDHGKLGHNDTTKVT--LPKLVDVLEGKRVISVASYNEHTVALVD 364



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/336 (27%), Positives = 163/336 (48%), Gaps = 31/336 (9%)

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            Y+WGR E GQLG GD   + RP  +  L++ +I +   G  HTVV+T++G    +G   
Sbjct: 3   VYSWGRGEDGQLGLGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGRGD 62

Query: 139 HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            G+LG G    +  P  V  L  + +    CG+  T  + +V G  +   G   YG+LGH
Sbjct: 63  DGRLGHGDNGWKFVPRLVEELRGKNIRQVTCGSYHTAAV-TVSG-DLYTWGGGMYGKLGH 120

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +  ++T              P  +  L G  + +VACG+ HTV +     VYTWG   
Sbjct: 121 GNETGHST--------------PFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKE 166

Query: 258 YGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
            G  GH + +  +++P  V+  +  N++     ISA   +++  +  G+++ +G+ K   
Sbjct: 167 NGVSGHGDTEGHQYLPCPVEELRGKNIVQ----ISACGFHTAALSEFGEVFTFGEGKFGR 222

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
              N+  +    + +  L+G  ++ +  G  H     ++  + +WG  ++G+LG+G    
Sbjct: 223 LGHNSERNQPVARFVEALAGKRVKQVACGGFHTAAVTETGEVYTWGGGEHGQLGHGDKVN 282

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           K+  +P +V+ L    V+ + CG+ H++ + D   V
Sbjct: 283 KT--VPTRVESLVEKLVVQITCGWSHTVALTDTGEV 316


>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
 gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 370

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 6   VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 63

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG D    
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 122

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 123 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 167

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       +    ++++ G  
Sbjct: 168 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 223

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 338



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 83  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 140

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 141 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 200

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 201 RLVPERVTSTGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 249

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 250 -----LEDHLIPHKLEALSNSFISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 304

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V       V+     +S G  ++        ++ WG+  N
Sbjct: 305 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 346



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SH+V +       ++G  + GQLG G   +   P+ +  L   ++ +  CG
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 64

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TV  S   G  + + G   +G+LGHG  ++  T              P  I AL G 
Sbjct: 65  ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 109

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV  +G V +WG    G+LG  + +D  VP+++  F+   +     +
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 165

Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++AG+ +++     G LY   WG+  N G     D + P+ +    G  +  +  G  H 
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 225

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
             V    +  ++G ++YG+LG+G    +   +P K++ L    +  ++ G+ H++ +   
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGFRHTMALTSD 283

Query: 402 ------------RTNVGERLDQ 411
                       +  VG  LDQ
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQ 305



 Score = 41.2 bits (95), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+     + +  SP ++R     D + V   C   H +AV      + WGR   GQ
Sbjct: 291 WNKFGQVGVGNNLDQCSPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 348

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LG G+ + R+ P I+  LS
Sbjct: 349 LGIGESVDRNFPKIIEALS 367


>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
 gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
           Resistance Locus 8)
          Length = 406

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 18  VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 75

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG D    
Sbjct: 76  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 134

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 135 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 179

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       +    ++++ G  
Sbjct: 180 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 235

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 236 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 350



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 95  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 152

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 153 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 212

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 213 RLVPERVTSTGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 261

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 262 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 316

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V       V+     +S G  ++        ++ WG+  N
Sbjct: 317 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 358



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SH+V +       ++G  + GQLG G   +   P+ +  L   ++ +  CG
Sbjct: 17  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 76

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TV  S   G  + + G   +G+LGHG  ++  T              P  I AL G 
Sbjct: 77  ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 121

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV  +G V +WG    G+LG  + +D  VP+++  F+   +     +
Sbjct: 122 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 177

Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++AG+ +++     G LY   WG+  N G     D + P+ +    G  +  +  G  H 
Sbjct: 178 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 237

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
             V    +  ++G ++YG+LG+G    +   +P K++ L    +  ++ G+ H++ +   
Sbjct: 238 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 295

Query: 402 ------------RTNVGERLDQ 411
                       +  VG  LDQ
Sbjct: 296 GKLYGWGWNKFGQVGVGNNLDQ 317


>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
 gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 17  VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG D    
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       +    ++++ G  
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEKM----SMVACGWR 234

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 94  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 211

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 212 RLVPERVTSAGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 260

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V       V+     +S G  ++        ++ WG+  N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 87/179 (48%), Gaps = 12/179 (6%)

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
           T++ ++ G +H+VA+ S   V +WG G  G+LGH + +D   P ++     + ++   +V
Sbjct: 16  TVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIV---SV 72

Query: 290 ISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
                   + +  G ++Y W     G+L + N  D   P P+  L G  ++ +  G+ H 
Sbjct: 73  TCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHC 132

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             V  +    SWG  Q G+LG G    + S +P+K+   EG+ +  VA G  H+  + +
Sbjct: 133 LAVTMEGEVQSWGRNQNGQLGLGD--TEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTE 189


>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
          Length = 440

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 17  VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG D    
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIPIKMVA 178

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       +    ++++ G  
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 234

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 131/286 (45%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 94  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +       IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 260

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V       V+     +S G  ++        ++ WG+  N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SH+V +       ++G  + GQLG G   +   P+ +  L   ++ +  CG
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TV  S   G  + + G   +G+LGHG  ++  T              P  I AL G 
Sbjct: 76  ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 120

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV  +G V +WG    G+LG  + +D  VP+++  F+      P  +
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEG----IPIKM 176

Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++AG+ +++     G LY   WG+  N G     D + P+ +    G  +  +  G  H 
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
             V    +  ++G ++YG+LG+G    +   +P K++ L    +  ++ G+ H++ +   
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 402 ------------RTNVGERLDQ 411
                       +  VG  LDQ
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQ 316


>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
 gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
 gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
 gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
          Length = 440

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 17  VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 74

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG D    
Sbjct: 75  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 133

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 134 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 178

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       +    ++++ G  
Sbjct: 179 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 234

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 235 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 349



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 94  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 211

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 212 RLVPERVTSTGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 260

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 261 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V       V+     +S G  ++        ++ WG+  N
Sbjct: 316 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SH+V +       ++G  + GQLG G   +   P+ +  L   ++ +  CG
Sbjct: 16  KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 75

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TV  S   G  + + G   +G+LGHG  ++  T              P  I AL G 
Sbjct: 76  ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 120

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV  +G V +WG    G+LG  + +D  VP+++  F+   +     +
Sbjct: 121 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 176

Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++AG+ +++     G LY   WG+  N G     D + P+ +    G  +  +  G  H 
Sbjct: 177 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 236

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
             V    +  ++G ++YG+LG+G    +   +P K++ L    +  ++ G+ H++ +   
Sbjct: 237 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 294

Query: 402 ------------RTNVGERLDQ 411
                       +  VG  LDQ
Sbjct: 295 GKLYGWGWNKFGQVGVGNNLDQ 316


>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
 gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
          Length = 374

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 6   VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 63

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG D    
Sbjct: 64  GADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACG-DSHCL 122

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++EG  + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 123 AVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKMVA 167

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       +    ++++ G  
Sbjct: 168 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKM----SMVACGWR 223

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 224 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 338



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 83  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 140

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 141 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 200

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 201 RLVPERVTSTGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 249

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 250 -----LEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 304

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V       V+     +S G  ++        ++ WG+  N
Sbjct: 305 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 346



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 42/322 (13%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SH+V +       ++G  + GQLG G   +   P+ +  L   ++ +  CG
Sbjct: 5   KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCG 64

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TV  S   G  + + G   +G+LGHG  ++  T              P  I AL G 
Sbjct: 65  ADHTVAYSQ-SGMEVYSWGWGDFGRLGHGNSSDLFT--------------PLPIKALHGI 109

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV  +G V +WG    G+LG  + +D  VP+++  F+   +     +
Sbjct: 110 RIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRI----KM 165

Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++AG+ +++     G LY   WG+  N G     D + P+ +    G  +  +  G  H 
Sbjct: 166 VAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWRHT 225

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD- 401
             V    +  ++G ++YG+LG+G    +   +P K++ L    +  ++ G+ H++ +   
Sbjct: 226 ISVSYSGALYTYGWSKYGQLGHGDL--EDHLIPHKLEALSNSFISQISGGWRHTMALTSD 283

Query: 402 ------------RTNVGERLDQ 411
                       +  VG  LDQ
Sbjct: 284 GKLYGWGWNKFGQVGVGNNLDQ 305



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+     + +  SP ++R     D + V   C   H +AV      + WGR   GQ
Sbjct: 291 WNKFGQVGVGNNLDQCSPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 348

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LG G+ + R+ P I+  LS
Sbjct: 349 LGIGESVDRNFPKIIEALS 367


>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Brachypodium distachyon]
          Length = 449

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 170/358 (47%), Gaps = 35/358 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCY-TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           +  V+AG  + H VA+ +EG    +WGR E GQLGHGD   R  PT++S     +I    
Sbjct: 23  VVLVSAG--ASHSVAL-LEGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGFDAPRITSVI 79

Query: 117 AGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
            G  HT   +E+   + ++GW   G+LG G+  +   P PVR L   ++   ACG     
Sbjct: 80  CGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHC- 138

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+   G  + + G  Q GQLG GT     T+DS +         P+ I A  G  +  +
Sbjct: 139 -LAVTMGGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFEGICVKMI 183

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A G  HT AV   G +Y WG+G YG LG  ++ D +VP +V + +   ++    +I+ G 
Sbjct: 184 AAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEKMV----LIACGW 239

Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
            ++   +  G LY +G  K     +GD  D ++P  +  L   +   +  G  H   + +
Sbjct: 240 RHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSSTSQISGGWRHTMALTS 299

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           D     WG  ++G++G G      S  P +V       V  VACG+ H+L   ++ NV
Sbjct: 300 DGKLYGWGWNKFGQVGAGDSVDHCS--PVQVMFPAEQKVAQVACGWRHTLAYTEKKNV 355



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 115/247 (46%), Gaps = 19/247 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  +R L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFTPQPVRALQGIKIKQMA--CGDSHCLAVTMGGEVQSWGRNQNGQ 157

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 158 LGLGTTEDSLLPQKIQAFEGICVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 217

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +  E +   ACG   T+ +SS     +   G  +YGQLGHG          
Sbjct: 218 RFVPEKVSLVEGEKMVLIACGWRHTITVSS--SGILYTYGWSKYGQLGHGD--------- 266

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   +  +++ G  HT+A+ S G +Y WG+  +G++G  +  D
Sbjct: 267 -----FEDHLFPHKVEALKDSSTSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVD 321

Query: 269 EWVPRRV 275
              P +V
Sbjct: 322 HCSPVQV 328



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 151/329 (45%), Gaps = 32/329 (9%)

Query: 49  RLRPLV--GVDI-RFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           RL P V  G D  R  +  C + H  A  + E + Y+WG  + G+LGHG+      P  V
Sbjct: 61  RLVPTVISGFDAPRITSVICGADHTTAYSEEEQQVYSWGWGDFGRLGHGNSSDVFTPQPV 120

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
             L   KIK+   G SH + VT  G   ++G N++GQLG G+  + + P  ++      V
Sbjct: 121 RALQGIKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFEGICV 180

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A GA+ T   +  E   +   G  +YG LG G  N+                 P  +
Sbjct: 181 KMIAAGAEHTA--AVTEDGDLYGWGWGRYGNLGLGDRNDRFV--------------PEKV 224

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           + + GE +V +ACG  HT+ V S G +YT+G+  YG+LGH + +D   P +V+  + ++ 
Sbjct: 225 SLVEGEKMVLIACGWRHTITVSSSGILYTYGWSKYGQLGHGDFEDHLFPHKVEALKDSST 284

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMD 337
               + IS G  ++      G+LY WG  K      GD  D   P  +M  +   +  + 
Sbjct: 285 ----SQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVA 340

Query: 338 SGNMHHFVGAD-SSCISWGHAQYGELGYG 365
            G  H     +  +  +WG    G+LG+G
Sbjct: 341 CGWRHTLAYTEKKNVFAWGRGTSGQLGHG 369



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 68/149 (45%), Gaps = 10/149 (6%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G+ Y WG N+ GQ+G GD +    P  V   ++ K+ +   G  HT+  TE 
Sbjct: 293 HTMALTSDGKLYGWGWNKFGQVGAGDSVDHCSPVQVMFPAEQKVAQVACGWRHTLAYTEK 352

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFT--VWLSSVEG 181
            N  A+G    GQLG G I +  +P  +  +      S+   ++    FT  VW+S  E 
Sbjct: 353 KNVFAWGRGTSGQLGHGEIVDRNKPLMIDAISPDGSGSKKLESSTAVPFTAKVWVSPSER 412

Query: 182 ASIL---NAGLPQYGQLGHGTDNEYNTKD 207
            +++       P  G  G+G D      D
Sbjct: 413 YALVPDEKVAKPGVGTAGNGADASVPEND 441


>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
          Length = 4839

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+   +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4198 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 3015 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3132

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3193 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3239 FRLGHGTDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3286



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3034

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3094

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3141

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3142 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3199 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3254

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3312

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3313 QKITRVACGSSHSV 3326



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 163/370 (44%), Gaps = 43/370 (11%)

Query: 51   RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELS 108
            +P  G  +R  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS
Sbjct: 2941 KPNTGSLVRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLS 2994

Query: 109  KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVT 164
               + +   G      VT +G   A G   +G+LG    SG++    + + +   V +  
Sbjct: 2995 ALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKV 3054

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
            A   G    + L +V+G  + + G    G+LGH +    +              +PR I 
Sbjct: 3055 AVHSGGRHAMAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIE 3098

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            AL  + I  +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+
Sbjct: 3099 ALKTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVI 3158

Query: 285  PPEAVISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCM 336
                 ++ GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  +
Sbjct: 3159 Q----VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQI 3214

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
            + G         S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H
Sbjct: 3215 ECGAQFSLALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALH 3272

Query: 396  SLVIVDRTNV 405
             L + D   V
Sbjct: 3273 CLAVTDTGQV 3282



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    IVKV CG+  ++A+   G VYTWG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  +   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + L S EG  + + G  + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL-SFEG-EVYSWGEAEDG 4074

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEG 4063

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLFTWG 4121

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4122 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4223

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4284 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 151/372 (40%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N+  P +   L  + +  VA  C     + +   GR YT   N    LG         P
Sbjct: 438 ANVSGPIQCEGLANLGVMQVA--CAEKRFLILSRNGRVYTQAYNS-DTLG---------P 485

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   I K  A     H + ++ +G   ++G    G+LG G      EP  +  L
Sbjct: 486 QLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISAL 545

Query: 160 V-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V   ACG+ ++  +++ EG  +   G   YG+LGHG+               
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGSS-------------- 589

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           E Q  P  +  L G  ++ V+CG+    T+AV   G V++WG G YG+LG         P
Sbjct: 590 EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + ++  Q  +++     +  GS  S      GQ+Y WGK  N        +   YPK L 
Sbjct: 650 KLIEKLQDLDIVK----VRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +  +    + +   P  +  L+  H
Sbjct: 706 GLKGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKH 763

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 764 IVGIACGPAQSF 775



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 535

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648

Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           PK    L DL    +RC    ++   +  D    +WG      LG+G   ++    PK +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 704

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
           + L+G  VI VA G  H L + + + V
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4015 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4059

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
              +G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 4060 SFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----IAAGGAHSACITAAG 4115

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             L+ WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 4116 DLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 4173

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4174 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4218



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3090 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3147

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3148 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3208 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVH 3265

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 242  VA 243
            VA
Sbjct: 3326 VA 3327



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4184 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 4301 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4341



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWT 3329



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ YTWG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 106/257 (41%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  KM+   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
               I K   G   ++ +T+DG    +G   + +LG G+  +   P  +  L   +V   
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDV 715

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  T  L+  E + + + G            N+      ++++    +P P A+  L
Sbjct: 716 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPAALPGL 759

Query: 227 AGETIVKVACGTNHTVA 243
             + IV +ACG   + A
Sbjct: 760 DTKHIVGIACGPAQSFA 776



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 443 PIQCEGLANLGVMQVACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G V++WG G  GRLGH +      P+ +              I+ GS 
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + ++ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALT 674



 Score = 37.7 bits (86), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   +  +   
Sbjct: 4007 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSFEGEV 4065

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112


>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 439

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 140/306 (45%), Gaps = 28/306 (9%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  +R L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 94  WGDFGRLGHGNSSDLFIPQPIRALQGLRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       IK   AG  H+V +TE+G    +GW ++G LG G   +
Sbjct: 152 LGLGTTEDSLVPQKIQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRND 211

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
              P  V     ++   ACG   T+ +SS     +   G  +YGQLGHG     + KD  
Sbjct: 212 RCIPEKVSVDCDKMVLVACGWRHTISVSS--SGELYTYGWSKYGQLGHG-----DCKDHL 264

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           V         P  + A + + I +V+ G  HT+A+ + G +Y WG+  +G++G  +  D 
Sbjct: 265 V---------PHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDR 315

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GD--DWMYPK 323
             P +V       V    A IS G  ++        +Y WG+  N     GD  DW YPK
Sbjct: 316 CSPVQVKFPHDQKV----AQISCGWRHTIAVTEKDNVYSWGRGTNGQLGIGDTIDWNYPK 371

Query: 324 PLMDLS 329
            +  LS
Sbjct: 372 IIEALS 377



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 169/371 (45%), Gaps = 36/371 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V  T   P     +  ++AG    H VA+       +WGR E GQLGHGD   R  PT +
Sbjct: 4   VEATTASPPPPRRVLLISAG--GSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQL 61

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-E 162
           S L   +I     G  HT+  +E    + ++GW   G+LG G+  +   P P+R L    
Sbjct: 62  SALDAQQIVSVVCGADHTLAYSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQGLR 121

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +   ACG D      ++EG  + + G  Q GQLG GT     T+DS V         P+ 
Sbjct: 122 IKQIACG-DSHCLAVTMEG-EVQSWGRNQNGQLGLGT-----TEDSLV---------PQK 165

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           I    G  I  VA G  H+VA+   G +Y WG+G YG LG  ++ D  +P +V V     
Sbjct: 166 IQTFQGVPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVDCDKM 225

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCM 336
           VL     ++ G  ++   +  G+LY +G  K     +GD  D + P  L   S   L C 
Sbjct: 226 VL-----VACGWRHTISVSSSGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSD-KLICQ 279

Query: 337 DSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            SG   H +   +      WG  ++G++G G    + S  P +V       V  ++CG+ 
Sbjct: 280 VSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNVDRCS--PVQVKFPHDQKVAQISCGWR 337

Query: 395 HSLVIVDRTNV 405
           H++ + ++ NV
Sbjct: 338 HTIAVTEKDNV 348



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 143/314 (45%), Gaps = 32/314 (10%)

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
           +Q    T  S     ++    AG SH+V +       ++G  + GQLG G   + + P+ 
Sbjct: 1   MQEVEATTASPPPPRRVLLISAGGSHSVALISGNVVCSWGRGEDGQLGHGDTDDRLLPTQ 60

Query: 156 VRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           +  L   ++ +  CGAD T+  S  +   + + G   +G+LGHG     N+ D  +    
Sbjct: 61  LSALDAQQIVSVVCGADHTLAYSESK-VEVYSWGWGDFGRLGHG-----NSSDLFI---- 110

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
                P+ I AL G  I ++ACG +H +AV  +G V +WG    G+LG    +D  VP++
Sbjct: 111 -----PQPIRALQGLRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTEDSLVPQK 165

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMD 327
           +  FQ      P  +++AG+ +S      G+LY WG        L +  D  +  K  +D
Sbjct: 166 IQTFQG----VPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGLGDRNDRCIPEKVSVD 221

Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
                +  +  G  H   V +     ++G ++YG+LG+G    K   +P K+       +
Sbjct: 222 CD--KMVLVACGWRHTISVSSSGELYTYGWSKYGQLGHGDC--KDHLVPHKLQAFSDKLI 277

Query: 387 ISVACGYGHSLVIV 400
             V+ G+ H++ + 
Sbjct: 278 CQVSGGWRHTMALT 291


>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
          Length = 389

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++ +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP 
Sbjct: 92  SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR 151

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
           ++  L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L   
Sbjct: 152 VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 211

Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            V   ACG+     L   +  ++ + G   YG+LG G  +                  P 
Sbjct: 212 RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PM 257

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q  
Sbjct: 258 KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 317

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            V+     I+ GS++  C    G++Y WG
Sbjct: 318 KVI----AIATGSLHCVCCTEDGEVYTWG 342



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/339 (28%), Positives = 149/339 (43%), Gaps = 30/339 (8%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 20  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 79

Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
              G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 80  GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 137

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 138 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 183

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
           G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 241

Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
            GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGS 301

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                   P++V  L+G  VI++A G  H +   +   V
Sbjct: 302 --DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV 338



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
           AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 67  AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 126

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
              ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAA--GDLYTWG 184

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
             +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 185 KGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 230

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
              V++WG G YG+LG        VP ++D      V+  E     GS  S      G +
Sbjct: 231 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVE----CGSQFSVALTKSGAV 286

Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
           Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 346

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 347 GQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 382



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 117/285 (41%), Gaps = 34/285 (11%)

Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
           G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 18  GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 77

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                           Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 78  G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 122

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 123 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 178

Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVGADSSCISWG 355
            LY WGK +      ++ +D + PK +  L G    ++ C         +  D +  SWG
Sbjct: 179 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWG 238

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 239 DGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 281



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L G+++  VAAG    H   V   G  YTWG+   G+LGH D   + +P +V  
Sbjct: 150 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 207

Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 208 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 267

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
               CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 268 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 325

Query: 205 -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                  T+D  V                 A  RPR +AAL G+ + +VACG+ HT+A
Sbjct: 326 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 383



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/144 (34%), Positives = 66/144 (45%), Gaps = 5/144 (3%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 247 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 303

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 304 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 363

Query: 157 RCLV-SEVTATACGADFTV-WLSS 178
             L   +V   ACG+  T+ W +S
Sbjct: 364 AALQGKKVNRVACGSAHTLAWSTS 387


>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
           Protein Uvr8
          Length = 372

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 167/357 (46%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  ++I     
Sbjct: 8   VLIISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC 65

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HTV  ++ G  + ++GW   G+LG G+  +   P P++ L    +   ACG      
Sbjct: 66  GADHTVAYSQSGXEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHC-- 123

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG G     +T+DS V         P+ I A  G  I  VA
Sbjct: 124 LAVTXEGEVQSWGRNQNGQLGLG-----DTEDSLV---------PQKIQAFEGIRIKXVA 169

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP RV     +      + ++ G  
Sbjct: 170 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERV----TSTGGEKXSXVACGWR 225

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  LS   +  +  G  H   + +D
Sbjct: 226 HTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGARHTXALTSD 285

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G    + S  P +V   +   V+ V+CG+ H+L + +R NV
Sbjct: 286 GKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQVSCGWRHTLAVTERNNV 340



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 136/307 (44%), Gaps = 29/307 (9%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV  EG   +WGRN+ GQ
Sbjct: 85  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTXEGEVQSWGRNQNGQ 142

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 143 LGLGDTEDSLVPQKIQAFEGIRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTD 202

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E  +  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 203 RLVPERVTSTGGEKXSXVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 251

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL+   I +++ G  HT A+ S G +Y WG+  +G++G     D
Sbjct: 252 -----LEDHLIPHKLEALSNSFISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNLD 306

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYP 322
           +  P +V       V+     +S G  ++        ++ WG+  N         D  +P
Sbjct: 307 QCSPVQVRFPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP 362

Query: 323 KPLMDLS 329
           K +  LS
Sbjct: 363 KIIEALS 369


>gi|427795675|gb|JAA63289.1| Putative protein rcc2, partial [Rhipicephalus pulchellus]
          Length = 388

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 124/246 (50%), Gaps = 28/246 (11%)

Query: 19  GGELLFCGSTCWDAVGRRK-------GALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHC 70
            G LLF G T WD +GRR         + + NL  P RL  P     ++ V +GC +CH 
Sbjct: 137 AGTLLFSGGTNWDTIGRRPKDKQKAGASQERNLWGPHRLAWPH---RVKAVFSGCSACHT 193

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           V +  +G+ +TWGRN++GQLG  D  +RD PT+V  L    +  A  GR+HT+ +T+ G+
Sbjct: 194 VLLTEQGQAFTWGRNDKGQLGQCDLKRRDLPTLVETLKDSMVVAAACGRAHTLFLTDHGS 253

Query: 131 SLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
             A G NK GQ G GS    +  P+ V   +      +CG +F+V +       +   G 
Sbjct: 254 VFACGDNKMGQCGVGSQNASVHVPTRVAFKLRPAVRVSCGGEFSVLVDC--RGHVYTFGC 311

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET------------IVKVACG 237
           P+YGQLGH TD  Y    +S KL ++ +  PR +                   IV+VA G
Sbjct: 312 PEYGQLGHNTDGRYFV--TSNKLQFKCELVPRRVQVFIDRNREGHVVSVDDVHIVEVASG 369

Query: 238 TNHTVA 243
            NHTV+
Sbjct: 370 LNHTVS 375



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 103/217 (47%), Gaps = 31/217 (14%)

Query: 81  TWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           T GR  + +   G   +R+   P  ++   + K   +G    HTV++TE G +  +G N 
Sbjct: 150 TIGRRPKDKQKAGASQERNLWGPHRLAWPHRVKAVFSGCSACHTVLLTEQGQAFTWGRND 209

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            GQLG   ++    P+ V  L  S V A ACG   T++L+  +  S+   G  + GQ G 
Sbjct: 210 KGQLGQCDLKRRDLPTLVETLKDSMVVAAACGRAHTLFLT--DHGSVFACGDNKMGQCGV 267

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+ N   +     ++A++ +P             V+V+CG   +V VD +G+VYT+G   
Sbjct: 268 GSQNA--SVHVPTRVAFKLRP------------AVRVSCGGEFSVLVDCRGHVYTFGCPE 313

Query: 258 YGRLGHR------------EQKDEWVPRRVDVFQRNN 282
           YG+LGH             + K E VPRRV VF   N
Sbjct: 314 YGQLGHNTDGRYFVTSNKLQFKCELVPRRVQVFIDRN 350


>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
            gallopavo]
          Length = 4815

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4008 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4067

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+   +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4068 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4127

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4128 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4173

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4174 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4233

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4234 ----AIATGSLHCVCCTEDGEVYTWG 4255



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 2991 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3048

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3049 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3108

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3109 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3168

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3169 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3214

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3215 FRLGHGTDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3262



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2953 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3010

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3011 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKP 3070

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3071 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3117

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3118 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3174

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3175 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3230

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3231 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3288

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3289 QKITRVACGSSHSV 3302



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            +R  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2924 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2977

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3037

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
              + L +V+G  I + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3038 HAMAL-TVDG-KIFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3081

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3082 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3137

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3138 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3197

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3198 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3255

Query: 403  TNV 405
              V
Sbjct: 3256 GQV 3258



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 453 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 512

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 513 EEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 572

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 573 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 624

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    IVKV CG+  ++A+   G VYTWG G   RLGH  ++    P+
Sbjct: 625 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 678

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  +   V+     ++AGS +        +++ WG
Sbjct: 679 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 711



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3933 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3992

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3993 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4050

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 4051 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4096

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 4097 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4154

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4155 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4213

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4214 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4241



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3980 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4039

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4040 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLFTWG 4097

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4098 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4143

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4144 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4199

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4200 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4259

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4260 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4295



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 143/353 (40%), Gaps = 48/353 (13%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C     + +   GR YT   N    LG         P +V  L+   I K  A   
Sbjct: 431 VQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVKIAAHSD 480

Query: 121 --HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFT 173
             H + ++ +G   ++G    G+LG G      EP  +  L        V   ACG+ ++
Sbjct: 481 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYS 540

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             +++ EG  +   G   YG+LGHG+               E Q  P  +  L G  ++ 
Sbjct: 541 AAITA-EG-ELYTWGRGNYGRLGHGSS--------------EDQTIPMLVTGLKGLKVID 584

Query: 234 VACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           V+CG+    T+AV   G V++WG G YG+LG         P+ ++  Q  +++     + 
Sbjct: 585 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVK----VR 640

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
            GS  S      GQ+Y WGK  N        +   YPK L  L G  +  + +G+ H   
Sbjct: 641 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 700

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +  DS   SWG     +  +    + +   P  +  L+  H++ +ACG   S 
Sbjct: 701 LTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSF 751



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 461 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 511

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 512 LE-----EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 566

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 567 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 624

Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           PK    L DL    +RC    ++   +  D    +WG      LG+G   ++    PK +
Sbjct: 625 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 680

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
           + L+G  VI VA G  H L + + + V
Sbjct: 681 EGLKGKKVIDVAAGSTHCLALTEDSEV 707



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3931 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3989

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3990 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4035

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 4036 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----IAAGGAHSACITAAG 4091

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             L+ WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 4092 DLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 4149

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4150 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4194



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3066 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3123

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3124 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3183

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3184 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVH 3241

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3242 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3301

Query: 242  VA 243
            VA
Sbjct: 3302 VA 3303



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4160 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4216

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4217 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4276

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 4277 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4317



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 62/267 (23%), Positives = 100/267 (37%), Gaps = 23/267 (8%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3222 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3279

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CL 159
            PT+V  L   KI +   G SH+V            W     + + S+   +     R  L
Sbjct: 3280 PTLVQGLEGQKITRVACGSSHSV-----------AWTT-VDVATPSVHEPVLFQTARDPL 3327

Query: 160  VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--SSVKLAYEAQ 217
             +        AD +   + + GA+ L    P   ++    D     +   S + +A +  
Sbjct: 3328 GASYLGVPSDADSSAASNKISGANSLKPNRPSLAKILLSLDGNVAKQQALSHILMALQIM 3387

Query: 218  PRPRAI--AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG----YGRLGHREQKDEWV 271
                A+  A +    I  V C ++            T   G      G +  R   + W 
Sbjct: 3388 YARDAVVGALMPASMIAPVECPSSSPAPPSDATSTGTPSSGDECMLVGDIEERLSPNPWQ 3447

Query: 272  PRRVDVFQRNNVLPPEAVISAGSVNSS 298
             RR +V    + + P AV  + +  SS
Sbjct: 3448 DRRGEVVSSEDAVTPSAVTPSAAAASS 3474



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ YTWG+ +  +LGHG +     P ++  L   K+    
Sbjct: 633 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 692

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 693 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA 752

Query: 175 WLSSVE 180
           W S  E
Sbjct: 753 WSSCSE 758



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +V++AC                                           
Sbjct: 419 PIQCEGLASLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 478

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G V++WG G  GRLGH +      P+ +              I+ GS 
Sbjct: 479 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 538

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 539 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTLA 596

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + ++ V CG   S+ + 
Sbjct: 597 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALT 650



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 512 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 571

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 572 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
               I K   G   ++ +T+DG    +G   + +LG G+  +   P  +  L   +V   
Sbjct: 632 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDV 691

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  T  L+  E + + + G            N+      ++++    +P P A+  L
Sbjct: 692 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPAALPGL 735

Query: 227 AGETIVKVACGTNHTVA 243
             + IV +ACG   + A
Sbjct: 736 DTKHIVGIACGPAQSFA 752



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  + K A G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2918 ANTGSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2975

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 2976 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3031

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 3032 VHSGGRHAMALTVDGKIFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3089

Query: 395  HSLVIV 400
            HS  I 
Sbjct: 3090 HSAAIT 3095



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3926 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3982

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3983 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4041

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 4042 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4088


>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
 gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
          Length = 444

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 176/379 (46%), Gaps = 39/379 (10%)

Query: 37  KGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
           +GA  G+ VS P R        +  ++AG  + H VA+       +WGR E GQLGHGD 
Sbjct: 5   EGAASGSEVSGPIR-------QVILISAG--ASHSVALLSGNIVCSWGRGEDGQLGHGDA 55

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPS 154
             R  PT +S L    I     G  HT   +E    + ++GW   G+LG G+  +   P 
Sbjct: 56  EDRPTPTQLSTLDGLDIISITCGADHTTSYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQ 115

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
           P++ L S ++   ACG      L+      + + G  Q GQLG GT     T+DS V   
Sbjct: 116 PIKALHSLKIRQIACGDSHC--LAVTMDGEVQSWGRNQNGQLGLGT-----TEDSLV--- 165

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I A  G +I  VA G  HT AV   G +Y WG+G YG LG  ++ D  VP 
Sbjct: 166 ------PQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPE 219

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMD 327
           +V +   + ++    +++ G  ++   +  G LY +G  K     +GD  D + P  +  
Sbjct: 220 KVSLVNGDKMI----MVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEA 275

Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           L    +  +  G  H   + +D +   WG  ++G++G G      S +  K    +   +
Sbjct: 276 LRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSL 335

Query: 387 ISVACGYGHSLVIVDRTNV 405
           + ++CG+ H+L I +R NV
Sbjct: 336 VQISCGWRHTLAITERQNV 354



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 115/247 (46%), Gaps = 19/247 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L  + IR +A  C   HC+AV ++G   +WGRN+ GQ
Sbjct: 97  WGDFGRLGHGNSSDLFTPQPIKALHSLKIRQIA--CGDSHCLAVTMDGEVQSWGRNQNGQ 154

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       IK   AG  HT  VTEDG    +GW ++G LG G   +
Sbjct: 155 LGLGTTEDSLVPQKIQAFQGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 214

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  + +   ACG   T+ +SS  G  +   G  +YGQLGHG          
Sbjct: 215 RLVPEKVSLVNGDKMIMVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------- 263

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL    I  ++ G  HT+A+ S G +Y WG+  +G++G  +  D
Sbjct: 264 -----FEDHLTPHKVEALRDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNID 318

Query: 269 EWVPRRV 275
              P +V
Sbjct: 319 HCSPVQV 325



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 5/149 (3%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + +   C   H ++V   G  YT+G ++ GQLGHGD      P  V  L    I     G
Sbjct: 228 KMIMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKVEALRDSYISMISGG 287

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVW 175
             HT+ +T DGN   +GWNK GQ+G G   +   P  V+        +   +CG   T  
Sbjct: 288 WRHTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQVKFPHEQAHSLVQISCGWRHT-- 345

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           L+  E  ++ + G    GQLGHG   + N
Sbjct: 346 LAITERQNVFSWGRGTNGQLGHGESMDRN 374



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 4/120 (3%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P ++  L    I  ++ G    H +A+  +G  Y WG N+ GQ+G GD I    P  V
Sbjct: 268 LTPHKVEALRDSYISMISGGWR--HTMALTSDGNLYGWGWNKFGQVGVGDNIDHCSPVQV 325

Query: 105 S--ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
                  + + +   G  HT+ +TE  N  ++G   +GQLG G   +   P  +  L ++
Sbjct: 326 KFPHEQAHSLVQISCGWRHTLAITERQNVFSWGRGTNGQLGHGESMDRNLPKIIEVLSAD 385


>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
          Length = 5197

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 157/358 (43%), Gaps = 66/358 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            ++ +PT +  L  V I+ VA      HC+A+  +G  ++WG  E G+LGHG++   DRP 
Sbjct: 4449 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4508

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            ++  LS   +     G +H+  +T  G+ L +G  ++G+LG G   ++++P  V  L+  
Sbjct: 4509 LIEALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4568

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
                 ACG+     L   +  ++ + G   YG+LG G  +                  P 
Sbjct: 4569 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PM 4614

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I +LAG  + KV CG+  +VA+   G VYTWG G Y RLGH        P++V   Q  
Sbjct: 4615 KIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4674

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
             ++     I+ GS++    + GG+++ WG    + D+                       
Sbjct: 4675 KIIS----IATGSLHCVACSDGGEVFTWG----DNDE----------------------- 4703

Query: 342  HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                              G+LG G     +   P+ V  L+G H++ V CG  H+L +
Sbjct: 4704 ------------------GQLGDGTVS--AIQRPRLVQSLQGKHIVKVICGSAHTLAL 4741



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 147/332 (44%), Gaps = 30/332 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            + WG N RGQLG  D  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4380 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 4439

Query: 140  GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+ V  L   + +  A   G    + LSS     + + G  + G+LG
Sbjct: 4440 GRLGIGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4497

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG  + Y+              RP+ I AL+G  ++ +ACG+ H+  + S+G+V TWG G
Sbjct: 4498 HGNRDSYD--------------RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKG 4543

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4544 RYGRLGHGDSEDQLQPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4601

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S S  +WG   Y  LG+G    
Sbjct: 4602 LGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NT 4659

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                 PKKV  L+G  +IS+A G  H +   D
Sbjct: 4660 DHVRRPKKVAALQGKKIISIATGSLHCVACSD 4691



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G+L  CG       GR     + N+ +P ++  L    ++ VA      H +A+ ++G
Sbjct: 3291 QDGKLYACGE---GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3347

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  E G+LGHG+++  ++P ++  L   +I+    G SH+  +T  G    +G  
Sbjct: 3348 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3407

Query: 138  KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    +++P  V  L    V   ACG+     L   E   + + G   +G+LG
Sbjct: 3408 EYGRLGHGDNCTQLKPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3467

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  +  L G  ++++ CG   ++A+   G V+TWG G
Sbjct: 3468 RG--------------GSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKG 3513

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             Y RLGH   +    P  +   +   V+     ++ G+++       GQ+Y WG
Sbjct: 3514 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVYAWG 3563



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 174/375 (46%), Gaps = 41/375 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--NERGQLGHGD 94
            G L G+ V  PT    L  +    +A G  S   V+ D  G+ Y  G   N R  LGH +
Sbjct: 3255 GGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD--GKLYACGEGTNGRLGLGHNN 3312

Query: 95   KIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
             +    P  V  LS+Y +KK    +G  H + +T DG   ++G  + G+LG G+     +
Sbjct: 3313 NV--PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3370

Query: 153  PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P  +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG        D+  +
Sbjct: 3371 PKLIETLRTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG--------DNCTQ 3420

Query: 212  LAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
            L      +P+ + ALA   +V+VACG+    T+ +  +G V++WG G +G+LG    +  
Sbjct: 3421 L------KPKLVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC 3474

Query: 270  WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PK 323
             +P +V+      V+     I  G+  S      G+++ WGK     L +  D  +  P 
Sbjct: 3475 SIPHQVERLNGVGVMQ----IECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPT 3530

Query: 324  PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            P+  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  L+
Sbjct: 3531 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLD 3588

Query: 383  GMHVISVACGYGHSL 397
            G+ V  VACG  HS+
Sbjct: 3589 GIFVNRVACGSSHSV 3603



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 150/344 (43%), Gaps = 34/344 (9%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            ++  +   WG N++ QLG   G K++   PT  S LS+ K      G     +V++DG  
Sbjct: 3238 ELSSKVLVWGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKL 3295

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  V  L   V +  A   G    + L +++G  + + G
Sbjct: 3296 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMAL-TLDG-KVFSWG 3353

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG            +L  E   +P+ I  L  + I  +ACG++H+ A+ S G
Sbjct: 3354 EGEDGKLGHGN-----------RLTLE---KPKLIETLRTKRIRDIACGSSHSAAITSSG 3399

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             +YTWG G YGRLGH +   +  P+ V     + V+  +    +    + C    G ++ 
Sbjct: 3400 ELYTWGLGEYGRLGHGDNCTQLKPKLVTALADHRVV--QVACGSRDAQTLCLTEEGLVFS 3457

Query: 309  W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G +    P  +  L+G  +  ++ G         S  + +WG   Y  
Sbjct: 3458 WGDGDFGKLGRGGSEGCSIPHQVERLNGVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3517

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G    +    P  +  L G  VI VA G  H L + D   V
Sbjct: 3518 LGHG--TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV 3559



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/270 (28%), Positives = 129/270 (47%), Gaps = 18/270 (6%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +  +P  +  L  V+I  +AA C   H +A+   G  ++WG  E G+LGHGD   +D PT
Sbjct: 615 DTTAPKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPT 674

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            +  L++ ++     G S++  +T  G    +G   +G+LG G+  ++  P+ V+ L  +
Sbjct: 675 RIVALAERQVTGVFCGSSYSAAITAAGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQ 734

Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            V   A G      L   +   +   G   +G+LG+GT N      SSV +A E  P+  
Sbjct: 735 RVIHVALGCGDAHSLCVTDTGIVYAWGDGDFGKLGNGTCN-----GSSVPVAIEL-PQ-- 786

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
                  +  VKV  G++ +VA+   G VY+WG G  GRLGH   +    P+ +   +  
Sbjct: 787 -----CSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGHGHSEHTASPKAIQALEGK 841

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           N++     ++ G  +       G+LY WG+
Sbjct: 842 NIVD----LAVGLAHCLALTASGELYGWGR 867



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 100/216 (46%), Gaps = 26/216 (12%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG   + ++KD            P  I ALA   +  V CG++++ A+ + G +YT
Sbjct: 660 GRLGHG---DTSSKDI-----------PTRIVALAERQVTGVFCGSSYSAAITAAGELYT 705

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
           WG G YGRLGH   +D+ +P  V V ++  V+     +  G  +S C    G +Y WG  
Sbjct: 706 WGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVI--HVALGCGDAHSLCVTDTGIVYAWGDG 763

Query: 311 ---KLKN---NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
              KL N   NG        L   S   ++     +    +G D +  SWG    G LG+
Sbjct: 764 DFGKLGNGTCNGSSVPVAIELPQCSDGAVKVFSGSHFSVALGRDGTVYSWGKGHGGRLGH 823

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                + +A PK +  LEG +++ +A G  H L + 
Sbjct: 824 --GHSEHTASPKAIQALEGKNIVDLAVGLAHCLALT 857



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 45/241 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+ +  +A  C S H   +  +G   TWG+   G+LGHGD   + +P +V  
Sbjct: 4507 PKLIEALSGIGVIDIA--CGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEA 4564

Query: 107  LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  Y+      G+G + T+ +T+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4565 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4624

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
            T   CG+ F+V L+     S+   G   Y +LGHG  +          L           
Sbjct: 4625 TKVECGSQFSVALT--RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4682

Query: 213  ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
                                          A  RPR + +L G+ IVKV CG+ HT+A+ 
Sbjct: 4683 SLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4742

Query: 246  S 246
            +
Sbjct: 4743 T 4743



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 103/246 (41%), Gaps = 53/246 (21%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
             L  P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3367 TLEKPKLIETLRTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK 3424

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
            +V+ L+ +++ +   G   + T+ +TE+G   ++G    G+LG G     SI +++E   
Sbjct: 3425 LVTALADHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSIPHQVE--- 3481

Query: 156  VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------- 204
             R     V    CGA F++ L+  +   +   G   Y +LGHGTD               
Sbjct: 3482 -RLNGVGVMQIECGAQFSLALT--KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3538

Query: 205  --------------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACG 237
                            DS    A+                 +P  +  L G  + +VACG
Sbjct: 3539 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3598

Query: 238  TNHTVA 243
            ++H+VA
Sbjct: 3599 SSHSVA 3604



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 4/145 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG+  
Sbjct: 4604 RGGSDGCKV-PMKIESLAGLGVTKVE--CGSQFSVALTRSGSVYTWGKGDYHRLGHGNTD 4660

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G++     P  V
Sbjct: 4661 HVRRPKKVAALQGKKIISIATGSLHCVACSDGGEVFTWGDNDEGQLGDGTVSAIQRPRLV 4720

Query: 157  RCLV-SEVTATACGADFTVWLSSVE 180
            + L    +    CG+  T+ LS+ +
Sbjct: 4721 QSLQGKHIVKVICGSAHTLALSTYQ 4745



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/186 (25%), Positives = 70/186 (37%), Gaps = 55/186 (29%)

Query: 220 PRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ I  L    IV++A  C   H +A+ + G V++WG G  GRLGH +   + +P R+  
Sbjct: 619 PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVA 678

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
                V      +  GS  S+     G+LY                              
Sbjct: 679 LAERQV----TGVFCGSSYSAAITAAGELY------------------------------ 704

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA--CGYGH 395
                          +WG   YG LG+G    +   +P  V +L+   VI VA  CG  H
Sbjct: 705 ---------------TWGRGTYGRLGHG--NSEDKHLPTIVQVLKQQRVIHVALGCGDAH 747

Query: 396 SLVIVD 401
           SL + D
Sbjct: 748 SLCVTD 753



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 3/71 (4%)

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            ++SG  H   + +D    SWG  + G+LG+G   + S   PK ++ L G+ VI +ACG  
Sbjct: 4469 VNSGGKHCLALSSDGEVFSWGEGEDGKLGHG--NRDSYDRPKLIEALSGIGVIDIACGSA 4526

Query: 395  HSLVIVDRTNV 405
            HS  I  + +V
Sbjct: 4527 HSACITSQGHV 4537


>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
          Length = 4833

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4026 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4085

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4086 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4145

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +   + + G   YG+LG G  +                  P  I 
Sbjct: 4146 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI--------------PMKID 4191

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4192 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4251

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4252 ----AIATGSLHCVCCTEDGEVYTWG 4273



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    I+ VA      H +A+ V+G+ 
Sbjct: 3008 GKIYACGEATNGRLGL--GLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKV 3065

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G   ++G  ++
Sbjct: 3066 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3125

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    ++ P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3126 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRG 3185

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3186 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3231

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3232 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3279



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 170/374 (45%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2970 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRLGLGLSS 3027

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y IKK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3028 GTIPIPRQITALSNYVIKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3087

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     + + GL +YG+LGHG +            
Sbjct: 3088 RLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHGDNT----------- 3134

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q RP+ +  L G  +++VACG+    T+A+  +G+V++WG G +G+LG    +   
Sbjct: 3135 ---TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCN 3191

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
            VP+ ++      V      I  G+  S      G ++ WGK       +G D    KP M
Sbjct: 3192 VPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQM 3247

Query: 327  --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
               L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3248 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3305

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3306 QKITRVACGSSHSV 3319



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3951 GTIYGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4010

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +     A   G    + LSS EG  + + G  + G
Sbjct: 4011 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4068

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 4069 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4114

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ VD  Q + V+  +    +G   + C      ++ W    
Sbjct: 4115 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 4172

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4173 YGKLGRGGSDGCKIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4231

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4232 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4259



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            A  +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G
Sbjct: 2951 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3008

Query: 130  NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
               A G   +G+LG    SG+I    + + +   V +  A   G    + L +V+G  + 
Sbjct: 3009 KIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVHSGGRHAMAL-TVDG-KVF 3066

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ 
Sbjct: 3067 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3112

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +Y+WG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    
Sbjct: 3113 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDE 3168

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG 
Sbjct: 3169 GFVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3228

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3229 GDYFRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3275



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 118/271 (43%), Gaps = 23/271 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L    I  +AA     H +A+   G  ++WG  + G+LGHGD    + P ++
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMI 532

Query: 105 SELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
              +  +  K       G +++  +T DG    +G   +G+LG GS  ++  P  V    
Sbjct: 533 GTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTPMVVTAFK 592

Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   ACG+     L+  E   + + G   YG+LG G  +   T              
Sbjct: 593 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 638

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +  L    IVKV CG+  +VA+   G VYTWG G   RLGH   +    P+ +D  Q
Sbjct: 639 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 698

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
              V+     ++ GS +       G++  WG
Sbjct: 699 GKKVVD----VAVGSTHCLALTDDGEVLSWG 725



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 140/331 (42%), Gaps = 40/331 (12%)

Query: 101 PTIVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           P ++  LS  KI K  A     H + ++ +G   ++G    G+LG G      EP  +  
Sbjct: 475 PMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDTTYLEEPKMIGT 534

Query: 159 LV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
                    V   ACG+ ++  +++     +   G   YG+LGHG+              
Sbjct: 535 FNGKQAGKHVVHVACGSTYSAAITA--DGELYTWGRGNYGRLGHGSS------------- 579

Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
            E Q  P  + A  G  +V VACG+    T+AV   G V++WG G YG+LG         
Sbjct: 580 -EDQTTPMVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 638

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDD--WMYPKPL 325
           P+ V+  Q  +++     +  GS  S      GQ+Y WGK  N    +G D    YPK L
Sbjct: 639 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL 694

Query: 326 MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
             L G  +  +  G+ H   +  D   +SWG     +     +  K    PK +  L   
Sbjct: 695 DSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQ--PKALPGLNSK 752

Query: 385 HVISVACGYGHSLVIVDRT--NVGERLDQVI 413
           H++ ++CG G S      +  +VG+R+  V+
Sbjct: 753 HIVGISCGPGQSFAWSSSSEWSVGKRVPFVV 783



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 155/355 (43%), Gaps = 36/355 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    I+K    +G  H + ++ +G
Sbjct: 3998 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4057

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4058 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELFTWG 4115

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ VACG+    T+ +  
Sbjct: 4116 KGRYGRLGHG--------DS------EDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTD 4161

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        +P ++D      V+     +  GS  S      G +
Sbjct: 4162 DDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4217

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4218 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4277

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV--IVDRTNVGERLDQV 412
            G+LG G     +   P+ V  L+G  +  VACG  H+L       TN G+   QV
Sbjct: 4278 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQV 4330



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 30/263 (11%)

Query: 151 IEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
           + P  +  L S ++   A   D   +L+      + + G    G+LGHG D  Y  +   
Sbjct: 473 LAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG-DTTYLEE--- 528

Query: 210 VKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                     P+ I       AG+ +V VACG+ ++ A+ + G +YTWG G YGRLGH  
Sbjct: 529 ----------PKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGS 578

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-W 319
            +D+  P  V  F+   V+  +    +G   +      GQ++ W     GKL   G D  
Sbjct: 579 SEDQTTPMVVTAFKGLKVV--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 636

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
             PK +  L   ++  +  G+     +  D    +WG      LG+G    +    PK +
Sbjct: 637 KTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG--TDEHVRYPKLL 694

Query: 379 DILEGMHVISVACGYGHSLVIVD 401
           D L+G  V+ VA G  H L + D
Sbjct: 695 DSLQGKKVVDVAVGSTHCLALTD 717



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L GV++  +AAG    H   +   G  +TWG+   G+LGHGD   + +P +V  
Sbjct: 4081 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4138

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 4139 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGV 4198

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4199 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4256

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ I +VACG+ HT+A
Sbjct: 4257 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4314



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  Y+WG  E G+LGHGD   + RP 
Sbjct: 3083 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK 3140

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3141 LVKVLLGHRVIQVACGSRDAQTLALTDEGFVFSWGDGDFGKLGRGGSEGCNVPQNIERLN 3200

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3201 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVH 3258

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3259 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3318

Query: 242  VA 243
            VA
Sbjct: 3319 VA 3320



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4178 RGGSDGCKI-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4234

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4235 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4294

Query: 157  RCLV-SEVTATACGADFTVWLSSVE--GASILNAGLP-QYGQL 195
              L   ++   ACG+  T+  S+ +   A  L A +P +Y  L
Sbjct: 4295 AALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL 4337



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   VA+  +G+ YTWG+ +  +LGHG       P ++  L   K+    
Sbjct: 647 DLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQGKKVVDVA 706

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV- 174
            G +H + +T+DG  L++G N   Q       N+ +P  +  L S+ +   +CG   +  
Sbjct: 707 VGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQPKALPGLNSKHIVGISCGPGQSFA 766

Query: 175 WLSSVE 180
           W SS E
Sbjct: 767 WSSSSE 772



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 100/261 (38%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  KM+    GK+ G  ++   CGST   A+              GR       +  +P
Sbjct: 526 LEEPKMIGTFNGKQAGKHVVHVACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTTP 585

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +    G+ +  VA G      +AV   G+ ++WG  + G+LG G       P +V +L
Sbjct: 586 MVVTAFKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 645

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               I K   G   +V +T+DG    +G   + +LG G+  +   P              
Sbjct: 646 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPK------------- 692

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY-----NTKDSSVKLAYEAQPRPRA 222
                   L S++G  +++  +     L    D E      N K       +  + +P+A
Sbjct: 693 -------LLDSLQGKKVVDVAVGSTHCLALTDDGEVLSWGSNDKLQHFDTLFSNKKQPKA 745

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV ++CG   + A
Sbjct: 746 LPGLNSKHIVGISCGPGQSFA 766



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3239 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3296

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3297 PTLVQGLEGQKITRVACGSSHSVAWT 3322



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 73/184 (39%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            AG    K   G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2937 AGSLARKKPSGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2993

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2994 ---VAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIPIPRQITALSNYVIKKVAVH 3050

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3051 SGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3108

Query: 397  LVIV 400
              I 
Sbjct: 3109 AAIT 3112



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTSTEALA---TLRPVQLIGGEQTLFAVT 4000

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    +R   ++SG  H   + ++   
Sbjct: 4001 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4059

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 4060 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4106


>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
          Length = 3645

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 2838 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGELYSWGEAEDGKLGHGNRSPCDRPRVIE 2897

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 2898 SLRGVEVVDIAAGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHRVI 2957

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +   + + G   YG+LG G  +                  P  I 
Sbjct: 2958 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3003

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3004 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3063

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 3064 ----AIATGSLHCVCCTEDGEVYTWG 3085



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 1820 GKVYACGEATNGRLGL--GLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 1877

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G   ++G  ++
Sbjct: 1878 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 1937

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    ++ P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 1938 GRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRG 1997

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 1998 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2043

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ++ WG
Sbjct: 2044 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTETGQVFAWG 2091



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV  EG+ Y  G    G+LG G   
Sbjct: 1782 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTAEGKVYACGEATNGRLGLGLSS 1839

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  +S LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 1840 GTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 1899

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     + + GL +YG+LGHG +            
Sbjct: 1900 RLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHGDNT----------- 1946

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q RP+ +  L G  +V+VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 1947 ---TQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCN 2003

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP M
Sbjct: 2004 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQM 2059

Query: 327  --DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
               L G  +  +  G +H     ++    +WG   +G+ G G      +  P  V  LEG
Sbjct: 2060 VEGLRGKKIVHVAVGALHCLAVTETGQVFAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 2117

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 2118 QKITRVACGSSHSV 2131



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 2763 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2822

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +     A   G    + LSS EG  + + G  + G
Sbjct: 2823 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-ELYSWGEAEDG 2880

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G +YTW
Sbjct: 2881 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELYTW 2926

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 2927 GKGRYGRLGHGDSEDQLKPKLVEALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 2984

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 2985 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3043

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3044 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 3071



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            A  +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G
Sbjct: 1763 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTAEG 1820

Query: 130  NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
               A G   +G+LG    SG+I    + S +   V +  A   G    + L +V+G  + 
Sbjct: 1821 KVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 1878

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ 
Sbjct: 1879 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 1924

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +Y+WG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    
Sbjct: 1925 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQ----VACGSRDAQTLALTDE 1980

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG 
Sbjct: 1981 GMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2040

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G         P+ V+ L G  ++ VA G  H L + +   V
Sbjct: 2041 GDYFRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTETGQV 2087



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 155/355 (43%), Gaps = 36/355 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    I+K    +G  H + ++ +G
Sbjct: 2810 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 2869

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 2870 ELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELYTWG 2927

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ VACG+    T+ +  
Sbjct: 2928 KGRYGRLGHG--------DS------EDQLKPKLVEALQGHRVIDVACGSGDAQTLCLTD 2973

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 2974 DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 3029

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3030 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3089

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV--IVDRTNVGERLDQV 412
            G+LG G     +   P+ V  L+G  +  VACG  H+L       TN G+   QV
Sbjct: 3090 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQV 3142



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 2761 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYAT 2820

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 2821 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLAL 2865

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G +Y+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 2866 SSEGELYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVD----IAAGGAHSACITASG 2921

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
            +LY WGK +       + +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 2922 ELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGH--RVIDVACGSGDAQTLCLTDDDMVWS 2979

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 2980 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3024



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L GV++  +AAG    H   +   G  YTWG+   G+LGHGD   + +P +V  
Sbjct: 2893 PRVIESLRGVEVVDIAAG--GAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKLVEA 2950

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 2951 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 3010

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 3011 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 3068

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ I +VACG+ HT+A
Sbjct: 3069 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 3126



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  Y+WG  E G+LGHGD   + RP 
Sbjct: 1895 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK 1952

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 1953 LVKVLLGHRVVQVACGSRDAQTLALTDEGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2012

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                 V 
Sbjct: 2013 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVH 2070

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 2071 VAVGALHCLAVTETGQVFAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2130

Query: 242  VA 243
            VA
Sbjct: 2131 VA 2132



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 2990 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3046

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3047 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3106

Query: 157  RCLV-SEVTATACGADFTVWLSSVE--GASILNAGLP-QYGQL 195
              L   ++   ACG+  T+  S+ +   A  L A +P +Y  L
Sbjct: 3107 AALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL 3149



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 118/288 (40%), Gaps = 47/288 (16%)

Query: 139  HGQLGSGSIRNEIEP-SPVRCLVS-----EVTATACGADFTVWLSSVEGASILNA----- 187
            HG    G +R E E  + V  L S     E   TA G+     LS +E A+ +       
Sbjct: 1714 HGLSAVGRVRAEDEDLATVPFLASDNEEEEDEKTATGSMSRKRLSGLESAATIRTKVFVW 1773

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            GL    QLG         K S +K+       P     L+   +V+VA G+    AV ++
Sbjct: 1774 GLNDKDQLG-------GLKGSKIKV-------PSFSETLSALNVVQVAGGSKSLFAVTAE 1819

Query: 248  GYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G VY  G    GRLG         +PR++     N V+   AV S G    + T   G++
Sbjct: 1820 GKVYACGEATNGRLGLGLSSGTIPIPRQISALS-NYVVKKVAVHSGGRHAMALTV-DGKV 1877

Query: 307  YMWGKLKNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWG 355
            + WG+    GDD             P+ +  L    +R +  G+ H   + +     SWG
Sbjct: 1878 FSWGE----GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWG 1933

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY--GHSLVIVD 401
              +YG LG+G     +   PK V +L G  V+ VACG     +L + D
Sbjct: 1934 LGEYGRLGHG--DNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTD 1979



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ + WG N+ GQ G+G      +
Sbjct: 2051 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTETGQVFAWGDNDHGQQGNGTTTVNRK 2108

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 2109 PTLVQGLEGQKITRVACGSSHSVAWT 2134



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 2756 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALA---TLRPVQLIGGEQTLFAVT 2812

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    +R   ++SG  H   + ++   
Sbjct: 2813 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEL 2871

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 2872 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 2918


>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
          Length = 4833

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG +   DRP +V 
Sbjct: 4031 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVE 4090

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4091 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4150

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4151 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKIE 4196

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4197 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4256

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4257 ----AIATGSLHCVCCTEDGEVYTWG 4278



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3014 GKVYACGEATNGRLGL--GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3071

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3072 FSWGEGDDGKLGHFSRMNCDKPRLIEALRAKRIRDIACGSSHSAALTSSGELYTWGLGEY 3131

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3132 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3191

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3192 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3237

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3238 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3285



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 165/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2976 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3033

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3034 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3093

Query: 154  SPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L    +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3094 RLIEALRAKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3140

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3141 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3197

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3198 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3253

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3254 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3311

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3312 QKITRVACGSSHSV 3325



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4015

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +     A   G    + LSS EG  + + G  + G
Sbjct: 4016 GAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4073

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG+ +  +              RPR + +L G  +V VA G  H+  V + G +YTW
Sbjct: 4074 KLGHGSRSPCD--------------RPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4119

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+V Q + V+  +    +G   + C      ++ W    
Sbjct: 4120 GKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4178 YGKLGRGGSDGCKVPMKIESLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4236

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4237 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4264



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/346 (27%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            V  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2960 VRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3017

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            A G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3018 ACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3075

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3076 EGDDGKLGHFSRMNCD--------------KPRLIEALRAKRIRDIACGSSHSAALTSSG 3121

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3122 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3177

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3178 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3237

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3238 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3281



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +    +     G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  +VA+   G VY+WG G   RLGH  ++    PR
Sbjct: 649 ------PKLIEKLQDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPR 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++      V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLHGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    I+K    +G  H + ++ +G
Sbjct: 4003 AVTADGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4062

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG GS      P  V  L   EV   A G   +  +++     +   G
Sbjct: 4063 EVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4120

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ +  L G  +V VACG+    T+ +  
Sbjct: 4121 KGRYGRLGHS--------DS------EDQLKPKLVEVLQGHRVVDVACGSGDAQTLCLTD 4166

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP +++      V+     +  GS  S      G +
Sbjct: 4167 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGVVK----VECGSQFSVALTKSGAV 4222

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4223 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4283 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 119/271 (43%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A +G+     +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC         +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLEVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           P+ ++ L G  VI VA G  H L + + + V
Sbjct: 701 PRLLEGLHGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 152/372 (40%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N++ P +   L  + +  +A  C     + +   GR YT   N        D +    P
Sbjct: 438 ANVIGPIQCEGLANLGVTQIA--CAEKRFLILSRNGRVYTQAYN-------SDTLA---P 485

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   I K  A     H + +   G   ++G    G+LG G      EP  +   
Sbjct: 486 QLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAF 545

Query: 160 V-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V   ACG+ ++  +++ EG  +   G   YG+LGHG+     ++D ++    
Sbjct: 546 SGKQGGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI---- 594

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                P  +A L G  ++ VACG+    T+AV   G V++WG G YG+LG         P
Sbjct: 595 -----PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + ++  Q   V+     +  GS  S      GQ+Y WGK  N        +   YP+ L 
Sbjct: 650 KLIEKLQDLEVVK----VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPRLLE 705

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +  +    + +   P  +  L+  H
Sbjct: 706 GLHGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKH 763

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 764 IVGIACGPAQSF 775



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 38/286 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3954 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4013

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4014 G---------------YGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLAL 4058

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR V+  +   V+     ++AG  +S+C    G
Sbjct: 4059 SSEGEVYSWGEAEDGKLGHGSRSPCDRPRVVESLRGIEVVD----VAAGGAHSACVTAAG 4114

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4115 DLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4172

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            WG   YG+LG G  G     +P K++ L G+ V+ V CG   S+ +
Sbjct: 4173 WGDGDYGKLGRG--GSDGCKVPMKIESLTGLGVVKVECGSQFSVAL 4216



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+++  VAAG    H   V   G  YTWG+   G+LGH D   + +P +V  
Sbjct: 4086 PRVVESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEV 4143

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 4144 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESLTGLGV 4203

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4204 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4261

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ + +VACG+ HT+A
Sbjct: 4262 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3089 NCDKPRLIEALRAKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3146

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3147 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3206

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3207 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3264

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3265 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3324

Query: 242  VA 243
            VA
Sbjct: 3325 VA 3326



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4183 RGGSDGCKV-PMKIESLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4239

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4240 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4299

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + +S         G+L      EYN
Sbjct: 4300 AALQGKKVNRVACGSAHTLAWSTSKPSS--------AGKLPAQVPMEYN 4340



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3245 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3302

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3303 PTLVQGLEGQKITRVACGSSHSVAWT 3328



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
              ++ K   G   +V +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 656 QDLEVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 699

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
               +   L  + G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 700 ----YPRLLEGLHGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 53/235 (22%), Positives = 86/235 (36%), Gaps = 59/235 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G V++WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ +
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLEVVKVRCGSQFSVAL 673



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 18/183 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K + G   + AV +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2943 SGSLIRKKSAGLESSAAVRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2999

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 3000 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3056

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L    +  +ACG  HS
Sbjct: 3057 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALRAKRIRDIACGSSHS 3114

Query: 397  LVI 399
              +
Sbjct: 3115 AAL 3117



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4005

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    +R   ++SG  H   + ++   
Sbjct: 4006 A-DGKLYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4064

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ V+ L G+ V+ VA G  HS
Sbjct: 4065 YSWGEAEDGKLGHG--SRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107


>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
          Length = 440

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 116/370 (31%), Positives = 175/370 (47%), Gaps = 39/370 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V+P   R L+      ++AG  + H VA+       +WGR E GQLGHGD   R  PT +
Sbjct: 10  VTPPPRRVLI------ISAG--ASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRLSPTQL 61

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-E 162
           S L  ++I     G  HTV  +E    + ++GW   G+LG G+  +   P P++ L    
Sbjct: 62  SALDDHQIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR 121

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +   ACG D      ++EG  + + G  Q GQLG G     +T+DS V         P+ 
Sbjct: 122 IKQIACG-DSHCLAVTMEG-EVQSWGRNQNGQLGLG-----DTEDSLV---------PQK 165

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           I A  G  I  VA G  HT AV   G +Y WG+G YG LG  ++ D  VP RV       
Sbjct: 166 IQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCM 336
           +    ++++ G  ++   +  G LY +G  K     +GD  D + P  L  L    +  +
Sbjct: 226 M----SMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLVPHKLEALGNSVISQI 281

Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G  H   + +D     WG  ++G++G G    + S  P +V I +   V+ V+CG+ H
Sbjct: 282 SGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS--PVQVRIPDDQKVVQVSCGWRH 339

Query: 396 SLVIVDRTNV 405
           +L + +R NV
Sbjct: 340 TLAVTERNNV 349



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 85/286 (29%), Positives = 132/286 (46%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV +EG   +WGRN+ GQ
Sbjct: 94  WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIA--CGDSHCLAVTMEGEVQSWGRNQNGQ 151

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +      +IK   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 152 LGLGDTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 211

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V     E ++  ACG   T+ +S     ++   G  +YGQLGHG          
Sbjct: 212 RLVPERVTSAGGEKMSMVACGWRHTISVSY--SGALYTYGWSKYGQLGHGD--------- 260

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E    P  + AL    I +++ G  HT+A+ S G +Y WG+  +G++G     D
Sbjct: 261 -----LEDHLVPHKLEALGNSVISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLD 315

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +  P +V +     V+     +S G  ++        ++ WG+  N
Sbjct: 316 QCSPVQVRIPDDQKVVQ----VSCGWRHTLAVTERNNVFAWGRGTN 357


>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
            anatinus]
          Length = 3053

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V ++ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP +V 
Sbjct: 2246 TPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 2305

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+  ++G  ++G+LG G   ++++P  V  L    V 
Sbjct: 2306 SLRGIEVVDIAAGGAHSACITVAGDLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 2365

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 2366 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 2411

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 2412 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 2471

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 2472 ----AIATGSLHCVCCTEDGEVYTWG 2493



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/392 (23%), Positives = 162/392 (41%), Gaps = 66/392 (16%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 1201 GKVYACGEATNGRLGL--GISSGTVPLPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 1258

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 1259 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 1318

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 1319 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1378

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G +
Sbjct: 1379 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDF 1424

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
            G L                       P   ++ +G+V+              +++N G  
Sbjct: 1425 GEL----------------------RPDSHIVQSGNVSDRM-----------RVRNKG-A 1450

Query: 319  WMYPKPLMDL-----SGWNLRCMDSGN-MHHFVGADS-------SCISWGHAQYGELGYG 365
             + P P   L      GW +  ++  + +  F G             +WG   +G+ G G
Sbjct: 1451 CLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGNG 1510

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                  +  P  V  LEG  +  VACG  HS+
Sbjct: 1511 --TTTVNRKPTLVQGLEGQKITRVACGSSHSV 1540



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   +I  VAA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 181 AYNSDTLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 240

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 241 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 300

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 301 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 352

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    IVKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 353 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 406

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 407 LLEGLQGKKVVD----VAAGSTHCLALTEDSEVHSWG 439



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 2171 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 2230

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 2231 GAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 2288

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR + +L G  +V +A G  H+  +   G +Y+W
Sbjct: 2289 KLGHGNRSPCD--------------RPRVVESLRGIEVVDIAAGGAHSACITVAGDLYSW 2334

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 2335 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 2392

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 2393 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 2451

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 2452 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 2479



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 143/320 (44%), Gaps = 41/320 (12%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  A+G  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 1134 IRKKASGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 1187

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 1188 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVAVHSGGR 1247

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
              + L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 1248 HAMAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 1291

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 1292 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 1347

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 1348 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 1407

Query: 344  FVGADSSCI-SWGHAQYGEL 362
                 S  + +WG   +GEL
Sbjct: 1408 LALTKSGVVWTWGRGDFGEL 1427



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    +KK    +G  H + ++ +G
Sbjct: 2218 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 2277

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  V  L   EV   A G   +  ++      + + G
Sbjct: 2278 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDIAAGGAHSACITV--AGDLYSWG 2335

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 2336 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 2381

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 2382 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 2437

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 2438 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 2497

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 2498 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 2533



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 150/372 (40%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N++ P +   L  + +  +A  C     + +   GR Y    N    LG         P
Sbjct: 142 ANVIGPIQCEGLANLGVTQIA--CAEKRFLILSRNGRVYVQAYNS-DTLG---------P 189

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   I K  A     H + +   G   ++G    G+LG G      EP  +  L
Sbjct: 190 QLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISAL 249

Query: 160 VSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
             +     V   ACG+ ++  +++ EG  +   G   YG+LGHG+               
Sbjct: 250 SGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGSS-------------- 293

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           E Q  P  +  L G  ++ V+CG+    T+AV   G V++WG G YG+LG         P
Sbjct: 294 EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 353

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + ++  Q  +++     +  GS  S      GQ+Y WGK  N        +   YPK L 
Sbjct: 354 KLIEKLQDLDIVK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 409

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +  +    + +   P  +  L+  H
Sbjct: 410 GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKPQPSALPGLDTKH 467

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 468 IVGIACGPAQSF 479



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 189 PQLVQGLASRNIVKVAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG---------DTVP 239

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 240 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 294

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 295 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 352

Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    PK +
Sbjct: 353 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLL 408

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
           + L+G  V+ VA G  H L + + + V
Sbjct: 409 EGLQGKKVVDVAAGSTHCLALTEDSEV 435



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 2169 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 2228

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    + KVA   G  H +A+
Sbjct: 2229 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLAL 2273

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR V+  +   V+     I+AG  +S+C    G
Sbjct: 2274 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVD----IAAGGAHSACITVAG 2329

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 2330 DLYSWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 2387

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 2388 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 2432



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 2398 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 2454

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 2455 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 2514

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 2515 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 2555



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 108/257 (42%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  KM+   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 240 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 299

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 300 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 359

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
               I K   G   ++ +T+DG   ++G   + +LG G+  +   P  +  L   +V   
Sbjct: 360 QDLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDV 419

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  T  L+  E + + + G            N+      ++++    +P+P A+  L
Sbjct: 420 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPQPSALPGL 463

Query: 227 AGETIVKVACGTNHTVA 243
             + IV +ACG   + A
Sbjct: 464 DTKHIVGIACGPAQSFA 480



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 22/196 (11%)

Query: 220  PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
            P     L+   +V+VA G+    AV  +G VY  G    GRLG         +PR++   
Sbjct: 1173 PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITAL 1232

Query: 279  QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY----------PKPLMDL 328
              N V+   AV S G    + T   G+++ WG+    GDD             P+ +  L
Sbjct: 1233 S-NYVVKKVAVHSGGRHAMALTV-DGKVFSWGE----GDDGKLGHFSRMNCDKPRLIEAL 1286

Query: 329  SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
                +R +  G+ H   + +     +WG  +YG LG+G     +   PK V +L G  VI
Sbjct: 1287 KTKRIRDIACGSSHSAAITSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVI 1344

Query: 388  SVACGY--GHSLVIVD 401
             VACG     +L + D
Sbjct: 1345 QVACGSRDAQTLALTD 1360



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 361 DLDIVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVA 420

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + +PS +  L    +   ACG A    
Sbjct: 421 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPQPSALPGLDTKHIVGIACGPAQSFA 480

Query: 175 WLSSVE 180
           W S  E
Sbjct: 481 WSSCSE 486



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A AG  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 1128 ANAGSLIRKKASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 1185

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 1186 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPLPRQITALSNYVVKKVA 1241

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 1242 VHSGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 1299

Query: 395  HSLVIV 400
            HS  I 
Sbjct: 1300 HSAAIT 1305



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 91/226 (40%), Gaps = 41/226 (18%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            + P  ++ L+G  +  VA G      +A+  EG  ++WG  + G+LG G     + P  +
Sbjct: 1330 LKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNI 1389

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-------------IRNE- 150
              L+   + +   G   ++ +T+ G    +G    G+L   S             +RN+ 
Sbjct: 1390 ERLNGQGVCQIECGAQFSLALTKSGVVWTWGRGDFGELRPDSHIVQSGNVSDRMRVRNKG 1449

Query: 151  --IEPSPVRCLVS--EVTATACGADFTVWLSSVEGAS---------ILNAGLPQYGQLGH 197
              + P P   LVS  E+     G +    +SS  G           +   G   +GQ G+
Sbjct: 1450 ACLIPLPFFGLVSPREMGWEIVGIERNSGISSFCGQQGERRERQLEVYAWGDNDHGQQGN 1509

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
            GT                   +P  +  L G+ I +VACG++H+VA
Sbjct: 1510 GTTT--------------VNRKPTLVQGLEGQKITRVACGSSHSVA 1541



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 25/47 (53%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
            Y WG N+ GQ G+G      +PT+V  L   KI +   G SH+V  T
Sbjct: 1497 YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 1543



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 2164 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 2220

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 2221 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKVAVNSGGKHCLALSSEGEV 2279

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ V+ L G+ V+ +A G  HS  I 
Sbjct: 2280 YSWGEAEDGKLGHG--NRSPCDRPRVVESLRGIEVVDIAAGGAHSACIT 2326


>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
          Length = 1082

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 276 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 335

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 336 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 395

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 396 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 441

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 442 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 501

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
                I+ GS++  C    G++Y WG
Sbjct: 502 ----AIATGSLHCVCCTEDGEVYTWG 523



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 201 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 260

Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
              G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 261 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 318

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 319 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 364

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
           G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 365 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 422

Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
            GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 423 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 481

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                   P++V  L+G  VI++A G  H
Sbjct: 482 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 509



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +
Sbjct: 247 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 306

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
           G   ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   
Sbjct: 307 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 364

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
           G  +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ + 
Sbjct: 365 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLT 410

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G 
Sbjct: 411 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 466

Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           +Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG   
Sbjct: 467 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 526

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 527 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 563



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 122/292 (41%), Gaps = 38/292 (13%)

Query: 124 VVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           +++  G+   +GW  N  GQLG         P+P   L +       G + T++  + +G
Sbjct: 194 ILSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG 253

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTN 239
                                Y           E+   P  + ++    I KVA   G  
Sbjct: 254 KLYATG---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGK 298

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H +A+ S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C
Sbjct: 299 HCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSAC 354

Query: 300 TAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADS 349
               G LY WGK +      ++ +D + PK +  L G   R +D    SG+       D 
Sbjct: 355 VTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDD 412

Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             + SWG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 413 DTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 462



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 428 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 484

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 485 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 544

Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
             L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 545 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 585


>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
            harrisii]
          Length = 4483

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3781 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3840

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+   +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 3841 SLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 3900

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3901 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3946

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3947 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4006

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4007 ----AIATGSLHCVCCTEDGEVYTWG 4028



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 2763 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 2820

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 2880

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2881 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2940

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2941 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2986

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2987 FRLGHGTDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3034



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2725 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 2782

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 2783 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKP 2842

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 2843 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 2889

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2890 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2946

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2947 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3002

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3003 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3060

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3061 QKITRVACGSSHSV 3074



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3706 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKLYATGY 3765

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3766 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3823

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G +YTW
Sbjct: 3824 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTW 3869

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 3870 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 3927

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3928 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3986

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3987 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4014



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  A+G  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2696 IRKKASGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2749

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 2809

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
              + L +V+G  I + G    G+LGH +    +              +PR I AL  + I
Sbjct: 2810 HAMAL-TVDG-KIFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2853

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 2854 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2909

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 2910 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2969

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 2970 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3027

Query: 403  TNV 405
              V
Sbjct: 3028 GQV 3030



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3753 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3812

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3813 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLYTWG 3870

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 3871 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 3916

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 3917 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 3972

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3973 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4032

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4033 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4068



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 121/286 (42%), Gaps = 38/286 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3704 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADG-KLYA 3762

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3763 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3808

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 3809 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----IAAGGAHSACITAAG 3864

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 3865 DLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 3922

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ +
Sbjct: 3923 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3966



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2838 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 2895

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2896 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2955

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 2956 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVH 3013

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3014 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3073

Query: 242  VA 243
            VA
Sbjct: 3074 VA 3075



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 76/169 (44%), Gaps = 8/169 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3933 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3989

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3990 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4049

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEY 203
              L   ++   ACG+  T+  S+ + A   NAG LP    + +    E+
Sbjct: 4050 AALQGKKINRVACGSAHTLAWSTSKPA---NAGKLPTQVPMEYNHLQEF 4095



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2994 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3051

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3052 PTLVQGLEGQKITRVACGSSHSVAWT 3077



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 14/88 (15%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YG+LG G  +   T              P+ I  L    +VKV CG+  +VA+   G VY
Sbjct: 419 YGKLGRGGSDGCKT--------------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY 464

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           +WG G   RLGH  ++    P+ ++  Q
Sbjct: 465 SWGKGDNQRLGHGTEEHVRYPKLLEGLQ 492



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 18/185 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2690 ANTGSLIRKKASGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2747

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 2748 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 2803

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 2804 VHSGGRHAMALTVDGKIFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 2861

Query: 395  HSLVI 399
            HS  I
Sbjct: 2862 HSAAI 2866



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3699 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPIQLIGGEQTLFAVT 3755

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3756 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3814

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I
Sbjct: 3815 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACI 3860



 Score = 37.7 bits (86), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 19/72 (26%), Positives = 37/72 (51%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           + G+ ++WG  + G+LG G       P ++ +L    + K   G   +V +T+DG   ++
Sbjct: 407 IFGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSW 466

Query: 135 GWNKHGQLGSGS 146
           G   + +LG G+
Sbjct: 467 GKGDNQRLGHGT 478


>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
            carolinensis]
          Length = 4839

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+   +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4198 SLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 3015 GKVYACGEATNGRLGL--GLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G   ++G  ++
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3132

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3193 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3239 FRLGHGTDVHVRKPQVVEGLRGKKIIH----VAVGALHCLAVTDTGQVYAWG 3286



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 169/374 (45%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3034

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3094

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     + + GL +YG+LGHG +            
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHGDNT----------- 3141

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3142 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3199 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3254

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3255 VEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3312

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3313 QKITRVACGSSHSV 3326



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + +++ P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 477 AYNSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    IVKV+CG+  +VA+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     + AGS +        ++Y WG
Sbjct: 703 LLEGLQGEKVID----VVAGSTHCLALTEDSEVYSWG 735



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G +YTW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLYTW 4120

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            A G   +G+LG    SG++    + + +   V +  A   G    + L +V+G  + + G
Sbjct: 3019 ACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 3076

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3077 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAITSSG 3122

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +Y+WG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3123 ELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3178

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3179 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  +I VA G  H L + D   V
Sbjct: 3239 FRLGHG--TDVHVRKPQVVEGLRGKKIIHVAVGALHCLAVTDTGQV 3282



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLYTWG 4121

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4122 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGVVK----VECGSQFSVALTKSGAV 4223

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4284 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 150/372 (40%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N+  P +   L  + +  +A  C     + +   GR YT   N    LG         P
Sbjct: 438 ANVSGPIQCEGLASLGVTQIA--CAEKRFLILSRNGRVYTQAYNS-DILG---------P 485

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   I K  A     H + +   G   ++G    G+LG G      EP  +  L
Sbjct: 486 QLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISAL 545

Query: 160 V-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V   ACG+ ++  +++ EG  +   G   YG+LGHG+               
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGSS-------------- 589

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           E Q  P  +  L G  ++ V+CG+    T+AV   G V++WG G YG+LG         P
Sbjct: 590 EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + ++  Q  +++     +S GS  S      GQ+Y WGK  N        +   YPK L 
Sbjct: 650 KLIEKLQDLDIVK----VSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +  +    + +   P  +  L+  H
Sbjct: 706 GLQGEKVIDVVAGSTHCLALTEDSEVYSWGSND--QCQHFDTLRITKPDPTALPGLDSKH 763

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 764 IVGIACGPAQSF 775



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4013

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4014 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4059

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 4060 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----IAAGGAHSACITAAG 4115

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 4116 DLYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 4173

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4174 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGVGVVKVECGSQFSVALT 4218



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 119/265 (44%), Gaps = 30/265 (11%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG---------DTVP 535

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK +  L   ++  +  G+     +  D    SWG      LG+G   ++    PK ++ 
Sbjct: 649 PKLIEKLQDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLLEG 706

Query: 381 LEGMHVISVACGYGHSLVIVDRTNV 405
           L+G  VI V  G  H L + + + V
Sbjct: 707 LQGEKVIDVVAGSTHCLALTEDSEV 731



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  Y+WG  E G+LGHGD   + +P 
Sbjct: 3090 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLKPK 3147

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3148 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3208 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIIH 3265

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 242  VA 243
            V+
Sbjct: 3326 VS 3327



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L GV +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4184 RGGSDGCKV-PMKIDSLTGVGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 4301 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4341



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 61/257 (23%), Positives = 106/257 (41%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  KM+   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
               I K   G   +V +T+DG   ++G   + +LG G+  +   P  +  L  E V   
Sbjct: 656 QDLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDV 715

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
             G+  T  L+  E + + + G            N+      ++++    +P P A+  L
Sbjct: 716 VAGS--THCLALTEDSEVYSWG-----------SNDQCQHFDTLRI---TKPDPTALPGL 759

Query: 227 AGETIVKVACGTNHTVA 243
             + IV +ACG   + A
Sbjct: 760 DSKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   VA+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDIVKVSCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEKVIDVV 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + +P+ +  L S+ +   ACG A    
Sbjct: 717 AGSTHCLALTEDSEVYSWGSNDQCQHFDTLRITKPDPTALPGLDSKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  + K   G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2942 ANTGSLVRKKTSGLESVATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2999

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 3000 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNYVVKKVA 3055

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 3056 VHSGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 395  HSLVIV 400
            HS  I 
Sbjct: 3114 HSAAIT 3119



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4007 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112


>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
          Length = 1319

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 130/269 (48%), Gaps = 19/269 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            ++ +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP 
Sbjct: 829  SVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPR 888

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            ++  L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L   
Sbjct: 889  VIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH 948

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             V   ACG+     L   +  ++ + G   YG+LG G  +                  P 
Sbjct: 949  RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PM 994

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q  
Sbjct: 995  KIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGK 1054

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             V+     I+ GS++  C    G++Y WG
Sbjct: 1055 KVI----AIATGSLHCVCCTEDGEVYTWG 1079



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 757  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 816

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 817  GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 874

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 875  KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 920

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 921  GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 978

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 979  YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 1037

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 1038 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 1065



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 804  AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 863

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 864  EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 921

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 922  KGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 967

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 968  DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 1023

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 1024 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1083

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 1084 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 1119



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 755  GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 814

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 815  G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 859

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 860  SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 915

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 916  DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 973

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 974  WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 1018



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 93/191 (48%), Gaps = 16/191 (8%)

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +PR I AL  + I  +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V 
Sbjct: 5   KPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVL 64

Query: 279 QRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSG 330
             + V+     ++ GS ++   A    G ++ W     GKL   G +    P+ +  L+G
Sbjct: 65  LGHRVIQ----VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG 120

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAM---PKKVDILEGMHV 386
             +  ++ G         S  + +W    +G+  +G  G  ++ +   P  V  LEG  +
Sbjct: 121 QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKI 180

Query: 387 ISVACGYGHSL 397
             VACG  HS+
Sbjct: 181 TRVACGSSHSV 191



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 94/207 (45%), Gaps = 22/207 (10%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2   NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 59

Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 60  MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 119

Query: 161 SE-VTATACGADFTVWLSS---VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            + V    CGA F++ L+    V    +   G   +GQ G+GT                 
Sbjct: 120 GQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTT--------------V 165

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVA 243
             +P  +  L G+ I +VACG++H+VA
Sbjct: 166 NRKPTLVQGLEGQKITRVACGSSHSVA 192



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 984  RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1040

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 1041 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 1100

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
              L   +V   ACG+  T+  S+ + AS   L A +P +Y  L
Sbjct: 1101 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 1143



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 26/49 (53%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + Y WG N+ GQ G+G      +PT+V  L   KI +   G SH+V  T
Sbjct: 146 QVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWT 194



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 750 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 806

Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
           A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 807 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 865

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 866 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 912


>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
          Length = 1183

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 376 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 435

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 436 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 495

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 496 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 541

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 542 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 601

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
                I+ GS++  C    G++Y WG
Sbjct: 602 ----AIATGSLHCVCCTEDGEVYTWG 623



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 301 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 360

Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
              G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 361 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 418

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 419 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 464

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
           G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 465 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 522

Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
            GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 523 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 581

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                   P++V  L+G  VI++A G  H
Sbjct: 582 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 609



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 34/339 (10%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +
Sbjct: 347 FAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 406

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
           G   ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   
Sbjct: 407 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 464

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
           G  +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ + 
Sbjct: 465 GKGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLT 510

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G 
Sbjct: 511 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 566

Query: 306 LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           +Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG   
Sbjct: 567 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 626

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 627 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 663



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
           G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 299 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 358

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                           Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 359 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 403

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 404 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 459

Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
            LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 460 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 517

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 518 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 562



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 528 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 584

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 585 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 644

Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
             L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 645 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 685



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 294 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 350

Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
           A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 351 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 409

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 410 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 456


>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
          Length = 958

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 298 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 357

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 358 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 417

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 418 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 463

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 464 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 523

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
                I+ GS++  C    G++Y WG
Sbjct: 524 ----AIATGSLHCVCCTEDGEVYTWG 545



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 223 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 282

Query: 137 NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
              G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 283 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 340

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 341 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 386

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
           G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 387 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 444

Query: 310 -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
            GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 445 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 503

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                   P++V  L+G  VI++A G  H
Sbjct: 504 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 531



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
           AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 270 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 329

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
              ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 330 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 387

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
             +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 388 KGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 433

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
              V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 434 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 489

Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
           Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 490 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 549

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 550 GQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 585



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129 GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
           G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 221 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 280

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                           Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 281 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 325

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 326 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 381

Query: 305 QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
            LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 382 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 439

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 440 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 484



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 450 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 506

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 507 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 566

Query: 157 RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
             L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 567 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 607



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 216 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 272

Query: 301 AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
           A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 273 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 331

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 332 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 378


>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
          Length = 4777

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3970 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4029

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4030 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4089

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +   + + G   YG+LG G  +                  P  I 
Sbjct: 4090 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4135

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4136 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4195

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4196 ----AIATGSLHCVCCTEDGEVYTWG 4217



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 2973 GKIYACGEATNGRLGL--GLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKV 3030

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G   ++G  ++
Sbjct: 3031 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3090

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    ++ P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3091 GRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3150

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3151 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3196

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3197 FRLGHGTDVHVRKPQIVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3244



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 171/376 (45%), Gaps = 42/376 (11%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--- 93
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2935 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRLGLGLSS 2992

Query: 94   DKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
              IQ   P  +S LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  
Sbjct: 2993 GTIQI--PRQISALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCD 3050

Query: 152  EPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
            +P  +  L ++ +   ACG+  +  ++S     + + GL +YG+LGHG +          
Sbjct: 3051 KPRLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHGDNT--------- 3099

Query: 211  KLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                  Q RP+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    + 
Sbjct: 3100 -----TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEG 3154

Query: 269  EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP 324
              +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP
Sbjct: 3155 CNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKP 3210

Query: 325  LM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
             +   L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  L
Sbjct: 3211 QIVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGL 3268

Query: 382  EGMHVISVACGYGHSL 397
            EG  +  VACG  HS+
Sbjct: 3269 EGQKITRVACGSSHSV 3284



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 144/327 (44%), Gaps = 35/327 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L    I  +AA     H +A+   G  Y+WG  + G+LGHGD    + P ++
Sbjct: 433 LAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALI 492

Query: 105 SELS----KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           +  S      ++ +   G +++  VT DG    +G   +G+LG GS  +   P  V  L 
Sbjct: 493 TTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTPMLVTALK 552

Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   ACG+     L+  E   + + G   YG+LG G  +   T              
Sbjct: 553 GQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 598

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +  L    IVKV CG+  +VA+   G VYTWG G   RLGH   +    P+ +D  Q
Sbjct: 599 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSLQ 658

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---KLKNNGDDWMY-----PKPLMDLSGW 331
              V+     I+ GS +       G+++ WG   KL++   D ++     PK L  L+  
Sbjct: 659 GKKVVD----IAVGSTHCLALTDEGEVHSWGSNDKLQHF--DTLFPNKKQPKALPGLNSK 712

Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQ 358
           ++  +  G    F  A SSC  W   Q
Sbjct: 713 HIVGISCGPGQSF--AWSSCSEWSVGQ 737



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3895 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3954

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3955 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4012

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 4013 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4058

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ VD  Q + V+  +    +G   + C      ++ W    
Sbjct: 4059 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 4116

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4117 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4175

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4176 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4203



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 155/349 (44%), Gaps = 39/349 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            A  +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G
Sbjct: 2916 AASIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 2973

Query: 130  NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
               A G   +G+LG    SG+I+   + S +   V +  A   G    + L +V+G  + 
Sbjct: 2974 KIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 3031

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ 
Sbjct: 3032 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3077

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +Y+WG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    
Sbjct: 3078 SSGELYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDE 3133

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG 
Sbjct: 3134 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3193

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3194 GDYFRLGHG--TDVHVRKPQIVEGLRGKKIVHVAVGALHCLAVTDSGQV 3240



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 155/355 (43%), Gaps = 36/355 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3942 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4001

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4002 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELFTWG 4059

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ VACG+    T+ +  
Sbjct: 4060 KGRYGRLGHG--------DS------EDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTD 4105

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4106 DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4161

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4162 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4221

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV--IVDRTNVGERLDQV 412
            G+LG G     +   P+ V  L+G  +  VACG  H+L       TN G+   QV
Sbjct: 4222 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKMPAQV 4274



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 142/331 (42%), Gaps = 40/331 (12%)

Query: 101 PTIVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           P ++  LS  KI K  A     H + ++  G   ++G    G+LG G      EP+ +  
Sbjct: 435 PMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVYSWGCGDGGRLGHGDATYLEEPALITT 494

Query: 159 LV-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
                   +V   ACG+ ++  +++     +   G   YG+LGHG+  +  T        
Sbjct: 495 FSGKQTGKQVVQIACGSTYSAAVTA--DGELYTWGRGNYGRLGHGSSEDVTT-------- 544

Query: 214 YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
                 P  + AL G+ +V VACG+    T+AV   G V++WG G YG+LG         
Sbjct: 545 ------PMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 598

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDD--WMYPKPL 325
           P+ V+  Q  +++     +  GS  S      GQ+Y WGK  N    +G D    YPK L
Sbjct: 599 PKLVEKLQDLDIVK----VCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPKLL 654

Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
             L G  +  +  G+ H     D   + SWG     +L +      +   PK +  L   
Sbjct: 655 DSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSND--KLQHFDTLFPNKKQPKALPGLNSK 712

Query: 385 HVISVACGYGHSLV--IVDRTNVGERLDQVI 413
           H++ ++CG G S         +VG+R+  V+
Sbjct: 713 HIVGISCGPGQSFAWSSCSEWSVGQRVPFVV 743



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L GV++  +AAG    H   +   G  +TWG+   G+LGHGD   + +P +V  
Sbjct: 4025 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4082

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 4083 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4142

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4143 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4200

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ I +VACG+ HT+A
Sbjct: 4201 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4258



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  Y+WG  E G+LGHGD   + RP 
Sbjct: 3048 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLRPK 3105

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3106 LVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3165

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3166 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGLRGKKIVH 3223

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3224 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3283

Query: 242  VA 243
            VA
Sbjct: 3284 VA 3285



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 66/144 (45%), Gaps = 5/144 (3%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4122 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4178

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4179 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4238

Query: 157  RCLV-SEVTATACGADFTV-WLSS 178
              L   ++   ACG+  T+ W +S
Sbjct: 4239 AALQGKKINRVACGSAHTLAWSTS 4262



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/261 (22%), Positives = 106/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE   ++   +GK+ G ++  + CGST   AV              GR       ++ +P
Sbjct: 486 LEEPALITTFSGKQTGKQVVQIACGSTYSAAVTADGELYTWGRGNYGRLGHGSSEDVTTP 545

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G  +  VA G      +AV   G+ ++WG  + G+LG G       P +V +L
Sbjct: 546 MLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 605

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               I K   G   +V +T+DG    +G   + +LG G+  +   P              
Sbjct: 606 QDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRYPK------------- 652

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA-----YEAQPRPRA 222
                   L S++G  +++  +     L    + E ++  S+ KL      +  + +P+A
Sbjct: 653 -------LLDSLQGKKVVDIAVGSTHCLALTDEGEVHSWGSNDKLQHFDTLFPNKKQPKA 705

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV ++CG   + A
Sbjct: 706 LPGLNSKHIVGISCGPGQSFA 726



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3204 DVHVRKPQIVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3261

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3262 PTLVQGLEGQKITRVACGSSHSVAWT 3287



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            AG    K + G     ++ +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2902 AGSLARKKSSGLESAASIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2958

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2959 ---VAGGSKSLFAVTVEGKIYACGEATNGRLGLGLSSGTIQIPRQISALSNYVVKKVAVH 3015

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3016 SGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3073

Query: 397  LVIV 400
              I 
Sbjct: 3074 AAIT 3077



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 46/220 (20%), Positives = 76/220 (34%), Gaps = 61/220 (27%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR-------------------- 280
            T++    G +Y WG    G+LG  E     VP   +                        
Sbjct: 3888 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADG 3947

Query: 281  ------------------------------NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                                           +V   +  +++G  +    +  G++Y WG
Sbjct: 3948 KLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWG 4007

Query: 311  KLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
            + ++      N      P+ +  L G  +  + +G  H   + A     +WG  +YG LG
Sbjct: 4008 EAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLG 4067

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYG--HSLVIVD 401
            +G    +    PK VD L+G  VI VACG G   +L + D
Sbjct: 4068 HG--DSEDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTD 4105


>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
           vinifera]
 gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
          Length = 445

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 108/358 (30%), Positives = 165/358 (46%), Gaps = 35/358 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  +++     
Sbjct: 18  VLLISAG--ASHSVALLSGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +E    + ++GW   G+LG G+  +   P P++ L    +   ACG      
Sbjct: 76  GADHTTAYSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIACGDSHC-- 133

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG GT     T+DS V         P+ I A  G ++  VA
Sbjct: 134 LAVTMDGEVQSWGRNQNGQLGLGT-----TEDSLV---------PQKIQAFQGVSVKMVA 179

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  VP +V   +   ++     ++ G  
Sbjct: 180 AGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVKMVK----VACGWR 235

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVG--A 347
           ++   +  G LY +G  K     +GD  D + P  L  L   NL    SG   H +   +
Sbjct: 236 HTISVSSSGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQE-NLISEISGGWRHTMALTS 294

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           D     WG  ++G++G G      S  P +V       V+ ++CG+ H+L + +R NV
Sbjct: 295 DGKLYGWGWNKFGQVGVGDNVDHCS--PVQVKFPHEQKVVHISCGWRHTLAVTERQNV 350



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 23/286 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L G+ I+ +A  C   HC+AV ++G   +WGRN+ GQ
Sbjct: 95  WGDFGRLGHGNSSDLFTPQPIKALHGLRIKQIA--CGDSHCLAVTMDGEVQSWGRNQNGQ 152

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG    +GW ++G LG G   +
Sbjct: 153 LGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRND 212

Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +   ++   ACG   T+ +SS  G  +   G  +YGQLGHG          
Sbjct: 213 RLVPEKVSTVEGVKMVKVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------- 261

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL    I +++ G  HT+A+ S G +Y WG+  +G++G  +  D
Sbjct: 262 -----FEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVD 316

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P +V       V+     IS G  ++        ++ WG+  N
Sbjct: 317 HCSPVQVKFPHEQKVVH----ISCGWRHTLAVTERQNVFSWGRGTN 358



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 79/176 (44%), Gaps = 11/176 (6%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P +L  L    I  ++ G    H +A+  +G+ Y WG N+ GQ+G GD +    P  V
Sbjct: 266 LTPHKLEALQENLISEISGGWR--HTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 323

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-- 162
               + K+     G  HT+ VTE  N  ++G   +GQLG G   +   P  +  L ++  
Sbjct: 324 KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSADGS 383

Query: 163 -----VTATACGADFTVWLSSVEGASIL--NAGLPQYGQLGHGTDNEYNTKDSSVK 211
                 T+    +   +W+S  E  +++    G  Q G    G  N+ +  +S VK
Sbjct: 384 GGQQIETSKVDPSTGRIWVSPSERYAVVPDETGSTQTGVSVKGNGNDASVPESDVK 439


>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
            boliviensis]
          Length = 4472

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SPT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG +   DRP ++ 
Sbjct: 3665 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 3724

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3725 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3784

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3785 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PTKID 3830

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3831 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3890

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 3891 ----AIATGSLHCVCCTEDGEVYTWG 3912



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2649 GKVYACGEATNGRLGL--GLSSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKV 2706

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2707 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2766

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2767 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2826

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2827 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2872

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2873 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 2920



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2611 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 2668

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2669 GTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 2728

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 2729 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 2775

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2776 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2832

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            VP+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2833 VPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2888

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 2889 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 2946

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 2947 QKITRVACGSSHSV 2960



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3590 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3649

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3650 GAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3707

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG+ +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3708 KLGHGSRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3753

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 3754 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3811

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3812 YGKLGRGGSDGCKVPTKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3870

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3871 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 3898



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 127/277 (45%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 165 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 224

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P  +S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 225 EEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 284

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 285 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 336

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 337 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 390

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 391 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 423



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 159/365 (43%), Gaps = 47/365 (12%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S   +   V    + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2582 IRKKAAGLESTATIRTKV----FVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2635

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTATACG 169
              G      VT +G   A G   +G+LG G + +   P P +       +V +V   + G
Sbjct: 2636 AGGSKSLFAVTVEGKVYACGEATNGRLGLG-LSSGTVPIPRQITALSSYMVKKVAVHSGG 2694

Query: 170  ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
               T    +V+G  + + G    G+LGH +    +              +PR I AL  +
Sbjct: 2695 RHATAL--TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTK 2737

Query: 230  TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
             I  +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     
Sbjct: 2738 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ---- 2793

Query: 290  ISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNM 341
            ++ GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G  
Sbjct: 2794 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 2853

Query: 342  HHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                   S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + 
Sbjct: 2854 FSLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 2911

Query: 401  DRTNV 405
            D   V
Sbjct: 2912 DSGQV 2916



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3637 AVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3696

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG GS      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3697 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 3754

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 3755 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3800

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 3801 DDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGVVK----VECGSQFSVALTKSGAV 3856

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3857 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3916

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 3917 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3952



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 123/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 169 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 219

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+AI+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 220 DTVPLE-----EPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 274

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 275 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 332

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 333 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 388

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 389 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 419



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3588 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3647

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3648 G---------------YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLAL 3692

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3693 SSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3748

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3749 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 3806

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 3807 WGDGDYGKLGRG--GSDGCKVPTKIDSLTGLGVVKVECGSQFSVALT 3851



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 104/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+++  VAAG    H   V   G  YTWG+   G+LGH D   + +P +V  
Sbjct: 3720 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 3777

Query: 107  LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P+ +  L    V
Sbjct: 3778 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSLTGLGV 3837

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 3838 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 3895

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ + +VACG+ HT+A
Sbjct: 3896 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3953



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2724 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 2781

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2782 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLN 2841

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 2842 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2899

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 2900 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2959

Query: 242  VA 243
            VA
Sbjct: 2960 VA 2961



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 4/148 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V PT++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3817 RGGSDGCKV-PTKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3873

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3874 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3933

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGAS 183
              L   +V   ACG+  T+  S+ +  S
Sbjct: 3934 AALQGKKVNRVACGSAHTLAWSTSKPTS 3961



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2880 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2937

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 2938 PTLVQGLEGQKITRVACGSSHSVAWT 2963



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 131 PIQCEGLANLGVTQIACAEKRFLILSRSGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 190

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 191 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGST 250

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 251 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 308

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 309 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 362



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K +   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 224 LEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 283

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 284 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 343

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 344 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 390

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 391 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 443

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 444 LPGLDTKHIVGIACGPAQSFA 464



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G   T  + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2578 SGSLIRKKAAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2634

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2635 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVH 2691

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 2692 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2749

Query: 397  LVIV 400
              + 
Sbjct: 2750 AALT 2753



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3583 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3639

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3640 A-DGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3698

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 3699 YSWGEAEDGKLGHG--SRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 3745


>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
          Length = 4835

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4028 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4087

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4088 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4147

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4148 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4193

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4194 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4253

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C +  G++Y WG
Sbjct: 4254 ----AIATGSLHCVCCSEDGEVYTWG 4275



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3010 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3067

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3068 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3127

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3128 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3187

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3188 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3233

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3234 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3281



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2972 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3029

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3030 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3089

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3090 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3136

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3137 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3193

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3194 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3249

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3250 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3307

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3308 QKITRVACGSSHSV 3321



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3953 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4012

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4013 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4070

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4071 KLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4116

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4117 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4174

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4175 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4233

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4234 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4261



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  +VA+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2943 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2996

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2997 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3056

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3057 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3100

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3101 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3156

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3157 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3216

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3217 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3274

Query: 403  TNV 405
              V
Sbjct: 3275 GQV 3277



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4000 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4059

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L  +EV   A G   +  +++     +   G
Sbjct: 4060 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA--AGDLYTWG 4117

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4118 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4163

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4164 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4219

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4220 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4279

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4280 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4315



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC         +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3951 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4010

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4011 G---------------YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4055

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4056 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4111

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4112 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4169

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4170 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4214



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3085 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3142

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3143 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3202

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3203 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3260

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3261 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3320

Query: 242  VA 243
            VA
Sbjct: 3321 VA 3322



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4180 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4236

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  +EDG    +G N  GQLG G+      P  V
Sbjct: 4237 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4296

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4297 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPVQVPMEYN 4337



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3241 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3298

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3299 PTLVQGLEGQKITRVACGSSHSVAWT 3324



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   +V +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2939 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2995

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2996 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3052

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3053 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3110

Query: 397  LVIV 400
              + 
Sbjct: 3111 AALT 3114



 Score = 37.7 bits (86), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3946 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 4002

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4003 A-DGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4061

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G  V+ VA G  HS  + 
Sbjct: 4062 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4108


>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 1620 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 1679

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 1680 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 1739

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 1740 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 1785

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 1786 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 1845

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 1846 ----AIATGSLHCVCCTEDGEVYTWG 1867



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 141/312 (45%), Gaps = 25/312 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 604 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 661

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 662 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 721

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 722 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 781

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 782 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 827

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
            RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG      + 
Sbjct: 828 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWGDNDHGQQG 883

Query: 315 NGDDWMYPKPLM 326
           NG   +  KP +
Sbjct: 884 NGTTTVNRKPTL 895



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38  GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
           G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 566 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 623

Query: 96  IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 624 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 683

Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
             +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 684 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 730

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
               Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 731 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 787

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
           +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 788 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 843

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
           +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 844 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 901

Query: 384 MHVISVACGYGHSL 397
             +  VACG  HS+
Sbjct: 902 QKITRVACGSSHSV 915



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 1545 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1604

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 1605 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 1662

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 1663 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 1708

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 1709 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 1766

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 1767 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 1825

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 1826 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 1853



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
           IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 537 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 590

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
             G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 591 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 650

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
               L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 651 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 694

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
             +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 695 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 750

Query: 292 AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
            GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 751 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 810

Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 811 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 868

Query: 403 TNV 405
             V
Sbjct: 869 GQV 871



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 1592 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1651

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 1652 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 1709

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 1710 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 1755

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 1756 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 1811

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 1812 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1871

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 1872 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 1907



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 1543 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1602

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 1603 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 1647

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 1648 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 1703

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 1704 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 1761

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 1762 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 1806



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 679 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 736

Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 737 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 796

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
            + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 797 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 854

Query: 205 ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                       DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 855 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 914

Query: 242 VA 243
           VA
Sbjct: 915 VA 916



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 1772 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1828

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 1829 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 1888

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
              L   +V   ACG+  T+  S+ + AS   L A +P +Y  L
Sbjct: 1889 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 1931



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 835 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 892

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
           PT+V  L   KI +   G SH+V  T
Sbjct: 893 PTLVQGLEGQKITRVACGSSHSVAWT 918



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
           +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 533 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 589

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 590 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 646

Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 647 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 704

Query: 397 LVIV 400
             + 
Sbjct: 705 AALT 708



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 1538 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 1594

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 1595 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1653

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 1654 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 1700


>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
 gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
          Length = 4837

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4090 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C +  G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCSEDGEVYTWG 4277



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4015 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4118

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  +VA+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276

Query: 403  TNV 405
              V
Sbjct: 3277 GQV 3279



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L  +EV   A G   +  +++     +   G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA--AGDLYTWG 4119

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4120 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4221

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4281

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4282 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 120/271 (44%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC         +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4012

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4013 G---------------YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4057

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4058 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4113

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4171

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4172 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  +EDG    +G N  GQLG G+      P  V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPVQVPMEYN 4339



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   +V +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 397  LVIV 400
              + 
Sbjct: 3113 AALT 3116



 Score = 38.1 bits (87), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 4004

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4005 A-DGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G  V+ VA G  HS  + 
Sbjct: 4064 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4110


>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
          Length = 4836

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G                +    P  I 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--------------GSDGSKVPMKID 4194

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG      L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACGT    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4176 YGKLGRGGSDGSKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLG   ++    P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ G+ ++   A    G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGTRDAQTLALTDEGLV 3175

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4118

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 122/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4010

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4011 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4112

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4170

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G   S +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4171 WGDGDYGKLGRG--GSDGSKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 688 QRLGLG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG+ V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4181 RGGSDGSKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGLGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDSKHIVGIACGPAQSFA 776



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)

Query: 228  GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            G  I K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+   
Sbjct: 2942 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2997

Query: 288  AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + S
Sbjct: 2998 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3055

Query: 339  GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS 
Sbjct: 3056 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 398  VIV 400
             + 
Sbjct: 3114 ALT 3116



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4004 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105


>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
          Length = 5093

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4286 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4345

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4346 SLRGIEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4405

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4406 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4451

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4452 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4511

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4512 ----AIATGSLHCVCCTEDGEVYTWG 4533



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3272 GKVYACGEATNGRLGL--GLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 3329

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3330 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3389

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3390 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3449

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3450 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3495

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3496 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3543



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 170/374 (45%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 3234 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3291

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  V+ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3292 GTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3351

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG        D++ +L
Sbjct: 3352 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL 3401

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                  +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3402 ------KPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3455

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3456 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3511

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3512 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVHGLEG 3569

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3570 QKITRVACGSSHSV 3583



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 4211 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4270

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4271 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4328

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +  VA G  H+  V + G +YTW
Sbjct: 4329 KLGHGNRSPCD--------------RPRVIESLRGIEVADVAAGGAHSACVTAAGDLYTW 4374

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4375 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4432

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4433 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4491

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4492 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4519



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 737 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 796

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 797 EEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 856

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 857 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 908

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 909 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 962

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 963 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 995



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 39/349 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            A  +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G
Sbjct: 3215 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3272

Query: 130  NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
               A G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + 
Sbjct: 3273 KVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATAL-TVDG-KVF 3330

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ 
Sbjct: 3331 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALT 3376

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    
Sbjct: 3377 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 3432

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG 
Sbjct: 3433 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3492

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3493 GDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3539



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4258 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4317

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4318 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVADVAAGGAHSACVTA--AGDLYTWG 4375

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4376 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4421

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4422 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4477

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4478 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4537

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4538 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4573



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 121/271 (44%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 741 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 791

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+      AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 792 DTVPLE-----EPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 846

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 847 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 904

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 905 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 960

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 961 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 991



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 4209 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4268

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4269 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4313

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V    A ++AG  +S+C    G
Sbjct: 4314 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV----ADVAAGGAHSACVTAAG 4369

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4370 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4427

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4428 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4472



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3347 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3404

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3405 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3464

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3465 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3522

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3523 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQKITRVACGSSHS 3582

Query: 242  VA 243
            VA
Sbjct: 3583 VA 3584



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4438 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4494

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4495 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4554

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4555 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 4595



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3503 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3560

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3561 PTLVHGLEGQKITRVACGSSHSVAWT 3586



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 703 PIQCEGLASLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 762

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 763 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGST 822

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 823 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 880

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 881 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 934



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4    LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
            LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 796  LEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 855

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
              +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 856  MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 915

Query: 108  SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
                + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 916  QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 962

Query: 168  CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                    L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 963  -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 1015

Query: 223  IAALAGETIVKVACGTNHTVA 243
            +  L  + IV +ACG   + A
Sbjct: 1016 LPGLDTKHIVGIACGPAQSFA 1036



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K   G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 3201 SGSLIRKKPSGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 3257

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 3258 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVH 3314

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3315 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3372

Query: 397  LVIV 400
              + 
Sbjct: 3373 AALT 3376


>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Gorilla gorilla gorilla]
          Length = 4586

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3779 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3838

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3839 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3898

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3899 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3944

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3945 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4004

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4005 ----AIATGSLHCVCCTEDGEVYTWG 4026



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2763 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2820

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2821 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2880

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2881 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2940

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2941 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2986

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2987 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3034



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2725 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 2782

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2783 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 2842

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 2843 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 2889

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2890 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2946

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2947 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3002

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3003 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3060

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3061 QKITRVACGSSHSV 3074



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G    + VT DG   A G+
Sbjct: 3704 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYATGY 3763

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3764 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3821

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3822 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3867

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 3868 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3925

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3926 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3984

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3985 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4012



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2696 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2749

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2809

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 2810 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2853

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 2854 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2909

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 2910 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2969

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 2970 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3027

Query: 403  TNV 405
              V
Sbjct: 3028 GQV 3030



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   ++  +AA     H +A+   G  Y+WG  +  +LGHGD +  
Sbjct: 453 AYNSDTLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPL 512

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 513 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 572

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 573 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 624

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 625 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 678

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 679 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 711



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 149/339 (43%), Gaps = 34/339 (10%)

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
            +AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +
Sbjct: 3750 LAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSE 3809

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
            G   ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   
Sbjct: 3810 GEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTW 3867

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
            G  +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ + 
Sbjct: 3868 GKGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLT 3913

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
                V++WG G YG+LG        VP ++D      V+     +  GS  S      G 
Sbjct: 3914 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGA 3969

Query: 306  LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
            +Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG   
Sbjct: 3970 VYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4029

Query: 359  YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
             G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4030 EGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4066



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 62/199 (31%), Positives = 96/199 (48%), Gaps = 19/199 (9%)

Query: 220 PRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +DE +P  V
Sbjct: 515 PKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 574

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPK---PLM 326
              +   V+  +    +G   +      GQ++ W     GKL   G D    PK    L 
Sbjct: 575 AGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 632

Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           DL    +RC    ++   +  D    SWG      LG+G   ++    PK ++ L+G  V
Sbjct: 633 DLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLLEGLQGKKV 688

Query: 387 ISVACGYGHSLVIVDRTNV 405
           I VA G  H L + + + V
Sbjct: 689 IDVAAGSTHCLALTEDSEV 707



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T+   + +G     
Sbjct: 3702 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVTADGKLYAT 3761

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3762 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3806

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3807 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3862

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3863 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 3920

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 3921 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3965



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2838 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 2895

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2896 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2955

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 2956 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3013

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3014 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3073

Query: 242  VA 243
            VA
Sbjct: 3074 VA 3075



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3931 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3987

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3988 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4047

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4048 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4088



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2994 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3051

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3052 PTLVQGLEGQKITRVACGSSHSVAWT 3077



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 44/274 (16%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 512 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 571

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 572 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 631

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 632 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 678

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 679 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 731

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           +  L  + IV +ACG   + A  S    Y W  G
Sbjct: 732 LPGLDTKHIVGIACGPAQSSAGSSX---YEWSMG 762



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2692 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2748

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2749 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2805

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 2806 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2863

Query: 397  LVIV 400
              + 
Sbjct: 2864 AALT 2867



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3697 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLLAVT 3753

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3754 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3812

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 3813 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3855


>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
          Length = 4814

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4007 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4066

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4067 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4126

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4127 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4172

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4173 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4232

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4233 ----AIATGSLHCVCCTEDGEVYTWG 4254



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2989 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3046

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3047 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3106

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3107 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3166

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3167 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3212

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3213 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3260



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2951 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3008

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3009 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3068

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3069 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3115

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3116 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3172

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3173 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3228

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3229 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3286

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3287 QKITRVACGSSHSV 3300



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3932 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3991

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3992 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4049

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4050 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4095

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4096 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4153

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4154 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4212

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4213 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4240



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2922 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2975

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2976 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3035

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3036 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3079

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3080 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3135

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3136 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3195

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3196 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3253

Query: 403  TNV 405
              V
Sbjct: 3254 GQV 3256



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 454 AYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 513

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 514 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 573

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 574 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 625

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 626 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 679

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 680 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 712



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3979 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4039 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4096

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4097 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4142

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4143 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4198

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4199 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4258

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4259 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4294



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 458 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 508

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 509 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 563

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 564 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 621

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 622 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 677

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 678 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 708



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3930 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3988

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3989 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4034

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4035 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4090

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4091 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4148

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4149 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4193



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3064 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3121

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3122 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3181

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3182 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3239

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3240 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3299

Query: 242  VA 243
            VA
Sbjct: 3300 VA 3301



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4159 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4215

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4216 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4275

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4276 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4316



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3220 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3277

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3278 PTLVQGLEGQKITRVACGSSHSVAWT 3303



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 420 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAH 479

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 480 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 539

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 540 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 597

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 598 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 651



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 513 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 572

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 573 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 632

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 633 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 679

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 680 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 732

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 733 LPGLDTKHIVGIACGPAQSFA 753



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2918 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2974

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2975 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3031

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3032 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3089

Query: 397  LVIV 400
              + 
Sbjct: 3090 AALT 3093



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3925 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3981

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3982 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4040

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4041 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4087


>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
          Length = 4836

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 129/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4089 SLRGTEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4148

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4149 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C +  G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCSEDGEVYTWG 4276



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4014 GAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGTEVVDVAAGGAHSACVTAAGDLYTW 4117

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2945 IRRKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276

Query: 403  TNV 405
              V
Sbjct: 3277 GQV 3279



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L  +EV   A G   +  +++     +   G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDVAAGGAHSACVTA--AGDLYTWG 4118

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4164

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDE 4280

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4011

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4012 G---------------YGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----VAAGGAHSACVTAAG 4112

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4170

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4171 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                 V 
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  +EDG    +G N  GQLG G+      P  V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPVQVPMEYN 4338



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I + A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2941 SGSLIRRKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 397  LVIV 400
              + 
Sbjct: 3113 AALT 3116



 Score = 37.7 bits (86), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 4003

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4004 A-DGKLYATGYGAGGRLGVGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G  V+ VA G  HS  + 
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGTEVVDVAAGGAHSACVT 4109


>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
            vitripennis]
          Length = 4752

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 166/373 (44%), Gaps = 68/373 (18%)

Query: 27   STCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
            +T + A+GR   G +D  +V PT L  +  V I+ VA      HC+A+  EG  Y+WG  
Sbjct: 3950 ATGYGALGRLGTGGVDSVMV-PTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEG 4008

Query: 86   ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
            + G+LGHG++I  DRP ++  L   +I     G  H+  ++  G    +G  ++G+LG G
Sbjct: 4009 DDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAGWLYTWGKGRYGRLGHG 4068

Query: 146  SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
               ++++P+ V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +   
Sbjct: 4069 DSDDQLKPTVVTALQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCK 4128

Query: 205  TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
                           P  I +LAG  +VKV CG+  +VA+   G VYTWG G Y RLGH 
Sbjct: 4129 V--------------PMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 4174

Query: 265  EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
                   PR+V   Q   ++     I+ GS++    +  G++Y WG    + D+      
Sbjct: 4175 TDDHVRRPRKVSALQGKKIVS----IATGSLHCVACSDKGEVYTWG----DNDE------ 4220

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
                                               G+LG G    + S  P+ V  L+G 
Sbjct: 4221 -----------------------------------GQLGDGTTHAQQS--PRLVHALQGK 4243

Query: 385  HVISVACGYGHSL 397
            ++  VACG  H+L
Sbjct: 4244 NITRVACGSAHTL 4256



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/342 (29%), Positives = 152/342 (44%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P     LS  +  +   G      VT DG   A
Sbjct: 3891 DGSGAIYGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQLAGGEQTLFAVTADGKVYA 3950

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG+G + + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 3951 TGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4008

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG    Y+              RP+ I AL G  IV +ACG +H+ A+ S G++
Sbjct: 4009 DDGKLGHGNRITYD--------------RPKLIEALLGTEIVDIACGGHHSAAISSAGWL 4054

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH +  D+  P  V   Q   V+  +    +G   + C      ++ W 
Sbjct: 4055 YTWGKGRYGRLGHGDSDDQLKPTVVTALQGYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4112

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG
Sbjct: 4113 DGDYGKLGRGGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4172

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  ++S+A G  H +   D+  V
Sbjct: 4173 HG--TDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEV 4212



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 159/369 (43%), Gaps = 40/369 (10%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGR 78
            G+L  CG    +    R G  D N V   +  P +    I+ VA      H +A+  +G+
Sbjct: 2974 GKLYACG----EGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGK 3029

Query: 79   CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
             ++WG  E G+LGHG+++  D+P ++  L   +I+    G  H+  +  +G    +G  +
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWGLGE 3089

Query: 139  HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            +G+LG G     ++P  V  LV + V   ACG+     ++  E  S+ + G   +G+LG 
Sbjct: 3090 YGRLGHGDTTTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWGDGDFGKLGR 3149

Query: 198  -GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G+D  Y+               P  +  L G  +V+V CG   ++A+   G V+TWG G
Sbjct: 3150 GGSDGCYS---------------PLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKG 3194

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----L 312
             Y RLGH        P  V+  +   V+     ++ G+++       GQ+Y WG      
Sbjct: 3195 DYFRLGHGNDHHVRRPTLVEGLRGKKVVH----VAVGALHCLAVTDAGQVYAWGDNDHGQ 3250

Query: 313  KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS 372
            + NG   +  KP +      +  ++   ++      S  I+W       LG     Q+  
Sbjct: 3251 QGNGSTMVNRKPSL------VHNLEDAKVNRVACGSSHSIAWVLTDQPTLG----NQEPV 3300

Query: 373  AMPKKVDIL 381
              P   D L
Sbjct: 3301 TFPTAKDPL 3309



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 146/336 (43%), Gaps = 38/336 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     VV+++G   A G  
Sbjct: 2925 YVWGLNDKDQLGGLKGSKIKL--PVHSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 2982

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP P+  L   + +  A   G    + L+  +   + + G  + G+
Sbjct: 2983 TNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 3040

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG     +              +PR I AL  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 3041 LGHGNRVSLD--------------KPRLIEALKSKRIRDIACGSGHSAAIASNGELYTWG 3086

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +      P+ VD      V+     ++ GS ++   A    G +Y W   
Sbjct: 3087 LGEYGRLGHGDTTTHLKPKLVDALVGQRVIQ----VACGSRDAQTMALTEDGSVYSWGDG 3142

Query: 310  --GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              GKL   G D  Y P P+  L+G  +  ++ G            + +WG   Y  LG+G
Sbjct: 3143 DFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3202

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                     P  V+ L G  V+ VA G  H L + D
Sbjct: 3203 --NDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTD 3236



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 165/350 (47%), Gaps = 36/350 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P  +  LS+Y IKK    +G  H + +T+DG 
Sbjct: 2970 VSQEGKLYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKVAVHSGGKHALALTQDGK 3029

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 3030 VFSWGEGEDGKLGHGNRVSLDKPRLIEALKSKRIRDIACGSGHSAAIAS--NGELYTWGL 3087

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG        D++  L      +P+ + AL G+ +++VACG+    T+A+   
Sbjct: 3088 GEYGRLGHG--------DTTTHL------KPKLVDALVGQRVIQVACGSRDAQTMALTED 3133

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG       + P  VD      V+     +  G+  S      G+++
Sbjct: 3134 GSVYSWGDGDFGKLGRGGSDGCYSPLPVDRLNGLGVVQ----VECGAQFSLALTKYGEVW 3189

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    +P +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 3190 TWGKGDYFRLGHGNDHHVRRPTLVEGLRGKKVVHVAVGALHCLAVTDAGQVYAWGDNDHG 3249

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
            + G G      +  P  V  LE   V  VACG  HS+  V+ D+  +G +
Sbjct: 3250 QQGNG--STMVNRKPSLVHNLEDAKVNRVACGSSHSIAWVLTDQPTLGNQ 3297



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 110/244 (45%), Gaps = 19/244 (7%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  Y+WG  + G+LGHGD    D P ++  LS   +     G +++  ++  
Sbjct: 512 HYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEVLSDRTVTYIACGSTYSAAISST 571

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
           G  L +G   +G+LG G   +   P+ V  L    VT  ACG+  +  L       + + 
Sbjct: 572 GELLTWGRGSYGRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSW 631

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   YG+LG G                +    P+ +  L  + +VKV CG   + A+ + 
Sbjct: 632 GDGDYGKLGRG--------------GSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAH 677

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VYTWG G + RLGH  ++    P+ V+  +   V      +S G+++         +Y
Sbjct: 678 GEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRD----LSVGNLHILAITEDQLVY 733

Query: 308 MWGK 311
            WG+
Sbjct: 734 GWGR 737



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 101/238 (42%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G +I  V   C   H  A+   G  YTWG+   G+LGHGD   + +PT+V+ 
Sbjct: 4024 PKLIEALLGTEI--VDIACGGHHSAAISSAGWLYTWGKGRYGRLGHGDSDDQLKPTVVTA 4081

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4082 LQGYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4141

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
                CG+ F+V L+     ++   G   Y +LGHGTD+          L           
Sbjct: 4142 VKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVRRPRKVSALQGKKIVSIATG 4199

Query: 213  ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                                          AQ  PR + AL G+ I +VACG+ HT+A
Sbjct: 4200 SLHCVACSDKGEVYTWGDNDEGQLGDGTTHAQQSPRLVHALQGKNITRVACGSAHTLA 4257



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 18/184 (9%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+++   A + +V++A   +  H +A+ +KG VY+WG G  GRLGH +      P+ ++V
Sbjct: 491 PQSVYGFADD-VVQIASHPDGKHYLALTTKGIVYSWGNGDGGRLGHGDSFSCDEPQVIEV 549

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG------DDWMYPKPLMDLSGW 331
                V      I+ GS  S+  +  G+L  WG+           DD   P  +  L+G 
Sbjct: 550 LSDRTV----TYIACGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTALNGH 605

Query: 332 NLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
            +  +   SG+       +S  + SWG   YG+LG G  G   S +PK VD L   +V+ 
Sbjct: 606 TVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRG--GSDGSKLPKIVDKLLDQNVVK 663

Query: 389 VACG 392
           V CG
Sbjct: 664 VFCG 667



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 21/211 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L    + ++A  C S +  A+   G   TWGR   G+LGHG       PT+V+ 
Sbjct: 544 PQVIEVLSDRTVTYIA--CGSTYSAAISSTGELLTWGRGSYGRLGHGICDDISIPTVVTA 601

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
           L+ + +     G+G S T+ VT  G   ++G   +G+LG G       P  V  L+ + V
Sbjct: 602 LNGHTVTHVACGSGDSQTLCVTNSGIVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNV 661

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG  F+  L++     +   G   + +LGHG  NE + +             P+ +
Sbjct: 662 VKVFCGGQFSAALTA--HGEVYTWGKGDHYRLGHG--NEEHVR------------FPKLV 705

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
             L  + +  ++ G  H +A+     VY WG
Sbjct: 706 EGLRNKKVRDLSVGNLHILAITEDQLVYGWG 736



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           +D   V   C      A+   G  YTWG+ +  +LGHG++     P +V  L   K++  
Sbjct: 657 LDQNVVKVFCGGQFSAALTAHGEVYTWGKGDHYRLGHGNEEHVRFPKLVEGLRNKKVRDL 716

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKH 139
             G  H + +TED   L +GW ++
Sbjct: 717 SVGNLHILAITED--QLVYGWGRN 738



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 3/127 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GELL  G   +   GR    +  ++  PT +  L G  +  VA G      + V   G  
Sbjct: 572 GELLTWGRGSY---GRLGHGICDDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIV 628

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           ++WG  + G+LG G       P IV +L    + K   G   +  +T  G    +G   H
Sbjct: 629 FSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHGEVYTWGKGDH 688

Query: 140 GQLGSGS 146
            +LG G+
Sbjct: 689 YRLGHGN 695



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 15/168 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++ D  G +Y WG    G+LG  E     +P   +     + L P   ++ G       
Sbjct: 3887 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPLPCESL---SALRP-IQLAGGEQTLFAV 3942

Query: 301  AGGGQLY-----MWGKLKNNG-DDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
               G++Y       G+L   G D  M P  L  +    ++   ++SG  H   + ++   
Sbjct: 3943 TADGKVYATGYGALGRLGTGGVDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHV 4002

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             SWG    G+LG+G   + +   PK ++ L G  ++ +ACG  HS  I
Sbjct: 4003 YSWGEGDDGKLGHG--NRITYDRPKLIEALLGTEIVDIACGGHHSAAI 4048


>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like, partial [Callithrix jacchus]
          Length = 4774

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SPT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG +   DRP ++ 
Sbjct: 3967 SPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 4026

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4027 SLRGVEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4086

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4087 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4132

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4133 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4192

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4193 ----AIATGSLHCVCCTEDGEVYTWG 4214



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2951 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKV 3008

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3009 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3068

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3069 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3128

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3129 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3174

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3175 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3222



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 106/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2913 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 2970

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2971 GTVPIPRQITALSSYMVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3030

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3031 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3077

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3078 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3134

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            VP+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3135 VPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3190

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3191 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3248

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3249 QKITRVACGSSHSV 3262



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3892 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3951

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3952 GAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4009

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG+ +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4010 KLGHGSRSPCD--------------RPRVIESLRGVEVVDVAAGGAHSACVTAAGDLYTW 4055

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4056 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4113

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4114 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4172

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4173 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4200



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 159/365 (43%), Gaps = 47/365 (12%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S   +   V    + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2884 IRKKAAGLESTATIRTKV----FVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2937

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTATACG 169
              G      VT +G   A G   +G+LG G I +   P P +       +V +V   + G
Sbjct: 2938 AGGSKSLFAVTVEGKVYACGEATNGRLGLG-ISSGTVPIPRQITALSSYMVKKVAVHSGG 2996

Query: 170  ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
               T    +V+G  + + G    G+LGH +    +              +PR I AL  +
Sbjct: 2997 RHATAL--TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTK 3039

Query: 230  TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
             I  +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     
Sbjct: 3040 RIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ---- 3095

Query: 290  ISAGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNM 341
            ++ GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G  
Sbjct: 3096 VACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQ 3155

Query: 342  HHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                   S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + 
Sbjct: 3156 FSLALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVT 3213

Query: 401  DRTNV 405
            D   V
Sbjct: 3214 DSGQV 3218



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 123/277 (44%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 407 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 466

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEP 153
           + P ++S  S  +  K       G +++  +T +G    +G   + +L  G S  NEI  
Sbjct: 467 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILI 526

Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
                   +    +CG  F   L+  E   + + G   YG+LG G  +   T        
Sbjct: 527 MISGLDRQKFIYKSCGIRFAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKT-------- 578

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 579 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 632

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 633 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 665



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3939 AVTADGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3998

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG GS      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3999 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVDVAAGGAHSACVTA--AGDLYTWG 4056

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4057 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4102

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4103 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4158

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4159 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4218

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4219 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4254



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3890 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3948

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3949 TG--------------YGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLAL 3994

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3995 SSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGVEVVD----VAAGGAHSACVTAAG 4050

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4051 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4108

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4109 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4153



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L GV++  VAAG    H   V   G  YTWG+   G+LGH D   + +P +V  
Sbjct: 4022 PRVIESLRGVEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4079

Query: 107  LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 4080 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4139

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4140 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4197

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ + +VACG+ HT+A
Sbjct: 4198 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4255



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3026 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3083

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3084 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLN 3143

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3144 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3201

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3202 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3261

Query: 242  VA 243
            VA
Sbjct: 3262 VA 3263



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/271 (26%), Positives = 113/271 (41%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 411 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 461

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G Y RL H
Sbjct: 462 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYXRLDH 516

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDD 318
                  +   +    R   +     I      +      GQ++ WG     KL   G D
Sbjct: 517 GRSAMNEILIMISGLDRQKFIYKSCGIRFA--QTLAFYENGQVWSWGDGDYGKLGRGGSD 574

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 575 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 630

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 631 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 661



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/148 (33%), Positives = 67/148 (45%), Gaps = 4/148 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4119 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4175

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4176 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4235

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGAS 183
              L   +V   ACG+  T+  S+ +  S
Sbjct: 4236 AALQGKKVNRVACGSAHTLAWSTSKPTS 4263



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3182 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3239

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3240 PTLVQGLEGQKITRVACGSSHSVAWT 3265



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 85/224 (37%), Gaps = 43/224 (19%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI--KKAGAG 118
           V   C S +  A+  EG  YTWGR    +L HG     +   ++S L + K   K  G  
Sbjct: 485 VHIACGSTYSAAITAEGELYTWGRGNYXRLDHGRSAMNEILIMISGLDRQKFIYKSCGIR 544

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
            + T+   E+G   ++G   +G+LG G       P  +  L   +V    CG+ F++ L+
Sbjct: 545 FAQTLAFYENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 604

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYN--------------------------TKDSSV- 210
             +   + + G     +LGHGT+                              T+DS V 
Sbjct: 605 --KDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVH 662

Query: 211 -----------KLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                            +P P A+  L  + IV +ACG   + A
Sbjct: 663 SWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 706



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 587 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 646

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 647 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 706

Query: 175 WLSSVE 180
           W S  E
Sbjct: 707 WSSCSE 712



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G   T  + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2880 SGSLIRKKAAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2936

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2937 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYMVKKVAVH 2993

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 2994 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3051

Query: 397  LVIV 400
              + 
Sbjct: 3052 AALT 3055



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3885 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3941

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3942 A-DGKLYATGYGAGGRLGIGGTESVSSPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4000

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4001 YSWGEAEDGKLGHG--SRSPCDRPRVIESLRGVEVVDVAAGGAHS 4043


>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Pan paniscus]
          Length = 4839

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4092 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4151

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4198 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3016 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3073

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3074 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3133

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3134 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3193

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3194 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3239

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3240 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3287



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2978 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3035

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3036 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3095

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3096 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3142

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3143 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3199

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3200 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3255

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3256 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3313

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3314 QKITRVACGSSHSV 3327



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4120

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4121 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2949 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3002

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 3003 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3062

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3063 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3106

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3107 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3162

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3163 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3222

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3223 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3280

Query: 403  TNV 405
              V
Sbjct: 3281 GQV 3283



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 422 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 481

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 593

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 594 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 647

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 648 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 680



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4121

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4122 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4167

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4223

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4284 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4319



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 426 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 476

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 477 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 531

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 532 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 589

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 590 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 645

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 646 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4015 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4059

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4060 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4115

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4116 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4173

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4174 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4218



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3091 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3148

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3149 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3208

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3209 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3266

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3267 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3326

Query: 242  VA 243
            VA
Sbjct: 3327 VA 3328



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4184 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4301 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4341



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3247 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3304

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3305 PTLVQGLEGQKITRVACGSSHSVAWT 3330



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 388 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 447

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 565

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 566 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 619



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 601 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 647

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 648 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 700

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 701 LPGLDTKHIVGIACGPAQSFA 721



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2945 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 3001

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 3002 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3058

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3059 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3116

Query: 397  LVIV 400
              + 
Sbjct: 3117 AALT 3120



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4007 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4112


>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
            catus]
          Length = 4837

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVV 4149

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCTEDGEVYTWG 4277



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q ++V+  +    +G   + C      ++ W    
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHHVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276

Query: 403  TNV 405
              V
Sbjct: 3277 GQV 3279



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4119

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4120 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTD 4165

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4221

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4282 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPVLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 34/285 (11%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4011

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4012 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4057

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4058 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4113

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWG 355
             LY WGK +      ++ +D + PK +  L G ++  +   SG+       D   + SWG
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWG 4173

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4174 DGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 49/244 (20%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV-------KL 212
             + V    CGA F++ L+  +   +   G   Y +LGHG+D   + +   V       K+
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSD--VHVRKPQVVEGLRGKKI 3260

Query: 213  AYEA---------------------------------QPRPRAIAALAGETIVKVACGTN 239
             + A                                   +P  +  L G+ I +VACG++
Sbjct: 3261 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3320

Query: 240  HTVA 243
            H+VA
Sbjct: 3321 HSVA 3324



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4339



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 397  LVIV 400
              + 
Sbjct: 3113 AALT 3116



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4004

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4005 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4064 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4110


>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Nomascus leucogenys]
          Length = 4530

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3723 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3782

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3783 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3842

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3843 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3888

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3889 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3948

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 3949 ----AIATGSLHCVCCTEDGEVYTWG 3970



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2707 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2764

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2765 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2824

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2825 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2884

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2885 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2930

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2931 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 2978



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2669 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 2726

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2727 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 2786

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 2787 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 2833

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2834 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2890

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2891 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2946

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 2947 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3004

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3005 QKITRVACGSSHSV 3018



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3648 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3707

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3708 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3765

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3766 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3811

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 3812 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3869

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3870 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3928

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3929 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 3956



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2640 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2693

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2694 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2753

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 2754 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2797

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 2798 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2853

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 2854 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2913

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 2914 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 2971

Query: 403  TNV 405
              V
Sbjct: 2972 GQV 2974



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3695 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3754

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3755 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 3812

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 3813 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3858

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 3859 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 3914

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3915 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3974

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 3975 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4010



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3646 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3705

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3706 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3750

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3751 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3806

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3807 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 3864

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 3865 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3909



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2782 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 2839

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2840 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2899

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 2900 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2957

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 2958 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3017

Query: 242  VA 243
            VA
Sbjct: 3018 VA 3019



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3875 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3931

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3932 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3991

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 3992 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4032



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 49/192 (25%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ +  LA   IVK+A  ++  H +A+ + G VY+WG G  GRLGH +      P+ +  
Sbjct: 439 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISA 498

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
           F           I+ GS  S+     G+LY WG+                          
Sbjct: 499 FSGKQAGKHVVHIACGSTYSAAITAEGELYTWGR-------------------------- 532

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            GN                  YG LG+G    +  A+P  V  L+G+ VI VACG G + 
Sbjct: 533 -GN------------------YGRLGHG--SSEDEAIPMLVAGLKGLKVIDVACGSGDAQ 571

Query: 398 VIVDRTNVGERL 409
            +    N   RL
Sbjct: 572 TLAVTENETTRL 583



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 19/132 (14%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 435 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 485

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 486 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 540

Query: 264 REQKDEWVPRRV 275
              +DE +P  V
Sbjct: 541 GSSEDEAIPMLV 552



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 5/137 (3%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 431 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 490

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 491 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 550

Query: 155 PVRCLVS-EVTATACGA 170
            V  L   +V   ACG+
Sbjct: 551 LVAGLKGLKVIDVACGS 567



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2938 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2995

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 2996 PTLVQGLEGQKITRVACGSSHSVAWT 3021



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2636 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2692

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2693 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2749

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 2750 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2807

Query: 397  LVIV 400
              + 
Sbjct: 2808 AALT 2811



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3641 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3697

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3698 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3756

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 3757 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 3803


>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
          Length = 4834

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Ailuropoda melanoleuca]
          Length = 4837

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCTEDGEVYTWG 4277



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3058

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276

Query: 403  TNV 405
              V
Sbjct: 3277 GQV 3279



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4119

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4120 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4221

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4282 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4011

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4012 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4057

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4058 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4113

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4171

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4172 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                 V 
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4339



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 397  LVIV 400
              + 
Sbjct: 3113 AALT 3116



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4004

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4005 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4064 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4110


>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
 gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4834

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
            familiaris]
          Length = 4837

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4030 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4089

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4090 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4149

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4150 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4195

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4196 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4255

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4256 ----AIATGSLHCVCCTEDGEVYTWG 4277



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3283



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4014

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4015 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4072

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4073 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4118

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4119 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4176

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4177 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4235

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4236 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4263



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2998

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGR 3058

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3059 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3158

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3218

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3219 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3276

Query: 403  TNV 405
              V
Sbjct: 3277 GQV 3279



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4002 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4061

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4062 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4119

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4120 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4165

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4166 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4221

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4281

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4282 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4317



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3953 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4012

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4013 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4057

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4058 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4113

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4171

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4172 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4216



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                 V 
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4182 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4238

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4239 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4298

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4299 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4339



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 397  LVIV 400
              + 
Sbjct: 3113 AALT 3116



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4004

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4005 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4063

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4064 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4110


>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pan troglodytes]
          Length = 4776

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3969 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4028

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4029 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4088

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4089 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4134

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4135 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4194

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4195 ----AIATGSLHCVCCTEDGEVYTWG 4216



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3004 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3061

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3062 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3121

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3122 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3181

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3182 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3227

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3228 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3275



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2966 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3023

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3024 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3083

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3084 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3130

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3131 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3187

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3188 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3243

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3244 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3301

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3302 QKITRVACGSSHSV 3315



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2937 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2990

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2991 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3050

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3051 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3094

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3095 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3150

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3151 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3210

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3211 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3268

Query: 403  TNV 405
              V
Sbjct: 3269 GQV 3271



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 95/199 (47%), Gaps = 21/199 (10%)

Query: 215  EAQPRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            E+   P  + ++    I KVA   G  H +A+ S+G VY+WG    G+LGH  +     P
Sbjct: 3965 ESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRP 4024

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
            R ++  +   V+     ++AG  +S+C    G LY WGK +      ++ +D + PK + 
Sbjct: 4025 RVIESLRGIEVVD----VAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVE 4080

Query: 327  DLSGWNLRCMD----SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
             L G   R +D    SG+       D   + SWG   YG+LG G  G     +P K+D L
Sbjct: 4081 ALQGH--RVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRG--GSDGCKVPMKIDSL 4136

Query: 382  EGMHVISVACGYGHSLVIV 400
             G+ V+ V CG   S+ + 
Sbjct: 4137 TGLGVVKVECGSQFSVALT 4155



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3079 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3136

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3137 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3196

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3197 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3254

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3255 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3314

Query: 242  VA 243
            VA
Sbjct: 3315 VA 3316



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4121 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4177

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4178 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4237

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4238 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4278



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3235 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3292

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3293 PTLVQGLEGQKITRVACGSSHSVAWT 3318



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2933 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2989

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2990 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3046

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3047 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3104

Query: 397  LVIV 400
              + 
Sbjct: 3105 AALT 3108


>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
            catus]
          Length = 4844

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4037 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4096

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4097 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVV 4156

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4157 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4202

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4203 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4262

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4263 ----AIATGSLHCVCCTEDGEVYTWG 4284



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3019 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3076

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3077 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3136

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3137 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3196

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3197 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3242

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3243 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3290



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2981 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3038

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3039 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3098

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3099 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3145

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3146 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3202

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3203 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3258

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3259 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3316

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3317 QKITRVACGSSHSV 3330



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3962 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4021

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4022 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4079

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4080 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4125

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q ++V+  +    +G   + C      ++ W    
Sbjct: 4126 GKGRYGRLGHSDSEDQLKPKLVEALQGHHVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4183

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4184 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4242

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4243 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4270



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2952 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3005

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 3006 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3065

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3066 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3109

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3110 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3165

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3166 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3225

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3226 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3283

Query: 403  TNV 405
              V
Sbjct: 3284 GQV 3286



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPV 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4009 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4068

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4069 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4126

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4127 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTD 4172

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4173 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4228

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4229 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4288

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4289 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4324



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPVLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 34/285 (11%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3960 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4018

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4019 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4064

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4065 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4120

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWG 355
             LY WGK +      ++ +D + PK +  L G ++  +   SG+       D   + SWG
Sbjct: 4121 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHHVVDVACGSGDAQTLCLTDDDTVWSWG 4180

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4181 DGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4223



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 49/244 (20%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3094 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3151

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3152 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3211

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV-------KL 212
             + V    CGA F++ L+  +   +   G   Y +LGHG+D   + +   V       K+
Sbjct: 3212 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSD--VHVRKPQVVEGLRGKKI 3267

Query: 213  AYEA---------------------------------QPRPRAIAALAGETIVKVACGTN 239
             + A                                   +P  +  L G+ I +VACG++
Sbjct: 3268 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 3327

Query: 240  HTVA 243
            H+VA
Sbjct: 3328 HSVA 3331



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4189 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4245

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4246 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4305

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4306 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4346



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3250 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3307

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3308 PTLVQGLEGQKITRVACGSSHSVAWT 3333



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPVLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2948 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 3004

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 3005 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3061

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3062 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3119

Query: 397  LVIV 400
              + 
Sbjct: 3120 AALT 3123



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3955 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4011

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4012 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4070

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4071 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4117


>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
 gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
          Length = 4834

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4008

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4009 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
 gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
            norvegicus]
          Length = 4779

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3972 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4031

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4032 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4091

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4092 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4137

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4138 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4197

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4198 ----AIATGSLHCVCCTEDGEVYTWG 4219



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2955 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3012

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3013 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3072

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3073 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3132

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3133 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3178

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3179 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3226



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2917 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 2974

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2975 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3034

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3035 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3081

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3082 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3138

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3139 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3194

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3195 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3252

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3253 QKITRVACGSSHSV 3266



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3897 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3956

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3957 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4014

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4015 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4060

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4061 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4118

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4119 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4177

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4178 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4205



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 422 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 481

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 541

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 542 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 593

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 594 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 647

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 648 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 680



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2901 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 2959 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3016

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3017 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3062

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3063 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3118

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3119 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3178

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3179 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3222



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3944 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4003

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4004 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4061

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4062 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4107

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4108 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4163

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4223

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4224 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4259



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 471 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 516

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 517 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 574

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 575 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 632

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 633 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 676



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3895 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3953

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3954 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3999

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4000 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4055

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4056 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4113

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4114 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4158



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3030 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3087

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3088 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3147

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3148 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3205

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3206 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3265

Query: 242  VA 243
            VA
Sbjct: 3266 VA 3267



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4124 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4180

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4181 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4240

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4241 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4281



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3186 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3243

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3244 PTLVQGLEGQKITRVACGSSHSVAWT 3269



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 388 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 447

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 448 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 507

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 508 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 565

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 566 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 619



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 481 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 540

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 541 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 600

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 601 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 647

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 648 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 700

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 701 LPGLDTKHIVGIACGPAQSFA 721



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)

Query: 228  GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            G  I K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+   
Sbjct: 2885 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2940

Query: 288  AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + S
Sbjct: 2941 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 2998

Query: 339  GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS 
Sbjct: 2999 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3056

Query: 398  VIV 400
             + 
Sbjct: 3057 ALT 3059



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3890 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3946

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3947 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4005

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4006 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4048


>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
            musculus]
          Length = 4841

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4034 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4093

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4094 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4153

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4154 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4199

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4200 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4259

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4260 ----AIATGSLHCVCCTEDGEVYTWG 4281



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3017 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3074

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3075 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3134

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3135 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3194

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3195 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3240

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3241 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3288



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2979 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3036

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3037 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3096

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3097 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3143

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3144 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3200

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3201 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3256

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3257 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3314

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3315 QKITRVACGSSHSV 3328



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3959 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4018

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4019 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4076

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4077 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4122

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4123 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4180

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4181 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4239

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4240 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4267



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 482 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 541

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 542 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 601

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 602 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 653

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 654 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 707

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 708 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 740



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2963 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3020

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3021 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3078

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3079 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3124

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3125 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3180

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3181 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3240

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3241 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3284



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4006 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4065

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4066 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4123

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4124 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4169

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4170 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4225

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4226 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4285

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4286 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4321



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 531 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 576

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 577 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 634

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 635 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 692

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 693 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 736



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3957 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4016

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4017 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4061

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4062 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4117

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4118 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4175

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4176 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4220



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3092 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3149

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3150 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3209

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3210 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3267

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3268 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3327

Query: 242  VA 243
            VA
Sbjct: 3328 VA 3329



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4186 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4242

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4243 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4302

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4303 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4343



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3248 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3305

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3306 PTLVQGLEGQKITRVACGSSHSVAWT 3331



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 448 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 507

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 508 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 567

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 568 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 625

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 626 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 679



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 541 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 600

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 601 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 660

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 661 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 707

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 708 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 760

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 761 LPGLDSKHIVGIACGPAQSFA 781



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)

Query: 228  GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            G  I K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+   
Sbjct: 2947 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 3002

Query: 288  AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + S
Sbjct: 3003 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3060

Query: 339  GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS 
Sbjct: 3061 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3118

Query: 398  VIV 400
             + 
Sbjct: 3119 ALT 3121



 Score = 38.5 bits (88), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3952 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4008

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4009 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4067

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4068 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4110


>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
            musculus]
          Length = 4902

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4095 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4154

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4155 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4214

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4215 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4260

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4261 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4320

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4321 ----AIATGSLHCVCCTEDGEVYTWG 4342



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3078 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3135

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3136 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3195

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3196 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3255

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3256 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3301

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3302 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3349



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 3040 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3097

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3098 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3157

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3158 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3204

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3205 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3261

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3262 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3317

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3318 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3375

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3376 QKITRVACGSSHSV 3389



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 4020 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4079

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4080 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4137

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4138 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4183

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4241

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4242 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4300

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4301 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4328



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 545 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 604

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 605 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 664

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 665 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 716

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 717 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 770

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 771 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 803



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 3024 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3081

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3082 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3139

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3140 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3185

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3186 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3241

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3242 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3301

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3302 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3345



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4067 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4126

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4127 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4184

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4185 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4230

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4231 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4286

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4287 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4346

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4347 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4382



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 594 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 639

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 640 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 697

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 698 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 755

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 756 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 799



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 4018 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4076

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4077 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4122

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4123 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4178

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4179 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4236

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4237 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4281



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3153 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3210

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3211 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3270

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3271 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3328

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3329 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3388

Query: 242  VA 243
            VA
Sbjct: 3389 VA 3390



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4247 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4303

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4304 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4363

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4364 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 4404



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3309 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3366

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3367 PTLVQGLEGQKITRVACGSSHSVAWT 3392



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 511 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 570

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 571 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 630

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 631 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 688

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 689 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 742



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 604 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 663

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 664 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 723

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 724 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 770

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 771 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 823

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 824 LPGLDSKHIVGIACGPAQSFA 844



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)

Query: 228  GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            G  I K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+   
Sbjct: 3008 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 3063

Query: 288  AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + S
Sbjct: 3064 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3121

Query: 339  GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS 
Sbjct: 3122 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3179

Query: 398  VIV 400
             + 
Sbjct: 3180 ALT 3182



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 4013 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4069

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4070 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4128

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4129 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4171


>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
 gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
            domain and RCC1-like domain-containing protein 2
          Length = 4836

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4118

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4010

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4011 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4112

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4170

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4171 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 4338



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDSKHIVGIACGPAQSFA 776



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)

Query: 228  GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            G  I K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+   
Sbjct: 2942 GSLIRKKTPGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2997

Query: 288  AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + S
Sbjct: 2998 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3055

Query: 339  GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS 
Sbjct: 3056 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 398  VIV 400
             + 
Sbjct: 3114 ALT 3116



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4004 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105


>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Pongo abelii]
          Length = 4581

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3774 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3833

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3834 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3893

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3894 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3939

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3940 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3999

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4000 ----AIATGSLHCVCCTEDGEVYTWG 4021



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3699 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3758

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3759 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3816

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3817 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3862

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 3863 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3920

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3921 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3979

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3980 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4007



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3746 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3805

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3806 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 3863

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 3864 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3909

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 3910 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 3965

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3966 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4025

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4026 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4061



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 145/356 (40%), Gaps = 53/356 (14%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            A  +  + ++WG N++ QLG     +   P+    LS   + +   G      VT +G  
Sbjct: 2705 AATIRTKVFSWGLNDKDQLGGLKNKKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 2764

Query: 132  LAFG----WNKHGQLGSGSIRNEIEPSPVRCLVSEVT---ATACGADFTVWLSSVEGASI 184
             A G    W   G LG  S    I    +  L S V    A   G   T +   V+G  +
Sbjct: 2765 YACGEATKWPAWG-LGISSGTVPIPHGXITALSSYVVKKVAVHSGTSQTGF-XPVDG-KV 2821

Query: 185  LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
             + G    G+LGH +                    PR I AL  + I  +ACG++H+ A+
Sbjct: 2822 FSWGEGDDGKLGHFSR------------------MPRLIEALKTKRIRDIACGSSHSAAL 2863

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--G 302
             S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A   
Sbjct: 2864 TSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTD 2919

Query: 303  GGQLYMWGKLKNNGDDWM-----------YPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
             G ++  G    +GD W             P+ +  L+G  +  ++ G         S  
Sbjct: 2920 EGLVFSLG----DGDLWKIGPGPEVKGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGV 2975

Query: 352  I-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC-GYGHSLVIVDRTNV 405
            + +WG   Y  LG+G         P+ V+ L G  +++ +C G  H L + D   V
Sbjct: 2976 VWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVACSCSGALHCLAVTDSGQV 3029



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3697 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 3756

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3757 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3801

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3802 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3857

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3858 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 3915

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 3916 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3960



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 155/368 (42%), Gaps = 45/368 (12%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ---LGHGDKIQRDRPTI 103
            P+    L  +++  VA G  S    AV VEG+ Y  G   +     LG            
Sbjct: 2734 PSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGX 2791

Query: 104  VSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
            ++ LS Y +KK    +G S T     DG   ++G    G+LG  S      P  +  L +
Sbjct: 2792 ITALSSYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSRM----PRLIEALKT 2847

Query: 162  E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
            + +   ACG+  +  L+S     +   GL +YG+LGHG +                Q +P
Sbjct: 2848 KRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT--------------TQLKP 2891

Query: 221  RAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
            + +  L G  +++VACG+    T+A+  +G V++ G G   ++G   E K   +P+ ++ 
Sbjct: 2892 KMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVKGCNIPQNIER 2951

Query: 278  FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGW 331
                 V      I  G+  S      G ++ WGK       +G D    KP  +  L G 
Sbjct: 2952 LNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGK 3007

Query: 332  NL-RCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  C  SG +H     DS  + +WG   +G+ G G      +  P  V  LEG  +  V
Sbjct: 3008 KIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEGQKITRV 3065

Query: 390  ACGYGHSL 397
            ACG  HS+
Sbjct: 3066 ACGSSHSV 3073



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3926 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3982

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3983 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4042

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4043 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 4083



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 2/121 (1%)

Query: 65   CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG-AGRSHTV 123
            C +   +A+   G  +TWG+ +  +LGHG  +   +P +V  L   KI     +G  H +
Sbjct: 2962 CGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVACSCSGALHCL 3021

Query: 124  VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGA 182
             VT+ G   A+G N HGQ G+G+     +P+ V+ L   ++T  ACG+  +V  ++V+ A
Sbjct: 3022 AVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDVA 3081

Query: 183  S 183
            +
Sbjct: 3082 T 3082



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 59   RFVAAGCV-SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
            + VA  C  + HC+AV   G+ Y WG N+ GQ G+G      +PT+V  L   KI +   
Sbjct: 3008 KIVACSCSGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVAC 3067

Query: 118  GRSHTVVVT 126
            G SH+V  T
Sbjct: 3068 GSSHSVAWT 3076



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 38.9 bits (89), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3692 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3748

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3749 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3807

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 3808 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 3854


>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Loxodonta africana]
          Length = 4838

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP +V 
Sbjct: 4031 TPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 4090

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4091 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4150

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4151 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4196

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4197 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4256

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4257 ----AIATGSLHCVCCTEDGEVYTWG 4278



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3013 GKVYACGEATNGRLGL--GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3070

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3071 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3130

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3131 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3190

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3191 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3236

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3237 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 3284



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2975 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3032

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3033 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3092

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3093 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3139

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3140 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3196

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3197 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3252

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3253 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3310

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3311 QKITRVACGSSHSV 3324



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3956 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 4015

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    V+ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4016 GAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4073

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR + +L G  +V VA G  H+  V + G +YTW
Sbjct: 4074 KLGHGNRSPCD--------------RPRVVESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4119

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4120 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4177

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4178 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4236

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4237 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4264



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E+ P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPV 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            +R  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2946 MRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2999

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 3000 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGR 3059

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3060 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3103

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3104 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3159

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3160 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3219

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3220 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 3277

Query: 403  TNV 405
              V
Sbjct: 3278 GQV 3280



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4003 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEG 4062

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  V  L   EV   A G   +  +++     +   G
Sbjct: 4063 EVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4120

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4121 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4166

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4167 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4222

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4223 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4282

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4283 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4318



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEVIPVLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3954 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYAT 4013

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4014 G---------------YGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLAL 4058

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR V+  +   V+     ++AG  +S+C    G
Sbjct: 4059 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEVVD----VAAGGAHSACVTAAG 4114

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4115 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4172

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4173 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4217



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/238 (27%), Positives = 103/238 (43%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+++  VAAG    H   V   G  YTWG+   G+LGH D   + +P +V  
Sbjct: 4086 PRVVESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEA 4143

Query: 107  LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 4144 LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 4203

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4204 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4261

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ + +VACG+ HT+A
Sbjct: 4262 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 4319



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3088 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3145

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3146 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3205

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                 V 
Sbjct: 3206 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3263

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 3264 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3323

Query: 242  VA 243
            VA
Sbjct: 3324 VA 3325



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 55/169 (32%), Positives = 73/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4183 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4239

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4240 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4299

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ +  S         G+L      EYN
Sbjct: 4300 AALQGKKVNRVACGSAHTLAWSTSKPTST--------GKLPAQVPMEYN 4340



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3244 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3301

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3302 PTLVQGLEGQKITRVACGSSHSVAWT 3327



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 104/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       + V P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEVIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 VLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLASLGVTQIACAEKRFLILSRSGRVYTQAYNSDALAPQLVQGLASRNIIKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D + P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEVIPVLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  + K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2942 SGSLMRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2998

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2999 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3055

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3056 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3113

Query: 397  LVIV 400
              I 
Sbjct: 3114 AAIT 3117



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3949 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 4005

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4006 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESVQHVFIKKVAVNSGGKHCLALSSEGEV 4064

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ V+ L G+ V+ VA G  HS
Sbjct: 4065 YSWGEAEDGKLGHG--NRSPCDRPRVVESLRGIEVVDVAAGGAHS 4107


>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
            mulatta]
          Length = 4840

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4058 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4117

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4118 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4177

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4178 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4223

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4224 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4283

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4284 ----AIATGSLHCVCCTEDGEVYTWG 4305



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3983 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4042

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4043 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4100

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4101 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4146

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4147 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4204

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4205 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4263

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4264 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4291



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4030 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4089

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4090 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4147

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4148 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4193

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4194 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4249

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4250 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4309

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4310 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4345



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3981 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4040

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4041 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4085

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4086 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4141

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4142 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4199

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4200 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4244



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4210 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4266

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4267 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4326

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4327 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 4367



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3976 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4032

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4033 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4091

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 4092 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 4138


>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4829

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4022 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4081

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4082 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4141

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4142 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4187

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4188 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4247

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4248 ----AIATGSLHCVCCTEDGEVYTWG 4269



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3006 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3063

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3064 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3123

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3124 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3183

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3184 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3229

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3230 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3277



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2968 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3025

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3026 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3085

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3086 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3132

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3133 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3189

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3190 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3245

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3246 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3303

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3304 QKITRVACGSSHSV 3317



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3947 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4006

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4007 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4064

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4065 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4110

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4111 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4168

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4169 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4227

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4228 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4255



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2939 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2992

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2993 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3052

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3053 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3096

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3097 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3152

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3153 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3212

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3213 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3270

Query: 403  TNV 405
              V
Sbjct: 3271 GQV 3273



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3994 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4053

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4054 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4111

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4112 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4157

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4158 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4213

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4214 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4273

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4274 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4309



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3945 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4004

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4005 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4049

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4050 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4105

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4106 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4163

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4164 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4208



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3081 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3138

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3139 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3198

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3199 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3256

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3257 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3316

Query: 242  VA 243
            VA
Sbjct: 3317 VA 3318



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4174 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4230

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4231 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4290

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4291 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4331



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3237 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3294

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3295 PTLVQGLEGQKITRVACGSSHSVAWT 3320



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2935 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2991

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2992 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3048

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3049 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3106

Query: 397  LVIV 400
              + 
Sbjct: 3107 AALT 3110



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3940 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3996

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3997 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4055

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4056 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4098


>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
          Length = 4834

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4027 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4086

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4087 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4146

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4147 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4192

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4193 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4252

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4253 ----AIATGSLHCVCCTEDGEVYTWG 4274



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3011 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3068

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3069 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3128

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3129 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3188

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3189 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3234

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3282



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2973 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3030

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3031 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3090

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3091 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3137

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3138 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3194

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3195 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3250

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3251 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3308

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3309 QKITRVACGSSHSV 3322



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3952 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4011

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4012 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4069

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4070 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4115

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4116 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4173

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4174 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4232

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4233 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4260



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2944 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2997

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 3057

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3058 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3101

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3102 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3157

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3217

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3218 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 3275

Query: 403  TNV 405
              V
Sbjct: 3276 GQV 3278



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3999 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4058

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4059 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4116

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 4117 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 4162

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4163 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4218

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4278

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4279 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4314



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 480 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 531 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 700 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3950 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4009

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4010 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4054

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4055 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4110

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4111 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4168

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4169 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4213



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3086 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3143

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3144 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3203

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3204 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3261

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3262 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3321

Query: 242  VA 243
            VA
Sbjct: 3322 VA 3323



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4179 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4235

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4236 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4295

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4296 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4336



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3242 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3299

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3300 PTLVQGLEGQKITRVACGSSHSVAWT 3325



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 701

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 702 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2940 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2996

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2997 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 3053

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3054 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3111

Query: 397  LVIV 400
              + 
Sbjct: 3112 AALT 3115



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3945 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4001

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4002 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4060

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4061 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4103


>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
            [Equus caballus]
          Length = 4840

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4033 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4092

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4093 SLRGIELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 4152

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4153 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4198

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4199 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4258

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4259 ----AIATGSLHCVCCTEDGEVYTWG 4280



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 164/386 (42%), Gaps = 32/386 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3015 GKVYACGEATNGRLGL--GISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 3072

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3132

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3193 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG      + 
Sbjct: 3239 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWGDNDHGQQG 3294

Query: 315  NGDDWMYPKPLM--DLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQK 370
            NG   +  KP +   L G  +  +  G+ H   +   D +  S       +    P G  
Sbjct: 3295 NGTTTVNRKPTLVQGLEGQKITRVACGSSHSVAWTTVDMATPSVHEPVLFQTARDPLGAS 3354

Query: 371  SSAMPKKVDILEGMHVISVACGYGHS 396
               +P   D     + IS   G  HS
Sbjct: 3355 YLGVPSDADSSAASNKIS---GVNHS 3377



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 170/385 (44%), Gaps = 43/385 (11%)

Query: 26   GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
            GS C D VG  +      +  P+    L  +++  VA G  S    AV VEG+ Y  G  
Sbjct: 2972 GSLCCDGVGLSQ------IKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEA 3023

Query: 86   ERGQLGHG-DKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQL 142
              G+LG G        P  V+ LS Y +KK    +G  H   +T DG   ++G    G+L
Sbjct: 3024 TNGRLGLGISSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKL 3083

Query: 143  GSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
            G  S  N  +P  +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG + 
Sbjct: 3084 GHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT 3141

Query: 202  EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYG 259
                           Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G
Sbjct: 3142 --------------TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFG 3187

Query: 260  RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNN 315
            +LG    +   +P+ ++      V      I  G+  S      G ++ WGK       +
Sbjct: 3188 KLGRGGSEGCNIPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGH 3243

Query: 316  GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS 372
            G D    KP  +  L G  +  +  G +H     D+  + +WG   +G+ G G      +
Sbjct: 3244 GSDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVN 3301

Query: 373  AMPKKVDILEGMHVISVACGYGHSL 397
              P  V  LEG  +  VACG  HS+
Sbjct: 3302 RKPTLVQGLEGQKITRVACGSSHSV 3326



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3958 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4017

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4018 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4075

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4076 KLGHGNRSPCD--------------RPRVIESLRGIELVDVAAGGAHSACVTAAGDLYTW 4121

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4122 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 4179

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4180 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4238

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4239 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4266



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4005 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4064

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   E+   A G   +  +++     +   G
Sbjct: 4065 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVDVAAGGAHSACVTA--AGDLYTWG 4122

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 4123 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTD 4168

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4169 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4224

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4225 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4284

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4285 GQLGDG--TTNAIQRPRLVPALQGKKVNRVACGSAHTL 4320



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE VP  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAVPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3956 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4015

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4016 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4060

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   ++     ++AG  +S+C    G
Sbjct: 4061 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIELVD----VAAGGAHSACVTAAG 4116

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4117 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 4174

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4175 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4219



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4185 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4241

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4242 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4301

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4302 PALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPTQVPMEYN 4342



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAVPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 674



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAVP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776


>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
          Length = 4725

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3918 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3977

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3978 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV 4037

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4038 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4083

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4084 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4143

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4144 ----AIATGSLHCVCCTEDGEVYTWG 4165



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 147/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3843 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADGKLYATGY 3902

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3903 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3960

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3961 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4006

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+V Q + V+  +    +G   + C      ++ W    
Sbjct: 4007 GKGRYGRLGHSDSEDQLKPKLVEVLQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 4064

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4065 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4123

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4124 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4151



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPL 536

Query: 99  DRPTIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +    +     G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 17/235 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GLSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TW
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTW 3230



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 140/349 (40%), Gaps = 77/349 (22%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2945 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQV 2998

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVHSGGR 3058

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L+ V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3059 HATALT-VDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3102

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V        
Sbjct: 3103 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV-------- 3154

Query: 292  AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
               +  +C +   Q                           L   D G +          
Sbjct: 3155 ---IQVACGSRDAQ--------------------------TLALTDEGLV---------- 3175

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG   +G+LG G  G +   +P+ ++ L G  V  + CG   SL + 
Sbjct: 3176 FSWGDGDFGKLGRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLALT 3222



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 112/232 (48%), Gaps = 25/232 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLG 262
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLG 3187



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3890 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3949

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3950 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4007

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ +  L G  +V +ACG+    T+ +  
Sbjct: 4008 KGRYGRLGHS--------DS------EDQLKPKLVEVLQGHRVVDIACGSGDAQTLCLTD 4053

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4054 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4109

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4110 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4169

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4170 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4205



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 19/199 (9%)

Query: 220 PRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P+ I+A +G+     +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +DE +P  V
Sbjct: 539 PKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLV 598

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPK---PLM 326
              +   V+  +    +G   +      GQ++ W     GKL   G D    PK    L 
Sbjct: 599 AGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQ 656

Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           DL    +RC    ++   +  D    SWG      LG+G   ++    PK ++ L+G  V
Sbjct: 657 DLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLLEGLQGKKV 712

Query: 387 ISVACGYGHSLVIVDRTNV 405
           I VA G  H L + + + V
Sbjct: 713 IDVAAGSTHCLALTEDSEV 731



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3841 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVTADG-KLYA 3899

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3900 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3945

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3946 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4001

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4002 DLYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGH--RVVDIACGSGDAQTLCLTDDDTVWS 4059

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4060 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4104



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4070 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4126

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4127 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4186

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4187 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4227



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 443 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 42.0 bits (97), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 75/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2941 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2997

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2998 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 3055 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 3112

Query: 397  LVIV 400
              + 
Sbjct: 3113 AALT 3116



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3836 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPIQLIGGEQTLFAVT 3892

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3893 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3951

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 3952 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3994


>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
          Length = 4822

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 126/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4015 TPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4074

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4075 SLRGVEVVDIAAGGAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHRVI 4134

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +   + + G   YG+LG G  +                  P  I 
Sbjct: 4135 DVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKI--------------PMKID 4180

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  + KV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4181 SLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4240

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4241 ----AIATGSLHCVCCTEDGEVYTWG 4262



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 2997 GKIYACGEATNGRLGL--GLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3054

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G   ++G  ++
Sbjct: 3055 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYSWGLGEY 3114

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    ++ P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3115 GRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3174

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3175 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3220

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3221 FRLGHGTDVHVRKPQMVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3268



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 170/374 (45%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2959 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKIYACGEATNGRLGLGLSS 3016

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3017 GTIPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3076

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     + + GL +YG+LGHG DN           
Sbjct: 3077 RLIEALKTKRIRDIACGSSHSAAITS--SGELYSWGLGEYGRLGHG-DNA---------- 3123

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q RP+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3124 ---TQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3180

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM 326
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP M
Sbjct: 3181 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQM 3236

Query: 327  --DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
               L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3237 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3294

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3295 QKITRVACGSSHSV 3308



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3940 GTIYGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3999

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +     A   G    + LSS EG  + + G  + G
Sbjct: 4000 GAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4057

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 4058 KLGHGNRSPCD--------------RPRVIESLRGVEVVDIAAGGAHSACITASGELFTW 4103

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ VD  Q + V+  +    +G   + C      ++ W    
Sbjct: 4104 GKGRYGRLGHGDSEDQLKPKLVDALQGHRVI--DVACGSGDAQTLCLTDDDMVWSWGDGD 4161

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4162 YGKLGRGGSDGCKIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4220

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4221 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4248



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 123/271 (45%), Gaps = 23/271 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L    I  +AA     H +A+   G  ++WG  + G+LGHGD    + PT++
Sbjct: 468 LAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMI 527

Query: 105 SELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           +  +  +  K       G +++ V+T DG    +G   +G+LG GS  ++  P  V  L 
Sbjct: 528 AAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGSSEDQTTPMLVTALK 587

Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   ACG+     L+  E   + + G   YG+LG G  +   T              
Sbjct: 588 GLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------------- 633

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +  L    IVKV CG+  +VA+   G VYTWG G   RLGH   +    P+ +D  Q
Sbjct: 634 PKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTLQ 693

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
              V+     ++ GS +       G+++ WG
Sbjct: 694 GKKVVD----VAVGSTHCLALTDDGEVHSWG 720



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 153/346 (44%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2943 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY 3000

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            A G   +G+LG    SG+I    + + +   V +  A   G    + L +V+G  + + G
Sbjct: 3001 ACGEATNGRLGLGLSSGTIPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 3058

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3059 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAITSSG 3104

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +Y+WG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3105 ELYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3160

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3161 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3220

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3221 FRLGHG--TDVHVRKPQMVEGLRGKKIVHVAVGALHCLAVTDTGQV 3264



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 154/355 (43%), Gaps = 36/355 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    I+K    +G  H + ++ +G
Sbjct: 3987 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEG 4046

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4047 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGVEVVDIAAGGAHSACITA--SGELFTWG 4104

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ VACG+    T+ +  
Sbjct: 4105 KGRYGRLGHG--------DS------EDQLKPKLVDALQGHRVIDVACGSGDAQTLCLTD 4150

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        +P ++D      V      +  GS  S      G +
Sbjct: 4151 DDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGV----TKVECGSQFSVALTKSGAV 4206

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4207 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4266

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV--IVDRTNVGERLDQV 412
            G+LG G     +   P+ V  L+G  +  VACG  H+L       TN G+   QV
Sbjct: 4267 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQV 4319



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 105/238 (44%), Gaps = 45/238 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L GV++  +AAG    H   +   G  +TWG+   G+LGHGD   + +P +V  
Sbjct: 4070 PRVIESLRGVEVVDIAAG--GAHSACITASGELFTWGKGRYGRLGHGDSEDQLKPKLVDA 4127

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 4128 LQGHRVIDVACGSGDAQTLCLTDDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTGLGV 4187

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
            T   CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 4188 TKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4245

Query: 205  -------TKDSSVKL------------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D  V                 A  RPR +AAL G+ I +VACG+ HT+A
Sbjct: 4246 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKINRVACGSAHTLA 4303



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 111/263 (42%), Gaps = 30/263 (11%)

Query: 151 IEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
           + P  +  L S ++   A   D   +L+      + + G    G+LGHG D  Y  +   
Sbjct: 468 LAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHG-DATYLEE--- 523

Query: 210 VKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                     P  IAA     AG+ +V +ACG+ ++  +   G +YTWG G YGRLGH  
Sbjct: 524 ----------PTMIAAFNGKQAGKHVVHIACGSTYSAVITIDGELYTWGRGNYGRLGHGS 573

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-W 319
            +D+  P  V   +   V+  +    +G   +      GQ++ W     GKL   G D  
Sbjct: 574 SEDQTTPMLVTALKGLKVV--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGC 631

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
             PK +  L   ++  +  G+     +  D    +WG      LG+G    +    PK +
Sbjct: 632 KTPKLVEKLQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHG--TDEHVRFPKLL 689

Query: 379 DILEGMHVISVACGYGHSLVIVD 401
           D L+G  V+ VA G  H L + D
Sbjct: 690 DTLQGKKVVDVAVGSTHCLALTD 712



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  Y+WG  E G+LGHGD   + RP 
Sbjct: 3072 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLRPK 3129

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3130 LVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3189

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3190 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGLRGKKIVH 3247

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3248 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3307

Query: 242  VA 243
            VA
Sbjct: 3308 VA 3309



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4167 RGGSDGCKI-PMKIDSLTGLGVTKVE--CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4223

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4224 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4283

Query: 157  RCLV-SEVTATACGADFTVWLSSVE--GASILNAGLP-QYGQL 195
              L   ++   ACG+  T+  S+ +   A  L A +P +Y  L
Sbjct: 4284 AALQGKKINRVACGSAHTLAWSTSKPTNAGKLPAQVPMEYNHL 4326



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3228 DVHVRKPQMVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3285

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3286 PTLVQGLEGQKITRVACGSSHSVAWT 3311



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 68/187 (36%), Gaps = 49/187 (26%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P  I +L+   IVK+A   +  H +A+ S G V++WG G  GRLGH +      P  +  
Sbjct: 470 PMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVFSWGCGDGGRLGHGDATYLEEPTMIAA 529

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
           F           I+ GS  S+     G+LY                              
Sbjct: 530 FNGKQAGKHVVHIACGSTYSAVITIDGELY------------------------------ 559

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                          +WG   YG LG+G    +    P  V  L+G+ V+ VACG G + 
Sbjct: 560 ---------------TWGRGNYGRLGHG--SSEDQTTPMLVTALKGLKVVDVACGSGDAQ 602

Query: 398 VIVDRTN 404
            +    N
Sbjct: 603 TLAVTEN 609



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 108/261 (41%), Gaps = 44/261 (16%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAVGRRKGAL----DGNL-----------VS 46
           LE   M+    GK+ G  +  + CGST + AV    G L     GN             +
Sbjct: 521 LEEPTMIAAFNGKQAGKHVVHIACGST-YSAVITIDGELYTWGRGNYGRLGHGSSEDQTT 579

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P +V +
Sbjct: 580 PMLVTALKGLKVVDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEK 639

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L    I K   G   +V +T+DG    +G   + +LG G+  +      VR         
Sbjct: 640 LQDLDIVKVCCGSQFSVALTKDGQVYTWGKGDNQRLGHGTDEH------VR--------- 684

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY----EAQPRPRA 222
                F   L +++G  +++  +     L    D E ++  S+ KL +      + +P+A
Sbjct: 685 -----FPKLLDTLQGKKVVDVAVGSTHCLALTDDGEVHSWGSNDKLQHFDTLSNKKQPKA 739

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV ++CG   + A
Sbjct: 740 LPGL--KHIVGISCGPGQSFA 758



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3933 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPTEALA---TLRPVQLIGGEQTLFAVT 3989

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    +R   ++SG  H   + ++   
Sbjct: 3990 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 4048

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 4049 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGVEVVDIAAGGAHSACIT 4095


>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
          Length = 4746

 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3939 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3998

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3999 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4058

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4059 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4104

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4105 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4164

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4165 ----AIATGSLHCVCCTEDGEVYTWG 4186



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2922 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2979

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2980 FSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEY 3039

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3040 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3099

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3100 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3145

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3146 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3193



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2884 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 2941

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2942 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3001

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              ++ L ++ +   A G+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3002 RLIQALKTKRIRDIAYGSSHSAPLTS--SGELYTWGLGEYGRLGHGDNT----------- 3048

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3049 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3105

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3106 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3161

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3162 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3219

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3220 QKITRVACGSSHSV 3233



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3864 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3923

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3924 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3981

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3982 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4027

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4028 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4085

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4086 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4144

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4145 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4172



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 387 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 446

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 447 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 506

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 507 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 558

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 559 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 612

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 613 LLEGLQGKKVID----VAAGSTHCLVLTEDSEVHSWG 645



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2868 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2925

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 2926 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 2983

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +A G++H+  + S G
Sbjct: 2984 EGDDGKLGHFSRMNCD--------------KPRLIQALKTKRIRDIAYGSSHSAPLTSSG 3029

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3030 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3085

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3086 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3145

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3146 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3189



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3911 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3970

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3971 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4028

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4029 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4074

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4075 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4130

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4131 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4190

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4191 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4226



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 436 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 481

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 482 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 539

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 540 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 597

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H LV+ + + V
Sbjct: 598 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 641



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3862 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3920

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3921 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3966

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3967 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4022

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4023 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4080

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4081 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4125



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4091 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4147

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4148 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4207

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4208 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4248



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  ++ L    IR +A G  S H   +   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2997 NCDKPRLIQALKTKRIRDIAYG--SSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3054

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3055 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3114

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3115 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3172

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3173 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3232

Query: 242  VA 243
            VA
Sbjct: 3233 VA 3234



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3153 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3210

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3211 PTLVQGLEGQKITRVACGSSHSVAWT 3236



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 353 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 412

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 413 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 472

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 473 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 530

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 531 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 584



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  +   C S   +A+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 567 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 626

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG-ADFTV 174
           AG +H +V+TED    ++G N   Q        + EP+    L S+ +   ACG A    
Sbjct: 627 AGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 686

Query: 175 WLSSVE 180
           W S  E
Sbjct: 687 WSSCSE 692



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 446 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 505

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 506 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 565

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 566 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 612

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 613 -------LLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTA 665

Query: 223 IAALAGETIVKVACGTNHTVA 243
              L  + IV +ACG   + A
Sbjct: 666 FPGLDSKHIVGIACGPAQSFA 686



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3857 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3913

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3914 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3972

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 3973 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4015


>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
          Length = 4836

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIQALKTKRIRDIAYGSSHSAPLTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              ++ L ++ +   A G+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIQALKTKRIRDIAYGSSHSAPLTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLVLTEDSEVHSWG 735



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 150/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +A G++H+  + S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIQALKTKRIRDIAYGSSHSAPLTSSG 3119

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4118

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 106/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H LV+ + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLVLTEDSEV 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4012 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4112

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4170

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4171 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  ++ L    IR +A G  S H   +   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIQALKTKRIRDIAYG--SSHSAPLTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  +   C S   +A+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG-ADFTV 174
           AG +H +V+TED    ++G N   Q        + EP+    L S+ +   ACG A    
Sbjct: 717 AGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTAFPGLDSKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLVLTEDSEVHSWGSNDQCQHFDTLGVTKPEPTA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
              L  + IV +ACG   + A
Sbjct: 756 FPGLDSKHIVGIACGPAQSFA 776



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4004 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105


>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
            [Papio anubis]
          Length = 4123

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3316 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3375

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3376 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3435

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3436 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3481

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3482 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3541

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 3542 ----AIATGSLHCVCCTEDGEVYTWG 3563



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2300 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2357

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2358 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2417

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2418 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2477

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2478 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2523

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2524 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 2571



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2262 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 2319

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2320 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 2379

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 2380 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 2426

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2427 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2483

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2484 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2539

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 2540 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 2597

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 2598 QKITRVACGSSHSV 2611



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3241 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3300

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3301 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3358

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3359 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3404

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 3405 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DIACGSGDAQTLCLTDDDTVWSWGDGD 3462

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3463 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3521

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3522 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 3549



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 159/363 (43%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2233 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 2286

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 2287 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGR 2346

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 2347 HATAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 2390

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 2391 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 2446

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 2447 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 2506

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 2507 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDS 2564

Query: 403  TNV 405
              V
Sbjct: 2565 GQV 2567



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3288 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 3347

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 3348 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 3405

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 3406 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTD 3451

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 3452 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 3507

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3508 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3567

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 3568 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3603



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 121/286 (42%), Gaps = 38/286 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3239 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 3297

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3298 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3343

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3344 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3399

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3400 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDIACGSGDAQTLCLTDDDTVWS 3457

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ +
Sbjct: 3458 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 3501



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2375 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 2432

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2433 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2492

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 2493 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2550

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 2551 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2610

Query: 242  VA 243
            VA
Sbjct: 2611 VA 2612



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3468 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3524

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3525 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3584

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 3585 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 3625



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2531 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 2588

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 2589 PTLVQGLEGQKITRVACGSSHSVAWT 2614



 Score = 42.0 bits (97), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 75/183 (40%), Gaps = 18/183 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A G      + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2229 SGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2285

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2286 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2342

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 2343 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2400

Query: 397  LVI 399
              +
Sbjct: 2401 AAL 2403



 Score = 38.9 bits (89), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3234 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3290

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3291 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3349

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 3350 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3392


>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
          Length = 4817

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/269 (31%), Positives = 129/269 (47%), Gaps = 19/269 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            ++ +PT +  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP 
Sbjct: 4008 SVATPTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPR 4067

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
             +  L   ++    AG +H+  +T  G   ++G  ++G+LG G   ++ +P  V  L   
Sbjct: 4068 AIESLRGKEVVDIAAGGAHSACITSTGELYSWGKGRYGRLGHGDSEDQTKPKLVDALKGY 4127

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             VT  ACG+     L   +  S+ + G   YG+LG G  +                  P 
Sbjct: 4128 RVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKV--------------PM 4173

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I AL G  ++KV CG+  +VA+   G VYTWG G Y RLGH  +     PRR    Q  
Sbjct: 4174 KIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQGK 4233

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             ++     I+ GS++       G++Y WG
Sbjct: 4234 KIVS----IACGSLHCVACTDAGEVYTWG 4258



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 122/260 (46%), Gaps = 19/260 (7%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L  ++I  +AA     HC+A+  EG  Y+WG  + G+LGHGD +  D P +++EL    +
Sbjct: 473 LADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKSV 532

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
                G  H+  +T  G    +G    G+LG GS  + + P+ V  L+   V   ACG+ 
Sbjct: 533 VNVACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILTPALVSGLLGVTVVDVACGSG 592

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
               ++  +  S+ + G  +YG+LG G                E    P+ +  L G  +
Sbjct: 593 DAQTIALADTGSVYSWGDGEYGKLGRG--------------GSEGCKAPKLVDKLQGLDV 638

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
            +V CG  ++ AV   G V+TWG G   +LGH  ++    PR+V+     +V      +S
Sbjct: 639 TRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHV----TSLS 694

Query: 292 AGSVNSSCTAGGGQLYMWGK 311
            GS +   T   G+L  WG+
Sbjct: 695 LGSHHCLATTEEGELLSWGR 714



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 21/294 (7%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G+L  CG      +G   G   GN+  P +L  L    I+ VA      H +A+ V+G
Sbjct: 2964 QDGKLFACGEATNGRLGL--GISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAMALTVDG 3021

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  + G+LGH  ++  D+P ++  L   +++    G SH+  +  +G+   +G  
Sbjct: 3022 KVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAIISNGDLYTWGLG 3081

Query: 138  KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    ++ P  V+ L  + V   A G+     L+  +  ++ + G   +G+LG
Sbjct: 3082 EYGRLGHGDNTTQLRPKLVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLG 3141

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  I  L G  + ++ CG   ++A+   G V+TWG G
Sbjct: 3142 RG--------------GSEGCSVPHPIERLNGVGVCQIECGAQFSLALTKSGQVWTWGKG 3187

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             Y RLGH        P+ V+  +   V      ++ G+++       GQ+Y WG
Sbjct: 3188 DYFRLGHGTDAHVRKPQLVETLKGKKV----THVAVGALHCLSVLDNGQVYAWG 3237



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 156/358 (43%), Gaps = 35/358 (9%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAG 118
            V A  V C     D++ + + WG N++ QLG   G KI+   P I   LS  K  +   G
Sbjct: 2898 VMAKKVKCGSGVKDIQTQVFVWGLNDKDQLGGPKGSKIK--TPGINETLSTLKCVQIVGG 2955

Query: 119  RSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL---VSEVTATACGADFTV 174
                  VT+DG   A G   +G+LG G S  N  +P  +  L   V +  A   G    +
Sbjct: 2956 SKSLFCVTQDGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHSGGRHAM 3015

Query: 175  WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
             L +V+G  + + G    G+LGH +    +              +PR I AL  + +  +
Sbjct: 3016 AL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALRSKRVRDI 3059

Query: 235  ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            ACG +H+ A+ S G +YTWG G YGRLGH +   +  P+ V   +   V+  +  + +  
Sbjct: 3060 ACGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQRVI--QVALGSRD 3117

Query: 295  VNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
              +      G +Y W     GKL   G +    P P+  L+G  +  ++ G         
Sbjct: 3118 AQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGVCQIECGAQFSLALTK 3177

Query: 349  SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            S  + +WG   Y  LG+G         P+ V+ L+G  V  VA G  H L ++D   V
Sbjct: 3178 SGQVWTWGKGDYFRLGHGTDAHVRK--PQLVETLKGKKVTHVAVGALHCLSVLDNGQV 3233



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 154/350 (44%), Gaps = 37/350 (10%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--A 117
            +  G  S  CV  D  G+ +  G    G+LG G       +P  ++ LS+Y IKK    +
Sbjct: 2952 IVGGSKSLFCVTQD--GKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVIKKVAVHS 3009

Query: 118  GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
            G  H + +T DG   ++G    G+LG  S  N  +P  +  L S+ V   ACG   +  +
Sbjct: 3010 GGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALRSKRVRDIACGGSHSAAI 3069

Query: 177  SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
              +    +   GL +YG+LGHG +                Q RP+ + AL G+ +++VA 
Sbjct: 3070 --ISNGDLYTWGLGEYGRLGHGDNT--------------TQLRPKLVKALEGQRVIQVAL 3113

Query: 237  GTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            G+    T+A+   G VY+WG G +G+LG    +   VP  ++      V      I  G+
Sbjct: 3114 GSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLNGVGV----CQIECGA 3169

Query: 295  VNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGAD 348
              S      GQ++ WGK       +G D    KP +   L G  +  +  G +H     D
Sbjct: 3170 QFSLALTKSGQVWTWGKGDYFRLGHGTDAHVRKPQLVETLKGKKVTHVAVGALHCLSVLD 3229

Query: 349  SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            +  + +WG   +G+ G        +  P  V  LEG  +  VACG  HS+
Sbjct: 3230 NGQVYAWGDNDHGQQGNS--TTTVNRKPALVQGLEGCKISRVACGSSHSI 3277



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 146/335 (43%), Gaps = 30/335 (8%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G+ + WG N RGQLG  +  +   P     L+  +  +   G      +T DG   A G+
Sbjct: 3936 GQIWGWGHNHRGQLGGVEGAKVKLPVSCETLATMRPVQLIGGEQTLFSITGDGKVCATGY 3995

Query: 137  NKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+ +  +        A   G    + LS+ EG  + + G  + G
Sbjct: 3996 GAGGRLGIGGTDSVATPTLIESIQHVFIRKVAINSGGKHCLALSA-EG-EVYSWGEGEDG 4053

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPRAI +L G+ +V +A G  H+  + S G +Y+W
Sbjct: 4054 KLGHGNRSPCD--------------RPRAIESLRGKEVVDIAAGGAHSACITSTGELYSW 4099

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ VD  +   V   +    +G   + C      ++ W    
Sbjct: 4100 GKGRYGRLGHGDSEDQTKPKLVDALKGYRV--TDVACGSGDAQTLCITDDDSVWSWGDGD 4157

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4158 YGKLGRGGSDGCKVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4216

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              +     P++   L+G  ++S+ACG  H +   D
Sbjct: 4217 -TEDHIRRPRRCTTLQGKKIVSIACGSLHCVACTD 4250



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/309 (27%), Positives = 137/309 (44%), Gaps = 34/309 (11%)

Query: 101  PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
            PT++  +    I+K    +G  H + ++ +G   ++G  + G+LG G+      P  +  
Sbjct: 4012 PTLIESIQHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRAIES 4071

Query: 159  LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L   EV   A G   +  ++S     + + G  +YG+LGHG        DS      E Q
Sbjct: 4072 LRGKEVVDIAAGGAHSACITST--GELYSWGKGRYGRLGHG--------DS------EDQ 4115

Query: 218  PRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             +P+ + AL G  +  VACG+    T+ +     V++WG G YG+LG        VP ++
Sbjct: 4116 TKPKLVDALKGYRVTDVACGSGDAQTLCITDDDSVWSWGDGDYGKLGRGGSDGCKVPMKI 4175

Query: 276  DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLS 329
            D  Q   V+     +  GS  S      G +Y WGK     L +  +D +  P+    L 
Sbjct: 4176 DALQGLGVIK----VECGSQFSVALTKSGAVYTWGKGDYHRLGHGTEDHIRRPRRCTTLQ 4231

Query: 330  GWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
            G  +  +  G++H     D+    +WG    G+LG G     +   P+ V  L+G  +  
Sbjct: 4232 GKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKINR 4289

Query: 389  VACGYGHSL 397
            VACG  HSL
Sbjct: 4290 VACGSAHSL 4298



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 99/224 (44%), Gaps = 21/224 (9%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    +R +A  C   H  A+   G  YTWG  E G+LGHGD   + RP 
Sbjct: 3041 NCDKPRLIEALRSKRVRDIA--CGGSHSAAIISNGDLYTWGLGEYGRLGHGDNTTQLRPK 3098

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L   ++ +   G   + T+ +T+ G   ++G    G+LG G       P P+  L 
Sbjct: 3099 LVKALEGQRVIQVALGSRDAQTLALTDSGTVYSWGDGDFGKLGRGGSEGCSVPHPIERLN 3158

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
               V    CGA F++ L+  +   +   G   Y +LGHGTD                  +
Sbjct: 3159 GVGVCQIECGAQFSLALT--KSGQVWTWGKGDYFRLGHGTDAHVR--------------K 3202

Query: 220  PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            P+ +  L G+ +  VA G  H ++V   G VY WG   +G+ G+
Sbjct: 3203 PQLVETLKGKKVTHVAVGALHCLSVLDNGQVYAWGDNDHGQQGN 3246



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 150/364 (41%), Gaps = 45/364 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +PT + PL       +   C S   + +   GR Y    +   Q  H           +S
Sbjct: 423 TPTTI-PLPNDLDDIIQVACSSNSLLILLRTGRVYKMTNSAEPQSMHE----------IS 471

Query: 106 ELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SE 162
            L+  +I K  A    SH + +T +G+  ++G    G+LG G       P  +  L    
Sbjct: 472 TLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTVTCDSPMLINELHGKS 531

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   ACG+  +  +++     +   G   +G+LG G+  +  T              P  
Sbjct: 532 VVNVACGSHHSAAITA--SGELFTWGRGSFGRLGLGSTEDILT--------------PAL 575

Query: 223 IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           ++ L G T+V VACG+    T+A+   G VY+WG G YG+LG    +    P+ VD  Q 
Sbjct: 576 VSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPKLVDKLQG 635

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWM-YPKPLMDLSGWNLR 334
            +V      +  G   S+     G ++ WG     KL +  ++ + +P+ +  L+G ++ 
Sbjct: 636 LDV----TRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGKHVT 691

Query: 335 CMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G+ H     +    +SWG    G+LG G  G K  A P     L G  +I + C  
Sbjct: 692 SLSLGSHHCLATTEEGELLSWGRNDKGQLGEGHTGLK--AEPAFAASLLGKCIIGITCSS 749

Query: 394 GHSL 397
             + 
Sbjct: 750 AQTF 753



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 25/217 (11%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +G+LGHG   +  T DS           P  I  L G+++V VACG++H+ A+ + G ++
Sbjct: 507 FGKLGHG---DTVTCDS-----------PMLINELHGKSVVNVACGSHHSAAITASGELF 552

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
           TWG G +GRLG    +D   P  V       V+  +    +G   +   A  G +Y WG 
Sbjct: 553 TWGRGSFGRLGLGSTEDILTPALVSGLLGVTVV--DVACGSGDAQTIALADTGSVYSWGD 610

Query: 311 ----KLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
               KL   G +      L+D L G ++  +  G  +   V  + +  +WG+ +  +LG+
Sbjct: 611 GEYGKLGRGGSEGCKAPKLVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGH 670

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           G   ++    P++V+ L G HV S++ G  H L   +
Sbjct: 671 G--TEEHVRFPRQVETLAGKHVTSLSLGSHHCLATTE 705



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 20/202 (9%)

Query: 211 KLAYEAQPRP-RAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           K+   A+P+    I+ LA   I+K+A  +  +H +A+ S+G VY+WG G +G+LGH +  
Sbjct: 457 KMTNSAEPQSMHEISTLADIEIIKLAAHSEGSHCLALTSEGDVYSWGNGDFGKLGHGDTV 516

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMY 321
               P  ++     +V+     ++ GS +S+     G+L+ WG+         + +D + 
Sbjct: 517 TCDSPMLINELHGKSVVN----VACGSHHSAAITASGELFTWGRGSFGRLGLGSTEDILT 572

Query: 322 PKPLMDLSGW---NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKK 377
           P  +  L G    ++ C  SG+      AD+ S  SWG  +YG+LG G  G +    PK 
Sbjct: 573 PALVSGLLGVTVVDVAC-GSGDAQTIALADTGSVYSWGDGEYGKLGRG--GSEGCKAPKL 629

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           VD L+G+ V  V CG  +S  +
Sbjct: 630 VDKLQGLDVTRVYCGPQYSAAV 651



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 87/202 (43%), Gaps = 17/202 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++++P  +  L+GV +  VA G      +A+   G  Y+WG  E G+LG G       P 
Sbjct: 569 DILTPALVSGLLGVTVVDVACGSGDAQTIALADTGSVYSWGDGEYGKLGRGGSEGCKAPK 628

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
           +V +L    + +   G  ++  V ++G    +G  +  +LG G+  +   P  V  L   
Sbjct: 629 LVDKLQGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHGTEEHVRFPRQVETLAGK 688

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            VT+ + G+     L++ E   +L+ G    GQLG G                  +  P 
Sbjct: 689 HVTSLSLGSHHC--LATTEEGELLSWGRNDKGQLGEGHTG--------------LKAEPA 732

Query: 222 AIAALAGETIVKVACGTNHTVA 243
             A+L G+ I+ + C +  T A
Sbjct: 733 FAASLLGKCIIGITCSSAQTFA 754



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 4/135 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG + 
Sbjct: 4163 RGGSDGCKV-PMKIDALQGLGV--IKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGTED 4219

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP   + L   KI     G  H V  T+ G    +G N  GQLG G+      P  V
Sbjct: 4220 HIRRPRRCTTLQGKKIVSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4279

Query: 157  RCLV-SEVTATACGA 170
              L   ++   ACG+
Sbjct: 4280 AALQGKKINRVACGS 4294



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 39/77 (50%), Gaps = 2/77 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P R   L G  I  V+  C S HCVA    G  YTWG N+ GQLG G      RP +V+ 
Sbjct: 4224 PRRCTTLQGKKI--VSIACGSLHCVACTDAGEVYTWGDNDEGQLGDGTTNAIQRPRLVAA 4281

Query: 107  LSKYKIKKAGAGRSHTV 123
            L   KI +   G +H++
Sbjct: 4282 LQGKKINRVACGSAHSL 4298


>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Cricetulus griseus]
          Length = 4836

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4029 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4088

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 4089 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 4148

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4149 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4194

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4195 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4254

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4255 ----AIATGSLHCVCCTEDGEVYTWG 4276



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3012 GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 3283



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3954 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4013

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4014 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4071

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 4072 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 4117

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 4118 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4175

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4176 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4234

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4235 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4262



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 129/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + ++++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    ++KV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 152/346 (43%), Gaps = 39/346 (11%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2958 IRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015

Query: 133  AFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            + G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + + G
Sbjct: 3016 SCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVFSWG 3073

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S G
Sbjct: 3074 EGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALTSSG 3119

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    G +
Sbjct: 3120 ELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDEGLV 3175

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG   Y
Sbjct: 3176 FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3236 FRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQV 3279



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4001 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4060

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4061 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 4118

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4119 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 4164

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4165 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4220

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4280

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 4281 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 4316



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 526 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 571

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 572 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 629

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 630 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIA--LTKDGQVYSWGKGDN 687

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 688 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3952 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4011

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4012 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4056

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4057 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 4112

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 4170

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4171 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4215



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 3262

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4181 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4237

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4238 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4297

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 4298 AALQGKKVNRVACGSAHTLAWSTSKPAS--------AGKLPAQVPMEYN 4338



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 87/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +++VAC                                           
Sbjct: 443 PIQCEGLASLGVMQVACAEKRFLILSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + VI V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALT 674



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVIKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPTA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 74/183 (40%), Gaps = 18/183 (9%)

Query: 228  GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            G  I K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+   
Sbjct: 2942 GSLIRKKTAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ-- 2997

Query: 288  AVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMDS 338
              ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + S
Sbjct: 2998 --VAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVHS 3055

Query: 339  GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS 
Sbjct: 3056 GGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHSA 3113

Query: 398  VIV 400
             + 
Sbjct: 3114 ALT 3116



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3947 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4003

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4004 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4062

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 4063 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 4105


>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
          Length = 4853

 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            ST + A GR       +++ PT L  +  V I+ VA      HC+A+  EG  Y+WG  +
Sbjct: 4050 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGD 4109

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+K+  DRP ++ +L   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4110 DGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4169

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4170 SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4229

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  +VKV CG+  +VA+   G VYTWG G Y RLGH  
Sbjct: 4230 --------------PLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4275

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++    +  G+++ WG
Sbjct: 4276 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4316



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 152/342 (44%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P     LS  +  +   G      VT DG   +
Sbjct: 3991 DGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKIYS 4050

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A + G    + LSS EG  + + G  
Sbjct: 4051 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSS-EG-HVYSWGEG 4108

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG    Y+              RP+ I  L G  IV +ACG +H+ A+ S G++
Sbjct: 4109 DDGKLGHGNKVSYD--------------RPKLIEDLLGVEIVDIACGGHHSAAITSAGWL 4154

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH +  D+  P+ V+  Q   V+  +    +G   + C      ++ W 
Sbjct: 4155 YTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4212

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG
Sbjct: 4213 DGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4272

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4273 HGT--DDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4312



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/350 (29%), Positives = 163/350 (46%), Gaps = 36/350 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P  +  LS++ IKK    +G  H + +T+DG 
Sbjct: 3060 VSQEGKLYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGK 3119

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 3120 VFSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIAS--NGELYTWGL 3177

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG                  Q RP+ + AL G  +V+VACG+    T+A+ + 
Sbjct: 3178 GEYGRLGHGDTI--------------TQTRPKLVQALIGHRVVQVACGSRDAQTMALTTD 3223

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            GYVY+WG G +G+LG       + P  VD      V+  E     G+  S      G+++
Sbjct: 3224 GYVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNNLGVIQVE----CGAQFSLALTKYGEVW 3279

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    KP +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 3280 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 3339

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
            + G G         P  V  LE   V  V+CG  HS+  V+VD+ + G +
Sbjct: 3340 QQGNGTTSVNRK--PSLVHDLEDARVNRVSCGSSHSIAWVLVDQPSNGNQ 3387



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 116/244 (47%), Gaps = 24/244 (9%)

Query: 42   GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
            GN VS   P  +  L+GV+I  V   C   H  A+   G  YTWG+   G+LGHGD   +
Sbjct: 4116 GNKVSYDRPKLIEDLLGVEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 4173

Query: 99   DRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
             RP +V  L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +
Sbjct: 4174 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 4233

Query: 157  RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
              L    V    CG+ F+V L+     ++   G   Y +LGHGTD+              
Sbjct: 4234 DSLAGLGVVKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR----------- 4280

Query: 216  AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               RPR +AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V
Sbjct: 4281 ---RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4337

Query: 276  DVFQ 279
               Q
Sbjct: 4338 HALQ 4341



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ VA      H +A+  +G+ 
Sbjct: 3064 GKLYACGE---GTNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKV 3120

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ I  D+P ++  L   +I+    G  H+  +  +G    +G  ++
Sbjct: 3121 FSWGEGEDGKLGHGNCISLDKPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3180

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +  P  V+ L+   V   ACG+     ++      + + G   +G+LG  
Sbjct: 3181 GRLGHGDTITQTRPKLVQALIGHRVVQVACGSRDAQTMALTTDGYVYSWGDGDFGKLGRG 3240

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  +  L    +++V CG   ++A+   G V+TWG G 
Sbjct: 3241 GSDGCYT---------------PLLVDRLNNLGVIQVECGAQFSLALTKYGEVWTWGKGD 3285

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLGH        P  V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3286 YFRLGHGNDHHVRKPTLVEGLRGKKIIH----VAVGALHCLAVTDTGQVYAWG 3334



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 38/340 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y+ G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4041 AVTADGKIYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSSEG 4100

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+  +   P  +  L+  E+   ACG   +  ++S     +   G
Sbjct: 4101 HVYSWGEGDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITS--AGWLYTWG 4158

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG  ++              Q RP+ + AL    ++ VACG+    T+ V  
Sbjct: 4159 KGRYGRLGHGDSDD--------------QLRPKVVEALQDYKVIDVACGSGDAQTLCVTD 4204

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+  E     GS  S      G +
Sbjct: 4205 DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVE----CGSQFSVALTRSGAV 4260

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H    +D     +WG    
Sbjct: 4261 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4320

Query: 360  GELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4321 GQLGDG----TTSALHRPRLVHALQGKKITRVACGSAHTL 4356



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 145/346 (41%), Gaps = 50/346 (14%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     +V+++G   A G  
Sbjct: 3015 YVWGLNDKDQLGGLKGSKIKL--PVYSETLSKLKPIHIAGGSKTLFIVSQEGKLYACGEG 3072

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP  +  L   V +  A   G    + L+  +   + + G  + G+
Sbjct: 3073 TNGRLGLGDDNNMCEPKAIPFLSQFVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 3130

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG     +              +P+ I  L  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 3131 LGHGNCISLD--------------KPKLIEVLKSKRIRDIACGSGHSAAIASNGELYTWG 3176

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +   +  P+ V     + V+     ++ GS ++   A    G +Y W   
Sbjct: 3177 LGEYGRLGHGDTITQTRPKLVQALIGHRVVQ----VACGSRDAQTMALTTDGYVYSWGDG 3232

Query: 310  --GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI--------SWGHAQY 359
              GKL   G D  Y   L+D      R  + G +    GA  S          +WG   Y
Sbjct: 3233 DFGKLGRGGSDGCYTPLLVD------RLNNLGVIQVECGAQFSLALTKYGEVWTWGKGDY 3286

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P  V+ L G  +I VA G  H L + D   V
Sbjct: 3287 FRLGHG--NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 3330



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 118/266 (44%), Gaps = 19/266 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       I  +A+     H +A+  +G  Y+WG  + G+LGHGD I  D P ++  
Sbjct: 557 PQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEA 616

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L +  I     G +++  ++ +G    +G   +G+LG G+  + + P+ V  L    V  
Sbjct: 617 LLEKNIIFIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGHTVVH 676

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G  +   T              P+ +  
Sbjct: 677 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--------------PKIVDK 722

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    +VKV CG+  + A+ + G VYTWG G   RLGH  ++    P+ ++  +   V  
Sbjct: 723 LLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDRKV-- 780

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
               +S G+ +         +Y WG+
Sbjct: 781 --KDLSVGTTHILALTEDQFVYGWGR 804



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+  +I F+A  C S +  A+   G  YTWGR   G+LGHG+      PT+V+ 
Sbjct: 611 PKLIEALLEKNIIFIA--CGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTT 668

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           L  + +     G+G S T+ VT  G   ++G   +G+LG G       P  V  L+   V
Sbjct: 669 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 728

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG+ F+  L++     +   G     +LGHG++              E    P+ I
Sbjct: 729 VKVFCGSQFSAALTA--HGEVYTWGKGDAYRLGHGSE--------------EHVRYPKVI 772

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
            +L    +  ++ GT H +A+    +VY WG   YG++
Sbjct: 773 ESLRDRKVKDLSVGTTHILALTEDQFVYGWGRNDYGQI 810



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 85/188 (45%), Gaps = 17/188 (9%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ +   + + I  +A   +  H +A+   G VY+WG G  GRLGH +      P+ ++ 
Sbjct: 557 PQRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTISYDEPKLIEA 616

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
               N++     I+ GS  S+  +  G+LY WG+         N DD M P  +  L G 
Sbjct: 617 LLEKNII----FIACGSTYSAALSANGELYTWGRGNYGRLGHGNFDDVMTPTLVTTLKGH 672

Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              ++ C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V+ 
Sbjct: 673 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVK 730

Query: 389 VACGYGHS 396
           V CG   S
Sbjct: 731 VFCGSQFS 738



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 5/156 (3%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4221 RGGSDGCKV-PLKIDSLAGLGV--VKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4277

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G+      P  V
Sbjct: 4278 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4337

Query: 157  RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLP 190
              L   ++T  ACG+  T+ W ++    S + A  P
Sbjct: 4338 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASTP 4373



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  PT +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3294 DHHVRKPTLVEGLRGKKIIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRK 3351

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P++V +L   ++ +   G SH++
Sbjct: 3352 PSLVHDLEDARVNRVSCGSSHSI 3374



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 49/117 (41%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++++PT +  L G  +  VA G      + V   G  ++WG  + G+LG G       P 
Sbjct: 659 DVMTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK 718

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           IV +L    + K   G   +  +T  G    +G     +LG GS  +   P  +  L
Sbjct: 719 IVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESL 775



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 23/173 (13%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----------EAVI 290
            T++ D  G +Y WG    G+LG  E     +P   +     + L P           AV 
Sbjct: 3987 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESL---SALRPIQLAGGEQTLFAVT 4043

Query: 291  SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGA 347
            + G + S+     G+L + G      D  M P  L  +    ++   + SG  H   + +
Sbjct: 4044 ADGKIYSTGYGAAGRLGIGGT-----DSVMIPTLLESIQHVFIKKVAVSSGGKHCIALSS 4098

Query: 348  DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +    SWG    G+LG+G   + S   PK ++ L G+ ++ +ACG  HS  I 
Sbjct: 4099 EGHVYSWGEGDDGKLGHG--NKVSYDRPKLIEDLLGVEIVDIACGGHHSAAIT 4149


>gi|119624859|gb|EAX04454.1| hCG42063, isoform CRA_a [Homo sapiens]
          Length = 329

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 139/303 (45%), Gaps = 52/303 (17%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           L  NL  P R   L GV IR V +G  + H + + +EG+ ++WGRNE+GQLGHGD  + +
Sbjct: 17  LGQNLWGPHRYGCLAGVRIRTVISGSCAAHSLLITMEGKLWSWGRNEKGQLGHGDTKRVE 76

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            P  +  L       A  G +HT+ +T+ G+  AFG NK GQLG  +  + ++P      
Sbjct: 77  APRFIEGLCHEVTMSAACGWNHTLALTKTGSVFAFGENKMGQLGLANQTDAVQPR----- 131

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                     AD                       LGH +D ++     + ++ Y+ +  
Sbjct: 132 ----------AD----------------------NLGHNSDGKFIF--GARRIEYDCELV 157

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  +A    +T           + V +K  V++WGFGGYGRLGH EQKDE V R V +F 
Sbjct: 158 PPRLAIFIEKT------KDGQILPVPNK-RVFSWGFGGYGRLGHAEQKDEMVRRLVKLFD 210

Query: 280 RNNVLP--PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
                P    + I AG   S   +  G L+       + +  MYPK + DL GW ++ + 
Sbjct: 211 ----FPWRGASQIYAGYTCSLAVSEVGGLFFRRATTTSRESAMYPKAVQDLCGWRIQSLA 266

Query: 338 SGN 340
            G 
Sbjct: 267 CGK 269


>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
          Length = 4839

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+   +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4092 SLRGIEVVDIAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L    +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4198 SLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4257

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4258 ----AIATGSLHCVCCTEDGEVYTWG 4279



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 3015 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKI 3072

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3132

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3193 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3239 FRLGHGTDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3286



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3034

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIFSWGEGDDGKLGHFSRMNCDKP 3094

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3141

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3142 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3199 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3254

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3312

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3313 QKITRVACGSSHSV 3326



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            +R  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2948 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3001

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
              + L +V+G  I + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3062 HAMAL-TVDG-KIFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3105

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3106 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3161

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3279

Query: 403  TNV 405
              V
Sbjct: 3280 GQV 3282



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    IVKV CG+  ++A+   G VYTWG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  +   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/329 (27%), Positives = 144/329 (43%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G ++TW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDIAAGGAHSACITAAGDLFTW 4120

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+   +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4237

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4238 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4265



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDIAAGGAHSACITA--AGDLFTWG 4121

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4122 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTDLGVVK----VECGSQFSVALTKSGAV 4223

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4283

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4284 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4319



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 143/353 (40%), Gaps = 48/353 (13%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C     + +   GR YT   N    LG         P +V  L+   I K  A   
Sbjct: 455 VQIACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVKIAAHSD 504

Query: 121 --HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFT 173
             H + ++ +G   ++G    G+LG G      EP  +  L        V   ACG+ ++
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYS 564

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             +++ EG  +   G   YG+LGHG+               E Q  P  +  L G  ++ 
Sbjct: 565 AAITA-EG-ELYTWGRGNYGRLGHGSS--------------EDQTIPMLVTGLKGLKVID 608

Query: 234 VACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           V+CG+    T+AV   G V++WG G YG+LG         P+ ++  Q  +++     + 
Sbjct: 609 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVK----VR 664

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
            GS  S      GQ+Y WGK  N        +   YPK L  L G  +  + +G+ H   
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +  DS   SWG     +  +    + +   P  +  L+  H++ +ACG   S 
Sbjct: 725 LTEDSEVHSWGSND--QCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSF 775



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 535

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 536 LE-----EPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648

Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           PK    L DL    +RC    ++   +  D    +WG      LG+G   ++    PK +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 704

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
           + L+G  VI VA G  H L + + + V
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 118/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4015 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4059

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 4060 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----IAAGGAHSACITAAG 4115

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             L+ WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 4116 DLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 4173

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L  + V+ V CG   S+ + 
Sbjct: 4174 WGDGDYGKLGRG--GSDGCKVPMKIDSLTDLGVVKVECGSQFSVALT 4218



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3090 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3147

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3148 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3208 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVH 3265

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 242  VA 243
            VA
Sbjct: 3326 VA 3327



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 74/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L   D+  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4184 RGGSDGCKV-PMKIDSLT--DLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4240

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4241 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4300

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 4301 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4341



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWT 3329



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ YTWG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPAALPGLDTKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +V++AC                                           
Sbjct: 443 PIQCEGLANLGVVQIACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G V++WG G  GRLGH +      P+ +              I+ GS 
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + ++ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALT 674



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 106/257 (41%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
               I K   G   ++ +T+DG    +G   + +LG G+  +   P  +  L   +V   
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDV 715

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  T  L+  E + + + G            N+      ++++    +P P A+  L
Sbjct: 716 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPAALPGL 759

Query: 227 AGETIVKVACGTNHTVA 243
             + IV +ACG   + A
Sbjct: 760 DTKHIVGIACGPAQSFA 776



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  + K A G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2942 ANTGSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2999

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 3000 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3055

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 3056 VHSGGRHAMALTVDGKIFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 395  HSLVIV 400
            HS  I 
Sbjct: 3114 HSAAIT 3119



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4007 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ +A G  HS  I 
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDIAAGGAHSACIT 4112


>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
          Length = 4837

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 155/355 (43%), Gaps = 66/355 (18%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT +  L  V I+ VA      HC+A+  +G  ++WG  E G+LGHG++   DRP ++ 
Sbjct: 4012 APTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE 4071

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             LS   +     G +H+  +T  G+ L +G  ++G+LG G   ++++P  V  L+     
Sbjct: 4072 ALSGIGVIDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGYRAI 4131

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4132 DIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI--------------PMKIE 4177

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +LAG  ++KV CG+  +VA+   G VYTWG G Y RLGH        P++V   Q   ++
Sbjct: 4178 SLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKII 4237

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
                 I+ GS++    +  G+++ WG    + D+                          
Sbjct: 4238 S----IATGSLHCVACSDSGEVFTWG----DNDE-------------------------- 4263

Query: 345  VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                           G+LG G     +   P+ V  L+G H++ V CG  H+L +
Sbjct: 4264 ---------------GQLGDGTV--TAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4301



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 148/336 (44%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            + WG N RGQLG  D  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 3940 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 3999

Query: 140  GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+ V  L   + +  A   G    + LSS     + + G  + G+LG
Sbjct: 4000 GRLGIGGTDSVSAPTLVESLQHVIIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4057

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG  + Y+              RP+ I AL+G  ++ +ACG+ H+  + S+G+V TWG G
Sbjct: 4058 HGNRDSYD--------------RPKLIEALSGIGVIDIACGSAHSACITSQGHVLTWGKG 4103

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4104 RYGRLGHGDSEDQLQPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4161

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S S  +WG   Y  LG+G    
Sbjct: 4162 LGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NT 4219

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                 PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 4220 DHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEV 4255



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 133/294 (45%), Gaps = 22/294 (7%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G+L  CG       GR     + N+ +P ++  L    ++ VA      H +A+ ++G
Sbjct: 2942 QDGKLYACGE---GTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDG 2998

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  E G+LGHG+++  ++P ++  L   +++    G SH+  +T  G    +G  
Sbjct: 2999 KVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRDIACGSSHSAAITSSGELYTWGLG 3058

Query: 138  KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    +++P  V  L    V   ACG+     L   E   + + G   +G+LG
Sbjct: 3059 EYGRLGHGDNCTQLKPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3118

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  +  L    ++++ CG   ++A+   G V+TWG G
Sbjct: 3119 RG--------------GSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKG 3164

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             Y RLGH   +    P  +   +   V+     ++ G+++       GQ+Y WG
Sbjct: 3165 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVYAWG 3214



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 173/375 (46%), Gaps = 41/375 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--NERGQLGHGD 94
            G L G+ V  PT    L  +    +A G  S   V+ D  G+ Y  G   N R  LGH +
Sbjct: 2906 GGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD--GKLYACGEGTNGRLGLGHNN 2963

Query: 95   KIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
             +    P  V  L++Y +KK    +G  H + +T DG   ++G  + G+LG G+     +
Sbjct: 2964 NV--PTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3021

Query: 153  PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P  +  L ++ V   ACG+  +  ++S     +   GL +YG+LGHG        D+  +
Sbjct: 3022 PKLIESLRTKRVRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG--------DNCTQ 3071

Query: 212  LAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
            L      +P+ +  L G  +V+VACG+    T+ +  +G V++WG G +G+LG    +  
Sbjct: 3072 L------KPKLVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGC 3125

Query: 270  WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PK 323
             VP +V+      V+     I  G+  S      G+++ WGK     L +  D  +  P 
Sbjct: 3126 SVPHQVERLNSVGVMQ----IECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPT 3181

Query: 324  PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            P+  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  L+
Sbjct: 3182 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTVVNKKPNLVLGLD 3239

Query: 383  GMHVISVACGYGHSL 397
            G+ V  VACG  HS+
Sbjct: 3240 GVFVNRVACGSSHSV 3254



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 151/344 (43%), Gaps = 34/344 (9%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            ++  +   WG N++ QLG   G K++   PT  S LS+ K      G     +V++DG  
Sbjct: 2889 EISSKVLVWGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKL 2946

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  V  L   V +  A   G    + L +++G  + + G
Sbjct: 2947 YACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMAL-TLDG-KVFSWG 3004

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG            +L  E   +P+ I +L  + +  +ACG++H+ A+ S G
Sbjct: 3005 EGEDGKLGHGN-----------RLTLE---KPKLIESLRTKRVRDIACGSSHSAAITSSG 3050

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             +YTWG G YGRLGH +   +  P+ V   Q + V+  +    +    + C    G ++ 
Sbjct: 3051 ELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHRVV--QVACGSRDAQTLCLTEEGLVFS 3108

Query: 309  W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G +    P  +  L+   +  ++ G         S  + +WG   Y  
Sbjct: 3109 WGDGDFGKLGRGGSEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYR 3168

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G    +    P  +  L G  VI VA G  H L + D   V
Sbjct: 3169 LGHG--TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV 3210



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/268 (26%), Positives = 125/268 (46%), Gaps = 21/268 (7%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P     L GV +  +AA C   H + +      ++WG  + G+LGHGD + ++ PT++
Sbjct: 555 IAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVWSWGAGDGGRLGHGDTVSKEHPTMI 614

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
             L + ++     G S++  +T  G    +G   +G+LG G+  +++ P+ V+ L S +V
Sbjct: 615 VGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKV 674

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A G+     +   +   +   G   +G+LG+G+ N                P P  I
Sbjct: 675 VDVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCN--------------GSPIPVQI 720

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L    + ++  G+  +VA+   G +YTWG G  GRLGH   +   VP+ V   +   +
Sbjct: 721 DTLVN--VSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRALEGKKI 778

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
               A ++ GS +       G+LY WG+
Sbjct: 779 ----ADVAVGSAHCLALTSSGELYGWGR 802



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 91/194 (46%), Gaps = 17/194 (8%)

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           ++  P  I  L  + +  + CG +++ A+   G ++TWG G YGRLGH    D+ VP +V
Sbjct: 607 SKEHPTMIVGLHEKQVCGIYCGASYSAAITIAGELFTWGRGTYGRLGHGNSDDKLVPTQV 666

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKN---NGDDWMYPKPLMD 327
              +   V+  +  + +G  +S C    G L+ WG     KL N   NG     P P+  
Sbjct: 667 QALKSYKVV--DVALGSGDAHSMCVTDNGLLFAWGDGDFGKLGNGSCNGS----PIPVQI 720

Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
            +  N+  + SG+     +  D +  +WG    G LG+G    + S +PK V  LEG  +
Sbjct: 721 DTLVNVSRIYSGSQFSVALSCDGTLYTWGKGHGGRLGHG--NSEHSNVPKLVRALEGKKI 778

Query: 387 ISVACGYGHSLVIV 400
             VA G  H L + 
Sbjct: 779 ADVAVGSAHCLALT 792



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 98/241 (40%), Gaps = 45/241 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+ +  +A  C S H   +  +G   TWG+   G+LGHGD   + +P +V  
Sbjct: 4067 PKLIEALSGIGVIDIA--CGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEA 4124

Query: 107  LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  Y+      G+G + T+ +T+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4125 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4184

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
                CG+ F+V L+     S+   G   Y +LGHG  +          L           
Sbjct: 4185 IKVECGSQFSVALT--RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4242

Query: 213  ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
                                          A  RPR + +L G+ IVKV CG+ HT+A+ 
Sbjct: 4243 SLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4302

Query: 246  S 246
            +
Sbjct: 4303 T 4303



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
             L  P  +  L    +R +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3018 TLEKPKLIESLRTKRVRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK 3075

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V+ L  +++ +   G   + T+ +TE+G   ++G    G+LG G       P  V  L 
Sbjct: 3076 LVTTLQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLN 3135

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
            S  V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3136 SVGVMQIECGAQFSLALT--KSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIH 3193

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G  + +VACG++H+
Sbjct: 3194 VAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSHS 3253

Query: 242  VA 243
            VA
Sbjct: 3254 VA 3255



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 4/145 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG+  
Sbjct: 4164 RGGSDGCKI-PMKIESLAGLGV--IKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTD 4220

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G++     P  V
Sbjct: 4221 HVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLV 4280

Query: 157  RCLV-SEVTATACGADFTVWLSSVE 180
            + L    +    CG+  T+ LS+ +
Sbjct: 4281 QSLQGKHIVKVICGSAHTLALSTYQ 4305



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 73/179 (40%), Gaps = 17/179 (9%)

Query: 59   RFVAAGCVSCHC-----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
            R  + G +   C     +A+   G  +TWG+ +  +LGHG      +PT +  L   K+ 
Sbjct: 3133 RLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVI 3192

Query: 114  KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
                G  H + VT+ G   A+G N HGQ GSG+     +P+ V  L    V   ACG+  
Sbjct: 3193 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACGSSH 3252

Query: 173  TVWLSSVEGASILNAGLP-----QYGQLG------HGTDNEYNTKDSSVKLAYEAQPRP 220
            +V  S  +  S  +   P         LG      H +D E  T    V      Q RP
Sbjct: 3253 SVAWSLPQNPSEKDKKEPVPFAVSKDPLGGHSLGIHASDTEPTTAHPQVGTVNPKQQRP 3311



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 6/137 (4%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++    V++  + +G  S   VA+  +G  YTWG+   G+LGHG+    + P +V 
Sbjct: 714 SPIPVQIDTLVNVSRIYSG--SQFSVALSCDGTLYTWGKGHGGRLGHGNSEHSNVPKLVR 771

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL-GSGSIRNEIEPSPVRCL--VSE 162
            L   KI     G +H + +T  G    +G N + Q+  SG  R+ I  SP+        
Sbjct: 772 ALEGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICPSGVSRDPIIHSPILTTPPTLR 831

Query: 163 VTATACG-ADFTVWLSS 178
           ++   CG A   VW  S
Sbjct: 832 ISGMTCGAAQSIVWCHS 848


>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
          Length = 5345

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 150/352 (42%), Gaps = 66/352 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT+L  +  V I+ +A      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++  
Sbjct: 4537 PTQLESIQHVFIKKLAVNSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCDRPRVIDS 4596

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L   ++    AG +H+  +T +G    +G  ++G+LG G   ++  P  V  L S  V  
Sbjct: 4597 LRGKEVVDIAAGGAHSACITANGELYTWGKGRYGRLGHGDSEDQPRPKLVEALKSYRVVD 4656

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G  +                  P  I  
Sbjct: 4657 MACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PMKIET 4702

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            L G+ ++KV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+ 
Sbjct: 4703 LQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHGSDDHVRRPRKVSALQNKKVID 4762

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                ++ GS++  C A                                 C D+G +    
Sbjct: 4763 ----VACGSLH--CVA---------------------------------CTDTGEV---- 4779

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   SWG    G+LG G     +   P+ V  L G  +  VACG  HSL
Sbjct: 4780 ------FSWGDNDEGQLGDG--TTNAIQRPRLVASLLGKKINRVACGSAHSL 4823



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 176/389 (45%), Gaps = 50/389 (12%)

Query: 29   CW-----DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
            CW     D +G  KG+    +  PT    L  +    +  G  S  CV    EG+ Y  G
Sbjct: 3468 CWGLNDKDQLGGPKGS---KIKLPTLNDNLSALRCVQIVGGSKSLFCVTQ--EGKVYACG 3522

Query: 84   RNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHG 140
                G+LG G        P  ++ LS+Y IKK    +G  H++ +T DG   ++G    G
Sbjct: 3523 EATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVFSWGEGDDG 3582

Query: 141  QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
            +LG  S  N  +P  +  L S+ V   ACG+  +  ++S     +   GL +YG+LGHG 
Sbjct: 3583 KLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITS--NGDLYTWGLGEYGRLGHGD 3640

Query: 200  DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGG 257
            +                Q +P+ + ALA E +V+VACG+    T+A+  +G VY+WG G 
Sbjct: 3641 NT--------------TQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGDGD 3686

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
            +G+LG    +   VP  VD  +   V      I  G+  S      GQ++ WGK      
Sbjct: 3687 FGKLGRGGSEGCNVPHEVDRLRDQKV----CQIECGAQFSLALTKSGQVWTWGKGDYFRL 3742

Query: 314  NNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
             +G D    KP +   L G  +  +  G +H     DS    +WG   +G+ G G     
Sbjct: 3743 GHGTDAHVRKPQIVEGLKGKKIVHVAVGALHCLAVTDSGQVFAWGDNDHGQQGNG----- 3797

Query: 371  SSAMPKK--VDILEGMHVISVACGYGHSL 397
            ++ + +K  + +LEG  +  VACG  HS+
Sbjct: 3798 TTTVNRKPALVVLEGYKISKVACGSSHSI 3826



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 154/345 (44%), Gaps = 32/345 (9%)

Query: 19   GGELLFCGS------TCWDAVGRRKG--ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
            G + LFC +       C +A   R G     G +  P ++  L    I+ VA      H 
Sbjct: 3505 GSKSLFCVTQEGKVYACGEATNGRLGLGITTGTVSVPRQITSLSQYVIKKVAVHSGGRHS 3564

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
            +A+  +G+ ++WG  + G+LGH  +   D+P ++  L   +++    G SH+  +T +G+
Sbjct: 3565 LALTTDGKVFSWGEGDDGKLGHFSRWNCDKPRLIEALKSKRVRDIACGSSHSAAITSNGD 3624

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
               +G  ++G+LG G    +++P  V+ L  E V   ACG+     L+  +   + + G 
Sbjct: 3625 LYTWGLGEYGRLGHGDNTTQLKPKQVKALAHERVVQVACGSRDAQTLALTDEGKVYSWGD 3684

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
              +G+LG G     N               P  +  L  + + ++ CG   ++A+   G 
Sbjct: 3685 GDFGKLGRGGSEGCNV--------------PHEVDRLRDQKVCQIECGAQFSLALTKSGQ 3730

Query: 250  VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
            V+TWG G Y RLGH        P+ V+  +   ++     ++ G+++       GQ++ W
Sbjct: 3731 VWTWGKGDYFRLGHGTDAHVRKPQIVEGLKGKKIVH----VAVGALHCLAVTDSGQVFAW 3786

Query: 310  GK----LKNNGDDWMYPKP-LMDLSGWNLRCMDSGNMHHFVGADS 349
            G      + NG   +  KP L+ L G+ +  +  G+ H    A +
Sbjct: 3787 GDNDHGQQGNGTTTVNRKPALVVLEGYKISKVACGSSHSIAWATT 3831



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 118/244 (48%), Gaps = 19/244 (7%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H + +  +G  ++WG  + G+LGHGD    + P +++ LS  ++ K   G S++V +T +
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTSN 689

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
           G   ++G    G+LG GS  ++  P  ++      +   ACG+     L+  +  ++ + 
Sbjct: 690 GEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSW 749

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   YG+LG G ++   T              P+ I  L G+ +V+V CG   ++A+   
Sbjct: 750 GDGDYGKLGRGGNDGCKT--------------PKVIEKLMGQDVVRVYCGNQFSMALTKS 795

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VYTWG G   RLGH  +     P++++      V      I+ GS++       G+LY
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKV----KDIAIGSLHCMAITEDGELY 851

Query: 308 MWGK 311
            WG+
Sbjct: 852 GWGR 855



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/339 (27%), Positives = 148/339 (43%), Gaps = 30/339 (8%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G+ + WG N RGQLG  D  +  +P     L+  +  +   G      VT +G   A G+
Sbjct: 4461 GQIWGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQLVGGEQTLFAVTAEGKVFATGY 4520

Query: 137  ---NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
                + G  G+ S+ +  +   ++ +  +  A   G    + LS+ EG  + + G  + G
Sbjct: 4521 GAGGRLGVGGTESVSHPTQLESIQHVFIKKLAVNSGGKHCLALSA-EG-EVYSWGEGEDG 4578

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G+ +V +A G  H+  + + G +YTW
Sbjct: 4579 KLGHGNRSPCD--------------RPRVIDSLRGKEVVDIAAGGAHSACITANGELYTW 4624

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  +   V+  +    +G   + C      ++ W    
Sbjct: 4625 GKGRYGRLGHGDSEDQPRPKLVEALKSYRVV--DMACGSGDAQTLCITDDDNVWSWGDGD 4682

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
             GKL   G D    P  +  L G  +  ++ G+        S S  +WG   Y  LG+G 
Sbjct: 4683 YGKLGRGGSDGCKVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKGDYHRLGHG- 4741

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                    P+KV  L+   VI VACG  H +   D   V
Sbjct: 4742 -SDDHVRRPRKVSALQNKKVIDVACGSLHCVACTDTGEV 4779



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 32/282 (11%)

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSV 179
           H + +T DG   ++G    G+LG G  +N  EP+ +  L   +V    CG+ ++V L+S 
Sbjct: 630 HYMGLTSDGEVFSWGNGDGGKLGHGDYQNHEEPALITGLSGKQVAKICCGSSYSVALTS- 688

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               + + G   +G+LGHG+               E Q  P  +    G  IV VACG+ 
Sbjct: 689 -NGEVYSWGKGNFGRLGHGSS--------------EDQTTPMLLKFFKGHRIVDVACGSG 733

Query: 240 --HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
              T+AV   G VY+WG G YG+LG         P+ ++     +V+     +  G+  S
Sbjct: 734 DAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVR----VYCGNQFS 789

Query: 298 SCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
                 G +Y WGK  N        D   +PK +  LS   ++ +  G++H   +  D  
Sbjct: 790 MALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKVKDIAIGSLHCMAITEDGE 849

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
              WG  + G+LG       +   P  +  +EG ++I VACG
Sbjct: 850 LYGWGRNEQGQLGNPSISNFTE--PTLIGGMEGKNIIGVACG 889



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 25/216 (11%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG               Y+    P  I  L+G+ + K+ CG++++VA+ S G VY+
Sbjct: 649 GKLGHGD--------------YQNHEEPALITGLSGKQVAKICCGSSYSVALTSNGEVYS 694

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
           WG G +GRLGH   +D+  P  +  F+ + ++  +    +G   +      G +Y W   
Sbjct: 695 WGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIV--DVACGSGDAQTLAVTDSGAVYSWGDG 752

Query: 310 --GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
             GKL   G+D    PK +  L G ++  +  GN        S  + +WG      LG+G
Sbjct: 753 DYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHG 812

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              +  +  PK+++ L    V  +A G  H + I +
Sbjct: 813 --TEDHARHPKQIEALSSKKVKDIAIGSLHCMAITE 846



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 95/202 (47%), Gaps = 19/202 (9%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRSHT 122
           C S + VA+   G  Y+WG+   G+LGHG    +  P ++     ++I     G+G + T
Sbjct: 678 CGSSYSVALTSNGEVYSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHRIVDVACGSGDAQT 737

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEG 181
           + VT+ G   ++G   +G+LG G       P  +  L+  +V    CG  F++ L+  + 
Sbjct: 738 LAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQFSMALT--KS 795

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            ++   G     +LGHGT++                  P+ I AL+ + +  +A G+ H 
Sbjct: 796 GAVYTWGKGDNYRLGHGTEDHAR--------------HPKQIEALSSKKVKDIAIGSLHC 841

Query: 242 VAVDSKGYVYTWGFGGYGRLGH 263
           +A+   G +Y WG    G+LG+
Sbjct: 842 MAITEDGELYGWGRNEQGQLGN 863



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 66/134 (49%), Gaps = 4/134 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  +  L+G D+  V   C +   +A+   G  YTWG+ +  +LGHG +     P  + 
Sbjct: 767 TPKVIEKLMGQDV--VRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIE 824

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            LS  K+K    G  H + +TEDG    +G N+ GQLG+ SI N  EP+ +  +    + 
Sbjct: 825 ALSSKKVKDIAIGSLHCMAITEDGELYGWGRNEQGQLGNPSISNFTEPTLIGGMEGKNII 884

Query: 165 ATACGADFTV-WLS 177
             ACG   T  W S
Sbjct: 885 GVACGPTQTFAWTS 898



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 85/205 (41%), Gaps = 17/205 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            +P  L+   G  I  VA G      +AV   G  Y+WG  + G+LG G       P ++
Sbjct: 712 TTPMLLKFFKGHRIVDVACGSGDAQTLAVTDSGAVYSWGDGDYGKLGRGGNDGCKTPKVI 771

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
            +L    + +   G   ++ +T+ G    +G   + +LG G+  +   P  +  L S +V
Sbjct: 772 EKLMGQDVVRVYCGNQFSMALTKSGAVYTWGKGDNYRLGHGTEDHARHPKQIEALSSKKV 831

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A G+   + ++  E   +   G  + GQLG+ + + +                P  I
Sbjct: 832 KDIAIGSLHCMAIT--EDGELYGWGRNEQGQLGNPSISNFT--------------EPTLI 875

Query: 224 AALAGETIVKVACGTNHTVAVDSKG 248
             + G+ I+ VACG   T A  S G
Sbjct: 876 GGMEGKNIIGVACGPTQTFAWTSGG 900


>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 3660

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 126/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 2863 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 2922

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G    +G  ++G+LG     ++++P  V  L    V 
Sbjct: 2923 SLRGIEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2982

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   E  ++ + G   YG+LG G  +                  P  + 
Sbjct: 2983 DVACGSGDAQTLCLTEDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKVD 3028

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            AL G   VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3029 ALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3088

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 3089 ----AIATGSLHCVCCTEDGEVYTWG 3110



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 25/312 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+  +G+ 
Sbjct: 1846 GKVYACGEATNGRLGL--GVSSGTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKV 1903

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  +   D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 1904 FSWGEGDDGKLGHFSRXNCDKPRLIEALKSRRIRDIACGSSHSAALTSSGELYTWGLGEY 1963

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ LV   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 1964 GRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2023

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2024 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2069

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG      + 
Sbjct: 2070 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWGDNDHGQQG 2125

Query: 315  NGDDWMYPKPLM 326
            NG   +  KP +
Sbjct: 2126 NGTTTVNRKPTL 2137



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 165/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  ++   VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 1808 GGLKGSKIKVPSFSETLSALNAVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGVSS 1865

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  V+ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 1866 GTVPVPRQVTALSSYVVKKVAVHSGGRHATALTADGKVFSWGEGDDGKLGHFSRXNCDKP 1925

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L S  +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 1926 RLIEALKSRRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 1972

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +V+VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 1973 ---TQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2029

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            VP+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2030 VPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2085

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 2086 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 2143

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 2144 QKITRVACGSSHSV 2157



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 2788 GTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADGKLYATGY 2847

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 2848 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 2905

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 2906 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTW 2951

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 2952 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTEDDTVWSWGDGD 3009

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G     ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3010 YGKLGRGGSDGCKVPMKVDALTGLGAVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3068

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3069 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 3096



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 155/363 (42%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            IR  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS     + 
Sbjct: 1779 IRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNAVQV 1832

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 1833 AGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVAVHSGGR 1892

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
                L++     + + G    G+LGH +    +              +PR I AL    I
Sbjct: 1893 HATALTA--DGKVFSWGEGDDGKLGHFSRXNCD--------------KPRLIEALKSRRI 1936

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 1937 RDIACGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQ----VA 1992

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 1993 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQGVCQIECGAQFS 2052

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 2053 LALTKSGVVWTWGKGDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDA 2110

Query: 403  TNV 405
              V
Sbjct: 2111 GQV 2113



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 147/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 2835 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2894

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++  G      G
Sbjct: 2895 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGGLYTWGKG 2954

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V VACG+    T+ +  
Sbjct: 2955 --RYGRLGHS--------DS------EDQLKPKLVEALQGHRVVDVACGSGDAQTLCLTE 2998

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP +VD       +     +  GS  S      G +
Sbjct: 2999 DDTVWSWGDGDYGKLGRGGSDGCKVPMKVDALTGLGAVK----VECGSQFSVALTKSGAV 3054

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 3055 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 3114

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 3115 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3150



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 122/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +   A   G + T++  + +G  +  
Sbjct: 2786 GSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVTADG-KLYA 2844

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 2845 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 2890

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 2891 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 2946

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHF-VGADSSCIS 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+     +  D +  S
Sbjct: 2947 GLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVVDVACGSGDAQTLCLTEDDTVWS 3004

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P KVD L G+  + V CG   S+ + 
Sbjct: 3005 WGDGDYGKLGRG--GSDGCKVPMKVDALTGLGAVKVECGSQFSVALT 3049



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 1921 NCDKPRLIEALKSRRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 1978

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 1979 MVKVLVGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLN 2038

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                 V 
Sbjct: 2039 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2096

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 2097 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 2156

Query: 242  VA 243
            VA
Sbjct: 2157 VA 2158



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 74/163 (45%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+    V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3015 RGGSDGCKV-PMKVDALTGLGA--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 3071

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 3072 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 3131

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
              L   +V   ACG+  T+  S+ + AS   L A +P +Y  L
Sbjct: 3132 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYSHL 3174



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2077 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 2134

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 2135 PTLVQGLEGQKITRVACGSSHSVAWT 2160



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  I K A G      + +K  V+ WG     +LG  +     VP   +     N +
Sbjct: 1773 ASGGSLIRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNAV 1830

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 1831 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVA 1886

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   + AD    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 1887 VHSGGRHATALTADGKVFSWGEGDDGKLGH--FSRXNCDKPRLIEALKSRRIRDIACGSS 1944

Query: 395  HSLVIV 400
            HS  + 
Sbjct: 1945 HSAALT 1950



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G VY WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 2781 TLSAGGSGTVYGWGHNHRGQLGGVEGAKVKVPTPCEALA---ALRPAQLIGGEQTLFAVT 2837

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 2838 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2896

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 2897 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2943


>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
 gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
 gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
 gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
 gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 165/359 (45%), Gaps = 35/359 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--ELSKYKIKKA 115
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT++S  + +   I   
Sbjct: 24  VVLVSAG--ASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81

Query: 116 GAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
             G  HT   +ED   + ++GW   G+LG G+  +   P PV+ L   ++   ACG    
Sbjct: 82  ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             L+      + + G  Q GQLG GT     T+DS +         P+ I +  G  +  
Sbjct: 142 --LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQSFEGVCVKM 185

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +A G  HT AV   G +Y WG+G YG LG  ++ D  VP +V   +   ++    +I+ G
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEKMV----LIACG 241

Query: 294 SVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
             ++   +  G LY +G  K     +GD  D + P  L  L   ++  +  G  H   + 
Sbjct: 242 WRHTITVSSSGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSSISQISGGWRHTMALT 301

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +D     WG  ++G++G G         P +V   E   V  VACG+ H+L   ++ NV
Sbjct: 302 SDGKLYGWGWNKFGQVGVGD--TDDHCFPVQVKFPEDQKVAQVACGWRHTLAFTEKKNV 358



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 131/283 (46%), Gaps = 23/283 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 160

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 161 LGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 220

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  E +   ACG   T+ +SS    S+   G  +YGQLGHG          
Sbjct: 221 RLVPEKVSSVEGEKMVLIACGWRHTITVSS--SGSLYTYGWSKYGQLGHGD--------- 269

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   +I +++ G  HT+A+ S G +Y WG+  +G++G  +  D
Sbjct: 270 -----FEDHLVPHKLEALKDSSISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDTDD 324

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              P +V   +   V    A ++ G  ++        ++ WG+
Sbjct: 325 HCFPVQVKFPEDQKV----AQVACGWRHTLAFTEKKNVFSWGR 363



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           D +     C   H +A   +   ++WGR   GQLGHG+ + R++P ++  LS
Sbjct: 336 DQKVAQVACGWRHTLAFTEKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALS 387



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 56/128 (43%), Gaps = 14/128 (10%)

Query: 285 PPEAVI--SAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPL--MDLSGWNLR 334
           PP AV+  SAG+ +S     G  L  WG+ ++      + +D + P  L   D +   + 
Sbjct: 20  PPPAVVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGIT 79

Query: 335 CMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
            +  G  H   +   +    SWG   +G LG+G         P+ V  L+G+ +  +ACG
Sbjct: 80  SVICGADHTTAYSEDEQQVYSWGWGDFGRLGHG--NSSDVFTPQPVKALQGIKIKQIACG 137

Query: 393 YGHSLVIV 400
             H L + 
Sbjct: 138 DSHCLAVT 145


>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 341

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 155/330 (46%), Gaps = 31/330 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           +TWGR E GQLG GD   +D PT V  L    +++   G  HTVV+T DG    +G    
Sbjct: 3   FTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQIACGSGHTVVLTTDGEVFTWGRGDD 62

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G    +  P   + L  + V    CG+  T  ++      +   G   YG+LGHG
Sbjct: 63  GRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTG--NGDLYTWGGGMYGKLGHG 120

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
            +  + T              P+ + AL G T+ ++ACG+ HT  V + G +YTWG    
Sbjct: 121 DEAGHAT--------------PKRVEALVGATVAQIACGSRHTAIVTASGALYTWGDKEN 166

Query: 259 GRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKL 312
           G  GH E +  +++PR ++      V    A ISA   +++     G+L+ W     G+L
Sbjct: 167 GVAGHGETEGHQYLPRLLESMAAKRV----AQISACGFHTAIVTDAGELFTWGEGKFGRL 222

Query: 313 KNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
            +  +   +   ++D + G   R +  G  H   V  D    ++G  ++G+LG+     K
Sbjct: 223 GHMSERNCHSPTIVDYMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNK 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P  V+ L+GM V  + CG+ HS+ + 
Sbjct: 283 MT--PTFVEALDGMFVSQITCGWSHSVALT 310



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 156/341 (45%), Gaps = 31/341 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT +  L GV ++ +A  C S H V +  +G  +TWGR + G+LGHGD   +  P +   
Sbjct: 24  PTYVDALRGVGVQQIA--CGSGHTVVLTTDGEVFTWGRGDDGRLGHGDNGWKYVPRMTQS 81

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L+   + +   G  HT  VT +G+   +G   +G+LG G       P  V  LV + V  
Sbjct: 82  LAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHATPKRVEALVGATVAQ 141

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  T  +++    ++   G  + G  GHG    +             Q  PR + +
Sbjct: 142 IACGSRHTAIVTA--SGALYTWGDKENGVAGHGETEGH-------------QYLPRLLES 186

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           +A + + +++    HT  V   G ++TWG G +GRLGH  +++   P  VD      V  
Sbjct: 187 MAAKRVAQISACGFHTAIVTDAGELFTWGEGKFGRLGHMSERNCHSPTIVDYM----VGK 242

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSG 339
               +S G  +++  +  G+LY +G  +      N+  + M P  +  L G  +  +  G
Sbjct: 243 KPRQVSCGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALDGMFVSQITCG 302

Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             H         + +WG+  +G+LG+G    +  A+P+ V+
Sbjct: 303 WSHSVALTVKGLVYTWGNGDHGKLGHGN--GRKVAVPQAVE 341



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 2/115 (1%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  SPT +  +VG   R V+  C   H   V  +GR YT+G  E GQLGH D++ +  PT
Sbjct: 229 NCHSPTIVDYMVGKKPRQVS--CGGFHTAVVSEDGRLYTFGGGEHGQLGHNDRVNKMTPT 286

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
            V  L    + +   G SH+V +T  G    +G   HG+LG G+ R    P  V 
Sbjct: 287 FVEALDGMFVSQITCGWSHSVALTVKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V+TWG G  G+LG  +  D+  P  VD  +   V      I+ GS ++      G+++ W
Sbjct: 2   VFTWGRGEDGQLGLGDTSDQDEPTYVDALRGVGVQQ----IACGSGHTVVLTTDGEVFTW 57

Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
                G+L +  + W Y P+    L+G  +  +  G+ H   V  +    +WG   YG+L
Sbjct: 58  GRGDDGRLGHGDNGWKYVPRMTQSLAGQIVLQVTCGSYHTAAVTGNGDLYTWGGGMYGKL 117

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+G   +   A PK+V+ L G  V  +ACG  H+ ++ 
Sbjct: 118 GHGD--EAGHATPKRVEALVGATVAQIACGSRHTAIVT 153


>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
          Length = 1871

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 128/266 (48%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  + G+LGHG++   DRP ++ 
Sbjct: 1064 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIE 1123

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 1124 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVI 1183

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 1184 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 1229

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 1230 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 1289

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 1290 ----AIATGSLHCVCCTEDGEVYTWG 1311



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 141/312 (45%), Gaps = 25/312 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 47  GKVYSCGEATNGRLGL--GMSSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 104

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 105 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 164

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 165 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 224

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 225 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 270

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
            RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG      + 
Sbjct: 271 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWGDNDHGQQG 326

Query: 315 NGDDWMYPKPLM 326
           NG   +  KP +
Sbjct: 327 NGTTTVNRKPTL 338



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38  GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
           G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y+ G    G+LG G   
Sbjct: 9   GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYSCGEATNGRLGLGMSS 66

Query: 96  IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 67  GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 126

Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
             +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 127 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 173

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
               Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 174 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 230

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
           +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 231 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 286

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
           +  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 287 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGT--TTVNRKPTLVQGLEG 344

Query: 384 MHVISVACGYGHSL 397
             +  VACG  HS+
Sbjct: 345 QKITRVACGSSHSV 358



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 989  GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 1048

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 1049 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAKDG 1106

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 1107 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 1152

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ W    
Sbjct: 1153 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 1210

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 1211 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 1269

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 1270 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 1297



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 93/338 (27%), Positives = 148/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 1036 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 1095

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  K G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 1096 EVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 1153

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 1154 KGRYGRLGH--------SDS------EDQLKPKLVEALQGHRVIDIACGSGDAQTLCLTD 1199

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 1200 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 1255

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 1256 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 1315

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 1316 GQLGDGT--TNAIQRPRLVAALQGKKVNRVACGSAHTL 1351



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 987  GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 1046

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 1047 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 1091

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 1092 SSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 1147

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 1148 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGH--RVIDIACGSGDAQTLCLTDDDTVWS 1205

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 1206 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 1250



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 122 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 179

Query: 103 IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 180 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 239

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
            + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 240 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 297

Query: 205 ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                       DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 298 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 357

Query: 242 VA 243
           VA
Sbjct: 358 VA 359



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 7/163 (4%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 1216 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 1272

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 1273 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 1332

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASI--LNAGLP-QYGQL 195
              L   +V   ACG+  T+  S+ + AS   L A +P +Y  L
Sbjct: 1333 AALQGKKVNRVACGSAHTLAWSTSKPASAGKLPAQVPMEYNHL 1375



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 85/196 (43%), Gaps = 22/196 (11%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           P     L+   +V+VA G+    AV  +G VY+ G    GRLG         +PR++   
Sbjct: 19  PSFSETLSALNVVQVAGGSKSLFAVTVEGKVYSCGEATNGRLGLGMSSGTVPIPRQITAL 78

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY----------PKPLMDL 328
             + V+   AV S G   ++ T   G+++ WG+    GDD             P+ +  L
Sbjct: 79  S-SYVVKKVAVHSGGRHATALTV-DGKVFSWGE----GDDGKLGHFSRMNCDKPRLIEAL 132

Query: 329 SGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +R +  G+ H      S    +WG  +YG LG+G     +   PK V +L G  VI
Sbjct: 133 KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLGHG--DNTTQLKPKMVKVLLGHRVI 190

Query: 388 SVACGY--GHSLVIVD 401
            VACG     +L + D
Sbjct: 191 QVACGSRDAQTLALTD 206



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 278 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 335

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT 126
           PT+V  L   KI +   G SH+V  T
Sbjct: 336 PTLVQGLEGQKITRVACGSSHSVAWT 361



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 982  TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 1038

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 1039 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 1097

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 1098 YSWGEAKDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 1144


>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
            rotundata]
          Length = 4755

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 138/285 (48%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + AVGR       +++ PT L  +  V ++ VA      HC+A+  EG  Y+WG  +
Sbjct: 3952 ATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4011

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+++  DRP ++ EL   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4012 DGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4071

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4072 SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4131

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  ++KV CG+  +VA+   G +YTWG G Y RLGH  
Sbjct: 4132 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGT 4177

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++    +  G+++ WG
Sbjct: 4178 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4218



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 156/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P +   LS  +  +   G      VT DG   A
Sbjct: 3893 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3952

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 3953 TGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4010

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            +L+Y+   RP+ I  L G  IV VACG +H+ A+ S G++
Sbjct: 4011 DDGKLGHGN-----------RLSYD---RPKLIEELLGTEIVDVACGGHHSAAITSAGWL 4056

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W 
Sbjct: 4057 YTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4114

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  I +WG   Y  LG
Sbjct: 4115 DGDYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQFSVALTRSGSIYTWGKGDYHRLG 4174

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4175 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4214



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 148/340 (43%), Gaps = 38/340 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     VV+++G   A G  
Sbjct: 2912 YVWGLNDKDQLGGLKGSKIKL--PVYSESLSKLKPVHIAGGSKTLFVVSQEGKLYACGEG 2969

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP P+  L   V +  A   G    + L+  +   + + G  + G+
Sbjct: 2970 TNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALT--QDGRVFSWGEGEDGK 3027

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG  +  +              +PR I +L  + I  VACG+ H+ A+ S G +YTWG
Sbjct: 3028 LGHGNCSSLD--------------KPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWG 3073

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +Y W   
Sbjct: 3074 LGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQ----VACGSRDAQTMALTADGSVYSWGDG 3129

Query: 310  --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              GKL   G D  Y   L+D L+G  +  ++ G            + +WG   Y  LG+G
Sbjct: 3130 DFGKLGRGGSDGCYTPLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3189

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                     P  V+ L G  VI VA G  H L + D   V
Sbjct: 3190 --NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQV 3227



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 149/341 (43%), Gaps = 34/341 (9%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     DGN   P  +  L    I+ VA      H +A+  +GR 
Sbjct: 2961 GKLYACGE---GTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRV 3017

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+    D+P ++  L   +I+    G  H+  +T  G    +G  ++
Sbjct: 3018 FSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITSSGELYTWGLGEY 3077

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +++P  V+ LV + V   ACG+     ++     S+ + G   +G+LG  
Sbjct: 3078 GRLGHGDTNTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3137

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  +  L G  +V++ CG   ++A+   G V+TWG G 
Sbjct: 3138 GSDGCYT---------------PLLVDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGD 3182

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
            Y RLGH        P  V+  +   V+     ++ G+++       GQ+Y WG      +
Sbjct: 3183 YFRLGHGNDHHVRKPTLVEGLRGKKVIH----VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3238

Query: 314  NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             NG   +  KP +      +  +D   ++      S  I+W
Sbjct: 3239 GNGSTIVNKKPSL------VHELDDARVNRVSCGSSHSIAW 3273



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 161/344 (46%), Gaps = 36/344 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P  +  LS+Y IKK    +G  H + +T+DG 
Sbjct: 2957 VSQEGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGR 3016

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 3017 VFSWGEGEDGKLGHGNCSSLDKPRLIESLKSKRIRDVACGSGHSAAITS--SGELYTWGL 3074

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG  N               Q +P+ + +L G+ +++VACG+    T+A+ + 
Sbjct: 3075 GEYGRLGHGDTN--------------TQLKPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3120

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG       + P  VD      V+     I  G+  S      G+++
Sbjct: 3121 GSVYSWGDGDFGKLGRGGSDGCYTPLLVDRLNGLGVVQ----IECGAQFSLALTKYGEVW 3176

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    KP +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 3177 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDTGQVYAWGDNDHG 3236

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDR 402
            + G G      +  P  V  L+   V  V+CG  HS+  V+ D+
Sbjct: 3237 QQGNG--STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3278



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G +I  V   C   H  A+   G  YTWG+   G+LGHGD   +  P +V  
Sbjct: 4026 PKLIEELLGTEI--VDVACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA 4083

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4084 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4143

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     SI   G   Y +LGHGTD+                 RPR +
Sbjct: 4144 IKVECGSQFSVALT--RSGSIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4187

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4188 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLVHALQ 4243



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 152/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    +KK    +G  H + ++ +G
Sbjct: 3943 AVTADGKVYATGYGAVGRLGIGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4002

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+  +   P  +  L+ +E+   ACG   +  ++S     +   G
Sbjct: 4003 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITS--AGWLYTWG 4060

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q  P+ + AL    ++ VACG+    T+ V  
Sbjct: 4061 KGRYGRLGHG--------DS------EDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTD 4106

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP +++      V+     +  GS  S      G +
Sbjct: 4107 DDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGVIK----VECGSQFSVALTRSGSI 4162

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H    +D     +WG    
Sbjct: 4163 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4222

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4223 GQLGDGTTC--ALQRPRLVHALQGKKITRVACGSAHTL 4258



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 107/244 (43%), Gaps = 19/244 (7%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +   Y+WG  + G+LGHGD+   + P ++  L    I     G +++  ++ +
Sbjct: 517 HYLALTEDSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDKNITFIACGSTYSAALSSN 576

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
           G    +G   +G+LG G+  + + P+ V  L    +   ACG+  +  L       + + 
Sbjct: 577 GELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHMIVYVACGSGDSQTLCVTASGIVFSW 636

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   YG+LG G  N   T              P+ +  L    + KV CG   + A+ + 
Sbjct: 637 GDGDYGKLGRGGCNGSKT--------------PKIVDKLLDINVAKVYCGGQFSAALTAY 682

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VYTWG G   RLGH  ++    P+ ++  +   V      +  GS++         +Y
Sbjct: 683 GEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKV----KELCVGSLHVLALTEDQLVY 738

Query: 308 MWGK 311
            WG+
Sbjct: 739 GWGR 742



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 102/218 (46%), Gaps = 21/218 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  LV  +I F+A  C S +  A+   G  YTWGR   G+LGHG+      PT+VS 
Sbjct: 549 PKLIESLVDKNITFIA--CGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSA 606

Query: 107 LSKYKI--KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           L+ + I     G+G S T+ VT  G   ++G   +G+LG G       P  V  L+   V
Sbjct: 607 LNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINV 666

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG  F+  L++     +   G  +  +LGHG  NE + +             P+AI
Sbjct: 667 AKVYCGGQFSAALTAY--GEVYTWGKGEAYRLGHG--NEEHVR------------YPKAI 710

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
            AL  + + ++  G+ H +A+     VY WG   YG++
Sbjct: 711 EALKTKKVKELCVGSLHVLALTEDQLVYGWGRNDYGQI 748



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 65/248 (26%), Positives = 104/248 (41%), Gaps = 29/248 (11%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   A   D   +L+  E +S+ + G    G+LGHG    Y                P+ 
Sbjct: 506 VAMIASHPDGKHYLALTEDSSVYSWGNGDGGRLGHGDRTWYE--------------EPKL 551

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           I +L  + I  +ACG+ ++ A+ S G +YTWG G YGRLGH    D  VP  V     + 
Sbjct: 552 IESLVDKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLVSALNGHM 611

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNG-DDWMYPK---PLMDLSGWNL 333
           ++       +G   + C    G ++ W     GKL   G +    PK    L+D++   +
Sbjct: 612 IV--YVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAKV 669

Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            C   G     + A     +WG  +   LG+G   ++    PK ++ L+   V  +  G 
Sbjct: 670 YC--GGQFSAALTAYGEVYTWGKGEAYRLGHG--NEEHVRYPKAIEALKTKKVKELCVGS 725

Query: 394 GHSLVIVD 401
            H L + +
Sbjct: 726 LHVLALTE 733



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4123 RGGSDGCKV-PMKIESLAGLGV--IKVECGSQFSVALTRSGSIYTWGKGDYHRLGHGTDD 4179

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G+      P  V
Sbjct: 4180 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTCALQRPRLV 4239

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGA 182
              L   ++T  ACG+  T+  S+++  
Sbjct: 4240 HALQGKKITRVACGSAHTLAWSTMKAT 4266



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 31/253 (12%)

Query: 5   EAEKMVEEETGKEKGGELLFCGSTCWDAV--------------GRRKGALDGNLVSPTRL 50
           E  K++E     +K    + CGST   A+              GR       +++ PT +
Sbjct: 547 EEPKLIESLV--DKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDDVMVPTLV 604

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
             L G  I +VA G      + V   G  ++WG  + G+LG G       P IV +L   
Sbjct: 605 SALNGHMIVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDI 664

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
            + K   G   +  +T  G    +G  +  +LG G+  +   P  +  L ++     C  
Sbjct: 665 NVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEEHVRYPKAIEALKTKKVKELCVG 724

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
              V L+  E   +   G   YGQ+    D    T  S           P     L+G+ 
Sbjct: 725 SLHV-LALTEDQLVYGWGRNDYGQI----DPALGTIVS----------EPTLCPTLSGKN 769

Query: 231 IVKVACGTNHTVA 243
           ++ + CG   + A
Sbjct: 770 VIGLVCGPTQSFA 782



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 22/210 (10%)

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
            TD E NTKD      ++ +   + +  L            + T++ D  G +Y WG    
Sbjct: 3854 TDGEGNTKDHENHQLFKQEHDEQLLQWLNRRP-------EDWTLSWDGSGAIYGWGHNHR 3906

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLK 313
            G+LG  E     +P   +     + L P   ++ G          G++Y       G+L 
Sbjct: 3907 GQLGGLEGAKVKLPVLCESL---SALRP-VQLTGGEQTLFAVTADGKVYATGYGAVGRLG 3962

Query: 314  NNG-DDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
              G D  M P  L  +    ++   ++SG  H   + ++    SWG    G+LG+G   +
Sbjct: 3963 IGGTDSVMMPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHG--NR 4020

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             S   PK ++ L G  ++ VACG  HS  I
Sbjct: 4021 LSYDRPKLIEELLGTEIVDVACGGHHSAAI 4050


>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
 gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
          Length = 4947

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 156/358 (43%), Gaps = 66/358 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            ++ +PT +  L  V I+ VA      HC+A+  +G  ++WG  E G+LGHG++   DRP 
Sbjct: 4161 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPK 4220

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            ++  LS   +     G +H+  +T  G+ L +G  ++G+LG G   ++++P  V  L+  
Sbjct: 4221 LIESLSGIGVVDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEALLGY 4280

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
                 ACG+     L   +  ++ + G   YG+LG G  +                  P 
Sbjct: 4281 RAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PM 4326

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I +LAG  + KV CG+  +VA+   G VYTWG G Y RLGH        P++V   Q  
Sbjct: 4327 KIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGK 4386

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
             ++     I+ GS++    +  G+++ WG    + D+                       
Sbjct: 4387 KIIS----IATGSLHCVACSDAGEVFTWG----DNDE----------------------- 4415

Query: 342  HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                              G+LG G     +   P+ V  L+G H++ V CG  H+L +
Sbjct: 4416 ------------------GQLGDGTVS--AIQRPRLVQSLQGKHIVKVICGSAHTLAL 4453



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 146/332 (43%), Gaps = 30/332 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            + WG N RGQLG  D  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 4092 FGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 4151

Query: 140  GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+ V  L   + +  A   G    + LSS     + + G  + G+LG
Sbjct: 4152 GRLGVGGTDSVTTPTLVESLQHVMIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4209

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG  + Y+              RP+ I +L+G  +V +ACG+ H+  +  +G+V TWG G
Sbjct: 4210 HGNRDSYD--------------RPKLIESLSGIGVVDIACGSAHSACITIQGHVLTWGKG 4255

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GK 311
             YGRLGH + +D+  P+ V+       +  +    +G   + C      ++ W     GK
Sbjct: 4256 RYGRLGHGDSEDQLQPKLVEALLGYRAI--DIACGSGDAQTLCITDDDNVWSWGDGDYGK 4313

Query: 312  LKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQ 369
            L   G D    P  +  L+G  +  ++ G+        S S  +WG   Y  LG+G    
Sbjct: 4314 LGRGGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NT 4371

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                 PKKV  L+G  +IS+A G  H +   D
Sbjct: 4372 DHVRRPKKVAALQGKKIISIATGSLHCVACSD 4403



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G+L  CG       GR     + N+ +P ++  L    ++ VA      H +A+ ++G
Sbjct: 3078 QDGKLYACGE---GTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDG 3134

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  E G+LGHG+++  ++P ++  L   +I+    G SH+  +T  G    +G  
Sbjct: 3135 KVFSWGEGEDGKLGHGNRLTLEKPKLIETLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3194

Query: 138  KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    +++P  V  L    V   ACG+     L   E   + + G   +G+LG
Sbjct: 3195 EYGRLGHGDNCTQLKPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLG 3254

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  +  L G  ++++ CG   ++A+   G V+TWG G
Sbjct: 3255 RG--------------GSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKG 3300

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             Y RLGH   +    P  +   +   V+     ++ G+++       GQ+Y WG
Sbjct: 3301 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVYAWG 3350



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 97/344 (28%), Positives = 151/344 (43%), Gaps = 34/344 (9%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +V  +   WG N++ QLG   G K++   PT  S LS+ K      G     +V++DG  
Sbjct: 3025 EVSSKVLVWGLNDKEQLGGLKGSKVK--LPTYSSVLSQLKPIHIAGGSKSLFIVSQDGKL 3082

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  V  L   V +  A   G    + L +++G  + + G
Sbjct: 3083 YACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMAL-TLDG-KVFSWG 3140

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG            +L  E   +P+ I  L  + I  +ACG++H+ A+ S G
Sbjct: 3141 EGEDGKLGHGN-----------RLTLE---KPKLIETLRTKRIRDIACGSSHSAAITSSG 3186

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             +YTWG G YGRLGH +   +  P+ V   Q + V+  +    +    + C    G ++ 
Sbjct: 3187 ELYTWGLGEYGRLGHGDNCTQLKPKLVTALQDHRVV--QVACGSRDAQTLCLTEDGLVFS 3244

Query: 309  W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G +    P  +  L+G  +  ++ G         +  + +WG   Y  
Sbjct: 3245 WGDGDFGKLGRGGSEGCSIPHQVDRLNGVGVMQIECGAQFSLALTKAGEVWTWGKGDYYR 3304

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G    +    P  +  L G  VI VA G  H L + D   V
Sbjct: 3305 LGHG--TDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQV 3346



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 172/375 (45%), Gaps = 41/375 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR--NERGQLGHGD 94
            G L G+ V  PT    L  +    +A G  S   V+ D  G+ Y  G   N R  LGH +
Sbjct: 3042 GGLKGSKVKLPTYSSVLSQLKPIHIAGGSKSLFIVSQD--GKLYACGEGTNGRLGLGHNN 3099

Query: 95   KIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
             +    P  V  LS+Y +KK    +G  H + +T DG   ++G  + G+LG G+     +
Sbjct: 3100 NV--PTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEK 3157

Query: 153  PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P  +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG        D+  +
Sbjct: 3158 PKLIETLRTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHG--------DNCTQ 3207

Query: 212  LAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
            L      +P+ + AL    +V+VACG+    T+ +   G V++WG G +G+LG    +  
Sbjct: 3208 L------KPKLVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGC 3261

Query: 270  WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PK 323
             +P +VD      V+     I  G+  S      G+++ WGK     L +  D  +  P 
Sbjct: 3262 SIPHQVDRLNGVGVMQ----IECGAQFSLALTKAGEVWTWGKGDYYRLGHGTDQHVRKPT 3317

Query: 324  PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            P+  L G  +  +  G +H     DS  + +WG   +G+ G G      +  P  V  L+
Sbjct: 3318 PIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSG--NTIVNKKPSLVLGLD 3375

Query: 383  GMHVISVACGYGHSL 397
            G+ V  VACG  HS+
Sbjct: 3376 GIFVNRVACGSSHSV 3390



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 111/252 (44%), Gaps = 19/252 (7%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +AA C   H +A+   G  Y+WG  + G+LGHGD   ++ PT ++ L+  ++     G S
Sbjct: 612 LAAHCEGRHVLALASSGDVYSWGSGDGGRLGHGDTSAKELPTRIAALADRQVTGVFCGSS 671

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSV 179
           ++  +T  G    +G   +G+LG G+  ++  P+ V  L    V   A G      L   
Sbjct: 672 YSAAITASGELYTWGRGTYGRLGHGNSEDKYVPTLVTALKAHRVVHVALGCGDAHSLCVT 731

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           E       G   +G+LG    NE     S           P  +       +VKV  G+ 
Sbjct: 732 EAGLAFAWGDGDFGKLG----NESCVGTSV----------PVQVDLPQASCVVKVFSGSQ 777

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
            +VA+  +G VYTWG G  GRLGH   +   VP+ V   +   ++     ++ G  +   
Sbjct: 778 FSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQALEGKKIVD----LAVGLAHCLA 833

Query: 300 TAGGGQLYMWGK 311
               G+LY WG+
Sbjct: 834 LTASGELYGWGR 845



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 98/215 (45%), Gaps = 25/215 (11%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG        D+S      A+  P  IAALA   +  V CG++++ A+ + G +YT
Sbjct: 639 GRLGHG--------DTS------AKELPTRIAALADRQVTGVFCGSSYSAAITASGELYT 684

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
           WG G YGRLGH   +D++VP  V   + + V+     +  G  +S C    G  + WG  
Sbjct: 685 WGRGTYGRLGHGNSEDKYVPTLVTALKAHRVV--HVALGCGDAHSLCVTEAGLAFAWGDG 742

Query: 311 ---KLKNNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
              KL N           +DL   +  ++          +  + +  +WG    G LG+G
Sbjct: 743 DFGKLGNESCVGTSVPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHG 802

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               + S +PK V  LEG  ++ +A G  H L + 
Sbjct: 803 --NSEHSPVPKMVQALEGKKIVDLAVGLAHCLALT 835



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 99/241 (41%), Gaps = 45/241 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+ +  V   C S H   + ++G   TWG+   G+LGHGD   + +P +V  
Sbjct: 4219 PKLIESLSGIGV--VDIACGSAHSACITIQGHVLTWGKGRYGRLGHGDSEDQLQPKLVEA 4276

Query: 107  LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  Y+      G+G + T+ +T+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4277 LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESLAGLGV 4336

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL----------- 212
            T   CG+ F+V L+     S+   G   Y +LGHG  +          L           
Sbjct: 4337 TKVECGSQFSVALT--RSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATG 4394

Query: 213  ---------------------------AYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
                                          A  RPR + +L G+ IVKV CG+ HT+A+ 
Sbjct: 4395 SLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLVQSLQGKHIVKVICGSAHTLALS 4454

Query: 246  S 246
            +
Sbjct: 4455 T 4455



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 53/246 (21%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
             L  P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3154 TLEKPKLIETLRTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK 3211

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
            +V+ L  +++ +   G   + T+ +TEDG   ++G    G+LG G     SI ++++   
Sbjct: 3212 LVTALQDHRVVQVACGSRDAQTLCLTEDGLVFSWGDGDFGKLGRGGSEGCSIPHQVD--- 3268

Query: 156  VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------- 204
             R     V    CGA F++ L+  +   +   G   Y +LGHGTD               
Sbjct: 3269 -RLNGVGVMQIECGAQFSLALT--KAGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3325

Query: 205  --------------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACG 237
                            DS    A+                 +P  +  L G  + +VACG
Sbjct: 3326 KVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTIVNKKPSLVLGLDGIFVNRVACG 3385

Query: 238  TNHTVA 243
            ++H+VA
Sbjct: 3386 SSHSVA 3391



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 4/145 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG+  
Sbjct: 4316 RGGSDGCKV-PMKIESLAGLGVTKVE--CGSQFSVALTRSGSVYTWGKGDYHRLGHGNTD 4372

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G++     P  V
Sbjct: 4373 HVRRPKKVAALQGKKIISIATGSLHCVACSDAGEVFTWGDNDEGQLGDGTVSAIQRPRLV 4432

Query: 157  RCLV-SEVTATACGADFTVWLSSVE 180
            + L    +    CG+  T+ LS+ +
Sbjct: 4433 QSLQGKHIVKVICGSAHTLALSTYQ 4457



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 54  VGVDIRFVAAGCV------SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           V V +    A CV      S   VA+  EG  YTWG+   G+LGHG+      P +V  L
Sbjct: 757 VPVQVDLPQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQAL 816

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPV 156
              KI     G +H + +T  G    +G N   Q+    + R+ I  +P+
Sbjct: 817 EGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQICPECVTRDPIITAPI 866



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 48/113 (42%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT +  L    +  VA GC   H + V   G  + WG  + G+LG+   +    P  V  
Sbjct: 704 PTLVTALKAHRVVHVALGCGDAHSLCVTEAGLAFAWGDGDFGKLGNESCVGTSVPVQVDL 763

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                + K  +G   +V +T +G    +G    G+LG G+  +   P  V+ L
Sbjct: 764 PQASCVVKVFSGSQFSVALTREGTVYTWGKGHGGRLGHGNSEHSPVPKMVQAL 816


>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
          Length = 786

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 128/265 (48%), Gaps = 19/265 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT L  +  V I+ VA      HC+A+  EG  Y+WG  + G+LGHG+K+  DRP ++ +
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
           L   +I     G  H+  +T  G    +G  ++G+LG G   +++ P  V  L   +V  
Sbjct: 63  LLGVEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVID 122

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+     L   +  ++ + G   YG+LG G  +                  P  I +
Sbjct: 123 VACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PLKIDS 168

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           LAG  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   ++ 
Sbjct: 169 LAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIIS 228

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
               I+ GS++    +  G+++ WG
Sbjct: 229 ----IATGSLHCVACSDKGEVFTWG 249



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 117/248 (47%), Gaps = 24/248 (9%)

Query: 42  GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           GN VS   P  +  L+GV+I  V   C   H  A+   G  YTWG+   G+LGHGD   +
Sbjct: 49  GNKVSYDRPKLIEDLLGVEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQ 106

Query: 99  DRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            RP +V  L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +
Sbjct: 107 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 166

Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
             L    V    CG+ F+V L+     ++   G   Y +LGHGTD+              
Sbjct: 167 DSLAGLGVVKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR----------- 213

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
              RPR +AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V
Sbjct: 214 ---RPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 270

Query: 276 DVFQRNNV 283
              Q   +
Sbjct: 271 HALQGKKI 278



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/311 (27%), Positives = 142/311 (45%), Gaps = 38/311 (12%)

Query: 101 PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           PT++  +    IKK    +G  H + ++ +G+  ++G    G+LG G+  +   P  +  
Sbjct: 3   PTLLESIQHVFIKKVAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIED 62

Query: 159 LVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L+  E+   ACG   +  ++S     +   G  +YG+LGHG  ++              Q
Sbjct: 63  LLGVEIVDIACGGHHSAAITS--AGWLYTWGKGRYGRLGHGDSDD--------------Q 106

Query: 218 PRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            RP+ + AL    ++ VACG+    T+ V     V++WG G YG+LG        VP ++
Sbjct: 107 LRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKI 166

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLS 329
           D      V+     +  GS  S      G +Y WGK     L +  DD +  P+ +  L 
Sbjct: 167 DSLAGLGVVK----VECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDDHVRRPRKVAALQ 222

Query: 330 GWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM--PKKVDILEGMHV 386
           G  +  + +G++H    +D     +WG    G+LG G     +SA+  P+ V  L+G  +
Sbjct: 223 GKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDG----TTSALHRPRLVHALQGKKI 278

Query: 387 ISVACGYGHSL 397
             VACG  H+L
Sbjct: 279 TRVACGSAHTL 289



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 25/220 (11%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG    Y+              RP+ I  L G  IV +ACG +H+ A+ S G++YT
Sbjct: 44  GKLGHGNKVSYD--------------RPKLIEDLLGVEIVDIACGGHHSAAITSAGWLYT 89

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
           WG G YGRLGH +  D+  P+ V+  Q   V+  +    +G   + C      ++ WG  
Sbjct: 90  WGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWGDG 147

Query: 311 ---KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              KL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G
Sbjct: 148 DYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKGDYHRLGHG 207

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                    P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 208 --TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 245



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 86/178 (48%), Gaps = 17/178 (9%)

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-I 290
           V V+ G  H +A+ S+G+VY+WG G  G+LGH  +     P+ ++     ++L  E V I
Sbjct: 17  VAVSSGGKHCIALSSEGHVYSWGEGDDGKLGHGNKVSYDRPKLIE-----DLLGVEIVDI 71

Query: 291 SAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPK---PLMDLSGWNLRCMDSGNM 341
           + G  +S+     G LY WGK +       + DD + PK    L D    ++ C      
Sbjct: 72  ACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVIDVACGSGDAQ 131

Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              V  D +  SWG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ +
Sbjct: 132 TLCVTDDDNVWSWGDGDYGKLGRG--GSDGCKVPLKIDSLAGLGVVKVECGSQFSVAL 187



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 71/156 (45%), Gaps = 5/156 (3%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 154 RGGSDGCKV-PLKIDSLAGLGV--VKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 210

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G+      P  V
Sbjct: 211 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 270

Query: 157 RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLP 190
             L   ++T  ACG+  T+ W ++    S + A  P
Sbjct: 271 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASTP 306


>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
            HERC2-like [Bombus terrestris]
          Length = 5151

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P +   LS  +  +   G    + VT DG   A
Sbjct: 4289 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4348

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 4349 TGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4406

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            +L Y+   RP+ I  L G  IV +ACG +H+ A+ S G++
Sbjct: 4407 DDGKLGHGN-----------RLMYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4452

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W 
Sbjct: 4453 YTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4510

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  I +WG   Y  LG
Sbjct: 4511 DGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4570

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4571 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4610



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + A GR       +++ PT L  +  V ++ VA      HC+A+  EG  Y+WG  +
Sbjct: 4348 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4407

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+++  DRP ++ EL   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4408 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4467

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4468 SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4527

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  ++KV CG+  +VA+   G +YTWG G Y RLGH  
Sbjct: 4528 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4573

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++       G+++ WG
Sbjct: 4574 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4614



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 150/341 (43%), Gaps = 34/341 (9%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ +A      H +A+  +G+ 
Sbjct: 3311 GKLYACGE---GTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGKI 3367

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ +  D+P ++  L   +I+    G  H+  +T  G    +G  ++
Sbjct: 3368 FSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3427

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +++P  V+ LV + V   ACG+     ++     S+ + G   +G+LG  
Sbjct: 3428 GRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3487

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  I  L G  +V++ CG   ++A+   G V+TWG G 
Sbjct: 3488 GSDGCYT---------------PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGD 3532

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
            Y RLGH        P  V+  +   V+     ++ G+++       GQ+Y WG      +
Sbjct: 3533 YFRLGHGNDHHVRKPTLVEGLRGKKVVH----VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3588

Query: 314  NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             NG   +  KP +      +  +D   ++      S  I+W
Sbjct: 3589 GNGSTIVNKKPSL------VHELDDARVNRVSCGSSHSIAW 3623



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 36/344 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P ++  LS+Y IKK    +G  H + +T+DG 
Sbjct: 3307 VSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALTQDGK 3366

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 3367 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTWGL 3424

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG        D++ ++      +P+ + +L G+ +++VACG+    T+A+ + 
Sbjct: 3425 GEYGRLGHG--------DTATQM------KPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3470

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG       + P  +D      V+     I  G+  S      G+++
Sbjct: 3471 GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGEVW 3526

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    KP +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 3527 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG 3586

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDR 402
            + G G      +  P  V  L+   V  V+CG  HS+  V+ D+
Sbjct: 3587 QQGNG--STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3628



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G +I  V   C   H  A+   G  YTWG+   G+LGHGD   +  P +V  
Sbjct: 4422 PKLIEELLGTEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA 4479

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4480 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4539

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     +I   G   Y +LGHGTD+                 RPR +
Sbjct: 4540 IKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4583

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4584 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4639



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 149/340 (43%), Gaps = 38/340 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     VV+++G   A G  
Sbjct: 3262 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 3319

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP  +  L   + +  A   G    + L+  +   I + G  + G+
Sbjct: 3320 TNGRLGLGDDSNVCEPKLIPFLSQYMIKKMAVHSGGKHALALT--QDGKIFSWGEGEDGK 3377

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG         +SV L      +PR I +L  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 3378 LGHG---------NSVSLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3423

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +Y W   
Sbjct: 3424 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQ----VACGSRDAQTMALTADGSVYSWGDG 3479

Query: 310  --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              GKL   G D  Y   L+D L+G  +  ++ G            + +WG   Y  LG+G
Sbjct: 3480 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3539

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                     P  V+ L G  V+ VA G  H L + D   V
Sbjct: 3540 --NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3577



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
            +AV  +G+ Y  G    G+LG G       PT++  +    +KK    +G  H + ++ +
Sbjct: 4338 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4397

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
            G+  ++G    G+LG G+      P  +  L+ +E+   ACG   +  ++S     +   
Sbjct: 4398 GHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTW 4455

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
            G  +YG+LGHG        DS      E Q  P+ + AL    ++ VACG+    T+ V 
Sbjct: 4456 GKGRYGRLGHG--------DS------EDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4501

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
                V++WG G YG+LG        +P +++      V+  E     GS  S      G 
Sbjct: 4502 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE----CGSQFSVALTRSGA 4557

Query: 306  LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
            +Y WGK     L +  DD +  P+ +  L G  +  + +G++H     D     +WG   
Sbjct: 4558 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDND 4617

Query: 359  YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
             G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4618 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4654



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 105/238 (44%), Gaps = 15/238 (6%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       +  +A+     H +A+  +   Y+WG  + G+LGHGD++  D P +V  
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA 553

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    I     G +++ V++ +G    +G   +G+LG G+  N + P+ V  L    V  
Sbjct: 554 LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVH 613

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G                +    P+ +  
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--------------GCDGSKTPKIVDK 659

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           L    + KV CG   + A+ + G VYTWG G   RLGH  ++    P+ ++V     V
Sbjct: 660 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKV 717



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 21/186 (11%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRV 275
           P+ +   + + +  +A  ++  H +A+     VY+WG G  GRLGH  R   DE  P+ V
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDE--PKLV 551

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLS 329
           +     N+      I+ GS  S+  +  G+LY WG+         N D+ + P  +  L+
Sbjct: 552 EALVDKNI----TFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALN 607

Query: 330 GW---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           G    ++ C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V
Sbjct: 608 GHMVVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--GCDGSKTPKIVDKLLDINV 665

Query: 387 ISVACG 392
             V CG
Sbjct: 666 AKVYCG 671



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4519 RGGSDGCKI-PMKIESLAGLGV--IKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4575

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  T+ G    +G N  GQLG G+      P  V
Sbjct: 4576 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4635

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGA 182
              L   ++T  ACG+  T+  S+++  
Sbjct: 4636 HALQGKKITRVACGSAHTLAWSTMKAT 4662



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 91/242 (37%), Gaps = 31/242 (12%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGAL---------------DGNLVSPTRLRPLVGVDIRFV 61
           +K    + CGST + AV    G L                 N++ PT +  L G  +  V
Sbjct: 556 DKNITFIACGST-YSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVHV 614

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           A G      + V   G  ++WG    G+LG G       P IV +L    + K   G   
Sbjct: 615 ACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQF 674

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           +  +T  G    +G  +  +LG G+  +   P  +  L ++     C  +F V L+  E 
Sbjct: 675 SAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLXTKKVKELCVGNFHV-LALTED 733

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +   G   YGQ+    D    T            P P     L+G+ I+ +ACG   +
Sbjct: 734 QLVYGWGRNDYGQI----DPALGT----------VVPEPTLCPTLSGKNIIGLACGLTQS 779

Query: 242 VA 243
            A
Sbjct: 780 FA 781



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 84/227 (37%), Gaps = 67/227 (29%)

Query: 241  TVAVDSKGYVYTW----------------------------------------------- 253
            T++ D  G +Y W                                               
Sbjct: 4285 TLSWDGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADG 4344

Query: 254  -----GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
                 G+G  GRLG        VP  ++  Q  +V   +  +++G  +    +  G +Y 
Sbjct: 4345 KVYATGYGAAGRLGIGGTDSVMVPTLLESIQ--HVFVKKVAVNSGGKHCLALSSEGHVYS 4402

Query: 309  WGKLKN----NGDDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYG 360
            WG+  +    +G+  MY  PK + +L G  +  +  G  HH     S+    +WG  +YG
Sbjct: 4403 WGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGG-HHSAAITSAGWLYTWGKGRYG 4461

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG--HSLVIVDRTNV 405
             LG+G    +    PK V+ L+   VI VACG G   +L + D  NV
Sbjct: 4462 RLGHG--DSEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNV 4506


>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
          Length = 5118

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/342 (30%), Positives = 156/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P +   LS  +  +   G    + VT DG   A
Sbjct: 4256 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYA 4315

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 4316 TGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4373

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            +L Y+   RP+ I  L G  IV +ACG +H+ A+ S G++
Sbjct: 4374 DDGKLGHGN-----------RLMYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4419

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W 
Sbjct: 4420 YTWGKGRYGRLGHGDSEDQLTPKLVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4477

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  I +WG   Y  LG
Sbjct: 4478 DGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4537

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4538 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4577



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 136/285 (47%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + A GR       +++ PT L  +  V ++ VA      HC+A+  EG  Y+WG  +
Sbjct: 4315 ATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4374

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+++  DRP ++ EL   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4375 DGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4434

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4435 SEDQLTPKLVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4494

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  ++KV CG+  +VA+   G +YTWG G Y RLGH  
Sbjct: 4495 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4540

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++       G+++ WG
Sbjct: 4541 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4581



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 34/341 (9%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ VA      H +A+  +G+ 
Sbjct: 3306 GKLYACGE---GTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGKI 3362

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ +  D+P ++  L   +I+    G  H+  +T  G    +G  ++
Sbjct: 3363 FSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3422

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +++P  V+ LV + V   ACG+     ++     S+ + G   +G+LG  
Sbjct: 3423 GRLGHGDTATQMKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWGDGDFGKLGRG 3482

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  I  L G  +V++ CG   ++A+   G V+TWG G 
Sbjct: 3483 GSDGCYT---------------PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGD 3527

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
            Y RLGH        P  V+  +   V+     ++ G+++       GQ+Y WG      +
Sbjct: 3528 YFRLGHGNDHHVRKPTLVEGLRGKKVVH----VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3583

Query: 314  NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             NG   +  KP +      +  +D   ++      S  I+W
Sbjct: 3584 GNGSTIVNKKPSL------VHELDDARVNRVSCGSSHSIAW 3618



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 165/344 (47%), Gaps = 36/344 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P ++  LS+Y IKK    +G  H + +T+DG 
Sbjct: 3302 VSQEGKLYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALTQDGK 3361

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 3362 IFSWGEGEDGKLGHGNSVSLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTWGL 3419

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG        D++ ++      +P+ + +L G+ +++VACG+    T+A+ + 
Sbjct: 3420 GEYGRLGHG--------DTATQM------KPKLVQSLVGQRVIQVACGSRDAQTMALTAD 3465

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG       + P  +D      V+     I  G+  S      G+++
Sbjct: 3466 GSVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGEVW 3521

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    KP +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 3522 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQVYAWGDNDHG 3581

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDR 402
            + G G      +  P  V  L+   V  V+CG  HS+  V+ D+
Sbjct: 3582 QQGNG--STIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQ 3623



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G +I  V   C   H  A+   G  YTWG+   G+LGHGD   +  P +V  
Sbjct: 4389 PKLIEELLGTEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLVEA 4446

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4447 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4506

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     +I   G   Y +LGHGTD+                 RPR +
Sbjct: 4507 IKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4550

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4551 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4606



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 103/340 (30%), Positives = 149/340 (43%), Gaps = 38/340 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     VV+++G   A G  
Sbjct: 3257 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPIHIAGGSKTLFVVSQEGKLYACGEG 3314

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP  +  L   + +  A   G    + L+  +   I + G  + G+
Sbjct: 3315 TNGRLGLGDDSNVCEPKLIPFLSQYMIKKVAVHSGGKHALALT--QDGKIFSWGEGEDGK 3372

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG         +SV L      +PR I +L  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 3373 LGHG---------NSVSLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 3418

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +Y W   
Sbjct: 3419 LGEYGRLGHGDTATQMKPKLVQSLVGQRVIQ----VACGSRDAQTMALTADGSVYSWGDG 3474

Query: 310  --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              GKL   G D  Y   L+D L+G  +  ++ G            + +WG   Y  LG+G
Sbjct: 3475 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3534

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                     P  V+ L G  V+ VA G  H L + D   V
Sbjct: 3535 --NDHHVRKPTLVEGLRGKKVVHVAVGALHCLAVTDTGQV 3572



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 154/341 (45%), Gaps = 38/341 (11%)

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
            +AV  +G+ Y  G    G+LG G       PT++  +    +KK    +G  H + ++ +
Sbjct: 4305 LAVTADGKVYATGYGAAGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSE 4364

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
            G+  ++G    G+LG G+      P  +  L+ +E+   ACG   +  ++S     +   
Sbjct: 4365 GHVYSWGEGDDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTW 4422

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
            G  +YG+LGHG        DS      E Q  P+ + AL    ++ VACG+    T+ V 
Sbjct: 4423 GKGRYGRLGHG--------DS------EDQLTPKLVEALQDYKVIDVACGSGDAQTLCVT 4468

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
                V++WG G YG+LG        +P +++      V+  E     GS  S      G 
Sbjct: 4469 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE----CGSQFSVALTRSGA 4524

Query: 306  LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQ 358
            +Y WGK     L +  DD +  P+ +  L G  +  + +G++H     D     +WG   
Sbjct: 4525 IYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDND 4584

Query: 359  YGELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
             G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4585 EGQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4621



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 25/305 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       +  +A+     H +A+  +   Y+WG  + G+LGHGD++  D P +V  
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDEPKLVEA 545

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    I     G +++ V++ +G    +G   +G+LG G+  N + P+ V  L    V  
Sbjct: 546 LVDKNITFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVY 605

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G                +    P+ +  
Sbjct: 606 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--------------GCDGSKTPKIVDK 651

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    + KV CG   + A+ + G VYTWG G   RLGH  ++    P+ ++V +   V  
Sbjct: 652 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKV-- 709

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD----WMYPKPLM--DLSGWNLRCMDSG 339
               +  G+ +         +Y WG+      D     + P+P +   LSG N+  +  G
Sbjct: 710 --KELCVGNFHVLALTEDQLVYGWGRNDYGQIDPALGTIVPEPTLCPTLSGKNIIGLACG 767

Query: 340 NMHHF 344
               F
Sbjct: 768 LTQSF 772



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 84/186 (45%), Gaps = 21/186 (11%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRV 275
           P+ +   + + +  +A  ++  H +A+     VY+WG G  GRLGH  R   DE  P+ V
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALTQDSSVYSWGNGDGGRLGHGDRVWYDE--PKLV 543

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLS 329
           +     N+      I+ GS  S+  +  G+LY WG+         N D+ + P  +  L+
Sbjct: 544 EALVDKNI----TFIACGSTYSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALN 599

Query: 330 GWNL---RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           G  +    C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V
Sbjct: 600 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--GCDGSKTPKIVDKLLDINV 657

Query: 387 ISVACG 392
             V CG
Sbjct: 658 AKVYCG 663



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4486 RGGSDGCKI-PMKIESLAGLGV--IKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4542

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  T+ G    +G N  GQLG G+      P  V
Sbjct: 4543 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4602

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGA 182
              L   ++T  ACG+  T+  S+++  
Sbjct: 4603 HALQGKKITRVACGSAHTLAWSTMKAT 4629



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 91/242 (37%), Gaps = 31/242 (12%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGAL---------------DGNLVSPTRLRPLVGVDIRFV 61
           +K    + CGST + AV    G L                 N++ PT +  L G  + +V
Sbjct: 548 DKNITFIACGST-YSAVLSSNGELYTWGRGNYGRLGHGNSDNVLIPTLVTALNGHMVVYV 606

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           A G      + V   G  ++WG    G+LG G       P IV +L    + K   G   
Sbjct: 607 ACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQF 666

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           +  +T  G    +G  +  +LG G+  +   P  +  L  +     C  +F V L+  E 
Sbjct: 667 SAALTAYGEVYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKKVKELCVGNFHV-LALTED 725

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +   G   YGQ+    D    T            P P     L+G+ I+ +ACG   +
Sbjct: 726 QLVYGWGRNDYGQI----DPALGT----------IVPEPTLCPTLSGKNIIGLACGLTQS 771

Query: 242 VA 243
            A
Sbjct: 772 FA 773



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 98/269 (36%), Gaps = 74/269 (27%)

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW----- 253
            TD E NTKD      ++ +   + +  L            + T++ D  G +Y W     
Sbjct: 4217 TDGEGNTKDHESHELFKQEHDEQLLQWLNRRP-------EDWTLSWDGSGAIYGWGHNHR 4269

Query: 254  -----------------------------------------------GFGGYGRLGHREQ 266
                                                           G+G  GRLG    
Sbjct: 4270 GQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLLAVTADGKVYATGYGAAGRLGIGGT 4329

Query: 267  KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMY- 321
                VP  ++  Q  +V   +  +++G  +    +  G +Y WG+  +    +G+  MY 
Sbjct: 4330 DSVMVPTLLESIQ--HVFVKKVAVNSGGKHCLALSSEGHVYSWGEGDDGKLGHGNRLMYD 4387

Query: 322  -PKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV 378
             PK + +L G  +  +  G  HH     S+    +WG  +YG LG+G    +    PK V
Sbjct: 4388 RPKLIEELLGTEIVDIACGG-HHSAAITSAGWLYTWGKGRYGRLGHG--DSEDQLTPKLV 4444

Query: 379  DILEGMHVISVACGYG--HSLVIVDRTNV 405
            + L+   VI VACG G   +L + D  NV
Sbjct: 4445 EALQDYKVIDVACGSGDAQTLCVTDDDNV 4473


>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
          Length = 4502

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 132/267 (49%), Gaps = 21/267 (7%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P+ L  L  V ++ VA      HC+A+  EG  Y+WG  E G+LGHG+K+  DRP I+  
Sbjct: 3690 PSLLESLQHVFVKKVAVNSGGKHCLALSSEGEVYSWGEGEDGKLGHGNKLPCDRPRIIES 3749

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            L    +     G +H+  +T  G    +G  ++G+LG G   ++++P  V  L+   V  
Sbjct: 3750 LRGKDVVDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEALLGYRVMD 3809

Query: 166  TACGA--DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
             ACG+    T  ++  EG ++ + G   YG+LG G  +                  P  I
Sbjct: 3810 VACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKI--------------PTKI 3855

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             +L+G  I+KV CG+  +VA+ + G VYTWG G Y RLGH   +    P++V   Q   V
Sbjct: 3856 ESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKV 3915

Query: 284  LPPEAVISAGSVNSSCTAGGGQLYMWG 310
            +     IS G+++       G++Y WG
Sbjct: 3916 IS----ISTGALHCVVCTDQGEVYTWG 3938



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 21/270 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N+ SP ++  L    +R VA      H +A+  +GR ++WG  + G+LGHGD    D P 
Sbjct: 2770 NVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFSWGEGDDGKLGHGDVTSLDTPR 2829

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
             +  L+ ++++   AG +H+  VT  G    +G  ++G+LG G    ++ P  V  LV +
Sbjct: 2830 CIEALNGFRVRDVAAGSNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQ 2889

Query: 163  -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             V   +CG+     L+ VEG  + + G   +G+LG G                E    P 
Sbjct: 2890 RVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRG--------------GSEGCSSPC 2935

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
             +  L+G  +  V CG   +VA+   G+VYTWG G Y RLGH  +Q   W P  V+  + 
Sbjct: 2936 LVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRW-PTLVEGLRG 2994

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
              V+     +S G+++       GQ++ WG
Sbjct: 2995 KKVIG----VSVGALHCLAVTDAGQVFAWG 3020



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 108/343 (31%), Positives = 160/343 (46%), Gaps = 36/343 (10%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G+ Y WG N RGQLG  +  +   PT+   LS  +  +   G      +T DG   A G+
Sbjct: 3614 GQIYGWGHNHRGQLGGVEGAKVKVPTVCEALSALRPIQLAGGEQTLFAITSDGRVYATGY 3673

Query: 137  NKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   PS +  L     +  A   G    + LSS EG  + + G  + G
Sbjct: 3674 GAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSS-EG-EVYSWGEGEDG 3731

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG            KL  +   RPR I +L G+ +V VACG  H+ A+ + G +YTW
Sbjct: 3732 KLGHGN-----------KLPCD---RPRIIESLRGKDVVDVACGGAHSAAITALGELYTW 3777

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA----GGGQLYMW 309
            G G YGRLGH +  D+  P+ V+      V+     ++ GS ++   A     GG ++ W
Sbjct: 3778 GKGRYGRLGHGDSDDQLKPKLVEALLGYRVMD----VACGSGDAQTCAITDEEGGTVWSW 3833

Query: 310  -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGEL 362
                 GKL   G D    P  +  LSG  +  ++ G+      +++ S  +WG   Y  L
Sbjct: 3834 GDGDYGKLGRGGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKGDYHRL 3893

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+G    +    PKKV  L+G  VIS++ G  H +V  D+  V
Sbjct: 3894 GHG--VDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEV 3934



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 151/339 (44%), Gaps = 40/339 (11%)

Query: 78   RCYTWGRNERGQLG--HGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            R Y WG N++ QLG   G KI+   P  V   +S   I  AG  +S   +VT+ G + A 
Sbjct: 2699 RVYVWGLNDKEQLGGPKGSKIKV--PQAVDWTVSLQPISVAGGSKS-LFLVTQSGKAYAC 2755

Query: 135  GWNKHGQLGSGSIRNEIEPSPVRCLVSEV---TATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G  RN   P  +  L   V    A   G    + L++     + + G   
Sbjct: 2756 GEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTA--DGRVFSWGEGD 2813

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
             G+LGHG     +T              PR I AL G  +  VA G+NH+ AV S G +Y
Sbjct: 2814 DGKLGHGDVTSLDT--------------PRCIEALNGFRVRDVAAGSNHSAAVTSSGELY 2859

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
            TWG G YGRLGH +   +  P+RV+      V+     +S GS ++   A   GG +Y W
Sbjct: 2860 TWGLGEYGRLGHGDNLTQLTPKRVESLVGQRVVQ----VSCGSRDAQTLALVEGGLVYSW 2915

Query: 310  -----GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
                 GKL   G +      L+D LSG  +  ++ G      +  +    +WG   Y  L
Sbjct: 2916 GDGDFGKLGRGGSEGCSSPCLVDKLSGLGVCHVECGAQFSVALTCNGHVYTWGKGDYFRL 2975

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G+G    +    P  V+ L G  VI V+ G  H L + D
Sbjct: 2976 GHG--SDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTD 3012



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/340 (26%), Positives = 152/340 (44%), Gaps = 40/340 (11%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V   G+ Y  G    G+LG G     + P  ++ LS++ ++K    +G  H + +T DG 
Sbjct: 2746 VTQSGKAYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGR 2805

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----EVTATACGADFTVWLSSVEGASILN 186
              ++G    G+LG G + +   P   RC+ +     V   A G++ +  ++S     +  
Sbjct: 2806 VFSWGEGDDGKLGHGDVTSLDTP---RCIEALNGFRVRDVAAGSNHSAAVTS--SGELYT 2860

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAV 244
             GL +YG+LGHG DN               Q  P+ + +L G+ +V+V+CG+    T+A+
Sbjct: 2861 WGLGEYGRLGHG-DNL-------------TQLTPKRVESLVGQRVVQVSCGSRDAQTLAL 2906

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
               G VY+WG G +G+LG    +    P  VD      V      +  G+  S      G
Sbjct: 2907 VEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKLSGLGV----CHVECGAQFSVALTCNG 2962

Query: 305  QLYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
             +Y WGK     L +  D  + +P  +  L G  +  +  G +H     D+    +WG  
Sbjct: 2963 HVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVFAWGDN 3022

Query: 358  QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
             +G+ G G      +  P  V  ++G+ +  VACG  HS+
Sbjct: 3023 DHGQQGNGSI--TVNRRPTLVQGIDGIKITRVACGSSHSV 3060



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 152/340 (44%), Gaps = 36/340 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            A+  +GR Y  G    G+LG G       P+++  L    +KK    +G  H + ++ +G
Sbjct: 3661 AITSDGRVYATGYGAGGRLGIGGAESVTVPSLLESLQHVFVKKVAVNSGGKHCLALSSEG 3720

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   +V   ACG   +  ++++    +   G
Sbjct: 3721 EVYSWGEGEDGKLGHGNKLPCDRPRIIESLRGKDVVDVACGGAHSAAITAL--GELYTWG 3778

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG  ++              Q +P+ + AL G  ++ VACG+    T A+  
Sbjct: 3779 KGRYGRLGHGDSDD--------------QLKPKLVEALLGYRVMDVACGSGDAQTCAITD 3824

Query: 247  K--GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            +  G V++WG G YG+LG        +P +++      ++     +  GS  S   +  G
Sbjct: 3825 EEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGLGIIK----VECGSQFSVALSNNG 3880

Query: 305  QLYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
             +Y WGK     L +  D+ +  PK +M L G  +  + +G +H  V  D     +WG  
Sbjct: 3881 SVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGDN 3940

Query: 358  QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
              G+LG G         P+ V  L+   +  V+CG  H++
Sbjct: 3941 DEGQLGDG--TTTGIQKPRLVAALQNKKINRVSCGSAHTV 3978



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 97/240 (40%), Gaps = 47/240 (19%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G D+  V   C   H  A+   G  YTWG+   G+LGHGD   + +P +V  
Sbjct: 3744 PRIIESLRGKDV--VDVACGGAHSAAITALGELYTWGKGRYGRLGHGDSDDQLKPKLVEA 3801

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLVSE 162
            L  Y++     G+G + T  +T++     + W    +G+LG G       P+ +  L   
Sbjct: 3802 LLGYRVMDVACGSGDAQTCAITDEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESLSGL 3861

Query: 163  -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA-------- 213
             +    CG+ F+V LS+    S+   G   Y +LGHG D         + L         
Sbjct: 3862 GIIKVECGSQFSVALSN--NGSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISIS 3919

Query: 214  ---------------------YEAQ---------PRPRAIAALAGETIVKVACGTNHTVA 243
                                  E Q          +PR +AAL  + I +V+CG+ HTVA
Sbjct: 3920 TGALHCVVCTDQGEVYTWGDNDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVA 3979



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 99/246 (40%), Gaps = 53/246 (21%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +L +P  +  L G  +R VAAG  S H  AV   G  YTWG  E G+LGHGD + +  P 
Sbjct: 2824 SLDTPRCIEALNGFRVRDVAAG--SNHSAAVTSSGELYTWGLGEYGRLGHGDNLTQLTPK 2881

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
             V  L   ++ +   G   + T+ + E G   ++G    G+LG G       P    CLV
Sbjct: 2882 RVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWGDGDFGKLGRGGSEGCSSP----CLV 2937

Query: 161  SEVTA-----TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------- 204
             +++        CGA F+V L+      +   G   Y +LGHG+D               
Sbjct: 2938 DKLSGLGVCHVECGAQFSVALTC--NGHVYTWGKGDYFRLGHGSDQHVRWPTLVEGLRGK 2995

Query: 205  --------------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACG 237
                            D+    A+                 RP  +  + G  I +VACG
Sbjct: 2996 KVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKITRVACG 3055

Query: 238  TNHTVA 243
            ++H+VA
Sbjct: 3056 SSHSVA 3061



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
            E+GG +   G   +  +GR  G  DG  + PT++  L G+ I  +   C S   VA+   
Sbjct: 3825 EEGGTVWSWGDGDYGKLGR--GGSDGCKI-PTKIESLSGLGI--IKVECGSQFSVALSNN 3879

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  YTWG+ +  +LGHG      RP  V  L   K+     G  H VV T+ G    +G 
Sbjct: 3880 GSVYTWGKGDYHRLGHGVDEHVRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVYTWGD 3939

Query: 137  NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
            N  GQLG G+     +P  V  L + ++   +CG+  TV  S+ +G S   AG
Sbjct: 3940 NDEGQLGDGTTTGIQKPRLVAALQNKKINRVSCGSAHTVAWSTCKGCSTPVAG 3992



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 3/140 (2%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SP  +  L G+ +  V  G  +   VA+   G  YTWG+ +  +LGHG       PT+V 
Sbjct: 2933 SPCLVDKLSGLGVCHVECG--AQFSVALTCNGHVYTWGKGDYFRLGHGSDQHVRWPTLVE 2990

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   K+     G  H + VT+ G   A+G N HGQ G+GSI     P+ V+ +   ++T
Sbjct: 2991 GLRGKKVIGVSVGALHCLAVTDAGQVFAWGDNDHGQQGNGSITVNRRPTLVQGIDGIKIT 3050

Query: 165  ATACGADFTVWLSSVEGASI 184
              ACG+  +V  ++ E  S+
Sbjct: 3051 RVACGSSHSVAWTAPEPPSV 3070


>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC2-like [Xenopus (Silurana) tropicalis]
          Length = 4845

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4040 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4099

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4100 SLRGTEVVDIAAGGAHSACITAAGELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4159

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4160 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4205

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  + KV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 4206 SLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4265

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 4266 ----AIATGSLHCVCCTEDGEVYTWG 4287



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 27/295 (9%)

Query: 25  CGSTCWDAVGRR----KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           C   C+  + R       A + N + P  ++ L   +I  +AA     H +A+      +
Sbjct: 458 CAEKCFLILSRNGKLYTQAYNNNTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELF 517

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA----GAGRSHTVVVTEDGNSLAFGW 136
           +WG  + G+LGHGD +  + P +VS LS  +  K       G +++  +T DG    +G 
Sbjct: 518 SWGCGDGGRLGHGDTVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGR 577

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             +G+LG GS  ++  P  V  L   +V   +CG+     LS  E   + + G   YG+L
Sbjct: 578 GNYGRLGHGSSEDQTVPMLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKL 637

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G  +   T              P+ I  L    IVKV CG+  ++A+   G VY+WG 
Sbjct: 638 GRGGSDGCKT--------------PKLIEKLQDLDIVKVRCGSQFSIAITKDGQVYSWGK 683

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           G   RLGH  ++    P+ ++  Q   V+     ++ GS +       G++Y WG
Sbjct: 684 GDNQRLGHGTEEHVRYPKIMNGLQGKKVVD----VAVGSTHCLALTESGEVYSWG 734



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3965 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4024

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4025 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4082

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V +A G  H+  + + G +YTW
Sbjct: 4083 KLGHGNRSPCD--------------RPRVIESLRGTEVVDIAAGGAHSACITAAGELYTW 4128

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 4129 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4186

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 4187 YGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 4245

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 4246 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 4273



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 17/235 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 3015 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKV 3072

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3132

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TW
Sbjct: 3193 GSEGCNI--------------PQNIERLNGQAVCQIECGAQFSLALTKSGVVWTW 3233



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 161/381 (42%), Gaps = 45/381 (11%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            G L G+ +  P+    L  +++  VA G  S    AV  EG+ Y  G    G+LG G   
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTAEGKVYACGEATNGRLGLGISS 3034

Query: 97   -QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3094

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3141

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3142 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-NGDDWMYPKPLMD-- 327
            +P+ ++      V      I  G+  S      G ++ W   K+     + Y   L++  
Sbjct: 3199 IPQNIERLNGQAV----CQIECGAQFSLALTKSGVVWTWXXTKHCLAVXFYYXNYLLELF 3254

Query: 328  ----------LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
                      L  +   C     ++   +       +WG   +G+ G G      +  P 
Sbjct: 3255 LIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNG--TTTVNRKPT 3312

Query: 377  KVDILEGMHVISVACGYGHSL 397
             V  LEG  +  VACG  HS+
Sbjct: 3313 LVHGLEGQKITRVACGSSHSV 3333



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4012 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4071

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L  +EV   A G   +  +++     +   G
Sbjct: 4072 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVDIAAGGAHSACITA--AGELYTWG 4129

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4130 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4175

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V      +  GS  S      G +
Sbjct: 4176 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGVGV----TKVECGSQFSVALTKSGAV 4231

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H      D    +WG    
Sbjct: 4232 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDE 4291

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4292 GQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4327



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 134/334 (40%), Gaps = 77/334 (23%)

Query: 75   VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
            +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G   
Sbjct: 2961 IRTKVFVWGLNDKDQLGGLKGSKIKV--PSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3018

Query: 133  AFGWNKHGQLGSGSIRNEIEPSPVRC------LVSEVTATACGADFTVWLSSVEGASILN 186
            A G   +G+LG G I +   P P +       +V +V   + G   T    +V+G  + +
Sbjct: 3019 ACGEATNGRLGLG-ISSGTVPIPRQITALSNYVVKKVAVHSGGRHATAL--TVDG-KVFS 3074

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
             G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ S
Sbjct: 3075 WGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAITS 3120

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
             G +YTWG G YGRLGH +   +  P+ V V   + V           +  +C +   Q 
Sbjct: 3121 SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRV-----------IQVACGSRDAQ- 3168

Query: 307  YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
                                      L   D G +           SWG   +G+LG G 
Sbjct: 3169 -------------------------TLALTDEGLV----------FSWGDGDFGKLGRG- 3192

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             G +   +P+ ++ L G  V  + CG   SL + 
Sbjct: 3193 -GSEGCNIPQNIERLNGQAVCQIECGAQFSLALT 3225



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/287 (27%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3963 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADG-KLYA 4021

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4022 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4067

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     I+AG  +S+C    G
Sbjct: 4068 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGTEVVD----IAAGGAHSACITAAG 4123

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
            +LY WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 4124 ELYTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 4181

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V  V CG   S+ + 
Sbjct: 4182 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGVGVTKVECGSQFSVALT 4226



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 121/271 (44%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           N + P  V+ L S  +   A   D   +L+    + + + G    G+LGHG         
Sbjct: 480 NTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSELFSWGCGDGGRLGHG--------- 530

Query: 208 SSVKLAYEAQPRPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ ++AL+G+     ++ +ACG+ ++ A+ + G +YTWG G YGRLGH
Sbjct: 531 DTVSLE-----EPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGH 585

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +D+ VP  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 586 GSSEDQTVPMLVTGLKGLKVV--DVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSD 643

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 644 GCKTPKLIEKLQDLDIVKVRCGSQFSIA--ITKDGQVYSWGKGDNQRLGHG--TEEHVRY 699

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  V+ VA G  H L + +   V
Sbjct: 700 PKIMNGLQGKKVVDVAVGSTHCLALTESGEV 730



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L GV +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4192 RGGSDGCKV-PMKIDSLTGVGVTKVE--CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4248

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4249 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4308

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 4309 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPSQVPMEYN 4349



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 106/257 (41%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGELLF--CGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K+V   +GK+ G +++   CGST   A+              GR       +   P
Sbjct: 535 LEEPKLVSALSGKQTGKQVIHIACGSTYSAAITADGELYTWGRGNYGRLGHGSSEDQTVP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      ++V   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVTGLKGLKVVDVSCGSGDAQTLSVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
               I K   G   ++ +T+DG   ++G   + +LG G+  +   P  +  L   +V   
Sbjct: 655 QDLDIVKVRCGSQFSIAITKDGQVYSWGKGDNQRLGHGTEEHVRYPKIMNGLQGKKVVDV 714

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+   +              L + G++     N+      ++++   A+P P  +  L
Sbjct: 715 AVGSTHCL-------------ALTESGEVYSWGSNDQCQHFDTLRI---AKPVPSVLPGL 758

Query: 227 AGETIVKVACGTNHTVA 243
             + IV ++CG   + A
Sbjct: 759 DSKHIVGISCGPAQSFA 775



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 53   LVGVDIRFVAAGCVSCHC--------VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            L+ V +RFV  G     C        + + +  + Y WG N+ GQ G+G      +PT+V
Sbjct: 3255 LIKVSVRFVLLGQYLXTCATYFKLNIIKIVISKKVYAWGDNDHGQQGNGTTTVNRKPTLV 3314

Query: 105  SELSKYKIKKAGAGRSHTVVVT 126
              L   KI +   G SH+V  T
Sbjct: 3315 HGLEGQKITRVACGSSHSVAWT 3336



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  + K   G   T  + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2942 ASTGSFVRKKTAGLESTATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2999

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 3000 Q----VAGGSKSLFAVTAEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3055

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 3056 VHSGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 395  HSLVIV 400
            HS  I 
Sbjct: 3114 HSAAIT 3119


>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
 gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
          Length = 443

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 164/357 (45%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT++S      I     
Sbjct: 16  VVLVSAG--ASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGITSVIC 73

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +ED   + ++GW   G+LG G+  +   P PV+ L   ++   ACG      
Sbjct: 74  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC-- 131

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG GT     T+DS +         P+ I A  G  +  +A
Sbjct: 132 LAVTMAGQVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFEGVCVKMIA 177

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  +P +V   +   ++    +++ G  
Sbjct: 178 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV----LVACGWR 233

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  L  L    +  +  G  H   + ++
Sbjct: 234 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDSTISQISGGWRHTMALTSE 293

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G      S  P +V   E   +  VACG+ H+L + ++ NV
Sbjct: 294 GKLYGWGWNKFGQVGVGNNDDHCS--PVQVHFPEDQKISQVACGWRHTLALSEKKNV 348



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 119/247 (48%), Gaps = 19/247 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G+  +WGRN+ GQ
Sbjct: 93  WGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA--CGDSHCLAVTMAGQVQSWGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 151 LGLGTTEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 210

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  E +   ACG   T+ +S  +  ++   G  +YGQLGHG          
Sbjct: 211 RLLPEKVSSVEGEKMVLVACGWRHTITVS--DSGNLYTYGWSKYGQLGHGD--------- 259

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   TI +++ G  HT+A+ S+G +Y WG+  +G++G     D
Sbjct: 260 -----FEDHLVPHKLEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 314

Query: 269 EWVPRRV 275
              P +V
Sbjct: 315 HCSPVQV 321



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 12/180 (6%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           +T+V V+ G +H+VA+ +   + +WG G  G+LGH + +D  VP  +  F    +    +
Sbjct: 14  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPGIT---S 70

Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           VI      ++ +    Q+Y W     G+L + N  D   P+P+  L G  ++ +  G+ H
Sbjct: 71  VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH 130

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              V       SWG  Q G+LG G    + S +P+K+   EG+ V  +A G  H+  + +
Sbjct: 131 CLAVTMAGQVQSWGRNQNGQLGLGT--TEDSLLPQKIQAFEGVCVKMIAAGAEHTAAVTE 188



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 20/226 (8%)

Query: 1   MAELEAEKMVEEETG------KEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLV 54
           ++ +E EKMV    G          G L   G + +  +G   G  + +LV P +L  L 
Sbjct: 217 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH--GDFEDHLV-PHKLEALK 273

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
              I  ++ G    H +A+  EG+ Y WG N+ GQ+G G+      P  V      KI +
Sbjct: 274 DSTISQISGGWR--HTMALTSEGKLYGWGWNKFGQVGVGNNDDHCSPVQVHFPEDQKISQ 331

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-------VTATA 167
              G  HT+ ++E  N  ++G    GQLG+G I +   P  +  L ++        ++TA
Sbjct: 332 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSTDGSGCKKLESSTA 391

Query: 168 CGADFTVWLSSVEGASIL-NAGLPQYGQ-LGHGTDNEYNTKDSSVK 211
                 VW+S  E  +I+ +  +P+ G+    G   + N  ++ VK
Sbjct: 392 APFAAKVWVSPSERYAIVPDENVPKAGEGTARGNGADANVPENDVK 437


>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
          Length = 4802

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 137/285 (48%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            ST + A GR       +++ PT L  +  V I+ VA      HC+A+  EG  Y+WG  +
Sbjct: 3999 STGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEGHVYSWGEGD 4058

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+K+  DRP ++ +L   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4059 DGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4118

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4119 SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4178

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  ++KV CG+  +VA+   G VYTWG G Y RLGH  
Sbjct: 4179 --------------PLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4224

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++    +  G+++ WG
Sbjct: 4225 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4265



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 155/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P     LS  +  +   G      VT DG   +
Sbjct: 3940 DGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3999

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A + G    + LSS EG  + + G  
Sbjct: 4000 TGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSS-EG-HVYSWGEG 4057

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            K++Y+   RP+ I  L G  I+ +ACG +H+ A+ S G++
Sbjct: 4058 DDGKLGHGN-----------KMSYD---RPKLIEDLLGVEIIDIACGGHHSAAITSAGWL 4103

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH +  D+  P+ V+  Q   V+  +    +G   + C      ++ W 
Sbjct: 4104 YTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4161

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG
Sbjct: 4162 DGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4221

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4222 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4261



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 113/236 (47%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+GV+I  +A  C   H  A+   G  YTWG+   G+LGHGD   + RP +V  
Sbjct: 4073 PKLIEDLLGVEIIDIA--CGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA 4130

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4131 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4190

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     ++   G   Y +LGHGTD+                 RPR +
Sbjct: 4191 IKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4234

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4235 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLVHALQ 4290



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 161/350 (46%), Gaps = 36/350 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P  +  LS++ IKK    +G  H + +T+DG 
Sbjct: 3009 VSQEGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGK 3068

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 3069 VFSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIAS--NGELYTWGL 3126

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG                  Q RP+ +  L G  +V+VACG+    T+A+ + 
Sbjct: 3127 GEYGRLGHGDT--------------VTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTD 3172

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG       + P  V+      V+  E     G+  S      G+++
Sbjct: 3173 GCVYSWGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVE----CGAQFSLALTKYGEVW 3228

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    KP +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 3229 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHG 3288

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
            + G G         P  V  LE   V  V+CG  HS+  V+VD+ + G +
Sbjct: 3289 QQGNGTTSVNRK--PSLVHELEDARVNRVSCGSSHSIAWVLVDQPSSGNQ 3336



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 130/293 (44%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ VA      H +A+  +G+ 
Sbjct: 3013 GKLYACGE---GTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALTQDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ +  D+P ++  L   +I+    G  H+  +  +G    +G  ++
Sbjct: 3070 FSWGEGEDGKLGHGNNMSLDKPKLIETLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +  P  V+ LV   V   ACG+     ++      + + G   +G+LG  
Sbjct: 3130 GRLGHGDTVTQARPKLVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG 3189

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  +  L G  +V+V CG   ++A+   G V+TWG G 
Sbjct: 3190 GSDGCYT---------------PLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGD 3234

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLGH        P  V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3235 YFRLGHGNDHHVRKPTLVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3283



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 98/344 (28%), Positives = 148/344 (43%), Gaps = 38/344 (11%)

Query: 76   EGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            E   Y WG N++ QLG   G KI+   P     LSK K      G     +V+++G   A
Sbjct: 2960 ESAVYVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYA 3017

Query: 134  FGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G   +G+LG G   N  EP P+  L   V +  A   G    + L+  +   + + G  
Sbjct: 3018 CGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVHSGGKHALALT--QDGKVFSWGEG 3075

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            + G+LGHG +   +              +P+ I  L  + I  +ACG+ H+ A+ S G +
Sbjct: 3076 EDGKLGHGNNMSLD--------------KPKLIETLKSKRIRDIACGSGHSAAIASNGEL 3121

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYM 308
            YTWG G YGRLGH +   +  P+ V     + V+     ++ GS ++   A    G +Y 
Sbjct: 3122 YTWGLGEYGRLGHGDTVTQARPKLVQTLVGHRVVQ----VACGSRDAQTMALTTDGCVYS 3177

Query: 309  W-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G D  Y P  +  L+G  +  ++ G            + +WG   Y  
Sbjct: 3178 WGDGDFGKLGRGGSDGCYTPLVVERLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFR 3237

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G         P  V+ L G  ++ VA G  H L + D   V
Sbjct: 3238 LGHG--NDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3279



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 155/340 (45%), Gaps = 38/340 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y+ G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3990 AVTADGKVYSTGYGAAGRLGIGGTDSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSSEG 4049

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+  +   P  +  L+  E+   ACG   +  ++S     +   G
Sbjct: 4050 HVYSWGEGDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITS--AGWLYTWG 4107

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG  ++              Q RP+ + AL    ++ VACG+    T+ V  
Sbjct: 4108 KGRYGRLGHGDSDD--------------QLRPKVVEALQDYKVIDVACGSGDAQTLCVTD 4153

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+  E     GS  S      G +
Sbjct: 4154 DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVE----CGSQFSVALTRSGAV 4209

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H    +D     +WG    
Sbjct: 4210 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4269

Query: 360  GELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4270 GQLGDG----TTSALHRPRLVHALQGKKITRVACGSAHTL 4305



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 117/266 (43%), Gaps = 19/266 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       +  +A+     H +A+  +G  Y+WG  + G+LGHGD +  D P ++  
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEA 557

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L +  I     G +++  ++  G    +G   +G+LG G+  + + P+ V  L    V  
Sbjct: 558 LLEKNIVFIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGHTVVH 617

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G  +   T              P+ +  
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--------------PKIVDK 663

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    +VKV CG+  + A+ + G VYTWG G   RLGH  ++    P+ ++  +   +  
Sbjct: 664 LLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKI-- 721

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
               +S G+ +         +Y WG+
Sbjct: 722 --KDLSVGATHILVLTEDQFVYGWGR 745



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 101/224 (45%), Gaps = 21/224 (9%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +L  P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD + + RP 
Sbjct: 3087 SLDKPKLIETLKSKRIRDIA--CGSGHSAAIASNGELYTWGLGEYGRLGHGDTVTQARPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T DG   ++G    G+LG G       P  V  L 
Sbjct: 3145 LVQTLVGHRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
               V    CGA F++ L+      +   G   Y +LGHG D+                 +
Sbjct: 3205 GLGVVQVECGAQFSLALTKY--GEVWTWGKGDYFRLGHGNDHHVR--------------K 3248

Query: 220  PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            P  +  L G+ IV VA G  H +AV   G VY WG   +G+ G+
Sbjct: 3249 PTLVEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3292



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+  +I F+A  C S +  A+ V G  YTWGR   G+LGHG+      PT+V+ 
Sbjct: 552 PKLIEALLEKNIVFIA--CGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTT 609

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           L  + +     G+G S T+ VT  G   ++G   +G+LG G       P  V  L+   V
Sbjct: 610 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 669

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG+ F+  L++     +   G     +LGHG++              E    P+ I
Sbjct: 670 VKVFCGSQFSAALTA--HGEVYTWGKGDTYRLGHGSE--------------EHVRYPKII 713

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
            +L  + I  ++ G  H + +    +VY WG   YG++
Sbjct: 714 ESLRDKKIKDLSVGATHILVLTEDQFVYGWGRNDYGQI 751



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/188 (29%), Positives = 86/188 (45%), Gaps = 17/188 (9%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ +   + + +  +A  ++  H +A+   G VY+WG G  GRLGH +      P+ ++ 
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIEA 557

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
               N++     I+ GS  S+  +  G+LY WG+         N DD M P  +  L G 
Sbjct: 558 LLEKNIV----FIACGSTYSAALSVSGELYTWGRGNYGRLGHGNFDDVMIPTLVTTLKGH 613

Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              ++ C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V+ 
Sbjct: 614 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVK 671

Query: 389 VACGYGHS 396
           V CG   S
Sbjct: 672 VFCGSQFS 679



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 5/156 (3%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4170 RGGSDGCKV-PLKIDSLAGLGV--IKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4226

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G+      P  V
Sbjct: 4227 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALHRPRLV 4286

Query: 157  RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLP 190
              L   ++T  ACG+  T+ W ++    S + A  P
Sbjct: 4287 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASTP 4322



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 50/103 (48%), Gaps = 2/103 (1%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           +DI  V   C S    A+   G  YTWG+ +  +LGHG +     P I+  L   KIK  
Sbjct: 665 LDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDKKIKDL 724

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGS--GSIRNEIEPSPV 156
             G +H +V+TED     +G N +GQ+    GS+ +E    P 
Sbjct: 725 SVGATHILVLTEDQFVYGWGRNDYGQIDPTLGSVISEPTLCPT 767



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 59/122 (48%), Gaps = 6/122 (4%)

Query: 59   RFVAAGCVSCHC-----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
            R    G V   C     +A+   G  +TWG+ +  +LGHG+     +PT+V  L   KI 
Sbjct: 3202 RLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIV 3261

Query: 114  KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADF 172
                G  H + VT+ G   A+G N HGQ G+G+     +PS V  L  + V   +CG+  
Sbjct: 3262 HVAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHELEDARVNRVSCGSSH 3321

Query: 173  TV 174
            ++
Sbjct: 3322 SI 3323



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 73/173 (42%), Gaps = 23/173 (13%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----------EAVI 290
            T++ D  G +Y WG    G+LG  E     +P   +     + L P           AV 
Sbjct: 3936 TLSWDGSGAIYGWGHNHRGQLGGLEGPKVKLPAPCESL---SALRPIQLAGGEQTLFAVT 3992

Query: 291  SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGA 347
            + G V S+     G+L + G      D  M P  L  +    ++   + SG  H   + +
Sbjct: 3993 ADGKVYSTGYGAAGRLGIGGT-----DSVMIPTLLESIQHVFIKKVAVSSGGKHCLALSS 4047

Query: 348  DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +    SWG    G+LG+G   + S   PK ++ L G+ +I +ACG  HS  I 
Sbjct: 4048 EGHVYSWGEGDDGKLGHG--NKMSYDRPKLIEDLLGVEIIDIACGGHHSAAIT 4098



 Score = 42.0 bits (97), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 63/154 (40%), Gaps = 3/154 (1%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ PT +  L G  +  VA G      + V   G  ++WG  + G+LG G       P 
Sbjct: 600 DVMIPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK 659

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
           IV +L    + K   G   +  +T  G    +G     +LG GS  +   P  +  L   
Sbjct: 660 IVDKLLDINVVKVFCGSQFSAALTAHGEVYTWGKGDTYRLGHGSEEHVRYPKIIESLRDK 719

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           ++   + GA   + L+  E   +   G   YGQ+
Sbjct: 720 KIKDLSVGATHILVLT--EDQFVYGWGRNDYGQI 751


>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
            HERC2-like [Apis florea]
          Length = 4812

 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/285 (29%), Positives = 137/285 (48%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + AVGR       +++ PT L  +  V ++ VA      HC+A+  EG  Y+WG  +
Sbjct: 4009 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 4068

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+++  DRP ++ EL   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4069 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4128

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  +  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4129 SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4188

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  +VKV CG+  +VA+   G +YTWG G Y RLGH  
Sbjct: 4189 --------------PMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4234

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++       G+++ WG
Sbjct: 4235 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4275



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P +   LS  +  +   G      VT DG   A
Sbjct: 3950 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 4009

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 4010 TGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4067

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            +L+Y+   RP+ I  L G  IV +ACG +H+ A+ S G++
Sbjct: 4068 DDGKLGHGN-----------RLSYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 4113

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH + +D+  P+ ++  Q   V+  +    +G   + C      ++ W 
Sbjct: 4114 YTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4171

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  I +WG   Y  LG
Sbjct: 4172 DGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4231

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4232 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4271



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 150/337 (44%), Gaps = 40/337 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     VV+++G   A G  
Sbjct: 2937 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEG 2994

Query: 138  KHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
             +G+LG G   N  EP P+  L    + +V+  + G      L+  +   + + G  + G
Sbjct: 2995 TNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHA---LALTQDGKVFSWGEGEDG 3051

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG         +S+ L      +PR I +L  + I  +ACG+ H+ A+ S G +YTW
Sbjct: 3052 KLGHG---------NSISLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTW 3097

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW-- 309
            G G YGRLGH +   +  P+ V       ++     I+ GS ++   A    G +Y W  
Sbjct: 3098 GLGEYGRLGHGDTATQSKPKLVQSLVGQRIIQ----IACGSRDAQTMALTADGLVYSWGD 3153

Query: 310  ---GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
               GKL   G D  Y   L+D L+G  +  ++ G            + +WG   Y  LG+
Sbjct: 3154 GDFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGH 3213

Query: 365  GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G         P  V+ L G  VI VA G  H L + D
Sbjct: 3214 G--NDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTD 3248



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G +I  V   C   H  A+   G  YTWG+   G+LGHGD   +  P ++  
Sbjct: 4083 PKLIEELLGTEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA 4140

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4141 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4200

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     +I   G   Y +LGHGTD+                 RPR +
Sbjct: 4201 VKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4244

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4245 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4300



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 36/351 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
             V  EG+ Y  G    G+LG GD      P  +  LS+Y IKK    +G  H + +T+DG
Sbjct: 2981 VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDG 3040

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   G
Sbjct: 3041 KVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTWG 3098

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
            L +YG+LGHG        D++       Q +P+ + +L G+ I+++ACG+    T+A+ +
Sbjct: 3099 LGEYGRLGHG--------DTA------TQSKPKLVQSLVGQRIIQIACGSRDAQTMALTA 3144

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
             G VY+WG G +G+LG       + P  +D      V+     I  G+  S      G++
Sbjct: 3145 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGEV 3200

Query: 307  YMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQY 359
            + WGK       +G+D    KP +   L G  +  +  G +H     D     +WG   +
Sbjct: 3201 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKVIHVAVGALHCLAVTDIGQVYAWGDNDH 3260

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
            G+ G G      +  P  V  L+   V  V+CG  HS+  V+ D+  +  +
Sbjct: 3261 GQQGNG--TTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPTINNQ 3309



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ V+      H +A+  +G+ 
Sbjct: 2986 GKLYACGE---GTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKV 3042

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ I  D+P ++  L   +I+    G  H+  +T  G    +G  ++
Sbjct: 3043 FSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 3102

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    + +P  V+ LV + +   ACG+     ++      + + G   +G+LG  
Sbjct: 3103 GRLGHGDTATQSKPKLVQSLVGQRIIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3162

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  I  L G  +V++ CG   ++A+   G V+TWG G 
Sbjct: 3163 GSDGCYT---------------PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGD 3207

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLGH        P  V+  +   V+     ++ G+++       GQ+Y WG
Sbjct: 3208 YFRLGHGNDHHVRKPTLVEGLRGKKVIH----VAVGALHCLAVTDIGQVYAWG 3256



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 154/340 (45%), Gaps = 38/340 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    +KK    +G  H + ++ +G
Sbjct: 4000 AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 4059

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+  +   P  +  L+ +E+   ACG   +  ++S     +   G
Sbjct: 4060 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTWG 4117

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q  P+ I AL    ++ VACG+    T+ V  
Sbjct: 4118 KGRYGRLGHG--------DS------EDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTD 4163

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        +P +++      V+  E     GS  S      G +
Sbjct: 4164 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVE----CGSQFSVALTRSGAI 4219

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H     D     +WG    
Sbjct: 4220 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDE 4279

Query: 360  GELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4280 GQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4315



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 19/266 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       I  +A+     H +A+  +   Y+WG  + G+LGHGD+   D P ++  
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDEPKLIEA 553

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L +  I     G +++  ++ +G    +G   +G+LG G+  N + P+ V  L    V  
Sbjct: 554 LVEKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVY 613

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G                +    P+ +  
Sbjct: 614 VACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--------------GCDGSKTPKIVDK 659

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    + KV CG   + A+ + G VYTWG G   RLGH  +     P+ +D+ +   V  
Sbjct: 660 LLDINVAKVYCGGQFSAALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKV-- 717

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
               +  G+++         +Y WG+
Sbjct: 718 --KELCVGNLHVLALTEDQLIYGWGR 741



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 21/186 (11%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRV 275
           P+ +   + + I+ +A  ++  H +A+     VY+WG G  GRLGH  R   DE  P+ +
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALTQDNSVYSWGNGDGGRLGHGDRAWYDE--PKLI 551

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLS 329
           +     N+      I+ GS  S+  +  G+LY WG+         N D+ M P  +  L+
Sbjct: 552 EALVEKNI----TFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALN 607

Query: 330 GWNL---RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           G  +    C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V
Sbjct: 608 GHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRG--GCDGSKTPKIVDKLLDINV 665

Query: 387 ISVACG 392
             V CG
Sbjct: 666 AKVYCG 671



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4180 RGGSDGCKI-PMKIESLAGLGV--VKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4236

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  T+ G    +G N  GQLG G+      P  V
Sbjct: 4237 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4296

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGA 182
              L   ++T  ACG+  T+  S+++  
Sbjct: 4297 HALQGKKITRVACGSAHTLAWSTMKAT 4323



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 90/241 (37%), Gaps = 29/241 (12%)

Query: 17  EKGGELLFCGSTCWDAV--------------GRRKGALDGNLVSPTRLRPLVGVDIRFVA 62
           EK    + CGST   A+              GR       N++ PT +  L G  + +VA
Sbjct: 556 EKNITFIACGSTYSAALSSNGELYTWGRGNYGRLGHGNSDNVMIPTLVTALNGHMVVYVA 615

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            G      + V   G  ++WG    G+LG G       P IV +L    + K   G   +
Sbjct: 616 CGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQFS 675

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
             +T  G    +G  +  +LG G+  +   P  +  L ++     C  +  V L+  E  
Sbjct: 676 AALTAYGEVYTWGKGEAYRLGHGNEDHVRYPKIIDILKTKKVKELCVGNLHV-LALTEDQ 734

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            I   G   YGQ+    D    T            P P     L+G+ ++ +ACG   + 
Sbjct: 735 LIYGWGRNDYGQI----DPALGT----------VVPEPTLCPTLSGKNVIGLACGPTQSF 780

Query: 243 A 243
           A
Sbjct: 781 A 781


>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
           [Polysphondylium pallidum PN500]
          Length = 853

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 18/253 (7%)

Query: 35  RRKGALDGNLVSPTRLRPLVGVD-----IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
            + G+  G +V   ++ P++ VD     I+ V       +  AV   G  YTWG NE+GQ
Sbjct: 203 EKSGSKVGEIVDKNQMTPVL-VDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQ 261

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD+     P ++  LS   I     GR H   +++ G+   +G    GQLG G +++
Sbjct: 262 LGLGDRWYHGNPRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKS 321

Query: 150 EIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY--- 203
            + P  V     +   +   A GA+FT+ +S  E   + + G  +YGQLG   D +Y   
Sbjct: 322 LLHPKKVLYFEQQQKKIVQVATGANFTMAVS--ENGELFSFGHGEYGQLGATEDTQYMDW 379

Query: 204 -NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            N  D    L Y     P+ + AL    + KVACG  HT+AV +   VYTWG+G  G LG
Sbjct: 380 NNNGDRDDHLKYSL---PKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLG 436

Query: 263 HREQKDEWVPRRV 275
             ++K + VP+RV
Sbjct: 437 FGDRKFQLVPQRV 449



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/425 (22%), Positives = 172/425 (40%), Gaps = 77/425 (18%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           ++ + + P  ++ L G  I+ +A  C   H +AV   G  Y+WGR + G+LGH  K    
Sbjct: 18  VNKDQLDPAVIQLLKGKRIKQIA--CGEAHSLAVTEFGDVYSWGRGKEGELGHPQKAMTA 75

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPV 156
            P ++  L   +I K   G  H++ +T+ G    +G           ++++   +E + +
Sbjct: 76  PPALIKALEHERIVKVACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGGLVEMTGI 135

Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-- 214
           +   S+V   +     +++L+  + A    +      Q  + T N   T D   +  +  
Sbjct: 136 KSFASKVADHS----LSMYLNGEKAAYDEESASSSVLQ-DNPTANGLVTDDQEEEEEFLP 190

Query: 215 ------EAQPRPRAIAALAGET-------------------IVKVACGTNHTVAVDSKGY 249
                 + + +P    +  GE                    IV ++ G  ++ AV S G 
Sbjct: 191 EAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGN 250

Query: 250 VYTWGFGGYGRLGHREQKDEWV---PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
           VYTWGF   G+LG     D W    PR +      +++     I+ G  + +  +  G L
Sbjct: 251 VYTWGFNEKGQLG---LGDRWYHGNPRVIRSLSNKSIVN----IACGRQHMAAISKSGDL 303

Query: 307 YMW----------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCIS 353
           Y W          GKLK+     ++PK ++       + +      +F   V  +    S
Sbjct: 304 YTWGLGVFGQLGHGKLKS----LLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFS 359

Query: 354 WGHAQYGELGYGPYGQKSS-------------AMPKKVDILEGMHVISVACGYGHSLVIV 400
           +GH +YG+LG     Q                ++PK+V  LE + V  VACG+ H++ + 
Sbjct: 360 FGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVT 419

Query: 401 DRTNV 405
              +V
Sbjct: 420 TDNDV 424



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 26/202 (12%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR I +L+ ++IV +ACG  H  A+   G +YTWG G +G+LGH + K    P++V  F+
Sbjct: 273 PRVIRSLSNKSIVNIACGRQHMAAISKSGDLYTWGLGVFGQLGHGKLKSLLHPKKVLYFE 332

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----------------KLKNNGD-----D 318
           +         ++ G+  +   +  G+L+ +G                   NNGD      
Sbjct: 333 QQQ--KKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLK 390

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           +  PK +  L    +R +  G++H   V  D+   +WG    G LG+G   +K   +P++
Sbjct: 391 YSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFG--DRKFQLVPQR 448

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           V  L G  + SV+ G  H+L++
Sbjct: 449 VPSLSGEEISSVSGGEKHTLIV 470



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 19/125 (15%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
           ++FG  K GQLG    +++++P+ ++ L    +   ACG   +  L+  E   + + G  
Sbjct: 4   ISFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHS--LAVTEFGDVYSWGRG 61

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA-IAALAGETIVKVACGTNHTVAVDSKGY 249
           + G+LGH                 +A   P A I AL  E IVKVACG  H++A+   G 
Sbjct: 62  KEGELGH---------------PQKAMTAPPALIKALEHERIVKVACGNYHSLALTDTGK 106

Query: 250 VYTWG 254
           VY WG
Sbjct: 107 VYQWG 111



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 144/361 (39%), Gaps = 56/361 (15%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           ++G  ++GQLG      +  P ++  L   +IK+   G +H++ VTE G+  ++G  K G
Sbjct: 5   SFGVGKQGQLGLDVNKDQLDPAVIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGKEG 64

Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           +LG         P+ ++ L  E +   ACG   ++ L+           + Q+GQL    
Sbjct: 65  ELGHPQKAMTAPPALIKALEHERIVKVACGNYHSLALTD-------TGKVYQWGQL---- 113

Query: 200 DNEYNTKDSSVK-----------LAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVD-- 245
            +E +   S VK            ++ ++    +++  L GE         + +V  D  
Sbjct: 114 -HEIDATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYLNGEKAAYDEESASSSVLQDNP 172

Query: 246 -SKGYVYTWGFGGYGRL------GHREQKDEWVPRRVDVFQRNNVLPPEAV--------- 289
            + G V          L        +EQ+ E    +V      N + P  V         
Sbjct: 173 TANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGEIVDKNQMTPVLVDFGSKSIKI 232

Query: 290 --ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMY--PKPLMDLSGWNLRCMDSGNM 341
             ISAG   S+     G +Y WG  +      GD W +  P+ +  LS  ++  +  G  
Sbjct: 233 VDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKSIVNIACGRQ 292

Query: 342 HHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH--VISVACGYGHSLV 398
           H    + S    +WG   +G+LG+G    KS   PKKV   E     ++ VA G   ++ 
Sbjct: 293 HMAAISKSGDLYTWGLGVFGQLGHGKL--KSLLHPKKVLYFEQQQKKIVQVATGANFTMA 350

Query: 399 I 399
           +
Sbjct: 351 V 351



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 5/110 (4%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G R   L  +L  P +++ L  V +R VA  C   H +AV  +   YTWG    G 
Sbjct: 379 WNNNGDRDDHLKYSL--PKQVKALESVKVRKVA--CGHLHTIAVTTDNDVYTWGWGSSGC 434

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFGWNK 138
           LG GD+  +  P  V  LS  +I     G  HT++V + D  + AF + +
Sbjct: 435 LGFGDRKFQLVPQRVPSLSGEEISSVSGGEKHTLIVRSSDTTTFAFDYKQ 484



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 15/144 (10%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG----------- 91
           +L+ P ++        + V     +   +AV   G  +++G  E GQLG           
Sbjct: 321 SLLHPKKVLYFEQQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWN 380

Query: 92  ----HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
                 D ++   P  V  L   K++K   G  HT+ VT D +   +GW   G LG G  
Sbjct: 381 NNGDRDDHLKYSLPKQVKALESVKVRKVACGHLHTIAVTTDNDVYTWGWGSSGCLGFGDR 440

Query: 148 RNEIEPSPVRCLVSEVTATACGAD 171
           + ++ P  V  L  E  ++  G +
Sbjct: 441 KFQLVPQRVPSLSGEEISSVSGGE 464


>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
          Length = 4643

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/285 (29%), Positives = 137/285 (48%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + AVGR       +++ PT L  +  V ++ VA      HC+A+  EG  Y+WG  +
Sbjct: 3840 ATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEGHVYSWGEGD 3899

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+++  DRP ++ EL   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 3900 DGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 3959

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  +  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 3960 SEDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKI 4019

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  ++KV CG+  +VA+   G +YTWG G Y RLGH  
Sbjct: 4020 --------------PMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGT 4065

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++       G+++ WG
Sbjct: 4066 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACTDKGEVFTWG 4106



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 156/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P +   LS  +  +   G      VT DG   A
Sbjct: 3781 DGSGAIYGWGHNHRGQLGGLEGAKVKLPVLCESLSALRPVQLTGGEQTLFAVTADGKVYA 3840

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 3841 TGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSS-EG-HVYSWGEG 3898

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            +L+Y+   RP+ I  L G  IV +ACG +H+ A+ S G++
Sbjct: 3899 DDGKLGHGN-----------RLSYD---RPKLIEELLGTEIVDIACGGHHSAAITSAGWL 3944

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH + +D+  P+ ++  Q   V+  +    +G   + C      ++ W 
Sbjct: 3945 YTWGKGRYGRLGHGDSEDQLTPKLIEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4002

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  I +WG   Y  LG
Sbjct: 4003 DGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQFSVALTRSGAIYTWGKGDYHRLG 4062

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4063 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEV 4102



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 149/336 (44%), Gaps = 38/336 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     VV+++G   A G  
Sbjct: 2793 YVWGLNDKDQLGGLKGSKIKL--PVYSEVLSKLKPVHIAGGSKTLFVVSQEGKLYACGEG 2850

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP P+  L   V +  A   G    + L+  +   + + G  + G+
Sbjct: 2851 TNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 2908

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG         +S+ L      +PR I +L  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 2909 LGHG---------NSISLD-----KPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWG 2954

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +   +  P+ V       V+     I+ GS ++   A    G +Y W   
Sbjct: 2955 LGEYGRLGHGDTATQSKPKLVQSLVGQRVIQ----IACGSRDAQTMALTADGLVYSWGDG 3010

Query: 310  --GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              GKL   G D  Y   L+D L+G  +  ++ G            + +WG   Y  LG+G
Sbjct: 3011 DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGDYFRLGHG 3070

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                     P  V+ L G  +I VA G  H L + D
Sbjct: 3071 --NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTD 3104



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 110/236 (46%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G +I  V   C   H  A+   G  YTWG+   G+LGHGD   +  P ++  
Sbjct: 3914 PKLIEELLGTEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSEDQLTPKLIEA 3971

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 3972 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGV 4031

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     +I   G   Y +LGHGTD+                 RPR +
Sbjct: 4032 IKVECGSQFSVALT--RSGAIYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4075

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4076 AALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4131



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 132/293 (45%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ VA      H +A+  +G+ 
Sbjct: 2842 GKLYACGE---GTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKV 2898

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ I  D+P ++  L   +I+    G  H+  +T  G    +G  ++
Sbjct: 2899 FSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGELYTWGLGEY 2958

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    + +P  V+ LV + V   ACG+     ++      + + G   +G+LG  
Sbjct: 2959 GRLGHGDTATQSKPKLVQSLVGQRVIQIACGSRDAQTMALTADGLVYSWGDGDFGKLGRG 3018

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  I  L G  +V++ CG   ++A+   G V+TWG G 
Sbjct: 3019 GSDGCYT---------------PLLIDRLNGLGVVQIECGAQFSLALTKYGEVWTWGKGD 3063

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLGH        P  V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3064 YFRLGHGNDHHVRKPTLVEGLRGKKIIH----VAVGALHCLAVTDIGQVYAWG 3112



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 163/351 (46%), Gaps = 36/351 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
             V  EG+ Y  G    G+LG GD      P  +  LS+Y IKK    +G  H + +T+DG
Sbjct: 2837 VVSQEGKLYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDG 2896

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   G
Sbjct: 2897 KVFSWGEGEDGKLGHGNSISLDKPRLIESLKSKRIRDIACGSGHSAAITS--SGELYTWG 2954

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
            L +YG+LGHG        D++       Q +P+ + +L G+ ++++ACG+    T+A+ +
Sbjct: 2955 LGEYGRLGHG--------DTA------TQSKPKLVQSLVGQRVIQIACGSRDAQTMALTA 3000

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
             G VY+WG G +G+LG       + P  +D      V+     I  G+  S      G++
Sbjct: 3001 DGLVYSWGDGDFGKLGRGGSDGCYTPLLIDRLNGLGVVQ----IECGAQFSLALTKYGEV 3056

Query: 307  YMWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQY 359
            + WGK       +G+D    KP +   L G  +  +  G +H     D     +WG   +
Sbjct: 3057 WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDIGQVYAWGDNDH 3116

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
            G+ G G      +  P  V  L+   V  V+CG  HS+  V+ D+  +  +
Sbjct: 3117 GQQGNG--TTIVNKKPSLVHELDDARVNRVSCGSSHSIAWVLTDQPAINNQ 3165



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 154/340 (45%), Gaps = 38/340 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    +KK    +G  H + ++ +G
Sbjct: 3831 AVTADGKVYATGYGAVGRLGIGGTDSVMVPTLLESIQHVFVKKVAVNSGGKHCLALSSEG 3890

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+  +   P  +  L+ +E+   ACG   +  ++S     +   G
Sbjct: 3891 HVYSWGEGDDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITS--AGWLYTWG 3948

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q  P+ I AL    ++ VACG+    T+ V  
Sbjct: 3949 KGRYGRLGHG--------DS------EDQLTPKLIEALQDYKVIDVACGSGDAQTLCVTD 3994

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        +P +++      V+  E     GS  S      G +
Sbjct: 3995 DDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVIKVE----CGSQFSVALTRSGAI 4050

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H     D     +WG    
Sbjct: 4051 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDE 4110

Query: 360  GELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4111 GQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4146



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 17/229 (7%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           I  +A+     H +A+  +   Y+WG  E G+LGHG+    D P ++  L +  I     
Sbjct: 502 ITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNITFIAC 561

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
           G +++  ++ +G    +G   +G+LG G S ++ + P+ V  L    V   ACG      
Sbjct: 562 GSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGRDPQ 621

Query: 176 LSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
              V  + I+ + G   +G+LG G                +    P+ +  L    + KV
Sbjct: 622 TLCVTASGIVFSWGDGNHGKLGRG--------------GCDGSKTPKIVDKLLDINVAKV 667

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            CG   + A+ + G VYTWG G   +LGH  +     P+ +D+ +   +
Sbjct: 668 YCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKI 716



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 4/147 (2%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4011 RGGSDGCKI-PMKIESLAGLGV--IKVECGSQFSVALTRSGAIYTWGKGDYHRLGHGTDD 4067

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  T+ G    +G N  GQLG G+      P  V
Sbjct: 4068 HVRRPRKVAALQGKKIISIATGSLHCVACTDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4127

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGA 182
              L   ++T  ACG+  T+  S+++  
Sbjct: 4128 HALQGKKITRVACGSAHTLAWSTMKAT 4154



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 75/178 (42%), Gaps = 17/178 (9%)

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
           T++       H +A+     VY+WG G  GRLGH        P+ ++     N+      
Sbjct: 503 TMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEPKLIEALVEKNI----TF 558

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGN-- 340
           I+ GS  S+  +  G+LY WG+         N+  D M P  +  L+G  +  +  G   
Sbjct: 559 IACGSTYSAALSSNGELYTWGRGNYGKLGHGNSDKDVMIPTLVTALNGHMVVYVACGGGR 618

Query: 341 --MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
                 V A     SWG   +G+LG G  G   S  PK VD L  ++V  V CG   S
Sbjct: 619 DPQTLCVTASGIVFSWGDGNHGKLGRG--GCDGSKTPKIVDKLLDINVAKVYCGQQFS 674



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           +DI      C      A+   G  YTWG+ E  +LGHG++     P I+  L   KIK  
Sbjct: 660 LDINVAKVYCGQQFSAALTAYGEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDL 719

Query: 116 GAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACG 169
             G  H + +TED   L +GW  N HGQ+        I P P  C       V   ACG
Sbjct: 720 YIGHLHVLALTED--QLVYGWGRNDHGQIDPA--LGTIVPEPTLCPTFSGKNVIGLACG 774



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 96/241 (39%), Gaps = 49/241 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIV 104
           P  +  LV  +I F+A G  S +  A+   G  YTWGR   G+LGHG+   +D   PT+V
Sbjct: 545 PKLIEALVEKNITFIACG--STYSAALSSNGELYTWGRGNYGKLGHGNS-DKDVMIPTLV 601

Query: 105 SELSKYKIK--KAGAGRS-HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
           + L+ + +     G GR   T+ VT  G   ++G   HG+LG G       P  V  L+ 
Sbjct: 602 TALNGHMVVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLD 661

Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN-------TKDSSVKLA 213
             V    CG  F+  L++     +   G  +  +LGHG ++           K   +K  
Sbjct: 662 INVAKVYCGQQFSAALTAY--GEVYTWGKGEDYKLGHGNEDHVRYPKIIDILKTKKIKDL 719

Query: 214 Y----------EAQ---------------------PRPRAIAALAGETIVKVACGTNHTV 242
           Y          E Q                     P P      +G+ ++ +ACG   + 
Sbjct: 720 YIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFSGKNVIGLACGPTQSF 779

Query: 243 A 243
           A
Sbjct: 780 A 780


>gi|321262146|ref|XP_003195792.1| hypothetical protein CGB_H3360C [Cryptococcus gattii WM276]
 gi|317462266|gb|ADV24005.1| conserved hypothetical protein [Cryptococcus gattii WM276]
          Length = 518

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 181/422 (42%), Gaps = 61/422 (14%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGC 65
           M  E       G +L CG T W   GR++   G +  +L+ P  LR L  V    +  G 
Sbjct: 1   MANESAEGSNWGRVLICGGTDWATNGRKERSSGKVPTDLMEPHILRSLCNVKASKIITGP 60

Query: 66  VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-----KYKIKKAGAGRS 120
            + + + +D+ G  Y +GR       +G  I  + P  +S LS       K     AGRS
Sbjct: 61  SANYAIILDIHGAAYLFGRPPAMVQSNG-VISENIPLKISPLSVGSPEGTKWVNGAAGRS 119

Query: 121 HTVVVTEDGNSLAFGWNKHGQLG-----SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
           H ++V   G+    G N  GQ+G     +     ++    VR   +++     G  F+++
Sbjct: 120 HFLLVDSRGDVWGCGNNIVGQIGLPVATAVDKLTKVAGPWVRDPEAKIVQVTAGHTFSLF 179

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+S     +  +G  ++GQLG+G   E   K  + K+AY+ +  PR +       I+++A
Sbjct: 180 LTST--GQVYASGSSEFGQLGNGKTGERLVK--AGKIAYDIEVPPRLVQGFENVKIIEIA 235

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H++A+D  GYVY+WGF GY RLG ++QKD  +                        
Sbjct: 236 SGNQHSLALDDNGYVYSWGFAGYSRLGLQDQKDRLI------------------------ 271

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV---GADSSCI 352
            S      GQ Y   + K+          + D+    +    SG   HF+     +   +
Sbjct: 272 -SPLAGSTGQPYT--RFKH----------IQDVMACKVIKTSSGGCTHFITTPDPEGGVM 318

Query: 353 SWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
           + G  Q   YGELG G    KS+  P+K+  L G+ +I VA G   +L +    +    L
Sbjct: 319 TVGFGQGVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVAGGAFFTLFLARPNSALSDL 378

Query: 410 DQ 411
           D+
Sbjct: 379 DR 380


>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
          Length = 4791

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 137/285 (48%), Gaps = 19/285 (6%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            ST + A GR       +++ PT L  +  V I+ VA      HC+A+  EG  Y+WG  +
Sbjct: 3988 STGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEGHVYSWGEGD 4047

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG+++  DRP +V +L   +I     G  H+  +T  G    +G  ++G+LG G 
Sbjct: 4048 DGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGD 4107

Query: 147  IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              +++ P  V  L   +V   ACG+     L   +  ++ + G   YG+LG G  +    
Sbjct: 4108 SDDQLRPKVVEALQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKV 4167

Query: 206  KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                          P  I +LAG  ++KV CG+  +VA+   G VYTWG G Y RLGH  
Sbjct: 4168 --------------PLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGT 4213

Query: 266  QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                  PR+V   Q   ++     I+ GS++    +  G+++ WG
Sbjct: 4214 DDHVRRPRKVAALQGKKIIS----IATGSLHCVACSDKGEVFTWG 4254



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 100/342 (29%), Positives = 154/342 (45%), Gaps = 30/342 (8%)

Query: 74   DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
            D  G  Y WG N RGQLG  +  +   P     LS  +  +   G      VT DG   +
Sbjct: 3929 DGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESLSALRPIQLAGGEQTLFAVTADGKVYS 3988

Query: 134  FGWNKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             G+   G+LG G   + + P+    ++ +  +  A   G    + LSS EG  + + G  
Sbjct: 3989 TGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-HVYSWGEG 4046

Query: 191  QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
              G+LGHG            +L+Y+   RP+ +  L G  IV +ACG +H+ A+ S G++
Sbjct: 4047 DDGKLGHGN-----------RLSYD---RPKLVEDLLGIEIVDIACGGHHSAAITSAGWL 4092

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
            YTWG G YGRLGH +  D+  P+ V+  Q   V+  +    +G   + C      ++ W 
Sbjct: 4093 YTWGKGRYGRLGHGDSDDQLRPKVVEALQDYKVI--DVACGSGDAQTLCVTDDDNVWSWG 4150

Query: 310  ----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
                GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG
Sbjct: 4151 DGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQFSVALTRSGAVYTWGKGDYHRLG 4210

Query: 364  YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +G         P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 4211 HG--TDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEV 4250



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 182/386 (47%), Gaps = 39/386 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            G L G+ +  P R   L  +    +A G  +   V+   EG+ Y  G    G+LG GD  
Sbjct: 2965 GGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQ--EGKLYACGEGTNGRLGLGDDY 3022

Query: 97   QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
                P ++  LS+Y IKK    +G  H + +T+DG   ++G  + G+LG G+     +P 
Sbjct: 3023 NMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEGEDGKLGHGNCTTLDKPR 3082

Query: 155  PVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
             +  L S+ +   ACG+  +  ++S     +   GL +YG+LGHG        D++ ++ 
Sbjct: 3083 LIESLKSKRIRDIACGSGHSAAIAS--NGELYTWGLGEYGRLGHG--------DTATQM- 3131

Query: 214  YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
                 +P+ + AL+G+ +V+VACG+    T+++ + G VYTWG G +G+LG       + 
Sbjct: 3132 -----KPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRGGSDGCYT 3186

Query: 272  PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM- 326
            P  VD      V+  E     G+  S      G+++ WGK       +G+D    KP + 
Sbjct: 3187 PLLVDRLNGLGVVQVE----CGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLV 3242

Query: 327  -DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
              L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  L+  
Sbjct: 3243 EGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTIVNRKPSLVHELDDT 3300

Query: 385  HVISVACGYGHSL--VIVDRTNVGER 408
             +  V+CG  HS+  ++VD+   G +
Sbjct: 3301 RMNRVSCGSSHSIAWILVDQPTNGNQ 3326



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 112/236 (47%), Gaps = 21/236 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G++I  V   C   H  A+   G  YTWG+   G+LGHGD   + RP +V  
Sbjct: 4062 PKLVEDLLGIEI--VDIACGGHHSAAITSAGWLYTWGKGRYGRLGHGDSDDQLRPKVVEA 4119

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  YK+     G+G + T+ VT+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 4120 LQDYKVIDVACGSGDAQTLCVTDDDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGV 4179

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F+V L+     ++   G   Y +LGHGTD+                 RPR +
Sbjct: 4180 IKVECGSQFSVALT--RSGAVYTWGKGDYHRLGHGTDDHVR--------------RPRKV 4223

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            AAL G+ I+ +A G+ H VA   KG V+TWG    G+LG         PR V   Q
Sbjct: 4224 AALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLVHALQ 4279



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 34/341 (9%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ VA      H +A+  +G+ 
Sbjct: 3003 GKLYACGE---GTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALTQDGKV 3059

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+    D+P ++  L   +I+    G  H+  +  +G    +G  ++
Sbjct: 3060 FSWGEGEDGKLGHGNCTTLDKPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 3119

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +++P  V+ L  + V   ACG+     +S      +   G   +G+LG  
Sbjct: 3120 GRLGHGDTATQMKPKLVQALSGQRVVQVACGSRDAQTMSLTADGCVYTWGDGDFGKLGRG 3179

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P  +  L G  +V+V CG   ++A+   G V+TWG G 
Sbjct: 3180 GSDGCYT---------------PLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGD 3224

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
            Y RLGH        P  V+  +   ++     ++ G+++       GQ+Y WG      +
Sbjct: 3225 YFRLGHGNDHHVRKPTLVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWGDNDHGQQ 3280

Query: 314  NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
             NG   +  KP +      +  +D   M+      S  I+W
Sbjct: 3281 GNGTTIVNRKPSL------VHELDDTRMNRVSCGSSHSIAW 3315



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 142/338 (42%), Gaps = 34/338 (10%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     +V+++G   A G  
Sbjct: 2954 YVWGLNDKDQLGGLKGSKIK--IPVRSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEG 3011

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP  +  L   V +  A   G    + L+  +   + + G  + G+
Sbjct: 3012 TNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 3069

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG     +              +PR I +L  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 3070 LGHGNCTTLD--------------KPRLIESLKSKRIRDIACGSGHSAAIASNGELYTWG 3115

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----- 309
             G YGRLGH +   +  P+ V       V+  +    +    +      G +Y W     
Sbjct: 3116 LGEYGRLGHGDTATQMKPKLVQALSGQRVV--QVACGSRDAQTMSLTADGCVYTWGDGDF 3173

Query: 310  GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPY 367
            GKL   G D  Y   L+D L+G  +  ++ G            + +WG   Y  LG+G  
Sbjct: 3174 GKLGRGGSDGCYTPLLVDRLNGLGVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG-- 3231

Query: 368  GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                   P  V+ L G  ++ VA G  H L + D   V
Sbjct: 3232 NDHHVRKPTLVEGLRGKKIVHVAVGALHCLAVTDTGQV 3269



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 155/340 (45%), Gaps = 38/340 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y+ G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3979 AVTADGKVYSTGYGAAGRLGIGGTDSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4038

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+  +   P  V  L+  E+   ACG   +  ++S     +   G
Sbjct: 4039 HVYSWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITS--AGWLYTWG 4096

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG  ++              Q RP+ + AL    ++ VACG+    T+ V  
Sbjct: 4097 KGRYGRLGHGDSDD--------------QLRPKVVEALQDYKVIDVACGSGDAQTLCVTD 4142

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+  E     GS  S      G +
Sbjct: 4143 DDNVWSWGDGDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVE----CGSQFSVALTRSGAV 4198

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H    +D     +WG    
Sbjct: 4199 YTWGKGDYHRLGHGTDDHVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDE 4258

Query: 360  GELGYGPYGQKSSAM--PKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +SA+  P+ V  L+G  +  VACG  H+L
Sbjct: 4259 GQLGDG----TTSALQRPRLVHALQGKKITRVACGSAHTL 4294



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 19/266 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       +  +A+     H +A+  +G  Y+WG  + G+LGHGD I  D P ++  
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIET 557

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L +  I     G +++  ++  G    +G   +G+LG GS  +   P+ V  L    V  
Sbjct: 558 LLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMVVH 617

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G  +   T              P+ +  
Sbjct: 618 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKT--------------PKIVDK 663

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    +V+V CG   + A+ ++G VYTWG G   RLGH  ++    P+ ++  +   +  
Sbjct: 664 LLDINVVRVFCGGQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESLRDKKI-- 721

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
               +S G  +         +Y WG+
Sbjct: 722 --KDLSVGGTHILALTEDQFVYGWGR 745



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 21/218 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+  +I F+A  C S +  A+   G  YTWGR   G+LGHG       PT+V+ 
Sbjct: 552 PKLIETLLEKNIIFIA--CGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTT 609

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           L  + +     G+G S T+ VT  G   ++G   +G+LG G       P  V  L+   V
Sbjct: 610 LKGHMVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINV 669

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG  F+  L++     +   G     +LGHG  NE + +             P+ I
Sbjct: 670 VRVFCGGQFSAALTA--RGEVYTWGKGDAYRLGHG--NEEHVR------------YPKLI 713

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
            +L  + I  ++ G  H +A+    +VY WG   YG++
Sbjct: 714 ESLRDKKIKDLSVGGTHILALTEDQFVYGWGRNDYGQI 751



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 89/197 (45%), Gaps = 17/197 (8%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ + + + + +  +A  ++  H +A+   G VY+WG G  GRLGH +      P+ ++ 
Sbjct: 498 PQRMHSFSDKPVTMIASHSDGKHYLALTQDGCVYSWGNGDGGRLGHGDNISHDEPKLIET 557

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
               N++     I+ GS  S+  +  G+LY WG+         + DD   P  +  L G 
Sbjct: 558 LLEKNII----FIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGH 613

Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              ++ C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V+ 
Sbjct: 614 MVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GSDGSKTPKIVDKLLDINVVR 671

Query: 389 VACGYGHSLVIVDRTNV 405
           V CG   S  +  R  V
Sbjct: 672 VFCGGQFSAALTARGEV 688



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 71/156 (45%), Gaps = 5/156 (3%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4159 RGGSDGCKV-PLKIDSLAGLGV--IKVECGSQFSVALTRSGAVYTWGKGDYHRLGHGTDD 4215

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   KI     G  H V  ++ G    +G N  GQLG G+      P  V
Sbjct: 4216 HVRRPRKVAALQGKKIISIATGSLHCVACSDKGEVFTWGDNDEGQLGDGTTSALQRPRLV 4275

Query: 157  RCLV-SEVTATACGADFTV-WLSSVEGASILNAGLP 190
              L   ++T  ACG+  T+ W ++    S + A  P
Sbjct: 4276 HALQGKKITRVACGSAHTLAWSTAKATQSRMPASAP 4311



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/180 (27%), Positives = 78/180 (43%), Gaps = 15/180 (8%)

Query: 229  ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
            E + +       T A   +  VY WG     +LG  +     +P R +V  +   L P  
Sbjct: 2932 EVLQEQVTAQRSTDAPPQQSAVYVWGLNDKDQLGGLKGSKIKIPVRSEVLSK---LKP-I 2987

Query: 289  VISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMY--PKPLMDLSGWNLR--CMDSGN 340
             I+ GS      +  G+LY  G+  N     GDD+    PK +  LS + ++   + SG 
Sbjct: 2988 HIAGGSKTLFIVSQEGKLYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKVAVHSGG 3047

Query: 341  MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             H   +  D    SWG  + G+LG+G     +   P+ ++ L+   +  +ACG GHS  I
Sbjct: 3048 KHALALTQDGKVFSWGEGEDGKLGHG--NCTTLDKPRLIESLKSKRIRDIACGSGHSAAI 3105



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 74/173 (42%), Gaps = 23/173 (13%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----------EAVI 290
            T++ D  G +Y WG    G+LG  E     +P   +     + L P           AV 
Sbjct: 3925 TLSWDGSGAIYGWGHNHRGQLGGLEGAKIKLPAPCESL---SALRPIQLAGGEQTLFAVT 3981

Query: 291  SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGA 347
            + G V S+     G+L + G      D  M P  L  +    ++   ++SG  H   + +
Sbjct: 3982 ADGKVYSTGYGAAGRLGIGGT-----DSVMVPTLLESIQHVFIKKVAVNSGGKHCLALSS 4036

Query: 348  DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +    SWG    G+LG+G   + S   PK V+ L G+ ++ +ACG  HS  I 
Sbjct: 4037 EGHVYSWGEGDDGKLGHG--NRLSYDRPKLVEDLLGIEIVDIACGGHHSAAIT 4087



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 39/161 (24%), Positives = 61/161 (37%), Gaps = 14/161 (8%)

Query: 13  ETGKEKGGELLFCGSTCWDAV--------------GRRKGALDGNLVSPTRLRPLVGVDI 58
           ET  EK    + CGST   A+              GR     + ++  PT +  L G  +
Sbjct: 556 ETLLEKNIIFIACGSTYSAALSASGELYTWGRGNYGRLGHGSNDDVTVPTLVTTLKGHMV 615

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
             VA G      + V   G  ++WG  + G+LG G       P IV +L    + +   G
Sbjct: 616 VHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCG 675

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
              +  +T  G    +G     +LG G+  +   P  +  L
Sbjct: 676 GQFSAALTARGEVYTWGKGDAYRLGHGNEEHVRYPKLIESL 716


>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
 gi|194702882|gb|ACF85525.1| unknown [Zea mays]
 gi|224030327|gb|ACN34239.1| unknown [Zea mays]
 gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 443

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 104/357 (29%), Positives = 164/357 (45%), Gaps = 33/357 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT++S      I     
Sbjct: 15  VVLVSAG--ASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVIC 72

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +ED   + ++GW   G+LG G+  +   P PV+ L   ++   ACG      
Sbjct: 73  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC-- 130

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG GT     T+DS +         P+ I A     +  +A
Sbjct: 131 LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFESVCVKMIA 176

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  +P +V   +   ++    +++ G  
Sbjct: 177 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV----LVACGWR 232

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  +  L    +  +  G  H   + ++
Sbjct: 233 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                WG  ++G++G G     SS  P +V   E   +  VACG+ H+L + ++ NV
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSS--PGQVSFPEDQKISQVACGWRHTLALSEKKNV 347



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/255 (29%), Positives = 120/255 (47%), Gaps = 19/255 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 92  WGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 149

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 209

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  E +   ACG   T+ +S  +  ++   G  +YGQLGHG          
Sbjct: 210 RLLPEKVSSVEGEKMVLVACGWRHTITVS--DSGNLYTYGWSKYGQLGHGD--------- 258

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   TI +++ G  HT+A+ S+G +Y WG+  +G++G     D
Sbjct: 259 -----FEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 313

Query: 269 EWVPRRVDVFQRNNV 283
              P +V   +   +
Sbjct: 314 HSSPGQVSFPEDQKI 328



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/180 (27%), Positives = 87/180 (48%), Gaps = 12/180 (6%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           +T+V V+ G +H+VA+ +   + +WG G  G+LGH + +D  VP  +  F    +    +
Sbjct: 13  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAIT---S 69

Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           VI      ++ +    Q+Y W     G+L + N  D   P+P+  L G  ++ +  G+ H
Sbjct: 70  VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH 129

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              V       SWG  Q G+LG G    + S +P+K+   E + V  +A G  H+  + +
Sbjct: 130 CLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 18/198 (9%)

Query: 1   MAELEAEKMVEEETG------KEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLV 54
           ++ +E EKMV    G          G L   G + +  +G   G  + +LV P ++  L 
Sbjct: 216 VSSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGH--GDFEDHLV-PHKVEALK 272

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
              I  ++ G    H +A+  EG+ Y WG N+ GQ+G G+      P  VS     KI +
Sbjct: 273 DSTISQISGGWR--HTMALTSEGKLYGWGWNKFGQVGVGNNDDHSSPGQVSFPEDQKISQ 330

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACG 169
              G  HT+ ++E  N  ++G    GQLG+G I +   P  +  L S+ +A     ++  
Sbjct: 331 VACGWRHTLALSEKKNVFSWGRGTSGQLGNGEIVDRNTPVLIDALSSDGSACKKLESSTA 390

Query: 170 ADFT--VWLSSVEGASIL 185
           A F   VW+S  E  +I+
Sbjct: 391 APFAAKVWVSPSERYAIV 408


>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 3151

 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 126/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG +   DRP ++ 
Sbjct: 2335 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIE 2394

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 2395 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 2454

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 2455 GIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 2500

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +V+V CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q    +
Sbjct: 2501 SLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAI 2560

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++  C    G++Y WG
Sbjct: 2561 ----AIATGSLHCVCCTEDGEVYTWG 2582



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 1316 GKVYACGEATNGRLGL--GLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 1373

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 1374 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 1433

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 1434 GRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 1493

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 1494 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 1539

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 1540 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 1587



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 165/364 (45%), Gaps = 37/364 (10%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVS 105
            P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G        P  V+
Sbjct: 1288 PSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGLSSGTVPLPRQVT 1345

Query: 106  ELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
             LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P  +  L ++ 
Sbjct: 1346 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR 1405

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            +   ACG+  +  L+S     +   GL +YG+LGHG        D++ +L      +P+ 
Sbjct: 1406 IRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DTTTQL------KPKM 1449

Query: 223  IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            +  L G  +V+VACG+    T+A+  +G V++WG G +G+LG    +   +P+ ++    
Sbjct: 1450 VKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNG 1509

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGWNLR 334
              V      I  G+  S      G ++ WGK       +G D    KP  +  L G  + 
Sbjct: 1510 QGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 1565

Query: 335  CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
             +  G +H     DS  + +WG   +G+ G G      +  P  V  LEG  +  VACG 
Sbjct: 1566 HVAVGALHCLAVTDSGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGS 1623

Query: 394  GHSL 397
             HS+
Sbjct: 1624 SHSV 1627



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 145/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 2260 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 2319

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 2320 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 2377

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG+ +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 2378 KLGHGSRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 2423

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q + V+       +G   + C      ++ W    
Sbjct: 2424 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--GIACGSGDAQTLCLTDDDTVWSWGDGD 2481

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        +  + +WG   Y  LG+G 
Sbjct: 2482 YGKLGRGGSDGCKVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKGDYHRLGHG- 2540

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G   I++A G  H
Sbjct: 2541 -SDDHVRRPRQVQGLQGKKAIAIATGSLH 2568



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 2307 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 2366

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG GS      P  +  L   EV   A G   +  +++     +   G
Sbjct: 2367 EVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA--AGDLYTWG 2424

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGH         DS      E Q +P+ + AL G  +V +ACG+    T+ +  
Sbjct: 2425 KGRYGRLGHS--------DS------EDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTD 2470

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 2471 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVV----RVECGSQFSVALTKAGAV 2526

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G     + +G++H      D    +WG    
Sbjct: 2527 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDE 2586

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 2587 GQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 2622



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 34/285 (11%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 2258 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 2316

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 2317 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 2362

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 2363 SSEGEVYSWGEAEDGKLGHGSRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 2418

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWG 355
             LY WGK +      ++ +D + PK +  L G  +  +   SG+       D   + SWG
Sbjct: 2419 DLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVGIACGSGDAQTLCLTDDDTVWSWG 2478

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 2479 DGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVRVECGSQFSVALT 2521



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 1391 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDTTTQLKPK 1448

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 1449 MVKVLLGHRVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 1508

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                   
Sbjct: 1509 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 1566

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        DS    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 1567 VAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 1626

Query: 242  VA 243
            VA
Sbjct: 1627 VA 1628



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 73/169 (43%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 2487 RGGSDGCKV-PMKIDSLTGLGV--VRVECGSQFSVALTKAGAVYTWGKGDYHRLGHGSDD 2543

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K      G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 2544 HVRRPRQVQGLQGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 2603

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   +V   ACG+  T+  S+ + AS         G+L      EYN
Sbjct: 2604 AALQGKKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPMEYN 2644



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 1547 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRK 1604

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 1605 PTLVQGLEGQKITRVACGSSHSVAWT 1630



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 2253 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 2309

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 2310 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 2368

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  + 
Sbjct: 2369 YSWGEAEDGKLGHG--SRSPCDRPRVIESLRGIEVVDVAAGGAHSACVT 2415


>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 4834

 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 152/320 (47%), Gaps = 25/320 (7%)

Query: 44   LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
            +++PT L  +  + I+ VA      HC+A+  +G+ Y+WG  + G+LGHG+K   D P +
Sbjct: 4041 ILTPTLLESIQHIFIKKVAVNSGGKHCLALSTDGKVYSWGEGDDGKLGHGNKNGCDHPQL 4100

Query: 104  VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-E 162
            +  L   +I     G +H+  VT  G    +G  ++G+LG G   ++++P  V  L+  +
Sbjct: 4101 IDALQGKEIVDIACGGAHSAAVTAGGEIYTWGKGRYGRLGHGDSEDQMKPKLVETLIGFK 4160

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            V   ACG+     L   +  ++ + G   YG+LG G  +                  P  
Sbjct: 4161 VIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKI--------------PMK 4206

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            I +LAG  +VKV CG+  +VA+   G VYTWG G Y RLGH   +    P+++   Q   
Sbjct: 4207 IESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKK 4266

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCM 336
            ++     I+ GS++    +  G+++ WG       GD  M     P+ ++ L G N+  +
Sbjct: 4267 II----CIATGSLHCVACSDLGEVFTWGDNDEGQLGDGTMNAIHRPRLVVTLQGKNINRV 4322

Query: 337  DSGNMHHFVGADSSCISWGH 356
              G+ H    + +   S  H
Sbjct: 4323 ACGSAHSLAWSTNKSTSATH 4342



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 149/331 (45%), Gaps = 30/331 (9%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR       N+ +P +L  L    I+ VA      H +A+ ++G+ 
Sbjct: 3037 GKLYACGE---GTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKV 3093

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGH +++  DRP ++  L   +I+    G SH+  ++  G    +G  ++
Sbjct: 3094 FSWGEGEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGELFTWGLGEY 3153

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGH 197
            G+LG G    ++ P  V+ L+   +   ACG+ D      S EG  + + G   +G+LG 
Sbjct: 3154 GRLGHGDNLTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGL-VFSWGDGDFGKLGR 3212

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G                E    P  I  L G  +  + CG   ++A+   G VYTWG G 
Sbjct: 3213 G--------------GSEGCDIPHNIERLNGLGVCMIECGAQFSLALTKFGQVYTWGKGD 3258

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LK 313
            Y RLGH   +    P  V+      ++     ++ G+++  C    GQ+Y WG      +
Sbjct: 3259 YFRLGHGSDQHVRKPTLVESLSEKKIVH----VAVGALHCLCATDQGQVYAWGDNDHGQQ 3314

Query: 314  NNGDDWMYPKP--LMDLSGWNLRCMDSGNMH 342
             NG   +  KP  +++L G  +  +  G+ H
Sbjct: 3315 GNGTILVNRKPSLVLNLEGVRVNRVACGSSH 3345



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/373 (29%), Positives = 169/373 (45%), Gaps = 37/373 (9%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            G L G+ V  P     L  +    +A G  S   V+ D  G+ Y  G    G+LG G   
Sbjct: 2999 GGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIVSYD--GKLYACGEGTNGRLGLGHSN 3056

Query: 97   QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
                P  ++ L++Y IKK    +G  H + +T DG   ++G  + G+LG  +  +   P 
Sbjct: 3057 NVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHDNRLSLDRPK 3116

Query: 155  PVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
             +  L S+ +   ACG+  +  +SS     +   GL +YG+LGHG DN            
Sbjct: 3117 MIEALKSKRIRDIACGSSHSAAISST--GELFTWGLGEYGRLGHG-DN------------ 3161

Query: 214  YEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
               Q RP+ + AL G  IV+VACG+    T+A+ ++G V++WG G +G+LG    +   +
Sbjct: 3162 -LTQLRPKLVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDI 3220

Query: 272  PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM- 326
            P  ++      V     +I  G+  S      GQ+Y WGK       +G D    KP + 
Sbjct: 3221 PHNIERLNGLGV----CMIECGAQFSLALTKFGQVYTWGKGDYFRLGHGSDQHVRKPTLV 3276

Query: 327  -DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
              LS   +  +  G +H     D   + +WG   +G+ G G      +  P  V  LEG+
Sbjct: 3277 ESLSEKKIVHVAVGALHCLCATDQGQVYAWGDNDHGQQGNGTI--LVNRKPSLVLNLEGV 3334

Query: 385  HVISVACGYGHSL 397
             V  VACG  HS+
Sbjct: 3335 RVNRVACGSSHSI 3347



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 146/335 (43%), Gaps = 30/335 (8%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    LS  +  +   G    + VT DG   A G+
Sbjct: 3968 GTIYGWGHNHRGQLGGVEGPKVKIPTSCEALSALRPVQLVGGEQTLLAVTSDGKVYATGY 4027

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G     + P+    ++ +  +  A   G    + LS+     + + G    G
Sbjct: 4028 GAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALST--DGKVYSWGEGDDG 4085

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  N  +               P+ I AL G+ IV +ACG  H+ AV + G +YTW
Sbjct: 4086 KLGHGNKNGCD--------------HPQLIDALQGKEIVDIACGGAHSAAVTAGGEIYTW 4131

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+      V+  +    +G   + C      ++ W    
Sbjct: 4132 GKGRYGRLGHGDSEDQMKPKLVETLIGFKVI--DIACGSGDAQTLCITDDDNVWSWGDGD 4189

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S S  +WG   Y  LG+G 
Sbjct: 4190 YGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG- 4248

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +    PKK+  L+G  +I +A G  H +   D
Sbjct: 4249 -SDEHVRHPKKIAALQGKKIICIATGSLHCVACSD 4282



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 154/339 (45%), Gaps = 34/339 (10%)

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTED 128
            +AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ D
Sbjct: 4014 LAVTSDGKVYATGYGAGGRLGLGGTDTILTPTLLESIQHIFIKKVAVNSGGKHCLALSTD 4073

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
            G   ++G    G+LG G+      P  +  L   E+   ACG   +  +++  G  I   
Sbjct: 4074 GKVYSWGEGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTA--GGEIYTW 4131

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVD 245
            G  +YG+LGHG        DS      E Q +P+ +  L G  ++ +ACG+    T+ + 
Sbjct: 4132 GKGRYGRLGHG--------DS------EDQMKPKLVETLIGFKVIDIACGSGDAQTLCIT 4177

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
                V++WG G YG+LG        +P +++      V+  E     GS  S      G 
Sbjct: 4178 DDDNVWSWGDGDYGKLGRGGSDGCKIPMKIESLAGLGVVKVE----CGSQFSVALTRSGS 4233

Query: 306  LYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQ 358
            +Y WGK     L +  D+ + +PK +  L G  + C+ +G++H    +D     +WG   
Sbjct: 4234 VYTWGKGDYHRLGHGSDEHVRHPKKIAALQGKKIICIATGSLHCVACSDLGEVFTWGDND 4293

Query: 359  YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
             G+LG G     +   P+ V  L+G ++  VACG  HSL
Sbjct: 4294 EGQLGDGTMN--AIHRPRLVVTLQGKNINRVACGSAHSL 4330



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 132/302 (43%), Gaps = 29/302 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++    G +I  +AA     H +A+  +G  Y+WG  + G+LGHGD   RD+PT ++E
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITE 569

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    +     G +++  VT  G    +G   +G+LG G+  +   P+ V  L    +  
Sbjct: 570 LVGKNVIHISCGATYSAAVTSSGEVYTWGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIVD 629

Query: 166 TACGADFTVWLSSVEGASILNAGLP-QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
            ACG+         +  ++ N GL   +G  G+G      +  S           P+ I 
Sbjct: 630 IACGS------GDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKT---------PKLIE 674

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L    + +V CG+  ++A+   G VYTWG G   RLGH  +     P+ V+      + 
Sbjct: 675 KLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCI- 733

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMD 337
                ++ GS +       G++Y WG+  +NG        +   P  L  L G N+  +D
Sbjct: 734 ---KKVAVGSGHVLALTDDGEVYGWGR-NDNGQVGETSETNVSEPTLLTLLQGKNIVDID 789

Query: 338 SG 339
            G
Sbjct: 790 CG 791



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 25/216 (11%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG +N              ++ +P  I  L G+ ++ ++CG  ++ AV S G VYT
Sbjct: 551 GRLGHGDNN--------------SRDQPTKITELVGKNVIHISCGATYSAAVTSSGEVYT 596

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           WG G YGRLGH   +D  VP  V   +   ++  +    +G   +      G ++ WG  
Sbjct: 597 WGRGNYGRLGHGTSEDHTVPTLVVGLKDYFIV--DIACGSGDAQTLAVTNTGLVFSWGDG 654

Query: 313 KNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYG 365
                     D    PK +  L    +  +  G+        S S  +WG      LG+G
Sbjct: 655 GYGKLGTGGSDGSKTPKLIEKLQDIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHG 714

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              +     PK V+ L G  +  VA G GH L + D
Sbjct: 715 --SENHVRFPKLVEGLNGKCIKKVAVGSGHVLALTD 748



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 133/293 (45%), Gaps = 32/293 (10%)

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
           A A   H++ ++ DG+  ++G    G+LG G   +  +P+ +  LV   V   +CGA ++
Sbjct: 526 AHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITELVGKNVIHISCGATYS 585

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             ++S     +   G   YG+LGHGT  ++                P  +  L    IV 
Sbjct: 586 AAVTS--SGEVYTWGRGNYGRLGHGTSEDHTV--------------PTLVVGLKDYFIVD 629

Query: 234 VACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           +ACG+    T+AV + G V++WG GGYG+LG         P+ ++  Q   V    A + 
Sbjct: 630 IACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEV----ARVY 685

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
            GS  S      G +Y WGK  N+       +   +PK +  L+G  ++ +  G+ H   
Sbjct: 686 CGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSGHVLA 745

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +  D     WG    G++G     + + + P  + +L+G +++ + CG   S+
Sbjct: 746 LTDDGEVYGWGRNDNGQVG--ETSETNVSEPTLLTLLQGKNIVDIDCGPNQSI 796



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 93/242 (38%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +L  P  +  L    IR +A G  S H  A+   G  +TWG  E G+LGHGD + + RP 
Sbjct: 3111 SLDRPKMIEALKSKRIRDIACG--SSHSAAISSTGELFTWGLGEYGRLGHGDNLTQLRPK 3168

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  + I +   G      +      L F W     G+LG G       P  +  L 
Sbjct: 3169 LVKALLGHHIVQVACGSRDAQTLALSAEGLVFSWGDGDFGKLGRGGSEGCDIPHNIERLN 3228

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN--------EYNTKDSSVK 211
               V    CGA F++ L+      +   G   Y +LGHG+D         E  ++   V 
Sbjct: 3229 GLGVCMIECGAQFSLALTKF--GQVYTWGKGDYFRLGHGSDQHVRKPTLVESLSEKKIVH 3286

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G  + +VACG++H+
Sbjct: 3287 VAVGALHCLCATDQGQVYAWGDNDHGQQGNGTILVNRKPSLVLNLEGVRVNRVACGSSHS 3346

Query: 242  VA 243
            +A
Sbjct: 3347 IA 3348



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/129 (31%), Positives = 61/129 (47%), Gaps = 1/129 (0%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           DI      C S   +A+   G  YTWG+ +  +LGHG +     P +V  L+   IKK  
Sbjct: 678 DIEVARVYCGSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVA 737

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVW 175
            G  H + +T+DG    +G N +GQ+G  S  N  EP+ +  L    +    CG + ++ 
Sbjct: 738 VGSGHVLALTDDGEVYGWGRNDNGQVGETSETNVSEPTLLTLLQGKNIVDIDCGPNQSIA 797

Query: 176 LSSVEGASI 184
            SS    SI
Sbjct: 798 WSSSNTYSI 806



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P  I    G+ I K+A   +  H++A+   G VY+WG G  GRLGH +      P ++  
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITE 569

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSG 330
               NV+     IS G+  S+     G++Y WG+  N G       +D   P  ++ L  
Sbjct: 570 LVGKNVIH----ISCGATYSAAVTSSGEVYTWGR-GNYGRLGHGTSEDHTVPTLVVGLKD 624

Query: 331 W---NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           +   ++ C  SG+       ++  + SWG   YG+LG G  G   S  PK ++ L+ + V
Sbjct: 625 YFIVDIAC-GSGDAQTLAVTNTGLVFSWGDGGYGKLGTG--GSDGSKTPKLIEKLQDIEV 681

Query: 387 ISVACGYGHSLVIV 400
             V CG   SL + 
Sbjct: 682 ARVYCGSQFSLALT 695



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  PT +  L    I  VA G + C C A D +G+ Y WG N+ GQ G+G  +   +
Sbjct: 3267 DQHVRKPTLVESLSEKKIVHVAVGALHCLC-ATD-QGQVYAWGDNDHGQQGNGTILVNRK 3324

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            P++V  L   ++ +   G SH++  T
Sbjct: 3325 PSLVLNLEGVRVNRVACGSSHSIAWT 3350



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 15/164 (9%)

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            DS   V+ WG     +LG  +     VP    V+  +        I+ GS +    +  G
Sbjct: 2982 DSPTKVFVWGLNDKDQLGGLKGSKVKVP----VYSESLTALKPIHIAGGSKSLFIVSYDG 3037

Query: 305  QLYMWGKLKN------NGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSCISWG 355
            +LY  G+  N      + ++   P  L  L+ + ++   + SG  H   +  D    SWG
Sbjct: 3038 KLYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKVAVHSGGKHAMALTLDGKVFSWG 3097

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              + G+LG+    + S   PK ++ L+   +  +ACG  HS  I
Sbjct: 3098 EGEDGKLGHD--NRLSLDRPKMIEALKSKRIRDIACGSSHSAAI 3139


>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
           Group]
 gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
 gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 453

 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 19/256 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L GV I  +A  C   HC+AV V G  ++WGRN+ GQ
Sbjct: 108 WGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA--CGDSHCLAVTVAGHVHSWGRNQNGQ 165

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +      ++K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 166 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 225

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  + +   ACG   T+ +SS    SI   G  +YGQLGHG          
Sbjct: 226 RLIPEKVSSVNGQKMVLVACGWRHTITVSS--SGSIYTYGWSKYGQLGHGD--------- 274

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   TI +++ G  HT+A+ + G +Y WG+  +G++G  + +D
Sbjct: 275 -----FEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED 329

Query: 269 EWVPRRVDVFQRNNVL 284
              P +V+      V+
Sbjct: 330 HCSPVQVNFPNEQKVV 345



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 41/363 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+   G   +WGR E GQLGHGD   R  PT+++  + +     G 
Sbjct: 27  VVLISAG--ASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLT--AAFDDAPGGV 82

Query: 118 ------GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
                 G  HT   +++   L ++GW   G+LG G+  +   P P++ L    +T  ACG
Sbjct: 83  ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACG 142

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
                 L+      + + G  Q GQLG G     NT+DS +         P+ I A  G 
Sbjct: 143 DSHC--LAVTVAGHVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIQAFEGV 186

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +  +A G  HT AV   G +Y WG+G YG LG  ++ D  +P +V       ++    +
Sbjct: 187 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV----L 242

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++ G  ++   +  G +Y +G  K     +GD  D + P  L  L    +  +  G  H 
Sbjct: 243 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHT 302

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
             + AD     WG  ++G++G G    +    P +V+      V+ VACG+ H+L + + 
Sbjct: 303 MALAADGKLYGWGWNKFGQVGVGD--NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 360

Query: 403 TNV 405
            NV
Sbjct: 361 KNV 363



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 149/309 (48%), Gaps = 35/309 (11%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           V E  +  +    AG SH+V +   G   ++G  + GQLG G   +   P+ +     + 
Sbjct: 19  VPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDA 78

Query: 163 ----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE-YNTKDSSVKLAYEAQ 217
                +   CGAD T   S  E   + + G   +G+LGHG  ++ +N             
Sbjct: 79  PGGVASVVICGADHTTAYSDEE-LQLYSWGWGDFGRLGHGNSSDVFN------------- 124

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P+ I AL G  I ++ACG +H +AV   G+V++WG    G+LG    +D  +P+++  
Sbjct: 125 --PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQA 182

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGW 331
           F+   V     +I+AG+ +++     G LY   WG+  N G    DD + P+ +  ++G 
Sbjct: 183 FEGVRV----KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ 238

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H   V +  S  ++G ++YG+LG+G +  +   +P K++ L+   +  ++
Sbjct: 239 KMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDF--EDHLVPHKLEALKDTTISQIS 296

Query: 391 CGYGHSLVI 399
            G+ H++ +
Sbjct: 297 GGWRHTMAL 305



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 10/202 (4%)

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           + +++  E      A+      ++V ++ G +H+VA+ S G V +WG G  G+LGH + +
Sbjct: 4   TGMEMEVEVAGDDEAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAE 63

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG-QLYMW-----GKLKN-NGDDWM 320
           D  VP  +     +      +V+  G+ +++  +    QLY W     G+L + N  D  
Sbjct: 64  DRPVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVF 123

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
            P+P+  L G  +  +  G+ H   V       SWG  Q G+LG G    + S +P+K+ 
Sbjct: 124 NPQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQ 181

Query: 380 ILEGMHVISVACGYGHSLVIVD 401
             EG+ V  +A G  H+  + +
Sbjct: 182 AFEGVRVKMIAAGAEHTAAVTE 203



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  + +LV P +L  L    I  ++ G    H +A+  +G+ Y WG N+ GQ+G GD   
Sbjct: 273 GDFEDHLV-PHKLEALKDTTISQISGGWR--HTMALAADGKLYGWGWNKFGQVGVGDNED 329

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
              P  V+  ++ K+ +   G  HT+ +TE  N  ++G    GQLG G I +   P  + 
Sbjct: 330 HCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 389

Query: 158 CLVSEVTA-------TACGADFTVWLSSVEGASIL 185
            L S+ +A        A      VW+S  E  +I+
Sbjct: 390 ALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIV 424


>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
          Length = 4840

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 20/267 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 4032 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 4091

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++    AG +H+  +T  G+   +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 4092 SLRGIEVVDVAAGGAHSACITAAGDLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGYRVI 4151

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 4152 DIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 4197

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWG-FGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            +L G  +VKV CG+  +VA+   G VYTW  F  Y RLGH        PR+V   Q   V
Sbjct: 4198 SLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKV 4257

Query: 284  LPPEAVISAGSVNSSCTAGGGQLYMWG 310
            +     I+ GS++  C    G++Y WG
Sbjct: 4258 I----AIATGSLHCVCCTEDGEVYTWG 4280



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 3015 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3072

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3132

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3133 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3192

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3193 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3238

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3239 FRLGHGTDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3286



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2977 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3034

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3035 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3094

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3095 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3141

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3142 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3198

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3199 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3254

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3255 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3312

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3313 QKITRVACGSSHSV 3326



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKA 115
            +R  AAG  S    A  +  + + WG N++ QLG   G KI+   P+    LS   + + 
Sbjct: 2948 VRKKAAGLES----AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQV 3001

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGAD 171
              G      VT +G   A G   +G+LG    SG++    + + +   V +  A   G  
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGR 3061

Query: 172  FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
              + L +V+G  + + G    G+LGH +    +              +PR I AL  + I
Sbjct: 3062 HAMAL-TVDG-KVFSWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRI 3105

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
              +ACG++H+ A+ S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++
Sbjct: 3106 RDIACGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VA 3161

Query: 292  AGSVNSSCTA--GGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             GS ++   A    G ++ W     GKL   G +    P+ +  L+G  +  ++ G    
Sbjct: 3162 CGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFS 3221

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                 S  + +WG   Y  LG+G         P+ V+ L G  ++ VA G  H L + D 
Sbjct: 3222 LALTKSGVVWTWGKGDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDT 3279

Query: 403  TNV 405
              V
Sbjct: 3280 GQV 3282



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    IVKV CG+  ++A+   G VYTWG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  +   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLKGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 31/330 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3957 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 4016

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 4017 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 4074

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  + + G ++TW
Sbjct: 4075 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACITAAGDLFTW 4120

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ V+  Q   V+  +    +G   + C      ++ W    
Sbjct: 4121 GKGRYGRLGHGDSEDQLKPKLVEALQGYRVI--DIACGSGDAQTLCLTDDDTVWSWGDGD 4178

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWG-HAQYGELGYG 365
             GKL   G D    P  +  L+G  +  ++ G+        S  + +W     Y  LG+G
Sbjct: 4179 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHG 4238

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGH 395
                     P++V  L+G  VI++A G  H
Sbjct: 4239 --SDDHVRRPRQVQGLQGKKVIAIATGSLH 4266



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 90/353 (25%), Positives = 143/353 (40%), Gaps = 48/353 (13%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C     + +   GR YT   N    LG         P +V  L+   I K  A   
Sbjct: 455 VQVACAEKRFLILSRNGRVYTQAYNS-DTLG---------PQLVQSLASRNIVKIAAHSD 504

Query: 121 --HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-----SEVTATACGADFT 173
             H + ++ +G   ++G    G+LG G      EP  +  L        V   ACG+ ++
Sbjct: 505 GHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYS 564

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             +++ EG  +   G   YG+LGHG+               E Q  P  +  L G  ++ 
Sbjct: 565 AAITA-EG-ELYTWGRGNYGRLGHGSS--------------EDQTIPMLVTGLKGLKVID 608

Query: 234 VACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           V+CG+    T+AV   G V++WG G YG+LG         P+ ++  Q  +++     + 
Sbjct: 609 VSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDIVK----VR 664

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
            GS  S      GQ+Y WGK  N        +   YPK L  L G  +  + +G+ H   
Sbjct: 665 CGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVAAGSTHCLA 724

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +  DS   SWG     +  +    + +   P  +  L+  H++ +ACG   S 
Sbjct: 725 LTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSF 775



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 146/339 (43%), Gaps = 35/339 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 4004 AVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEG 4063

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   A G   +  +++     +   G
Sbjct: 4064 EVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACITA--AGDLFTWG 4121

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ + AL G  ++ +ACG+    T+ +  
Sbjct: 4122 KGRYGRLGHG--------DS------EDQLKPKLVEALQGYRVIDIACGSGDAQTLCLTD 4167

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP ++D      V+     +  GS  S      G +
Sbjct: 4168 DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVK----VECGSQFSVALTKSGAV 4223

Query: 307  YMWGKLKN-------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
            Y W   ++       + D    P+ +  L G  +  + +G++H      D    +WG   
Sbjct: 4224 YTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDND 4283

Query: 359  YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
             G+LG G     +   P+ V  L+G  +  VACG  H+L
Sbjct: 4284 EGQLGDG--TTNAIQRPRLVAALQGKKINRVACGSAHTL 4320



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 121/267 (45%), Gaps = 34/267 (12%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVFSWGCGDGGRLGHG---------DTVP 535

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648

Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           PK    L DL    +RC    ++   +  D    +WG      LG+G   ++    PK +
Sbjct: 649 PKLIEKLQDLDIVKVRCGSQFSIA--LTKDGQVYTWGKGDNQRLGHG--TEEHVRYPKLL 704

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
           + L+G  VI VA G  H L + + + V
Sbjct: 705 EGLKGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 119/287 (41%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G     
Sbjct: 3955 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYAT 4014

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
                            Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 4015 G---------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 4059

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 4060 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACITAAG 4115

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             L+ WGK +       + +D + PK +  L G+  R +D    SG+       D   + S
Sbjct: 4116 DLFTWGKGRYGRLGHGDSEDQLKPKLVEALQGY--RVIDIACGSGDAQTLCLTDDDTVWS 4173

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 4174 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 4218



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3090 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3147

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3148 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3207

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3208 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVH 3265

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3266 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3325

Query: 242  VA 243
            VA
Sbjct: 3326 VA 3327



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P +++ L G  +  +A G  S HCV    +G  YTWG N+ GQLG G      R
Sbjct: 4240 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR 4297

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P +V+ L   KI +   G +HT+
Sbjct: 4298 PRLVAALQGKKINRVACGSAHTL 4320



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3246 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3303

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3304 PTLVQGLEGQKITRVACGSSHSVAWT 3329



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ YTWG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGLKGKKVIDVA 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 102/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  KM+   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               I K   G   ++ +T+DG    +G   + +LG G+  +   P              
Sbjct: 656 QDLDIVKVRCGSQFSIALTKDGQVYTWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 703 -------LLEGLKGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 53/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   +V+VAC                                           
Sbjct: 443 PIQCEGLANLGVVQVACAEKRFLILSRNGRVYTQAYNSDTLGPQLVQSLASRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G V++WG G  GRLGH +      P+ +              I+ GS 
Sbjct: 503 SDGHHYLALSANGEVFSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPMLVTGLKG--LKVIDVSCGSGDAQTLA 620

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + ++ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALT 674



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 18/186 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  + K A G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2942 ANTGSLVRKKAAGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2999

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 3000 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3055

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 3056 VHSGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3113

Query: 395  HSLVIV 400
            HS  I 
Sbjct: 3114 HSAAIT 3119



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3950 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 4006

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 4007 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 4065

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS  I 
Sbjct: 4066 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHSACIT 4112


>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
          Length = 448

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 19/256 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L GV I  +A  C   HC+AV V G  ++WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA--CGDSHCLAVTVAGHVHSWGRNQNGQ 160

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +      ++K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 161 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  + +   ACG   T+ +SS    SI   G  +YGQLGHG          
Sbjct: 221 RLIPEKVSSVNGQKMVLVACGWRHTITVSS--SGSIYTYGWSKYGQLGHGD--------- 269

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   TI +++ G  HT+A+ + G +Y WG+  +G++G  + +D
Sbjct: 270 -----FEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWGWNKFGQVGVGDNED 324

Query: 269 EWVPRRVDVFQRNNVL 284
              P +V+      V+
Sbjct: 325 HCSPVQVNFPNEQKVV 340



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 103/363 (28%), Positives = 166/363 (45%), Gaps = 41/363 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+   G   +WGR E GQLGHGD   R  PT+++  + +     G 
Sbjct: 22  VVLISAG--ASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLT--AAFDDAPGGV 77

Query: 118 ------GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
                 G  HT   +++   L ++GW   G+LG G+  +   P P++ L    +T  ACG
Sbjct: 78  ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACG 137

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
                 L+      + + G  Q GQLG G     NT+DS +         P+ I A  G 
Sbjct: 138 DSHC--LAVTVAGHVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIQAFEGV 181

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +  +A G  HT AV   G +Y WG+G YG LG  ++ D  +P +V       ++    +
Sbjct: 182 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV----L 237

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++ G  ++   +  G +Y +G  K     +GD  D + P  L  L    +  +  G  H 
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHT 297

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
             + AD     WG  ++G++G G    +    P +V+      V+ VACG+ H+L + + 
Sbjct: 298 MALAADGKLYGWGWNKFGQVGVGD--NEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEA 355

Query: 403 TNV 405
            NV
Sbjct: 356 KNV 358



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 149/309 (48%), Gaps = 35/309 (11%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           V E  +  +    AG SH+V +   G   ++G  + GQLG G   +   P+ +     + 
Sbjct: 14  VPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDA 73

Query: 163 ----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE-YNTKDSSVKLAYEAQ 217
                +   CGAD T   S  E   + + G   +G+LGHG  ++ +N             
Sbjct: 74  PGGVASVVICGADHTTAYSDEE-LQLYSWGWGDFGRLGHGNSSDVFN------------- 119

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P+ I AL G  I ++ACG +H +AV   G+V++WG    G+LG    +D  +P+++  
Sbjct: 120 --PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQA 177

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGW 331
           F+   V     +I+AG+ +++     G LY   WG+  N G    DD + P+ +  ++G 
Sbjct: 178 FEGVRV----KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ 233

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H   V +  S  ++G ++YG+LG+G +  +   +P K++ L+   +  ++
Sbjct: 234 KMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDF--EDHLVPHKLEALKDTTISQIS 291

Query: 391 CGYGHSLVI 399
            G+ H++ +
Sbjct: 292 GGWRHTMAL 300



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 10/200 (5%)

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           +++  E      A+      ++V ++ G +H+VA+ S G V +WG G  G+LGH + +D 
Sbjct: 1   MEMEVEVAGDDEAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDR 60

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG-QLYMW-----GKLKN-NGDDWMYP 322
            VP  +     +      +V+  G+ +++  +    QLY W     G+L + N  D   P
Sbjct: 61  PVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNP 120

Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           +P+  L G  +  +  G+ H   V       SWG  Q G+LG G    + S +P+K+   
Sbjct: 121 QPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQAF 178

Query: 382 EGMHVISVACGYGHSLVIVD 401
           EG+ V  +A G  H+  + +
Sbjct: 179 EGVRVKMIAAGAEHTAAVTE 198



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 10/155 (6%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  + +LV P +L  L    I  ++ G    H +A+  +G+ Y WG N+ GQ+G GD   
Sbjct: 268 GDFEDHLV-PHKLEALKDTTISQISGGWR--HTMALAADGKLYGWGWNKFGQVGVGDNED 324

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
              P  V+  ++ K+ +   G  HT+ +TE  N  ++G    GQLG G I +   P  + 
Sbjct: 325 HCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMID 384

Query: 158 CLVSEVTA-------TACGADFTVWLSSVEGASIL 185
            L S+ +A        A      VW+S  E  +I+
Sbjct: 385 ALSSDGSACKQLESSKAVPMSAKVWVSPSERYAIV 419


>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
            [Metaseiulus occidentalis]
          Length = 4496

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 138/287 (48%), Gaps = 23/287 (8%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N+  P  L  L    I+ VA      H +A+ ++GR ++WG  E G+LGHG+KI  DRP 
Sbjct: 2724 NVAQPKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPK 2783

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            +V  L   +I+    G SH+  VT  G    +G  ++G+LG G    +++P  VR L  E
Sbjct: 2784 LVESLKCKRIRDVACGSSHSAAVTSSGELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHE 2843

Query: 163  -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             V   ACG+     L+  E   + + G   +G+LG G      +  SS+         P+
Sbjct: 2844 RVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKG-----GSDGSSL---------PQ 2889

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             +  L  + +++V CG   ++A+   G V+TWG G Y RLGH        P+ V+     
Sbjct: 2890 NVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADK 2949

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP 324
            NV+     +S G+++       G++Y WG      + NG+  +  KP
Sbjct: 2950 NVIQ----VSVGALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKP 2992



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 157/346 (45%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            ++E + + WG N++ QLG   G KI+   P     +S  K      G     +V+ DG  
Sbjct: 2649 NIECKVFVWGLNDKDQLGGLKGSKIK--EPKFSEVISNLKPMNIAGGSKSLFIVSHDGKV 2706

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N  +P P+  L     +  A   G    + L +++G  + + G
Sbjct: 2707 FACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSGGRHALAL-TIDG-RVFSWG 2764

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG            K++Y+   RP+ + +L  + I  VACG++H+ AV S G
Sbjct: 2765 EGEDGKLGHGN-----------KISYD---RPKLVESLKCKRIRDVACGSSHSAAVTSSG 2810

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ--L 306
             +YTWG G YGRLGH +   +  P++V       V+     ++ GS ++   A   +  +
Sbjct: 2811 ELYTWGSGEYGRLGHGDNVPQLKPKQVRALSHERVVQ----VACGSRDAQTLALTERHWV 2866

Query: 307  YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            Y W     GKL   G D    P+ +  L+   +  ++ G      +  +    +WG   Y
Sbjct: 2867 YSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQVECGAQFSLALSKNGKVWTWGKGDY 2926

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G         P+ V+ L   +VI V+ G  H + + DR  V
Sbjct: 2927 FRLGHG--SDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDRGEV 2970



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 172/367 (46%), Gaps = 40/367 (10%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AG 118
            +A G  S   V+ D  G+ +  G    G+LG G      +P  +++LS Y IKK    +G
Sbjct: 2690 IAGGSKSLFIVSHD--GKVFACGEGTNGRLGLGHSHNVAQPKPLTDLSPYFIKKVAVHSG 2747

Query: 119  RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLS 177
              H + +T DG   ++G  + G+LG G+  +   P  V  L    +   ACG+  +  ++
Sbjct: 2748 GRHALALTIDGRVFSWGEGEDGKLGHGNKISYDRPKLVESLKCKRIRDVACGSSHSAAVT 2807

Query: 178  SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            S     +   G  +YG+LGHG DN               Q +P+ + AL+ E +V+VACG
Sbjct: 2808 S--SGELYTWGSGEYGRLGHG-DN-------------VPQLKPKQVRALSHERVVQVACG 2851

Query: 238  TN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            +    T+A+  + +VY+WG G +G+LG        +P+ V+      V+     +  G+ 
Sbjct: 2852 SRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQVIQ----VECGAQ 2907

Query: 296  NSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
             S   +  G+++ WGK     L +  D  + +P+ + +L+  N+  +  G +H     D 
Sbjct: 2908 FSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVGALHCIAVTDR 2967

Query: 350  -SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS-VACGYGHSLVIVDRTNVGE 407
                +WG   +G+ G G     ++ + +K  I+ G+  I+ VACG  HS+         +
Sbjct: 2968 GEVYAWGDNDHGQQGNG-----NTTVNRKPAIVRGLEAITNVACGSSHSVAWSSTGTSPQ 3022

Query: 408  RLDQVIL 414
            +L   IL
Sbjct: 3023 KLHDPIL 3029



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 121/267 (45%), Gaps = 20/267 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT +  L  V +  VA      HC+A+   G  ++WG  + G+LGHG K   +RP ++ 
Sbjct: 3694 TPTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIE 3753

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L    +     G +H+  +T  G    +G  ++G+LG G   ++++P  V  L    V 
Sbjct: 3754 SLRDKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVL 3813

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L       + + G   YG+LG G                +    P+ I 
Sbjct: 3814 DVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRG--------------GSDGCKFPQKID 3859

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNV 283
            +L    ++KV CG+  +VA+ + G VYTWG G Y RLGH  +     P+ V    Q   V
Sbjct: 3860 SLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRV 3919

Query: 284  LPPEAVISAGSVNSSCTAGGGQLYMWG 310
            +     ++ GS++       G+++ WG
Sbjct: 3920 IQ----VAVGSLHCVACTDSGEVFTWG 3942



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/341 (28%), Positives = 150/341 (43%), Gaps = 33/341 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  + WG N RGQLG  +  +    TI   L+  +  +   G      +T DG   A G+
Sbjct: 3619 GVIHGWGHNHRGQLGGVEGAKVKTATICDALTALRPVQIVGGEQTLFALTSDGKVYATGY 3678

Query: 137  NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
               G+LG G   +   P+ +  L    V++V   + G       SS     + + G    
Sbjct: 3679 GAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKHCLALTSS---GDVFSWGEGDD 3735

Query: 193  GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
            G+LGHG+           K   E   RP+ I +L  + +V VACG  H+  + + G +YT
Sbjct: 3736 GKLGHGS-----------KALCE---RPKLIESLRDKHVVSVACGGAHSACITASGELYT 3781

Query: 253  WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
            WG G YGRLGH + +D+  P++V+    +NVL  +    +G   + C +  G ++ W   
Sbjct: 3782 WGKGRYGRLGHGDSEDQLKPKKVEELAGHNVL--DVACGSGDAQTLCVSRDGLVWSWGDG 3839

Query: 310  --GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
              GKL   G D   +P+ +  L    +  ++ G+     + A     +WG   Y  LG+G
Sbjct: 3840 DYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFSVALTAAGVVYTWGKGDYHRLGHG 3899

Query: 366  PYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
               +     P+ V   L+G  VI VA G  H +   D   V
Sbjct: 3900 --SEDHVRRPQAVQGALQGKRVIQVAVGSLHCVACTDSGEV 3938



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 20/210 (9%)

Query: 57   DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA- 115
            D   V+  C   H   +   G  YTWG+   G+LGHGD   + +P  V EL+ + +    
Sbjct: 3757 DKHVVSVACGGAHSACITASGELYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHNVLDVA 3816

Query: 116  -GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFT 173
             G+G + T+ V+ DG   ++G   +G+LG G       P  +  L +  V    CG+ F+
Sbjct: 3817 CGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNAGVIKVECGSQFS 3876

Query: 174  VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIV 232
            V L++     +   G   Y +LGHG+++                 RP+A+  AL G+ ++
Sbjct: 3877 VALTA--AGVVYTWGKGDYHRLGHGSEDHVR--------------RPQAVQGALQGKRVI 3920

Query: 233  KVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            +VA G+ H VA    G V+TWG    G+LG
Sbjct: 3921 QVAVGSLHCVACTDSGEVFTWGDNDEGQLG 3950



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 139/310 (44%), Gaps = 35/310 (11%)

Query: 101  PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
            PT++  L    + +    +G  H + +T  G+  ++G    G+LG GS      P  +  
Sbjct: 3695 PTLIETLQHVIVTQVAVNSGGKHCLALTSSGDVFSWGEGDDGKLGHGSKALCERPKLIES 3754

Query: 159  LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L  + V + ACG   +  +++     +   G  +YG+LGHG        DS      E Q
Sbjct: 3755 LRDKHVVSVACGGAHSACITA--SGELYTWGKGRYGRLGHG--------DS------EDQ 3798

Query: 218  PRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             +P+ +  LAG  ++ VACG+    T+ V   G V++WG G YG+LG         P+++
Sbjct: 3799 LKPKKVEELAGHNVLDVACGSGDAQTLCVSRDGLVWSWGDGDYGKLGRGGSDGCKFPQKI 3858

Query: 276  DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLM-DL 328
            D  Q   V+     +  GS  S      G +Y WGK     L +  +D +  P+ +   L
Sbjct: 3859 DSLQNAGVIK----VECGSQFSVALTAAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGAL 3914

Query: 329  SGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
             G  +  +  G++H     DS    +WG    G+LG G     +   PK V  L+G  + 
Sbjct: 3915 QGKRVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDG--STNAIQRPKLVASLKGKKMN 3972

Query: 388  SVACGYGHSL 397
             VACG  H++
Sbjct: 3973 RVACGSAHTV 3982



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 59   RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
            + +   C +   +A+   G+ +TWG+ +  +LGHG       P +V EL+   + +   G
Sbjct: 2898 QVIQVECGAQFSLALSKNGKVWTWGKGDYFRLGHGSDSHVRWPQVVEELADKNVIQVSVG 2957

Query: 119  RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
              H + VT+ G   A+G N HGQ G+G+     +P+ VR L   +T  ACG+  +V  SS
Sbjct: 2958 ALHCIAVTDRGEVYAWGDNDHGQQGNGNTTVNRKPAIVRGL-EAITNVACGSSHSVAWSS 3016

Query: 179  V 179
             
Sbjct: 3017 T 3017



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 33/65 (50%)

Query: 59   RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
            R +     S HCVA    G  +TWG N+ GQLG G      RP +V+ L   K+ +   G
Sbjct: 3918 RVIQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQRPKLVASLKGKKMNRVACG 3977

Query: 119  RSHTV 123
             +HTV
Sbjct: 3978 SAHTV 3982


>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
          Length = 1054

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 123/246 (50%), Gaps = 24/246 (9%)

Query: 37  KGALDGNLVSPT----RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           +G L  + VS T    R+   +G  I  V   C   H +A+   G  Y WG N  GQLG 
Sbjct: 113 EGQLGLDRVSATIREPRMVKTLGTKI-IVQIACGLKHSIALTNNGELYAWGSNSDGQLGL 171

Query: 93  GDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
           G   + + +P +V  L+   I     G  HT+V+++ G   A+G N  GQLG   I+N  
Sbjct: 172 GSDTKMELKPKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRN 231

Query: 152 EPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
            P  +R L  S V   ACG +F+V+L+   G     AG+  YGQLGHG            
Sbjct: 232 VPCQLRTLRNSRVCYAACGEEFSVFLTMDGGVFTCGAGM--YGQLGHGNKT--------- 280

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDE 269
                ++  PR I  L G T+ +++CG  HT+A V S+G VY WG GG G+LG+R  ++ 
Sbjct: 281 -----SEILPRQIMELMGSTVTQISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNS 335

Query: 270 WVPRRV 275
             P+ V
Sbjct: 336 TTPQVV 341



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 162/381 (42%), Gaps = 74/381 (19%)

Query: 23  LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           +FC GST    +G   G  D N+ +P  +      +I  +A G    + +AV  EG+ Y+
Sbjct: 1   MFCWGSTIHGELGL-GGIEDENIFTPREVNFEKANEIEQIACG--DNYTIAVTKEGQVYS 57

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
            G N+ GQLG      R R  ++S +     +KA  G SHT+VV E G   ++G N  GQ
Sbjct: 58  CGNNDHGQLGQEKG--RKRLQLISGIDPLAFRKAACGSSHTLVVNEWGQLFSWGSNVEGQ 115

Query: 142 LGSGSIRNEI-EPSPVRCLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG   +   I EP  V+ L +++    ACG   ++ L++     +   G    GQLG G+
Sbjct: 116 LGLDRVSATIREPRMVKTLGTKIIVQIACGLKHSIALTN--NGELYAWGSNSDGQLGLGS 173

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
           D +   K             P+ + +LA   I  VACG  HT+ +   G V+ WG   +G
Sbjct: 174 DTKMELK-------------PKLVHSLAAVPIAFVACGGYHTIVISKSGAVFAWGRNTFG 220

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
           +LG  + ++  VP ++   + + V               C A  G+ +            
Sbjct: 221 QLGLSDIQNRNVPCQLRTLRNSRV---------------CYAACGEEFSV---------- 255

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
                                   F+  D    + G   YG+LG+G   + S  +P+++ 
Sbjct: 256 ------------------------FLTMDGGVFTCGAGMYGQLGHG--NKTSEILPRQIM 289

Query: 380 ILEGMHVISVACGYGHSLVIV 400
            L G  V  ++CG  H+L +V
Sbjct: 290 ELMGSTVTQISCGRRHTLALV 310


>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 31/334 (9%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKH 139
           +WGR E GQLGHGD   R  PT+++     ++     G  HT+  ++D   L ++GW   
Sbjct: 44  SWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDF 103

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G+  +   P P+  L   ++   ACG      L+      + + G  Q GQLG G
Sbjct: 104 GRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHC--LTVTFNGQVHSWGRNQNGQLGLG 161

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N +DS +         P+ I A  G  +  +A G  HT A+   G +Y WG+G Y
Sbjct: 162 -----NNQDSLL---------PQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRY 207

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----N 314
           G LG  ++ D  VP +V   +   ++    +++ G  +S   +  G LY +G  K     
Sbjct: 208 GNLGLSDRDDRSVPEKVSSVEGEKMV----LVACGWRHSVSVSSSGALYTYGWSKYGQLG 263

Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
           +GD  D + P+ L  L    +  +  G  H   V  D     WG  ++G++G        
Sbjct: 264 HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHC 323

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           S  P +V+  +   ++ VACG+ H+L + +  N+
Sbjct: 324 S--PVEVNFPDEQKIVQVACGWRHTLALTENKNI 355



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 48/347 (13%)

Query: 53  LVGVDI-RFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           L   D+ R  +  C + H +A  D E + Y+WG  + G+LGHG+      P  +  L   
Sbjct: 67  LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
           KIK+   G SH + VT +G   ++G N++GQLG G+ ++ + P  ++      V   A G
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAG 186

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           A+ T  ++  EG  +   G  +YG LG       +  D SV         P  ++++ GE
Sbjct: 187 AEHTTAIT--EGGDLYGWGWGRYGNLGLS-----DRDDRSV---------PEKVSSVEGE 230

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +V VACG  H+V+V S G +YT+G+  YG+LGH + +D  VPR+++  +      P + 
Sbjct: 231 KMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKD----VPISQ 286

Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGD-----DWMYP---KPLMDLSGWNLR 334
           IS G  ++   A  G+LY WG        +++N D     +  +P   K +    GW   
Sbjct: 287 ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHT 346

Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
              + N + F        SWG    G+LG+G    +++  PK +D L
Sbjct: 347 LALTENKNIF--------SWGRGASGQLGHGEIIDRNT--PKMIDAL 383



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 23/283 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  +  L G+ I+ +A  C   HC+ V   G+ ++WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA--CGDSHCLTVTFNGQVHSWGRNQNGQ 157

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +       +K   AG  HT  +TE G+   +GW ++G LG     +
Sbjct: 158 LGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDD 217

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +  E +   ACG   +V +SS    ++   G  +YGQLGHG          
Sbjct: 218 RSVPEKVSSVEGEKMVLVACGWRHSVSVSS--SGALYTYGWSKYGQLGHGD--------- 266

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                ++    PR + AL    I +++ G  HT+AV   G +Y WG+  +G++G  +  D
Sbjct: 267 -----FQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD 321

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              P  V+      ++     ++ G  ++        ++ WG+
Sbjct: 322 HCSPVEVNFPDEQKIVQ----VACGWRHTLALTENKNIFSWGR 360



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 150/307 (48%), Gaps = 31/307 (10%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSE 162
           V E  +  +    AG +H+  +       ++G  + GQLG G   +   P+ +    V  
Sbjct: 15  VPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPR 74

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE-YNTKDSSVKLAYEAQPRPR 221
           VT+  CGAD T+  S  E   + + G   +G+LGHG  ++ +N               P+
Sbjct: 75  VTSVICGADHTIAYSDDE-MQLYSWGWGDFGRLGHGNSSDVFN---------------PQ 118

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I AL G  I ++ACG +H + V   G V++WG    G+LG    +D  +P+++  F+  
Sbjct: 119 PIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV 178

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRC 335
            V     +I+AG+ +++    GG LY   WG+  N G    DD   P+ +  + G  +  
Sbjct: 179 CV----KMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL 234

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           +  G  H   V +  +  ++G ++YG+LG+G +  +   +P+K++ L+ + +  ++ G+ 
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDF--QDHLVPRKLEALKDVPISQISGGWR 292

Query: 395 HSLVIVD 401
           H++ + +
Sbjct: 293 HTMAVAE 299



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            A+     ++++ ++ G NH+ A+ S   V +WG G  G+LGH + +D  VP  +  F  
Sbjct: 13  EAVPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDV 72

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLR 334
             V    +VI       + +    QLY W     G+L + N  D   P+P++ L G  ++
Sbjct: 73  PRVT---SVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIK 129

Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G+ H   V  +    SWG  Q G+LG G    + S +P+K+   EG+ V  +A G 
Sbjct: 130 QIACGDSHCLTVTFNGQVHSWGRNQNGQLGLG--NNQDSLLPQKIKAFEGVCVKMIAAGA 187

Query: 394 GHSLVIVD 401
            H+  I +
Sbjct: 188 EHTTAITE 195



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           + V   C   H +A+      ++WGR   GQLGHG+ I R+ P ++  LS
Sbjct: 335 KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
          Length = 2434

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 132/266 (49%), Gaps = 17/266 (6%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCV-AVDVEGR----CYTWGRNERGQLGHGDKIQRDRP 101
           P  +R L    +R V+  C   H V A + +G      YT+GRN+ GQLGH D I R  P
Sbjct: 563 PKIVRSLENRIVRLVS--CSYYHTVMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVP 620

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
             V  +    +     G+ HT+VVT  G + AFG N +GQLG  S+ N++ P  VR  + 
Sbjct: 621 QHVEAMGDQHVVSVACGQYHTMVVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLE 680

Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             E     CG   T+ L S  GA +   G   YGQLG G  N  +T  ++++L  +    
Sbjct: 681 KHECLEIRCGYYHTIVLCS--GAHLFAFGRNDYGQLGLGRANASST--ANLQLQQQRFSY 736

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            R I  L G+ IV+ ACG  HTVAV   G +Y +G   +G+LG  +  +   P  +D F 
Sbjct: 737 ARLIEELEGKDIVRFACGCYHTVAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFPIDDFV 796

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQ 305
              V    A+++AG  ++    GG +
Sbjct: 797 GKRV----ALVAAGFYHTVVLTGGKE 818



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 91/357 (25%), Positives = 157/357 (43%), Gaps = 46/357 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA--GRSHTVVVT 126
           H +A+ V+G+  T G N+ GQ G G   +      + ++    I +  A  G  HT++VT
Sbjct: 477 HTIALTVDGKVLTCGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYNGCEHTILVT 536

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGAS-- 183
            DG +   G+N  GQLG G+  +E  P  VR L + +    +C    TV     +G+   
Sbjct: 537 MDGRAATCGYNYRGQLGHGNTASESVPKIVRSLENRIVRLVSCSYYHTVMACEEDGSGQQ 596

Query: 184 -ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            +   G   YGQLGH      ++ D  V         P+ + A+  + +V VACG  HT+
Sbjct: 597 YLYTFGRNDYGQLGHN-----DSIDRKV---------PQHVEAMGDQHVVSVACGQYHTM 642

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTA 301
            V + G  + +G   YG+LG    +++ VP +V    +++  L     I  G  ++    
Sbjct: 643 VVTATGKAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLE----IRCGYYHTIVLC 698

Query: 302 GGGQLYMWGK------------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
            G  L+ +G+                  L+     + Y + + +L G ++     G  H 
Sbjct: 699 SGAHLFAFGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHT 758

Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              +D+  +  +G   +G+LG G   ++    P  +D   G  V  VA G+ H++V+
Sbjct: 759 VAVSDNGVMYVFGRNNHGQLGTGDTNERVYPFP--IDDFVGKRVALVAAGFYHTVVL 813



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 160/358 (44%), Gaps = 56/358 (15%)

Query: 76  EGRCYTW--GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           EG    W  G+N  G+LGHGD   R     +  L + +I + GAG  HT+ +T DG  L 
Sbjct: 430 EGDREVWSCGQNSYGELGHGDTASRKSFERIESLQQKEIIQIGAGNEHTIALTVDGKVLT 489

Query: 134 FGWNKHGQLGSG---SIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
            G+N +GQ G G    + +  E P      +S+V A   G + T+ L +++G +    G 
Sbjct: 490 CGYNDNGQCGQGGTARVSHLCEMPKMGDNAISQVHAYN-GCEHTI-LVTMDGRAA-TCGY 546

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV-AVDSKG 248
              GQLGHG     NT   SV         P+ + +L    +  V+C   HTV A +  G
Sbjct: 547 NYRGQLGHG-----NTASESV---------PKIVRSLENRIVRLVSCSYYHTVMACEEDG 592

Query: 249 ----YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
               Y+YT+G   YG+LGH +  D  VP+ V+     +V+     ++ G  ++      G
Sbjct: 593 SGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVEAMGDQHVVS----VACGQYHTMVVTATG 648

Query: 305 QLYMWGK--LKNNGDDWMYPK--PLMDLSG------WNLRCMDSGNMHHFVGAD-SSCIS 353
           + + +GK      G D M  +  P+   +G        +RC   G  H  V    +   +
Sbjct: 649 KAFAFGKNDYGQLGIDSMENQLVPVQVRAGLEKHECLEIRC---GYYHTIVLCSGAHLFA 705

Query: 354 WGHAQYGELGYGPYGQKSSA----------MPKKVDILEGMHVISVACGYGHSLVIVD 401
           +G   YG+LG G     S+A            + ++ LEG  ++  ACG  H++ + D
Sbjct: 706 FGRNDYGQLGLGRANASSTANLQLQQQRFSYARLIEELEGKDIVRFACGCYHTVAVSD 763


>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 442

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 154/334 (46%), Gaps = 31/334 (9%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKH 139
           +WGR E GQLGHGD   R  PT+++     ++     G  HT+  ++D   L ++GW   
Sbjct: 44  SWGRGEDGQLGHGDSEDRPVPTVLTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDF 103

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G+  +   P P+  L   ++   ACG      L+      + + G  Q GQLG G
Sbjct: 104 GRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHC--LTVTFNGQVHSWGRNQNGQLGLG 161

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N +DS +         P+ I A  G  +  +A G  HT A+   G +Y WG+G Y
Sbjct: 162 -----NNQDSLL---------PQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRY 207

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----N 314
           G LG  ++ D  VP +V   +   ++    +++ G  +S   +  G LY +G  K     
Sbjct: 208 GNLGLSDRDDRSVPEKVSSVEGEKMV----LVACGWRHSVSVSSSGALYTYGWSKYGQLG 263

Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
           +GD  D + P+ L  L    +  +  G  H   V  D     WG  ++G++G        
Sbjct: 264 HGDFQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHC 323

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           S  P +V+  +   ++ VACG+ H+L + +  N+
Sbjct: 324 S--PVEVNFPDEQKIVQVACGWRHTLALTENKNI 355



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/347 (29%), Positives = 168/347 (48%), Gaps = 48/347 (13%)

Query: 53  LVGVDI-RFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           L   D+ R  +  C + H +A  D E + Y+WG  + G+LGHG+      P  +  L   
Sbjct: 67  LTSFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGM 126

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
           KIK+   G SH + VT +G   ++G N++GQLG G+ ++ + P  ++      V   A G
Sbjct: 127 KIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVKMIAAG 186

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           A+ T  ++  EG  +   G  +YG LG       +  D SV         P  ++++ GE
Sbjct: 187 AEHTTAIT--EGGDLYGWGWGRYGNLGLS-----DRDDRSV---------PEKVSSVEGE 230

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +V VACG  H+V+V S G +YT+G+  YG+LGH + +D  VPR+++  +      P + 
Sbjct: 231 KMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLEALKD----VPISQ 286

Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGD-----DWMYP---KPLMDLSGWNLR 334
           IS G  ++   A  G+LY WG        +++N D     +  +P   K +    GW   
Sbjct: 287 ISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQKIVQVACGWRHT 346

Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
              + N + F        SWG    G+LG+G    +++  PK +D L
Sbjct: 347 LALTENKNIF--------SWGRGASGQLGHGEIIDRNT--PKMIDAL 383



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 23/283 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  +  L G+ I+ +A  C   HC+ V   G+ ++WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIA--CGDSHCLTVTFNGQVHSWGRNQNGQ 157

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +       +K   AG  HT  +TE G+   +GW ++G LG     +
Sbjct: 158 LGLGNNQDSLLPQKIKAFEGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDD 217

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V  +  E +   ACG   +V +SS    ++   G  +YGQLGHG          
Sbjct: 218 RSVPEKVSSVEGEKMVLVACGWRHSVSVSS--SGALYTYGWSKYGQLGHGD--------- 266

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                ++    PR + AL    I +++ G  HT+AV   G +Y WG+  +G++G  +  D
Sbjct: 267 -----FQDHLVPRKLEALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVD 321

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              P  V+      ++     ++ G  ++        ++ WG+
Sbjct: 322 HCSPVEVNFPDEQKIVQ----VACGWRHTLALTENKNIFSWGR 360



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 80/307 (26%), Positives = 150/307 (48%), Gaps = 31/307 (10%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSE 162
           V E  +  +    AG +H+  +       ++G  + GQLG G   +   P+ +    V  
Sbjct: 15  VPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDVPR 74

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE-YNTKDSSVKLAYEAQPRPR 221
           VT+  CGAD T+  S  E   + + G   +G+LGHG  ++ +N               P+
Sbjct: 75  VTSVICGADHTIAYSDDE-MQLYSWGWGDFGRLGHGNSSDVFN---------------PQ 118

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I AL G  I ++ACG +H + V   G V++WG    G+LG    +D  +P+++  F+  
Sbjct: 119 PIVALQGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV 178

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRC 335
            V     +I+AG+ +++    GG LY   WG+  N G    DD   P+ +  + G  +  
Sbjct: 179 CV----KMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVL 234

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           +  G  H   V +  +  ++G ++YG+LG+G +  +   +P+K++ L+ + +  ++ G+ 
Sbjct: 235 VACGWRHSVSVSSSGALYTYGWSKYGQLGHGDF--QDHLVPRKLEALKDVPISQISGGWR 292

Query: 395 HSLVIVD 401
           H++ + +
Sbjct: 293 HTMAVAE 299



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 90/188 (47%), Gaps = 12/188 (6%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            A+     ++++ ++ G NH+ A+ S   V +WG G  G+LGH + +D  VP  +  F  
Sbjct: 13  EAVPEAPEQSVILISAGANHSAALLSGQMVCSWGRGEDGQLGHGDSEDRPVPTVLTSFDV 72

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLR 334
             V    +VI       + +    QLY W     G+L + N  D   P+P++ L G  ++
Sbjct: 73  PRVT---SVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNPQPIVALQGMKIK 129

Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G+ H   V  +    SWG  Q G+LG G    + S +P+K+   EG+ V  +A G 
Sbjct: 130 QIACGDSHCLTVTFNGQVHSWGRNQNGQLGLG--NNQDSLLPQKIKAFEGVCVKMIAAGA 187

Query: 394 GHSLVIVD 401
            H+  I +
Sbjct: 188 EHTTAITE 195



 Score = 42.0 bits (97), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           + V   C   H +A+      ++WGR   GQLGHG+ I R+ P ++  LS
Sbjct: 335 KIVQVACGWRHTLALTENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALS 384


>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
          Length = 1060

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 130/262 (49%), Gaps = 23/262 (8%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVS-PTRLRPLVGVDIRFVA 62
           L+A    +  T     G++   GS   + +GR  G +D    S P  +R L   D + V 
Sbjct: 97  LQASSGTKHSTVLTDAGQVFTWGSNEDNQLGR--GQVDSASTSIPRMVRGLA--DHKVVQ 152

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
             C S H V +   G+ YTWG N  GQLG  +K  ++ P  VS +S   I +  AG  H 
Sbjct: 153 VACGSAHTVGLTATGQIYTWGSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHN 212

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
           +V+T  G   A+G N  GQLG G  ++   P+ V+ L ++ + A ACG D ++ L+   G
Sbjct: 213 LVLTISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGG 272

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
                AG+  YGQLGH T N               +  PR +  L G ++ ++ACG  H+
Sbjct: 273 VFTFGAGM--YGQLGHNTSNN--------------ELLPRKVFELMGSSVTQIACGRKHS 316

Query: 242 VA-VDSKGYVYTWGFGGYGRLG 262
           +A V S G VY +G GG G+LG
Sbjct: 317 IAYVPSSGRVYVFGLGGNGQLG 338



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 121/262 (46%), Gaps = 26/262 (9%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           +K G +L CG+  +  +G  K      L+     R         + A   + H   +   
Sbjct: 60  KKDGRVLSCGNNDYGQLGHEKPCKRPALIDSLGER-------NVLQASSGTKHSTVLTDA 112

Query: 77  GRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           G+ +TWG NE  QLG G  D      P +V  L+ +K+ +   G +HTV +T  G    +
Sbjct: 113 GQVFTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTATGQIYTW 172

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G N HGQLG  +   + EP  V C+    +   A GAD  + L+ + GA +   G   +G
Sbjct: 173 GSNNHGQLGLANKTPQNEPQWVSCISGLPIVRVAAGADHNLVLT-ISGA-LFAWGCNSFG 230

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG G D +                 P  +  L  + I  +ACG +H++A+   G V+T+
Sbjct: 231 QLGVGDDQDRGA--------------PTLVKTLRNQGICALACGDDHSLALTRDGGVFTF 276

Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
           G G YG+LGH    +E +PR+V
Sbjct: 277 GAGMYGQLGHNTSNNELLPRKV 298



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 165/375 (44%), Gaps = 40/375 (10%)

Query: 29  CWDAVGRRKGALDG----NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
           CW ++   +  L G     +  P  +R    V++  +A G    H + V  +GR  + G 
Sbjct: 13  CWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVHIACGLQ--HTLFVKKDGRVLSCGN 70

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
           N+ GQLGH    +  RP ++  L +  + +A +G  H+ V+T+ G    +G N+  QLG 
Sbjct: 71  NDYGQLGHEKPCK--RPALIDSLGERNVLQASSGTKHSTVLTDAGQVFTWGSNEDNQLGR 128

Query: 145 GSIRNEIEPSP--VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           G + +     P  VR L   +V   ACG+  TV L++     I   G   +GQLG     
Sbjct: 129 GQVDSASTSIPRMVRGLADHKVVQVACGSAHTVGLTAT--GQIYTWGSNNHGQLGLANKT 186

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
             N               P+ ++ ++G  IV+VA G +H + +   G ++ WG   +G+L
Sbjct: 187 PQN--------------EPQWVSCISGLPIVRVAAGADHNLVLTISGALFAWGCNSFGQL 232

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKL-KNN 315
           G  + +D   P  V   +   +      ++ G  +S      G ++     M+G+L  N 
Sbjct: 233 GVGDDQDRGAPTLVKTLRNQGI----CALACGDDHSLALTRDGGVFTFGAGMYGQLGHNT 288

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGP-YGQKSS 372
            ++ + P+ + +L G ++  +  G  H   +V +      +G    G+LG G    + S 
Sbjct: 289 SNNELLPRKVFELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSP 348

Query: 373 AMPKKVDILEGMHVI 387
           AM K   +  G  V+
Sbjct: 349 AMVKGPFVAFGAEVV 363



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 149/338 (44%), Gaps = 34/338 (10%)

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY---KIKKAGAGRSHTVVVTEDGN 130
           D++     WG    GQLG G  ++ +  T+  E+  +   ++     G  HT+ V +DG 
Sbjct: 6   DLKSSVLCWGSLTHGQLGLGG-LEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGR 64

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGL 189
            L+ G N +GQLG    +    P+ +  L    V   + G   +  L+  +   +   G 
Sbjct: 65  VLSCGNNDYGQLGHE--KPCKRPALIDSLGERNVLQASSGTKHSTVLT--DAGQVFTWGS 120

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
            +  QLG G   + ++  +S+         PR +  LA   +V+VACG+ HTV + + G 
Sbjct: 121 NEDNQLGRG---QVDSASTSI---------PRMVRGLADHKVVQVACGSAHTVGLTATGQ 168

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           +YTWG   +G+LG   +  +  P+ V          P   ++AG+ ++      G L+ W
Sbjct: 169 IYTWGSNNHGQLGLANKTPQNEPQWVSCISG----LPIVRVAAGADHNLVLTISGALFAW 224

Query: 310 -----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
                G+L    D D   P  +  L    +  +  G+ H   +  D    ++G   YG+L
Sbjct: 225 GCNSFGQLGVGDDQDRGAPTLVKTLRNQGICALACGDDHSLALTRDGGVFTFGAGMYGQL 284

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+      +  +P+KV  L G  V  +ACG  HS+  V
Sbjct: 285 GHN--TSNNELLPRKVFELMGSSVTQIACGRKHSIAYV 320



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 15/166 (9%)

Query: 241 TVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
           T   D K  V  WG   +G+LG    E++   +PR +  F    V+     I+ G  ++ 
Sbjct: 2   TETADLKSSVLCWGSLTHGQLGLGGLEEETVTLPREIRSFCNVEVVH----IACGLQHTL 57

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKP-----LMD-LSGWNLRCMDSGNMHHFVGADS-SC 351
                G++   G   N+     + KP     L+D L   N+    SG  H  V  D+   
Sbjct: 58  FVKKDGRVLSCG--NNDYGQLGHEKPCKRPALIDSLGERNVLQASSGTKHSTVLTDAGQV 115

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            +WG  +  +LG G     S+++P+ V  L    V+ VACG  H++
Sbjct: 116 FTWGSNEDNQLGRGQVDSASTSIPRMVRGLADHKVVQVACGSAHTV 161


>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
            [Dictyostelium fasciculatum]
          Length = 2003

 Score =  126 bits (317), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 100/362 (27%), Positives = 158/362 (43%), Gaps = 51/362 (14%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P R+  L    I  ++ G    H V +D     Y+WG  + GQLGHG     + P  + 
Sbjct: 1238 TPMRVESLKQTPIMMMSLG--GEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIE 1295

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--- 162
            E +  KI     G  HT+V+   G+  AFG N+HGQLG   +++ + P P R   ++   
Sbjct: 1296 EFAGQKISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHL-PIPTRVNTADIHH 1354

Query: 163  ------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
                  VT   CG   +V  +S     + + G    GQLGHG+               E+
Sbjct: 1355 AGQPTRVTGIFCGHSHSVLRTS--HGDVYSFGANAKGQLGHGST--------------ES 1398

Query: 217  QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
               P+ I  L G+ I ++ CG  HTV       VY WG G +  LG    K+E VP+ V+
Sbjct: 1399 CRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLVE 1458

Query: 277  VFQRNNVLPPEAVISAGSVNSSCTA------GGGQLYMW-----GKLKNNGD------DW 319
            +F    V   E V+      ++ T        GG +Y+      GKL   GD      D 
Sbjct: 1459 LFVNKRV---ERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSLDK 1515

Query: 320  MYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
             YP  +  ++  N+  + SG   +  + ++ +   WG   +G++G G    + + +P +V
Sbjct: 1516 AYPAIIPSINSANVVDLASGAEFNALITSNGALYMWGAGTHGQIGNGK--NQDTWIPTRV 1573

Query: 379  DI 380
             +
Sbjct: 1574 SL 1575



 Score =  113 bits (282), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 82/274 (29%), Positives = 123/274 (44%), Gaps = 21/274 (7%)

Query: 19   GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPL----VGVDIRFVAAGCVSCHCVAVD 74
            GG+L   GS     +G     L  +L  PTR+        G   R     C   H V   
Sbjct: 1318 GGDLFAFGSNEHGQLGLND--LKHHLPIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRT 1375

Query: 75   VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
              G  Y++G N +GQLGHG       P ++  L    IK+   G  HTVV T+  +   +
Sbjct: 1376 SHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSVYCW 1435

Query: 135  GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS-----SVEGASILNAG 188
            G  +H  LG+GS +NE+ P  V   V++ V    CG   T  L+     S  G ++   G
Sbjct: 1436 GQGEHMCLGTGSNKNELVPKLVELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICG 1495

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              ++G+LG G D     +  S+  AY     P  I ++    +V +A G      + S G
Sbjct: 1496 SSEHGKLGIGGD----PRSPSLDKAY-----PAIIPSINSANVVDLASGAEFNALITSNG 1546

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
             +Y WG G +G++G+ + +D W+P RV +    N
Sbjct: 1547 ALYMWGAGTHGQIGNGKNQDTWIPTRVSLSSEKN 1580



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 81/297 (27%), Positives = 126/297 (42%), Gaps = 31/297 (10%)

Query: 113  KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACG 169
            K    G  H  V+T DG    +G N  GQLG G    + + +P+R      + +   + G
Sbjct: 1197 KSVSCGWEHAAVITVDGELFTWGNNTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMMSLG 1256

Query: 170  ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             + TV +       I + G  +YGQLGHG    +N               P+ I   AG+
Sbjct: 1257 GEHTVVID--RSFHIYSWGNGKYGQLGHGVSTPHNL--------------PKRIEEFAGQ 1300

Query: 230  TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEA 288
             I  +A G  HT+ + S G ++ +G   +G+LG  + K    +P RV+    ++   P  
Sbjct: 1301 KISSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHHAGQPTR 1360

Query: 289  V--ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGN 340
            V  I  G  +S      G +Y +G          + +   YPK +  L G N++ +  G 
Sbjct: 1361 VTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHGSTESCRYPKLIQGLKGKNIKRITCGP 1420

Query: 341  MHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             H  V  D  S   WG  ++  LG G    K+  +PK V++     V  V CG  H+
Sbjct: 1421 YHTVVTTDLDSVYCWGQGEHMCLGTG--SNKNELVPKLVELFVNKRVERVVCGLYHT 1475



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 68/279 (24%), Positives = 118/279 (42%), Gaps = 53/279 (18%)

Query: 151  IEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            + P P +R       + +CG +    ++ V+G  +   G    GQLGHG           
Sbjct: 1183 VHPMPALRFNEKHAKSVSCGWEHAAVIT-VDG-ELFTWGNNTSGQLGHGL---------- 1230

Query: 210  VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
               A + Q  P  + +L    I+ ++ G  HTV +D   ++Y+WG G YG+LGH      
Sbjct: 1231 --AAGKHQSTPMRVESLKQTPIMMMSLGGEHTVVIDRSFHIYSWGNGKYGQLGHGVSTPH 1288

Query: 270  WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKP 324
             +P+R++ F    +    + I+ G  ++     GG L+ +G     +L  N      P P
Sbjct: 1289 NLPKRIEEFAGQKI----SSIATGYWHTLVLRSGGDLFAFGSNEHGQLGLNDLKHHLPIP 1344

Query: 325  LMDLSGWNLRCMDSGNMHH----------FVGADSSCI--------SWGHAQYGELGYGP 366
                       +++ ++HH          F G   S +        S+G    G+LG+G 
Sbjct: 1345 TR---------VNTADIHHAGQPTRVTGIFCGHSHSVLRTSHGDVYSFGANAKGQLGHG- 1394

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               +S   PK +  L+G ++  + CG  H++V  D  +V
Sbjct: 1395 -STESCRYPKLIQGLKGKNIKRITCGPYHTVVTTDLDSV 1432


>gi|164657209|ref|XP_001729731.1| hypothetical protein MGL_3275 [Malassezia globosa CBS 7966]
 gi|159103624|gb|EDP42517.1| hypothetical protein MGL_3275 [Malassezia globosa CBS 7966]
          Length = 504

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 181/425 (42%), Gaps = 39/425 (9%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
           G    G ++ CG    D  G         L +P  LR +  V  R V + C S H V + 
Sbjct: 3   GTAPWGRVVLCGRVAADEAGNEVVNAGDCLYAPHILRSVCHVRTRAVVSSCTSDHAVILS 62

Query: 75  VEGRCYTWGRNERGQLG---------------HGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           V G  Y +GRN   Q G                  ++ ++   +        I     G 
Sbjct: 63  VHGDAYLYGRNAEAQCGVPVTSTSDAASLWLYDARRLDKEHDFVPPIAPGVSIHTGATGA 122

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
            HT++VT  G   A G N+ GQ G G++   + P  +  +   V   ACG   +V ++  
Sbjct: 123 MHTLLVTTQGELYAAGSNEFGQCGLGTLATCV-PFQLVPMTERVVDVACGRAASVVVT-- 179

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           E  ++   G  + G LG    + ++T  S V   Y+    P  I  L G  IV+V CG  
Sbjct: 180 ESGAVYTMGSSEDGMLGTCAASWHHTGPSDVT--YDLARHPVRIPNLGG--IVRVTCGER 235

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H  A+D  GY+Y WG     RLG   Q D+  P R+  F R N       + AG+  + C
Sbjct: 236 HVAALDRDGYMYVWGHASLARLGCGTQIDQPFPVRIPQFVRKNKQDRIRDVVAGTTCTMC 295

Query: 300 TAGGGQLYMWG--KLKNNG---DDWMYPKPLMDLSGWNLRCMDSG--NMHHFVGA----- 347
                +L++ G  +LK++G     ++  KPL +L+ +++  M +G   M   V       
Sbjct: 296 VDNQERLWIAGTWRLKDDGGPDQSFLIYKPLAELADYDVHEMAAGADTMQCLVKPTDEHG 355

Query: 348 DSSCISWG---HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           ++   +WG    A + ELG    G  ++ +P  + ILE + V++VA G   S  +V   +
Sbjct: 356 NTHMQAWGWGEGAWHAELGSS--GGTTAPVPTMLHILEPLKVVAVASGRHTSYWLVQPDS 413

Query: 405 VGERL 409
           V   L
Sbjct: 414 VYAEL 418


>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 437

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 106/358 (29%), Positives = 164/358 (45%), Gaps = 36/358 (10%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT +S L    I     
Sbjct: 16  VLLVSAG--ASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTC 73

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT+  +E G  + ++GW   G+LG G   + + P P++ L    +   ACG      
Sbjct: 74  GADHTMARSESGRDVYSWGWGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIACGDSHC-- 131

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+    + +L+ G  Q G+LG GT      +DS +         P+ I       I  VA
Sbjct: 132 LAVTMDSQVLSWGRNQNGELGLGT-----AEDSLL---------PQKIQIFEEIPIKMVA 177

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H+VA+   G +Y WG+G YG LG  ++ D  +P +V V          A+++ G  
Sbjct: 178 AGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVTVDGDK-----MAMVACGWR 232

Query: 296 NSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           ++ C +  G LY   WGK    G    +D + P+ +  LS        SG   H +   S
Sbjct: 233 HTICVSSSGGLYTNGWGKYGQLGHGDFEDHLVPRKVQALSD-KFISQVSGGWRHSMALTS 291

Query: 350 S--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           S   + WG  ++G++G G         P +V+      V  ++CG+ H++ + +R NV
Sbjct: 292 SGQLLGWGWNKFGQIGVG--NNFDCCSPMQVNFPHDQKVQMISCGWRHTIAVTERENV 347



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 22/285 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L+ P  ++ L G+ I+ +A  C   HC+AV ++ +  +WGRN+ G+
Sbjct: 93  WGDFGRLGHGDHSDLLIPHPIKALQGLMIQQIA--CGDSHCLAVTMDSQVLSWGRNQNGE 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +    +  IK   AG  H+V +T+DGN   +GW ++G LG G   +
Sbjct: 151 LGLGTAEDSLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRND 210

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            + P  V     ++   ACG   T+ +SS  G  +   G  +YGQLGHG           
Sbjct: 211 RLLPEKVTVDGDKMAMVACGWRHTICVSSSGG--LYTNGWGKYGQLGHGD---------- 258

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
               +E    PR + AL+ + I +V+ G  H++A+ S G +  WG+  +G++G     D 
Sbjct: 259 ----FEDHLVPRKVQALSDKFISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDC 314

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
             P +V+      V     +IS G  ++        +Y WG+  N
Sbjct: 315 CSPMQVNFPHDQKV----QMISCGWRHTIAVTERENVYSWGRGAN 355



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/298 (27%), Positives = 138/298 (46%), Gaps = 30/298 (10%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
           ++    AG SH+V +       ++G  + GQLG G   + + P+ +  L   ++    CG
Sbjct: 15  RVLLVSAGASHSVALLSGNVVCSWGRGEDGQLGHGDTDDRLFPTKLSALDGQDIICVTCG 74

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD T+   S  G  + + G   +G+LGHG        D S  L       P  I AL G 
Sbjct: 75  ADHTM-ARSESGRDVYSWGWGDFGRLGHG--------DHSDLLI------PHPIKALQGL 119

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV     V +WG    G LG    +D  +P+++ +F+      P  +
Sbjct: 120 MIQQIACGDSHCLAVTMDSQVLSWGRNQNGELGLGTAEDSLLPQKIQIFEE----IPIKM 175

Query: 290 ISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++AG+ +S      G LY   WG+  N G    +D + P+ +  + G  +  +  G  H 
Sbjct: 176 VAAGAEHSVAITKDGNLYGWGWGRYGNLGLGDRNDRLLPEKVT-VDGDKMAMVACGWRHT 234

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             V +     + G  +YG+LG+G +  +   +P+KV  L    +  V+ G+ HS+ + 
Sbjct: 235 ICVSSSGGLYTNGWGKYGQLGHGDF--EDHLVPRKVQALSDKFISQVSGGWRHSMALT 290



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 3/46 (6%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           +SC   H +AV      Y+WGR   GQLG+G+ I R+ PTI+   S
Sbjct: 331 ISCGWRHTIAVTERENVYSWGRGANGQLGNGETIDRNVPTIIEAFS 376


>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 513

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 150/342 (43%), Gaps = 58/342 (16%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C S H V +  +G  YTWGR + G+LGHGD   +  P IV  L   +I +A  G  
Sbjct: 43  VQVACGSGHTVVLSEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSY 102

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLS 177
           HT  VT+ G    +G   +G+LG G+      P  V+ L  E   VT  ACG+  TV L+
Sbjct: 103 HTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIACGSRHTVVLT 162

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +    +   G  + G +GH   + +             Q  PR + +L  +T+ +VA  
Sbjct: 163 DL--GKVYTWGDKENGVVGHTNADGH-------------QYLPRMLESLQAKTVTQVAAC 207

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
             HT A+ + G ++TWG G +GRLGH  ++++ VPR V+      V      ++ G  +S
Sbjct: 208 GFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMVPRMVEALMGKRV----GHVACGGFHS 263

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
           +     G+LY WG                                   G      ++G+ 
Sbjct: 264 AAILDSGELYTWGG----------------------------------GEHGQVYTFGNG 289

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +G+LG+G    +  ++P  V  L  MHV+ VA    H+  +
Sbjct: 290 DHGKLGHGDV--RKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/281 (32%), Positives = 132/281 (46%), Gaps = 31/281 (11%)

Query: 132 LAFGWNK--HGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG 188
           L + W +   GQLG G   ++  P  V  L S+ V   ACG+  TV LS  E  ++   G
Sbjct: 8   LVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSKGVVQVACGSGHTVVLS--EDGAVYTWG 65

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               G+LGHG DN +             +  PR + AL G+ IV+  CG+ HT AV  KG
Sbjct: 66  RGDDGRLGHG-DNGW-------------KYVPRIVEALEGQRIVQATCGSYHTAAVTDKG 111

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YG+LGH  +     P  V   +       +  I+ GS ++      G++Y 
Sbjct: 112 ELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQ--IACGSRHTVVLTDLGKVYT 169

Query: 309 WGKLKN------NGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
           WG  +N      N D   Y P+ L  L    +  + +   H   + A     +WG  ++G
Sbjct: 170 WGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTAALTAAGEIFTWGEGKFG 229

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            LG+G   +++  +P+ V+ L G  V  VACG  HS  I+D
Sbjct: 230 RLGHGM--ERNQMVPRMVEALMGKRVGHVACGGFHSAAILD 268



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/231 (29%), Positives = 104/231 (45%), Gaps = 29/231 (12%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK--YKIKKAG 116
           R V A C S H  AV  +G  YTWG    G+LGHG++     P +V  L     ++ +  
Sbjct: 93  RIVQATCGSYHTAAVTDKGELYTWGGGMYGKLGHGNESGHPTPCMVKHLRDEGARVTQIA 152

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
            G  HTVV+T+ G    +G  ++G +G + +  ++  P  +  L ++         F   
Sbjct: 153 CGSRHTVVLTDLGKVYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACGFHTA 212

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             +  G  I   G  ++G+LGHG +                Q  PR + AL G+ +  VA
Sbjct: 213 ALTAAG-EIFTWGEGKFGRLGHGMERN--------------QMVPRMVEALMGKRVGHVA 257

Query: 236 CGTNHTVAVDSKGYVYTWG---------FGG--YGRLGHREQKDEWVPRRV 275
           CG  H+ A+   G +YTWG         FG   +G+LGH + +   VP  V
Sbjct: 258 CGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLV 308



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 54/131 (41%), Gaps = 13/131 (9%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           DG+   P  L  L    +  VAA     H  A+   G  +TWG  + G+LGHG +  +  
Sbjct: 184 DGHQYLPRMLESLQAKTVTQVAA--CGFHTAALTAAGEIFTWGEGKFGRLGHGMERNQMV 241

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVT-----------EDGNSLAFGWNKHGQLGSGSIRN 149
           P +V  L   ++     G  H+  +            E G    FG   HG+LG G +R 
Sbjct: 242 PRMVEALMGKRVGHVACGGFHSAAILDSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRK 301

Query: 150 EIEPSPVRCLV 160
              P+ V  LV
Sbjct: 302 VSVPTLVAGLV 312



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 13/103 (12%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG----- 88
           GR    ++ N + P  +  L+G  +  VA  C   H  A+   G  YTWG  E G     
Sbjct: 229 GRLGHGMERNQMVPRMVEALMGKRVGHVA--CGGFHSAAILDSGELYTWGGGEHGQVYTF 286

Query: 89  ------QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
                 +LGHGD  +   PT+V+ L K  + K  +   HT  +
Sbjct: 287 GNGDHGKLGHGDVRKVSVPTLVAGLVKMHVVKVASYNEHTAAL 329



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 51/155 (32%)

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY+WG G  G+LG  +  D+  P  VD           A+ S G V  +C +G   + 
Sbjct: 7   GLVYSWGRGEDGQLGLGDTNDQDRPVLVD-----------ALKSKGVVQVACGSGHTVV- 54

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPY 367
                                                +  D +  +WG    G LG+G  
Sbjct: 55  -------------------------------------LSEDGAVYTWGRGDDGRLGHGDN 77

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           G K   +P+ V+ LEG  ++   CG  H+  + D+
Sbjct: 78  GWKY--VPRIVEALEGQRIVQATCGSYHTAAVTDK 110


>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
 gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
          Length = 430

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 24/284 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  ++ L G++IR +A  C   HC+AV  +G  Y+WGRN+ GQ
Sbjct: 84  WGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA--CGDSHCLAVTADGEVYSWGRNQNGQ 141

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +       +K   AG  HT  VT+ G    +GW ++G LG G   +
Sbjct: 142 LGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGD 201

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P+ V  +  E +   ACG   T+ +S  +   +   G  +YGQLGHG          
Sbjct: 202 RMLPAEVPAVGDEKMCMVACGWRHTIAVS--QSGKLYTYGWSKYGQLGHGD--------- 250

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                Y     P  +AALA   I +V+ G  HTVA+   G +Y WG+  +G++G  +  D
Sbjct: 251 -----YADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDD 305

Query: 269 EWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              P+ + +  Q   V+     +S G  ++        +Y WG+
Sbjct: 306 HTSPQLISIPGQHQRVVQ----VSCGWRHTVAVTDKNNVYSWGR 345



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 168/359 (46%), Gaps = 36/359 (10%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       ++GR E GQLGHGD   R  P I+  L+  +I     
Sbjct: 7   VLLVSAG--ASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVAC 64

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +    ++ ++GW   G+LG G+  +   P P++ L   E+   ACG      
Sbjct: 65  GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHC-- 122

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG G     +T DS V         P  + A  G ++  +A
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLG-----DTDDSLV---------PHKLLAFEGVSVKMLA 168

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  +P  V       +     +++ G  
Sbjct: 169 AGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKM----CMVACGWR 224

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           ++   +  G+LY +G  K     +GD  D + P  +  L+ +N+  +  G  H     ++
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH--VISVACGYGHSLVIVDRTNV 405
             +  WG  ++G++G G     +S  P+ + I  G H  V+ V+CG+ H++ + D+ NV
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTS--PQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNV 340



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 152/346 (43%), Gaps = 36/346 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P  +  L   +I  VA  C + H  A        Y+WG  + G+LGHG+      P  + 
Sbjct: 48  PRIIGALNDCEISLVA--CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK 105

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   +I++   G SH + VT DG   ++G N++GQLG G   + + P  +       V 
Sbjct: 106 ALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK 165

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ T   +  +   +   G  +YG LG G   +              +  P  + 
Sbjct: 166 MLAAGAEHTA--AVTDSGKLYGWGWGRYGNLGLGDRGD--------------RMLPAEVP 209

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           A+  E +  VACG  HT+AV   G +YT+G+  YG+LGH +  D  +P +V      N+ 
Sbjct: 210 AVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNIT 269

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD- 337
                +S G  ++      G+LY WG  K       + DD   P+ L+ + G + R +  
Sbjct: 270 Q----VSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQ-LISIPGQHQRVVQV 324

Query: 338 -SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
             G  H     D + + SWG    G+LG+G    +S+  PK +  L
Sbjct: 325 SCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSA--PKGIQAL 368



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SHTV +       +FG  + GQLG G   + + P  +  L   E++  ACG
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRLLPRIIGALNDCEISLVACG 65

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD T   S+    +I + G   +G+LGHG     N+ D  V         P  I AL G 
Sbjct: 66  ADHTTAYSATR-LTIYSWGWGDFGRLGHG-----NSSDLFV---------PHPIKALQGL 110

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV + G VY+WG    G+LG  +  D  VP ++  F+  +V     +
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSV----KM 166

Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           ++AG+ +++     G+LY WG        L + GD  M P  +  + G    CM +    
Sbjct: 167 LAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDR-MLPAEVPAV-GDEKMCMVACGWR 224

Query: 343 HFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           H +    S    ++G ++YG+LG+G Y      +P +V  L   ++  V+ G+ H++ + 
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADH--LLPHQVAALAEFNITQVSGGWRHTVALT 282

Query: 401 D 401
           +
Sbjct: 283 E 283



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+       +  SP +L  + G   R V   C   H VAV  +   Y+WGR   GQ
Sbjct: 292 WNKFGQVGSGDVDDHTSP-QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQ 350

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           LGHGD + R  P  +  LS       G  +S    VT  G
Sbjct: 351 LGHGDAVDRSAPKGIQALSADGSACEGLEKSPEPAVTGSG 390


>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 393

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 161/369 (43%), Gaps = 48/369 (13%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ--RDRPT 102
           +SP  L    G +I  +  G  + H  A+D EG+ YTWG NE  QLGHG   Q  +  P 
Sbjct: 35  LSPRILETFEGKNIAKLDFG--ATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPR 92

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-----RNEIEPSPVR 157
           +V  L   KI     G  HT  V E+G    +GW      GSG++      +E  P  VR
Sbjct: 93  VVDALRGIKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVR 152

Query: 158 CLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            LV +   V +  CG   TV L+  +   I   G  +YG+LG+G  + +           
Sbjct: 153 TLVDQGVPVKSVECGELHTVALT--KDGEIWAWGNGEYGRLGNGASDNFEV--------- 201

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH------REQKD 268
                P  +   A E I  ++ G + T A+   G VY+WG   + +LG            
Sbjct: 202 -----PEPVEYFADENIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNM 256

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-KLKNNGDDWMYPKPLMD 327
           E +P  V+     NV    A +SAG  +++     G+++MWG KL      W+ P  +  
Sbjct: 257 ETIPVVVEALSNVNV----AQVSAGYDHAAAVTNDGKMFMWGAKL------WLEPHEMTI 306

Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           L    +  +  G  +   + A  +  ++G      LG+G   +K+   P  V+ L   +V
Sbjct: 307 LKDETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGE--RKTQLQPLLVESLNRYNV 364

Query: 387 ISVACGYGH 395
           +S+ CGY H
Sbjct: 365 VSMTCGYSH 373



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 43/299 (14%)

Query: 130 NSLAFGWNK--HGQLGSGS-----IRNEIEPSPVRCLVSEVTATACGADFTVWLSSV--E 180
            S  F W     GQLG GS     IR+  E    R L +         DF    S+   +
Sbjct: 4   QSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDK 63

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              +   G  +Y QLGHG+ N+            + Q  PR + AL G  IV ++CG  H
Sbjct: 64  EGKLYTWGSNEYHQLGHGSSNQ------------DIQSIPRVVDALRGIKIVDISCGEYH 111

Query: 241 TVAVDSKGYVYTWGFG-----GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           T AVD +G ++TWG+G     G G LGH   +DE +PR V       V  P   +  G +
Sbjct: 112 TGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGV--PVKSVECGEL 169

Query: 296 NSSCTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++      G+++ W     G+L N   D++  P+P+   +  N+  + +G    F +   
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENIASISAGRDFTFAITEH 229

Query: 349 SSCISWGHAQYGELGYGP------YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               SWG   + +LG G       Y  ++  +P  V+ L  ++V  V+ GY H+  + +
Sbjct: 230 GEVYSWGINSHSQLGLGGGLTVDYYNMET--IPVVVEALSNVNVAQVSAGYDHAAAVTN 286



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 138/346 (39%), Gaps = 54/346 (15%)

Query: 73  VDVEGRCYTWGRNERGQLGHG--------DKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           +  +   +TWG   +GQLGHG           +   P I+       I K   G +H+  
Sbjct: 1   MSTQSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAA 60

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLVS-EVTATACGADFTVWLSSVEG 181
           + ++G    +G N++ QLG GS   +I+  P  V  L   ++   +CG   T  +   E 
Sbjct: 61  IDKEGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDALRGIKIVDISCGEYHTGAVD--EE 118

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTN 239
             +   G       G G       +D S+         PR +  L   G  +  V CG  
Sbjct: 119 GKLFTWGWGGSTMKGSGALGHAGGEDESI---------PRLVRTLVDQGVPVKSVECGEL 169

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           HTVA+   G ++ WG G YGRLG+    +  VP  V+ F   N+    A ISAG   +  
Sbjct: 170 HTVALTKDGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFADENI----ASISAGRDFTFA 225

Query: 300 TAGGGQLYMWG-----KLKNNGD---DW----MYPKPLMDLSGWNLRCMDSGNMH-HFVG 346
               G++Y WG     +L   G    D+      P  +  LS  N+  + +G  H   V 
Sbjct: 226 ITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEALSNVNVAQVSAGYDHAAAVT 285

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
            D     WG   + E             P ++ IL+   +ISV CG
Sbjct: 286 NDGKMFMWGAKLWLE-------------PHEMTILKDETIISVQCG 318



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/71 (25%), Positives = 35/71 (49%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D   ++  C   +  A+   G  +T+G+     LGHG++  + +P +V  L++Y +    
Sbjct: 309 DETIISVQCGRYYTAALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRYNVVSMT 368

Query: 117 AGRSHTVVVTE 127
            G SH   +T+
Sbjct: 369 CGYSHMGALTK 379


>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
 gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
          Length = 430

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 24/284 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  ++ L G++IR +A  C   HC+AV  +G  Y+WGRN+ GQ
Sbjct: 84  WGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIA--CGDSHCLAVTADGEVYSWGRNQNGQ 141

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG GD      P  +       +K   AG  HT  VT+ G    +GW ++G LG G   +
Sbjct: 142 LGLGDTDDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGD 201

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P+ V  +  E +   ACG   T+ +S  +   +   G  +YGQLGHG          
Sbjct: 202 RMLPAEVPAVGDEKMCMVACGWRHTIAVS--QSGKLYTYGWSKYGQLGHGD--------- 250

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                Y     P  +AALA   I +V+ G  HTVA+   G +Y WG+  +G++G  +  D
Sbjct: 251 -----YADHLLPHQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDD 305

Query: 269 EWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              P+ + +  Q   V+     +S G  ++        +Y WG+
Sbjct: 306 HTSPQLISIPGQHQRVVQ----VSCGWRHTVAVTDKNNVYSWGR 345



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 168/359 (46%), Gaps = 36/359 (10%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       ++GR E GQLGHGD   R  P I+  L+  +I     
Sbjct: 7   VLLVSAG--ASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVAC 64

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +    ++ ++GW   G+LG G+  +   P P++ L   E+   ACG      
Sbjct: 65  GADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIKALQGLEIRQIACGDSHC-- 122

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG G     +T DS V         P  + A  G ++  +A
Sbjct: 123 LAVTADGEVYSWGRNQNGQLGLG-----DTDDSLV---------PHKLLAFEGVSVKMLA 168

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  +P  V       +     +++ G  
Sbjct: 169 AGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAEVPAVGDEKM----CMVACGWR 224

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           ++   +  G+LY +G  K     +GD  D + P  +  L+ +N+  +  G  H     ++
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNITQVSGGWRHTVALTEA 284

Query: 350 SCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH--VISVACGYGHSLVIVDRTNV 405
             +  WG  ++G++G G     +S  P+ + I  G H  V+ V+CG+ H++ + D+ NV
Sbjct: 285 GKLYGWGWNKFGQVGSGDVDDHTS--PQLISI-PGQHQRVVQVSCGWRHTVAVTDKNNV 340



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 36/346 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P  +  L   +I  VA  C + H  A        Y+WG  + G+LGHG+      P  + 
Sbjct: 48  PRIIGALNDCEISLVA--CGADHTTAYSATRLTIYSWGWGDFGRLGHGNSSDLFVPHPIK 105

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   +I++   G SH + VT DG   ++G N++GQLG G   + + P  +       V 
Sbjct: 106 ALQGLEIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSVK 165

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ T   +  +G  +   G  +YG LG G   +              +  P  + 
Sbjct: 166 MLAAGAEHTA--AVTDGGKLYGWGWGRYGNLGLGDRGD--------------RMLPAEVP 209

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           A+  E +  VACG  HT+AV   G +YT+G+  YG+LGH +  D  +P +V      N+ 
Sbjct: 210 AVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEFNIT 269

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD- 337
                +S G  ++      G+LY WG  K       + DD   P+ L+ + G + R +  
Sbjct: 270 Q----VSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQ-LISIPGQHQRVVQV 324

Query: 338 -SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
             G  H     D + + SWG    G+LG+G    +S+  PK +  L
Sbjct: 325 SCGWRHTVAVTDKNNVYSWGRGTSGQLGHGDAVDRSA--PKGIQAL 368



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 145/301 (48%), Gaps = 33/301 (10%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           K+    AG SHTV +       +FG  + GQLG G   +   P  +  L   E++  ACG
Sbjct: 6   KVLLVSAGASHTVALLSGQVVCSFGRGEDGQLGHGDAEDRHLPRIIGALNDCEISLVACG 65

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD T   S+    +I + G   +G+LGHG     N+ D  V         P  I AL G 
Sbjct: 66  ADHTTAYSATR-LTIYSWGWGDFGRLGHG-----NSSDLFV---------PHPIKALQGL 110

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I ++ACG +H +AV + G VY+WG    G+LG  +  D  VP ++  F+  +V     +
Sbjct: 111 EIRQIACGDSHCLAVTADGEVYSWGRNQNGQLGLGDTDDSLVPHKLLAFEGVSV----KM 166

Query: 290 ISAGSVNSSCTAGGGQLYMWG-------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           ++AG+ +++    GG+LY WG        L + GD  M P  +  + G    CM +    
Sbjct: 167 LAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDR-MLPAEVPAV-GDEKMCMVACGWR 224

Query: 343 HFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           H +    S    ++G ++YG+LG+G Y      +P +V  L   ++  V+ G+ H++ + 
Sbjct: 225 HTIAVSQSGKLYTYGWSKYGQLGHGDYADH--LLPHQVAALAEFNITQVSGGWRHTVALT 282

Query: 401 D 401
           +
Sbjct: 283 E 283



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 80/159 (50%), Gaps = 6/159 (3%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           G+ + P  + P VG D +     C   H +AV   G+ YT+G ++ GQLGHGD      P
Sbjct: 200 GDRMLPAEV-PAVG-DEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLP 257

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--L 159
             V+ L+++ I +   G  HTV +TE G    +GWNK GQ+GSG + +   P  +     
Sbjct: 258 HQVAALAEFNITQVSGGWRHTVALTEAGKLYGWGWNKFGQVGSGDVDDHTSPQLISIPGQ 317

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
              V   +CG   TV  +  +  ++ + G    GQLGHG
Sbjct: 318 HQRVVQVSCGWRHTV--AVTDKNNVYSWGRGTSGQLGHG 354



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 1/79 (1%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+       +  SP +L  + G   R V   C   H VAV  +   Y+WGR   GQ
Sbjct: 292 WNKFGQVGSGDVDDHTSP-QLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWGRGTSGQ 350

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LGHGD + R  P  +  LS
Sbjct: 351 LGHGDAVDRSAPKGIQALS 369


>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
            [Strongylocentrotus purpuratus]
          Length = 4064

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 127/266 (47%), Gaps = 19/266 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      H +A+ VEG  Y+WG  E G+LGHG++ Q DRP ++ 
Sbjct: 3256 TPTLLESIQHVHIKKVAVNSGGKHALALSVEGEVYSWGEGEDGKLGHGNRTQCDRPRVIE 3315

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
             L   ++     G +H+  VT  G    +G  ++G+LG G   +++ P     L    V 
Sbjct: 3316 SLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADALKGYRVI 3375

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  L   +  ++ + G   YG+LG G  +                  P+ + 
Sbjct: 3376 DVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PQKVD 3421

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            AL+   + KV CG+  ++A+   G VYTWG G Y RLGH        PR+V   Q   ++
Sbjct: 3422 ALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKII 3481

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWG 310
                 I+ GS++    +  G++Y WG
Sbjct: 3482 S----IATGSLHCVACSDQGEVYTWG 3503



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/339 (28%), Positives = 152/339 (44%), Gaps = 30/339 (8%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT +  L+  +  +   G      VT DG   A G+
Sbjct: 3181 GTIYGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQIVGGEQTLFAVTADGKLYATGY 3240

Query: 137  NKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+ +  +     +  A   G    + L SVEG  + + G  + G
Sbjct: 3241 GASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALAL-SVEG-EVYSWGEGEDG 3298

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG   + +              RPR I +L G+ ++ +ACG  H+  V S G +YTW
Sbjct: 3299 KLGHGNRTQCD--------------RPRVIESLRGKEVIDIACGGAHSACVTSSGELYTW 3344

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+  D  +   V+  +    +G   + C +    ++ W    
Sbjct: 3345 GKGRYGRLGHGDSEDQLRPKMADALKGYRVI--DVACGSGDSQTLCISDDDNVWSWGDGD 3402

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P+ +  LS   +  ++ G+        S C+ +WG   Y  LG+G 
Sbjct: 3403 YGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQFSIALTKSGCVYTWGKGDYHRLGHG- 3461

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                    P+KV  L+G  +IS+A G  H +   D+  V
Sbjct: 3462 -SDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEV 3499



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/336 (30%), Positives = 157/336 (46%), Gaps = 34/336 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG G     D P  V+ LS+Y +KK    +G  H + +T DG 
Sbjct: 2254 VTAEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGK 2313

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G    G+LG  S  N  +P  +  L ++ +   ACG+  +  ++S     +   GL
Sbjct: 2314 VFSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTS--SGELYTWGL 2371

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG        DS+ +L      RP+ + AL G+ +++VACG+    T+ +  +
Sbjct: 2372 GEYGRLGHG--------DSTTQL------RPKLVKALVGKRVIQVACGSRDAQTLTLTDE 2417

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG    +   VP  V+      V+     I  G+  S      GQ++
Sbjct: 2418 GMVYSWGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQ----IECGAQFSLALTKAGQVW 2473

Query: 308  MWGK----LKNNGDDWMYPKPLMD--LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYG 360
             WGK       +G D    KP +   L G  +  +  G +H     D+    +WG   +G
Sbjct: 2474 TWGKGDYFRLGHGTDSHVRKPQVAEGLKGKKIIHVAVGALHCLAVTDTGQVFAWGDNDHG 2533

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            + G G      +  P  V  LEG+ +  VACG  HS
Sbjct: 2534 QQGDG--STTVNKKPALVQGLEGVRITRVACGSSHS 2567



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 109/239 (45%), Gaps = 22/239 (9%)

Query: 51   RPLVGVDIR---FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            RP V   +R    +   C   H   V   G  YTWG+   G+LGHGD   + RP +   L
Sbjct: 3310 RPRVIESLRGKEVIDIACGGAHSACVTSSGELYTWGKGRYGRLGHGDSEDQLRPKMADAL 3369

Query: 108  SKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
              Y++     G+G S T+ +++D N  ++G   +G+LG G       P  V  L S  V 
Sbjct: 3370 KGYRVIDVACGSGDSQTLCISDDDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGVC 3429

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
               CG+ F++ L+  +   +   G   Y +LGHG+D+                 RPR +A
Sbjct: 3430 KVECGSQFSIALT--KSGCVYTWGKGDYHRLGHGSDDHVR--------------RPRKVA 3473

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            AL G+ I+ +A G+ H VA   +G VYTWG    G+LG         PR V   Q   +
Sbjct: 3474 ALQGKKIISIATGSLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKI 3532



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 125/269 (46%), Gaps = 19/269 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N+  P ++  L    ++ VA      H +A+ V+G+ ++WG  + G+LGH  ++  ++P 
Sbjct: 2278 NVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHLSRMNCEKPR 2337

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            ++  L   +I+    G SH+  VT  G    +G  ++G+LG G    ++ P  V+ LV  
Sbjct: 2338 LLEALKTKRIRDIACGSSHSAAVTSSGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGK 2397

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             V   ACG+     L+  +   + + G   +G+LG G                E    P 
Sbjct: 2398 RVIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRG--------------GSEGCSVPH 2443

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             +  L G+ ++++ CG   ++A+   G V+TWG G Y RLGH        P+  +  +  
Sbjct: 2444 NVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFRLGHGTDSHVRKPQVAEGLKGK 2503

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             ++     ++ G+++       GQ++ WG
Sbjct: 2504 KIIH----VAVGALHCLAVTDTGQVFAWG 2528



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 152/338 (44%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ +G
Sbjct: 3228 AVTADGKLYATGYGASGRLGIGGTDSVSTPTLLESIQHVHIKKVAVNSGGKHALALSVEG 3287

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+      P  +  L   EV   ACG   +  ++S     +   G
Sbjct: 3288 EVYSWGEGEDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTS--SGELYTWG 3345

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT--NHTVAVDS 246
              +YG+LGHG        DS      E Q RP+   AL G  ++ VACG+  + T+ +  
Sbjct: 3346 KGRYGRLGHG--------DS------EDQLRPKMADALKGYRVIDVACGSGDSQTLCISD 3391

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP++VD      V      +  GS  S      G +
Sbjct: 3392 DDNVWSWGDGDYGKLGRGGSDGCKVPQKVDALSSIGV----CKVECGSQFSIALTKSGCV 3447

Query: 307  YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            Y WGK     L +  DD +  P+ +  L G  +  + +G++H    +D   + +WG    
Sbjct: 3448 YTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVACSDQGEVYTWGDNDE 3507

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG G     +   P+ V  L+   + +VACG  H++
Sbjct: 3508 GQLGDG--TTNAIQRPRIVTALQDKKITNVACGSAHTV 3543



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 149/344 (43%), Gaps = 34/344 (9%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            +++ + + WG N++ QLG   G KI+   P +   LS  K+     G     VVT +G  
Sbjct: 2203 EIQTKVFVWGLNDKDQLGGPRGSKIK--TPVLNEFLSSLKVVCCAGGSKSLFVVTAEGKV 2260

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG GS +N   P  V  L   V +  A   G    + L +V+G  + + G
Sbjct: 2261 YACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMAL-TVDG-KVFSWG 2318

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                G+LGH              L+     +PR + AL  + I  +ACG++H+ AV S G
Sbjct: 2319 EGDDGKLGH--------------LSRMNCEKPRLLEALKTKRIRDIACGSSHSAAVTSSG 2364

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             +YTWG G YGRLGH +   +  P+ V       V+  +    +    +      G +Y 
Sbjct: 2365 ELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKRVI--QVACGSRDAQTLTLTDEGMVYS 2422

Query: 309  W-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G +    P  +  L+G  +  ++ G         +  + +WG   Y  
Sbjct: 2423 WGDGDFGKLGRGGSEGCSVPHNVERLNGQGVIQIECGAQFSLALTKAGQVWTWGKGDYFR 2482

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G         P+  + L+G  +I VA G  H L + D   V
Sbjct: 2483 LGHGTDSHVRK--PQVAEGLKGKKIIHVAVGALHCLAVTDTGQV 2524



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 65/142 (45%), Gaps = 5/142 (3%)

Query: 65   CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
            C S   +A+   G  YTWG+ +  +LGHG      RP  V+ L   KI     G  H V 
Sbjct: 3433 CGSQFSIALTKSGCVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKKIISIATGSLHCVA 3492

Query: 125  VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
             ++ G    +G N  GQLG G+      P  V  L   ++T  ACG+  TV  S+   + 
Sbjct: 3493 CSDQGEVYTWGDNDEGQLGDGTTNAIQRPRIVTALQDKKITNVACGSAHTVAWST---SK 3549

Query: 184  ILNAG-LPQYGQLGHGTDNEYN 204
             L+AG LPQ   + +    E N
Sbjct: 3550 PLHAGRLPQTVPMEYNLLREVN 3571



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P ++  L G  I  +A G  S HCVA   +G  YTWG N+ GQLG G      R
Sbjct: 3463 DDHVRRPRKVAALQGKKIISIATG--SLHCVACSDQGEVYTWGDNDEGQLGDGTTNAIQR 3520

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P IV+ L   KI     G +HTV
Sbjct: 3521 PRIVTALQDKKITNVACGSAHTV 3543



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 2/83 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P     L G  I  VA G +  HC+AV   G+ + WG N+ GQ G G      +
Sbjct: 2488 DSHVRKPQVAEGLKGKKIIHVAVGAL--HCLAVTDTGQVFAWGDNDHGQQGDGSTTVNKK 2545

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P +V  L   +I +   G SH+ 
Sbjct: 2546 PALVQGLEGVRITRVACGSSHST 2568



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 2/65 (3%)

Query: 217 QPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           Q  P+ ++ L  +  V +A G+N   T+AV   G ++++G G YG+LG        +P+ 
Sbjct: 5   QLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRGGSDGCKLPKL 64

Query: 275 VDVFQ 279
           VD  Q
Sbjct: 65  VDKLQ 69



 Score = 38.9 bits (89), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 5/89 (5%)

Query: 315 NGDDWMYPKPLMDLSGWNLR--CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS 371
           N DD + PK +  L         + S +       D+  + S+G+  YG+LG G  G   
Sbjct: 1   NSDDQLTPKLVSGLKEQKFVHIALGSNDGQTLAVTDTGLLFSFGNGDYGKLGRG--GSDG 58

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +PK VD L+G H +   CG   S+++ 
Sbjct: 59  CKLPKLVDKLQGQHAVIACCGNQFSVILT 87


>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
 gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
           nagariensis]
          Length = 367

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 163/354 (46%), Gaps = 38/354 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
            A  C S H VA+   G   +WGR E GQLGHG   +   P  +S L+   I+    G  
Sbjct: 16  TAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGAE 75

Query: 121 HTVVVTED-GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +T+ V    G   ++GW   G+LG G   +   P P+       V   ACG   T+ ++ 
Sbjct: 76  YTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVACGDTHTLVVAG 135

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
            EG  +   G  Q GQLG G  N+  +              P+ + AL GE +  VACG+
Sbjct: 136 -EG-ELFTFGRNQNGQLGLGHTNDCLS--------------PQLVVALQGERVRSVACGS 179

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H++A    G V++WG+G YG LG  E +D ++P RV   +   ++  E     G  +S+
Sbjct: 180 EHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAE----CGWRHSA 235

Query: 299 CTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS-- 350
             +  G+++ +G  K     +GD  D   P  +  L    +  + +G   H + ADSS  
Sbjct: 236 VVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTRISSV-AGGWRHTMAADSSGN 294

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDI---LEGMHVISVACGYGHSLVIVD 401
              WG  ++G+LG G     SS  P  V +   L G  V  V CG+ H++ + +
Sbjct: 295 LYGWGWNKFGQLGLG----DSSDRPSPVLVGGALAGQRVSLVTCGWRHTVAVTE 344



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 147/332 (44%), Gaps = 34/332 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L    I  V  G      VA    G+ Y+WG  + G+LGHGD      P  +
Sbjct: 54  LAPKAISTLTDAGIESVVCGAEYTIAVAPS-RGQVYSWGWGDFGRLGHGDCNDVFVPRPI 112

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
              S   + +   G +HT+VV  +G    FG N++GQLG G   + + P  V  L  E V
Sbjct: 113 EFFSGRPVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERV 172

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PR 221
            + ACG++ +  L++ E  ++ + G  +YG LG G                E+Q R  P 
Sbjct: 173 RSVACGSEHS--LAATESGTVFSWGWGRYGNLGDG----------------ESQDRYLPT 214

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +  L G  +V   CG  H+  V   G V+T+G+  YG+LGH +  D  VP +V   +  
Sbjct: 215 RVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT 274

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLM---DLSGWNLR 334
            +    + ++ G  ++      G LY WG  K      GD    P P++    L+G  + 
Sbjct: 275 RI----SSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGALAGQRVS 330

Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            +  G  H   V       SWG    G+LG+G
Sbjct: 331 LVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHG 362



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 131/251 (52%), Gaps = 30/251 (11%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           VTA +CG+  +V + S     + + G  + GQLGHG  +E         LA      P+A
Sbjct: 15  VTAVSCGSSHSVAILSC--GIVTSWGRGEDGQLGHGQADEC--------LA------PKA 58

Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           I+ L    I  V CG  +T+AV  S+G VY+WG+G +GRLGH +  D +VPR ++ F   
Sbjct: 59  ISTLTDAGIESVVCGAEYTIAVAPSRGQVYSWGWGDFGRLGHGDCNDVFVPRPIEFFSGR 118

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRC 335
               P   ++ G  ++   AG G+L+ +G+ +N      + +D + P+ ++ L G  +R 
Sbjct: 119 ----PVHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRS 174

Query: 336 MDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           +  G+ H     +S  + SWG  +YG LG G    +   +P +V  LEG+ ++S  CG+ 
Sbjct: 175 VACGSEHSLAATESGTVFSWGWGRYGNLGDGE--SQDRYLPTRVVGLEGIRMVSAECGWR 232

Query: 395 HSLVIVDRTNV 405
           HS V+ +   V
Sbjct: 233 HSAVVSEDGRV 243



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 113/228 (49%), Gaps = 20/228 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           + +SP  +  L G  +R VA  C S H +A    G  ++WG    G LG G+   R  PT
Sbjct: 157 DCLSPQLVVALQGERVRSVA--CGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPT 214

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            V  L   ++  A  G  H+ VV+EDG    FGW+K+GQLG G   +   P  V  L  +
Sbjct: 215 RVVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHT 274

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +++ A G   T  +++    ++   G  ++GQLG G  ++              +P P 
Sbjct: 275 RISSVAGGWRHT--MAADSSGNLYGWGWNKFGQLGLGDSSD--------------RPSPV 318

Query: 222 AI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            +  ALAG+ +  V CG  HTVAV   G VY+WG G  G+LGH  ++D
Sbjct: 319 LVGGALAGQRVSLVTCGWRHTVAVTEGGRVYSWGRGVNGQLGHGAEQD 366



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 22/286 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++  P  +    G  +  VA  C   H + V  EG  +T+GRN+ GQ
Sbjct: 92  WGDFGRLGHGDCNDVFVPRPIEFFSGRPVHRVA--CGDTHTLVVAGEGELFTFGRNQNGQ 149

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P +V  L   +++    G  H++  TE G   ++GW ++G LG G  ++
Sbjct: 150 LGLGHTNDCLSPQLVVALQGERVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQD 209

Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P+ V  L    + +  CG   +  +S  E   +   G  +YGQLGHG     +  D 
Sbjct: 210 RYLPTRVVGLEGIRMVSAECGWRHSAVVS--EDGRVFTFGWSKYGQLGHG-----DHTDR 262

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
           +V         P  +AAL    I  VA G  HT+A DS G +Y WG+  +G+LG  +  D
Sbjct: 263 TV---------PCQVAALRHTRISSVAGGWRHTMAADSSGNLYGWGWNKFGQLGLGDSSD 313

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              P  V        +   ++++ G  ++     GG++Y WG+  N
Sbjct: 314 RPSPVLVGGALAGQRV---SLVTCGWRHTVAVTEGGRVYSWGRGVN 356



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/302 (26%), Positives = 135/302 (44%), Gaps = 29/302 (9%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
           +     G SH+V +   G   ++G  + GQLG G     + P  +  L    + +  CGA
Sbjct: 15  VTAVSCGSSHSVAILSCGIVTSWGRGEDGQLGHGQADECLAPKAISTLTDAGIESVVCGA 74

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           ++T+ ++   G  + + G   +G+LGHG  N+                 PR I   +G  
Sbjct: 75  EYTIAVAPSRG-QVYSWGWGDFGRLGHGDCNDVFV--------------PRPIEFFSGRP 119

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           + +VACG  HT+ V  +G ++T+G    G+LG     D   P+ V   Q   V      +
Sbjct: 120 VHRVACGDTHTLVVAGEGELFTFGRNQNGQLGLGHTNDCLSPQLVVALQGERVRS----V 175

Query: 291 SAGSVNSSCTAGGGQLYM--WGKLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHH- 343
           + GS +S      G ++   WG+  N GD    D   P  ++ L G  +   + G  H  
Sbjct: 176 ACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTRVVGLEGIRMVSAECGWRHSA 235

Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
            V  D    ++G ++YG+LG+G +  ++  +P +V  L    + SVA G+ H++      
Sbjct: 236 VVSEDGRVFTFGWSKYGQLGHGDHTDRT--VPCQVAALRHTRISSVAGGWRHTMAADSSG 293

Query: 404 NV 405
           N+
Sbjct: 294 NL 295


>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 558

 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 162/365 (44%), Gaps = 37/365 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +R   G  +  VAAG    H VA+   G    WGRN  GQLG+G       P  VS 
Sbjct: 78  PIAVRLPTGTTVAAVAAG--DRHSVALTSAGTVLAWGRNTEGQLGNGTTTSSGEPVAVSL 135

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
            S  +I     G  H++ +T  G+ LA+G N  GQLG GS+ +   P  VR    + V A
Sbjct: 136 PSGIRIVAVAVGADHSLALTSTGSLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNTTVAA 195

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G D  + L++   A++L  G  + GQLG GT  + +              RP  +  
Sbjct: 196 IAAGRDHNLVLTATGPAALLAWGANREGQLGDGTVVDRS--------------RPVPVNL 241

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
             G T+  +A G +H++A+ S   V  WG   +G+LG        +P  V       VLP
Sbjct: 242 PTGLTVTAIAGGRDHSLALTSDDTVLAWGGNSHGQLGDGTTTGSLLPVTV-------VLP 294

Query: 286 PEA---VISAGSVNS-SCTAGGGQLY----MWGKLKN-NGDDWMYPKPLMDLSGWNLRCM 336
             A    I+AG ++S + T+ G  L      WG+L N +  D   P  +    G  L  +
Sbjct: 295 VGAEATAIAAGRLHSLALTSDGTALAWGGNHWGQLGNGSTSDSSEPVAVSLPGGTRLISI 354

Query: 337 DSGNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            S +  H V    + + ++WG    G LG G      SA P  V +  G  + S+A G  
Sbjct: 355 ASRDSDHNVAITTEGAALAWGLNSQGHLGDGTT--TDSATPVAVSLPAGAALTSIAVGDD 412

Query: 395 HSLVI 399
           HSL +
Sbjct: 413 HSLAL 417



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 120/282 (42%), Gaps = 38/282 (13%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G N  GQLG G+  +  EP  VR    + V A A G   +V L+S    ++L  G  
Sbjct: 57  LAWGGNDGGQLGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSA--GTVLAWGRN 114

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
             GQLG+GT                    P A++  +G  IV VA G +H++A+ S G +
Sbjct: 115 TEGQLGNGTTTSSG--------------EPVAVSLPSGIRIVAVAVGADHSLALTSTGSL 160

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV----NSSCTAGG-GQ 305
             WG    G+LG         P  V        LPP   ++A +     N   TA G   
Sbjct: 161 LAWGSNDTGQLGDGSVTSSSTPVAVR-------LPPNTTVAAIAAGRDHNLVLTATGPAA 213

Query: 306 LYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           L  WG  +    GD    D   P P+   +G  +  +  G  H   + +D + ++WG   
Sbjct: 214 LLAWGANREGQLGDGTVVDRSRPVPVNLPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNS 273

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +G+LG G      S +P  V +  G    ++A G  HSL + 
Sbjct: 274 HGQLGDGTT--TGSLLPVTVVLPVGAEATAIAAGRLHSLALT 313


>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
            scrofa]
          Length = 4060

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/353 (28%), Positives = 149/353 (42%), Gaps = 67/353 (18%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V I+ VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP ++ 
Sbjct: 3254 TPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIE 3313

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3314 SLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHRVV 3373

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+     L   +  ++ + G   YG+LG G  +                  P  I 
Sbjct: 3374 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKV--------------PMKID 3419

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +L G  +VKV CG+  +VA+   G VYTWG G Y RLGH        PR+V   Q   V+
Sbjct: 3420 SLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 3479

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
                 I+ GS++  C                                   C + G+    
Sbjct: 3480 ----AIATGSLHCVC-----------------------------------CTEDGSY--- 3497

Query: 345  VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                    +WG    G+LG G     +   P+ V  L+G  V  VACG  H+L
Sbjct: 3498 --------TWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKVNRVACGSAHTL 3540



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 134/292 (45%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2236 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 2293

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2294 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2353

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2354 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2413

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2414 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2459

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2460 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWG 2507



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 167/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2198 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 2255

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P
Sbjct: 2256 GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 2315

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG +            
Sbjct: 2316 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHGDNT----------- 2362

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 2363 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 2419

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 2420 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 2475

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 2476 VEGLRGKKIVHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 2533

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 2534 QKITRVACGSSHSV 2547



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 146/329 (44%), Gaps = 30/329 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3179 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADGKLYATGY 3238

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +  +  A   G    + LSS EG  + + G  + G
Sbjct: 3239 GAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3296

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR I +L G  +V VA G  H+  V + G +YTW
Sbjct: 3297 KLGHGNRSPCD--------------RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTW 3342

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ VD  Q + V+  +    +G   + C      ++ W    
Sbjct: 3343 GKGRYGRLGHSDSEDQLKPKLVDALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 3400

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L+G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3401 YGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHG- 3459

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    P++V  L+G  VI++A G  H
Sbjct: 3460 -SDDHVRRPRQVQGLQGKKVIAIATGSLH 3487



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 153/349 (43%), Gaps = 39/349 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            A  +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G
Sbjct: 2179 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 2236

Query: 130  NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
               A G   +G+LG    SG++    + + +   V +  A   G      L +V+G  + 
Sbjct: 2237 KVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATAL-TVDG-KVF 2294

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ 
Sbjct: 2295 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAALT 2340

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    
Sbjct: 2341 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 2396

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG 
Sbjct: 2397 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 2456

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 2457 GDYFRLGHG--SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDAGQV 2503



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 121/287 (42%), Gaps = 38/287 (13%)

Query: 129  GNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G+   +GW  N  GQLG         P+P   L +       G + T++  + +G  +  
Sbjct: 3177 GSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVTADG-KLYA 3235

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAV 244
             G              Y           E+   P  + ++    I KVA   G  H +A+
Sbjct: 3236 TG--------------YGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLAL 3281

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S+G VY+WG    G+LGH  +     PR ++  +   V+     ++AG  +S+C    G
Sbjct: 3282 SSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD----VAAGGAHSACVTAAG 3337

Query: 305  QLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-S 353
             LY WGK +      ++ +D + PK +  L G   R +D    SG+       D   + S
Sbjct: 3338 DLYTWGKGRYGRLGHSDSEDQLKPKLVDALQGH--RVVDVACGSGDAQTLCLTDDDTVWS 3395

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            WG   YG+LG G  G     +P K+D L G+ V+ V CG   S+ + 
Sbjct: 3396 WGDGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVALT 3440



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 103/237 (43%), Gaps = 44/237 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G+++  VAAG    H   V   G  YTWG+   G+LGH D   + +P +V  
Sbjct: 3309 PRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVDA 3366

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  +++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V
Sbjct: 3367 LQGHRVVDVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGV 3426

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN------------------- 204
                CG+ F+V L+  +  ++   G   Y +LGHG+D+                      
Sbjct: 3427 VKVECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 3484

Query: 205  -------TKDSSVKL-----------AYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
                   T+D S                 A  RPR +AAL G+ + +VACG+ HT+A
Sbjct: 3485 SLHCVCCTEDGSYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLA 3541



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 49/244 (20%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2311 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 2368

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2369 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 2428

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV-------KL 212
             + V    CGA F++ L+  +   +   G   Y +LGHG+D   + +   V       K+
Sbjct: 2429 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSD--VHVRKPQVVEGLRGKKI 2484

Query: 213  AYEA---------------------------------QPRPRAIAALAGETIVKVACGTN 239
             + A                                   +P  +  L G+ I +VACG++
Sbjct: 2485 VHVAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSS 2544

Query: 240  HTVA 243
            H+VA
Sbjct: 2545 HSVA 2548



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2467 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 2524

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 2525 PTLVQGLEGQKITRVACGSSHSVAWT 2550



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P +++ L G  +  +A G  S HCV    +G  YTWG N+ GQLG G      R
Sbjct: 3461 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDG-SYTWGDNDEGQLGDGTTNAIQR 3517

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P +V+ L   K+ +   G +HT+
Sbjct: 3518 PRLVAALQGKKVNRVACGSAHTL 3540



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 18/184 (9%)

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            +G  I K A        + +K  V+ WG     +LG  +     VP   +     NV+  
Sbjct: 2165 SGSLIRKKATSLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQ- 2221

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--CMD 337
               ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   + 
Sbjct: 2222 ---VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVH 2278

Query: 338  SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  HS
Sbjct: 2279 SGGRHATALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSSHS 2336

Query: 397  LVIV 400
              + 
Sbjct: 2337 AALT 2340



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 15/165 (9%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3172 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPVQLIGGEQTLFAVT 3228

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    ++   ++SG  H   + ++   
Sbjct: 3229 A-DGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEV 3287

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             SWG A+ G+LG+G   +     P+ ++ L G+ V+ VA G  HS
Sbjct: 3288 YSWGEAEDGKLGHG--NRSPCDRPRVIESLRGIEVVDVAAGGAHS 3330


>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 420

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 161/358 (44%), Gaps = 35/358 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R ++    + H VA+       +WGR E GQLGHGD  +R  P ++S L   +I     G
Sbjct: 15  RVISVSAGASHTVALLSGDLVCSWGRGEDGQLGHGDAEERHLPLVISALDDCEISSITCG 74

Query: 119 RSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
             HT   +E   ++ ++GW   G+LG G+  +   P  ++ L   E+   ACG      L
Sbjct: 75  ADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIACGDSHC--L 132

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +      + + G  Q GQLG G     +T+D  V         P  +AA  G  +  +A 
Sbjct: 133 AITGDGEVHSWGRNQNGQLGLG-----HTEDVLV---------PNKVAAFEGIAVKMLAA 178

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA--VISAGS 294
           G  HT AV   G +Y WG+G YG LG  ++ D  VP  V        +P E   +++ G 
Sbjct: 179 GAEHTAAVTESGKLYGWGWGRYGNLGLGDRNDRLVPGEV------AAVPGEKMNLVACGW 232

Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
            ++   A  G LY +G  K     +GD  D + P  +  L    ++ +  G  H   +  
Sbjct: 233 RHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTIQAVSGGWRHTVALDE 292

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           D     WG  ++G++G G     +S  PK +  +    V  V CG+ H++ I DR NV
Sbjct: 293 DGELYGWGWNKFGQVGCGNTDDHNS--PKLITGIVNEKVTRVTCGWRHTVAITDRGNV 348



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/293 (27%), Positives = 129/293 (44%), Gaps = 43/293 (14%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  ++ L G++I+ +A  C   HC+A+  +G  ++WGRN+ GQ
Sbjct: 93  WGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQIA--CGDSHCLAITGDGEVHSWGRNQNGQ 150

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  V+      +K   AG  HT  VTE G    +GW ++G LG G   +
Sbjct: 151 LGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTAAVTESGKLYGWGWGRYGNLGLGDRND 210

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY----- 203
            + P  V  +  E +   ACG   T+  +     ++   G  +YGQLGHG   ++     
Sbjct: 211 RLVPGEVAAVPGEKMNLVACGWRHTI--AVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQ 268

Query: 204 --NTKDSSVKLA-------------------------------YEAQPRPRAIAALAGET 230
               K+ +++                                  +    P+ I  +  E 
Sbjct: 269 VQALKNKTIQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEK 328

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           + +V CG  HTVA+  +G VY+WG G  G+LGH +  D  VP+R+++   + +
Sbjct: 329 VTRVTCGWRHTVAITDRGNVYSWGRGTSGQLGHGDAVDRCVPKRIELLSADGL 381



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 152/334 (45%), Gaps = 31/334 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRC-YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           D    +  C + H  A     R  Y+WG  + G+LGHG+      P  +  L   +IK+ 
Sbjct: 65  DCEISSITCGADHTTARSESTRTVYSWGWGDFGRLGHGNSSDLFIPRAIKGLKGLEIKQI 124

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
             G SH + +T DG   ++G N++GQLG G   + + P+ V       V   A GA+ T 
Sbjct: 125 ACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTEDVLVPNKVAAFEGIAVKMLAAGAEHTA 184

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
             +  E   +   G  +YG LG G  N+              +  P  +AA+ GE +  V
Sbjct: 185 --AVTESGKLYGWGWGRYGNLGLGDRND--------------RLVPGEVAAVPGEKMNLV 228

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG  HT+AV + G +YT+G+  YG+LGH + +D  VP +V   +   +      +S G 
Sbjct: 229 ACGWRHTIAVANSGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALKNKTI----QAVSGGW 284

Query: 295 VNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
            ++      G+LY WG  K       N DD   PK +  +    +  +  G  H     D
Sbjct: 285 RHTVALDEDGELYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEKVTRVTCGWRHTVAITD 344

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
              + SWG    G+LG+G    +   +PK++++L
Sbjct: 345 RGNVYSWGRGTSGQLGHGDAVDR--CVPKRIELL 376


>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 448

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 162/340 (47%), Gaps = 33/340 (9%)

Query: 53  LVGVDIRFVAAG--CVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
           L G D+  +A+   C + H  A  D + + Y+WG  + G+LGHG+      P  +  L  
Sbjct: 66  LSGFDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQG 125

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATAC 168
            KIK+   G SH + VT+ G   ++G N++GQLG G+  + + P  +       V   A 
Sbjct: 126 IKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHAFEGVCVKMIAA 185

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
           GA+ T   + +E   +   G  QYG LG G  N+              +  P  ++++ G
Sbjct: 186 GAEHTA--AILEDGDLYGWGWGQYGNLGLGDRND--------------RLVPEKVSSVEG 229

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           E +V VACG  HTV V S G +YT+G+  YG+LGH + +D  VP +++  +   +    +
Sbjct: 230 EKMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFI----S 285

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            I+ G  ++   AG G+LY WG  K       +  D   P  ++      +  +  G  H
Sbjct: 286 QIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVDHCSPVQVIFPDEQKVAQVACGWRH 345

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
              +  + +  SWG    G+LG+G    +++  PK +D L
Sbjct: 346 TLALTENKNVFSWGRGTSGQLGHGEIIDRNT--PKMIDAL 383



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 161/358 (44%), Gaps = 34/358 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG- 116
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT++S      I     
Sbjct: 22  VALVSAG--ANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGIASVVI 79

Query: 117 AGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
            G  HT   +++   L ++GW   G+LG G+  +   P P+  L   ++   ACG     
Sbjct: 80  CGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSHC- 138

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+  +   + + G  Q GQLG G     NT+DS +         P+ I A  G  +  +
Sbjct: 139 -LAVTDAGQVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIHAFEGVCVKMI 183

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A G  HT A+   G +Y WG+G YG LG  ++ D  VP +V   +   ++    +++ G 
Sbjct: 184 AAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEKMV----LVACGW 239

Query: 295 VNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
            ++   +  G LY +G  K     +GD  D + P  L  L    +  +  G  H   V  
Sbjct: 240 RHTVTVSSSGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAG 299

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           D     WG  ++G++G        S  P +V   +   V  VACG+ H+L + +  NV
Sbjct: 300 DGKLYGWGWNKFGQVGVADNVDHCS--PVQVIFPDEQKVAQVACGWRHTLALTENKNV 355



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 29/286 (10%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++  P  +  L G+ I+ +A  C   HC+AV   G+ ++WGRN+ GQ
Sbjct: 100 WGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIA--CGDSHCLAVTDAGQVHSWGRNQNGQ 157

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +       +K   AG  HT  + EDG+   +GW ++G LG G   +
Sbjct: 158 LGLGNTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRND 217

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  E +   ACG   TV +SS     +   G  +YGQLGHG          
Sbjct: 218 RLVPEKVSSVEGEKMVLVACGWRHTVTVSS--SGDLYTYGWSKYGQLGHGD--------- 266

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL    I ++A G  HT+AV   G +Y WG+  +G++G  +  D
Sbjct: 267 -----FEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNVD 321

Query: 269 EWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTAGGGQLYMWGK 311
              P +V       + P E   A ++ G  ++        ++ WG+
Sbjct: 322 HCSPVQV-------IFPDEQKVAQVACGWRHTLALTENKNVFSWGR 360



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 145/309 (46%), Gaps = 38/309 (12%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
           V E  +  +    AG +H+V +       ++G  + GQLG G    + E  PV  L+S  
Sbjct: 14  VPEAPEQTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHG----DAEDRPVPTLLSGF 69

Query: 164 ------TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
                 +   CGAD T   S  E   + + G   +G+LGHG  ++               
Sbjct: 70  DVPGIASVVICGADHTTAYSD-EQMQLYSWGWGDFGRLGHGNSSDVF------------- 115

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P+ I AL G  I ++ACG +H +AV   G V++WG    G+LG    +D  +P+++  
Sbjct: 116 -HPQPIEALQGIKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTEDSLLPQKIHA 174

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGW 331
           F+   V     +I+AG+ +++     G LY   WG+  N G    +D + P+ +  + G 
Sbjct: 175 FEGVCV----KMIAAGAEHTAAILEDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGE 230

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H   V +     ++G ++YG+LG+G +  +   +P K++ L+   +  +A
Sbjct: 231 KMVLVACGWRHTVTVSSSGDLYTYGWSKYGQLGHGDF--EDHLVPHKLEALKDRFISQIA 288

Query: 391 CGYGHSLVI 399
            G+ H++ +
Sbjct: 289 GGWRHTMAV 297



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 90/180 (50%), Gaps = 11/180 (6%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           +T+  V+ G NH+VA+ S   V +WG G  G+LGH + +D  VP  +  F    +     
Sbjct: 20  QTVALVSAGANHSVALLSSKAVCSWGRGEDGQLGHGDAEDRPVPTLLSGFDVPGI--ASV 77

Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           VI      ++ +    QLY W     G+L + N  D  +P+P+  L G  ++ +  G+ H
Sbjct: 78  VICGADHTTAYSDEQMQLYSWGWGDFGRLGHGNSSDVFHPQPIEALQGIKIKQIACGDSH 137

Query: 343 HFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                D+  + SWG  Q G+LG G    + S +P+K+   EG+ V  +A G  H+  I++
Sbjct: 138 CLAVTDAGQVHSWGRNQNGQLGLG--NTEDSLLPQKIHAFEGVCVKMIAAGAEHTAAILE 195



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+   A + +  SP ++  +   + +     C   H +A+      ++WGR   GQ
Sbjct: 308 WNKFGQVGVADNVDHCSPVQV--IFPDEQKVAQVACGWRHTLALTENKNVFSWGRGTSGQ 365

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LGHG+ I R+ P ++  LS
Sbjct: 366 LGHGEIIDRNTPKMIDALS 384


>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
 gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
            marcescens FGI94]
          Length = 1812

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 160/349 (45%), Gaps = 34/349 (9%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--S 105
            T L PL G  +  ++ G  +    A+D +GR + WG N  G LG G  I R+RP +V  +
Sbjct: 1474 TDLTPLGGSTVVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPVLVDLA 1533

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----- 160
             L   K+    AGR H +V+ +     A+G N  GQLG G+  N   P P++  +     
Sbjct: 1534 SLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAG 1593

Query: 161  SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
            S VT    G   ++ L  +    +   G  +YG+LG GT              Y+ +P  
Sbjct: 1594 STVTGVWAGDFHSIILDDL--GRLWVWGKNKYGELGDGTTT------------YQTRPVL 1639

Query: 221  RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
              +  L G  ++ V+ G +HTVA+D +G ++ WG    GRLG     D   P +VD+   
Sbjct: 1640 VDLLPLNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSL 1699

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP----LMDLSGWN 332
            +        ISAG  N+      G+L+ WG     L  +G      +P    L  L+G  
Sbjct: 1700 DG--HKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDGTTINQHRPVQVDLTPLNGRK 1757

Query: 333  LRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI 380
            +  + +G+ + FV  D   + +WG   YG+LG G   ++    P +VD+
Sbjct: 1758 VVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTRR--LKPVRVDM 1804



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 21/239 (8%)

Query: 50   LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--EL 107
            L PL G  +  V AG    H + +D  GR + WG+N+ G+LG G    + RP +V    L
Sbjct: 1588 LEPLAGSTVTGVWAG--DFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPL 1645

Query: 108  SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVT 164
            +  K+    AG  HTV + E G   A+G N  G+LG GS  +   P  V        +V 
Sbjct: 1646 NGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVV 1705

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
            A + G   TV L   E   +   G  + G LG GT               + +P    + 
Sbjct: 1706 AISAGGWNTVALD--ELGRLWAWGPNESGLLGDGTT------------INQHRPVQVDLT 1751

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L G  +V V+ G+ +   VD +G ++ WG   YG+LG   +     P RVD+   NN 
Sbjct: 1752 PLNGRKVVAVSAGSFYFFVVDDRGELWAWGSNSYGQLGDGTKTRRLKPVRVDMSAMNNT 1810



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 71/300 (23%), Positives = 124/300 (41%), Gaps = 40/300 (13%)

Query: 113  KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
             +  AG  H++++       ++G+N+ G LG G+ R+   P     +++++  T  G   
Sbjct: 1431 NRMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRP-----VLTDL--TPLGGST 1483

Query: 173  TVWLSSVEGASILNA----------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
             V +S+  GAS   A          G    G LG GT  + N            +P    
Sbjct: 1484 VVSISTGSGASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRN------------RPVLVD 1531

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            +A+L    +  VA G  H + +D +  ++ WG  G G+LG   + +   P  + V     
Sbjct: 1532 LASLGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPL 1591

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP----LMDLSGWNLR 334
                   + AG  +S      G+L++WGK K     +G      +P    L+ L+G  + 
Sbjct: 1592 AGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNGRKVM 1651

Query: 335  CMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             + +G  HH V  D      +WG    G LG G    +   +   +  L+G  V++++ G
Sbjct: 1652 AVSAGE-HHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTSLDGHKVVAISAG 1710



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 13/181 (7%)

Query: 233  KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            ++A G+ H++ +D+K  +++WGF   G LG    +D   P   D+              +
Sbjct: 1432 RMAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTPLGGSTVVSISTGS 1491

Query: 293  GSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGW---NLRCMDSGNMHH 343
            G+  S      G+L+ WG           G D   P  L+DL+      +  + +G  H+
Sbjct: 1492 GASRSQAIDDQGRLWAWGYNFAGALGDGTGIDRNRPV-LVDLASLGSSKVTAVAAGRYHN 1550

Query: 344  FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLVIV 400
             V  D S + +WGH   G+LG G     +  +P +VD+  L G  V  V  G  HS+++ 
Sbjct: 1551 LVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILD 1610

Query: 401  D 401
            D
Sbjct: 1611 D 1611


>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
          Length = 4733

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 19/269 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +++ PT L  +  V I+ +A      HC+A+  +   Y+WG  + G+LGHG+++  + P 
Sbjct: 3942 SVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPK 4001

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            ++  L  Y+I     G +H+  +T  G    +G  ++G+LG G   ++++P  +  LV  
Sbjct: 4002 LIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGY 4061

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +V   ACG+     L   +  ++ + G   YG+LG G  +                  P+
Sbjct: 4062 KVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PK 4107

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I +LAG  ++KV CG+  +VA+   G VYTWG G Y RLGH   +    P++V   Q  
Sbjct: 4108 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGK 4167

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             ++     I+ GS++    +  G+++ WG
Sbjct: 4168 KIIS----IATGSLHCVACSDEGEVFTWG 4192



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 22/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR       N+  P  +  L    I+ VA      H +A+ ++G+ 
Sbjct: 2946 GKLYACGE---GTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKV 3002

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+++  D+P ++  L   KI+    G SH+  +T  G    +G  ++
Sbjct: 3003 FSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 3062

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  ++ LV   +   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3063 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 3122

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P  I  L    +V++ CG   ++A+   G V+TWG G Y
Sbjct: 3123 GSEGCNI--------------PHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDY 3168

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH   +    P  ++  +   V+     ++ G+++       GQ+Y WG
Sbjct: 3169 FRLGHGSDQHVRKPTVIESLKDKKVIH----VAVGALHCLAVTDTGQVYAWG 3216



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 168/356 (47%), Gaps = 37/356 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG G       P  +  LS+Y IKK    +G  H + +T DG 
Sbjct: 2942 VSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGK 3001

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  N  +P  +  L S ++   ACG+  +  ++S     +   GL
Sbjct: 3002 VFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS--SGELYTWGL 3059

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG DN               Q +P+ I +L G  IV+VACG+    T+A+  +
Sbjct: 3060 GEYGRLGHG-DN-------------ITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDE 3105

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQL 306
            G+V++WG G +G+LG    +   +P  +   +R N L  E V I  G+  S      G++
Sbjct: 3106 GWVFSWGDGDFGKLGRGGSEGCNIPHNI---ERLNAL--EVVQIECGAQFSLALTKTGEV 3160

Query: 307  YMWGK----LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + WGK       +G D    KP  +  L    +  +  G +H     D+  + +WG   +
Sbjct: 3161 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 3220

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV-IVDRTNVGERLDQVIL 414
            G+ G G      +  P  V  LE +H+  VACG  HS+   +  T V  +++ VI 
Sbjct: 3221 GQQGNG--TTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQDTQVVSKVEPVIF 3274



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 19/269 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L G+++  +AA     H +A+  +   Y+WG  + G+LGHGD   ++ PT++  
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    I     G +++  ++ +G    +G   +G+LG G+  + + P+ +  L  E +  
Sbjct: 564 LKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIK 623

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+ +   L       + + G   YG+LG G                +    PR I  
Sbjct: 624 VACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG--------------GSDGSKLPRLIEK 669

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    IV+V CG   +VA+   G+VYTWG G   +LGH  +++   P  V+V +   V+ 
Sbjct: 670 LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG 729

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
               +S G  +       G++Y WGK +N
Sbjct: 730 ----VSLGVSHVLALTDQGEVYGWGKNEN 754



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 150/339 (44%), Gaps = 30/339 (8%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+
Sbjct: 3870 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3929

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   + + P+    ++ +  +  A   G    + LS+     + + G    G
Sbjct: 3930 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA--DNDVYSWGEGDDG 3987

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG            +LA E    P+ I AL G  I+ +ACG  H+ A+ S G +YTW
Sbjct: 3988 KLGHGN-----------RLACET---PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTW 4033

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ ++      V+  +    +G   + C      ++ W    
Sbjct: 4034 GKGRYGRLGHGDSEDQLKPKLIEELVGYKVI--DVACGSGDAQTLCITDDDNVWSWGDGD 4091

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
             GKL   G D    PK +  L+G  +  ++ G+        S S  +WG   Y  LG+G 
Sbjct: 4092 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG- 4150

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               +    PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 4151 -TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEV 4188



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 29/228 (12%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            NL  P  +  L    IR +A G  S H  A+   G  YTWG  E G+LGHGD I + +P 
Sbjct: 3020 NLDKPKMIEALRSKKIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPK 3077

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
            ++  L  ++I +   G   + T+ +T++G   ++G    G+LG G     +I + IE   
Sbjct: 3078 LIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE--- 3134

Query: 156  VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
             R    EV    CGA F++ L+  +   +   G   Y +LGHG+D               
Sbjct: 3135 -RLNALEVVQIECGAQFSLALT--KTGEVWTWGKGDYFRLGHGSDQHVR----------- 3180

Query: 216  AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
               +P  I +L  + ++ VA G  H +AV   G VY WG   +G+ G+
Sbjct: 3181 ---KPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 3225



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 40/343 (11%)

Query: 78   RCYTWGRNERGQLG--HGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            R + WG N++ QLG   G K++   +   +S+L  + I  AG  +S   +V+ +G   A 
Sbjct: 2895 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL--WPIHIAGGSKS-LFIVSHEGKLYAC 2951

Query: 135  GWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G   N   P P+  L   V +  A   G    + L +++G  + + G  +
Sbjct: 2952 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMAL-TLDG-KVFSWGEGE 3009

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
             G+LGHG  N  N              +P+ I AL  + I  +ACG++H+ A+ S G +Y
Sbjct: 3010 DGKLGHG--NRLNLD------------KPKMIEALRSKKIRDIACGSSHSAAITSSGELY 3055

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
            TWG G YGRLGH +   +  P+ +     + ++     ++ GS ++   A    G ++ W
Sbjct: 3056 TWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQ----VACGSRDAQTLALTDEGWVFSW 3111

Query: 310  -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
                 GKL   G +    P  +  L+   +  ++ G         +  + +WG   Y  L
Sbjct: 3112 GDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 3171

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+G    +    P  ++ L+   VI VA G  H L + D   V
Sbjct: 3172 GHG--SDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 3212



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ D 
Sbjct: 3917 AVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3976

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+      P  +  L   E+   ACG   +  ++S     +   G
Sbjct: 3977 DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITST--GQLYTWG 4034

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ I  L G  ++ VACG+    T+ +  
Sbjct: 4035 KGRYGRLGHG--------DS------EDQLKPKLIEELVGYKVIDVACGSGDAQTLCITD 4080

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP++++      V+  E     GS  S      G +
Sbjct: 4081 DDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVEC----GSQFSVALTRSGSV 4136

Query: 307  YMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK          G+    PK +  L G  +  + +G++H    +D     +WG    
Sbjct: 4137 YTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDE 4196

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG       +   P+ V  L+G  + +VACG  H+L
Sbjct: 4197 GQLGDD--TTNAIQRPRLVSALQGKKITNVACGSAHTL 4232



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 25/195 (12%)

Query: 220 PRAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ +  L+G  ++K+A      H +A+     VY+WG G  GRLGH +   +  P  +  
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
            +  +++  E     G   S+  +  G LY WG+           +D + P  +  LS  
Sbjct: 564 LKGKDIIDVEC----GGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDE 619

Query: 332 NLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           ++  +  G+ +    A + CI       SWG   YG+LG G  G   S +P+ ++ L+ +
Sbjct: 620 HIIKVACGSFY----AHTLCITSQGKVYSWGDGDYGKLGRG--GSDGSKLPRLIEKLQNV 673

Query: 385 HVISVACGYGHSLVI 399
            ++ V CG   S+ +
Sbjct: 674 KIVQVYCGAQFSVAL 688



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 17/200 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++PT +  L    I  VA G    H + +  +G+ Y+WG  + G+LG G       P ++
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLI 667

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
            +L   KI +   G   +V ++EDG+   +G  +  +LG  +  N   P  V  L   +V
Sbjct: 668 EKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKV 727

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              + G    + L+             Q    G G +      DSS     +    PR I
Sbjct: 728 VGVSLGVSHVLALTD------------QGEVYGWGKNENKQICDSSELFVQQ----PRLI 771

Query: 224 AALAGETIVKVACGTNHTVA 243
            AL G+ +V V CG   + A
Sbjct: 772 EALKGQKVVGVCCGPAQSFA 791



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
            +  V   C +   +A+   G  +TWG+ +  +LGHG      +PT++  L   K+     
Sbjct: 3139 LEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAV 3198

Query: 118  GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
            G  H + VT+ G   A+G N HGQ G+G+     +P+ V  L    +   ACG+  ++
Sbjct: 3199 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSI 3256



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  PT +  L    +  VA G +  HC+AV   G+ Y WG N+ GQ G+G  I   +
Sbjct: 3176 DQHVRKPTVIESLKDKKVIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRK 3233

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            P +V  L    I +   G SH++  T
Sbjct: 3234 PALVHGLEDVHINRVACGSSHSIAWT 3259


>gi|159037340|ref|YP_001536593.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916175|gb|ABV97602.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 563

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 167/386 (43%), Gaps = 32/386 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           ++A+G+       N  +P  +       I  +AAG V+ H +AV        WG N  GQ
Sbjct: 67  FNALGQLGDGTTTNRNTPVTVDLPADTTITAIAAG-VNGHSLAVTSASTMLAWGFNTWGQ 125

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G    R+ P  V   +   I    AG+SH++ VT  G  LA+G N  GQLG G+  N
Sbjct: 126 LGDGTTTNRNTPVAVDLPTGTTITAIAAGKSHSLAVTSAGTMLAWGLNSAGQLGDGTTTN 185

Query: 150 EIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
              P  V     + +TA A G   ++ L+S    ++L  G   +GQLG GT    NT   
Sbjct: 186 RNTPVAVDLPTGTTITAIAAGNGHSLALTSA--GTMLAWGENTWGQLGDGTTTNRNT--- 240

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                      P  +    G TI  +A G  H++AV S G +  WGF  +G+LG     +
Sbjct: 241 -----------PVTVDLPTGTTITALAGGGGHSLAVTSTGTMLAWGFNFWGQLGDGTTTN 289

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPK 323
              P  VD+     +          S+ ++ T   G +  W     G+L +         
Sbjct: 290 RNTPVAVDLPTGTTITAIAGGGGGHSLAATST---GTMLAWGLNSFGQLGDGTTSNRSTP 346

Query: 324 PLMDL-SGWNLRCMDS-GNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
             +DL +G  +  + + G   H + A S  + ++WG    G+LG G    +S+  P  VD
Sbjct: 347 VTVDLPAGTTITAIAAGGGSGHSLAATSTGTMLAWGANTLGQLGDGTTSNRST--PVTVD 404

Query: 380 ILEGMHVISVACGYGHSLVIVDRTNV 405
           +  G  + +V  G  HSL IV  T+ 
Sbjct: 405 LPAGTTITAVTAGGFHSLAIVPSTST 430



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 145/341 (42%), Gaps = 30/341 (8%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG-RSHTVVV 125
           S    A    G    WG N  GQLG G    R+ P  V   +   I    AG   H++ V
Sbjct: 50  SVPSAAAGTPGTGLAWGFNALGQLGDGTTTNRNTPVTVDLPADTTITAIAAGVNGHSLAV 109

Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
           T     LA+G+N  GQLG G+  N   P  V  L +  T TA  A  +  L+     ++L
Sbjct: 110 TSASTMLAWGFNTWGQLGDGTTTNRNTPVAVD-LPTGTTITAIAAGKSHSLAVTSAGTML 168

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
             GL   GQLG GT    NT              P A+    G TI  +A G  H++A+ 
Sbjct: 169 AWGLNSAGQLGDGTTTNRNT--------------PVAVDLPTGTTITAIAAGNGHSLALT 214

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           S G +  WG   +G+LG     +   P  VD+     +    A+   G  + + T+ G  
Sbjct: 215 SAGTMLAWGENTWGQLGDGTTTNRNTPVTVDLPTGTTI---TALAGGGGHSLAVTSTGTM 271

Query: 306 LY----MWGKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHFVGADS--SCISWGHAQ 358
           L      WG+L +           +DL +G  +  +  G   H + A S  + ++WG   
Sbjct: 272 LAWGFNFWGQLGDGTTTNRNTPVAVDLPTGTTITAIAGGGGGHSLAATSTGTMLAWGLNS 331

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVAC--GYGHSL 397
           +G+LG G    +S+  P  VD+  G  + ++A   G GHSL
Sbjct: 332 FGQLGDGTTSNRST--PVTVDLPAGTTITAIAAGGGSGHSL 370


>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
           harrisii]
          Length = 552

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 132/272 (48%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P R+  L G  I  ++ G    H V    EG  YTWG N   QLG+G       PT I
Sbjct: 88  IEPRRVDHLCGKKIACLSYGS-GPHVVIATDEGEVYTWGHNAYNQLGNGTTNHGLVPTHI 146

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
            + L   K+ +   G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 147 STNLGNRKVIEVACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNK 206

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +  T ACG      ++ VE   +   G    GQLG G+                 QP P 
Sbjct: 207 IATTIACGQ--MCSMAVVESGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 250

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            IAAL G  + K+ CG  HT+ +  +G++Y WG   YG+LG   + ++  P  V V +++
Sbjct: 251 RIAALQGIRVHKIVCGYAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYPTPVSV-EKD 309

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            V+   A  SA +  S+     G +YMWG+ +
Sbjct: 310 RVIEIAACHSAHT--SAAKTQSGHIYMWGQCR 339



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 127/291 (43%), Gaps = 31/291 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  TE+      G N  G LG+G I + IEP  V  L   ++   + G+   V
Sbjct: 53  GSAGNEVLYSTENDEVFVLGTNCSGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGPHV 112

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ EG  +   G   Y QLG+GT N                  P  I+  L    +++
Sbjct: 113 VIATDEG-EVYTWGHNAYNQLGNGTTNH--------------GLVPTHISTNLGNRKVIE 157

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++H++ + S G V+ WG+   G++G     ++ +PR+V    +N +      I+ G
Sbjct: 158 VACGSHHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKI---ATTIACG 214

Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
            + S      G++Y+WG   N     G     P P  +  L G  +  +  G  H  V  
Sbjct: 215 QMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVHKIVCGYAHTLVLT 274

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
           D   + +WG   YG+LG G    +S   P  V   E   VI + AC   H+
Sbjct: 275 DEGHLYAWGANSYGQLGTGNKSNQSYPTPVSV---EKDRVIEIAACHSAHT 322



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ +  +  G    H + +  EG  Y WG N  GQLG G+K  +  P
Sbjct: 244 GNQPTPCRIAALQGIRVHKIVCG--YAHTLVLTDEGHLYAWGANSYGQLGTGNKSNQSYP 301

Query: 102 TIVSELSKYKIKKAGAGRSHT 122
           T VS      I+ A    +HT
Sbjct: 302 TPVSVEKDRVIEIAACHSAHT 322


>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 3894

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 134/269 (49%), Gaps = 19/269 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +++ PT L  +  V I+ +A      HC+A+  +   Y+WG  + G+LGHG+++  + P 
Sbjct: 3103 SVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADNDVYSWGEGDDGKLGHGNRLACETPK 3162

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            ++  L  Y+I     G +H+  +T  G    +G  ++G+LG G   ++++P  +  LV  
Sbjct: 3163 LIEALQGYEIIDIACGGAHSAAITSTGQLYTWGKGRYGRLGHGDSEDQLKPKLIEELVGY 3222

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +V   ACG+     L   +  ++ + G   YG+LG G  +                  P+
Sbjct: 3223 KVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKV--------------PK 3268

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I +LAG  ++KV CG+  +VA+   G VYTWG G Y RLGH   +    P++V   Q  
Sbjct: 3269 KIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGTGEHVRRPKKVAALQGK 3328

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             ++     I+ GS++    +  G+++ WG
Sbjct: 3329 KIIS----IATGSLHCVACSDEGEVFTWG 3353



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 77/292 (26%), Positives = 133/292 (45%), Gaps = 22/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR       N+  P  +  L    I+ VA      H +A+ ++G+ 
Sbjct: 2107 GKLYACGE---GTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGKV 2163

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+++  D+P ++  L   KI+    G SH+  +T  G    +G  ++
Sbjct: 2164 FSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITSSGELYTWGLGEY 2223

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  ++ LV   +   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2224 GRLGHGDNITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRG 2283

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P  I  L    +V++ CG   ++A+   G V+TWG G Y
Sbjct: 2284 GSEGCNI--------------PHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDY 2329

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH   +    P  ++  +   V+     ++ G+++       GQ+Y WG
Sbjct: 2330 FRLGHGSDQHVRKPTVIESLKDKKVIH----VAVGALHCLAVTDTGQVYAWG 2377



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 168/356 (47%), Gaps = 37/356 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG G       P  +  LS+Y IKK    +G  H + +T DG 
Sbjct: 2103 VSHEGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMALTLDGK 2162

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  N  +P  +  L S ++   ACG+  +  ++S     +   GL
Sbjct: 2163 VFSWGEGEDGKLGHGNRLNLDKPKMIEALRSKKIRDIACGSSHSAAITS--SGELYTWGL 2220

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG DN               Q +P+ I +L G  IV+VACG+    T+A+  +
Sbjct: 2221 GEYGRLGHG-DN-------------ITQLKPKLIKSLVGHRIVQVACGSRDAQTLALTDE 2266

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQL 306
            G+V++WG G +G+LG    +   +P  +   +R N L  E V I  G+  S      G++
Sbjct: 2267 GWVFSWGDGDFGKLGRGGSEGCNIPHNI---ERLNAL--EVVQIECGAQFSLALTKTGEV 2321

Query: 307  YMWGK----LKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + WGK       +G D    KP  +  L    +  +  G +H     D+  + +WG   +
Sbjct: 2322 WTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDH 2381

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV-IVDRTNVGERLDQVIL 414
            G+ G G      +  P  V  LE +H+  VACG  HS+   +  T V  +++ VI 
Sbjct: 2382 GQQGNG--TTIVNRKPALVHGLEDVHINRVACGSSHSIAWTLQDTQVVSKVEPVIF 2435



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 150/339 (44%), Gaps = 30/339 (8%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    LS  +  +   G      VT DG   A G+
Sbjct: 3031 GTIYGWGHNHRGQLGGIEGAKVKIPTPCEALSTLRPVQLVGGEQTLFAVTADGKVYATGY 3090

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   + + P+    ++ +  +  A   G    + LS+     + + G    G
Sbjct: 3091 GAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSA--DNDVYSWGEGDDG 3148

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG            +LA E    P+ I AL G  I+ +ACG  H+ A+ S G +YTW
Sbjct: 3149 KLGHGN-----------RLACET---PKLIEALQGYEIIDIACGGAHSAAITSTGQLYTW 3194

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+  P+ ++      V+  +    +G   + C      ++ W    
Sbjct: 3195 GKGRYGRLGHGDSEDQLKPKLIEELVGYKVI--DVACGSGDAQTLCITDDDNVWSWGDGD 3252

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
             GKL   G D    PK +  L+G  +  ++ G+        S S  +WG   Y  LG+G 
Sbjct: 3253 YGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG- 3311

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               +    PKKV  L+G  +IS+A G  H +   D   V
Sbjct: 3312 -TGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEV 3349



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 107/228 (46%), Gaps = 29/228 (12%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            NL  P  +  L    IR +A G  S H  A+   G  YTWG  E G+LGHGD I + +P 
Sbjct: 2181 NLDKPKMIEALRSKKIRDIACG--SSHSAAITSSGELYTWGLGEYGRLGHGDNITQLKPK 2238

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
            ++  L  ++I +   G   + T+ +T++G   ++G    G+LG G     +I + IE   
Sbjct: 2239 LIKSLVGHRIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIE--- 2295

Query: 156  VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
             R    EV    CGA F++ L+  +   +   G   Y +LGHG+D               
Sbjct: 2296 -RLNALEVVQIECGAQFSLALT--KTGEVWTWGKGDYFRLGHGSDQHVR----------- 2341

Query: 216  AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
               +P  I +L  + ++ VA G  H +AV   G VY WG   +G+ G+
Sbjct: 2342 ---KPTVIESLKDKKVIHVAVGALHCLAVTDTGQVYAWGDNDHGQQGN 2386



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 155/343 (45%), Gaps = 40/343 (11%)

Query: 78   RCYTWGRNERGQLG--HGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            R + WG N++ QLG   G K++   +   +S+L  + I  AG  +S   +V+ +G   A 
Sbjct: 2056 RVFVWGLNDKDQLGGMKGSKVKLPVQSDFLSQL--WPIHIAGGSKS-LFIVSHEGKLYAC 2112

Query: 135  GWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G   N   P P+  L   V +  A   G    + L +++G  + + G  +
Sbjct: 2113 GEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHSGGKHAMAL-TLDG-KVFSWGEGE 2170

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
             G+LGHG  N  N              +P+ I AL  + I  +ACG++H+ A+ S G +Y
Sbjct: 2171 DGKLGHG--NRLNLD------------KPKMIEALRSKKIRDIACGSSHSAAITSSGELY 2216

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
            TWG G YGRLGH +   +  P+ +     + ++     ++ GS ++   A    G ++ W
Sbjct: 2217 TWGLGEYGRLGHGDNITQLKPKLIKSLVGHRIVQ----VACGSRDAQTLALTDEGWVFSW 2272

Query: 310  -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
                 GKL   G +    P  +  L+   +  ++ G         +  + +WG   Y  L
Sbjct: 2273 GDGDFGKLGRGGSEGCNIPHNIERLNALEVVQIECGAQFSLALTKTGEVWTWGKGDYFRL 2332

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+G    +    P  ++ L+   VI VA G  H L + D   V
Sbjct: 2333 GHG--SDQHVRKPTVIESLKDKKVIHVAVGALHCLAVTDTGQV 2373



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 147/338 (43%), Gaps = 34/338 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G       PT++  +    IKK    +G  H + ++ D 
Sbjct: 3078 AVTADGKVYATGYGAGGRLGIGGTDSVLVPTLLESIQHVFIKKIAVNSGGKHCLALSADN 3137

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
            +  ++G    G+LG G+      P  +  L   E+   ACG   +  ++S     +   G
Sbjct: 3138 DVYSWGEGDDGKLGHGNRLACETPKLIEALQGYEIIDIACGGAHSAAITST--GQLYTWG 3195

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q +P+ I  L G  ++ VACG+    T+ +  
Sbjct: 3196 KGRYGRLGHG--------DS------EDQLKPKLIEELVGYKVIDVACGSGDAQTLCITD 3241

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG        VP++++      V+  E     GS  S      G +
Sbjct: 3242 DDNVWSWGDGDYGKLGRGGSDGCKVPKKIESLAGLGVIKVEC----GSQFSVALTRSGSV 3297

Query: 307  YMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            Y WGK          G+    PK +  L G  +  + +G++H    +D     +WG    
Sbjct: 3298 YTWGKGDYHRLGHGTGEHVRRPKKVAALQGKKIISIATGSLHCVACSDEGEVFTWGDNDE 3357

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+LG       +   P+ V  L+G  + +VACG  H+L
Sbjct: 3358 GQLGDD--TTNAIQRPRLVSALQGKKITNVACGSAHTL 3393



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 1/118 (0%)

Query: 58   IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
            +  V   C +   +A+   G  +TWG+ +  +LGHG      +PT++  L   K+     
Sbjct: 2300 LEVVQIECGAQFSLALTKTGEVWTWGKGDYFRLGHGSDQHVRKPTVIESLKDKKVIHVAV 2359

Query: 118  GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
            G  H + VT+ G   A+G N HGQ G+G+     +P+ V  L    +   ACG+  ++
Sbjct: 2360 GALHCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRKPALVHGLEDVHINRVACGSSHSI 2417



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  PT +  L    +  VA G +  HC+AV   G+ Y WG N+ GQ G+G  I   +
Sbjct: 2337 DQHVRKPTVIESLKDKKVIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTIVNRK 2394

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            P +V  L    I +   G SH++  T
Sbjct: 2395 PALVHGLEDVHINRVACGSSHSIAWT 2420


>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
           garnettii]
          Length = 551

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P +L  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDIQST-IEPRKLDSLSGKKIACLSYGS-GPHVVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVIVTIACGQ--MCSMAVVDTGEVFVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  IAAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ V+   A  SA +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 138/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDIQSTIEPRKLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   V L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHVVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++++WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVI---VTIACGQMCSMAVVDTGEVFVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   VI +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRVIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSAHT 321


>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
          Length = 353

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/257 (30%), Positives = 122/257 (47%), Gaps = 20/257 (7%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 92  WGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 149

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 150 LGLGTTEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 209

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P  V  +  E +   ACG   T+ +S  +  ++   G  +YGQLGHG          
Sbjct: 210 RLLPEKVSSVEGEKMVLVACGWRHTITVS--DSGNLYTYGWSKYGQLGHGD--------- 258

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                +E    P  + AL   TI +++ G  HT+A+ S+G +Y WG+  +G++G     D
Sbjct: 259 -----FEDHLVPHKVEALKDSTISQISGGWRHTMALTSEGKLYGWGWNKFGQVGVGNNDD 313

Query: 269 EWVPRRVDVFQRNNVLP 285
              P +V  F  +  LP
Sbjct: 314 HSSPGQVS-FPGSENLP 329



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 128/267 (47%), Gaps = 25/267 (9%)

Query: 49  RLRPLVGVDIRFVAAGCVSC---HCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           RL P V       A   V C   H  A  + E + Y+WG  + G+LGHG+      P  V
Sbjct: 53  RLVPTVLSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPV 112

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
             L   KIK+   G SH + VT  G   ++G N++GQLG G+  + + P  ++   S  V
Sbjct: 113 KALQGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCV 172

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A GA+ T   +  E   +   G  +YG LG G  N+              +  P  +
Sbjct: 173 KMIAAGAEHTA--AVTEDGDLYGWGWGRYGNLGLGDRND--------------RLLPEKV 216

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           +++ GE +V VACG  HT+ V   G +YT+G+  YG+LGH + +D  VP +V+  + + +
Sbjct: 217 SSVEGEKMVLVACGWRHTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTI 276

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
               + IS G  ++      G+LY WG
Sbjct: 277 ----SQISGGWRHTMALTSEGKLYGWG 299



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 146/324 (45%), Gaps = 31/324 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT++S      I     
Sbjct: 15  VVLVSAG--ASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAITSVIC 72

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  HT   +ED   + ++GW   G+LG G+  +   P PV+ L   ++   ACG      
Sbjct: 73  GADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSHC-- 130

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G  Q GQLG GT     T+DS +         P+ I A     +  +A
Sbjct: 131 LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQAFESVCVKMIA 176

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  HT AV   G +Y WG+G YG LG  ++ D  +P +V   +   ++    +++ G  
Sbjct: 177 AGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEKMV----LVACGWR 232

Query: 296 NSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           ++   +  G LY +G  K     +GD  D + P  +  L    +  +  G  H   + ++
Sbjct: 233 HTITVSDSGNLYTYGWSKYGQLGHGDFEDHLVPHKVEALKDSTISQISGGWRHTMALTSE 292

Query: 349 SSCISWGHAQYGELGYGPYGQKSS 372
                WG  ++G++G G     SS
Sbjct: 293 GKLYGWGWNKFGQVGVGNNDDHSS 316



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 113/251 (45%), Gaps = 30/251 (11%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   + GA  +V L  + G  + + G  + GQLGHG        D+  +L       P  
Sbjct: 15  VVLVSAGASHSVAL--LTGNVLCSWGRGEDGQLGHG--------DAEDRLV------PTV 58

Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           ++      I  V CG +HT A  + +  VY+WG+G +GRLGH    D + P+ V   Q  
Sbjct: 59  LSGFDAPAITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGL 118

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRC 335
            +      I+ G  +       G++  WG+ +N        +D + P+ +       ++ 
Sbjct: 119 KI----KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAFESVCVKM 174

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           + +G  H   V  D     WG  +YG LG G    +   +P+KV  +EG  ++ VACG+ 
Sbjct: 175 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR--LLPEKVSSVEGEKMVLVACGWR 232

Query: 395 HSLVIVDRTNV 405
           H++ + D  N+
Sbjct: 233 HTITVSDSGNL 243



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 12/184 (6%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           +T+V V+ G +H+VA+ +   + +WG G  G+LGH + +D  VP  +  F    +    +
Sbjct: 13  QTVVLVSAGASHSVALLTGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAPAI---TS 69

Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           VI      ++ +    Q+Y W     G+L + N  D   P+P+  L G  ++ +  G+ H
Sbjct: 70  VICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGLKIKQIACGDSH 129

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              V       SWG  Q G+LG G    + S +P+K+   E + V  +A G  H+  + +
Sbjct: 130 CLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLLPQKIQAFESVCVKMIAAGAEHTAAVTE 187

Query: 402 RTNV 405
             ++
Sbjct: 188 DGDL 191


>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
           protein 2 [Mustela putorius furo]
          Length = 344

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 133/272 (48%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H V    EG  +TWG N   QLG+G       P  I
Sbjct: 16  IEPRRLESLNGKKIACLSYG-SGPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 74

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
            + LS  ++ +   G  H++V+T DG   A+G+N  GQ+GSGS  N++ P  V  CL ++
Sbjct: 75  STNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQLIPRRVTGCLQNK 134

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V    ACG   +  ++ V    +   G    GQLG G+                 QP P 
Sbjct: 135 VVVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 178

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            IAAL G  + +VACG  HT+ +  +G VY WG   YG+LG   + ++  P  V V +++
Sbjct: 179 RIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV-VVEKD 237

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 238 RIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 267



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 121/267 (45%), Gaps = 31/267 (11%)

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G LG G +++ IEP  +  L   ++   + G+   + L++ EG  +   G   Y QLG+G
Sbjct: 5   GCLGLGDVQSTIEPRRLESLNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNG 63

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           T N                  P  I+  L+ + + +VACG+ H++ + S G V+ WG+  
Sbjct: 64  TTNH--------------GLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNN 109

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN-- 315
            G++G     ++ +PRRV    +N V+     I+ G + S      G++Y+WG   N   
Sbjct: 110 SGQVGSGSTANQLIPRRVTGCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQL 166

Query: 316 --GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQK 370
             G     P P  +  L G  ++ +  G  H  V  D   + +WG   YG+LG G    +
Sbjct: 167 GLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQ 226

Query: 371 SSAMPKKVDILEGMHVISV-ACGYGHS 396
           S   P    ++E   +I + AC   H+
Sbjct: 227 SYPAPV---VVEKDRIIEIAACHSAHT 250



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            GN  +P R+  L G+ ++ VA G    H + +  EG+ Y WG N  GQLG G+K  +  
Sbjct: 171 SGNQPTPCRIAALQGIRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSY 228

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  V       I+ A    +HT      G
Sbjct: 229 PAPVVVEKDRIIEIAACHSAHTSAAKTQG 257


>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 4784

 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 151/354 (42%), Gaps = 85/354 (24%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT +  L  V I+ VA      HC+A+  +G  ++WG  E G+LGHG++   DRP ++ 
Sbjct: 4019 TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVFSWGEGEDGKLGHGNRDSYDRPKLIE 4078

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             LS   +     G +H+  +T  G+ L +G  ++G+LG G   ++++P   RC++   T 
Sbjct: 4079 ALSGIGVVDIACGSAHSACITSQGHVLTWGKGRYGRLGHGDSEDQLQPK--RCVLR--TT 4134

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
              CG           G + + A L +   +G  +                    P  I +
Sbjct: 4135 IMCGV----------GVTAIMASLAEEVPMGARS--------------------PMKIES 4164

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            LAG  ++KV CG+  +VA+   G VYTWG G Y RLGH        P++V   Q   ++ 
Sbjct: 4165 LAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIIS 4224

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
                I+ GS++    +  G+++ WG    + D+                           
Sbjct: 4225 ----IATGSLHCVACSDSGEVFTWG----DNDE--------------------------- 4249

Query: 346  GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                          G+LG G     +   P+ V  L+G H++ V CG  H+L +
Sbjct: 4250 --------------GQLGDGTV--TAIQRPRLVQSLQGKHIVKVICGSAHTLAL 4287



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/294 (25%), Positives = 134/294 (45%), Gaps = 22/294 (7%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            + G+L  CG       GR     + N+ +P ++  L    ++ VA      H +A+ ++G
Sbjct: 2957 QDGKLYACGE---GTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDG 3013

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + ++WG  E G+LGHG+++  ++P ++  L   +I+    G SH+  +T  G    +G  
Sbjct: 3014 KVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITSSGELYTWGLG 3073

Query: 138  KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            ++G+LG G    +++P  V  L    V   ACG+     L   E   + + G   +G+LG
Sbjct: 3074 EYGRLGHGDNCTQLKPKLVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLG 3133

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             G                E    P  +  L G  +V++ CG   ++A+   G V+TWG G
Sbjct: 3134 RG--------------GSEGCSVPHQVERLNGVGVVQIECGAQFSLALTKIGEVWTWGKG 3179

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             Y RLGH   +    P  +   +   V+     ++ G+++       GQ++ WG
Sbjct: 3180 DYYRLGHGTDQHVRKPTPIQGLRGKKVIH----VAVGALHCLAVTDSGQVFAWG 3229



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 182/401 (45%), Gaps = 43/401 (10%)

Query: 11   EEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHC 70
            +E++  E   ++L  G    + +G  KG+    +  PT    L  +    ++ G  S   
Sbjct: 2898 DEQSSNEISSKVLVWGLNDKEQLGGLKGS---KVKLPTYSSVLSQLKPIHISGGSKSLFI 2954

Query: 71   VAVDVEGRCYTWGR--NERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVT 126
            V+ D  G+ Y  G   N R  LGH + +    P  V  L++Y +KK    +G  H + +T
Sbjct: 2955 VSQD--GKLYACGEGTNGRLGLGHNNNV--PTPRQVPILNQYVVKKVAVHSGGKHAMALT 3010

Query: 127  EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASIL 185
             DG   ++G  + G+LG G+     +P  +  L    +   ACG+  +  ++S     + 
Sbjct: 3011 LDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESLRTKRIRDIACGSSHSAAITS--SGELY 3068

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVA 243
              GL +YG+LGHG        D+  +L      +P+ + AL G  +V+VACG+    T+ 
Sbjct: 3069 TWGLGEYGRLGHG--------DNCTQL------KPKLVTALQGHRVVQVACGSRDAQTLC 3114

Query: 244  VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
            +  +G V++WG G +G+LG    +   VP +V+      V+     I  G+  S      
Sbjct: 3115 LTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVERLNGVGVVQ----IECGAQFSLALTKI 3170

Query: 304  GQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGH 356
            G+++ WGK     L +  D  +  P P+  L G  +  +  G +H     DS    +WG 
Sbjct: 3171 GEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVFAWGD 3230

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
              +G+ G G      +  P  V  L+G+ V  VACG  HS+
Sbjct: 3231 NDHGQQGSG--NTVVNKKPNLVLGLDGVFVNRVACGSSHSV 3269



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 144/330 (43%), Gaps = 39/330 (11%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            + WG N RGQLG  D  +   PT    LS  +  +   G      VT DG   A G+   
Sbjct: 3947 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRPIQIAGGEQTLYAVTPDGKLYATGYGAG 4006

Query: 140  GQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G   +   P+ V  L   + +  A   G    + LSS     + + G  + G+LG
Sbjct: 4007 GRLGIGGTDSVSTPTLVESLQHVIIKKVAVNSGGKHCLALSS--DGEVFSWGEGEDGKLG 4064

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG  + Y+              RP+ I AL+G  +V +ACG+ H+  + S+G+V TWG G
Sbjct: 4065 HGNRDSYD--------------RPKLIEALSGIGVVDIACGSAHSACITSQGHVLTWGKG 4110

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
             YGRLGH + +D+  P+R        VL    +   G V +   +   ++ M  +     
Sbjct: 4111 RYGRLGHGDSEDQLQPKRC-------VLRTTIMCGVG-VTAIMASLAEEVPMGAR----- 4157

Query: 317  DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMP 375
                 P  +  L+G  +  ++ G+        S S  +WG   Y  LG+G         P
Sbjct: 4158 ----SPMKIESLAGLGVIKVECGSQFSVALTRSGSVYTWGKGDYHRLGHG--NTDHVRRP 4211

Query: 376  KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            KKV  L+G  +IS+A G  H +   D   V
Sbjct: 4212 KKVAALQGKKIISIATGSLHCVACSDSGEV 4241



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 131/268 (48%), Gaps = 23/268 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V+P  +  L GV +  +AA C   H +A+   G  Y+WG  E G+LGHGD   ++ PT +
Sbjct: 566 VAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVYSWGAGEGGRLGHGDTASKEVPTKI 625

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           + L K ++    AG S++  V+  G    +G   +G+LG G+  ++  P+ V+ L + +V
Sbjct: 626 A-LEK-QVTAIYAGASYSAAVSSVGELFTWGRGTYGRLGHGNSDDKFVPTQVQALKAYKV 683

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A G+     ++  +G  +   G   +G+LG+G+ N                P P  I
Sbjct: 684 VDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGSCN--------------GSPLPVQI 729

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             ++  ++ ++  G+  +VA+   G +Y+WG G  GRLGH   +   VP+ V   +   +
Sbjct: 730 EGVS--SVARIYSGSQFSVALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKI 787

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           +     ++ GS +       G+LY WG+
Sbjct: 788 VD----VAVGSAHCLALTSSGELYGWGR 811



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 101/217 (46%), Gaps = 33/217 (15%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG   +  +K+   K+A E Q             +  +  G +++ AV S G ++T
Sbjct: 609 GRLGHG---DTASKEVPTKIALEKQ-------------VTAIYAGASYSAAVSSVGELFT 652

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
           WG G YGRLGH    D++VP +V   +   V+  +  + +G  +S     GG L+ WG  
Sbjct: 653 WGRGTYGRLGHGNSDDKFVPTQVQALKAYKVV--DVALGSGDAHSMAVTDGGLLFAWGDG 710

Query: 311 ---KLKN---NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
              KL N   NG     P P+      ++  + SG+     +  D +  SWG    G LG
Sbjct: 711 DFGKLGNGSCNGS----PLPVQIEGVSSVARIYSGSQFSVALSYDGTLYSWGKGHGGRLG 766

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +G    + S +PK V  LEG  ++ VA G  H L + 
Sbjct: 767 HG--NSEHSNVPKLVHALEGKKIVDVAVGSAHCLALT 801



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 102/246 (41%), Gaps = 53/246 (21%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
             L  P  L  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3033 TLEKPKLLESLRTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPK 3090

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSP 155
            +V+ L  +++ +   G   + T+ +TE+G   ++G    G+LG G     S+ +++E   
Sbjct: 3091 LVTALQGHRVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGGSEGCSVPHQVE--- 3147

Query: 156  VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------- 204
             R     V    CGA F++ L+ +    +   G   Y +LGHGTD               
Sbjct: 3148 -RLNGVGVVQIECGAQFSLALTKI--GEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGK 3204

Query: 205  --------------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACG 237
                            DS    A+                 +P  +  L G  + +VACG
Sbjct: 3205 KVIHVAVGALHCLAVTDSGQVFAWGDNDHGQQGSGNTVVNKKPNLVLGLDGVFVNRVACG 3264

Query: 238  TNHTVA 243
            ++H+VA
Sbjct: 3265 SSHSVA 3270



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 3/136 (2%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SP ++  L G+ +  +   C S   VA+   G  YTWG+ +  +LGHG+     RP  V+
Sbjct: 4158 SPMKIESLAGLGV--IKVECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVA 4215

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   KI     G  H V  ++ G    +G N  GQLG G++     P  V+ L    + 
Sbjct: 4216 ALQGKKIISIATGSLHCVACSDSGEVFTWGDNDEGQLGDGTVTAIQRPRLVQSLQGKHIV 4275

Query: 165  ATACGADFTVWLSSVE 180
               CG+  T+ LS+ +
Sbjct: 4276 KVICGSAHTLALSTYQ 4291



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           VA+  +G  Y+WG+   G+LGHG+    + P +V  L   KI     G +H + +T  G 
Sbjct: 746 VALSYDGTLYSWGKGHGGRLGHGNSEHSNVPKLVHALEGKKIVDVAVGSAHCLALTSSGE 805

Query: 131 SLAFGWNKHGQL-GSGSIRNEI 151
              +G N + Q+  SG  R+ I
Sbjct: 806 LYGWGRNDYQQICPSGVSRDPI 827


>gi|327261081|ref|XP_003215360.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Anolis
           carolinensis]
          Length = 526

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 130/276 (47%), Gaps = 27/276 (9%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP- 101
           N V P RL  L G  I  ++ G    H V    EG  YTWG N   QLG+G       P 
Sbjct: 61  NSVEPRRLDTLCGKKITCLSYGS-GPHVVVATAEGEVYTWGHNAYSQLGNGTTNNSLLPC 119

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
            I + L   K+ +   G  H++++T DG    +G+N  GQ+GSGS  N+  P  V  CL 
Sbjct: 120 QISTNLVNKKVTEVACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQ 179

Query: 161 SEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           +++    ACG      ++ VE   +   G    GQLG G                  QP 
Sbjct: 180 NKIAVNIACGQ--MCSMAVVENGEVYVWGYNGNGQLGLGNSGN--------------QPT 223

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKDEWVPRRVDV 277
           P  IAAL G  + +VACG  HT+ +  +G +Y WG   YG+L  G+R  +   VP  VD 
Sbjct: 224 PCRIAALQGIRVQRVACGYAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYPVPITVD- 282

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
             ++ V+   A  SA +  S+    G Q+YMWG+ +
Sbjct: 283 --KDRVIEIAACHSAHT--SAAKTQGSQVYMWGQCR 314



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 125/273 (45%), Gaps = 27/273 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VTE+    A G N  G LG G  +N +EP  +  L   ++T  + G+   V
Sbjct: 28  GSAGNEVLYVTENNEVFALGTNCSGCLGVGDTQNSVEPRRLDTLCGKKITCLSYGSGPHV 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ EG  +   G   Y QLG+GT N                  P  I+  L  + + +
Sbjct: 88  VVATAEG-EVYTWGHNAYSQLGNGTTNN--------------SLLPCQISTNLVNKKVTE 132

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++H++ + S G VYTWG+   G++G     ++ +PRRV    +N +      I+ G
Sbjct: 133 VACGSHHSMILTSDGEVYTWGYNNSGQVGSGSTANQAIPRRVTSCLQNKI---AVNIACG 189

Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
            + S      G++Y+WG   N     G+    P P  +  L G  ++ +  G  H  V  
Sbjct: 190 QMCSMAVVENGEVYVWGYNGNGQLGLGNSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 249

Query: 348 DS-SCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           D     +WG   YG+LG G    +S  +P  VD
Sbjct: 250 DEGQMYAWGANSYGQLGTGNRSNQSYPVPITVD 282



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 2/91 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ ++ VA G    H + +  EG+ Y WG N  GQLG G++  +  P
Sbjct: 219 GNQPTPCRIAALQGIRVQRVACG--YAHTLVLTDEGQMYAWGANSYGQLGTGNRSNQSYP 276

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
             ++      I+ A    +HT      G+ +
Sbjct: 277 VPITVDKDRVIEIAACHSAHTSAAKTQGSQV 307


>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
           [Rhipicephalus pulchellus]
          Length = 1480

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 156/355 (43%), Gaps = 35/355 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT L  L  V I+ V       HC+A+  EG  Y+WG  + G+LGHG+K   +RP ++  
Sbjct: 657 PTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVIES 716

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
           L   ++     G +H+  +T  G    +G  ++G+LG G   +++ P  V  L    V  
Sbjct: 717 LRGKEVVDVACGGAHSACITASGELYTWGKGRYGRLGHGDSDDQLRPKKVEALSGWRVRC 776

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+     L   +   + + G   YG+LG G  +                  P  +  
Sbjct: 777 VACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRGGSDGCKV--------------PLRVDL 822

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G  +++V CG+  +VA+ + G VYTWG G Y RLGH        P+RV   Q   V+ 
Sbjct: 823 LQGMGVIRVECGSQFSVALTASGSVYTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVI- 881

Query: 286 PEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSG 339
               I+ GS++       G++Y W     G+L +   + ++ P+ +  L G  +  +  G
Sbjct: 882 ---CIAVGSLHCVACTDTGEVYTWGDNDEGQLGDGTVNAIHKPRLVAALQGKKINRVSCG 938

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           + H         ++W          G  G+   A+P + D+L  + + ++   Y 
Sbjct: 939 SAH--------TVAWSTCNPST--AGACGRMPPAVPLEYDLLRDIPIPTLRNRYA 983



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 133/331 (40%), Gaps = 76/331 (22%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G    WG N RGQLG  +  +   P     LS  +  +   G      VT DG   A G+
Sbjct: 581 GTILGWGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGY 640

Query: 137 NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
              G+LG G   +   P+ +  L    + +V   + G        S EG  + + G    
Sbjct: 641 GAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLAL--SAEG-EVYSWGEGDD 697

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG  +                 RPR I +L G+ +V VACG  H+  + + G +YT
Sbjct: 698 GKLGHGNKSSCE--------------RPRVIESLRGKEVVDVACGGAHSACITASGELYT 743

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           WG G YGRLGH +  D+  P++V+                                    
Sbjct: 744 WGKGRYGRLGHGDSDDQLRPKKVEA----------------------------------- 768

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
                          LSGW +RC+   SG+       D  C+ SWG   YG+LG G  G 
Sbjct: 769 ---------------LSGWRVRCVACGSGDAQTLCVTDDDCVWSWGDGDYGKLGRG--GS 811

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               +P +VD+L+GM VI V CG   S+ + 
Sbjct: 812 DGCKVPLRVDLLQGMGVIRVECGSQFSVALT 842



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/338 (28%), Positives = 153/338 (45%), Gaps = 34/338 (10%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSHTVVVTEDG 129
           AV  +G+ Y  G    G+LG G       PT++  L    IKK    +G  H + ++ +G
Sbjct: 628 AVTADGKVYATGYGAGGRLGIGGTDSVSCPTLLESLQHVFIKKVVVNSGGKHCLALSAEG 687

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
              ++G    G+LG G+  +   P  +  L   EV   ACG   +  +++     +   G
Sbjct: 688 EVYSWGEGDDGKLGHGNKSSCERPRVIESLRGKEVVDVACGGAHSACITA--SGELYTWG 745

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
             +YG+LGHG  ++              Q RP+ + AL+G  +  VACG+    T+ V  
Sbjct: 746 KGRYGRLGHGDSDD--------------QLRPKKVEALSGWRVRCVACGSGDAQTLCVTD 791

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
              V++WG G YG+LG        VP RVD+ Q   V+     +  GS  S      G +
Sbjct: 792 DDCVWSWGDGDYGKLGRGGSDGCKVPLRVDLLQGMGVI----RVECGSQFSVALTASGSV 847

Query: 307 YMWGK-----LKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
           Y WGK     L +  DD +  PK +  L G  + C+  G++H     D+  + +WG    
Sbjct: 848 YTWGKGDYHRLGHGTDDHVRRPKRVAALQGKKVICIAVGSLHCVACTDTGEVYTWGDNDE 907

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G+LG G     +   P+ V  L+G  +  V+CG  H++
Sbjct: 908 GQLGDGTV--NAIHKPRLVAALQGKKINRVSCGSAHTV 943


>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Callithrix jacchus]
          Length = 556

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 30/298 (10%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQ+GSGS  N+  P+P R   CL ++V  T ACG      ++ V+   +   G    GQL
Sbjct: 187 GQVGSGSTVNQ--PTPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQL 242

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG 
Sbjct: 243 GLGNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 288

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
             YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 289 NSYGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 130/293 (44%), Gaps = 36/293 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G   +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++  PRRV 
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
              +N V+     I+ G +        G++Y+WG        L N+G+    P P  +  
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258

Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
           L G  ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|393233866|gb|EJD41434.1| RCC1/BLIP-II [Auricularia delicata TFB-10046 SS5]
          Length = 592

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 185/427 (43%), Gaps = 50/427 (11%)

Query: 20  GELLFCGSTCWDAVGRR----KGALD----GNLVSPTRLRPLVGVDIRFVAAGCVSCHCV 71
           G ++  G T W +VG++    + A+D     +L  P  LRPL  V I  V       H V
Sbjct: 24  GRIVIAGGTDWPSVGKKDKGGQSAVDQDAHPDLYEPHVLRPLCNVRIVSVHGSPCGSHFV 83

Query: 72  AVDVEGRCYTWGRNERGQLG---------HGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           A+D  G  + WGRN    LG         + D  +R     ++     +   A  GR HT
Sbjct: 84  AIDYHGVAWLWGRNGSSCLGVDSETTPALYCDSPRRLTAAELNAPRGTRFVHAALGRHHT 143

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE--------PSPVRCLVSEVTATACGADFTV 174
           ++V   G   + G N   Q G    ++EI+        P+ +      +   + G  F+ 
Sbjct: 144 LLVGSGGQVWSAGLNALAQCGHPPSKSEIKTFTLIENLPT-LNGKPDRIVQASAGITFSA 202

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+  E   +   G  ++GQLG+G   E    +   K+ ++    P  I  L G+ + ++
Sbjct: 203 LLT--ESGRVYTFGSGEHGQLGNGRTGEQLGLNR--KIVFDVVEEPAPIQGLDGKHVEQI 258

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-FQRNNVLPPEAVISAG 293
           A G  H++A+   G VYTWG GGY R G   Q+     + V   F   +       + AG
Sbjct: 259 ASGNQHSIALTKDGLVYTWGSGGYCRTGLSNQETAMTAKLVSAPFTGEHEETRAWKVFAG 318

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGD-----DWMYPKPLMDLSGWNLRCMDSGNMHHF---- 344
             NS        L++ GK K  GD      +   K + DL+   +    SG + HF    
Sbjct: 319 PTNSIVIDRQRMLWICGKWKLTGDGSAGATYTTFKHINDLTACKVVTAASGGVTHFAVCP 378

Query: 345 -------VGADSSCI-SWG-HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
                    AD++ I +WG +A +GELG G     S+  P K++ L+G+ VI+VA G  H
Sbjct: 379 DDEPAEDAPADATMIVAWGQNASHGELGLGNDAPLSATKPAKIEPLQGVQVIAVAAGQ-H 437

Query: 396 SLVIVDR 402
           S V + +
Sbjct: 438 STVFLAK 444


>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Callithrix jacchus]
          Length = 577

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 142/298 (47%), Gaps = 30/298 (10%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 92  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 147

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 148 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 207

Query: 140 GQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQ+GSGS  N+  P+P R   CL ++V  T ACG      ++ V+   +   G    GQL
Sbjct: 208 GQVGSGSTVNQ--PTPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQL 263

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG 
Sbjct: 264 GLGNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGA 309

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
             YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 310 NSYGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 364



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 128/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G   +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 61  SLCSEEELQLIRQACVFGGAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 120

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 121 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 165

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++  PRRV 
Sbjct: 166 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPTPRRVT 225

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 226 GCLQNKVV---VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 282

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 283 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 332


>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
 gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 2 [Bos taurus]
          Length = 527

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL S+V    ACG      ++ V    +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTGEVFVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     +++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N              A 
Sbjct: 71  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTN--------------AG 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              ++ V+     I+ G + S      G++++WG   N     G     P P  +  L G
Sbjct: 176 GCLQSKVV---VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 289

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 290 AACHSAHT 297


>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 579

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 155/368 (42%), Gaps = 33/368 (8%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIV 104
           SP  +    G  I  VA G    H +AV   G    WG N  GQLG G  I     P  V
Sbjct: 83  SPVSVNVPAGTTITAVAGGA--GHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPVAV 140

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
              +   +     G  H + VT  G +LA+G N  GQLG GS      P  V     + +
Sbjct: 141 DVPAGTTVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTTRSRTPVAVNVPAGTTI 200

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           TA A G   ++ ++S   A  L  G    GQLG GT       DSS+ +A +        
Sbjct: 201 TAVAAGQGHSLAVTSAGTA--LAWGDNSSGQLGDGT-----ATDSSIPVAADVP------ 247

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
              AG TI  VA G  H++A+ S G V  WG  G G+LG         P  VDV     V
Sbjct: 248 ---AGTTITAVAAGGLHSLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTV 304

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMD 337
                 ++AG  +S      G +  WG       GD        P  +   +G  +  + 
Sbjct: 305 ----TAVAAGGRHSLAVTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVA 360

Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +G+ H   V +  + ++WG   +G+LG G     SS +P  VD+  G  V ++A G  HS
Sbjct: 361 TGSGHSLAVTSTDTALAWGDNTFGQLGDG--STTSSIIPVAVDLPAGTTVTAIAGGSFHS 418

Query: 397 LVIVDRTN 404
           L IV  T+
Sbjct: 419 LAIVPSTS 426



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 148/350 (42%), Gaps = 34/350 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R +A G  S    A    G    WG N  G+LG G       P  V+  +   I     G
Sbjct: 45  RVLAQGVPSA---AAGPPGTGLAWGTNSAGRLGDGTTTDSSSPVSVNVPAGTTITAVAGG 101

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
             H++ VT  G +LA+G N  GQLG G +I +   P  V     + VTA + G    + +
Sbjct: 102 AGHSLAVTSAGTALAWGDNAFGQLGDGTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAV 161

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +S   A  L  G   +GQLG G+     T              P A+   AG TI  VA 
Sbjct: 162 TSAGTA--LAWGDNFWGQLGDGSTTRSRT--------------PVAVNVPAGTTITAVAA 205

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G  H++AV S G    WG    G+LG     D  +P   DV     +      ++AG ++
Sbjct: 206 GQGHSLAVTSAGTALAWGDNSSGQLGDGTATDSSIPVAADVPAGTTI----TAVAAGGLH 261

Query: 297 SSCTAGGGQLYMWGKLKN----NGDDWMYPKPL-MDL-SGWNLRCMDSGNMHHF-VGADS 349
           S     GG +  WG   +    +G       P+ +D+ +G  +  + +G  H   V +  
Sbjct: 262 SLALTSGGDVLAWGANGSGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAGGRHSLAVTSAG 321

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             ++WG    G+LG G     S+  P  V++  G  + +VA G GHSL +
Sbjct: 322 DVLAWGDNTAGQLGDGSTTHSST--PVAVNVPAGTTITAVATGSGHSLAV 369



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/159 (33%), Positives = 68/159 (42%), Gaps = 14/159 (8%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVA 72
             GG++L      W A G   G L DG   S   P  +    G  +  VAAG    H +A
Sbjct: 266 TSGGDVL-----AWGANG--SGQLGDGTTTSSSTPVAVDVPAGTTVTAVAAG--GRHSLA 316

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
           V   G    WG N  GQLG G       P  V+  +   I     G  H++ VT    +L
Sbjct: 317 VTSAGDVLAWGDNTAGQLGDGSTTHSSTPVAVNVPAGTTITAVATGSGHSLAVTSTDTAL 376

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGA 170
           A+G N  GQLG GS  + I P  V     + VTA A G+
Sbjct: 377 AWGDNTFGQLGDGSTTSSIIPVAVDLPAGTTVTAIAGGS 415


>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 443

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 144/305 (47%), Gaps = 51/305 (16%)

Query: 34  GRRKGALDG-------NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
           G+ KG + G       N+  P R+  L+G  I+ ++  C   H  AV  +G  YTWG  E
Sbjct: 107 GKNKGGILGHEDRLSFNMTQPERIEKLLGKKIKQIS--CGQFHMAAVTEDGEVYTWGNKE 164

Query: 87  RGQLGHGDKIQRDR-------------------PTIVSELSKYKIKKAGAGRSHTVVVTE 127
            G+LGH +++++++                   P  +  L   K K+   G   TVV++E
Sbjct: 165 FGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSE 224

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    FG+N++G LG  S +N +    +   ++++   + G  F   ++  +   +   
Sbjct: 225 DGKVYTFGYNQYGSLGYVSDQNSVTTPQLIKDLNDIVKISAGYSFCAAIT--KQGKLYTW 282

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAVDS 246
           G  + GQLG+ + + Y TK             P  +     + +IV V+CG N   A+  
Sbjct: 283 GNNRNGQLGN-SQSLYQTK-------------PSIVTGFGSQNSIVDVSCGDNFIAALTQ 328

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
           +G +YTWGFGG G+LGH  + D + PR V+  Q+  ++     I+ G  +++      QL
Sbjct: 329 QGQLYTWGFGGDGQLGHGNKSDLYAPRHVEFKQK--IIK----IACGGSHAAFITEDNQL 382

Query: 307 YMWGK 311
           Y +G+
Sbjct: 383 YQFGR 387



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 164/392 (41%), Gaps = 52/392 (13%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD- 99
           + N  +PT +  L    I+ V AG      +A+   G  Y+WG+N+ G LGH D++  + 
Sbjct: 67  ENNYYTPTEIEVLTDKKIKKVEAG--KSISMALTHNGEVYSWGKNKGGILGHEDRLSFNM 124

Query: 100 -RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS------------ 146
            +P  + +L   KIK+   G+ H   VTEDG    +G  + G+LG               
Sbjct: 125 TQPERIEKLLGKKIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKR 184

Query: 147 -------IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
                  +++ + P  +  L + +    ACG  FTV LS  E   +   G  QYG LG+ 
Sbjct: 185 GNLSHDYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLS--EDGKVYTFGYNQYGSLGYV 242

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           +D    T              P+ I  L    IVK++ G +   A+  +G +YTWG    
Sbjct: 243 SDQNSVT-------------TPQLIKDL--NDIVKISAGYSFCAAITKQGKLYTWGNNRN 287

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLK 313
           G+LG+ +   +  P  V  F   N +     +S G    +     GQLY WG     +L 
Sbjct: 288 GQLGNSQSLYQTKPSIVTGFGSQNSIVD---VSCGDNFIAALTQQGQLYTWGFGGDGQLG 344

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
           +     +Y    ++     ++    G+   F+  D+    +G    G+LG G      ++
Sbjct: 345 HGNKSDLYAPRHVEFKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASEAS 404

Query: 374 M---PKKVDILEGMHVISVACGYGHSLVIVDR 402
           +   P  V   +G  V+ V CG  H++ I   
Sbjct: 405 IRSTPNLVQYFKGKQVVDVTCGGEHTIAITQE 436



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 163/378 (43%), Gaps = 44/378 (11%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDV-EGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           + + ++G  +   A G +    +A +  E   Y+WG    GQLG  ++     PT +  L
Sbjct: 20  KKKAILGAGVCLTAGGFIYQSILANEYPETIVYSWGYGGFGQLGLQNENNYYTPTEIEVL 79

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS--IRNEIEPSPVRCLV-SEVT 164
           +  KIKK  AG+S ++ +T +G   ++G NK G LG       N  +P  +  L+  ++ 
Sbjct: 80  TDKKIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMTQPERIEKLLGKKIK 139

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD--NEYNTKDSSVKLAY---EAQPR 219
             +CG      ++  E   +   G  ++G+LGH  +   E   K     L++   +    
Sbjct: 140 QISCGQFHMAAVT--EDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSML 197

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ I +L      +VACG   TV +   G VYT+G+  YG LG+             V  
Sbjct: 198 PQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFGYNQYGSLGY-------------VSD 244

Query: 280 RNNVLPPEAV--------ISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP-LM 326
           +N+V  P+ +        ISAG    +     G+LY WG  +N    N       KP ++
Sbjct: 245 QNSVTTPQLIKDLNDIVKISAGYSFCAAITKQGKLYTWGNNRNGQLGNSQSLYQTKPSIV 304

Query: 327 DLSGWNLRCMDSGNMHHFVGA---DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
              G     +D     +F+ A        +WG    G+LG+G   +     P+ V+  + 
Sbjct: 305 TGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLGHG--NKSDLYAPRHVEFKQ- 361

Query: 384 MHVISVACGYGHSLVIVD 401
             +I +ACG  H+  I +
Sbjct: 362 -KIIKIACGGSHAAFITE 378



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/154 (33%), Positives = 67/154 (43%), Gaps = 17/154 (11%)

Query: 36  RKGALDGNLVSPTRLRPLV----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
           R G L GN  S  + +P +    G     V   C      A+  +G+ YTWG    GQLG
Sbjct: 286 RNGQL-GNSQSLYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTWGFGGDGQLG 344

Query: 92  HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG------ 145
           HG+K     P  V    K KI K   G SH   +TED     FG    GQLG G      
Sbjct: 345 HGNKSDLYAPRHVE--FKQKIIKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVASE 402

Query: 146 -SIRNEIEPSPVRCLV-SEVTATACGADFTVWLS 177
            SIR+   P+ V+     +V    CG + T+ ++
Sbjct: 403 ASIRS--TPNLVQYFKGKQVVDVTCGGEHTIAIT 434


>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
          Length = 1049

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 119/230 (51%), Gaps = 20/230 (8%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSEL 107
           R+  ++G ++  V   C + H +A+  +G  Y WG N  GQLG G     + +P  +S L
Sbjct: 129 RMIKVLGTNV-IVQIACGTEHSIALTNDGELYAWGSNREGQLGLGSYTTTEIKPKRISTL 187

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
           +   I     G  HT+V+++ G   ++G N  GQLG   ++    P  +R L  ++V   
Sbjct: 188 AAVPIAFIACGGYHTIVISKSGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTLRNAKVCYA 247

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
            CG +F+V+L+   G     AG+  YGQLGHG     NT +  +         PR +  L
Sbjct: 248 TCGEEFSVFLTMDGGVFTCGAGM--YGQLGHG-----NTTNEIL---------PRQVMEL 291

Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            G T+ +++CG  HT+A V S+G VY WG GG G+LG+R  +    P+ V
Sbjct: 292 MGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVV 341



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 160/351 (45%), Gaps = 33/351 (9%)

Query: 23  LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           +FC GST    +G   G  D N+  P  +  +   ++  +A G    + VA+  EG+ Y+
Sbjct: 1   MFCWGSTIHGELGL-GGIEDENIFMPREVDFIEASNVEQIACG--ENYTVAITKEGKVYS 57

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
            G N+ GQLGH     R R  ++  L  +  +K   G  HT+ V E G   ++G N +GQ
Sbjct: 58  CGNNDYGQLGHEKA--RKRLQLIPGLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMNGQ 115

Query: 142 LGSGSIR-NEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG  S+   E  P  ++ L  + +   ACG + ++ L++     +   G  + GQLG G+
Sbjct: 116 LGLNSVDCTERVPRMIKVLGTNVIVQIACGTEHSIALTN--DGELYAWGSNREGQLGLGS 173

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
              Y T           + +P+ I+ LA   I  +ACG  HT+ +   G V++WG   +G
Sbjct: 174 ---YTT----------TEIKPKRISTLAAVPIAFIACGGYHTIVISKSGAVFSWGRNTFG 220

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTAGGGQLYMWGKLKN- 314
           +LG  + +   +P ++   +   V       E  +         T G G   M+G+L + 
Sbjct: 221 QLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAG---MYGQLGHG 277

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
           N  + + P+ +M+L G  +  +  G  H    V +     +WG    G+LG
Sbjct: 278 NTTNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 142/332 (42%), Gaps = 34/332 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + WG    G+LG G     +   P  V  +    +++   G ++TV +T++G   + G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGNN 61

Query: 138 KHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG    R  ++  P +   V      ACG   T  L+  E   + + G    GQLG
Sbjct: 62  DYGQLGHEKARKRLQLIPGLDAFV--FRKIACGNCHT--LAVNEWGQLFSWGCNMNGQLG 117

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
                  N+ D + ++       PR I  L    IV++ACGT H++A+ + G +Y WG  
Sbjct: 118 ------LNSVDCTERV-------PRMIKVLGTNVIVQIACGTEHSIALTNDGELYAWGSN 164

Query: 257 GYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
             G+LG       E  P+R+          P A I+ G  ++   +  G ++ WG+    
Sbjct: 165 REGQLGLGSYTTTEIKPKRISTLAA----VPIAFIACGGYHTIVISKSGAVFSWGRNTFG 220

Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYG 368
               N+      P  L  L    +     G     F+  D    + G   YG+LG+G   
Sbjct: 221 QLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHG--N 278

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 279 TTNEILPRQVMELMGSTVTQISCGKRHTLALV 310



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 77/161 (47%), Gaps = 4/161 (2%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G+     + P R+  L  V I F+A G    H + +   G  ++WGRN  GQLG  D  Q
Sbjct: 172 GSYTTTEIKPKRISTLAAVPIAFIACG--GYHTIVISKSGAVFSWGRNTFGQLGLNDVQQ 229

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R+ P  +  L   K+  A  G   +V +T DG     G   +GQLG G+  NEI P  V 
Sbjct: 230 RNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVM 289

Query: 158 CLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            L+ S VT  +CG   T+ L    G  +   GL   GQLG+
Sbjct: 290 ELMGSTVTQISCGKRHTLALVPSRG-RVYAWGLGGAGQLGN 329



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           WG   +GELG G    ++  MP++VD +E  +V  +ACG  +++ I     V
Sbjct: 4   WGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKV 55



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 46/168 (27%), Positives = 69/168 (41%), Gaps = 21/168 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDE--WVPRRVDVFQRNNVLP-------PEAVISAGSVNSSCT 300
           ++ WG   +G LG    +DE  ++PR VD  + +NV           A+   G V S   
Sbjct: 1   MFCWGSTIHGELGLGGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKVYSCGN 60

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
              GQL   G  K      + P     L  +  R +  GN H   V       SWG    
Sbjct: 61  NDYGQL---GHEKARKRLQLIP----GLDAFVFRKIACGNCHTLAVNEWGQLFSWGCNMN 113

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           G+LG       +  +P+ + +L    ++ +ACG  HS+ +   TN GE
Sbjct: 114 GQLGLNSV-DCTERVPRMIKVLGTNVIVQIACGTEHSIAL---TNDGE 157


>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 743

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 164/360 (45%), Gaps = 46/360 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++R L G     +A    S H +AV  +G  + WG N  G+ G G    R  P  V  
Sbjct: 339 PVQVRGLSG----GMAVTAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRASPVQVQG 394

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L         AG +H++    DG+  A+G N  GQLG G+ RN   P  V+ L S V A 
Sbjct: 395 LGGGV--AVAAGFNHSLAARSDGSVWAWGSNDSGQLGDGTTRNSTSPVQVQGL-SGVVAV 451

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G D ++ L S    S+   G   YGQLG GT                   R   +  L
Sbjct: 452 AAGFDHSLALRS--DGSVWAWGSNAYGQLGEGTTTN----------------RLVPVQVL 493

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
           +G  +V VA G+NH++AV S G V+TWG   YG+LG     +  VP +V        L  
Sbjct: 494 SG--VVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQV------QGLSG 545

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGN 340
            A ++AGS +S      G ++ WG   +   GD    + + P  +  LSG     + +G 
Sbjct: 546 VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSG--GVAVAAGG 603

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            H   V +D +  +WG   +GELG G    +S  +P +V  L G  V++V  G  HSL +
Sbjct: 604 FHSLVVRSDGTVWTWGSNSFGELGDGTTTSRS--VPVQVQGLSG--VVAVDAGNSHSLAV 659



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 169/373 (45%), Gaps = 46/373 (12%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G R      N  SP +++ L G     VA      H +A   +G  + WG N+ GQLG G
Sbjct: 376 GERGEGTTNNRASPVQVQGLGG----GVAVAAGFNHSLAARSDGSVWAWGSNDSGQLGDG 431

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                  P  V  LS   +    AG  H++ +  DG+  A+G N +GQLG G+  N + P
Sbjct: 432 TTRNSTSPVQVQGLSG--VVAVAAGFDHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVP 489

Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
             V   +S V A A G++ +  L+     ++   G   YGQLG GT        +S +L 
Sbjct: 490 VQV---LSGVVAVAAGSNHS--LAVRSDGTVWTWGSNLYGQLGDGT--------TSNRLV 536

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P  +  L+G  +  VA G+ H++AV S G V+ WG    G LG     +  VP 
Sbjct: 537 ------PVQVQGLSG--VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPG 588

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWM----YPKPLMD 327
           RV        L     ++AG  +S      G ++ WG       GD        P  +  
Sbjct: 589 RVPG------LSGGVAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQVQG 642

Query: 328 LSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           LSG  +  +D+GN H   V +D +  +WG+  YG+LG G   ++S  +P +V  L G  V
Sbjct: 643 LSG--VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRS--VPVQVPGLSG--V 696

Query: 387 ISVACGYGHSLVI 399
           +++A G  H LV+
Sbjct: 697 VAMATGALHPLVV 709



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 113/362 (31%), Positives = 161/362 (44%), Gaps = 44/362 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +P ++  L GV    VA    S H +AV  +G  + WG N  GQLG G    R  P 
Sbjct: 85  NHSAPVQVPGLSGV----VAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPV 140

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V  LS   +    AG S+++ V  DG   A+G N  GQLG G+  N + P  V  L S 
Sbjct: 141 RVQGLSG--VVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTSNRLVPVQVPGL-SG 197

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V + A G+  +  L+ +   S+   G    GQLG GT                 +  P  
Sbjct: 198 VVSVAAGSSHS--LAVLSDGSVWAWGANSSGQLGDGTKIN--------------RLVPVQ 241

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L+G   V       H++AV S G V+TWG   +G+LG   + D  VP RV     + 
Sbjct: 242 VPGLSGVVAVAAGA--AHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGL--SG 297

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCM 336
           V+  +     GS +S      G ++ WG   +   GDD       P  +  LSG     +
Sbjct: 298 VVASD----VGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTSRSVPVQVRGLSG--GMAV 351

Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
            +G+ H   VG+D +  +WG    GE G G    ++S  P +V  L G   ++VA G+ H
Sbjct: 352 TAGSSHSLAVGSDGTVWAWGSNFSGERGEGTTNNRAS--PVQVQGLGGG--VAVAAGFNH 407

Query: 396 SL 397
           SL
Sbjct: 408 SL 409



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 113/259 (43%), Gaps = 41/259 (15%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           RL P V V    VA    S H +AV  +G  +TWG N  GQLG G    R  P  V  LS
Sbjct: 486 RLVP-VQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGLS 544

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
              +    AG  H++ V  DG+  A+G N  G+LG G+  N + P  V  L   V   A 
Sbjct: 545 G--VAAVAAGSFHSLAVHSDGSVWAWGSNSSGELGDGTTSNRLVPGRVPGLSGGVAVAAG 602

Query: 169 G-------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           G       +D TVW            G   +G+LG GT     T   SV         P 
Sbjct: 603 GFHSLVVRSDGTVW----------TWGSNSFGELGDGT-----TTSRSV---------PV 638

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD----- 276
            +  L+G  +V V  G +H++AV S G V+TWG+  YG+LG        VP +V      
Sbjct: 639 QVQGLSG--VVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLSGV 696

Query: 277 VFQRNNVLPPEAVISAGSV 295
           V      L P  V S G+V
Sbjct: 697 VAMATGALHPLVVRSDGTV 715



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 108/361 (29%), Positives = 165/361 (45%), Gaps = 51/361 (14%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P+R R         +AAG  S + +A+  +G  +  G N+ GQLG G       P  V 
Sbjct: 45  APSRAR---------LAAG--SSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVP 93

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            LS   +    AG SH++ V  DG   A+G N  GQLG G+    + P  V+ L S V +
Sbjct: 94  GLS--GVVAVAAGSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGL-SGVVS 150

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G+ ++  L+     ++   G    GQLG GT        +S +L       P  +  
Sbjct: 151 VAAGSSYS--LAVRSDGTVWAWGSNFSGQLGDGT--------TSNRLV------PVQVPG 194

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L+G  +V VA G++H++AV S G V+ WG    G+LG   + +  VP +V        L 
Sbjct: 195 LSG--VVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINRLVPVQVP------GLS 246

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD----DWMYPKPLMDLSGWNLRCMDSG 339
               ++AG+ +S      G ++ WG       GD    D + P  +  LSG  +   D G
Sbjct: 247 GVVAVAAGAAHSLAVRSDGTVWTWGANSFGQLGDGTKSDRLVPVRVQGLSG--VVASDVG 304

Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
           + H   + +D S  +WGH   G+L  G     S ++P +V  L G   ++V  G  HSL 
Sbjct: 305 SYHSLALRSDGSVWAWGHNSSGQL--GDDSSTSRSVPVQVRGLSGG--MAVTAGSSHSLA 360

Query: 399 I 399
           +
Sbjct: 361 V 361



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 146/330 (44%), Gaps = 42/330 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  SP +++ L GV    VAAG    H +A+  +G  + WG N  GQLG G    R  P 
Sbjct: 435 NSTSPVQVQGLSGV--VAVAAGF--DHSLALRSDGSVWAWGSNAYGQLGEGTTTNRLVPV 490

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V       +    AG +H++ V  DG    +G N +GQLG G+  N + P  V+ L S 
Sbjct: 491 QVLS----GVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTSNRLVPVQVQGL-SG 545

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V A A G+  +  L+     S+   G    G+LG GT        +S +L       P  
Sbjct: 546 VAAVAAGSFHS--LAVHSDGSVWAWGSNSSGELGDGT--------TSNRLV------PGR 589

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L+G   V VA G  H++ V S G V+TWG   +G LG        VP +V       
Sbjct: 590 VPGLSGG--VAVAAGGFHSLVVRSDGTVWTWGSNSFGELGDGTTTSRSVPVQV------Q 641

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWM----YPKPLMDLSGWNLRCM 336
            L     + AG+ +S      G ++ WG       GD        P  +  LSG  +  M
Sbjct: 642 GLSGVVAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPGLSG--VVAM 699

Query: 337 DSGNMHHFV-GADSSCISWGHAQYGELGYG 365
            +G +H  V  +D +  +WG+  +G+LG G
Sbjct: 700 ATGALHPLVVRSDGTVWAWGYNSFGQLGNG 729



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L GV    VA    + H +AV  +G  +TWG N  GQLG G   +R  P  V  
Sbjct: 637 PVQVQGLSGV----VAVDAGNSHSLAVRSDGTVWTWGYNSYGQLGDGTTTRRSVPVQVPG 692

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
           LS       GA   H +VV  DG   A+G+N  GQLG+GS
Sbjct: 693 LSGVVAMATGA--LHPLVVRSDGTVWAWGYNSFGQLGNGS 730



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 83/180 (46%), Gaps = 19/180 (10%)

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
           ++A G+++++A+   G V+  G    G+LG     +   P +V        L     ++A
Sbjct: 50  RLAAGSSYSLALRPDGTVWATGSNDLGQLGDGTTTNHSAPVQVPG------LSGVVAVAA 103

Query: 293 GSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCMDSGNMHHF-V 345
           GS +S      G ++ WG   +   GD      + P  +  LSG  +  + +G+ +   V
Sbjct: 104 GSSHSLAVRHDGTVWAWGSNSDGQLGDGTTTMRLTPVRVQGLSG--VVSVAAGSSYSLAV 161

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +D +  +WG    G+LG G    +   +P +V  L G  V+SVA G  HSL ++   +V
Sbjct: 162 RSDGTVWAWGSNFSGQLGDGTTSNR--LVPVQVPGLSG--VVSVAAGSSHSLAVLSDGSV 217


>gi|426236323|ref|XP_004012119.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Ovis aries]
          Length = 527

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLTGKKIACLSYGS-GPHIVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V    +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTGEVFVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     +++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N              A 
Sbjct: 71  LTGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTN--------------AG 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++++WG   N     G     P P  +  L G
Sbjct: 176 GCLQNKVV---VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 289

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 290 AACHSAHT 297


>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Ailuropoda melanoleuca]
          Length = 551

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V    +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  IAAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V + +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPAPV-IVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 136/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + + +VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V      I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKV---AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    I+E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---IVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSAHT 321


>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
          Length = 4305

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 126/265 (47%), Gaps = 19/265 (7%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            PT L  +  V I  VA      HC+A+  +G  Y+WG  E G+LGHG+++  DRP +++ 
Sbjct: 4027 PTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITA 4086

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
            LS  ++     G +H+  +T  G    +G  ++G+LG G   +++ P  V  L S  V  
Sbjct: 4087 LSGLEVVCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQLIPKLVEALSSFRVID 4146

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             ACG+     L   +  ++ + G   YG+LG G                E    P  I  
Sbjct: 4147 VACGSGDAQTLCITDDDNVWSWGDGDYGKLGRG--------------GSEGCKLPMRIDC 4192

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            L G  ++KV CG+  +VA+   G VYTWG G Y RLGH   +    P RV   Q   ++ 
Sbjct: 4193 LKGLRVIKVECGSQFSVALCQCGSVYTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVS 4252

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWG 310
                I+ GS++       G++Y WG
Sbjct: 4253 ----IATGSLHCVACTDTGEVYTWG 4273



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 147/343 (42%), Gaps = 40/343 (11%)

Query: 78   RCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
            + + WG N++ QLG   G K++   P     LS  +      G     +V+ DG   A G
Sbjct: 3058 KVFVWGLNDKDQLGGVKGSKVKV--PVFSPALSALRPVHIAGGSKTLFIVSHDGKLFACG 3115

Query: 136  WNKHGQLGSGSIRN----EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
               +G+LG G   N       P     LV  V   + G      L+      + + G  +
Sbjct: 3116 EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHA---LALTADGKVYSWGEGE 3172

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
             G+LGHG            ++  EA   PR I +LAGE ++ +ACG+ H+  V ++G++Y
Sbjct: 3173 DGKLGHGN-----------RITLEA---PRLIESLAGERVISIACGSAHSACVTARGHLY 3218

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
            TWG G YGRLGH +   + VP+ V+      V+     ++ GS ++   A    G+++ W
Sbjct: 3219 TWGLGEYGRLGHGDDNIQLVPKMVEALANYRVIQ----VACGSRDAQTLALTACGKVFSW 3274

Query: 310  -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
                 GKL   G D    P  +  L+   +  ++ G      +  D    +WG   Y  L
Sbjct: 3275 GDGDFGKLGRGGSDGCAIPMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGDYFRL 3334

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+G         P  V+ L G  VI VA G  H L +     V
Sbjct: 3335 GHG--CDAHVRRPTLVEALRGRRVIHVAVGALHCLAVTSENQV 3375



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 149/336 (44%), Gaps = 30/336 (8%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQLG  +  +   PT    L+     +   G      VT DG   A G+   
Sbjct: 3954 YGWGHNHRGQLGGVEGAKVRTPTPCHALAALNPVQLVGGEQTLFAVTPDGKVYATGYGAG 4013

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G I +  +P+ +  +    +T  AC +     L+      + + G  + G+LGHG
Sbjct: 4014 GRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHG 4073

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                Y+              RP+ I AL+G  +V +ACG  H+  + ++G +YTWG G Y
Sbjct: 4074 NRVSYD--------------RPKLITALSGLEVVCIACGGAHSACLTARGRIYTWGKGRY 4119

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLK 313
            GRLGH + +D+ +P+ V+      V+  +    +G   + C      ++ W     GKL 
Sbjct: 4120 GRLGHGDSEDQLIPKLVEALSSFRVI--DVACGSGDAQTLCITDDDNVWSWGDGDYGKLG 4177

Query: 314  NNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHAQYGELGYGPYGQ 369
              G +    P  +  L G  +  ++ G+   F  A   C    +WG   Y  LG+G Y  
Sbjct: 4178 RGGSEGCKLPMRIDCLKGLRVIKVECGS--QFSVALCQCGSVYTWGKGDYHRLGHGSY-- 4233

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +    P +V  ++G  ++S+A G  H +   D   V
Sbjct: 4234 EHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEV 4269



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 116/250 (46%), Gaps = 25/250 (10%)

Query: 42   GNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
            GN VS   P  +  L G+++  V   C   H   +   GR YTWG+   G+LGHGD   +
Sbjct: 4073 GNRVSYDRPKLITALSGLEV--VCIACGGAHSACLTARGRIYTWGKGRYGRLGHGDSEDQ 4130

Query: 99   DRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              P +V  LS +++     G+G + T+ +T+D N  ++G   +G+LG G       P  +
Sbjct: 4131 LIPKLVEALSSFRVIDVACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSEGCKLPMRI 4190

Query: 157  RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
             CL    V    CG+ F+V L   +  S+   G   Y +LGHG+              YE
Sbjct: 4191 DCLKGLRVIKVECGSQFSVAL--CQCGSVYTWGKGDYHRLGHGS--------------YE 4234

Query: 216  AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               RP  +  + G+ IV +A G+ H VA    G VYTWG    G+LG         PR +
Sbjct: 4235 HVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDEGQLGDGTTLAAQRPRLL 4294

Query: 276  DVFQRNNVLP 285
               Q  N++P
Sbjct: 4295 MALQV-NIIP 4303



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGR 78
            G+L  CG    +    R G    N VS  R  P L  V +R VA      H +A+  +G+
Sbjct: 3109 GKLFACG----EGTNGRLGLGHSNNVSTPRANPYLSHVLVRRVAVHSGGKHALALTADGK 3164

Query: 79   CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
             Y+WG  E G+LGHG++I  + P ++  L+  ++     G +H+  VT  G+   +G  +
Sbjct: 3165 VYSWGEGEDGKLGHGNRITLEAPRLIESLAGERVISIACGSAHSACVTARGHLYTWGLGE 3224

Query: 139  HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            +G+LG G    ++ P  V  L +  V   ACG+     L+      + + G   +G+LG 
Sbjct: 3225 YGRLGHGDDNIQLVPKMVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGR 3284

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G  +                  P  +  L    + +V CG   ++A+   G V+TWG G 
Sbjct: 3285 GGSDGCAI--------------PMNVERLNSLGVTQVECGAQFSLALTRDGEVWTWGKGD 3330

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLGH        P  V+  +   V+     ++ G+++        Q++ WG
Sbjct: 3331 YFRLGHGCDAHVRRPTLVEALRGRRVIH----VAVGALHCLAVTSENQVWAWG 3379



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 100/224 (44%), Gaps = 21/224 (9%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
             L +P  +  L G   R ++  C S H   V   G  YTWG  E G+LGHGD   +  P 
Sbjct: 3183 TLEAPRLIESLAGE--RVISIACGSAHSACVTARGHLYTWGLGEYGRLGHGDDNIQLVPK 3240

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L+ Y++ +   G   + T+ +T  G   ++G    G+LG G       P  V  L 
Sbjct: 3241 MVEALANYRVIQVACGSRDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERLN 3300

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S  VT   CGA F++ L+      +   G   Y +LGHG D                  R
Sbjct: 3301 SLGVTQVECGAQFSLALT--RDGEVWTWGKGDYFRLGHGCDAHVR--------------R 3344

Query: 220  PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            P  + AL G  ++ VA G  H +AV S+  V+ WG   +G+ G+
Sbjct: 3345 PTLVEALRGRRVIHVAVGALHCLAVTSENQVWAWGDNDHGQQGN 3388



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 37/268 (13%)

Query: 66  VSCHCVAVDVEGR-----CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VSCH +      R      ++WG  E G+LGHGD   RD P  +  L+ +++ +  AG +
Sbjct: 528 VSCHSLGRHYLCRSSCGGAWSWGIGEDGRLGHGDTAARDAPQPLHHLAHHEVVRVAAGLA 587

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
            + V+T  G    +G    G+LG G+I N + P PV        A        V L   E
Sbjct: 588 CSAVITSRGALYTWGRGAQGRLGHGTIENCLTPQPV-----SFNAHNIERIIDVALGWGE 642

Query: 181 GASIL---NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           G+++       +  +G+   GT                    PRA++ALA   + +V  G
Sbjct: 643 GSTLCCTWEGAVQVFGEGEAGT--------------------PRALSALAMFRVTRVYTG 682

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            +   A+   G VYTWG G   RLGH   +   +P+ V+  Q   ++     +S G+ + 
Sbjct: 683 EHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVD----LSLGASHG 738

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
              +  G L++WG  +        P+P+
Sbjct: 739 IALSSEGVLFVWGTHERTQISNPVPQPV 766



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/306 (26%), Positives = 136/306 (44%), Gaps = 32/306 (10%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
            AV  +G+ Y  G    G+LG G      +PT+++ +    I K    +G  H + ++ DG
Sbjct: 3998 AVTPDGKVYATGYGAGGRLGIGGIDSVSQPTLLASIQHVFITKVACNSGGKHCLALSADG 4057

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAG 188
               ++G  + G+LG G+  +   P  +  L   EV   ACG   +  L++     I   G
Sbjct: 4058 EVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEVVCIACGGAHSACLTA--RGRIYTWG 4115

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              +YG+LGHG        DS      E Q  P+ + AL+   ++ VACG+    T+ +  
Sbjct: 4116 KGRYGRLGHG--------DS------EDQLIPKLVEALSSFRVIDVACGSGDAQTLCITD 4161

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               V++WG G YG+LG    +   +P R+D  +   V+     +  GS  S      G +
Sbjct: 4162 DDNVWSWGDGDYGKLGRGGSEGCKLPMRIDCLKGLRVIK----VECGSQFSVALCQCGSV 4217

Query: 307  YMWGKLKNNG------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            Y WGK   +       +    P  +  + G  +  + +G++H     D+  + +WG    
Sbjct: 4218 YTWGKGDYHRLGHGSYEHVRRPMRVTGMQGKMIVSIATGSLHCVACTDTGEVYTWGDNDE 4277

Query: 360  GELGYG 365
            G+LG G
Sbjct: 4278 GQLGDG 4283



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 53/213 (24%), Positives = 100/213 (46%), Gaps = 22/213 (10%)

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G+ + G+LGHG        D++ + A      P+ +  LA   +V+VA G   +  + S+
Sbjct: 550 GIGEDGRLGHG--------DTAARDA------PQPLHHLAHHEVVRVAAGLACSAVITSR 595

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G +YTWG G  GRLGH   ++   P+ V     N     +  +  G  ++ C    G + 
Sbjct: 596 GALYTWGRGAQGRLGHGTIENCLTPQPVSFNAHNIERIIDVALGWGEGSTLCCTWEGAVQ 655

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
           ++G+ +        P+ L  L+ + +  + +G   H    D   + +WG      LG+G 
Sbjct: 656 VFGEGEAG-----TPRALSALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHG- 709

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              +S+ +PK V+ L+G+ ++ ++ G  H + +
Sbjct: 710 -NMESTKIPKLVEALQGIKIVDLSLGASHGIAL 741



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%)

Query: 65   CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
            C +   +A+  +G  +TWG+ +  +LGHG      RPT+V  L   ++     G  H + 
Sbjct: 3309 CGAQFSLALTRDGEVWTWGKGDYFRLGHGCDAHVRRPTLVEALRGRRVIHVAVGALHCLA 3368

Query: 125  VTEDGNSLAFGWNKHGQLGSGS 146
            VT +    A+G N HGQ G+G+
Sbjct: 3369 VTSENQVWAWGDNDHGQQGNGT 3390



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 10/140 (7%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G+ YTWG+ +  +LGHG+      P +V  L   KI     G SH + ++ +G  + F W
Sbjct: 693 GQVYTWGKGDGYRLGHGNMESTKIPKLVEALQGIKIVDLSLGASHGIALSSEG--VLFVW 750

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT-VWLSSVEGASILNAGLPQYGQL 195
             H +     I N + P PV+       A    +  T ++  S E    L + LP    L
Sbjct: 751 GTHERT---QISNPV-PQPVKAFNPSFKANGVSSGPTQIFAWSEENPRDLPSSLPFVIDL 806

Query: 196 GHGTDNEYNTKDSSVKLAYE 215
              +DN +   +  +++  E
Sbjct: 807 ---SDNTFKALERLLRIVVE 823


>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
           mutus]
          Length = 544

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 59  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 114

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 115 TWGHNAYSQLGNGTTNAGLVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 174

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL S+V    ACG      ++ V    +   G    GQLG 
Sbjct: 175 GQVGSGSTANQPIPRRVTGCLQSKVVVNIACGQ--MCSMAVVNTGEVFVWGYNGNGQLGL 232

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 233 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 278

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 279 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 331



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     +++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 28  SLCSEAELQLVRQACVFGSASNELLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 87

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N              A 
Sbjct: 88  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTN--------------AG 132

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 133 LVPYHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 192

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              ++ V+     I+ G + S      G++++WG   N     G     P P  +  L G
Sbjct: 193 GCLQSKVV---VNIACGQMCSMAVVNTGEVFVWGYNGNGQLGLGSSGNQPTPCRVAALQG 249

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 250 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 306

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 307 AACHSAHT 314


>gi|402901986|ref|XP_003913912.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Papio anubis]
          Length = 551

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|297274438|ref|XP_001101212.2| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
           [Macaca mulatta]
          Length = 519

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNHGLV------------ 141

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 142 --PCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 551

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
          Length = 434

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 161/334 (48%), Gaps = 42/334 (12%)

Query: 64  GCVSCHCVA---VDVEG---RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           G  S HC A   + V G   + Y+WG  + G+LG GD      P  +  L+  ++     
Sbjct: 63  GATSVHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVAC 122

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
           G +HT+V T +G   AFG N++GQ G GSI++ +EP  V  L   EV A ACGA+ ++ +
Sbjct: 123 GDTHTLVATAEGQLFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKEVVAVACGAEHSMCV 182

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PRAIAALAGETIVKV 234
           +S EG  +   G  +YG +G G                E+Q R  P     L G  + +V
Sbjct: 183 TS-EG-EVYCWGWGRYGNIGDG----------------ESQDRHLPTLAKGLEGVKVAQV 224

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            CG  H++AVD  G +YTWG+G Y +L   ++KD +VP+RV+  Q+       A ++ G 
Sbjct: 225 NCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEAVQQ------VATVAGGW 278

Query: 295 VNSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
            ++      G+L+   W K    G    +D +  + +  L+G  +  + SG  H   V  
Sbjct: 279 RHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWKHTMAVTH 338

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
                SWG    G+LG+   G + S  P ++  L
Sbjct: 339 TGKFFSWGRNVNGQLGHS--GMQDSNSPVELAAL 370



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 150/330 (45%), Gaps = 35/330 (10%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT-EDGNSLAFGWNKH 139
           +WGR E GQLGHGD   R  P  V  L          G  +++ V   D    ++GW   
Sbjct: 33  SWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATSVHCGAEYSMAVAGGDKQVYSWGWGDF 92

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG+G +++   P P+  L    V + ACG   T+ +++ EG  +   G  Q GQ G G
Sbjct: 93  GRLGTGDVKDVFIPCPLPALAGRRVASVACGDTHTL-VATAEG-QLFAFGRNQNGQCGLG 150

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                     S++   E    P+ + AL G+ +V VACG  H++ V S+G VY WG+G Y
Sbjct: 151 ----------SIQDCLE----PQLVTALQGKEVVAVACGAEHSMCVTSEGEVYCWGWGRY 196

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------KL 312
           G +G  E +D  +P      +   V    A ++ G  +S     GG +Y WG       +
Sbjct: 197 GNIGDGESQDRHLPTLAKGLEGVKV----AQVNCGWRHSIAVDEGGAMYTWGWGAYAQLM 252

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQK 370
           + +  D   PK +  +         +G   H + ADS     + G  ++G+ G G    +
Sbjct: 253 QGDRKDHYVPKRVEAV---QQVATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGH--NE 307

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                ++V+ L G  V+ V  G+ H++ + 
Sbjct: 308 DVVRVQQVEALAGERVVQVKSGWKHTMAVT 337



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/241 (27%), Positives = 105/241 (43%), Gaps = 19/241 (7%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           + + P  +  L G ++  VA  C + H + V  EG  Y WG    G +G G+   R  PT
Sbjct: 154 DCLEPQLVTALQGKEV--VAVACGAEHSMCVTSEGEVYCWGWGRYGNIGDGESQDRHLPT 211

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
           +   L   K+ +   G  H++ V E G    +GW  + QL  G  ++   P  V   V +
Sbjct: 212 LAKGLEGVKVAQVNCGWRHSIAVDEGGAMYTWGWGAYAQLMQGDRKDHYVPKRVEA-VQQ 270

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   A G   T  +++     +  +G  ++GQ G G + +                R + 
Sbjct: 271 VATVAGGWRHT--MAADSQGRLFASGWNKFGQCGVGHNEDV--------------VRVQQ 314

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           + ALAGE +V+V  G  HT+AV   G  ++WG    G+LGH   +D   P  +    R  
Sbjct: 315 VEALAGERVVQVKSGWKHTMAVTHTGKFFSWGRNVNGQLGHSGMQDSNSPVELAALSRGG 374

Query: 283 V 283
           +
Sbjct: 375 I 375



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/186 (29%), Positives = 86/186 (46%), Gaps = 17/186 (9%)

Query: 231 IVKVACGTNHTVAV---DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
           ++ +ACG++H++A+    S   V +WG G  G+LGH + +D   P+ V            
Sbjct: 9   VIGLACGSSHSLALISTPSGSMVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRGATS-- 66

Query: 288 AVISAGSVNSSCTAGGG-QLYMWG----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGN 340
             +  G+  S   AGG  Q+Y WG         GD  D   P PL  L+G  +  +  G+
Sbjct: 67  --VHCGAEYSMAVAGGDKQVYSWGWGDFGRLGTGDVKDVFIPCPLPALAGRRVASVACGD 124

Query: 341 MHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            H  V  A+    ++G  Q G+ G G    +    P+ V  L+G  V++VACG  HS+ +
Sbjct: 125 THTLVATAEGQLFAFGRNQNGQCGLGSI--QDCLEPQLVTALQGKEVVAVACGAEHSMCV 182

Query: 400 VDRTNV 405
                V
Sbjct: 183 TSEGEV 188



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 2/96 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+     + ++V   ++  L G  +  V +G    H +AV   G+ ++WGRN  GQ
Sbjct: 295 WNKFGQCGVGHNEDVVRVQQVEALAGERVVQVKSGWK--HTMAVTHTGKFFSWGRNVNGQ 352

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
           LGH      + P  ++ LS+  I      R    VV
Sbjct: 353 LGHSGMQDSNSPVELAALSRGGINTDALTRQAQPVV 388


>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
          Length = 527

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V    +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVAVNIACGQ--MCSMAVVNTGEVYVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  IAAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GSSGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V + +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPAPV-IVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 136/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + + +VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V      I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 176 GCLQNKV---AVNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    I+E   +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---IVEKDRIIEI 289

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 290 AACHSAHT 297


>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
 gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
          Length = 4220

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG +    +G   G L  N+  P ++  L    +R V+      H +A+ +EG+ 
Sbjct: 2473 GKVFACGESTNGRLGL--GPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKL 2530

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+++  D P ++       ++    G SH+  +   G    +G  ++
Sbjct: 2531 FSWGEGEDGKLGHGNRMNCDHPKLIDTFKSSCVRDMSCGSSHSAAILSSGELYTWGLGEY 2590

Query: 140  GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G     ++P  V+   S  V   ACG+     L+  +  ++ + G   +G+LG G
Sbjct: 2591 GRLGHGDNYTHLKPKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRG 2650

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                            E    P  +  L G+ + KVACG   ++A+ + G V+TWG G Y
Sbjct: 2651 --------------GSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDY 2696

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ VD  +   ++     ++ G+++       GQ++ WG
Sbjct: 2697 YRLGHGNDTHVRKPQIVDGLRGKKIVD----VAVGALHCLAVTDSGQVFAWG 2744



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 123/269 (45%), Gaps = 19/269 (7%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
             + S   L  L  V +R VA      H +A+  +G  Y+WG  + G+LGHG++   DRP 
Sbjct: 3426 TVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSWGEGDDGKLGHGNRNSCDRPR 3485

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            ++  L    +     G SH+  +T++     +G  ++G+LG G   +++ P  V  L  +
Sbjct: 3486 VIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEALRGN 3545

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             V   ACG+     L   +   + + G   YG+LG G  +                  P 
Sbjct: 3546 RVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKI--------------PM 3591

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             + +L G  + KV CG+  +VA+   G VYTWG G Y RLGH        P+RV   Q  
Sbjct: 3592 KVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGK 3651

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             V+     I+ GS++   +   G++Y WG
Sbjct: 3652 KVI----TIATGSLHCVASTDTGEVYTWG 3676



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 122/245 (49%), Gaps = 21/245 (8%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  EG  Y+WG  + G+LGHGD   R+ PT+V+ L+  ++ +   G +H+  VT +
Sbjct: 28  HFLALTREGEVYSWGSGDGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSE 87

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
           G    +G   +G+LG GS  +++ P  V  L    +   ACG+     L++ +  ++ + 
Sbjct: 88  GELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHHIIDVACGSGDAHTLAAADDGTVWSW 147

Query: 188 GLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
           G   YG+LG  G+D   N               P++I  L G  + KV CG   ++A+  
Sbjct: 148 GDGDYGKLGRGGSDGCKN---------------PKSIERLQGLGVCKVYCGAQFSLALTR 192

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G V+TWG G   RLGH  +     P+ V+     +V+     +S GS++       G++
Sbjct: 193 DGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVD----VSVGSIHCLALTDAGEV 248

Query: 307 YMWGK 311
           Y WG+
Sbjct: 249 YCWGR 253



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 150/343 (43%), Gaps = 39/343 (11%)

Query: 78   RCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
            + + WG N++ QLG   G KI+   P +   +   K+++   G      V+ DG   A G
Sbjct: 2422 KVFVWGLNDKDQLGGLKGSKIKV--PVLSEFIGALKVQQIAGGSKTLFAVSHDGKVFACG 2479

Query: 136  WNKHGQLGSGSIR-NEIEPSPVRCLVSEV---TATACGADFTVWLSSVEGASILNAGLPQ 191
             + +G+LG G +  N   P  +  L S +    +   G    + L ++EG  + + G  +
Sbjct: 2480 ESTNGRLGLGPLSANVTVPRQIENLSSFMVRKVSVHSGGRHAMAL-TIEG-KLFSWGEGE 2537

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
             G+LGHG  N  N               P+ I       +  ++CG++H+ A+ S G +Y
Sbjct: 2538 DGKLGHG--NRMNCD------------HPKLIDTFKSSCVRDMSCGSSHSAAILSSGELY 2583

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW 309
            TWG G YGRLGH +      P++V  F  + V+     I+ GS ++   A    G ++ W
Sbjct: 2584 TWGLGEYGRLGHGDNYTHLKPKKVQSFTSHRVID----IACGSRDAQTLALTDDGTVWSW 2639

Query: 310  -----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
                 GKL   G +    P P+  L G  +  +  G       + S  + +WG   Y  L
Sbjct: 2640 GDGDFGKLGRGGSEGCSVPNPVEKLQGQGVCKVACGAQFSLALSTSGLVWTWGKGDYYRL 2699

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+G         P+ VD L G  ++ VA G  H L + D   V
Sbjct: 2700 GHG--NDTHVRKPQIVDGLRGKKIVDVAVGALHCLAVTDSGQV 2740



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 33/341 (9%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA--- 133
            G  Y WG N RGQLG  +  +   P  +  L+  +  +   G      VT +G   A   
Sbjct: 3354 GTIYGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQIVGGEQTLFAVTAEGKVYATGY 3413

Query: 134  FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
                + G  G+ ++ +      ++ +V    A   G    + LS+     + + G    G
Sbjct: 3414 GHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSA--DGDVYSWGEGDDG 3471

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  N  +              RPR I AL G+ ++ ++CG +H+  +     +YTW
Sbjct: 3472 KLGHGNRNSCD--------------RPRVIEALRGKGVIDISCGGSHSACITQNHELYTW 3517

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
            G G YGRLGH + +D+ +P+ V+  + N V+  +    +G   + C      ++ W    
Sbjct: 3518 GKGRYGRLGHGDSEDQLLPKVVEALRGNRVI--DVACGSGDAQTLCLTDDDCVWSWGDGD 3575

Query: 310  -GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
             GKL   G D    P  +  L G  +  ++ G+        S  + +WG   Y  LG+G 
Sbjct: 3576 YGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGV 3635

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
                    PK+V  L+G  VI++A G   SL  V  T+ GE
Sbjct: 3636 --DDHVRRPKRVAALQGKKVITIATG---SLHCVASTDTGE 3671



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-K 95
            G L G+ +    L   +G + ++ +A G  +   V+ D  G+ +  G +  G+LG G   
Sbjct: 2435 GGLKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAVSHD--GKVFACGESTNGRLGLGPLS 2492

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  +  LS + ++K    +G  H + +T +G   ++G  + G+LG G+  N   P
Sbjct: 2493 ANVTVPRQIENLSSFMVRKVSVHSGGRHAMALTIEGKLFSWGEGEDGKLGHGNRMNCDHP 2552

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +    S  V   +CG+  +  + S     +   GL +YG+LGHG DN  + K      
Sbjct: 2553 KLIDTFKSSCVRDMSCGSSHSAAILS--SGELYTWGLGEYGRLGHG-DNYTHLK------ 2603

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                   P+ + +     ++ +ACG+    T+A+   G V++WG G +G+LG    +   
Sbjct: 2604 -------PKKVQSFTSHRVIDIACGSRDAQTLALTDDGTVWSWGDGDFGKLGRGGSEGCS 2656

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-L 325
            VP  V+  Q   V      ++ G+  S   +  G ++ WGK       +G+D    KP +
Sbjct: 2657 VPNPVEKLQGQGV----CKVACGAQFSLALSTSGLVWTWGKGDYYRLGHGNDTHVRKPQI 2712

Query: 326  MD-LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +D L G  +  +  G +H     DS    +WG   +G+ G        +  P+ V+ LEG
Sbjct: 2713 VDGLRGKKIVDVAVGALHCLAVTDSGQVFAWGDNDHGQQGNN--TTTVNRRPQLVNGLEG 2770

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 2771 QKITRVACGSSHSI 2784



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 31/260 (11%)

Query: 153 PSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
           P+ + CL    E+       D   +L+      + + G    G+LGHG            
Sbjct: 5   PAELECLSRKCEIVQVVTHTDGKHFLALTREGEVYSWGSGDGGKLGHG------------ 52

Query: 211 KLAYEAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
               +  PR  P  +  LAG+ +++++CG+ H+ AV S+G +YTWG G YGRLGH   +D
Sbjct: 53  ----DTSPREEPTLVTGLAGKQVIRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSED 108

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDD-WMYP 322
           + VP  V   + ++++  +    +G  ++   A  G ++ WG     KL   G D    P
Sbjct: 109 QLVPVLVSGLRGHHII--DVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNP 166

Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           K +  L G  +  +  G      +  D S  +WG  +   LG+G   +     PK V+ L
Sbjct: 167 KSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGEGFRLGHG--TEDHVRHPKLVEAL 224

Query: 382 EGMHVISVACGYGHSLVIVD 401
           +G HV+ V+ G  H L + D
Sbjct: 225 DGKHVVDVSVGSIHCLALTD 244



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 106/239 (44%), Gaps = 22/239 (9%)

Query: 51   RPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            RP V   +R      +SC   H   +      YTWG+   G+LGHGD   +  P +V  L
Sbjct: 3483 RPRVIEALRGKGVIDISCGGSHSACITQNHELYTWGKGRYGRLGHGDSEDQLLPKVVEAL 3542

Query: 108  SKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
               ++     G+G + T+ +T+D    ++G   +G+LG G       P  V  L+   V+
Sbjct: 3543 RGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLGVS 3602

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
               CG+ F+V L+     ++   G   Y +LGHG D+                 RP+ +A
Sbjct: 3603 KVECGSQFSVALT--RSGAVYTWGKGDYYRLGHGVDDHVR--------------RPKRVA 3646

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            AL G+ ++ +A G+ H VA    G VYTWG    G+LG         PR V   Q   +
Sbjct: 3647 ALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLVTALQGKKI 3705



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/219 (31%), Positives = 102/219 (46%), Gaps = 21/219 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT +  L G  +  +   C S H  AV  EG  YTWGR   G+LGHG    +  P +VS 
Sbjct: 60  PTLVTGLAGKQV--IRISCGSTHSAAVTSEGELYTWGRGNYGRLGHGSSEDQLVPVLVSG 117

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
           L  + I     G+G +HT+   +DG   ++G   +G+LG G       P  +  L    V
Sbjct: 118 LRGHHIIDVACGSGDAHTLAAADDGTVWSWGDGDYGKLGRGGSDGCKNPKSIERLQGLGV 177

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CGA F++ L+     S+   G  +  +LGHGT++                  P+ +
Sbjct: 178 CKVYCGAQFSLALT--RDGSVWTWGKGEGFRLGHGTEDHVR--------------HPKLV 221

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            AL G+ +V V+ G+ H +A+   G VY WG    G+LG
Sbjct: 222 EALDGKHVVDVSVGSIHCLALTDAGEVYCWGRNDQGQLG 260



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 78/168 (46%), Gaps = 13/168 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  + P ++  L+G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 3581 RGGSDGCKI-PMKVESLIGLGVSKVE--CGSQFSVALTRSGAVYTWGKGDYYRLGHGVDD 3637

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V+ L   K+     G  H V  T+ G    +G N  GQLG G+      P  V
Sbjct: 3638 HVRRPKRVAALQGKKVITIATGSLHCVASTDTGEVYTWGDNDEGQLGDGTTNAIARPRLV 3697

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAG-LP-----QYGQLGH 197
              L   +++  ACG+  T+  S+ +    +NAG LP     +Y  L H
Sbjct: 3698 TALQGKKISRVACGSAHTIAWSTCKP---VNAGRLPDEVPMEYNHLQH 3742



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 81/198 (40%), Gaps = 17/198 (8%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L G  +  VA G      + +  +   ++WG  + G+LG G       P  V  
Sbjct: 3536 PKVVEALRGNRVIDVACGSGDAQTLCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVES 3595

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
            L    + K   G   +V +T  G    +G   + +LG G   +   P  V  L   +V  
Sbjct: 3596 LIGLGVSKVECGSQFSVALTRSGAVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKKVIT 3655

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             A G+   V  +S +   +   G    GQLG GT N              A  RPR + A
Sbjct: 3656 IATGSLHCV--ASTDTGEVYTWGDNDEGQLGDGTTN--------------AIARPRLVTA 3699

Query: 226  LAGETIVKVACGTNHTVA 243
            L G+ I +VACG+ HT+A
Sbjct: 3700 LQGKKISRVACGSAHTIA 3717



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C +   +A+  +G  +TWG+ E  +LGHG +     P +V  L    +     G  H + 
Sbjct: 182 CGAQFSLALTRDGSVWTWGKGEGFRLGHGTEDHVRHPKLVEALDGKHVVDVSVGSIHCLA 241

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
           +T+ G    +G N  GQLG    +   EP+ V  L S+ +   ACG
Sbjct: 242 LTDAGEVYCWGRNDQGQLGDIDCQIRPEPTLVSGLASKGIVGIACG 287


>gi|402901988|ref|XP_003913913.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Papio anubis]
 gi|355754693|gb|EHH58594.1| hypothetical protein EGM_08474 [Macaca fascicularis]
          Length = 556

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 245 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 145 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G     P P  +  L G
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 261

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 262 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|326914164|ref|XP_003203397.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Meleagris
           gallopavo]
          Length = 567

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P RL  L G  I  ++ G    H V    EG  YTWG N   QLG+G       P  V
Sbjct: 104 IEPKRLDSLCGKKIACLSYGS-GPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQV 162

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
           S  L   K+ +   G  H++V+T DG    +G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 163 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 222

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V    ACG   +  ++ VE   +   G    GQLG G+                 QP P 
Sbjct: 223 VVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 266

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            IAAL G  + +VACG  HT+ +  +G +Y WG   YG+LG   + ++  P  V V  ++
Sbjct: 267 RIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTV-DKD 325

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            V+   A  SA +  S+     GQ+YMWG+ +
Sbjct: 326 RVIEIAACHSAHT--SAAKTQSGQVYMWGQCR 355



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 27/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VTE+      G N  G LG+G +++ IEP  +  L   ++   + G+   V
Sbjct: 69  GSAGNEVLYVTENDEVFVLGMNCSGCLGTGDVQSTIEPKRLDSLCGKKIACLSYGSGPHV 128

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L++ EG  +   G   Y QLG+GT N                   +    L  + +++V
Sbjct: 129 VLATEEG-EVYTWGHNAYSQLGNGTTN-------------HGLVPCQVSTNLVNKKVIEV 174

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++ + S G VYTWG+   G++G     ++ +PRRV    +N V+     I+ G 
Sbjct: 175 ACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV---VNIACGQ 231

Query: 295 VNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD 348
           + S      G++Y+WG   N     G     P P  +  L G  ++ +  G  H  V  D
Sbjct: 232 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD 291

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
              I +WG   YG+LG G   + + + P  V + +   +   AC   H+
Sbjct: 292 EGQIYAWGANSYGQLGTG--NKSNQSYPTTVTVDKDRVIEIAACHSAHT 338



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 2/81 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ ++ VA GC   H + +  EG+ Y WG N  GQLG G+K  +  P
Sbjct: 260 GNQPTPCRIAALQGIRVQRVACGCA--HTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 317

Query: 102 TIVSELSKYKIKKAGAGRSHT 122
           T V+      I+ A    +HT
Sbjct: 318 TTVTVDKDRVIEIAACHSAHT 338


>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
          Length = 6906

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 122/242 (50%), Gaps = 14/242 (5%)

Query: 38   GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
            G  D  L+ P+ +  L G+ I  VAA     H +A+  +G  Y+WG N+RGQLG G  + 
Sbjct: 3201 GNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISHDGAVYSWGYNDRGQLGLGTTVS 3260

Query: 98   RDR-PTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
            +   P ++  L  KY I  A     H+ VV+ +G+ L FG N  GQLG    +++  P  
Sbjct: 3261 KSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQL 3320

Query: 156  VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            V  L S+ V   ACG   TV +  V+   + + G  +YGQLG       +T+++ V +  
Sbjct: 3321 VETLSSQKVGRVACGLYHTVAI--VDDGDVYSFGKNEYGQLGLS-----HTQNTKVPMLV 3373

Query: 215  EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKD--EW 270
            +  P PR     A    V+V CG  HTV +   G V TWG   YG+L  G +E K   ++
Sbjct: 3374 KIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQF 3433

Query: 271  VP 272
            VP
Sbjct: 3434 VP 3435



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 139/298 (46%), Gaps = 36/298 (12%)

Query: 50  LRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---GDKIQRDRPTI 103
           LRP+  +    ++++ A     H +A+   G  Y+WG N+RGQLGH   G K+    P +
Sbjct: 425 LRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQLGHENVGTKLY--LPKL 482

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SE 162
           +  + + K+K A     H+ +V+  G    FG N  GQLG    +++  P  V+ L+   
Sbjct: 483 IESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGLDHTQHQSTPQLVKALLGHH 542

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+  +CG  + + L ++ G  +   G   +GQLG G + +       VK+  +       
Sbjct: 543 VSMVSCGL-YHMVLCTISG-EVFTCGKNDHGQLGLGHNKQ-------VKVPTQ------- 586

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
              L  E +  VACG  H  A+ S G  Y++G   YG+LG   +  + +P  + +     
Sbjct: 587 -VVLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTR 645

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPLMDLSGWNLR 334
           ++      + G  ++   +  GQ++++G+     L N G+ D + P PL      N+R
Sbjct: 646 MVHA----ACGCYHTLLMSDSGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMR 699



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 142/337 (42%), Gaps = 27/337 (8%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  Y+ G+N  G+LG GD I+R + T V       I++  +G     ++T DG  L  G 
Sbjct: 348 GELYSCGQNSYGELGLGDDIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGL 407

Query: 137 NKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTVWLSSVEGASILNA-GLPQYGQ 194
           NK GQ G G+    +    P++ L S        ++    L ++    +  + G    GQ
Sbjct: 408 NKSGQCGHGNFDERVMLLRPIQALRSHRVKYINASNGCEHLIAITDTGLAYSWGYNDRGQ 467

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGH        ++   KL       P+ I ++  + +   A   +H+  V   G +YT+G
Sbjct: 468 LGH--------ENVGTKLYL-----PKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG 514

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
               G+LG    + +  P+ V     ++V    +++S G  +       G+++  GK  +
Sbjct: 515 MNDCGQLGLDHTQHQSTPQLVKALLGHHV----SMVSCGLYHMVLCTISGEVFTCGKNDH 570

Query: 315 N----GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI--SWGHAQYGELGYGPYG 368
                G +     P   +    L C  +   +H     S+ +  S+G   YG+LG G   
Sbjct: 571 GQLGLGHNKQVKVPTQVVLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKI 630

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            ++  +P  + I     ++  ACG  H+L++ D   V
Sbjct: 631 HQN--IPIALTISSNTRMVHAACGCYHTLLMSDSGQV 665



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 95/214 (44%), Gaps = 27/214 (12%)

Query: 60   FVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
            F+    VS H  AV    G   T+G N+ GQLG      +  P +V  LS  K+ +   G
Sbjct: 3276 FITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACG 3335

Query: 119  RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-------EIEPSPVRCLVSEVTATA---C 168
              HTV + +DG+  +FG N++GQLG    +N       +I P+P   ++  V       C
Sbjct: 3336 LYHTVAIVDDGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYC 3395

Query: 169  GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
            G   TV +  +E   ++  G   YGQLG G+  E+ +    V L   ++           
Sbjct: 3396 GYYHTVTI--LECGKVVTWGRNDYGQLGIGS-KEHKSIAQFVPLPLTSR----------- 3441

Query: 229  ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
              + + +CG  HT+ +   G    +G    G+LG
Sbjct: 3442 --VKRASCGCYHTLLLLVNGRPMVFGRNNKGQLG 3473



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 78/334 (23%), Positives = 130/334 (38%), Gaps = 60/334 (17%)

Query: 71   VAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGA--GRSHTVVVTE 127
            V +  +G  +T G N+ GQ G G+  +R   P+ +  LS   I    A  G  H + ++ 
Sbjct: 3179 VVLMKDGAVFTCGLNKSGQCGIGNFDERLIVPSPIPALSGIPITMVAASNGCEHMLAISH 3238

Query: 128  DGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            DG   ++G+N  GQLG G+ +     P  +  L  +   T     +           +L 
Sbjct: 3239 DGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAVSYHHSAVVSNNGDLLT 3298

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
             G+   GQLG       +T              P+ +  L+ + + +VACG  HTVA+  
Sbjct: 3299 FGMNDSGQLGLDHTQHQHT--------------PQLVETLSSQKVGRVACGLYHTVAIVD 3344

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
             G VY++G   YG+LG    ++  VP  V       + P        +VN +     G  
Sbjct: 3345 DGDVYSFGKNEYGQLGLSHTQNTKVPMLV------KIPPAPRTPMLDAVNKAVQVYCGYY 3398

Query: 307  YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
            +                         +  ++ G +          ++WG   YG+LG G 
Sbjct: 3399 H------------------------TVTILECGKV----------VTWGRNDYGQLGIGS 3424

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               KS A  + V +     V   +CG  H+L+++
Sbjct: 3425 KEHKSIA--QFVPLPLTSRVKRASCGCYHTLLLL 3456



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 19  GGELLFCGSTCWDAVG---RRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDV 75
            GE+  CG      +G    ++  +   +V P  L       + FVA G    H  A+  
Sbjct: 559 SGEVFTCGKNDHGQLGLGHNKQVKVPTQVVLPNEL-------VCFVACGYY--HATAITS 609

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
            G  Y++GRN+ GQLG G KI ++ P  ++  S  ++  A  G  HT+++++ G    FG
Sbjct: 610 TGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRMVHAACGCYHTLLMSDSGQVFVFG 669

Query: 136 WNKHGQLGSGSIRNEIEPSPVR 157
            N  GQLG+    + + P P++
Sbjct: 670 RNNKGQLGNRGNTDSLLPVPLK 691



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 49/102 (48%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            + P    P++    + V   C   H V +   G+  TWGRN+ GQLG G K  +     V
Sbjct: 3375 IPPAPRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQFV 3434

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
                  ++K+A  G  HT+++  +G  + FG N  GQLG  S
Sbjct: 3435 PLPLTSRVKRASCGCYHTLLLLVNGRPMVFGRNNKGQLGVAS 3476



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 123/296 (41%), Gaps = 42/296 (14%)

Query: 127  EDGNSLAFGWNKHGQL--GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
            E+    + G N +G+L  G  +  N++E +      S + + A G +  V L  ++  ++
Sbjct: 3131 EECEIFSCGQNNYGELCLGHCNPTNKLERASFFSYKS-IQSIAGGNEVLVVL--MKDGAV 3187

Query: 185  LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTV 242
               GL + GQ G G  +E        +L       P  I AL+G  I  VA   G  H +
Sbjct: 3188 FTCGLNKSGQCGIGNFDE--------RLIV-----PSPIPALSGIPITMVAASNGCEHML 3234

Query: 243  AVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
            A+   G VY+WG+   G+LG          PR ++  +    +   AV      +S+  +
Sbjct: 3235 AISHDGAVYSWGYNDRGQLGLGTTVSKSHTPRVIESLREKYFITFAAV---SYHHSAVVS 3291

Query: 302  GGGQLYMWGKLKNNGDDWM-------YPKPLMDLSGWNLRCMDSGNMHHFVGA--DSSCI 352
              G L  +G + ++G   +        P+ +  LS   +  +  G ++H V    D    
Sbjct: 3292 NNGDLLTFG-MNDSGQLGLDHTQHQHTPQLVETLSSQKVGRVACG-LYHTVAIVDDGDVY 3349

Query: 353  SWGHAQYGELGYG-------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            S+G  +YG+LG         P   K    P+   +      + V CGY H++ I++
Sbjct: 3350 SFGKNEYGQLGLSHTQNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILE 3405


>gi|449484061|ref|XP_002195626.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Taeniopygia
           guttata]
          Length = 526

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 132/281 (46%), Gaps = 25/281 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P RL  L G  I  ++ G    H V    EG  YTWG N   QLG+G       P  V
Sbjct: 63  IEPRRLDSLCGKKIACLSYGS-GPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQV 121

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
           S  L   K+ +   G  H++V+T DG    +G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 122 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 181

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +    ACG      ++ VE   +   G    GQLG G+                 QP P 
Sbjct: 182 IVVNIACGQ--MCSMAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 225

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            IAAL G  + +VACG  HT+ +  +G +Y WG   YG+LG   + ++  P  V V  ++
Sbjct: 226 RIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV-VVDKD 284

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
            V+   A  SA +  S+     GQ+YMWG+ +  G    +P
Sbjct: 285 RVIEIAACHSAHT--SAAKTQSGQVYMWGQCR--GQSVTFP 321



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 29/290 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  TE+      G N  G LG+G +++ IEP  +  L   ++   + G+   V
Sbjct: 28  GSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHV 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            L++ EG  +   G   Y QLG+GT N                  P  ++  L  + +++
Sbjct: 88  VLATEEG-EVYTWGHNAYSQLGNGTTNHGFV--------------PCQVSTNLVNKKVIE 132

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++H++ + S G VYTWG+   G++G     ++ +PRRV    +N ++     I+ G
Sbjct: 133 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV---VNIACG 189

Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
            + S      G++Y+WG   N     G     P P  +  L G  ++ +  G  H  V  
Sbjct: 190 QMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 249

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           D   I +WG   YG+LG G   + + + P  V + +   +   AC   H+
Sbjct: 250 DEGQIYAWGANSYGQLGTG--NKSNQSYPTTVVVDKDRVIEIAACHSAHT 297


>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
          Length = 423

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 127/273 (46%), Gaps = 23/273 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +L +P  ++ L G+ I+ +A  C   HC+AV ++G   +WGRN+ GQLG G       P 
Sbjct: 96  DLFTPQPIKALHGLRIKQIA--CGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTEDSLVPQ 153

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            +       +K   AG  HT  VTEDG    +GW ++G LG G   + + P  V  +   
Sbjct: 154 KIQAFQGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGV 213

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           ++   ACG   T+ +SS  G  +   G  +YGQLGHG               +E    P 
Sbjct: 214 KMVKVACGWRHTISVSSSGG--LYTYGWSKYGQLGHGD--------------FEDHLTPH 257

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            + AL    I +++ G  HT+A+ S G +Y WG+  +G++G  +  D   P +V      
Sbjct: 258 KLEALQENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQVKFPHEQ 317

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
            V+     IS G  ++        ++ WG+  N
Sbjct: 318 KVVH----ISCGWRHTLAVTERQNVFSWGRGTN 346



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 158/390 (40%), Gaps = 111/390 (28%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY------- 110
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S L  +       
Sbjct: 18  VLLISAG--ASHSVALLXGNVVCSWGRGEDGQLGHGDAEDRLSPTYLSALDGHEVVSVTC 75

Query: 111 ----------------------------------KIKKAGAGRSHTVVVTEDGNSLAFGW 136
                                             +IK+   G SH + VT DG   ++G 
Sbjct: 76  GADHTTAYSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQSWGR 135

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N++GQLG G+  + + P  ++      V   A GA+ T   +  E   +   G  +YG L
Sbjct: 136 NQNGQLGLGTTEDSLVPQKIQAFQGVSVKMVAAGAEHTA--AVTEDGELYGWGWGRYGNL 193

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G  N+              +  P  ++ + G  +VKVACG  HT++V S G +YT+G+
Sbjct: 194 GLGDRND--------------RLVPEKVSTVEGVKMVKVACGWRHTISVSSSGGLYTYGW 239

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
             YG+LGH + +D   P +++  Q N +    + IS G  ++      G+LY W      
Sbjct: 240 SKYGQLGHGDFEDHLTPHKLEALQENLI----SEISGGWRHTMALTSDGKLYGW------ 289

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
                         GWN                         ++G++G G      S  P
Sbjct: 290 --------------GWN-------------------------KFGQVGVGDNVDHCS--P 308

Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +V       V+ ++CG+ H+L + +R NV
Sbjct: 309 VQVKFPHEQKVVHISCGWRHTLAVTERQNV 338



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 57/118 (48%), Gaps = 2/118 (1%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P +L  L    I  ++ G    H +A+  +G+ Y WG N+ GQ+G GD +    P  V
Sbjct: 254 LTPHKLEALQENLISEISGGWR--HTMALTSDGKLYGWGWNKFGQVGVGDNVDHCSPVQV 311

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
               + K+     G  HT+ VTE  N  ++G   +GQLG G   +   P  +  L ++
Sbjct: 312 KFPHEQKVVHISCGWRHTLAVTERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSAD 369


>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
 gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Rattus norvegicus]
 gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Rattus norvegicus]
          Length = 551

 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 143/296 (48%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    +G  +
Sbjct: 66  EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  + ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMSIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G +Y WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+  + GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKSQGGHVYMWGQCR 338



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 138/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G   +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGTAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ +G  +   G   Y QLG+GT N                
Sbjct: 95  LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---MSIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   I +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSAHT 321


>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 556

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 187 GQVGSGSTINQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDSGEVYVWGYNGNGQLGL 244

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTINQPIPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
              +N V+     I+ G +        G++Y+WG        L N+G+    P P  +  
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDSGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 258

Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
           L G  ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 259 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
 gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 376

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 163/368 (44%), Gaps = 38/368 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           + R +   C S H +A+   G   +WGR E GQLGHG   Q   PT ++ L+   +    
Sbjct: 9   EARVLGVSCGSSHSIALLDCGVVASWGRGEDGQLGHGQADQCTSPTCIAALTDAGVDAVV 68

Query: 117 AGRSHTVVVTED-GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            G  +TV V    G   ++GW   G+LG G   +   P P+       V   ACG   T+
Sbjct: 69  CGAEYTVAVASSRGQIYSWGWGDFGRLGHGECGDVFVPRPIAFFSGRPVARVACGDTHTL 128

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            ++  +GA +   G  Q GQLG G  N+  +              P+ + AL GE +  V
Sbjct: 129 VVTQGDGA-LYTFGRNQNGQLGLGHTNDCLS--------------PQLVTALQGERVSSV 173

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG+ H++A    G V++WG+G YG LG  + +D + P RV       V      +  G 
Sbjct: 174 ACGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPTRVVGLDGVTVTS----VVCGW 229

Query: 295 VNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMD-SGNMHHFVGADS 349
            +S+     G+++ +G  K     +GD   + +P +     + R    +G   H + ADS
Sbjct: 230 RHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCRVSTVAGGWRHTMAADS 289

Query: 350 --SCISWGHAQYGELGYGPYGQKSSAMP----------KKVDILEGMHVISVACGYGHSL 397
             +  +WG  ++G+LG G    +++  P           +        V  +ACG+ H++
Sbjct: 290 EGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTV 349

Query: 398 VIVDRTNV 405
            + +   V
Sbjct: 350 AVTEAGEV 357



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 148/342 (43%), Gaps = 42/342 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            SPT +  L    +  V  G      VA    G+ Y+WG  + G+LGHG+      P  +
Sbjct: 51  TSPTCIAALTDAGVDAVVCGAEYTVAVASS-RGQIYSWGWGDFGRLGHGECGDVFVPRPI 109

Query: 105 SELSKYKIKKAGAGRSHTVVVTE-DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           +  S   + +   G +HT+VVT+ DG    FG N++GQLG G   + + P  V  L  E 
Sbjct: 110 AFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQNGQLGLGHTNDCLSPQLVTALQGER 169

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V++ ACG++ +  L++ E  ++ + G  +YG LG G   +  T              P  
Sbjct: 170 VSSVACGSEHS--LAATEAGTVFSWGWGRYGNLGDGDSQDRYT--------------PTR 213

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L G T+  V CG  H+  V  +G V+T+G+  YG+LGH +  D   P  V   Q   
Sbjct: 214 VVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHCR 273

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW----- 331
           V    + ++ G  ++      G LY WG  K       + +D   P P+           
Sbjct: 274 V----STVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVE 329

Query: 332 -------NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
                   +  +  G  H     ++  + SWG    G+LG+G
Sbjct: 330 AGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHG 371



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 30/296 (10%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVA-AGCVSCHCVAVDV-EGRCYTWGRNER 87
           W   GR      G++  P   RP+     R VA   C   H + V   +G  YT+GRN+ 
Sbjct: 89  WGDFGRLGHGECGDVFVP---RPIAFFSGRPVARVACGDTHTLVVTQGDGALYTFGRNQN 145

Query: 88  GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
           GQLG G       P +V+ L   ++     G  H++  TE G   ++GW ++G LG G  
Sbjct: 146 GQLGLGHTNDCLSPQLVTALQGERVSSVACGSEHSLAATEAGTVFSWGWGRYGNLGDGDS 205

Query: 148 RNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           ++   P+ V  L    VT+  CG   +  ++  +   +   G  +YGQLGHG   ++   
Sbjct: 206 QDRYTPTRVVGLDGVTVTSVVCGWRHSAVVT--DEGRVFTFGWSKYGQLGHGDHVDHT-- 261

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                       RP  +A L    +  VA G  HT+A DS+G +Y WG+  +G+LG  + 
Sbjct: 262 ------------RPCLVAGLQHCRVSTVAGGWRHTMAADSEGNLYAWGWNKFGQLGLGDS 309

Query: 267 KDEWVPRRVDVFQRNNVLPPE--------AVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +D   P  V  F                 A+++ G  ++      G++Y WG+  N
Sbjct: 310 EDRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVN 365



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 103/226 (45%), Gaps = 5/226 (2%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           + +SP  +  L G  +  VA  C S H +A    G  ++WG    G LG GD   R  PT
Sbjct: 155 DCLSPQLVTALQGERVSSVA--CGSEHSLAATEAGTVFSWGWGRYGNLGDGDSQDRYTPT 212

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V  L    +     G  H+ VVT++G    FGW+K+GQLG G   +   P  V  L   
Sbjct: 213 RVVGLDGVTVTSVVCGWRHSAVVTDEGRVFTFGWSKYGQLGHGDHVDHTRPCLVAGLQHC 272

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
             +T  G       +  EG ++   G  ++GQLG G D+E     + V   +        
Sbjct: 273 RVSTVAGGWRHTMAADSEG-NLYAWGWNKFGQLGLG-DSEDRAAPTPVA-GFGLAGGGVE 329

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
             A     +  +ACG  HTVAV   G VY+WG G  G+LGH  ++D
Sbjct: 330 AGAATPRRVALLACGWRHTVAVTEAGEVYSWGRGVNGQLGHGAEQD 375


>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
          Length = 531

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 130/272 (47%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P RL  L G  I  ++ G    H V    EG  YTWG N   QLG+G       P  V
Sbjct: 68  IEPRRLDSLCGKKIACLSYGS-GPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQV 126

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
           S  L   K+ +   G  H++V+T DG    +G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 127 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 186

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +    ACG   +  ++ VE   +   G    GQLG G+                 QP P 
Sbjct: 187 IVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 230

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            IAAL G  + +VACG  HT+ +  +G +Y WG   YG+LG   + ++  P  V V  ++
Sbjct: 231 RIAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTV-VVDKD 289

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            V+   A  SA +  S+     GQ+YMWG+ +
Sbjct: 290 RVIEIAACHSAHT--SAAKTQSGQVYMWGQCR 319



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/290 (26%), Positives = 132/290 (45%), Gaps = 29/290 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  TE+      G N  G LG+G +++ IEP  +  L   ++   + G+   V
Sbjct: 33  GSAGNEVLYATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSLCGKKIACLSYGSGPHV 92

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            L++ EG  +   G   Y QLG+GT N                  P  ++  L  + +++
Sbjct: 93  VLATEEG-EVYTWGHNAYSQLGNGTTNHGFV--------------PCQVSTNLVNKKVIE 137

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++H++ + S G VYTWG+   G++G     ++ +PRRV    +N ++     I+ G
Sbjct: 138 VACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIV---VNIACG 194

Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
            + S      G++Y+WG   N     G     P P  +  L G  ++ +  G  H  V  
Sbjct: 195 QMCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 254

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           D   I +WG   YG+LG G   + + + P  V + +   +   AC   H+
Sbjct: 255 DEGQIYAWGANSYGQLGTG--NKSNQSYPTTVVVDKDRVIEIAACHSAHT 302


>gi|354487926|ref|XP_003506122.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Cricetulus
           griseus]
 gi|344253822|gb|EGW09926.1| RCC1 and BTB domain-containing protein 2 [Cricetulus griseus]
          Length = 551

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 132/272 (48%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H V    +G  +TWG N   QLG+G       P  I
Sbjct: 87  IEPRRLNSLTGKKIASLSYGS-GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHI 145

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
            + LS  ++ +   G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 146 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V    ACG      ++ V+   +   G    GQLG G+                 QP P 
Sbjct: 206 VVMNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 249

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +AAL G  + +VACG  HT+ +  +G VY WG   YG+LG   + ++  P  V V +++
Sbjct: 250 RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV-VVEKD 308

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 309 RIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T D      G N  G LG G I++ IEP  +  
Sbjct: 35  SLCSEEELQSIRQACVFGSAGNEVLYTTVDDEIFVLGTNCSGCLGIGDIQSTIEPRRLNS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ +G  +   G   Y QLG+GT N                
Sbjct: 95  LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSAHT 321



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ ++ VA G    H + +  EG+ Y WG N  GQLG G+K  +  P
Sbjct: 243 GNQPTPCRVAALQGIRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 300

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           T V       I+ A    +HT      G
Sbjct: 301 TPVVVEKDRIIEIAACHSAHTSAAKTQG 328


>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Canis lupus familiaris]
          Length = 529

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 142/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +  + + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQ-STIEPRRLDALSGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG   +  ++ V    +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCS--MAVVNTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  IAAL G  I +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRIAALQGIRIQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPAPV-VVEKDRIVEIAACHSAHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 136/307 (44%), Gaps = 32/307 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDA 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNHGLV------------ 141

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + + +VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 142 --PCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G   + + + P  V + +   V   
Sbjct: 257 IRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTG--NKSNQSYPAPVVVEKDRIVEIA 314

Query: 390 ACGYGHS 396
           AC   H+
Sbjct: 315 ACHSAHT 321


>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
 gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
 gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Nomascus leucogenys]
 gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
           paniscus]
 gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
           [Gorilla gorilla gorilla]
 gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; Short=CHC1-L;
           AltName: Full=RCC1-like G exchanging factor; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
 gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Homo sapiens]
 gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
 gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
 gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Homo sapiens]
 gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [synthetic construct]
 gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
          Length = 551

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 555

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 36/293 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP--LMD 327
              +N V+     I+ G +        G++Y+WG        L N+G+    P P  +  
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQ---PTPCRVAA 253

Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
           L G  ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 254 LQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
           [Gorilla gorilla gorilla]
          Length = 527

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 158 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 176 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 282


>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
           magnipapillata]
          Length = 725

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 103/361 (28%), Positives = 159/361 (44%), Gaps = 32/361 (8%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C   H   V   GR Y +G N+ GQLG G     ++P+ V  L   K++K   GR+
Sbjct: 41  VEMACGDEHSAVVTESGRLYVFGSNDWGQLGLGHTKSLNKPSFVKPLKPEKVRKVACGRN 100

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
           HT+V +E G   +FG N+ GQLG     NE+ P  +  +   E+   ACG   ++ LS  
Sbjct: 101 HTIVYSESGKLFSFGCNEDGQLGHVDKENELLPKEIESIPQMEIKQIACGTYHSIILS-- 158

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           E   +   G    GQLG G + E N+    +K   E               +V V+CG  
Sbjct: 159 EDGDVYVWGNNNEGQLGLGEEVE-NSLPKKLKFKKE---------------VVSVSCGYY 202

Query: 240 HTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
           HT  V   G++YT+G    G+LG    +  +  VP+ V +   N+       +S G+ ++
Sbjct: 203 HTALVTRDGFLYTFGENELGKLGLSSSQLSNTTVPQSVAMPADNDEY---ISVSCGARHT 259

Query: 298 SCTAGGGQLYMWGKLKN----NGDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVGADS- 349
                 G  Y WG        +G   +    PK +  LSG     +  G  H  V  +S 
Sbjct: 260 VAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSCGESHTAVVTESG 319

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
              ++G  ++G+LG G     +S  P  +      +V+ V+CG  H+LV+    N  + +
Sbjct: 320 KVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTLVLAVHKNKDDFV 379

Query: 410 D 410
           D
Sbjct: 380 D 380



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGA 117
            +++  C + H VA+  +G CY WG   +GQLGHG K ++ + P  + +LS  K      
Sbjct: 248 EYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKLLEVNEPKQIKKLSGQKCISVSC 307

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPV-RCLVSEVTATACGADFTV 174
           G SHT VVTE G    FG  +HG+LG G  S  N  +P  + R     V   +CG   T+
Sbjct: 308 GESHTAVVTESGKVFTFGDGRHGKLGQGEDSFSNSFDPVYLSRFNYFNVVYVSCGGCHTL 367

Query: 175 WLS 177
            L+
Sbjct: 368 VLA 370


>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 131/272 (48%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H V    EG  +TWG N   QLG+G       P  I
Sbjct: 63  IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
            + LS  ++ +   G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 122 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 181

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V  T ACG      ++ V+   +   G    GQLG G                  QP P 
Sbjct: 182 VVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGLGNSGN--------------QPTPC 225

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +AAL G  + +VACG  HT+ +  +G VY WG   YG+LG   + ++  P  V V +++
Sbjct: 226 RVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTV-EKD 284

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 285 RIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +R+ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVRSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 176 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 282



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ ++ VA G    H + +  EG+ Y WG N  GQLG G+K  +  P
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 276

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           T V+      I+ A    +HT      G
Sbjct: 277 TPVTVEKDRIIEIAACHSTHTSAAKTQG 304


>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
 gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
          Length = 527

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 158 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 176 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 282


>gi|387541132|gb|AFJ71193.1| RCC1 and BTB domain-containing protein 2 [Macaca mulatta]
          Length = 551

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIASLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V   +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-TMEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 137/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P     +E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVT---MEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSTHT 321


>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
          Length = 556

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 262 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
          Length = 451

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQAWVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 262 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 545

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/353 (26%), Positives = 161/353 (45%), Gaps = 29/353 (8%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D + V   C S H V +  +G+ YTWGR + G+LGHGD   +  P +V +L   K+++  
Sbjct: 33  DRQTVQISCGSGHTVVLTDDGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVT 92

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
            G  HT  VT  G    +G   +G+LG G+      PS V  +    V   ACG+  TV 
Sbjct: 93  CGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHSTPSLVESIKGLYVRQVACGSRHTVV 152

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L  +E   +   G  + G  GHG  + +             Q  P  ++ L    I +++
Sbjct: 153 L--LENQDVYTWGDKENGVSGHGDTSGH-------------QYSPYCVSELVEINIKQIS 197

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
               HT A+   G V+T+G G +GRLGH  ++++ V + +D      +      ++ G  
Sbjct: 198 ACGFHTAALSENGQVFTFGEGKFGRLGHNSERNQPVAKCIDALIGKRIKQ----VACGGF 253

Query: 296 NSSCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
           +++     G ++ WG  ++    +GD  + + P  +  L   N+  +  G  H     D 
Sbjct: 254 HTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVESLIDKNIIQLTCGWSHTVALTDK 313

Query: 350 -SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +WG+  +G+LG+    + +   PK ++      VISVA    H++ +V+
Sbjct: 314 GEVFTWGNGDHGKLGHNDTNKVTE--PKLIETFNSKRVISVASYNEHTVALVN 364



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 157/335 (46%), Gaps = 31/335 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           YTWGR E GQLG GD   +  P +V  L   +  +   G  HTVV+T+DG    +G    
Sbjct: 4   YTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQISCGSGHTVVLTDDGKVYTWGRGDD 63

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G    +  P  V  L   +V    CG+  T  + +V G  +   G   YG+LGHG
Sbjct: 64  GRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAV-TVSG-ELYTWGGGMYGKLGHG 121

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
            +N ++T              P  + ++ G  + +VACG+ HTV +     VYTWG    
Sbjct: 122 NENGHST--------------PSLVESIKGLYVRQVACGSRHTVVLLENQDVYTWGDKEN 167

Query: 259 GRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G  GH +    ++ P  V      N+      ISA   +++  +  GQ++ +G+ K    
Sbjct: 168 GVSGHGDTSGHQYSPYCVSELVEINIKQ----ISACGFHTAALSENGQVFTFGEGKFGRL 223

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
             N+  +    K +  L G  ++ +  G  H     +S    +WG  ++G+LG+G   + 
Sbjct: 224 GHNSERNQPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGD--KV 281

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +  +P +V+ L   ++I + CG+ H++ + D+  V
Sbjct: 282 NQIIPTRVESLIDKNIIQLTCGWSHTVALTDKGEV 316



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 19/208 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G   G+  SP  +  LV ++I+ ++A     H  A+   G+ +T+G  + G+LGH  +  
Sbjct: 173 GDTSGHQYSPYCVSELVEINIKQISA--CGFHTAALSENGQVFTFGEGKFGRLGHNSERN 230

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           +     +  L   +IK+   G  HT  VTE G+   +G  +HGQLG G   N+I P+ V 
Sbjct: 231 QPVAKCIDALIGKRIKQVACGGFHTAAVTESGHVFTWGGGEHGQLGHGDKVNQIIPTRVE 290

Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            L+ + +    CG   TV L+  +   +   G   +G+LGH   N+              
Sbjct: 291 SLIDKNIIQLTCGWSHTVALT--DKGEVFTWGNGDHGKLGHNDTNKVT------------ 336

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV 244
              P+ I     + ++ VA    HTVA+
Sbjct: 337 --EPKLIETFNSKRVISVASYNEHTVAL 362



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 83/163 (50%), Gaps = 13/163 (7%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           VYTWG G  G+LG  +  D++ P  V+  Q    +     IS GS ++      G++Y W
Sbjct: 3   VYTWGRGEDGQLGLGDTSDQYHPILVEALQDRQTVQ----ISCGSGHTVVLTDDGKVYTW 58

Query: 310 -----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
                G+L +  + W + P+ + DL    +R +  G+ H   V       +WG   YG+L
Sbjct: 59  GRGDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGELYTWGGGMYGKL 118

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+G   +   + P  V+ ++G++V  VACG  H++V+++  +V
Sbjct: 119 GHG--NENGHSTPSLVESIKGLYVRQVACGSRHTVVLLENQDV 159



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 3/89 (3%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N + PTR+  L+  D   +   C   H VA+  +G  +TWG  + G+LGH D  +   P 
Sbjct: 282 NQIIPTRVESLI--DKNIIQLTCGWSHTVALTDKGEVFTWGNGDHGKLGHNDTNKVTEPK 339

Query: 103 IVSELSKYKIKKAGAGRSHTV-VVTEDGN 130
           ++   +  ++    +   HTV +V  D N
Sbjct: 340 LIETFNSKRVISVASYNEHTVALVNPDAN 368


>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
           paniscus]
 gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
           [Gorilla gorilla gorilla]
 gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
          Length = 556

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 262 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 1085

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 115/371 (30%), Positives = 174/371 (46%), Gaps = 62/371 (16%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V+PT+   L GV    VA      H +A+  +G  + WG N++GQLG    ++R  P  V
Sbjct: 628 VTPTQAPALSGV----VALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAV 683

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
             L+   +    AG +H++V+  DG S ++G N +GQLG G+  + + P PV+    S +
Sbjct: 684 PGLAH--VVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT--STLHPVPVQVPGPSAM 739

Query: 164 TATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
              A G        +D TVW     G+          G+LG GT  +             
Sbjct: 740 KGVAAGGSHSLAVRSDGTVWAWGNNGS----------GELGDGTGLQ------------- 776

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            +PRP  +  L   + V V+ GTNH++AV S G V+ WG    G+LG       +VP RV
Sbjct: 777 -RPRPVQVQGLG--SAVAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRV 833

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLS 329
                N V+     +SAGS +S      G ++ W     G+L +      + P  +  L+
Sbjct: 834 SGL--NGVM----AVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGLT 887

Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
           G  +  + +G  H   V +D +  +WG+  YG+LG G   Q+S   P +V  L GM  +S
Sbjct: 888 G--VVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP--PVQVPGLAGM--VS 941

Query: 389 VACGYGHSLVI 399
           VA G  HSL +
Sbjct: 942 VAAGTYHSLAV 952



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 141/314 (44%), Gaps = 41/314 (13%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
            VA    + H +AV  +G  + WG N +GQLG G  I R  P  VS L+   +    AG +
Sbjct: 790  VAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGTGITRYVPVRVSGLNG--VMAVSAGSA 847

Query: 121  HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
            H++ +  DG   A+G+N +GQLG  +    + P  V  L + V + A G   +  L+   
Sbjct: 848  HSLALRSDGTVWAWGYNFYGQLGDATSTQRLVPIQVPGL-TGVVSIAAGTHHS--LAVRS 904

Query: 181  GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              ++   G   YGQLG GT  + +               P  +  LAG  +V VA GT H
Sbjct: 905  DGTVWAWGYNFYGQLGDGTKIQRSP--------------PVQVPGLAG--MVSVAAGTYH 948

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            ++AV S G V+ WG+  +G+LG        +P  V +   + V+   A   +  V +  T
Sbjct: 949  SLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLP--VPISSSSGVIAAAANWHSLVVRTDGT 1006

Query: 301  AGGGQLYMWGKLKNN----GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
                   +WG   NN    GD    D   P P    +G  +R + SG  H   + +D + 
Sbjct: 1007 -------VWGWGSNNASQLGDGSTSDRKMPTPSSVPNG--VRSISSGANHSLALRSDGTV 1057

Query: 352  ISWGHAQYGELGYG 365
             +WG    G+LG G
Sbjct: 1058 WAWGFGNSGQLGDG 1071



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 99/347 (28%), Positives = 155/347 (44%), Gaps = 44/347 (12%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VAAG    H + +  +G  + WG N  GQLG G  I +  P  V  L    +     G  
Sbjct: 42  VAAGA--AHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLD--SVVALAVGYQ 97

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           H++ +  DG   A+G N  GQLG GS      P  V  L + V A A G   +  L+ + 
Sbjct: 98  HSLALRSDGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSL-NGVVAIAAGDHHS--LALLS 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
             S+   G   +GQLG          D++V     A P P  +  L+G  +V ++ G+ H
Sbjct: 155 DGSVWAWGYNAHGQLG---------DDTTV-----ASPLPVQVQGLSG--VVALSAGSTH 198

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           ++AV S G V  WG   YG+LG     + W P  V      + L     + AG+ +S   
Sbjct: 199 SLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLV------SSLTGVKSVVAGTFHSLAL 252

Query: 301 AGGGQLYMWGKLKNNGDDWM-------YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
              G +  WG+   NG   +        P P++     N++ + +G+ H   + +D +  
Sbjct: 253 CSDGTVRAWGE---NGSGQLGISSTTRRPVPVVVPGLTNVQALAAGSAHSLALRSDGTVR 309

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +WG+  +G++G G   Q+ +  P +V  +  M   S+A G  HSL +
Sbjct: 310 AWGNNDHGQVGNGTISQQLT--PVQVPGVGRMK--SIAAGGAHSLAM 352



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 107/248 (43%), Gaps = 43/248 (17%)

Query: 42   GNLVSPTRLRP-----LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            G+  S  RL P     L GV    +AAG  + H +AV  +G  + WG N  GQLG G KI
Sbjct: 870  GDATSTQRLVPIQVPGLTGV--VSIAAG--THHSLAVRSDGTVWAWGYNFYGQLGDGTKI 925

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            QR  P  V  L+   +    AG  H++ V  +G   A+G+N HGQLG G+    + P P+
Sbjct: 926  QRSPPVQVPGLAG--MVSVAAGTYHSLAVHSNGTVWAWGYNNHGQLGDGTTTQRLLPVPI 983

Query: 157  RCLVSEVTATA------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
                  + A A         D TVW                    G G++N     D S 
Sbjct: 984  SSSSGVIAAAANWHSLVVRTDGTVW--------------------GWGSNNASQLGDGST 1023

Query: 211  KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
              +    P P ++       +  ++ G NH++A+ S G V+ WGFG  G+LG        
Sbjct: 1024 --SDRKMPTPSSVP----NGVRSISSGANHSLALRSDGTVWAWGFGNSGQLGDGVMSMRL 1077

Query: 271  VPRRVDVF 278
            VP  V  F
Sbjct: 1078 VPAGVSGF 1085



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 151/358 (42%), Gaps = 40/358 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L GVD        +  H +AV  +G  + WG N  G+LG G  + R  P  V  
Sbjct: 480 PVQVPGLAGVDT----VSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSRLTPVQVPG 535

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           LS   +    AG +H++ +  DG   A+G N +G LG G+    + P  V  L S V A 
Sbjct: 536 LS--SMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRLSPVQVPGL-SGVVAL 592

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G  ++  L+     S+   G    GQLG GT     T              P    AL
Sbjct: 593 AAGNGYS--LAVDAQGSVWAWGYNGMGQLGDGTTTPRVT--------------PTQAPAL 636

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
           +G  +V +A G +H++A+ + G  + WG    G+LG     +   P  V           
Sbjct: 637 SG--VVALAAGDSHSLALRADGVAWAWGGNDQGQLGDATTLERSTPAAVPGLAH------ 688

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
              ++AG+ +S      G    WG        +G   ++P P+       ++ + +G  H
Sbjct: 689 VVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVPGPSAMKGVAAGGSH 748

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              V +D +  +WG+   GELG G   Q+    P+ V +      ++V+ G  HSL +
Sbjct: 749 SLAVRSDGTVWAWGNNGSGELGDGTGLQR----PRPVQVQGLGSAVAVSAGTNHSLAV 802



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 162/367 (44%), Gaps = 43/367 (11%)

Query: 41  DGNLVSPTRLRPL-VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           DG  +S  RL P+ V      VA    S H +A+  +G  + WG N  G LG G  ++R 
Sbjct: 521 DGTTLS--RLTPVQVPGLSSMVAVAAGSTHSLALRADGTVWAWGDNSNGALGDGTTLRRL 578

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            P  V  LS   +    AG  +++ V   G+  A+G+N  GQLG G+    + P+    L
Sbjct: 579 SPVQVPGLS--GVVALAAGNGYSLAVDAQGSVWAWGYNGMGQLGDGTTTPRVTPTQAPAL 636

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S V A A G   ++ L + +G +    G  Q GQLG  T  E +T              
Sbjct: 637 -SGVVALAAGDSHSLALRA-DGVAWAWGGNDQ-GQLGDATTLERST-------------- 679

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P A+  LA   +V +A G  H++ + + G   +WG   YG+LG        VP +V    
Sbjct: 680 PAAVPGLA--HVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGTSTLHPVPVQVP--- 734

Query: 280 RNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNL 333
                 P A+  ++AG  +S      G ++ WG   +    +G     P+P+      + 
Sbjct: 735 -----GPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRPRPVQVQGLGSA 789

Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             + +G  H   V +D +  +WG    G+LG G     +  +P +V  L G  V++V+ G
Sbjct: 790 VAVSAGTNHSLAVQSDGTVWAWGGNSQGQLGDGT--GITRYVPVRVSGLNG--VMAVSAG 845

Query: 393 YGHSLVI 399
             HSL +
Sbjct: 846 SAHSLAL 852



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 160/360 (44%), Gaps = 44/360 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L GV    VA    S H +AV  +G+   WG N  GQLG G   +R  P +VS 
Sbjct: 180 PVQVQGLSGV----VALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSS 235

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L+   +K   AG  H++ +  DG   A+G N  GQLG  S      P  V  L + V A 
Sbjct: 236 LT--GVKSVVAGTFHSLALCSDGTVRAWGENGSGQLGISSTTRRPVPVVVPGL-TNVQAL 292

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  ++ L S    ++   G   +GQ+G+GT ++              Q  P  +  +
Sbjct: 293 AAGSAHSLALRS--DGTVRAWGNNDHGQVGNGTISQ--------------QLTPVQVPGV 336

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               +  +A G  H++A+ + G  + WG    G+LG  +   +  P RV + QR   +P 
Sbjct: 337 G--RMKSIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARV-LGQRIR-MP- 391

Query: 287 EAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPKPL----MDLSGWNLRCMDSGN 340
              +  G+ +S      G ++ WG       GD    P+ L      L+G  +  + +  
Sbjct: 392 ---LGTGNRHSLALHADGTVWAWGVNTAGQLGDGTDLPRTLPVQVPGLAG--VHTLSATT 446

Query: 341 MHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            H     AD +  +WG   +G+LG G   Q+   +P +V  L G+  +S    + HSL +
Sbjct: 447 SHSLAARADGTVWAWGDNAFGQLGDGTTTQR--LLPVQVPGLAGVDTVSSM--HQHSLAV 502



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 148/357 (41%), Gaps = 42/357 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L GV    VA      H +A+  +G  + WG N  GQLG    +    P  V  
Sbjct: 130 PIQVWSLNGV----VAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQG 185

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           LS   +    AG +H++ V  DG   A+G N +GQLG GS      P  V  L + V + 
Sbjct: 186 LS--GVVALSAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSL-TGVKSV 242

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
             G   ++ L S    ++   G    GQLG  +                 +P P  +  L
Sbjct: 243 VAGTFHSLALCS--DGTVRAWGENGSGQLGISSTTR--------------RPVPVVVPGL 286

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               +  +A G+ H++A+ S G V  WG   +G++G+     +  P +V    R      
Sbjct: 287 --TNVQALAAGSAHSLALRSDGTVRAWGNNDHGQVGNGTISQQLTPVQVPGVGRMK---- 340

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRC-MDSGNM 341
              I+AG  +S      G  + WG        +G      +P   L G  +R  + +GN 
Sbjct: 341 --SIAAGGAHSLAMRADGITWAWGDDSQGQLGDGQSSQQLRPARVL-GQRIRMPLGTGNR 397

Query: 342 HHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           H   + AD +  +WG    G+LG G    ++  +P +V  L G+H +S      HSL
Sbjct: 398 HSLALHADGTVWAWGVNTAGQLGDGTDLPRT--LPVQVPGLAGVHTLSATT--SHSL 450



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/292 (26%), Positives = 132/292 (45%), Gaps = 34/292 (11%)

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF 172
           ++  AG +H++++  DG   A+G N +GQLG G+   +  P  V+ L S V A A G   
Sbjct: 40  EQVAAGAAHSLMLRSDGTVWAWGDNTYGQLGDGTGITQRLPVRVQSLDS-VVALAVGYQH 98

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           ++ L S    ++   G   +GQLG G+D +                 P  + +L G  +V
Sbjct: 99  SLALRS--DGTVWAWGDNFFGQLGDGSDAQSQV--------------PIQVWSLNG--VV 140

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            +A G +H++A+ S G V+ WG+  +G+LG        +P +V        L     +SA
Sbjct: 141 AIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTTVASPLPVQV------QGLSGVVALSA 194

Query: 293 GSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
           GS +S      G++  WG        +G       P++  S   ++ + +G  H   + +
Sbjct: 195 GSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTERWTPVLVSSLTGVKSVVAGTFHSLALCS 254

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           D +  +WG    G+LG       ++  P  V +    +V ++A G  HSL +
Sbjct: 255 DGTVRAWGENGSGQLGI----SSTTRRPVPVVVPGLTNVQALAAGSAHSLAL 302


>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Nomascus leucogenys]
          Length = 556

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 71  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 126

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 127 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 186

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 187 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 244

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 245 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 290

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 291 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 343



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 40  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 99

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 100 LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 144

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 145 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 204

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 205 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 261

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 262 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 311


>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
           scrofa]
          Length = 568

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 83  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHVVLATTEGEVF 138

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 139 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 198

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++ V   ACG      ++ V+   +   G    GQLG 
Sbjct: 199 GQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 256

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  IAAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 257 GSGGN--------------QPTPCRIAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 302

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V + +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 303 YGQLGTGNKSNQSYPTPV-IVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 355



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 130/291 (44%), Gaps = 31/291 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  T +      G N  G LG G +++ IEP  +  L   ++   + G+   V
Sbjct: 69  GSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIACLSYGSGPHV 128

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            L++ EG  +   G   Y QLG+GT N                  P  I+  L+ + +++
Sbjct: 129 VLATTEG-EVFTWGHNAYSQLGNGTTNH--------------GLVPCHISTNLSNKQVIE 173

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV    +N  +     I+ G
Sbjct: 174 VACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNKTV---VNIACG 230

Query: 294 SVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            + S      G++Y+WG   N      +G +   P  +  L G  ++ +  G  H  V  
Sbjct: 231 QMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRIAALQGIRVQRVACGYAHTLVLT 290

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
           D   + +WG   YG+LG G    +S   P    I+E   +I + AC   H+
Sbjct: 291 DEGQVYAWGANSYGQLGTGNKSNQSYPTPV---IVEKDRIIEIAACHSAHT 338


>gi|118084855|ref|XP_417055.2| PREDICTED: RCC1 and BTB domain-containing protein 2 [Gallus gallus]
          Length = 566

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 130/272 (47%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P RL  L G  I  ++ G    H V    EG  YTWG N   QLG+G       P  V
Sbjct: 103 IEPKRLDSLCGKKIACLSYGS-GPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGLVPCQV 161

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
           S  L   K+ +   G  H++V+T DG    +G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 162 STNLVNKKVIEVACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 221

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V    ACG   +  ++ VE   +   G    GQLG G+                 QP P 
Sbjct: 222 VVVNIACGQMCS--MAVVENGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 265

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            IAAL G  + +VACG  HT+ +  +G +Y WG   YG+LG   + ++  P  V V  ++
Sbjct: 266 RIAALQGIRVQRVACGCAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVTV-DKD 324

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            V+   A  SA +  S+     GQ+YMWG+ +
Sbjct: 325 RVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 354



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 80/289 (27%), Positives = 131/289 (45%), Gaps = 27/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VTE+      G N  G LG+G I++ IEP  +  L   ++   + G+   V
Sbjct: 68  GSAGNEVLYVTENDEVFVLGMNCSGCLGTGDIQSTIEPKRLDSLCGKKIACLSYGSGPHV 127

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L++ EG  +   G   Y QLG+GT N                   +    L  + +++V
Sbjct: 128 VLATEEG-EVYTWGHNAYSQLGNGTTN-------------HGLVPCQVSTNLVNKKVIEV 173

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++ + S G VYTWG+   G++G     ++ +PRRV    +N V+     I+ G 
Sbjct: 174 ACGSHHSMVLTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKVV---VNIACGQ 230

Query: 295 VNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD 348
           + S      G++Y+WG   N     G     P P  +  L G  ++ +  G  H  V  D
Sbjct: 231 MCSMAVVENGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVACGCAHTLVLTD 290

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
              I +WG   YG+LG G   + + + P  V + +   V   AC   H+
Sbjct: 291 EGQIYAWGANSYGQLGTG--NKSNQSYPTTVTVDKDRVVEIAACHSAHT 337


>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
           troglodytes]
          Length = 552

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 69  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLNGKKIACLSYGS-GPHIVLATTEGEVF 124

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 125 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 184

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 185 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 242

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 243 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 288

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 289 YGQLGTGNKSNQSYPTPVTV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 341



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 38  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 97

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 98  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 142

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 143 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 202

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 203 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 259

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 260 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 309


>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
 gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
           Full=Chromosome condensation 1-like; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 2
 gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Mus musculus]
 gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
 gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_a [Mus musculus]
 gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
 gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
          Length = 551

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    +G  +
Sbjct: 66  EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G +Y WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ +G  +   G   Y QLG+GT N                
Sbjct: 95  LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   I +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSAHT 321


>gi|428173156|gb|EKX42060.1| hypothetical protein GUITHDRAFT_95823 [Guillardia theta CCMP2712]
          Length = 546

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 131/291 (45%), Gaps = 23/291 (7%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           + F A    + HC AV   G  YTWG+   GQLGHGD + +  P  V  + K ++K   A
Sbjct: 273 VVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRI-KGEVKSVSA 331

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTV 174
           G  HTV VT  G    +G  K G+LG       + P+ V   +     V A   G   T+
Sbjct: 332 GFYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTL 391

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+      + + G    G+LGHG DN+              Q  P  ++AL  E  V +
Sbjct: 392 VLN--RRGQVFSFGSGDSGRLGHGNDND--------------QWSPTFLSALESERCVSI 435

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A G  H+VA+  +G +YTWG G  GRLGH    DE +PR++ +   + +      ++AG 
Sbjct: 436 AAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKLALISHDTI--KAIAVAAGE 493

Query: 295 VNSSCTAGGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
            ++      G L   G++ +    +    + ++D     +    S + HHF
Sbjct: 494 AHTCIFRSEGSLITLGRVSHGRMAEGSCAQDMLDTLHTAISRQSSNDWHHF 544



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 134/306 (43%), Gaps = 42/306 (13%)

Query: 94  DKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
           + I++ R T   +S L +        G  H   VT+ G    +G  ++GQLG G   ++I
Sbjct: 255 NSIKKHRVTRAGLSLLRRVVFSALSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKI 314

Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P PV  +  EV + + G   TV ++     ++   G  + G+LGH         D++ +
Sbjct: 315 IPQPVPRIKGEVKSVSAGFYHTVAVT--HHGALFTWGDGKEGKLGH--------NDNAQR 364

Query: 212 LAYEAQPRPRAIAALA--GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           L       P  +AA    G  +     G +HT+ ++ +G V+++G G  GRLGH    D+
Sbjct: 365 LI------PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQ 418

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPK 323
           W P  +   +    +     I+AG  +S      GQ+Y W     G+L +  D D + P+
Sbjct: 419 WSPTFLSALESERCVS----IAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPR 474

Query: 324 PLMDLSGWNLRCM--DSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
            L  +S   ++ +   +G  H     ++ S I+ G   +G +  G   Q         D+
Sbjct: 475 KLALISHDTIKAIAVAAGEAHTCIFRSEGSLITLGRVSHGRMAEGSCAQ---------DM 525

Query: 381 LEGMHV 386
           L+ +H 
Sbjct: 526 LDTLHT 531



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/181 (27%), Positives = 77/181 (42%), Gaps = 16/181 (8%)

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           ++ G  H  AV   G VYTWG G YG+LGH +  D+ +P+ V   +          +SAG
Sbjct: 278 LSFGAGHCAAVTDTGLVYTWGQGRYGQLGHGDDVDKIIPQPVPRIKGE-----VKSVSAG 332

Query: 294 SVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL--RCMDSGNMHHFV 345
             ++      G L+ WG  K      N+    + P  +     W +      +G  H  V
Sbjct: 333 FYHTVAVTHHGALFTWGDGKEGKLGHNDNAQRLIPTLVAAFIEWGMPVAAAQAGGSHTLV 392

Query: 346 -GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
                   S+G    G LG+G    + S  P  +  LE    +S+A G+ HS+ + D+  
Sbjct: 393 LNRRGQVFSFGSGDSGRLGHGNDNDQWS--PTFLSALESERCVSIAAGFAHSVALTDQGQ 450

Query: 405 V 405
           +
Sbjct: 451 I 451



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 7/157 (4%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT +   +   +   AA     H + ++  G+ +++G  + G+LGHG+   +  PT +S 
Sbjct: 367 PTLVAAFIEWGMPVAAAQAGGSHTLVLNRRGQVFSFGSGDSGRLGHGNDNDQWSPTFLSA 426

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-- 164
           L   +     AG +H+V +T+ G    +G  K G+LG GS  +E+ P  +  L+S  T  
Sbjct: 427 LESERCVSIAAGFAHSVALTDQGQIYTWGCGKLGRLGHGSDSDEVLPRKL-ALISHDTIK 485

Query: 165 --ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             A A G   T    S EG S++  G   +G++  G+
Sbjct: 486 AIAVAAGEAHTCIFRS-EG-SLITLGRVSHGRMAEGS 520


>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
          Length = 527

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 132/272 (48%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H V    +G  +TWG N   QLG+G       P  I
Sbjct: 63  IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSE 162
            + LS  ++ +   G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 122 STNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 181

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V    ACG      ++ V+   +   G    GQLG G+                 QP P 
Sbjct: 182 VVMNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGLGSSGN--------------QPTPC 225

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +AAL G  + +VACG  HT+ +  +G +Y WG   YG+LG   + ++  P  V V +++
Sbjct: 226 RVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV-VVEKD 284

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 285 RIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ +G  +   G   Y QLG+GT N                
Sbjct: 71  LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 176 GCLQNKVVMN---IACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   I +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 289

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 290 AACHSAHT 297



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 2/88 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ ++ VA G    H + +  EG+ Y WG N  GQLG G+K  +  P
Sbjct: 219 GNQPTPCRVAALQGIRVQRVACG--YAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP 276

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           T V       I+ A    +HT      G
Sbjct: 277 TPVVVEKDRIIEIAACHSAHTSAAKTQG 304


>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
           [Oreochromis niloticus]
          Length = 536

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 138/298 (46%), Gaps = 30/298 (10%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G L    + P R+  L G  I  ++ G    H V    +G  Y
Sbjct: 51  EVFALGTNCSGCLGL--GDLQST-IEPRRIDVLCGKKIVSLSYG-TGPHVVIATADGEVY 106

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G       P +VS  L   ++ +   G  HT+ +T DG   A+G+N  
Sbjct: 107 AWGHNGYSQLGNGTTNHGLTPALVSTNLLSKRVTEVACGSHHTIALTTDGEVYAWGYNNS 166

Query: 140 GQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQ+GSGS  N+  P+P R   CL ++V    ACG      ++ ++   I   G    GQL
Sbjct: 167 GQVGSGSTANQ--PTPRRVSSCLQNKVVVNIACGQ--LCSMAVLDNGEIYGWGYNCNGQL 222

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G +                Q  P  IAAL G  IV+VACG  HT+A+  +G+VY WG 
Sbjct: 223 GLGNNGN--------------QQTPCRIAALQGVNIVQVACGYAHTLALTDEGFVYAWGA 268

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
             YG+LG   + ++ +P  ++  +   V   E      S  S+     GQ+ MWG+ +
Sbjct: 269 NSYGQLGTGNKSNQALPTPINTDKERIV---EVAACHTSHTSAAKTQSGQVLMWGQCR 323



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 132/291 (45%), Gaps = 31/291 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VT +    A G N  G LG G +++ IEP  +  L   ++ + + G    V
Sbjct: 37  GSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHV 96

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ +G  +   G   Y QLG+GT N   T              P  ++  L  + + +
Sbjct: 97  VIATADG-EVYAWGHNGYSQLGNGTTNHGLT--------------PALVSTNLLSKRVTE 141

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++HT+A+ + G VY WG+   G++G     ++  PRRV    +N V+     I+ G
Sbjct: 142 VACGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV---VNIACG 198

Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
            + S      G++Y WG        L NNG+    P  +  L G N+  +  G  H    
Sbjct: 199 QLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQT-PCRIAALQGVNIVQVACGYAHTLAL 257

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            D   + +WG   YG+LG G   + + A+P  ++  +   V   AC   H+
Sbjct: 258 TDEGFVYAWGANSYGQLGTG--NKSNQALPTPINTDKERIVEVAACHTSHT 306


>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
           porcellus]
          Length = 551

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +   L  P RL  L    I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCSGCLGL--GDVQSTL-EPRRLDSLSDKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           +WG N  GQLG+G       P+ I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 SWGHNAYGQLGNGTINHGLVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ +EP  +  
Sbjct: 35  SLCSEEELQVIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGLGDVQSTLEPRRLDS 94

Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L  + +   + G+   + L++ EG  + + G   YGQLG+GT N                
Sbjct: 95  LSDKKIACLSYGSGPHIVLATTEG-EVFSWGHNAYGQLGNGTINH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + + +VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPSHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQAIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSTHT 321


>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
 gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Mus musculus]
          Length = 560

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    +G  +
Sbjct: 75  EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 130

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 131 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 190

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V+   +   G    GQLG 
Sbjct: 191 GQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 248

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G +Y WG   
Sbjct: 249 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 294

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 295 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 347



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 44  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 103

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ +G  +   G   Y QLG+GT N                
Sbjct: 104 LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 148

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 149 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 208

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 209 GCLQNKVV---MNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 265

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   I +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 266 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 322

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 323 AACHSAHT 330


>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
          Length = 369

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +  + + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQ-STIEPRRLDSLSGKKIASLSYG-SGPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V   +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-TMEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIASLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  ++
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTME 306


>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
           [Ornithorhynchus anatinus]
          Length = 721

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 132/274 (48%), Gaps = 23/274 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N + P R+  L G  I  ++ G    H V    EG  YTWG N   QLG+G       P 
Sbjct: 255 NTIEPRRIDSLCGKKITCLSYGS-GPHVVVATAEGEVYTWGHNAYSQLGNGTTNHGLIPC 313

Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
            VS  L   K+ +   G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL 
Sbjct: 314 HVSTNLVNKKVVEVACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQ 373

Query: 161 SEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           +++ T  ACG   +  ++ VE   +   G    GQLG G+                 QP 
Sbjct: 374 NKIATNIACGQMCS--MAVVESGEVYVWGYNGNGQLGLGSSGN--------------QPT 417

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  + +V CG  HT+ +  +G +Y WG   YG+LG   + ++  P  V V +
Sbjct: 418 PCRIAALQGIRVQRVTCGYAHTLVLTDEGQLYAWGANSYGQLGTGNKSNQSYPIPVPV-E 476

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           ++ ++   A  SA +  S+     G +YMWG+ +
Sbjct: 477 KDRIIEIAACHSAHT--SAAKTQSGHVYMWGQCR 508



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 131/291 (45%), Gaps = 31/291 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  TE+      G N  G LG+G ++N IEP  +  L   ++T  + G+   V
Sbjct: 222 GSAGNEVLYATENDEVFVLGTNCSGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGPHV 281

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ EG  +   G   Y QLG+GT N                  P  ++  L  + +V+
Sbjct: 282 VVATAEG-EVYTWGHNAYSQLGNGTTNHGLI--------------PCHVSTNLVNKKVVE 326

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++H++ + S G VY WG+   G++G     ++ +PRRV    +N +      I+ G
Sbjct: 327 VACGSHHSLVLTSDGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKI---ATNIACG 383

Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
            + S      G++Y+WG   N     G     P P  +  L G  ++ +  G  H  V  
Sbjct: 384 QMCSMAVVESGEVYVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQRVTCGYAHTLVLT 443

Query: 348 DS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
           D     +WG   YG+LG G    +S  +P  V   E   +I + AC   H+
Sbjct: 444 DEGQLYAWGANSYGQLGTGNKSNQSYPIPVPV---EKDRIIEIAACHSAHT 491


>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
          Length = 423

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 150/366 (40%), Gaps = 74/366 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS- 105
           P +L  L+G +I  VA  C S H +A+   G  Y+WG    GQLGHGD    + P  ++ 
Sbjct: 44  PKQLGGLLGEEI--VAVSCGSRHTMALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAF 101

Query: 106 -ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS----PVRCLV 160
            E    K+     G  H+  VT DG    +G    GQLG   +  E E +    PV+C +
Sbjct: 102 FEQEGLKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLG---LPKEFEAAHESFPVKCPL 158

Query: 161 SE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            E      V   +CG   T  L+++    +   G    GQLG G+    +T D+ +    
Sbjct: 159 LEGVADESVVKVSCGGTHTAALTNLGRVYVWGRG--DSGQLGIGSAWLKDTDDNGLL--- 213

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
               RP  +    GE +V+VACG  H+ AV  +G+VY WG   YG LG  +  D+  P+R
Sbjct: 214 -GVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKR 272

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
           V+ F       P   +S G  ++   A  G  Y +G+                       
Sbjct: 273 VEFFDDI----PALRVSCGGWHTMVVAKSGDCYAFGR----------------------- 305

Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
                                  +YG LG G    KS   P  V  L+G  VI  ACG  
Sbjct: 306 ----------------------GEYGRLGLGD--TKSRTRPHLVKALKGQTVIQAACGGS 341

Query: 395 HSLVIV 400
           H+L + 
Sbjct: 342 HTLFVT 347



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 27/244 (11%)

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           +++  G    GQLG G           V     A   P+ +  L GE IV V+CG+ HT+
Sbjct: 11  AVVAFGCNDDGQLGTGAKRRPTLAIDDV----SASNFPKQLGGLLGEEIVAVSCGSRHTM 66

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+ + G VY+WG+G  G+LGH + K   VP+++  F++  +      +S G  +S+    
Sbjct: 67  ALTASGAVYSWGWGSMGQLGHGDLKSINVPQKIAFFEQEGL--KVDYVSCGGCHSAAVTN 124

Query: 303 GGQLYMWGK-----------LKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGAD-S 349
            G LYMWG+            +   + +    PL++ ++  ++  +  G  H     +  
Sbjct: 125 DGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADESVVKVSCGGTHTAALTNLG 184

Query: 350 SCISWGHAQYGELGYGPYGQKSS--------AMPKKVDILEGMHVISVACGYGHSLVIVD 401
               WG    G+LG G    K +        + P  V+   G  V+ VACG  HS  + +
Sbjct: 185 RVYVWGRGDSGQLGIGSAWLKDTDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTE 244

Query: 402 RTNV 405
           + +V
Sbjct: 245 QGHV 248



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 18/187 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C + H  AV  +G  Y WG+ + G LG G    +  P  V         +   G
Sbjct: 228 KVVQVACGAFHSAAVTEQGHVYIWGKEDYGMLGVGQTSDQQTPKRVEFFDDIPALRVSCG 287

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
             HT+VV + G+  AFG  ++G+LG G  ++   P  V+ L  + V   ACG   T++++
Sbjct: 288 GWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAACGGSHTLFVT 347

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           S   A +  AG P +G+LG       + K  SV    +  P P          + +V+ G
Sbjct: 348 SDGIAYV--AGRPDHGRLGM-----TDMKPLSVPTRLDLGPIP----------VRQVSAG 390

Query: 238 TNHTVAV 244
             H++A+
Sbjct: 391 GAHSMAL 397



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           DI  +   C   H + V   G CY +GR E G+LG GD   R RP +V  L    + +A 
Sbjct: 278 DIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQTVIQAA 337

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLG-------SGSIRNEIEPSPVR 157
            G SHT+ VT DG +   G   HG+LG       S   R ++ P PVR
Sbjct: 338 CGGSHTLFVTSDGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVR 385


>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
           africana]
          Length = 551

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  +S  LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++ V   ACG   +  ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKAVVNIACGQMCS--MAVVDAGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIHVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  + V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPISV-EKDRIIEIAACHSTHT--SAAKTQGGNVYMWGQCR 338



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 133/309 (43%), Gaps = 70/309 (22%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSASNEVLYTTVNNEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCYISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
              +N  +     I+ G + S      G++Y+W                    G+N    
Sbjct: 200 GCLQNKAV---VNIACGQMCSMAVVDAGEVYVW--------------------GYN---- 232

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             GN                   G+LG G  G + +  P +V  L+G+HV  VACGY H+
Sbjct: 233 --GN-------------------GQLGLGSSGNQPT--PCRVAALQGIHVQRVACGYAHT 269

Query: 397 LVIVDRTNV 405
           LV+ D   V
Sbjct: 270 LVLTDEGQV 278


>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
          Length = 1048

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 121/246 (49%), Gaps = 24/246 (9%)

Query: 37  KGALDGNLVSPT----RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           KG L  N V  T    R+   +G  +  V   C   H +A+  +G  Y+WG N  GQLG 
Sbjct: 113 KGQLGLNSVDCTERTPRMVKALGTSV-IVQIACGIEHSIALTNDGELYSWGSNREGQLGI 171

Query: 93  GD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
           G   +   +P  +  L+   I     G  HTVV+++ G   A+G N  GQLG    +  I
Sbjct: 172 GSHTVTEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFGQLGLNDTQQRI 231

Query: 152 EPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
            P  +R L  ++V   ACG +F+V+L+   G     AG+  YGQLGHG  N  N      
Sbjct: 232 VPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGM--YGQLGHG--NGMN------ 281

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDE 269
                 +  PR +  L G T+ +++CG  HT+A V S+G VY WG GG G+LG+R  +  
Sbjct: 282 ------EILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSA 335

Query: 270 WVPRRV 275
             P  V
Sbjct: 336 TTPLVV 341



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 159/352 (45%), Gaps = 35/352 (9%)

Query: 23  LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           +FC GST    +G   G  D N+  P ++      ++  +A G    + V +  +G+ Y+
Sbjct: 1   MFCWGSTIHGELGL-GGIEDENIFMPRQVDFAKANEVEQIACG--ENYTVTITNDGQVYS 57

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
            G N+ GQLGH     R R  ++  L  +  KK   G  HT+ V E G   ++G N  GQ
Sbjct: 58  CGNNDYGQLGHEKA--RKRLQLIPGLDAFVFKKIACGSCHTLAVNEWGQLFSWGCNMKGQ 115

Query: 142 LGSGSIR-NEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG  S+   E  P  V+ L  S +   ACG + ++ L++     + + G  + GQLG G+
Sbjct: 116 LGLNSVDCTERTPRMVKALGTSVIVQIACGIEHSIALTN--DGELYSWGSNREGQLGIGS 173

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                            + +P+ I  LA   I  +ACG  HTV +   G V+ WG   +G
Sbjct: 174 HTV-------------TEIKPKRIITLAAVPIAFIACGGYHTVVISKSGVVFAWGRNTFG 220

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC-----TAGGGQLYMWGKLKN 314
           +LG  + +   VP ++    RN  +   A     SV  +      T G G   M+G+L +
Sbjct: 221 QLGLNDTQQRIVPCQLRTL-RNAKVCYAACGEEFSVFLTLDGGVFTCGAG---MYGQLGH 276

Query: 315 -NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
            NG + + P+ +M+L G  +  +  G  H    V +     +WG    G+LG
Sbjct: 277 GNGMNEILPRQVMELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLG 328



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 143/332 (43%), Gaps = 34/332 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + WG    G+LG G     +   P  V      ++++   G ++TV +T DG   + G N
Sbjct: 2   FCWGSTIHGELGLGGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNN 61

Query: 138 KHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG    R  ++  P +   V      ACG+  T  L+  E   + + G    GQLG
Sbjct: 62  DYGQLGHEKARKRLQLIPGLDAFV--FKKIACGSCHT--LAVNEWGQLFSWGCNMKGQLG 117

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
                  N+ D +       +  PR + AL    IV++ACG  H++A+ + G +Y+WG  
Sbjct: 118 ------LNSVDCT-------ERTPRMVKALGTSVIVQIACGIEHSIALTNDGELYSWGSN 164

Query: 257 GYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
             G+LG       E  P+R+          P A I+ G  ++   +  G ++ WG+    
Sbjct: 165 REGQLGIGSHTVTEIKPKRIITL----AAVPIAFIACGGYHTVVISKSGVVFAWGRNTFG 220

Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYG 368
               N+    + P  L  L    +     G     F+  D    + G   YG+LG+G   
Sbjct: 221 QLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHG--N 278

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 279 GMNEILPRQVMELMGSTVTQISCGKRHTLALV 310



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 61/191 (31%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD--EWVP-RRVD 276
           PR +       + ++ACG N+TV + + G VY+ G   YG+LGH + +   + +P     
Sbjct: 25  PRQVDFAKANEVEQIACGENYTVTITNDGQVYSCGNNDYGQLGHEKARKRLQLIPGLDAF 84

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
           VF++         I+ GS ++      GQL+                             
Sbjct: 85  VFKK---------IACGSCHTLAVNEWGQLF----------------------------- 106

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
                           SWG    G+LG       +   P+ V  L    ++ +ACG  HS
Sbjct: 107 ----------------SWGCNMKGQLGLNSV-DCTERTPRMVKALGTSVIVQIACGIEHS 149

Query: 397 LVIVDRTNVGE 407
           + +   TN GE
Sbjct: 150 IAL---TNDGE 157


>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
          Length = 527

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDCLSGKKIACLSYGS-GPHVVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V+   +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  ++AL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GSSGN--------------QPTPCRVSALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  + C
Sbjct: 11  SLCSEAELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDC 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   V L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LSGKKIACLSYGSGPHVVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 176 GCLQNKVV---VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVSALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 289

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 290 AACHSAHT 297


>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
          Length = 527

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 133/283 (46%), Gaps = 29/283 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P R+  L G  I  ++ G    H V    +G  Y WG N   QLG+G       P +V
Sbjct: 63  IEPRRIDILCGKKIISLSYG-TGPHVVIATADGEVYAWGHNGYSQLGNGTTNHGLTPALV 121

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
           S  L   ++ +   G  HT+ +T DG   A+G+N  GQ+GSGS  N+  P+P R   CL 
Sbjct: 122 STNLIGKRVTEVSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179

Query: 161 SEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++V    ACG      ++ ++       G    GQLG G +                Q  
Sbjct: 180 NKVVVNIACGQ--LCSMAVLDNGETYGWGYNCNGQLGLGNNGN--------------QQT 223

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  I++VACG  HT+A+  +G+VY+WG   YG+LG   + ++ VP  +++ +
Sbjct: 224 PCRIAALQGINIIQVACGYAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAVPTLINMDK 283

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
              V   E      S  S+     GQ+ MWG+ +  G    YP
Sbjct: 284 ERMV---EVAACHTSHTSAAKTQSGQVLMWGQCR--GQAVAYP 321



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 132/291 (45%), Gaps = 31/291 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VT +    A G N  G LG G  ++ IEP  +  L   ++ + + G    V
Sbjct: 28  GSAANEAIYVTVNDEVFALGTNCSGCLGLGDTQSTIEPRRIDILCGKKIISLSYGTGPHV 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ +G  +   G   Y QLG+GT N   T              P  ++  L G+ + +
Sbjct: 88  VIATADG-EVYAWGHNGYSQLGNGTTNHGLT--------------PALVSTNLIGKRVTE 132

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           V+CG++HT+A+ + G VY WG+   G++G     ++  PRRV    +N V+     I+ G
Sbjct: 133 VSCGSHHTIALTTDGEVYAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV---VNIACG 189

Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
            + S      G+ Y WG        L NNG+    P  +  L G N+  +  G  H    
Sbjct: 190 QLCSMAVLDNGETYGWGYNCNGQLGLGNNGNQQT-PCRIAALQGINIIQVACGYAHTLAL 248

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            D   + SWG   YG+LG G   + + A+P  +++ +   V   AC   H+
Sbjct: 249 TDEGFVYSWGANSYGQLGTG--NKSNQAVPTLINMDKERMVEVAACHTSHT 297



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 3/96 (3%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN  +P R+  L G++I  VA G    H +A+  EG  Y+WG N  GQLG G+K  +  
Sbjct: 218 NGNQQTPCRIAALQGINIIQVACG--YAHTLALTDEGFVYSWGANSYGQLGTGNKSNQAV 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFG 135
           PT+++   +  ++ A    SHT    T+ G  L +G
Sbjct: 276 PTLINMDKERMVEVAACHTSHTSAAKTQSGQVLMWG 311


>gi|118402069|ref|XP_001033354.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila]
 gi|89287702|gb|EAR85691.1| Viral A-type inclusion protein repeat containing protein
           [Tetrahymena thermophila SB210]
          Length = 1294

 Score =  119 bits (298), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 97/345 (28%), Positives = 161/345 (46%), Gaps = 43/345 (12%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRS 120
           VSC   H   +   G  YT G NE G+LG   K       P +V +LSK K      G+S
Sbjct: 63  VSCGEEHSAFITQRGHIYTIGSNEDGKLGISTKSITSSSTPCLVEDLSKIKCLSLSCGQS 122

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           HT+ V ++G    +G   +GQLG+GS  +   P+ +    +E     CG+  T+ L   +
Sbjct: 123 HTIAVMQNGEVYGWGDGSYGQLGNGSQESRFAPTRIVSENNEFIQVQCGSRHTILLDLKK 182

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
            A +   G  + GQLG         + + ++L          I  L  +  ++ ACG  H
Sbjct: 183 KAYV--CGSNENGQLG--------LRSTKIEL---------FIKKLDNKGFIEAACGQFH 223

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSS 298
           ++ +D +G VY+ G   +G+LG   + +++       F + N L  E +  I+AGS +S+
Sbjct: 224 SLLLDEQGRVYSTGANSFGQLGIGTKNNQY------EFTQINSLEGEQIVKIAAGS-HSA 276

Query: 299 CTAGGGQLYMWGKLKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHHFVGA---DSSCISW 354
                G++Y+WG       ++++P  +    SG     +  GN   F  A   + +  +W
Sbjct: 277 ALNKKGEMYIWG--TGVFGEYLFPNKINRHSSGTTFSDISVGNF--FAAAVDINGAVWTW 332

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G    GELG G Y  K+  +P+ +  L+G HV  + CG G ++ +
Sbjct: 333 GANSNGELGQGDYEPKT--LPQTLQALKGRHVQKICCGGGFAMAL 375



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 72/295 (24%), Positives = 123/295 (41%), Gaps = 44/295 (14%)

Query: 42  GNLVSPTRLRP--LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQR 98
           GN    +R  P  +V  +  F+   C S H + +D++ + Y  G NE GQLG    KI+ 
Sbjct: 145 GNGSQESRFAPTRIVSENNEFIQVQCGSRHTILLDLKKKAYVCGSNENGQLGLRSTKIE- 203

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
                + +L      +A  G+ H++++ E G   + G N  GQLG G+  N+ E + +  
Sbjct: 204 ---LFIKKLDNKGFIEAACGQFHSLLLDEQGRVYSTGANSFGQLGIGTKNNQYEFTQINS 260

Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAY 214
           L  E +   A G+               +A L + G++   G G   EY   +   + + 
Sbjct: 261 LEGEQIVKIAAGSH--------------SAALNKKGEMYIWGTGVFGEYLFPNKINRHS- 305

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
                       +G T   ++ G     AVD  G V+TWG    G LG  + + + +P+ 
Sbjct: 306 ------------SGTTFSDISVGNFFAAAVDINGAVWTWGANSNGELGQGDYEPKTLPQT 353

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
           +   +  +V   + +   G       A G +L    K + N +D    K ++D S
Sbjct: 354 LQALKGRHV---QKICCGGGF---AMALGYKLPKENKQQQNVNDKTIDKSIIDKS 402



 Score = 47.0 bits (110), Expect = 0.017,   Method: Composition-based stats.
 Identities = 60/272 (22%), Positives = 106/272 (38%), Gaps = 73/272 (26%)

Query: 137 NKHGQLGSGSI---RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           +K+GQLG G     +N   P  + C    +   +CG + + +++  +   I   G  + G
Sbjct: 32  DKYGQLGLGHKHQGKNYTIPK-ICCYNLIIRTVSCGEEHSAFIT--QRGHIYTIGSNEDG 88

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +LG  T +  ++              P  +  L+    + ++CG +HT+AV   G VY W
Sbjct: 89  KLGISTKSITSSS------------TPCLVEDLSKIKCLSLSCGQSHTIAVMQNGEVYGW 136

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G G YG+LG+  Q+  + P R+ V + N  +     +  GS ++                
Sbjct: 137 GDGSYGQLGNGSQESRFAPTRI-VSENNEFIQ----VQCGSRHTI--------------- 176

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
                      L+DL      C                   G  + G+LG      +S+ 
Sbjct: 177 -----------LLDLKKKAYVC-------------------GSNENGQLGL-----RSTK 201

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +   +  L+    I  ACG  HSL++ ++  V
Sbjct: 202 IELFIKKLDNKGFIEAACGQFHSLLLDEQGRV 233


>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 419

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 159/380 (41%), Gaps = 74/380 (19%)

Query: 35  RRKGALDGNLVSPTRLRPLVG--VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           +R+  L  + VS +     +G   D   VA  C S H +A+   G  Y+WG    GQLGH
Sbjct: 24  KRRPTLAIDDVSASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYSWGWGSMGQLGH 83

Query: 93  GDKIQRDRPTIVS--ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
           GD    + P  ++  E  + ++     G  H+  VT+DG    +G +  GQLG   +  E
Sbjct: 84  GDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLG---LPKE 140

Query: 151 IEPS----PVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
            E +    PV+C + E      +   +CG   T  L+S     +   G    GQLG G+ 
Sbjct: 141 YEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRG--DSGQLGIGSV 198

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
              + ++ S+  A     RP  + A  GE +V+VACG  H+ AV  +G+VY WG   YG 
Sbjct: 199 WMKDPENESLMGA----SRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGM 254

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
           LG  +  D+ +P+R++ F    VL     +S G  ++   A  G  Y +G+         
Sbjct: 255 LGVGQSSDQQIPKRLEYFDDIPVL----RVSCGGWHTVVVAKSGDCYAFGR--------- 301

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
                                                +YG LG G    KS   P  V  
Sbjct: 302 ------------------------------------GEYGRLGLG--DTKSRTRPHLVKA 323

Query: 381 LEGMHVISVACGYGHSLVIV 400
           L+G  VI  ACG  H+L + 
Sbjct: 324 LKGKTVIQAACGGSHTLFVT 343



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 96/234 (41%), Gaps = 27/234 (11%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG G           V     A   P+ I  L  E IV V+CG+ HT+A+ S G VY+
Sbjct: 17  GQLGTGAKRRPTLAIDDVS----ASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSGAVYS 72

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-- 310
           WG+G  G+LGH + K    P+++  F++  +      IS G  +S+     G LY+WG  
Sbjct: 73  WGWGSMGQLGHGDLKIINEPQKIAFFEQERL--EVDYISCGGCHSAAVTKDGTLYVWGES 130

Query: 311 -----------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
                      +  +       P P  +     ++    G     + +      WG    
Sbjct: 131 HWGQLGLPKEYEAAHESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDS 190

Query: 360 GELGYGPYGQKS--------SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+LG G    K         ++ P  +    G  V+ VACG  HS  + ++ +V
Sbjct: 191 GQLGIGSVWMKDPENESLMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGHV 244



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 3/139 (2%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C + H  AV  +G  Y WG+ + G LG G    +  P  +       + +   G
Sbjct: 224 KVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDIPVLRVSCG 283

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLS 177
             HTVVV + G+  AFG  ++G+LG G  ++   P  V+ L  + V   ACG   T++++
Sbjct: 284 GWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAACGGSHTLFVT 343

Query: 178 SVEGASILNAGLPQYGQLG 196
           S   A +  AG P +G+LG
Sbjct: 344 SDGTAYV--AGRPDHGRLG 360



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           DI  +   C   H V V   G CY +GR E G+LG GD   R RP +V  L    + +A 
Sbjct: 274 DIPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKTVIQAA 333

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-------RNEIEPSPVR 157
            G SHT+ VT DG +   G   HG+LG   +       R ++ P PVR
Sbjct: 334 CGGSHTLFVTSDGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVR 381


>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
           multifiliis]
          Length = 427

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 165/399 (41%), Gaps = 103/399 (25%)

Query: 34  GRRKGALDG-------NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
           G+ KG + G       N++ P  +  L  + I+ ++  C   H  A+  +G  YTWG  +
Sbjct: 101 GKNKGGILGHYDITSFNMIQPELVEKLENIQIKQIS--CGPFHMAAISQDGELYTWGNKD 158

Query: 87  RGQLGH-----GDKIQRDR-------------PTIVSELSKYKIKKAGAGRSHTVVVTED 128
            G+LGH      +K++  R             PT V  L+  K K+   G   TVV+TE+
Sbjct: 159 HGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTEN 218

Query: 129 GNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           G   +FG +  GQLG  S      +P  +  L   +    CG  F+  +SS     +   
Sbjct: 219 GEVYSFGNSMKGQLGYQSEETGNFQPKKIPDL-QNIINIDCGQQFSAAVSS--SGKVYTW 275

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   +GQLG+         + S+      Q RP  +    G  I+ ++CG N   A+ ++
Sbjct: 276 GNNDHGQLGN---------NQSI-----YQARPNQVTGFGGNKIINISCGDNFIAALSNE 321

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--GSVNSSCTAGGGQ 305
           G ++TWG+G  G+LGH  + D + P++++          E +I    G  +++      Q
Sbjct: 322 GKLFTWGYGNDGQLGHSNRNDLYAPKQIEF--------KEKIIKVDCGGTHTAFLTQNNQ 373

Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
           LY++G+                           GN                   G+LG G
Sbjct: 374 LYLFGR---------------------------GNE------------------GQLGIG 388

Query: 366 PYGQKSSAM---PKKVDILEGMHVISVACGYGHSLVIVD 401
              +  +A+   PK V+  + M V+ V CG  ++L I +
Sbjct: 389 ENIESEAAIRTTPKIVEFFKKMKVVDVTCGGEYTLAITE 427



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 154/346 (44%), Gaps = 37/346 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG    GQLG  ++  +  P  V +LS   I K  A +S ++ +++DG    +G NK 
Sbjct: 46  YAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSVSMALSQDGKVYTWGKNKG 105

Query: 140 GQLGSGSIR--NEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           G LG   I   N I+P  V  L + ++   +CG      +S  +   +   G   +G+LG
Sbjct: 106 GILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAIS--QDGELYTWGNKDHGKLG 163

Query: 197 H---GTDNEYNTKDSSVKLAY-EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           H      N+   K  +    Y E    P  + +L G    +V+CG   TV +   G VY+
Sbjct: 164 HEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENGEVYS 223

Query: 253 WGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
           +G    G+LG++ E+   + P+++   Q  N++     I  G   S+  +  G++Y W  
Sbjct: 224 FGNSMKGQLGYQSEETGNFQPKKIPDLQ--NIIN----IDCGQQFSAAVSSSGKVYTWGN 277

Query: 310 ---GKLKNNGDDWM-YPKPLMDLSG---WNLRCMDSGNMHHFVGADSS---CISWGHAQY 359
              G+L NN   +   P  +    G    N+ C D     +F+ A S+     +WG+   
Sbjct: 278 NDHGQLGNNQSIYQARPNQVTGFGGNKIINISCGD-----NFIAALSNEGKLFTWGYGND 332

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+LG+    +     PK+++  E   +I V CG  H+  +     +
Sbjct: 333 GQLGHS--NRNDLYAPKQIEFKE--KIIKVDCGGTHTAFLTQNNQL 374



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 31/182 (17%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           VY WG+G +G+LG   + +++ P+ V+     N++  +A  S     S   +  G++Y W
Sbjct: 45  VYAWGYGNFGQLGLANENNQYSPQEVEKLSDRNIIKVKANKSV----SMALSQDGKVYTW 100

Query: 310 GKLKN--------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYG 360
           GK K            + + P+ +  L    ++ +  G  H   +  D    +WG+  +G
Sbjct: 101 GKNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGELYTWGNKDHG 160

Query: 361 ELGYGPYGQKS-----------------SAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
           +LG+    QKS                 S +P KV  L G+    V+CG   ++V+ +  
Sbjct: 161 KLGH-EIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCKQVSCGGQFTVVLTENG 219

Query: 404 NV 405
            V
Sbjct: 220 EV 221


>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
           [Felis catus]
          Length = 551

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V    +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  I+AL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSSGN--------------QPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A   A +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPAPV-VVEKDRIIEIAACHLAHT--SAAKTQGGHVYMWGQCR 338



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + + +VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHLAHT 321


>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
          Length = 1287

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 165/369 (44%), Gaps = 54/369 (14%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G   +WG N  G LGH   I++  P  +  LS  ++K   AG  H++ +TE+G   +FG 
Sbjct: 567 GLILSWGANSDGVLGHTGGIEQLWPLAIESLSSVQVKMVAAGEFHSLCLTENGEVTSFGL 626

Query: 137 NKHGQLG--------SGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASIL 185
           N  GQ G        S  +     P P+     L  +   +     +   L + +G  + 
Sbjct: 627 NDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADG-ELY 685

Query: 186 NAGLPQYGQLGHGT-------DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
             G     QLGH T        N  + + +S + +Y  QP+P  ++AL G+ + +VACG 
Sbjct: 686 TFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSY-FQPKPTRLSALNGQVVKQVACGR 744

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H+  V  +G +YTWG G  G+LGH +  D+  P+RV+   ++ ++     ++ G  +S+
Sbjct: 745 FHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIM---VKVACGENHSA 801

Query: 299 CTAGGGQLYMWGKLKN----NGDDWM------------------YPKPLMDLSGWNLRCM 336
                G +Y  G  ++     GD+W+                   P  L  LS  +++ +
Sbjct: 802 AVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFV 861

Query: 337 DSGNMHHFVGADSS---CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
           D    H F  A ++     +WG      LG GP G  S   P  +  ++G  V+SVACG 
Sbjct: 862 DIACGHGFCAAITNRGLLYTWGKGT--ALGLGPSGDVSE--PTHLSSIDG--VVSVACGD 915

Query: 394 GHSLVIVDR 402
            H+  + D+
Sbjct: 916 IHAAALTDK 924



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 163/413 (39%), Gaps = 85/413 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG----------DKI 96
           P  +  L  V ++ VAAG    H + +   G   ++G N++GQ G              +
Sbjct: 591 PLAIESLSSVQVKMVAAG--EFHSLCLTENGEVTSFGLNDQGQCGQPITKIAESSDLAAV 648

Query: 97  QRDRPTIV-SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-------- 147
            R RP ++  +L K  +    AG  H+ +VT DG    FG     QLG  ++        
Sbjct: 649 ARPRPIVLPDDLRKKTVVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGN 708

Query: 148 ----------RNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
                      +  +P P R        V   ACG  F     + EGA +   G    GQ
Sbjct: 709 ALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACG-RFHSACVTEEGA-LYTWGRGANGQ 766

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGHG             +  +A P+ R  A +  + +VKVACG NH+ AVDS G +YT G
Sbjct: 767 LGHG------------DMTDQATPK-RVEAGIKDKIMVKVACGENHSAAVDSAGVIYTTG 813

Query: 255 FGGYGRLGHREQKDEWV---------------PRRVDVFQRNNVLPPEAV----ISAGSV 295
               G+LG   + DEW+                 R+  F   ++L    V    I+ G  
Sbjct: 814 GDESGQLG---KGDEWICATHGEGCTGSGWSCQERIPTFL--SILSVRHVQFVDIACGHG 868

Query: 296 NSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS- 349
             +     G LY WGK     L  +GD    P  L  + G  +  +  G++H     D  
Sbjct: 869 FCAAITNRGLLYTWGKGTALGLGPSGD-VSEPTHLSSIDG--VVSVACGDIHAAALTDKG 925

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH---VISVACGYGHSLVI 399
               WG ++ G LG G   +  +  PK V     +H    + V+ G  H+L I
Sbjct: 926 QLYMWGSSEAGRLGDGRSTEGVTRTPKLVPAFADIHQARCLGVSIGPRHALAI 978



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 131/311 (42%), Gaps = 54/311 (17%)

Query: 37  KGALDGNLVSPTRLRPLVGVD------IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           K A   +L +  R RP+V  D      +  +AAG    H   V  +G  YT+GR    QL
Sbjct: 638 KIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAG--GYHSALVTADGELYTFGRGGEFQL 695

Query: 91  GH---------GDKIQ-----------RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           GH         G+ +            + +PT +S L+   +K+   GR H+  VTE+G 
Sbjct: 696 GHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVKQVACGRFHSACVTEEGA 755

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
              +G   +GQLG G + ++  P  V   + +  +   ACG + +  + S     I   G
Sbjct: 756 LYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIMVKVACGENHSAAVDS--AGVIYTTG 813

Query: 189 LPQYGQLGHGTDNEYNTKDSSVK----LAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
             + GQLG G +    T             E  P   +I ++     V +ACG     A+
Sbjct: 814 GDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAI 873

Query: 245 DSKGYVYTWGFG---GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--GSVNSSC 299
            ++G +YTWG G   G G  G             DV +  ++   + V+S   G ++++ 
Sbjct: 874 TNRGLLYTWGKGTALGLGPSG-------------DVSEPTHLSSIDGVVSVACGDIHAAA 920

Query: 300 TAGGGQLYMWG 310
               GQLYMWG
Sbjct: 921 LTDKGQLYMWG 931



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 84/286 (29%), Positives = 115/286 (40%), Gaps = 61/286 (21%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PTRL  L G  ++ VA  C   H   V  EG  YTWGR   GQLGHGD   +  P  V  
Sbjct: 726 PTRLSALNGQVVKQVA--CGRFHSACVTEEGALYTWGRGANGQLGHGDMTDQATPKRVEA 783

Query: 107 LSKYKIK-KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-----------------SIR 148
             K KI  K   G +H+  V   G     G ++ GQLG G                 S +
Sbjct: 784 GIKDKIMVKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQ 843

Query: 149 NEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNAGLP-QYGQ---LGHGTDN 201
             I P+ +  L     +    ACG  F         A+I N GL   +G+   LG G   
Sbjct: 844 ERI-PTFLSILSVRHVQFVDIACGHGFC--------AAITNRGLLYTWGKGTALGLGPSG 894

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
           + +               P  ++++ G  +V VACG  H  A+  KG +Y WG    GRL
Sbjct: 895 DVS--------------EPTHLSSIDG--VVSVACGDIHAAALTDKGQLYMWGSSEAGRL 938

Query: 262 GHREQKD------EWVPRRVDVFQRNNV---LPPEAVISAGSVNSS 298
           G     +      + VP   D+ Q   +   + P   ++  S +SS
Sbjct: 939 GDGRSTEGVTRTPKLVPAFADIHQARCLGVSIGPRHALAISSTSSS 984


>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
 gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
          Length = 3806

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 151/327 (46%), Gaps = 29/327 (8%)

Query: 34   GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            GR    +  N+  P +L  L    ++ VA      H +A+ ++G+ ++WG  E G+LGHG
Sbjct: 2704 GRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHG 2763

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            ++   D+P +V  L   KI+    G SH+  ++  G    +G  ++G+LG G    +++P
Sbjct: 2764 NRTTLDKPRLVEALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGHGDNTTQLKP 2823

Query: 154  SPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              V  L    V   ACG+     L+  E  ++ + G   +G+LG G     +T       
Sbjct: 2824 KLVTALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDT------- 2876

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  I  L+G  +V++ CG   ++A+   G V+TWG G Y RLGH   +    P
Sbjct: 2877 -------PHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKP 2929

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDL 328
            + +   +   V+     ++ G+++       GQ+Y WG      + +G+ ++  KP + +
Sbjct: 2930 QPIGGLRGRRVIH----VAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKKPALVI 2985

Query: 329  SGWNLRCMDSGNMHHFVGADSSCISWG 355
                   +D+  ++      S  I+WG
Sbjct: 2986 G------LDAVFVNRVACGSSHSIAWG 3006



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/362 (28%), Positives = 168/362 (46%), Gaps = 42/362 (11%)

Query: 48   TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
            +RLRP+       +A G  S   V+ D  G+ Y  G    G+LG G       P  +  L
Sbjct: 2672 SRLRPI------HIAGGSKSLFIVSQD--GKVYACGEGTNGRLGLGVTHNVPLPHQLPVL 2723

Query: 108  SKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
             +Y +KK    +G  H + +T DG   ++G  + G+LG G+     +P  V  L   ++ 
Sbjct: 2724 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEALRAKKIR 2783

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              ACG+  +  +SS     +   GL +YG+LGHG        D++ +L      +P+ + 
Sbjct: 2784 DVACGSSHSAAISS--QGELYTWGLGEYGRLGHG--------DNTTQL------KPKLVT 2827

Query: 225  ALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ALAG  +V+VACG+    T+A+   G V++WG G +G+LG    +    P  ++      
Sbjct: 2828 ALAGRRVVQVACGSRDAQTLALTEDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSGIG 2887

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLRCM 336
            V+     I  G+  S      G+++ WGK     L + GD  +  P+P+  L G  +  +
Sbjct: 2888 VVQ----IECGAQFSLALTRAGEVWTWGKGDYYRLGHGGDQHVRKPQPIGGLRGRRVIHV 2943

Query: 337  DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
              G +H     D+  + +WG   +G+ G G      +  P  V  L+ + V  VACG  H
Sbjct: 2944 AVGALHCLAVTDAGQVYAWGDNDHGQQGSG--NTFVNKKPALVIGLDAVFVNRVACGSSH 3001

Query: 396  SL 397
            S+
Sbjct: 3002 SI 3003



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 152/346 (43%), Gaps = 38/346 (10%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D+      WG N++ QLG   G K++   PT    +S+ +      G     +V++DG  
Sbjct: 2638 DLPCTVMVWGLNDKEQLGGLKGSKVKV--PTFSQTISRLRPIHIAGGSKSLFIVSQDGKV 2695

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAG 188
             A G   +G+LG G   N   P  +  L   V +  A   G    + L +++G  + + G
Sbjct: 2696 YACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALAL-TLDG-KVFSWG 2753

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              + G+LGHG     +              +PR + AL  + I  VACG++H+ A+ S+G
Sbjct: 2754 EGEDGKLGHGNRTTLD--------------KPRLVEALRAKKIRDVACGSSHSAAISSQG 2799

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQL 306
             +YTWG G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +
Sbjct: 2800 ELYTWGLGEYGRLGHGDNTTQLKPKLVTALAGRRVVQ----VACGSRDAQTLALTEDGAV 2855

Query: 307  YMW-----GKLKNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            + W     GKL   G +    P  +  LSG  +  ++ G         +  + +WG   Y
Sbjct: 2856 FSWGDGDFGKLGRGGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDY 2915

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              LG+G  G +    P+ +  L G  VI VA G  H L + D   V
Sbjct: 2916 YRLGHG--GDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV 2959



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 27/256 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +A  C   H +A+D     Y+WG  E  +LGHGD   R  PT ++ L ++ ++    G S
Sbjct: 273 IAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCS 332

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV 179
           ++  +T  GN L +G   + +LG G+  +   P+ V  L    V   A G+     L+  
Sbjct: 333 YSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALT 392

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YG+LG+G     N   S   +  E+ PR           + +V  G+ 
Sbjct: 393 SEGLVFAWGDGDYGKLGNG-----NCNGSLQPILVESLPR-----------VQRVFAGSQ 436

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            +VA+ S+G +YTWG      LGH    R  +   VPR V   Q   ++     ++    
Sbjct: 437 FSVALSSEGQLYTWGKATC--LGHQLVERSVQGCSVPRLVSSLQHKRIVD----VAVSVA 490

Query: 296 NSSCTAGGGQLYMWGK 311
           +    +  G+++ WG+
Sbjct: 491 HCLALSSSGEVFGWGR 506



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 17/162 (10%)

Query: 215 EAQPRPRAIAALAGETIVKVA--CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           EA+P P  +  +A +  + +A  C   H +A+DS    Y+WG G   RLGH +     VP
Sbjct: 256 EAEPLP--MEEVAHDVFISIAGHCEGRHFLAIDSNHNAYSWGTGEDHRLGHGDTHARAVP 313

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLM 326
            ++   +++ V      +  G   S+    GG L  WG+         N DD   P  ++
Sbjct: 314 TKIAALEQHCV----QSVYCGCSYSAAITCGGNLLTWGRGTYARLGHGNSDDRSLPTLVV 369

Query: 327 DLSGWNLR--CMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            LS   +    + SG+ H   + ++    +WG   YG+LG G
Sbjct: 370 ALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNG 411


>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
 gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
          Length = 407

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 103/359 (28%), Positives = 163/359 (45%), Gaps = 43/359 (11%)

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           TR+ P+    I  V+ G  S H +A+  +G   TWG+N  GQLG G    R  P  V +L
Sbjct: 51  TRI-PIFASTILQVSGG--SFHSIALKSDGTVLTWGQNMHGQLGDGTNTDRKIPVQVKDL 107

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
           +   +     G  H+V +T DG    +G N  GQLG G+ ++  +P  V  L   +TA A
Sbjct: 108 N--NVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNL-KNITAIA 164

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
                 + L S    ++   G   YGQLG GT  + NT   +  L               
Sbjct: 165 SKGLHNLALKS--DGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSL--------------- 207

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
             TI+ +A G  H++A  + G ++TWG   YG+LG     +  +P  V      N +   
Sbjct: 208 -NTIISIAGGGYHSLAQKADGTIWTWGLNQYGQLGDGTITNRTIPVLV------NGIKDV 260

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNM 341
           ++I  G  +S      G +++WG  ++      + D+   P P+ DL   N+  +D G  
Sbjct: 261 SMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTPVPMGDLK--NIMTIDGGGD 318

Query: 342 HHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           H  +  +D +  +WG+ + G+LG G     S A P +   L   +V ++A G  HS+ +
Sbjct: 319 HSLILKSDGTVWTWGNNENGQLGDGT--TMSRATPIQASTLS--NVTAIASGEQHSIAL 373



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 147/346 (42%), Gaps = 54/346 (15%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L   ++  +A G    H VA+  +G  +TWG N  GQLG G    R++P  V+ 
Sbjct: 101 PVQVKDLN--NVTAIAGGA--WHSVALTSDGTVWTWGSNWAGQLGDGTTKSRNKPVQVNN 156

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L    I    +   H + +  DG    +G N +GQLG G+  +   P   R L + ++  
Sbjct: 157 LKN--ITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTTTDRNTPVQTRSLNTIISIA 214

Query: 167 ACG-------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             G       AD T+W            GL QYGQLG GT                    
Sbjct: 215 GGGYHSLAQKADGTIW----------TWGLNQYGQLGDGTITN----------------- 247

Query: 220 PRAIAALAG--ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            R I  L    + +  + CG +H++ + + G ++ WGF  +G+LG R   +   P  V +
Sbjct: 248 -RTIPVLVNGIKDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDNRSTP--VPM 304

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNL 333
               N++     I  G  +S      G ++ WG  +N    +G       P+   +  N+
Sbjct: 305 GDLKNIM----TIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMSRATPIQASTLSNV 360

Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
             + SG  H   + +D +  +WG  + G+LG G    +S+ +  K+
Sbjct: 361 TAIASGEQHSIALKSDGTIWAWGSNRNGQLGDGSISNRSTPVLVKI 406


>gi|170059416|ref|XP_001865354.1| regulator of chromosome condensation [Culex quinquefasciatus]
 gi|167878220|gb|EDS41603.1| regulator of chromosome condensation [Culex quinquefasciatus]
          Length = 293

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 19/169 (11%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVW 175
           GR+HT+ +T+ G   A G NK GQ G G+ +  I  +  R   S   +    CGADF++ 
Sbjct: 119 GRNHTLFLTDTGCVYACGDNKSGQCGVGNTQPIISKA-TRLNYSGPPIIKVGCGADFSMI 177

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET----- 230
           L  ++G ++ + GLP+YGQLGH TD +Y    +S K+++  +  P+ I     +T     
Sbjct: 178 LD-IKG-NLYSFGLPEYGQLGHNTDGKYFL--TSTKMSFHFETSPKQIVLYVEKTKEGHV 233

Query: 231 -------IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                  IV  ACG NH+VA+DSK   ++WGFGG GRLGH EQKDE VP
Sbjct: 234 TPMEDIRIVDFACGNNHSVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVP 282



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 24/123 (19%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK------------------------ 95
            +  GC +   + +D++G  Y++G  E GQLGH                           
Sbjct: 165 IIKVGCGADFSMILDIKGNLYSFGLPEYGQLGHNTDGKYFLTSTKMSFHFETSPKQIVLY 224

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
           +++ +   V+ +   +I     G +H+V +     + ++G+   G+LG    ++E+ PS 
Sbjct: 225 VEKTKEGHVTPMEDIRIVDFACGNNHSVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPSE 284

Query: 156 VRC 158
            +C
Sbjct: 285 NKC 287



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 26/46 (56%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           DIR V   C + H VA+D + R ++WG    G+LGH ++     P+
Sbjct: 238 DIRIVDFACGNNHSVAIDSKNRAFSWGFGGIGRLGHAEQKDEMVPS 283


>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
          Length = 551

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 141/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    +G  +
Sbjct: 66  EIFVLGTNCSGCLG--VGDIQST-IEPRRLDSLTGKKIASLSYGS-GPHIVLATTDGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    +CG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVMNISCGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G +Y WG   
Sbjct: 240 GSSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 338



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 139/308 (45%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCSGCLGVGDIQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   + L++ +G  +   G   Y QLG+GT N                
Sbjct: 95  LTGKKIASLSYGSGPHIVLATTDG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     IS G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 200 GCLQNKVVMN---ISCGQMCSMAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   I +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSAHT 321


>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
           [Felis catus]
          Length = 527

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 42  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNAYSQLGNGTTNHGLMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V    +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVNTGEVYVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  I+AL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GSSGN--------------QPTPCRISALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A   A +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPAPV-VVEKDRIIEIAACHLAHT--SAAKTQGGHVYMWGQCR 314



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + + +VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LMPCHISTNLSNKQVTEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G
Sbjct: 176 GCLQNKVV---VNIACGQMCSMAVVNTGEVYVWGYNGNGQLGLGSSGNQPTPCRISALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 233 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPAPV---VVEKDRIIEI 289

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 290 AACHLAHT 297


>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
 gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
          Length = 1015

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 133/275 (48%), Gaps = 34/275 (12%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           ++ V   C   H +A+  +GR ++WG N  GQLG G    + +P  ++ L+     +  A
Sbjct: 139 LQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
           G SH+ V+++ G    FG N  GQLG G   +   P+ V+ L S +VT  +CG + T  L
Sbjct: 199 GGSHSFVLSKSGAVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +   G     AG   YGQLGH ++N               +  PR +  L G  + ++AC
Sbjct: 259 TLDGGVLTFGAG--SYGQLGHNSNNH--------------EALPRKVFELMGLEVTQLAC 302

Query: 237 GTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD----VFQRNNVLPPEAVIS 291
           G  HT+A V+S G +Y++G GG G+LG +   +   P  VD     F  +N L  +  + 
Sbjct: 303 GRMHTMAYVESSGRIYSFGLGGNGQLGSKGTTNCNTPITVDGPFVPFAGDNSLEEQCYVV 362

Query: 292 AGSVNSSCTAGGGQLY-MWGKLKNNGDDWMYPKPL 325
                 + TAGG Q + +  KL+        PKPL
Sbjct: 363 -----QAITAGGDQAFALASKLQGT------PKPL 386



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 121/262 (46%), Gaps = 31/262 (11%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G +  CGS  +  +G+ KG        PT +  L    I+ V+  C   H + V+ + + 
Sbjct: 53  GTVYTCGSNDYGQLGQDKGH-----KRPTVITALDTQSIQQVS--CGDYHNLVVNDKYQV 105

Query: 80  YTWGRNERGQLGHGDKI---QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           ++WG ++ GQLGH  +       RP +V ELS  +I +   G  H++ ++ DG   ++G 
Sbjct: 106 FSWGYDDCGQLGHTLEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGN 165

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N HGQLG GS +N+ +P  +  L          G   +  LS  +  ++   G   +GQL
Sbjct: 166 NSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLS--KSGAVFGFGRNTFGQL 223

Query: 196 GHGT--DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           G G   D +Y                P  + +L    +  ++CG  HT  +   G V T+
Sbjct: 224 GLGDTGDRKY----------------PTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTF 267

Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
           G G YG+LGH     E +PR+V
Sbjct: 268 GAGSYGQLGHNSNNHEALPRKV 289



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 87/336 (25%), Positives = 149/336 (44%), Gaps = 35/336 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSEL---SKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           + WG    G+LG G  I+ D      E    +   +++   GR HTV V  +G     G 
Sbjct: 2   FCWGAARNGELGLGG-IEEDVILAPKEQPFGATKAMREVSCGRQHTVFVLAEGTVYTCGS 60

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N +GQLG    +    P+ +  L ++ +   +CG    + ++  +   + + G    GQL
Sbjct: 61  NDYGQLGQD--KGHKRPTVITALDTQSIQQVSCGDYHNLVVN--DKYQVFSWGYDDCGQL 116

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GH  +   N              RPR +  L+   IV+VACG  H++A+ + G +++WG 
Sbjct: 117 GHTLEAGGNNSR-----------RPRMVKELSSLQIVQVACGGKHSLALSNDGRIFSWGN 165

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---- 311
             +G+LG    K++  P+ +          P   I AG  +S   +  G ++ +G+    
Sbjct: 166 NSHGQLGIGSTKNQPKPQELTSLTG----IPFCQIVAGGSHSFVLSKSGAVFGFGRNTFG 221

Query: 312 ---LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPY 367
              L + GD   YP  +  L    +  +  G  H  V   D   +++G   YG+LG+   
Sbjct: 222 QLGLGDTGDR-KYPTHVKSLRSLKVTHISCGEEHTAVLTLDGGVLTFGAGSYGQLGHN-- 278

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
                A+P+KV  L G+ V  +ACG  H++  V+ +
Sbjct: 279 SNNHEALPRKVFELMGLEVTQLACGRMHTMAYVESS 314



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 157/350 (44%), Gaps = 38/350 (10%)

Query: 29  CWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
           CW A    +   G ++ +++   + +P  G         C   H V V  EG  YT G N
Sbjct: 3   CWGAARNGELGLGGIEEDVILAPKEQPF-GATKAMREVSCGRQHTVFVLAEGTVYTCGSN 61

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-- 143
           + GQLG  DK  + RPT+++ L    I++   G  H +VV +     ++G++  GQLG  
Sbjct: 62  DYGQLGQ-DKGHK-RPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQLGHT 119

Query: 144 -SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
                 N   P  V+ L S ++   ACG   ++ LS+     I + G   +GQLG G+  
Sbjct: 120 LEAGGNNSRRPRMVKELSSLQIVQVACGGKHSLALSN--DGRIFSWGNNSHGQLGIGS-- 175

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
              TK+         QP+P+ + +L G    ++  G +H+  +   G V+ +G   +G+L
Sbjct: 176 ---TKN---------QPKPQELTSLTGIPFCQIVAGGSHSFVLSKSGAVFGFGRNTFGQL 223

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC-TAGGGQLYM----WGKLKNNG 316
           G  +  D   P  V   +   V      IS G  +++  T  GG L      +G+L +N 
Sbjct: 224 GLGDTGDRKYPTHVKSLRSLKV----THISCGEEHTAVLTLDGGVLTFGAGSYGQLGHNS 279

Query: 317 DDW-MYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELG 363
           ++    P+ + +L G  +  +  G MH     +SS    S+G    G+LG
Sbjct: 280 NNHEALPRKVFELMGLEVTQLACGRMHTMAYVESSGRIYSFGLGGNGQLG 329


>gi|159039902|ref|YP_001539155.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918737|gb|ABW00165.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 546

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 102/340 (30%), Positives = 148/340 (43%), Gaps = 31/340 (9%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H VA+   G    WG N  GQLG G       P  VS  +        AGR H+V +T  
Sbjct: 98  HSVALTAAGTVLAWGDNSHGQLGDGTGADSLTPVGVSLPAGVTASAVAAGRDHSVALTSA 157

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
           G  LA+G N  GQLG G++ +   P  V    S  VTA A GA  +V L+S    ++L  
Sbjct: 158 GTVLAWGGNSFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGATHSVALTS--AGTVLAW 215

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   +GQLG GT  + +T              P A+A     T+  VA G NH+VA+ S 
Sbjct: 216 GGNPFGQLGDGTVVDRST--------------PVAVALPPSTTVTAVAAGGNHSVALTSA 261

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G V  WG   +G+LG     D   P  V +          + ++AG ++S      G + 
Sbjct: 262 GTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVT----ASAVAAGRIHSLALTTAGGVL 317

Query: 308 MW-----GKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHFVGADS--SCISWGHAQY 359
            W     G+L +           + L +   +  + + +  H V   S  + +SWG    
Sbjct: 318 AWGNNTFGQLGDGTTTTSSTPVSVTLPAATTITAISARDSQHSVAMTSAGAALSWGRNLR 377

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG G    +S+  P  V +  G+ V ++A G  HSL +
Sbjct: 378 GQLGDGTTTTRST--PVDVHLPTGVTVTAIAAGDDHSLAL 415



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 131/296 (44%), Gaps = 36/296 (12%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG N  G+LG+G       P  VS  +        AG +H+V +T  G  LA+G N HGQ
Sbjct: 59  WGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTAAGTVLAWGDNSHGQ 118

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGA--DFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG G+  + + P  V  L + VTA+A  A  D +V L+S    ++L  G   +GQLG GT
Sbjct: 119 LGDGTGADSLTPVGV-SLPAGVTASAVAAGRDHSVALTS--AGTVLAWGGNSFGQLGDGT 175

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
             + +T              P A+A     T+  VA G  H+VA+ S G V  WG   +G
Sbjct: 176 VVDRST--------------PVAVALPPSTTVTAVAAGATHSVALTSAGTVLAWGGNPFG 221

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLYMWGK--LKN 314
           +LG     D   P  V        LPP   ++   AG  +S      G +  WG+     
Sbjct: 222 QLGDGTVVDRSTPVAV-------ALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFGQ 274

Query: 315 NGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            GD    D   P  +   +G     + +G +H   +      ++WG+  +G+LG G
Sbjct: 275 LGDGTVVDRSTPTVVSLPAGVTASAVAAGRIHSLALTTAGGVLAWGNNTFGQLGDG 330



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/193 (31%), Positives = 85/193 (44%), Gaps = 22/193 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  VAAG    H VA+   G    WGRN  GQLG G  + R  PT+VS  +        A
Sbjct: 245 VTAVAAG--GNHSVALTSAGTVLAWGRNFFGQLGDGTVVDRSTPTVVSLPAGVTASAVAA 302

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA---DFTV 174
           GR H++ +T  G  LA+G N  GQLG G+            L +  T TA  A     +V
Sbjct: 303 GRIHSLALTTAGGVLAWGNNTFGQLGDGTTTTSST-PVSVTLPAATTITAISARDSQHSV 361

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            ++S   A  L+ G    GQLG GT    +T              P  +    G T+  +
Sbjct: 362 AMTSAGAA--LSWGRNLRGQLGDGTTTTRST--------------PVDVHLPTGVTVTAI 405

Query: 235 ACGTNHTVAVDSK 247
           A G +H++A+ + 
Sbjct: 406 AAGDDHSLALTAP 418



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 118/279 (42%), Gaps = 36/279 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G N  G+LG+G+  N   P  V     +   A A G   +V L++    ++L  G  
Sbjct: 57  LAWGSNFFGELGNGTTTNSSTPVDVSLPADTAAVAIAAGDAHSVALTA--AGTVLAWGDN 114

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            +GQLG GT  +  T              P  ++  AG T   VA G +H+VA+ S G V
Sbjct: 115 SHGQLGDGTGADSLT--------------PVGVSLPAGVTASAVAAGRDHSVALTSAGTV 160

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLY 307
             WG   +G+LG     D   P  V        LPP   ++   AG+ +S      G + 
Sbjct: 161 LAWGGNSFGQLGDGTVVDRSTPVAV-------ALPPSTTVTAVAAGATHSVALTSAGTVL 213

Query: 308 MWG--KLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
            WG       GD    D   P  +       +  + +G  H   + +  + ++WG   +G
Sbjct: 214 AWGGNPFGQLGDGTVVDRSTPVAVALPPSTTVTAVAAGGNHSVALTSAGTVLAWGRNFFG 273

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +LG G    +S+  P  V +  G+   +VA G  HSL +
Sbjct: 274 QLGDGTVVDRST--PTVVSLPAGVTASAVAAGRIHSLAL 310


>gi|328872806|gb|EGG21173.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 900

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 130/260 (50%), Gaps = 17/260 (6%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNER 87
           D+   +KG   G +V   +L PL+   I+      +S    +  AV   G+ +TWG NE+
Sbjct: 197 DSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWGFNEK 256

Query: 88  GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
           GQLG GD+     P  V   +   I     GR H  V+++ G+   +G    GQLG G +
Sbjct: 257 GQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKL 316

Query: 148 RNEIEPSPVRC------LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           ++ + P  V        L  +V   ACGA+FT+ L +V+G  + + G  +YGQLG   +N
Sbjct: 317 KSCLHPKKVLAFSEADQLNQKVRQVACGANFTMAL-TVDG-RLWSFGHGEYGQLGATEEN 374

Query: 202 EYN------TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           +Y         + + + A+     P+ + ALA   + +V CG  HT+ V     VY+WG+
Sbjct: 375 QYRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGW 434

Query: 256 GGYGRLGHREQKDEWVPRRV 275
           G  G LG  ++K + VP+RV
Sbjct: 435 GASGCLGFGDRKFQLVPQRV 454



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/425 (21%), Positives = 176/425 (41%), Gaps = 70/425 (16%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           AL+ + + P+ ++ L G  +R V + C   H +AV   G  Y++GR   GQLGH +K   
Sbjct: 17  ALEKDHLDPSVIQNLSG--MRIVMSACGEAHSLAVTEFGDVYSFGRGREGQLGHPEKYNT 74

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
             P +++ L+  +I +   G  H++ +T+ G    + W +  ++   +   E     +  
Sbjct: 75  AHPNVITALAHERITRVACGNFHSLALTDTGK--IYEWGQLHEIDKSAKGLEAPSGLIEM 132

Query: 159 --------LVSEVTATACGADFTVWLSSVEGASILNAGLPQY--------------GQLG 196
                   +  +  +     D   +  + +  S +N+   Q                  G
Sbjct: 133 KGIGFASRIAEQSLSQYLSGDKAAYDPTSKNISNVNSQSAQNEDAEDLTNKDEEFDAAAG 192

Query: 197 HGTDNEYNTKDSSV--KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            G D+  N +      K+    Q  P  + ++  + +V ++ G  ++ AV   G V+TWG
Sbjct: 193 SGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWAYSAAVTKSGKVFTWG 252

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---- 310
           F   G+LG  ++    +P++V  F   +++     +S G  +    +  G L+ WG    
Sbjct: 253 FNEKGQLGLGDRWFHGLPQQVKFFTNVHIVS----VSCGRQHIGVISDQGDLFTWGLGVF 308

Query: 311 ------KLKNNGDDWMYPKPLMDLS-----GWNLRCMDSG-NMHHFVGADSSCISWGHAQ 358
                 KLK+     ++PK ++  S        +R +  G N    +  D    S+GH +
Sbjct: 309 GQLGHGKLKS----CLHPKKVLAFSEADQLNQKVRQVACGANFTMALTVDGRLWSFGHGE 364

Query: 359 YGELGYGPYGQKSS------------------AMPKKVDILEGMHVISVACGYGHSLVIV 400
           YG+LG     Q                     A+P++V+ L  + V  V CG+ H++V+ 
Sbjct: 365 YGQLGATEENQYRDWNRGGNGNGNEREAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVT 424

Query: 401 DRTNV 405
           +  +V
Sbjct: 425 EDNDV 429



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 149/357 (41%), Gaps = 46/357 (12%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           ++G N++ QLGH  +     P+++  LS  +I  +  G +H++ VTE G+  +FG  + G
Sbjct: 5   SFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHSLAVTEFGDVYSFGRGREG 64

Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV-------------EGASILN 186
           QLG     N   P+ +  L  E +T  ACG   ++ L+               + A  L 
Sbjct: 65  QLGHPEKYNTAHPNVITALAHERITRVACGNFHSLALTDTGKIYEWGQLHEIDKSAKGLE 124

Query: 187 A--GLPQYGQLGHGT---DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
           A  GL +   +G  +   +   +   S  K AY+  P  + I+ +  ++           
Sbjct: 125 APSGLIEMKGIGFASRIAEQSLSQYLSGDKAAYD--PTSKNISNVNSQS-----AQNEDA 177

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL----PPEAVI--SAGSV 295
             + +K   +    G  G     EQK + + + VD  Q   +L      + V+  SAG  
Sbjct: 178 EDLTNKDEEFDAAAGSGGDDSQNEQKGKHIGKIVDRVQLTPLLVGSIKNQQVVDMSAGWA 237

Query: 296 NSSCTAGGGQLYMWGKLKNN----GDDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADS 349
            S+     G+++ WG  +      GD W +  P+ +   +  ++  +  G  H  V +D 
Sbjct: 238 YSAAVTKSGKVFTWGFNEKGQLGLGDRWFHGLPQQVKFFTNVHIVSVSCGRQHIGVISDQ 297

Query: 350 -SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE-----GMHVISVACGYGHSLVIV 400
               +WG   +G+LG+G    KS   PKKV            V  VACG   ++ + 
Sbjct: 298 GDLFTWGLGVFGQLGHGKL--KSCLHPKKVLAFSEADQLNQKVRQVACGANFTMALT 352



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/208 (25%), Positives = 92/208 (44%), Gaps = 30/208 (14%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +       IV V+CG  H   +  +G ++TWG G +G+LGH + K    P++V  F 
Sbjct: 270 PQQVKFFTNVHIVSVSCGRQHIGVISDQGDLFTWGLGVFGQLGHGKLKSCLHPKKVLAFS 329

Query: 280 RNNVLPPEA-VISAGSVNSSCTAGGGQLYMWG---------KLKNNGDDWM--------- 320
             + L  +   ++ G+  +      G+L+ +G           +N   DW          
Sbjct: 330 EADQLNQKVRQVACGANFTMALTVDGRLWSFGHGEYGQLGATEENQYRDWNRGGNGNGNE 389

Query: 321 --------YPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKS 371
                    P+ +  L+   ++ +  G++H  V   D+   SWG    G LG+G   +K 
Sbjct: 390 REAHLQYAVPQQVEALASVKVKQVTCGHLHTIVVTEDNDVYSWGWGASGCLGFG--DRKF 447

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
             +P++V  L G  V S++ G  HSLV+
Sbjct: 448 QLVPQRVPALSGEIVSSISAGEKHSLVV 475



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 17/124 (13%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
           ++FG NK  QLG    ++ ++PS ++ L    +  +ACG   +  L+  E   + + G  
Sbjct: 4   ISFGVNKQSQLGHALEKDHLDPSVIQNLSGMRIVMSACGEAHS--LAVTEFGDVYSFGRG 61

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           + GQLGH    +YNT              P  I ALA E I +VACG  H++A+   G +
Sbjct: 62  REGQLGH--PEKYNT------------AHPNVITALAHERITRVACGNFHSLALTDTGKI 107

Query: 251 YTWG 254
           Y WG
Sbjct: 108 YEWG 111



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 18/130 (13%)

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           S+++ G+ +  QLGH  + ++                P  I  L+G  IV  ACG  H++
Sbjct: 2   SVISFGVNKQSQLGHALEKDH--------------LDPSVIQNLSGMRIVMSACGEAHSL 47

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           AV   G VY++G G  G+LGH E+ +   P  +       +      ++ G+ +S     
Sbjct: 48  AVTEFGDVYSFGRGREGQLGHPEKYNTAHPNVITALAHERI----TRVACGNFHSLALTD 103

Query: 303 GGQLYMWGKL 312
            G++Y WG+L
Sbjct: 104 TGKIYEWGQL 113



 Score = 42.4 bits (98), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L  V ++ V   C   H + V  +   Y+WG    G LG GD+  +  P  V  
Sbjct: 399 PQQVEALASVKVKQVT--CGHLHTIVVTEDNDVYSWGWGASGCLGFGDRKFQLVPQRVPA 456

Query: 107 LSKYKIKKAGAGRSHTVVV-TEDGNSLAFGW 136
           LS   +    AG  H++VV + D  + AF +
Sbjct: 457 LSGEIVSSISAGEKHSLVVRSTDTTTFAFDY 487


>gi|58271668|ref|XP_572990.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57229249|gb|AAW45683.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 518

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 177/425 (41%), Gaps = 61/425 (14%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGC 65
           M  E       G +L CG T W   GR++   G +  +L+ P  LR L  V    +  G 
Sbjct: 1   MANESVEGSNWGRVLICGGTDWATNGRKERSSGKVPTDLMEPHILRSLCNVKASKIITGP 60

Query: 66  VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK-----KAGAGRS 120
            + + + +D+ G  Y +GR       +G  I  + P  +S  S    K        AGRS
Sbjct: 61  SANYAIILDIHGAAYLFGRPPAMVQSNG-VISENTPLKISPSSVGSPKGTKWVNGAAGRS 119

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTATACGADFTVW 175
           H ++V  +G+    G N  GQ+G           ++    VR   ++V     G  F+++
Sbjct: 120 HFLLVDSNGDVWGCGNNVVGQIGVPVAMVVEKLTKVAGPWVRDPEAKVVQVTAGHTFSLF 179

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      +  +G  ++GQLG+G   E   K    K+AY+ +     +  L    I ++A
Sbjct: 180 LTFT--GQVYASGSSEFGQLGNGKTGERLVKAG--KIAYDIELSQGLVQGLENVKITEIA 235

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H++A+D  GYVY+WGF GY RLG ++QKD  +                        
Sbjct: 236 SGNQHSLALDDNGYVYSWGFAGYSRLGLQDQKDRLI------------------------ 271

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA---DSSCI 352
             + T   GQ Y   + K+          + D+    +    SG   HF+     +   +
Sbjct: 272 -FALTGSTGQPYT--RFKH----------IQDVMACKVIKTSSGGCTHFITTPDPEGGVM 318

Query: 353 SWGHAQ---YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
           + G  Q   YGELG G    KS+  P+K+  L G+ +I V  G   +L +    +    L
Sbjct: 319 TVGFGQGVLYGELGLGSDSAKSATKPQKIIPLSGVDMIDVVGGAFFTLFLARPNSALSDL 378

Query: 410 DQVIL 414
           D+  L
Sbjct: 379 DRYPL 383


>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
          Length = 463

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 167/378 (44%), Gaps = 56/378 (14%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+   G   +WGR E GQLGHGD   R  PT+++  + +     G 
Sbjct: 22  VVLISAG--ASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLT--AAFDDAPGGV 77

Query: 118 ------GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
                 G  HT   +++   L ++GW   G+LG G+  +   P P++ L    +T  ACG
Sbjct: 78  ASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNPQPIQALQGVRITQIACG 137

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
                 L+      + + G  Q GQLG G     NT+DS +         P+ I A  G 
Sbjct: 138 DSHC--LAVTVAGHVHSWGRNQNGQLGLG-----NTEDSLL---------PQKIQAFEGV 181

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +  +A G  HT AV   G +Y WG+G YG LG  ++ D  +P +V       ++    +
Sbjct: 182 RVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQKMV----L 237

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++ G  ++   +  G +Y +G  K     +GD  D + P  L  L    +   ++  +  
Sbjct: 238 VACGWRHTITVSSSGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQEEAVELIF 297

Query: 344 F----------------VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
           F                + AD     WG  ++G++G G    +    P +V+      V+
Sbjct: 298 FFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGD--NEDHCSPVQVNFPNEQKVV 355

Query: 388 SVACGYGHSLVIVDRTNV 405
            VACG+ H+L + +  NV
Sbjct: 356 QVACGWRHTLALTEAKNV 373



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/306 (27%), Positives = 131/306 (42%), Gaps = 58/306 (18%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L GV I  +A  C   HC+AV V G  ++WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFNPQPIQALQGVRITQIA--CGDSHCLAVTVAGHVHSWGRNQNGQ 160

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+      P  +      ++K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 161 LGLGNTEDSLLPQKIQAFEGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDD 220

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY----- 203
            + P  V  +  + +   ACG   T+ +SS    SI   G  +YGQLGHG   ++     
Sbjct: 221 RLIPEKVSSVNGQKMVLVACGWRHTITVSS--SGSIYTYGWSKYGQLGHGDFEDHLVPHK 278

Query: 204 --------NTKDSSVKLAY----------------------------------------E 215
                    +++ +V+L +                                        E
Sbjct: 279 LEALKDTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNKFGQVGVGDNE 338

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               P  +     + +V+VACG  HT+A+     V++WG G  G+LGH E  D  +P+ +
Sbjct: 339 DHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNVFSWGRGTSGQLGHGEIVDRNIPKMI 398

Query: 276 DVFQRN 281
           D    +
Sbjct: 399 DALSSD 404



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 140/292 (47%), Gaps = 35/292 (11%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           V E  +  +    AG SH+V +   G   ++G  + GQLG G   +   P+ +     + 
Sbjct: 14  VPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPTVLTAAFDDA 73

Query: 163 ----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE-YNTKDSSVKLAYEAQ 217
                +   CGAD T   S  E   + + G   +G+LGHG  ++ +N             
Sbjct: 74  PGGVASVVICGADHTTAYSDEE-LQLYSWGWGDFGRLGHGNSSDVFN------------- 119

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P+ I AL G  I ++ACG +H +AV   G+V++WG    G+LG    +D  +P+++  
Sbjct: 120 --PQPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTEDSLLPQKIQA 177

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--MWGKLKNNG----DDWMYPKPLMDLSGW 331
           F+   V     +I+AG+ +++     G LY   WG+  N G    DD + P+ +  ++G 
Sbjct: 178 FEGVRV----KMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQ 233

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            +  +  G  H   V +  S  ++G ++YG+LG+G +  +   +P K++ L+
Sbjct: 234 KMVLVACGWRHTITVSSSGSIYTYGWSKYGQLGHGDF--EDHLVPHKLEALK 283



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 95/200 (47%), Gaps = 10/200 (5%)

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           +++  E      A+      ++V ++ G +H+VA+ S G V +WG G  G+LGH + +D 
Sbjct: 1   MEMEVEVAGDDEAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDR 60

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG-QLYMW-----GKLKN-NGDDWMYP 322
            VP  +     +      +V+  G+ +++  +    QLY W     G+L + N  D   P
Sbjct: 61  PVPTVLTAAFDDAPGGVASVVICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNP 120

Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           +P+  L G  +  +  G+ H   V       SWG  Q G+LG G    + S +P+K+   
Sbjct: 121 QPIQALQGVRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLG--NTEDSLLPQKIQAF 178

Query: 382 EGMHVISVACGYGHSLVIVD 401
           EG+ V  +A G  H+  + +
Sbjct: 179 EGVRVKMIAAGAEHTAAVTE 198



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 7/121 (5%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           A+  +G+ Y WG N+ GQ+G GD      P  V+  ++ K+ +   G  HT+ +TE  N 
Sbjct: 314 ALAADGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQKVVQVACGWRHTLALTEAKNV 373

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-------TACGADFTVWLSSVEGASI 184
            ++G    GQLG G I +   P  +  L S+ +A        A      VW+S  E  +I
Sbjct: 374 FSWGRGTSGQLGHGEIVDRNIPKMIDALSSDGSACKQLESSKAVPMSAKVWVSPSERYAI 433

Query: 185 L 185
           +
Sbjct: 434 V 434


>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
           latipes]
          Length = 527

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 128/274 (46%), Gaps = 27/274 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P R+  L G  I  ++ G    H V    +G  + WG N   QLG+G       P +V
Sbjct: 63  IEPRRIDVLCGKKIVSLSYG-TGPHVVIATADGEVFAWGHNGYSQLGNGTTNHGLTPALV 121

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
           S  L   ++ +   G  HT+ +T DG   A+G+N  GQ+GSGS  N+  P+P R   CL 
Sbjct: 122 STNLLGKRVTEVACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179

Query: 161 SEVTATA-CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           S+V     CG      ++ ++   I   G    GQLG G +                Q  
Sbjct: 180 SKVVVNVGCGQ--LCSMAVLDNGEIYGWGYNCNGQLGLGNNGN--------------QQT 223

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  +V+VACG  HT+A+  +G+VY WG   YG+LG   + ++ +P  ++  +
Sbjct: 224 PCRIAALQGVNVVQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKSNQALPTLINTDK 283

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
              V   E      S  S+     GQ+ MWG+ +
Sbjct: 284 ERMV---EVAACHTSHTSAAKTQSGQVLMWGQCR 314



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 132/291 (45%), Gaps = 31/291 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VT +    A G N  G LG G +++ IEP  +  L   ++ + + G    V
Sbjct: 28  GSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHV 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ +G  +   G   Y QLG+GT N   T              P  ++  L G+ + +
Sbjct: 88  VIATADG-EVFAWGHNGYSQLGNGTTNHGLT--------------PALVSTNLLGKRVTE 132

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++HT+A+ + G V+ WG+   G++G     ++  PRRV    ++ V+     +  G
Sbjct: 133 VACGSHHTIALTADGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQSKVV---VNVGCG 189

Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
            + S      G++Y WG        L NNG+    P  +  L G N+  +  G  H    
Sbjct: 190 QLCSMAVLDNGEIYGWGYNCNGQLGLGNNGNQQT-PCRIAALQGVNVVQVACGYAHTLAL 248

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            D   + +WG   YG+LG G   + + A+P  ++  +   V   AC   H+
Sbjct: 249 TDEGFVYAWGANSYGQLGTG--NKSNQALPTLINTDKERMVEVAACHTSHT 297


>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus laevis]
 gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
          Length = 526

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 31/278 (11%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P R+  L G  I  ++ G    H V V  +G  Y+WG N   QLG+G   Q   P 
Sbjct: 60  SIIEPRRIDMLSGKRIVSLSYGS-GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPC 118

Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
            VS  L   K      G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL 
Sbjct: 119 QVSTNLINKKAHSVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQ 178

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++ V   ACG   +  ++ V+   +   G    GQLG G+                 QP 
Sbjct: 179 NKTVIGIACGQMSS--MAVVDNGEVYAWGYNGNGQLGLGSSGN--------------QPT 222

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  + +V CG  HT+A+  +G +Y WG   YG+LG   + ++  P +V    
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQV---- 278

Query: 280 RNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
              ++  E ++   + +SS T+      GQ+YMWG+ +
Sbjct: 279 ---IVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCR 313



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 126/289 (43%), Gaps = 28/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           GAG +  + +T++      G N  G LG+G  ++ IEP  +  L    + + + G+   V
Sbjct: 28  GAG-NEVLYITKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHV 86

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            + + +G  + + G   Y QLG+G+ N             +A    +    L  +    V
Sbjct: 87  VIVTSDG-EVYSWGHNAYSQLGNGSTN-------------QALSPCQVSTNLINKKAHSV 132

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++ +   G VY WG+   G++G     ++ +PR+V    +N  +     I+ G 
Sbjct: 133 ACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQ 189

Query: 295 VNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD 348
           ++S      G++Y WG   N     G     P P  +  L G  +  +  G  H     D
Sbjct: 190 MSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTD 249

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
              + +WG   YG+LG G   + + + P +V + +   V   AC   H+
Sbjct: 250 EGVMYAWGANSYGQLGTG--NKSNQSYPVQVIVDKERIVEIAACHSSHT 296



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 75/190 (39%), Gaps = 54/190 (28%)

Query: 219 RPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            PR I  L+G+ IV ++ G+  H V V S G VY+WG   Y +LG+        P +V  
Sbjct: 63  EPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVST 122

Query: 278 FQRNNVLPPEA-VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
               N++  +A  ++ GS +S      G++Y                             
Sbjct: 123 ----NLINKKAHSVACGSHHSMVLTCDGEVY----------------------------- 149

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGH 395
                           +WG+   G++G G    +   +P+KV   L+   VI +ACG   
Sbjct: 150 ----------------AWGYNNSGQVGSGSTANQ--PIPRKVTSCLQNKTVIGIACGQMS 191

Query: 396 SLVIVDRTNV 405
           S+ +VD   V
Sbjct: 192 SMAVVDNGEV 201



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ +  V  G    H +A+  EG  Y WG N  GQLG G+K  +  P
Sbjct: 218 GNQPTPCRIAALQGIRVEQVVCG--YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP 275

Query: 102 TIVSELSKYKIKKAGAGRSHT 122
             V    +  ++ A    SHT
Sbjct: 276 VQVIVDKERIVEIAACHSSHT 296


>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
           containing protein 2 [Oryctolagus cuniculus]
          Length = 551

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/296 (30%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G        + + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCSGCLGLGDAQ---STIEPRRLDSLSGKKIACLSYGS-GPHVVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSG   N+  P  V  CL ++V    ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGPTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GSGGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 72/262 (27%), Positives = 109/262 (41%), Gaps = 30/262 (11%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLA 133
           V    +  G N  G LG GD      P  +  LS  KI     G   H V+ T +G    
Sbjct: 63  VNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVFT 122

Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQ 191
           +G N + QLG+G+  + + P  +   +S  +V   ACG+  ++ L+S     +   G   
Sbjct: 123 WGHNAYSQLGNGTTNHGLVPCQISTNLSNKQVIEVACGSYHSLVLTS--DGEVFAWGYNN 180

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYV 250
            GQ+G G                  QP PR +   L  + +V +ACG   ++AV   G V
Sbjct: 181 SGQVGSGPTAN--------------QPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEV 226

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           Y WG+ G G+LG     ++  P RV   Q   V      ++ G  ++      GQ+Y WG
Sbjct: 227 YVWGYNGNGQLGLGSGGNQPTPCRVAALQGIRV----QRVACGYAHTLVLTDEGQVYAWG 282

Query: 311 KLK------NNGDDWMYPKPLM 326
                     N  +  YP P++
Sbjct: 283 ANSYGQLGTGNKSNQSYPTPVV 304



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 137/308 (44%), Gaps = 34/308 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G   +  +  T +      G N  G LG G  ++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGNAGNEVLYSTVNDEIFVLGTNCSGCLGLGDAQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   V L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LSGKKIACLSYGSGPHVVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCQISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGPTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSG 330
              +N V+     I+ G + S      G++Y+WG   N      +G +   P  +  L G
Sbjct: 200 GCLQNKVV---VNIACGQMCSMAVVDTGEVYVWGYNGNGQLGLGSGGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I +
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEI 313

Query: 390 -ACGYGHS 396
            AC   H+
Sbjct: 314 AACHSTHT 321


>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
 gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
          Length = 1052

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 152/331 (45%), Gaps = 30/331 (9%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T +G   A G N
Sbjct: 4   YCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNN 63

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            H QLG         P P       V   ACG+  ++ L+  E   IL+ G    GQ+GH
Sbjct: 64  DHHQLGHELPTKRPLPIP-ELQAYVVIQIACGSRHSMALT--EWGQILSWGDNDCGQVGH 120

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            TDN+       ++L       P+ +  L   T+V++ACG NH++A+ S G +Y+WG   
Sbjct: 121 STDNDV------IEL-------PKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNI 167

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG +  KD  +P      +   +L  P A I+ G  +S   +    ++ WGK     
Sbjct: 168 YGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ 225

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+  +  YP  L  +    +R +  G+ +  F+  +    + G   YG+LG+G    
Sbjct: 226 LGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHG--AS 283

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 284 NNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 27/236 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
           P  LR LV   +  V   C + H +A+   G  Y+WG N  GQLG     D    + P  
Sbjct: 130 PKILRFLVSRTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLR 187

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS 161
           ++ +    +     G +H+ ++++  +S  FGW K+  GQLG    +N   PS ++ + +
Sbjct: 188 LTTILGIPLATIACGGNHSFLISK--SSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRT 245

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V    CG +++V+L++  G     AG   YGQLGHG  N               +  P
Sbjct: 246 LGVRFVTCGDEYSVFLTNEGGVFTCGAG--NYGQLGHGASNN--------------EMIP 289

Query: 221 RAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           R +  L G TI +VACG  HT+A V S G VY++G G  G+LG R    + +P+ V
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 31/325 (9%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            C   H + +   G+ Y  G N+  QLGH  ++   RP  + EL  Y + +   G  H++
Sbjct: 42  ACGHRHTLFLTANGQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSM 99

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEG 181
            +TE G  L++G N  GQ+G  +  + IE P  +R LVS  V   ACG + ++ L+S   
Sbjct: 100 ALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSC-- 157

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             + + G   YGQLG  +  +    ++           P  +  + G  +  +ACG NH+
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNA-----------PLRLTTILGIPLATIACGGNHS 206

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
             +     V+ WG    G+LG  ++++   P ++   +   V      ++ G   S    
Sbjct: 207 FLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGV----RFVTCGDEYSVFLT 262

Query: 302 GGGQLYM-----WGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCIS 353
             G ++      +G+L +   ++ M P+ +++L G  +  +  GN H      S     S
Sbjct: 263 NEGGVFTCGAGNYGQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYS 322

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKV 378
           +G    G+L  G     S  +PK V
Sbjct: 323 FGLGASGQL--GTRNTISQTLPKVV 345



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 83/178 (46%), Gaps = 4/178 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G +      +  +P RL  ++G+ +  +A G    H   +      
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACG--GNHSFLISKSSAV 215

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG+N  GQLG  D+  R  P+ +  +    ++    G  ++V +T +G     G   +
Sbjct: 216 FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNY 275

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           GQLG G+  NE+ P  V  L+ S +T  ACG   T+ L    G  + + GL   GQLG
Sbjct: 276 GQLGHGASNNEMIPRMVIELMGSTITQVACGNRHTLALVP-SGGRVYSFGLGASGQLG 332


>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 31/278 (11%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P R+  L G  I  ++ G    H V V  +G  Y+WG N   QLG+G   Q   P 
Sbjct: 60  SIIEPRRIDMLSGKRIVSLSYGS-GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPC 118

Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
            VS  L   K      G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL 
Sbjct: 119 QVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQ 178

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++ V   ACG   +  ++ V+   +   G    GQLG G+                 QP 
Sbjct: 179 NKTVIGIACGQMSS--MAVVDNGEVYAWGYNGNGQLGLGSSGN--------------QPT 222

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  + +V CG  HT+A+  +G +Y WG   YG+LG   + ++  P +V    
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQV---- 278

Query: 280 RNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
              ++  E ++   + +SS T+      GQ+YMWG+ +
Sbjct: 279 ---IVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCR 313



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 71/289 (24%), Positives = 127/289 (43%), Gaps = 28/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           GAG +  + +T++      G N  G LG+G  ++ IEP  +  L    + + + G+   V
Sbjct: 28  GAG-NEVLYLTKNDEVFVMGTNSSGCLGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHV 86

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            + + +G  + + G   Y QLG+G+ N             +A    +    L  +  + V
Sbjct: 87  VIVTSDG-EVYSWGHNAYSQLGNGSTN-------------QALSPCQVSTNLINKKAISV 132

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++ +   G VY WG+   G++G     ++ +PR+V    +N  +     I+ G 
Sbjct: 133 ACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQ 189

Query: 295 VNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD 348
           ++S      G++Y WG   N     G     P P  +  L G  +  +  G  H     D
Sbjct: 190 MSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTD 249

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
              + +WG   YG+LG G   + + + P +V + +   V   AC   H+
Sbjct: 250 EGVMYAWGANSYGQLGTG--NKSNQSYPVQVIVDKERIVEIAACHSSHT 296



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 54/190 (28%)

Query: 219 RPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            PR I  L+G+ IV ++ G+  H V V S G VY+WG   Y +LG+        P +V  
Sbjct: 63  EPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVST 122

Query: 278 FQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
               N++  +A+ ++ GS +S      G++Y                             
Sbjct: 123 ----NLINKKAISVACGSHHSMVLTCDGEVY----------------------------- 149

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGH 395
                           +WG+   G++G G    +   +P+KV   L+   VI +ACG   
Sbjct: 150 ----------------AWGYNNSGQVGSGSTANQ--PIPRKVTSCLQNKTVIGIACGQMS 191

Query: 396 SLVIVDRTNV 405
           S+ +VD   V
Sbjct: 192 SMAVVDNGEV 201



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ +  V  G    H +A+  EG  Y WG N  GQLG G+K  +  P
Sbjct: 218 GNQPTPCRIAALQGIRVEQVVCG--YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP 275

Query: 102 TIVSELSKYKIKKAGAGRSHT 122
             V    +  ++ A    SHT
Sbjct: 276 VQVIVDKERIVEIAACHSSHT 296


>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
           rubripes]
          Length = 527

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 129/274 (47%), Gaps = 27/274 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P R+  L G  I  ++ G    H      +G  ++WG N   QLG+G       P +V
Sbjct: 63  IEPRRIDVLCGKKIVSLSYG-TGPHVAIATADGEVFSWGHNGYSQLGNGTSTHGLTPALV 121

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
           S  L   ++ +   G  HT+ +T DG   A+G+N  GQ+GSGS  N+  P+P R   CL 
Sbjct: 122 STNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179

Query: 161 SEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++V    ACG      ++ ++   I   G    GQLG G +                Q  
Sbjct: 180 NKVVVNIACGQ--LCSMAVLDSGEIYGWGYNCNGQLGLGNNGN--------------QQT 223

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  +++VACG  HT+A+  +G+VY+WG   YG+LG   + ++ VP  ++  +
Sbjct: 224 PCRIAALQGVNVIQVACGYAHTIALTDEGFVYSWGANSYGQLGTGNKCNQAVPTLINTEK 283

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
                  E      S  S+     GQ+ MWG+ +
Sbjct: 284 ER---MSEVAACHTSHTSAAKTQSGQVLMWGQCR 314



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 131/289 (45%), Gaps = 67/289 (23%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VT +    A G N  G LG G +++ IEP  +  L   ++ + + G    V
Sbjct: 28  GSAANEALYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDVLCGKKIVSLSYGTGPHV 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ +G  + + G   Y QLG+GT     T              P  ++  L G+ +++
Sbjct: 88  AIATADG-EVFSWGHNGYSQLGNGTSTHGLT--------------PALVSTNLLGKRVIE 132

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++HT+A+ + G V+ WG+   G++G     ++  PRRV    +N V+         
Sbjct: 133 VACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKVV--------- 183

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
            VN +C    GQL                         ++  +DSG ++           
Sbjct: 184 -VNIAC----GQL------------------------CSMAVLDSGEIY----------G 204

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           WG+   G+LG G  G + +  P ++  L+G++VI VACGY H++ + D 
Sbjct: 205 WGYNCNGQLGLGNNGNQQT--PCRIAALQGVNVIQVACGYAHTIALTDE 251


>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           impatiens]
          Length = 1088

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/230 (32%), Positives = 117/230 (50%), Gaps = 20/230 (8%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSEL 107
           R+   +G  I  V   C   H +A+   G  Y+WG N  GQLG G  I+ + +P +++ L
Sbjct: 161 RMVKTLGTSI-IVQVACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRSEVKPKLINTL 219

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
           +   I     G  H++ +++ G    +G N  GQLG    +N   P  ++ L  +++   
Sbjct: 220 AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYA 279

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACG +F+V+L+   G     AG+  YGQLGHG++N               +  PR +  L
Sbjct: 280 ACGEEFSVFLTVDGGVFTCGAGM--YGQLGHGSNNN--------------EILPRQVMEL 323

Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            G T+ +++CG  HT+A V S+G VY WG GG G+LG+   +    P+ V
Sbjct: 324 MGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVV 373



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 172/371 (46%), Gaps = 36/371 (9%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA 63
           +  E +++ +    K G++   G+T    +G   G  D  ++ P ++      +I+ +A 
Sbjct: 15  MACEPVIKGQKSLLKKGDMFCWGNTRHGELGL-GGIEDEIILVPCQVDFKKASEIQQIAC 73

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           G    + V +  +G+ Y+ G N+ GQLGH  +  R R  ++  L  +  KK   G  HT+
Sbjct: 74  G--ENYTVVITHDGKIYSCGNNDYGQLGH--ERGRKRLQLILGLDAFVFKKVACGAYHTI 129

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
            V E G   ++G N  GQLG  S +N +E SP  V+ L  S +   ACG    + L++  
Sbjct: 130 AVNEWGQLFSWGSNSEGQLGLNS-KNFMECSPRMVKTLGTSIIVQVACGMKHALALTN-- 186

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              + + G    GQLG G D               ++ +P+ I  LAG  I  +ACG  H
Sbjct: 187 NGELYSWGSNSEGQLGLGVD-------------IRSEVKPKLINTLAGVPIAFIACGGYH 233

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC- 299
           ++A+   G ++ WG   +G+LG  + ++  +P ++    RN  +   A     SV  +  
Sbjct: 234 SIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQLQTL-RNAKICYAACGEEFSVFLTVD 292

Query: 300 ----TAGGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
               T G G   M+G+L + + ++ + P+ +M+L G  +  +  G  H    V +     
Sbjct: 293 GGVFTCGAG---MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVY 349

Query: 353 SWGHAQYGELG 363
           +WG    G+LG
Sbjct: 350 AWGLGGAGQLG 360



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 148/341 (43%), Gaps = 44/341 (12%)

Query: 76  EGRCYTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
           +G  + WG    G+LG G   D+I    P  V      +I++   G ++TVV+T DG   
Sbjct: 30  KGDMFCWGNTRHGELGLGGIEDEIIL-VPCQVDFKKASEIQQIACGENYTVVITHDGKIY 88

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACGADFTVWLSSVEGASILNA 187
           + G N +GQLG    R  ++      L+  + A      ACGA  T+ ++  E   + + 
Sbjct: 89  SCGNNDYGQLGHERGRKRLQ------LILGLDAFVFKKVACGAYHTIAVN--EWGQLFSW 140

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    GQLG  + N               +  PR +  L    IV+VACG  H +A+ + 
Sbjct: 141 GSNSEGQLGLNSKNF-------------MECSPRMVKTLGTSIIVQVACGMKHALALTNN 187

Query: 248 GYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
           G +Y+WG    G+LG   + + E  P+ ++         P A I+ G  +S   +  G +
Sbjct: 188 GELYSWGSNSEGQLGLGVDIRSEVKPKLINTLAG----VPIAFIACGGYHSIAISKSGAI 243

Query: 307 YMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQY 359
           + WGK        N+  +   P  L  L    +     G     F+  D    + G   Y
Sbjct: 244 FGWGKNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMY 303

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+LG+G     +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 304 GQLGHG--SNNNEILPRQVMELMGSTVTQISCGKRHTLALV 342



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/156 (37%), Positives = 76/156 (48%), Gaps = 4/156 (2%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V P  +  L GV I F+A G    H +A+   G  + WG+N  GQLG  D   R+ P  +
Sbjct: 211 VKPKLINTLAGVPIAFIACG--GYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPHQL 268

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
             L   KI  A  G   +V +T DG     G   +GQLG GS  NEI P  V  L+ S V
Sbjct: 269 QTLRNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTV 328

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           T  +CG   T+ L   +G  +   GL   GQLG+ +
Sbjct: 329 TQISCGKRHTLALVPSQG-RVYAWGLGGAGQLGNNS 363


>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           mellifera]
          Length = 1081

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 164/400 (41%), Gaps = 75/400 (18%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA 63
           L  E ++  E    K  ++   GST    +G   G  D N++ P  L      +I+ +A 
Sbjct: 10  LANEPVIAVEYPLHKKKDMFCWGSTIHGELGL-GGIEDENILIPRELDFKKAAEIQQIAC 68

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           G    + V +   G  Y+ G N+ GQLGH     R R  ++  L  +  KKA  G  HT+
Sbjct: 69  G--ENYTVVITQIGEIYSCGNNDYGQLGHEKG--RKRLQLIPGLDAFVFKKAACGAYHTL 124

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
            + E G   ++G N  GQLG  S +N +E SP  V+ L  S V   ACG      L++  
Sbjct: 125 AINEWGQLFSWGSNTEGQLGLNS-KNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN-- 181

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              + + G    GQLG GTD +Y  K             P+ I+A  G  I  +ACG  H
Sbjct: 182 NGELYSWGSNSEGQLGLGTDTKYEIK-------------PKFISAFIGIPIAFIACGGYH 228

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           ++A+   G V+ WG   +G+LG  + +D  +P ++   Q   +               C 
Sbjct: 229 SIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI---------------CY 273

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           A  G+                                      F+  D    + G   YG
Sbjct: 274 AACGE----------------------------------EFSVFLTVDGGVFTCGAGMYG 299

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +LG+G     +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 300 QLGHG--SNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 113/233 (48%), Gaps = 20/233 (8%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIV 104
           S  R+   +G  +  V   C   H  A+   G  Y+WG N  GQLG G   + + +P  +
Sbjct: 153 SSPRMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDTKYEIKPKFI 211

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
           S      I     G  H++ +++ G    +G N  GQLG    ++   P  ++ L  +++
Sbjct: 212 SAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI 271

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG +F+V+L+   G     AG+  YGQLGHG+++               +  PR +
Sbjct: 272 CYAACGEEFSVFLTVDGGVFTCGAGM--YGQLGHGSNSN--------------EILPRQV 315

Query: 224 AALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             L G T+ +++CG  HT+A V S+G VY WG GG G+LG+   +    P+ V
Sbjct: 316 MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +   +G+ I F+A G    H +A+   G  + WG+N  GQLG  D   R+ P  +
Sbjct: 206 IKPKFISAFIGIPIAFIACG--GYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQL 263

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
             L   KI  A  G   +V +T DG     G   +GQLG GS  NEI P  V  L+ S V
Sbjct: 264 QTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTV 323

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           T  +CG   T+ L    G  +   GL   GQLG+ +     T
Sbjct: 324 TQISCGKRHTLALVPSRG-RVYAWGLGGAGQLGNHSTRSVTT 364


>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
           terrestris]
          Length = 1104

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 128/259 (49%), Gaps = 26/259 (10%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSEL 107
           R+   +G  I  V   C   H +A+   G  Y+WG N  GQLG G  I+ + +P +++ L
Sbjct: 177 RMVKTLGTSI-IVQIACGMKHALALTNNGELYSWGSNSEGQLGLGVDIRCEMKPKLINTL 235

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
           +   I     G  H++ +++ G    +G N  GQLG    +N   P  ++ L  ++V   
Sbjct: 236 AGVPIAFIACGGYHSIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYA 295

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACG +F+V+L+   G     AG+  YGQLGHG++N               +  PR +  L
Sbjct: 296 ACGEEFSVFLTVDGGVFTCGAGM--YGQLGHGSNNN--------------EILPRQVMEL 339

Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            G T+ +++CG  HT+A V S+G VY WG GG G+LG+   +    P+ V    R   + 
Sbjct: 340 MGSTVTQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVV----RGPWVA 395

Query: 286 PE--AVISAGSVNSSCTAG 302
           P   +++      SSCT G
Sbjct: 396 PNGSSMMDFDKQFSSCTVG 414



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 175/386 (45%), Gaps = 38/386 (9%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA 63
           L  E ++E +    K  ++   G+T    +G   G  D  ++ P  +      +I+ +A 
Sbjct: 31  LACEPVIEVQKSLLKKEDMFCWGNTRHGELGL-GGIEDEIILVPCEVDFKKASEIQQIAC 89

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           G    + V +  +G+ Y+ G N+ GQLGH     R R  ++  L  +  KKA  G  HT+
Sbjct: 90  G--ENYTVVITHDGKIYSCGNNDYGQLGHEQG--RKRLQLILGLDAFVFKKAACGAYHTI 145

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
            V E G   ++G N  GQLG  S +N +E SP  V+ L  S +   ACG    + L++  
Sbjct: 146 AVNEWGQLFSWGSNSEGQLGLNS-KNFMECSPRMVKTLGTSIIVQIACGMKHALALTN-- 202

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              + + G    GQLG G D                + +P+ I  LAG  I  +ACG  H
Sbjct: 203 NGELYSWGSNSEGQLGLGVD-------------IRCEMKPKLINTLAGVPIAFIACGGYH 249

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC- 299
           ++A+   G ++ WG   +G+LG  + ++  +P ++    RN  +   A     SV  +  
Sbjct: 250 SIAISKSGAIFGWGKNTFGQLGLNDTQNRNLPYQLQTL-RNAKVCYAACGEEFSVFLTVD 308

Query: 300 ----TAGGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
               T G G   M+G+L + + ++ + P+ +M+L G  +  +  G  H    V +     
Sbjct: 309 GGVFTCGAG---MYGQLGHGSNNNEILPRQVMELMGSTVTQISCGKRHTLALVPSQGRVY 365

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKV 378
           +WG    G+LG      +S+  P+ V
Sbjct: 366 AWGLGGAGQLGNN--STRSTTTPQVV 389



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 146/337 (43%), Gaps = 44/337 (13%)

Query: 80  YTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           + WG    G+LG G   D+I    P  V      +I++   G ++TVV+T DG   + G 
Sbjct: 50  FCWGNTRHGELGLGGIEDEIIL-VPCEVDFKKASEIQQIACGENYTVVITHDGKIYSCGN 108

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTA-----TACGADFTVWLSSVEGASILNAGLPQ 191
           N +GQLG    R  ++      L+  + A      ACGA  T+ ++  E   + + G   
Sbjct: 109 NDYGQLGHEQGRKRLQ------LILGLDAFVFKKAACGAYHTIAVN--EWGQLFSWGSNS 160

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            GQLG  + N               +  PR +  L    IV++ACG  H +A+ + G +Y
Sbjct: 161 EGQLGLNSKNF-------------MECSPRMVKTLGTSIIVQIACGMKHALALTNNGELY 207

Query: 252 TWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           +WG    G+LG   + + E  P+ ++         P A I+ G  +S   +  G ++ WG
Sbjct: 208 SWGSNSEGQLGLGVDIRCEMKPKLINTLAG----VPIAFIACGGYHSIAISKSGAIFGWG 263

Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELG 363
           K        N+  +   P  L  L    +     G     F+  D    + G   YG+LG
Sbjct: 264 KNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLG 323

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +G     +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 324 HG--SNNNEILPRQVMELMGSTVTQISCGKRHTLALV 358


>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
           [Desmodus rotundus]
          Length = 511

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 139/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 52  EIFVLGTNCCGCLGL--GDIQST-IEPRRLDSLSGKKIACLSYG-SGPHIVLATTEGEVF 107

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G N  
Sbjct: 108 TWGHNAYNQLGNGTTNHGSVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNS 167

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL + V    ACG   +  ++ V+   +   G    GQLG 
Sbjct: 168 GQVGSGSTANQPIPRRVTGCLQNRVVVNIACGQMCS--MAVVDSGEVYVWGYNGNGQLGL 225

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+   ++T              P  IAAL G  + +VACG  HT+ +   G VY WG   
Sbjct: 226 GSSGNHST--------------PCRIAALQGIRVQRVACGYAHTLVLTDDGQVYAWGANS 271

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 272 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 324



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/305 (25%), Positives = 133/305 (43%), Gaps = 70/305 (22%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  + +T +      G N  G LG G I++ IEP  +  
Sbjct: 21  SLCSEEELQLIRQACVFGSAGNEVLYMTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDS 80

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N  +             
Sbjct: 81  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYNQLGNGTTNHGSV------------ 127

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG    G++G     ++ +PRRV 
Sbjct: 128 --PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGCNNSGQVGSGSTANQPIPRRVT 185

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
              +N V+     I+ G + S      G++Y+W                    G+N    
Sbjct: 186 GCLQNRVV---VNIACGQMCSMAVVDSGEVYVW--------------------GYN---- 218

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             GN                   G+LG G  G  S+  P ++  L+G+ V  VACGY H+
Sbjct: 219 --GN-------------------GQLGLGSSGNHST--PCRIAALQGIRVQRVACGYAHT 255

Query: 397 LVIVD 401
           LV+ D
Sbjct: 256 LVLTD 260


>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
          Length = 3628

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 102/350 (29%), Positives = 164/350 (46%), Gaps = 36/350 (10%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGN 130
            V  EG+ Y  G    G+LG GD      P  +  LS++ IKK    +G  H + +T+DG 
Sbjct: 2637 VSQEGKLYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGK 2696

Query: 131  SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
              ++G  + G+LG G+  +  +P  +  L S+ +   ACG+  +  ++S     +   GL
Sbjct: 2697 VFSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIAS--NGELYTWGL 2754

Query: 190  PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSK 247
             +YG+LGHG                  Q RP+ + AL G+ +V+VACG+    T+A+ + 
Sbjct: 2755 GEYGRLGHGDT--------------ITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTD 2800

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G VY+WG G +G+LG       + P  VD      V+  E     G+  S      G+++
Sbjct: 2801 GCVYSWGDGDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVE----CGAQFSLALTKYGEVW 2856

Query: 308  MWGK----LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
             WGK       +G+D    KP +   L G  +  +  G +H     D+  + +WG   +G
Sbjct: 2857 TWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQVYAWGDNDHG 2916

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL--VIVDRTNVGER 408
            + G G      +  P  V  LE   V  V+CG  HS+  V+VD+ + G +
Sbjct: 2917 QQGNG--ATSVNRKPSLVHDLEDARVNRVSCGSSHSIAWVLVDQPSNGNQ 2964



 Score =  111 bits (278), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 132/293 (45%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G+L  CG       GR     D N+  P  +  L    I+ VA      H +A+  +G+ 
Sbjct: 2641 GKLYACGE---GTNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALTQDGKV 2697

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  E G+LGHG+ I  D+P ++  L   +I+    G  H+  +  +G    +G  ++
Sbjct: 2698 FSWGEGEDGKLGHGNCISLDKPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWGLGEY 2757

Query: 140  GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH- 197
            G+LG G    +  P  V+ LV + V   ACG+     ++      + + G   +G+LG  
Sbjct: 2758 GRLGHGDTITQTRPKLVQALVGQRVVQVACGSRDAQTMALTTDGCVYSWGDGDFGKLGRG 2817

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G+D  Y                P A+  L G  +++V CG   ++A+   G V+TWG G 
Sbjct: 2818 GSDGCYT---------------PLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGD 2862

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLGH        P  V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 2863 YFRLGHGNDHHVRKPTLVEGLRGKKIIH----VAVGALHCLAVTDTGQVYAWG 2911



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 144/340 (42%), Gaps = 38/340 (11%)

Query: 80   YTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N++ QLG   G KI+   P     LSK K      G     +V+++G   A G  
Sbjct: 2592 YVWGLNDKDQLGGLKGSKIKL--PIYSEVLSKLKPIHIAGGSKTLFIVSQEGKLYACGEG 2649

Query: 138  KHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +G+LG G   N  EP  +  L   V +  A   G    + L+  +   + + G  + G+
Sbjct: 2650 TNGRLGLGDDNNVCEPKAIPFLSQFVIKKVAVHSGGKHALALT--QDGKVFSWGEGEDGK 2707

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG     +              +P+ I  L  + I  +ACG+ H+ A+ S G +YTWG
Sbjct: 2708 LGHGNCISLD--------------KPKLIEILKSKRIRDIACGSGHSAAIASNGELYTWG 2753

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMW--- 309
             G YGRLGH +   +  P+ V       V+     ++ GS ++   A    G +Y W   
Sbjct: 2754 LGEYGRLGHGDTITQTRPKLVQALVGQRVVQ----VACGSRDAQTMALTTDGCVYSWGDG 2809

Query: 310  --GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYG 365
              GKL   G D  Y P  +  L+G  +  ++ G            + +WG   Y  LG+G
Sbjct: 2810 DFGKLGRGGSDGCYTPLAVDRLNGLGVIQVECGAQFSLALTKYGEVWTWGKGDYFRLGHG 2869

Query: 366  PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                     P  V+ L G  +I VA G  H L + D   V
Sbjct: 2870 --NDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQV 2907



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 115/266 (43%), Gaps = 19/266 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+       I  +A+     H +A+  +G  Y+WG  + G+LGHGD +  D P ++  
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIES 195

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    I     G +++  ++  G    +G   +G+LG G+  + + P+ V  L    V  
Sbjct: 196 LLDKNIVFIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHTVVH 255

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+  +  L       + + G   YG+LG G  +   T              P+ +  
Sbjct: 256 VACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKT--------------PKIVDK 301

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    +VKV CG   + A+ + G VYTWG G   RLGH  ++    P+ ++  +   +  
Sbjct: 302 LLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESLRDKKI-- 359

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK 311
               +S G+ +         +Y WG+
Sbjct: 360 --KDLSVGTTHILALTEDQFVYGWGR 383



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 21/218 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+  +I F+A  C S +  A+   G  YTWGR   G+LGHG+      PT+V+ 
Sbjct: 190 PKLIESLLDKNIVFIA--CGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTT 247

Query: 107 LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           L  + +     G+G S T+ VT  G   ++G   +G+LG G       P  V  L+   V
Sbjct: 248 LKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDINV 307

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG  F+  L++     +   G     +LGHG++              E    P+ I
Sbjct: 308 VKVFCGGQFSAALTA--HGEVYTWGKGDAYRLGHGSE--------------EHVRYPKVI 351

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
            +L  + I  ++ GT H +A+    +VY WG   YG++
Sbjct: 352 ESLRDKKIKDLSVGTTHILALTEDQFVYGWGRNDYGQI 389



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 83/184 (45%), Gaps = 17/184 (9%)

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P  +   + + I  +A   +  H +A+   G VY+WG G  GRLGH +      P+ ++ 
Sbjct: 136 PLRVHGFSDKPITMIASHADGKHYLALTQDGCVYSWGNGDGGRLGHGDTVSYDEPKLIES 195

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
               N++     I+ GS  S+  +  G+LY WG+         N DD + P  +  L G 
Sbjct: 196 LLDKNIV----FIACGSTYSAALSASGELYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGH 251

Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              ++ C    +    V A     SWG   YG+LG G  G   S  PK VD L  ++V+ 
Sbjct: 252 TVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRG--GTDGSKTPKIVDKLLDINVVK 309

Query: 389 VACG 392
           V CG
Sbjct: 310 VFCG 313



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  PT +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2871 DHHVRKPTLVEGLRGKKIIHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGATSVNRK 2928

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P++V +L   ++ +   G SH++
Sbjct: 2929 PSLVHDLEDARVNRVSCGSSHSI 2951



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 49/117 (41%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++++PT +  L G  +  VA G      + V   G  ++WG  + G+LG G       P 
Sbjct: 238 DVLTPTLVTTLKGHTVVHVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGTDGSKTPK 297

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           IV +L    + K   G   +  +T  G    +G     +LG GS  +   P  +  L
Sbjct: 298 IVDKLLDINVVKVFCGGQFSAALTAHGEVYTWGKGDAYRLGHGSEEHVRYPKVIESL 354


>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Xenopus (Silurana) tropicalis]
 gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
          Length = 526

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 134/278 (48%), Gaps = 31/278 (11%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P R+  L G  I  ++ G    H V V  +G  Y+WG N   QLG+G   Q   P 
Sbjct: 60  SILEPRRIDMLSGKRIVSLSYGS-GPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPC 118

Query: 103 IVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV 160
            VS  L   K      G  H++V+T DG   A+G+N  GQ+GSGS  N+  P  V  CL 
Sbjct: 119 QVSTNLINKKAISVACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQ 178

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++ V   ACG   +  ++ V+   +   G    GQLG G+                 QP 
Sbjct: 179 NKTVIGIACGQMSS--MAVVDNGEVYAWGYNGNGQLGLGSSGN--------------QPT 222

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G  + +V CG  HT+A+  +G +Y WG   YG+LG   + ++  P +V    
Sbjct: 223 PCRIAALQGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYPVQV---- 278

Query: 280 RNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
              ++  E ++   + +SS T+      GQ+YMWG+ +
Sbjct: 279 ---IVDKERIVEIAACHSSHTSAAKSQSGQVYMWGQCR 313



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 28/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           GAG +  + +T++      G N  G LG+G  ++ +EP  +  L    + + + G+   V
Sbjct: 28  GAG-NEVLYLTKNDEVFVMGTNSSGCLGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHV 86

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            + + +G  + + G   Y QLG+G+ N             +A    +    L  +  + V
Sbjct: 87  VIVTSDG-EVYSWGHNAYSQLGNGSTN-------------QALSPCQVSTNLINKKAISV 132

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++ +   G VY WG+   G++G     ++ +PR+V    +N  +     I+ G 
Sbjct: 133 ACGSHHSMVLTCDGEVYAWGYNNSGQVGSGSTANQPIPRKVTSCLQNKTVIG---IACGQ 189

Query: 295 VNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD 348
           ++S      G++Y WG   N     G     P P  +  L G  +  +  G  H     D
Sbjct: 190 MSSMAVVDNGEVYAWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVEQVVCGYAHTLALTD 249

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
              + +WG   YG+LG G   + + + P +V + +   V   AC   H+
Sbjct: 250 EGVMYAWGANSYGQLGTG--NKSNQSYPVQVIVDKERIVEIAACHSSHT 296



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 54/190 (28%)

Query: 219 RPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            PR I  L+G+ IV ++ G+  H V V S G VY+WG   Y +LG+        P +V  
Sbjct: 63  EPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAYSQLGNGSTNQALSPCQVST 122

Query: 278 FQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
               N++  +A+ ++ GS +S      G++Y                             
Sbjct: 123 ----NLINKKAISVACGSHHSMVLTCDGEVY----------------------------- 149

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGH 395
                           +WG+   G++G G    +   +P+KV   L+   VI +ACG   
Sbjct: 150 ----------------AWGYNNSGQVGSGSTANQ--PIPRKVTSCLQNKTVIGIACGQMS 191

Query: 396 SLVIVDRTNV 405
           S+ +VD   V
Sbjct: 192 SMAVVDNGEV 201



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P R+  L G+ +  V  G    H +A+  EG  Y WG N  GQLG G+K  +  P
Sbjct: 218 GNQPTPCRIAALQGIRVEQVVCG--YAHTLALTDEGVMYAWGANSYGQLGTGNKSNQSYP 275

Query: 102 TIVSELSKYKIKKAGAGRSHT 122
             V    +  ++ A    SHT
Sbjct: 276 VQVIVDKERIVEIAACHSSHT 296


>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
           sp. JC66]
          Length = 851

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 181/365 (49%), Gaps = 48/365 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N ++P ++  L   DI+ +AAG  + H +A+   G  Y++G    G+LGHG+   +  P 
Sbjct: 67  NQLAPKKIEGLS--DIQAIAAG--TNHSLALTKSGDVYSFGFGLFGRLGHGNTDSQLEPK 122

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            +  LS   I+   AG  H++ +T+ G+  +FG    G LG G+  ++  P  +  L S+
Sbjct: 123 KIEGLS--DIQAIAAGDFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQSTPKKIESL-SD 178

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V A A G + ++ L+  +   + + G   +G+LGHG                ++Q  P+ 
Sbjct: 179 VQAIAAGGNHSLALT--KSGDVYSFGFGLFGRLGHGD--------------TDSQLEPKK 222

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           I  L+   I  +A G NH++A+   G VY++G+G +G+LGH + +++  P++++      
Sbjct: 223 IEDLSD--IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLGHGDTENQLTPKKIEDLSDIQ 280

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRC 335
                  ++AG+ +S      G++Y +G+  N G       DD + PK +  L   +++ 
Sbjct: 281 ------AVAAGANHSLALTKSGEVYSFGR-GNTGQLGHGDTDDQLTPKKIEGLK--DIQA 331

Query: 336 MDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           + +G+ H      S  + S+G+   G LG+G    +    PKK++ L  +  I  A G  
Sbjct: 332 IAAGDFHSLALTKSGDVYSFGNGTSG-LGHGDTANQLE--PKKIEGLTDIQAI--AAGAN 386

Query: 395 HSLVI 399
           HSL +
Sbjct: 387 HSLAL 391



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 168/334 (50%), Gaps = 41/334 (12%)

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            +++G    G+LGHGD   +  P  +  LS   I+   AG +H++ +T+ G+  +FG+  
Sbjct: 49  VFSFGMGMYGKLGHGDTANQLAPKKIEGLSD--IQAIAAGTNHSLALTKSGDVYSFGFGL 106

Query: 139 HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G+  +++EP  +  L S++ A A G DF   L+  +   + + G    G LGHG
Sbjct: 107 FGRLGHGNTDSQLEPKKIEGL-SDIQAIAAG-DFH-SLALTKSGDVYSFGNGTSG-LGHG 162

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                NT+D         Q  P+ I +L+   +  +A G NH++A+   G VY++GFG +
Sbjct: 163 -----NTED---------QSTPKKIESLSD--VQAIAAGGNHSLALTKSGDVYSFGFGLF 206

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLK 313
           GRLGH +   +  P++++             I+AG  +S      G +Y +     G+L 
Sbjct: 207 GRLGHGDTDSQLEPKKIEDLSDIQ------AIAAGGNHSLALTKSGDVYSFGWGLHGQLG 260

Query: 314 N-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS 371
           + + ++ + PK + DLS  +++ + +G  H      S  + S+G    G+LG+G    + 
Sbjct: 261 HGDTENQLTPKKIEDLS--DIQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQL 318

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +  PKK++ L+ +  I  A G  HSL +    +V
Sbjct: 319 T--PKKIEGLKDIQAI--AAGDFHSLALTKSGDV 348



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 134/271 (49%), Gaps = 31/271 (11%)

Query: 42  GNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           GN  S    + + G+ DI+ +AAG    H +A+   G  Y++G    G LGHG+   +  
Sbjct: 113 GNTDSQLEPKKIEGLSDIQAIAAG--DFHSLALTKSGDVYSFGNGTSG-LGHGNTEDQST 169

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P  +  LS   ++   AG +H++ +T+ G+  +FG+   G+LG G   +++EP  +  L 
Sbjct: 170 PKKIESLSD--VQAIAAGGNHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDL- 226

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           S++ A A G + ++ L+  +   + + G   +GQLGHG                E Q  P
Sbjct: 227 SDIQAIAAGGNHSLALT--KSGDVYSFGWGLHGQLGHGD--------------TENQLTP 270

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + I  L+   I  VA G NH++A+   G VY++G G  G+LGH +  D+  P++++  + 
Sbjct: 271 KKIEDLSD--IQAVAAGANHSLALTKSGEVYSFGRGNTGQLGHGDTDDQLTPKKIEGLKD 328

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
                    I+AG  +S      G +Y +G 
Sbjct: 329 IQ------AIAAGDFHSLALTKSGDVYSFGN 353



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 109/229 (47%), Gaps = 34/229 (14%)

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           S+ + G+  YG+LGHG        D++ +LA      P+ I  L+   I  +A GTNH++
Sbjct: 48  SVFSFGMGMYGKLGHG--------DTANQLA------PKKIEGLSD--IQAIAAGTNHSL 91

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+   G VY++GFG +GRLGH     +  P++++             I+AG  +S     
Sbjct: 92  ALTKSGDVYSFGFGLFGRLGHGNTDSQLEPKKIEGLSDIQ------AIAAGDFHSLALTK 145

Query: 303 GGQLYMWGKLKN-----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G +Y +G   +     N +D   PK +  LS  +++ + +G  H      S  + S+G 
Sbjct: 146 SGDVYSFGNGTSGLGHGNTEDQSTPKKIESLS--DVQAIAAGGNHSLALTKSGDVYSFGF 203

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +G LG+G     S   PKK++ L  +  I  A G  HSL +    +V
Sbjct: 204 GLFGRLGHG--DTDSQLEPKKIEDLSDIQAI--AAGGNHSLALTKSGDV 248


>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
 gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
          Length = 1052

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 152/331 (45%), Gaps = 30/331 (9%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T +G   A G N
Sbjct: 4   YCWGDASHGQLGLGGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVYACGNN 63

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            H QLG         P P       V   ACG+  ++ L+  E   IL+ G    GQ+GH
Sbjct: 64  DHHQLGHELPTKRPLPIP-ELQAYVVIQIACGSRHSMALT--EWGQILSWGDNDCGQVGH 120

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            TDN+       ++L       P+ +  L   T+V++ACG NH++A+ S G +Y+WG   
Sbjct: 121 STDNDV------IEL-------PKILRFLVSRTVVQIACGNNHSLALTSCGELYSWGSNI 167

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG +  KD  +P      +   +L  P A I+ G  +S   +    ++ WGK     
Sbjct: 168 YGQLGVQSPKD--LPHSNAPLRLTTILGIPLATIACGGNHSFLISKSSAVFGWGKNTCGQ 225

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+  +  YP  L  +    +R +  G+ +  F+  +    + G   YG+LG+G    
Sbjct: 226 LGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGV--S 283

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 284 NNEMIPRMVIELMGSTITQVACGNRHTLALV 314



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 27/236 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
           P  LR LV   +  V   C + H +A+   G  Y+WG N  GQLG     D    + P  
Sbjct: 130 PKILRFLVSRTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVQSPKDLPHSNAPLR 187

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS 161
           ++ +    +     G +H+ ++++  +S  FGW K+  GQLG    +N   PS ++ + +
Sbjct: 188 LTTILGIPLATIACGGNHSFLISK--SSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRT 245

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V    CG +++V+L++  G     AG   YGQLGHG  N               +  P
Sbjct: 246 LGVRFVTCGDEYSVFLTNEGGVFTCGAG--NYGQLGHGVSNN--------------EMIP 289

Query: 221 RAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           R +  L G TI +VACG  HT+A V S G VY++G G  G+LG R    + +P+ V
Sbjct: 290 RMVIELMGSTITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVV 345



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 82/325 (25%), Positives = 143/325 (44%), Gaps = 31/325 (9%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            C   H + +   G+ Y  G N+  QLGH  ++   RP  + EL  Y + +   G  H++
Sbjct: 42  ACGHRHTLFLTANGQVYACGNNDHHQLGH--ELPTKRPLPIPELQAYVVIQIACGSRHSM 99

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEG 181
            +TE G  L++G N  GQ+G  +  + IE P  +R LVS  V   ACG + ++ L+S   
Sbjct: 100 ALTEWGQILSWGDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSC-- 157

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             + + G   YGQLG  +  +    ++           P  +  + G  +  +ACG NH+
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNA-----------PLRLTTILGIPLATIACGGNHS 206

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
             +     V+ WG    G+LG  ++++   P ++   +   V      ++ G   S    
Sbjct: 207 FLISKSSAVFGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGV----RFVTCGDEYSVFLT 262

Query: 302 GGGQLYM-----WGKLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCIS 353
             G ++      +G+L +   ++ M P+ +++L G  +  +  GN H      S     S
Sbjct: 263 NEGGVFTCGAGNYGQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVPSGGRVYS 322

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKV 378
           +G    G+L  G     S  +PK V
Sbjct: 323 FGLGASGQL--GTRNTISQTLPKVV 345



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 82/178 (46%), Gaps = 4/178 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G +      +  +P RL  ++G+ +  +A G    H   +      
Sbjct: 158 GELYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGIPLATIACG--GNHSFLISKSSAV 215

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG+N  GQLG  D+  R  P+ +  +    ++    G  ++V +T +G     G   +
Sbjct: 216 FGWGKNTCGQLGLNDEQNRAYPSQLKSMRTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNY 275

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           GQLG G   NE+ P  V  L+ S +T  ACG   T+ L    G  + + GL   GQLG
Sbjct: 276 GQLGHGVSNNEMIPRMVIELMGSTITQVACGNRHTLALVP-SGGRVYSFGLGASGQLG 332


>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
           florea]
          Length = 1081

 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 107/400 (26%), Positives = 165/400 (41%), Gaps = 75/400 (18%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAA 63
           L +E ++  E    K  ++   GST    +G   G  D N++ P  L      +I+ +A 
Sbjct: 10  LASEPVIAVEYPLHKKKDMFCWGSTIHGELGL-GGIEDENILIPRELDFKKAAEIQQIAC 68

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           G    + V +   G  Y+ G N+ GQLGH     R R  ++  L  +  KKA  G  HT+
Sbjct: 69  G--ENYTVVITQIGEIYSCGNNDYGQLGHEKG--RKRLQLIPGLDAFVFKKAACGAYHTL 124

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCL-VSEVTATACGADFTVWLSSVE 180
            + E G   ++G N  GQLG  S +N +E SP  V+ L  S V   ACG      L++  
Sbjct: 125 AINEWGQLFSWGSNTEGQLGLNS-KNFMESSPRMVKTLGTSVVVQIACGMKHAFALTN-- 181

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              + + G    GQLG GTD +Y  K             P+ I+A  G  I  +ACG  H
Sbjct: 182 NGELYSWGSNSEGQLGLGTDIKYEIK-------------PKFISAFIGIPIAFIACGGYH 228

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           ++A+   G V+ WG   +G+LG  + +D  +P ++   Q   +               C 
Sbjct: 229 SIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI---------------CY 273

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           A  G+                                      F+  D    + G   YG
Sbjct: 274 AACGE----------------------------------EFSVFLTVDGGVFTCGAGMYG 299

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +LG+G     +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 300 QLGHG--SNSNEILPRQVMELMGSTVTQISCGKRHTLALV 337



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/233 (30%), Positives = 114/233 (48%), Gaps = 20/233 (8%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIV 104
           S  R+   +G  +  V   C   H  A+   G  Y+WG N  GQLG G  I+ + +P  +
Sbjct: 153 SSPRMVKTLGTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKYEIKPKFI 211

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
           S      I     G  H++ +++ G    +G N  GQLG    ++   P  ++ L  +++
Sbjct: 212 SAFIGIPIAFIACGGYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQLQTLQNAKI 271

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG +F+V+L+   G     AG+  YGQLGHG+++               +  PR +
Sbjct: 272 CYAACGEEFSVFLTVDGGVFTCGAGM--YGQLGHGSNSN--------------EILPRQV 315

Query: 224 AALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             L G T+ +++CG  HT+A V S+G VY WG GG G+LG+   +    P+ V
Sbjct: 316 MELMGSTVTQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVV 368



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 76/162 (46%), Gaps = 4/162 (2%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +   +G+ I F+A G    H +A+   G  + WG+N  GQLG  D   R+ P  +
Sbjct: 206 IKPKFISAFIGIPIAFIACG--GYHSIAISKSGAVFGWGKNTFGQLGLNDTQDRNLPCQL 263

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
             L   KI  A  G   +V +T DG     G   +GQLG GS  NEI P  V  L+ S V
Sbjct: 264 QTLQNAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTV 323

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           T  +CG   T+ L    G  +   GL   GQLG+ +     T
Sbjct: 324 TQISCGKRHTLALVPSRG-RVYAWGLGGAGQLGNHSTRSVTT 364


>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1457

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 177/425 (41%), Gaps = 83/425 (19%)

Query: 29  CWDAVGRRKGALDGNLVSPTRLRPL---VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
            W   G   G L G      RL P       DI  V +G    H +A+D  G  + WG N
Sbjct: 70  VWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSG--EAHSLALDEAGTVWAWGGN 127

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
             GQLG G    R  P  V+ L+   +    AG  H++ +  DG   A+G N HGQLG G
Sbjct: 128 SSGQLGDGTTTDRVTPMQVAGLTD--VVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRG 185

Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
                + P PV  L   V A A G DFT  L+ ++  ++   G    GQLG GT  +   
Sbjct: 186 HTEPGLTPEPVPGL-EGVVALAAGFDFT--LAVMDDGTVRAWGANSSGQLGDGTFTQ--- 239

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                +LA      P  +A ++G  I  V  GT H VA+   G V+TWG    G+LG   
Sbjct: 240 -----RLA------PVEVAHISG--ISAVTAGTYHAVALGKDGGVWTWGANSSGQLGDGA 286

Query: 266 QKDEWVPRRVDVFQRNNVLPPE-----AVISAGSVNSSCTAGGGQLYMWGK--------- 311
             D  VP RV   +R   +        A++ AGSV +    G GQL   G          
Sbjct: 287 WSDRAVPARVPGLERVKAVASMDASSLALLEAGSVLAWGANGSGQLGDSGTDDRATPGEV 346

Query: 312 ------------------LKNNGDDWMY------------------PKPLMDLSGWNLRC 335
                             L+ +G  W +                  P PL+ L+  ++  
Sbjct: 347 PGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLA--DVAS 404

Query: 336 MDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           M +G+ H      D +  SWG   YG+LG G   ++ +A+  +V+ L G+  ++ A G+ 
Sbjct: 405 MAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAV--RVEGLSGIRGVA-ASGH- 460

Query: 395 HSLVI 399
           HSL +
Sbjct: 461 HSLAV 465



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 161/388 (41%), Gaps = 81/388 (20%)

Query: 57   DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYK--IK 113
            D+  VAAG      VAV V G  + WG NE GQLG G    R  P  V  E SK +  ++
Sbjct: 1052 DVEAVAAG--EQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRIEASKLRQPVR 1109

Query: 114  KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
               A   H V +  DG   A+G N HGQLG G+      P  VR L + V A + GA  +
Sbjct: 1110 TVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGL-TGVVAVSTGAWHS 1168

Query: 174  VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            + L S    ++   G   +GQLG GT     T              P  +A L  + +V 
Sbjct: 1169 LALRS--DGTVWAWGANGFGQLGDGTTLSRTT--------------PVRVAGL--QKVVA 1210

Query: 234  VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD----------------- 276
            +  G  H +AV S G V+ WG+  +G+LG    +   +P RV+                 
Sbjct: 1211 IGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGLSNVTSVAGGDHHSLA 1270

Query: 277  -------------------------VFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMW 309
                                      + R  V   + V+   AG+ ++    G G ++ W
Sbjct: 1271 LLADGSLGAWGNNAAGQLGDGTGTTRYSRVWVKGVDGVVEVRAGAAHTLALRGDGTVWTW 1330

Query: 310  GKLKNN----GDD----WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
            G   ++    GDD     + P+P+  LSG  +  + +G  H F VG   +  +WG   +G
Sbjct: 1331 GDNTHSQLGAGDDSTRTRIVPRPVPGLSG--VTAIGAGARHSFAVGPKGTVWAWGRNSHG 1388

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVIS 388
            +LG G    +  A P +V  L  + V+S
Sbjct: 1389 QLGLGDNANR--AEPLRVKELAEVSVVS 1414



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 102/342 (29%), Positives = 154/342 (45%), Gaps = 40/342 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P  +R L GV    VA    + H +A+  +G  + WG N  GQLG G  + R  P  V+
Sbjct: 1148 APVVVRGLTGV----VAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTTLSRTTPVRVA 1203

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             L K  +   GAG  H + V  DG+  A+G+N  GQLG G+  + + P  V  L S VT+
Sbjct: 1204 GLQK--VVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAESRLLPVRVEGL-SNVTS 1260

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             A G   +  L+ +   S+   G    GQLG GT     T+ S V +             
Sbjct: 1261 VAGGDHHS--LALLADGSLGAWGNNAAGQLGDGTG---TTRYSRVWVKGV---------- 1305

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNV 283
               + +V+V  G  HT+A+   G V+TWG   + +LG  +   +   VPR V        
Sbjct: 1306 ---DGVVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTRTRIVPRPVP------G 1356

Query: 284  LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLRCMDSG 339
            L     I AG+ +S      G ++ WG+  +     GD+    +PL       +  +  G
Sbjct: 1357 LSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVSVVSGG 1416

Query: 340  -NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
             +    +  D +  SWG + +G LG G  GQ+SS  P +V +
Sbjct: 1417 ADFSLAMQRDGTVSSWGSSLHGALGLGTAGQRSS--PGQVAL 1456



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 150/345 (43%), Gaps = 54/345 (15%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  + WG    GQLGHG   +   P  +  L+   +    AG  H++    D
Sbjct: 361 HALALRGDGTLWAWGGGLAGQLGHGGSERHVVPAPLLRLAD--VASMAAGSFHSLAALGD 418

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTAT-----ACGADFTVWLSSVEG 181
           G   ++G N +GQLG G+         V  L  +  V A+     A GAD TVW      
Sbjct: 419 GTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIRGVAASGHHSLAVGADGTVWAWGRNA 478

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
           A          GQLG G+     T+D         + RP A++ L   ++V VA G +HT
Sbjct: 479 A----------GQLGDGS-----TRD---------RARPVAVSGL--TSVVAVATGGSHT 512

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+   G V+ WG+   G+LG     D   P RV        L     ++AG+  S    
Sbjct: 513 MALRGDGTVWAWGYNALGQLGDGTTVDRLTPVRV------ARLDSVVAVAAGTYFSMALR 566

Query: 302 GGGQLYMWGK------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
           G G ++ WG+          G   ++P  +  L+  N+  + +G+ H   V  D +  +W
Sbjct: 567 GDGTVWTWGEGFEGQVGDGGGVQRLFPVQVAGLT--NVTRVAAGSAHALAVRGDGTVWAW 624

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G    G+LG G +  +    P +V  L G  + +V+ G  HS+ +
Sbjct: 625 GDNGEGQLGDGTWSDRF--RPVQVPGLTG--ITAVSGGRSHSMAL 665



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 155/382 (40%), Gaps = 54/382 (14%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
            ++  VAAG  S H +AV  +G  + WG N  GQLG G    R RP  V  L+   I   
Sbjct: 600 TNVTRVAAG--SAHALAVRGDGTVWAWGDNGEGQLGDGTWSDRFRPVQVPGLTG--ITAV 655

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-------SEVTATAC 168
             GRSH++ +  DG+  A+G+N +GQLG G+  + + P+ V  L        S +   A 
Sbjct: 656 SGGRSHSMALHGDGSVRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHPSHLHVLAL 715

Query: 169 GADFTV--WLSSVEGASILNA-----------GLPQYGQLGHGTDNEYNTKDSSVKLAY- 214
            AD T+  W  +  G   L A           GL +  +L  G  +    +     LA+ 
Sbjct: 716 HADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVDRLAVGRAHTLMVRPDGAVLAWG 775

Query: 215 ---EAQPRPRAIAALAGETIVK-------VACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
                Q         AG  +V+       VA G  H++A+   G V+ WG  G G+LG  
Sbjct: 776 ENASGQLGDGTTTHRAGPVLVRGVPCVRSVASGVLHSLALACDGSVWAWGANGRGQLGDG 835

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----D 318
                 +P RVD  Q    +      S   +        G  + WG   +   GD    D
Sbjct: 836 TTASRVIPARVDGLQGAVAVAAGGDASLALLAD------GTAWAWGANAHGQLGDGSTSD 889

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P  L   S  N+  +  G  H    G D +  +WG    G+LG G      S  P +
Sbjct: 890 RAVPGQLKLPS--NIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGS--TTPSPTPVR 945

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           V  LEG  V SV+ G   SL +
Sbjct: 946 VKGLEG--VASVSAGRAFSLAV 965



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 149/348 (42%), Gaps = 32/348 (9%)

Query: 57   DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            +I  VA G    H +A   +G  + WG N  GQLG G       P  V  L    +    
Sbjct: 901  NIMSVALG--ETHGLAAGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLEG--VASVS 956

Query: 117  AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
            AGR+ ++ V +DG + A+G N  GQLG G+  ++  P  V   V  V A + GA   V L
Sbjct: 957  AGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVTS-VKRVRAMSAGAHHVVAL 1015

Query: 177  SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
               E  ++   G    GQLG GT        S+    +     PR +  L    +  VA 
Sbjct: 1016 G--EDGAVWTWGDNTLGQLGDGT--------SAPTWMW-----PRQVPEL--RDVEAVAA 1058

Query: 237  GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
            G   +VAV   G  + WG   YG+LG  +      P +V + + + +  P   + A + +
Sbjct: 1059 GEQFSVAVLVGGGAHAWGSNEYGQLGDGKTGPRLTPVQVRI-EASKLRQPVRTVRAWAQH 1117

Query: 297  SSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
            +      G +  WG   +    +G       P++      +  + +G  H   + +D + 
Sbjct: 1118 AVALMADGTVQAWGDNAHGQLGDGTTERRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTV 1177

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +WG   +G+LG G    +++  P +V  L+   V+++  G  H+L +
Sbjct: 1178 WAWGANGFGQLGDGTTLSRTT--PVRVAGLQ--KVVAIGAGGYHALAV 1221



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 125/299 (41%), Gaps = 43/299 (14%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQL-GSGSIRNEIEPSPV---RCLVSEVTATACGADF 172
           AG  H++ V+  G   A+G N  GQL G  +    + P+P+   R +VS V+  A     
Sbjct: 56  AGSQHSLYVSPTGAVWAWGGNTSGQLGGEATPLQRLAPAPLPSPRDIVSVVSGEAHS--- 112

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
              L+  E  ++   G    GQLG GT  +  T              P  +A L    +V
Sbjct: 113 ---LALDEAGTVWAWGGNSSGQLGDGTTTDRVT--------------PMQVAGL--TDVV 153

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----- 287
            VA G  H++A+   G V+ WG   +G+LG    +    P  V   +    L        
Sbjct: 154 AVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDFTL 213

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
           AV+  G+V +      GQL   G         + P  +  +SG  +  + +G  H   +G
Sbjct: 214 AVMDDGTVRAWGANSSGQLGD-GTFTQR----LAPVEVAHISG--ISAVTAGTYHAVALG 266

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            D    +WG    G+LG G +  +  A+P +V  LE   V +VA     SL +++  +V
Sbjct: 267 KDGGVWTWGANSSGQLGDGAWSDR--AVPARVPGLE--RVKAVASMDASSLALLEAGSV 321



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 29/208 (13%)

Query: 211 KLAYEAQPRP-RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           +LA   QPR  R          +++A G+ H++ V   G V+ WG    G+LG      E
Sbjct: 30  ELAALEQPRAARTQRITVTAPPMRIAAGSQHSLYVSPTGAVWAWGGNTSGQLG-----GE 84

Query: 270 WVPRRVDVFQRNNVLP---PEAVIS--AGSVNSSCTAGGGQLYMWGKLKNN--GD----D 318
             P      QR    P   P  ++S  +G  +S      G ++ WG   +   GD    D
Sbjct: 85  ATP-----LQRLAPAPLPSPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTD 139

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            + P  +  L+  ++  + +G+ H   +  D +  +WG   +G+LG G    +    P+ 
Sbjct: 140 RVTPMQVAGLT--DVVAVAAGDFHSLALRGDGTVWAWGTNFHGQLGRGH--TEPGLTPEP 195

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNV 405
           V  LEG  V+++A G+  +L ++D   V
Sbjct: 196 VPGLEG--VVALAAGFDFTLAVMDDGTV 221


>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
          Length = 527

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +   L  P RL  L    I  ++ G    H +    EG  +
Sbjct: 42  EIFVLGTNCSGCLGL--GDVQSTL-EPRRLDSLSDKKIACLSYGS-GPHIILATTEGEVF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  VS  LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 98  TWGHNGYTQLGNGTTNHGLVPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNS 157

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG   +V  + V+   +   G    GQLG 
Sbjct: 158 GQVGSGSTANQAIPRRVTGCLQNKVVVNIACGQMCSV--AVVDTGEVYVWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+                 QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 216 GSSGN--------------QPTPCRVAALQGIRVQRVACGFAHTLVLTDEGQVYAWGANS 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNQSYPTPV-VVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 314



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 32/307 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G   +  +  T +      G N  G LG G +++ +EP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGNAGNEVLYTTINDEIFVLGTNCSGCLGLGDVQSTLEPRRLDS 70

Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L  + +   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LSDKKIACLSYGSGPHIILATTEG-EVFTWGHNGYTQLGNGTTNH-------------GL 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L+ + +++VACG+ H++ + S G VY WG+   G++G     ++ +PRRV  
Sbjct: 117 VPCQVSTNLSNKQVIEVACGSYHSLVLTSDGEVYAWGYNNSGQVGSGSTANQAIPRRVTG 176

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGW 331
             +N V+     I+ G + S      G++Y+WG   N     G     P P  +  L G 
Sbjct: 177 CLQNKVV---VNIACGQMCSVAVVDTGEVYVWGYNGNGQLGLGSSGNQPTPCRVAALQGI 233

Query: 332 NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV- 389
            ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I + 
Sbjct: 234 RVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEIA 290

Query: 390 ACGYGHS 396
           AC   H+
Sbjct: 291 ACHSTHT 297


>gi|195490361|ref|XP_002093107.1| GE21143 [Drosophila yakuba]
 gi|194179208|gb|EDW92819.1| GE21143 [Drosophila yakuba]
          Length = 1057

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 156/338 (46%), Gaps = 44/338 (13%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T +G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTANGKVYACGSN 67

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
            H QLG     +E+ P+    L+ E     V   +CG+  ++ LS  E   +L+ G    
Sbjct: 68  DHSQLG-----HEL-PTKRPLLIPELQDYVVIQISCGSRHSLALS--EWGQVLSWGDNDC 119

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLGH TD E       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKEI------VQL-------PKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166

Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           WG   YG+LG    KD      P R+       +  P A I+ G  +S   +  G ++ W
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
           G+        N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+L
Sbjct: 223 GRNNCGQLGLNDEANRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+G     +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 26/249 (10%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           G+   A D  +V  P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG 
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 93  G---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
               D    + P  ++ L    +     G +H+ ++++ G    +G N  GQLG     N
Sbjct: 178 NSPKDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDEAN 237

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKD 207
              P+ ++ L +  V   ACG +F+V+L++  G     AG   YGQLGHG + NE     
Sbjct: 238 RAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---- 291

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQ 266
                       PR +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  
Sbjct: 292 -----------LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 267 KDEWVPRRV 275
           K   +P+ V
Sbjct: 341 KSLMLPQVV 349



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 168/371 (45%), Gaps = 35/371 (9%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            G+ L+C GST    +G   G  D  +++P+++       ++ VA G    H + +   G
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTANG 59

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + Y  G N+  QLGH  ++   RP ++ EL  Y + +   G  H++ ++E G  L++G N
Sbjct: 60  KVYACGSNDHSQLGH--ELPTKRPLLIPELQDYVVIQISCGSRHSLALSEWGQVLSWGDN 117

Query: 138 KHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             GQLG  + +  ++ P  VR LVS+ V   ACG + ++ L+S     + + G   YGQL
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQL 175

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G       N+        Y     P  +  L G  +  +ACG NH+  +   G V+ WG 
Sbjct: 176 G------VNSPKDLTHCNY-----PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WG 310
              G+LG  ++ +   P ++   +   V      ++ G   S      G ++      +G
Sbjct: 225 NNCGQLGLNDEANRAYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 311 KLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPY 367
           +L +    + M P+ +M+L G  +  +  GN H    V +     ++G    G+L  G  
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GTR 338

Query: 368 GQKSSAMPKKV 378
             KS  +P+ V
Sbjct: 339 STKSLMLPQVV 349


>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
          Length = 621

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 140/296 (47%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  I   + G    H +    EG  +
Sbjct: 136 EIFVLGTNCCGCLGL--GDIQST-IEPRRLDSLSGKKIACFSYGS-GPHVILATTEGEIF 191

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 192 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 251

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG   +V  + V+   +   G    GQLG 
Sbjct: 252 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSV--AVVDNGEVYVWGYNGNGQLGL 309

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G+    +T              P  IAAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 310 GSSGNQST--------------PCRIAALQGICVQRVACGYAHTLVLTDEGQVYVWGANS 355

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  V V +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 356 YGQLGTGNKSNQSYPTPVAV-EKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 408



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 70/309 (22%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G I++ IEP  +  
Sbjct: 105 SLCSEEELQLIRQACVFGSAGNEVLYSTVNDEIFVLGTNCCGCLGLGDIQSTIEPRRLDS 164

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   V L++ EG  I   G   Y QLG+GT N                
Sbjct: 165 LSGKKIACFSYGSGPHVILATTEG-EIFTWGHNAYSQLGNGTTNHGLV------------ 211

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 212 --PCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 269

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
              +N V+     I+ G + S      G++Y+W                    G+N    
Sbjct: 270 GCLQNKVV---VNIACGQMCSVAVVDNGEVYVW--------------------GYN---- 302

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             GN                   G+LG G  G +S+  P ++  L+G+ V  VACGY H+
Sbjct: 303 --GN-------------------GQLGLGSSGNQST--PCRIAALQGICVQRVACGYAHT 339

Query: 397 LVIVDRTNV 405
           LV+ D   V
Sbjct: 340 LVLTDEGQV 348


>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
 gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
           aurantiaca DW4/3-1]
          Length = 732

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 166/380 (43%), Gaps = 42/380 (11%)

Query: 28  TCWDAVGRRKGALDGNLVSPTRL-RPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
           T W A     G L     S  R+   +VG+ D   VAAG  S H +A+  +G  + WG N
Sbjct: 52  TVWAAGSNTSGQLGDGTTSERRVPAQVVGLSDAVLVAAG--SSHSLAIRSDGTAWAWGHN 109

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
             G+LG G   +R RP  V+ LS+ +   AG G  H++VV  DG   A+GWN  GQLG G
Sbjct: 110 GSGELGDGTTFRRTRPVQVTGLSEAEAVAAGDG--HSLVVRSDGTVWAWGWNSDGQLGDG 167

Query: 146 SIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           + R    P  V  L   V  A   G    V L      ++   G    GQLG GT  +  
Sbjct: 168 TTRERHVPVQVAGLSGGVKVAAGDGHSLAVCLD----GTVWAWGRNDSGQLGDGTTVQ-- 221

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
                       +  P  +A L+G  +V VA G++H++AV S G V+ WG    G+LG  
Sbjct: 222 ------------RSAPVQVAGLSG--VVAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDG 267

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYP 322
                  P +V        L     ++AG  +S      G ++ WG+      GD  M  
Sbjct: 268 TTSARLTPVQV------TGLSGGVAVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTA 321

Query: 323 K--PLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
              P+  +       + +G  H  V  +D +  +WG+   G+ G G    K+S  P +V 
Sbjct: 322 SLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNIEGQRGDGS--AKTSTAPVQVT 379

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L G    +VA G  H+L +
Sbjct: 380 ALSGG--FTVAAGKAHALAV 397



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 164/378 (43%), Gaps = 65/378 (17%)

Query: 41  DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           DG  V   +P ++  L GV    VA    S H +AV  +G  + WGRN  GQLG G    
Sbjct: 216 DGTTVQRSAPVQVAGLSGV----VAVAAGSSHSLAVRSDGTVWAWGRNSDGQLGDGTTSA 271

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V+ LS        AG  H++ V  DG   A+G N  GQLG GS+   +  +PV+
Sbjct: 272 RLTPVQVTGLSGGV--AVAAGMFHSLAVRSDGTVWAWGQNTRGQLGDGSMTASL--TPVQ 327

Query: 158 CL-VSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + +SE  A A G        +D TVW                      G + E    D 
Sbjct: 328 AIGLSEGEAVAAGETHSLVARSDGTVWA--------------------WGNNIEGQRGDG 367

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
           S K +      P  + AL+G     VA G  H +AV S G V+ WG   +G+LG   +  
Sbjct: 368 SAKTSTA----PVQVTALSGG--FTVAAGKAHALAVRSDGTVWAWGQNLFGQLGDGTRMQ 421

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP 324
              P +V        L     ++AG  +S      G ++ WG+  +    +G     P P
Sbjct: 422 RTAPVQV------TGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTTAQRPAP 475

Query: 325 LM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           +   +LSG  +  + +G  H   V +D +  +WG    G+LG G    ++   P +V  L
Sbjct: 476 VQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGT--TRARLTPVQVAGL 531

Query: 382 EGMHVISVACGYGHSLVI 399
            G  V++VA GY HSL +
Sbjct: 532 SG--VVAVAAGYFHSLAV 547



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 121/283 (42%), Gaps = 47/283 (16%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSC----HCVAVDVEGRCYTWGRNERGQLGHGDK 95
           L G L   TR++    V +  ++ G        H + + ++G  + WG+N  GQLG G  
Sbjct: 410 LFGQLGDGTRMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTT 469

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
            QR  P  V+ELS   +    AG SH++ V+ DG   A+G N  GQLG G+ R  + P  
Sbjct: 470 AQRPAPVQVTELSG--VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRARLTPVQ 527

Query: 156 VRCLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           V  L S V A A G        +D TVW            G   + QLG GT+ +     
Sbjct: 528 VAGL-SGVVAVAAGYFHSLAVRSDGTVWA----------WGNNSFFQLGDGTNTQ----- 571

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
                    +P P  +  L+G   V  A G  H++ + S G V+ WG   YG+LG+    
Sbjct: 572 ---------RPTPVRVPGLSGG--VAAAAGYFHSLVLRSDGTVWGWGNNAYGQLGNGTAN 620

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             + P +V        L     ++AG   S      G +  WG
Sbjct: 621 ASFSPVQV------TGLSGGVAVAAGDFQSLAVRSDGTVRAWG 657


>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
          Length = 306

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 129/263 (49%), Gaps = 26/263 (9%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GE+   G   +  +G+   ++  N+ +P  +  L G  ++ VA  C   H  A+   G+ 
Sbjct: 58  GEVFTFGRGNFGQLGQ-GASVTANVSTPALVSALQGKHVKQVA--CGWHHTCALIDNGQL 114

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           YTWG  E G+LGHGD++++  P +V  L   ++    AG  H+ V+ E GN L +G    
Sbjct: 115 YTWGSGEYGRLGHGDEVRQASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWGGGYF 174

Query: 140 GQLGSGSIRNEIEPSPVR----CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQLG G   +   P  V+    C+  EV   ACG   T+ L+  +   +   G  ++G+L
Sbjct: 175 GQLGHGDETDRKTPKMVKGVQQCIAHEV---ACGTHHTLMLTQSQ--EVWTWGSGEFGKL 229

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G +              E    P  I AL G  ++ ++ G  H+ A+ S+G +YTWG 
Sbjct: 230 GIGDE--------------EKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGG 275

Query: 256 GGYGRLGHREQKDEWVPRRVDVF 278
           G  G+LGH ++  + +P  V+V 
Sbjct: 276 GDKGQLGHGDENSQNIPVVVEVI 298



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 147/314 (46%), Gaps = 32/314 (10%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+   GQLGHGD+  + +P +V     + +++   G  HT ++ E+G    FG  
Sbjct: 7   EVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAILMENGEVFTFGRG 66

Query: 138 KHGQLGSGS--IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             GQLG G+    N   P+ V  L  + V   ACG   T  L  ++   +   G  +YG+
Sbjct: 67  NFGQLGQGASVTANVSTPALVSALQGKHVKQVACGWHHTCAL--IDNGQLYTWGSGEYGR 124

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGHG +                Q  P+ + +L G+ +  VA G  H+  +   G + TWG
Sbjct: 125 LGHGDEVR--------------QASPKLVESLQGKEVTFVAAGGFHSSVIIEGGNLLTWG 170

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
            G +G+LGH ++ D   P+ V   Q+   +  E  ++ G+ ++       +++ WG  + 
Sbjct: 171 GGYFGQLGHGDETDRKTPKMVKGVQQ--CIAHE--VACGTHHTLMLTQSQEVWTWGSGEF 226

Query: 315 N----GDDWMYPKPLM--DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPY 367
                GD+  + +P+M   L G  +  + +G  H   + ++    +WG    G+LG+G  
Sbjct: 227 GKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAALTSEGVLYTWGGGDKGQLGHGD- 285

Query: 368 GQKSSAMPKKVDIL 381
            + S  +P  V+++
Sbjct: 286 -ENSQNIPVVVEVI 298



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 123/267 (46%), Gaps = 25/267 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIV 104
           P  +   +G ++R V+  C + H   +   G  +T+GR   GQLG G  +  +   P +V
Sbjct: 30  PRLVVAFLGFNVRQVS--CGNQHTAILMENGEVFTFGRGNFGQLGQGASVTANVSTPALV 87

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
           S L    +K+   G  HT  + ++G    +G  ++G+LG G    +  P  V  L   EV
Sbjct: 88  SALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEYGRLGHGDEVRQASPKLVESLQGKEV 147

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           T  A G   +  +  +EG ++L  G   +GQLGHG + +  T              P+ +
Sbjct: 148 TFVAAGGFHSSVI--IEGGNLLTWGGGYFGQLGHGDETDRKT--------------PKMV 191

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             +      +VACGT+HT+ +     V+TWG G +G+LG  +++    P  +   Q   V
Sbjct: 192 KGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGV 251

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWG 310
           +     IS G  +S+     G LY WG
Sbjct: 252 IH----ISTGGFHSAALTSEGVLYTWG 274



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 121/271 (44%), Gaps = 28/271 (10%)

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG G  + + +P  V   +   V   +CG   T  L  +E   +   G   +GQLG G
Sbjct: 17  GQLGHGDEKTQRQPRLVVAFLGFNVRQVSCGNQHTAIL--MENGEVFTFGRGNFGQLGQG 74

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N               P  ++AL G+ + +VACG +HT A+   G +YTWG G Y
Sbjct: 75  ASVTANVST------------PALVSALQGKHVKQVACGWHHTCALIDNGQLYTWGSGEY 122

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKN 314
           GRLGH ++  +  P+ V+  Q   V      ++AG  +SS    GG L  WG        
Sbjct: 123 GRLGHGDEVRQASPKLVESLQGKEV----TFVAAGGFHSSVIIEGGNLLTWGGGYFGQLG 178

Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS 371
           +GD  D   PK +  +       +  G  H  +   S  + +WG  ++G+LG G   ++ 
Sbjct: 179 HGDETDRKTPKMVKGVQQCIAHEVACGTHHTLMLTQSQEVWTWGSGEFGKLGIGD--EEK 236

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
            A P  +  L+G+ VI ++ G  HS  +   
Sbjct: 237 HAEPIMITALQGVGVIHISTGGFHSAALTSE 267



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 99/231 (42%), Gaps = 69/231 (29%)

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           S EG+ + + G    GQLGHG +              + Q +PR + A  G  + +V+CG
Sbjct: 2   SREGSEVYSWGQGVLGQLGHGDE--------------KTQRQPRLVVAFLGFNVRQVSCG 47

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
             HT  +   G V+T+G G +G+LG                   NV  P A++SA     
Sbjct: 48  NQHTAILMENGEVFTFGRGNFGQLGQGASVTA------------NVSTP-ALVSA----- 89

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS-GWNLRC--MDSGNMHHFVGADSSCISW 354
                                 +  K +  ++ GW+  C  +D+G ++          +W
Sbjct: 90  ----------------------LQGKHVKQVACGWHHTCALIDNGQLY----------TW 117

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G  +YG LG+G   +++S  PK V+ L+G  V  VA G  HS VI++  N+
Sbjct: 118 GSGEYGRLGHGDEVRQAS--PKLVESLQGKEVTFVAAGGFHSSVIIEGGNL 166



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 46/100 (46%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C + H + +      +TWG  E G+LG GD+ +   P +++ L    +     G  H+  
Sbjct: 204 CGTHHTLMLTQSQEVWTWGSGEFGKLGIGDEEKHAEPIMITALQGVGVIHISTGGFHSAA 263

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           +T +G    +G    GQLG G   ++  P  V  +  +++
Sbjct: 264 LTSEGVLYTWGGGDKGQLGHGDENSQNIPVVVEVISCDMS 303


>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Megachile rotundata]
          Length = 1135

 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 173/380 (45%), Gaps = 40/380 (10%)

Query: 10  VEEETGKEKGGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
           VE  T  +K    +FC GST    +G   G  D N++ P  L      +I  +A G    
Sbjct: 68  VEYSTVTDKN---MFCWGSTIHGELGL-GGIEDENILVPRELDFQKATEIEQIACG--EN 121

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           + V +  +G+ Y+ G N+ GQLGH     R R  ++  L  +  KK   G  HT+ V E 
Sbjct: 122 YTVLITRDGQVYSCGNNDYGQLGHEKG--RKRLQLIPGLDAFVFKKVACGAHHTLAVNEW 179

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIE--PSPVRCL-VSEVTATACGADFTVWLSSVEGASIL 185
           G   ++G N  GQLG  S +N IE  P  VR L  S V   ACG +  + L++     + 
Sbjct: 180 GQLFSWGSNAEGQLGLNS-KNLIECVPHMVRALGTSVVVQVACGINHVLALTN--NGKLY 236

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
           + G    GQLG GTD              + + +P+ I++LAG  I  + CG  H++A+ 
Sbjct: 237 SWGSNSDGQLGLGTD-------------VKNEIKPKLISSLAGVPIAFITCGGYHSMAIS 283

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTA 301
             G V+ WG   +G+LG  + ++  +PR++   Q   V       E  +         T 
Sbjct: 284 KSGAVFGWGKNTFGQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTC 343

Query: 302 GGGQLYMWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQ 358
           G G   M+G+L + N  + + P+ +M+L G  +  +  G  H    V +     +WG   
Sbjct: 344 GAG---MYGQLGHGNTSNEILPRQVMELMGSTVTQISCGKRHTLGLVPSRGRVYAWGLGG 400

Query: 359 YGELGYGPYGQKSSAMPKKV 378
            G+LG      +S A P+ V
Sbjct: 401 AGQLGNNI--TRSVATPQVV 418



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 148/333 (44%), Gaps = 36/333 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK---IKKAGAGRSHTVVVTEDGNSLAFGW 136
           + WG    G+LG G  I+ +   +  EL   K   I++   G ++TV++T DG   + G 
Sbjct: 79  FCWGSTIHGELGLGG-IEDENILVPRELDFQKATEIEQIACGENYTVLITRDGQVYSCGN 137

Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N +GQLG    R  ++  P +   V +    ACGA  T  L+  E   + + G    GQL
Sbjct: 138 NDYGQLGHEKGRKRLQLIPGLDAFVFK--KVACGAHHT--LAVNEWGQLFSWGSNAEGQL 193

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  + N               +  P  + AL    +V+VACG NH +A+ + G +Y+WG 
Sbjct: 194 GLNSKNL-------------IECVPHMVRALGTSVVVQVACGINHVLALTNNGKLYSWGS 240

Query: 256 GGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
              G+LG   + K+E  P+ +          P A I+ G  +S   +  G ++ WGK   
Sbjct: 241 NSDGQLGLGTDVKNEIKPKLISSLAG----VPIAFITCGGYHSMAISKSGAVFGWGKNTF 296

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPY 367
                N+  +   P+ L  L    +     G     F+  D    + G   YG+LG+G  
Sbjct: 297 GQLGLNDTRNRNLPRQLQTLQNAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHG-- 354

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              +  +P++V  L G  V  ++CG  H+L +V
Sbjct: 355 NTSNEILPRQVMELMGSTVTQISCGKRHTLGLV 387



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 108/243 (44%), Gaps = 31/243 (12%)

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           AC     V  S+V   ++   G   +G+LG G       +D ++ +       PR +   
Sbjct: 61  ACEPIIAVEYSTVTDKNMFCWGSTIHGELGLG-----GIEDENILV-------PRELDFQ 108

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVL 284
               I ++ACG N+TV +   G VY+ G   YG+LGH +  ++ + +P  +D F    V 
Sbjct: 109 KATEIEQIACGENYTVLITRDGQVYSCGNNDYGQLGHEKGRKRLQLIPG-LDAFVFKKV- 166

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLS-GWNLRCMDS 338
                 + G+ ++      GQL+ WG     +L  N  + +   P M  + G ++    +
Sbjct: 167 ------ACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLIECVPHMVRALGTSVVVQVA 220

Query: 339 GNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             ++H +   ++    SWG    G+LG G    K+   PK +  L G+ +  + CG  HS
Sbjct: 221 CGINHVLALTNNGKLYSWGSNSDGQLGLGT-DVKNEIKPKLISSLAGVPIAFITCGGYHS 279

Query: 397 LVI 399
           + I
Sbjct: 280 MAI 282


>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
          Length = 4167

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 28/265 (10%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G +  CG       G   G  +  ++  T +R L G+ I  VAA     H +AV  +G
Sbjct: 519 KDGAVFTCGLNKSGQCG--NGTFEERVIIATPVRALSGIVINMVAAANGCEHMLAVASDG 576

Query: 78  RCYTWGRNERGQLGHGDKIQRDR-PTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             Y+WG N+RGQLG G  I +   P ++  L  KY I  A     H+ VV+ +G  L FG
Sbjct: 577 AVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFG 636

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            N  GQLG    +++  P  V  L S+V T  ACG   T+ ++S  G  + + G   YGQ
Sbjct: 637 MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAITS--GGEVYSFGKNDYGQ 694

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET---IVKVACGTNHTVAVDSKGYVY 251
           LG G  +  N K             P  +    GE+   IV V+CG  HTV +  KG + 
Sbjct: 695 LGLG--HARNMK------------VPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLI 740

Query: 252 TWGFGGYGRL--GHREQKD--EWVP 272
           TWG   YG+L  G ++ K+  ++VP
Sbjct: 741 TWGRNDYGQLGIGSKDHKNSAQYVP 765



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 159/374 (42%), Gaps = 46/374 (12%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAG 116
           IR +A G      V  D  G  +T G N+ GQ G+G   +R    T V  LS   I    
Sbjct: 504 IRDIAGGNEVLAVVMKD--GAVFTCGLNKSGQCGNGTFEERVIIATPVRALSGIVINMVA 561

Query: 117 A--GRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSE--VTATACGAD 171
           A  G  H + V  DG   ++G+N  GQLG GS I     P  +  L  +  +T  A    
Sbjct: 562 AANGCEHMLAVASDGAVYSWGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYH 621

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            +  +SS     +L  G+   GQLG       +T              P+ + +L+ + I
Sbjct: 622 HSAVVSS--NGELLMFGMNDCGQLGLDHTQHQHT--------------PQLVDSLSSQVI 665

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF--QRNNVLPPEAV 289
            +VACG  HT+A+ S G VY++G   YG+LG    ++  VP  V     + +  +     
Sbjct: 666 TEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKI---VA 722

Query: 290 ISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMY-PKPLMDLSGWNLRCMDSG 339
           +S G  ++   +  G+L  WG+          K++ +   Y P PL       ++    G
Sbjct: 723 VSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSAQYVPLPLSS----KIKTASCG 778

Query: 340 NMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKV--DILEGMHVISVACGYGHS 396
             H  +  ++   + +G    G+LG G     S+ +P  V  + L    V+ +A G+  S
Sbjct: 779 CYHTLILMSNGRVMVFGRNNKGQLGAGSRTLPSADLPLPVPSNSLANDEVVRIAAGFYSS 838

Query: 397 LVIVDRTNVGERLD 410
            ++  R+  G  LD
Sbjct: 839 YILTGRSGEGCGLD 852



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 43  NLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           N+  PT ++  +G  D + VA  C   H V +  +G+  TWGRN+ GQLG G K  ++  
Sbjct: 702 NMKVPTLVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKDHKNSA 761

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             V      KIK A  G  HT+++  +G  + FG N  GQLG+GS
Sbjct: 762 QYVPLPLSSKIKTASCGCYHTLILMSNGRVMVFGRNNKGQLGAGS 806


>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
 gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
           436)]
          Length = 1473

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 171/395 (43%), Gaps = 47/395 (11%)

Query: 23  LFCGST--CWDAVGRRKGALDGNLVSPTRLRPL---VGVDIRFVAAGCVSCHCVAVDVEG 77
           LF   T   W   G   G L G   S  RL P    V  DI  V +G    H +A+  +G
Sbjct: 79  LFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLEDIVSVVSG--DAHSLALGADG 136

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             +TWG N  GQLG G    R  P  V   +   +    AG  H++V+  DG   A+G N
Sbjct: 137 TVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTD--VVAVAAGDFHSLVLKSDGTVWAWGTN 194

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            HGQLG G  +  + P PV  L   V A A G DFT  L+     ++ + G   +GQLG 
Sbjct: 195 FHGQLGQGHTQTGLWPKPVPGL-EGVVALAAGFDFT--LAVHADGAVSSWGANSFGQLGL 251

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           GT              +  +  P  I  L+G  I  VA GT H VA+   G V+TWG   
Sbjct: 252 GT--------------FTQRLSPERIPTLSG--ITSVAAGTYHAVALGKDGTVWTWGSNS 295

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN--- 314
            G+LG     D  VP  +        +   A + AGS+       GG +  WG   +   
Sbjct: 296 SGQLGDGTWNDRAVPAPLPGVGGARAV---ASLDAGSL---ALLEGGDVLAWGANNSGQL 349

Query: 315 -NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
            +GD  D   P  + +LS   +  +  G  H   +  D +  +WG    G+LG+G  G +
Sbjct: 350 GDGDTADRSTPSLVPELSA--VTAVVGGAQHALALRKDGTLWAWGGGLAGQLGHG--GSE 405

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +P  V  L   +V S+A G  HSL  ++  +V
Sbjct: 406 RHVVPATVMGL--TNVTSMATGSFHSLAALEDGSV 438



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 163/349 (46%), Gaps = 42/349 (12%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R VAA     H +AV ++G  +TWGRN  GQLG G    R RP  VS L+   +    A
Sbjct: 469 VRAVAA--AGHHSIAVAMDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT--SVLAIAA 524

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G SH + +  DG+  A+G+N  GQLG G+  +++ P  V  L + + + A G  F++ L+
Sbjct: 525 GGSHVLALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVPGL-APIQSVAAGTYFSMALA 583

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           +    ++   G    GQLG G   +              +  P A+  L+   I  ++ G
Sbjct: 584 N--DGTVWTWGEGFEGQLGDGGGVQ--------------RLSPVAVKGLS--DIRNISVG 625

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
           + H +AV   G V+ WG    G+LG     D + P +V    RN  L     +S G  +S
Sbjct: 626 SAHALAVRGDGTVWAWGDNNEGQLGDGSWMDRFAPVQV----RN--LTGITAVSGGRSHS 679

Query: 298 SCTAGGGQLYMWGK--LKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
                 G +  WG       GD  +     P  +  LSG  ++ +  G++H   + AD +
Sbjct: 680 LALHADGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLSG--IQALHPGHLHVLALHADKT 737

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              WG+ ++G+LG G  G   SA P +V  +    V  +A G  H+L++
Sbjct: 738 LRGWGYNRFGQLGLGAAGW--SARPVQVRGIG--RVERLAAGRAHALLV 782



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/345 (28%), Positives = 153/345 (44%), Gaps = 54/345 (15%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  + WG    GQLGHG   +   P  V  L+   +     G  H++   ED
Sbjct: 378 HALALRKDGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTN--VTSMATGSFHSLAALED 435

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------ADFTVWLSSVEG 181
           G+  A+G N +GQLG G++     P  V  L S     A G        D TVW      
Sbjct: 436 GSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPSVRAVAAAGHHSIAVAMDGTVW------ 489

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
                 G    GQLG GT     T+D         + RP A++ L   +++ +A G +H 
Sbjct: 490 ----TWGRNAAGQLGDGT-----TRD---------RARPVAVSGL--TSVLAIAAGGSHV 529

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+ S G V+ WG+   G+LG     D+  P RV        L P   ++AG+  S   A
Sbjct: 530 LALRSDGDVWAWGYNALGQLGDGTSGDKLTPVRVP------GLAPIQSVAAGTYFSMALA 583

Query: 302 GGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
             G ++ W     G+L + G    + P  +  LS  ++R +  G+ H   V  D +  +W
Sbjct: 584 NDGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLS--DIRNISVGSAHALAVRGDGTVWAW 641

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G    G+LG G +  + +  P +V  L G  + +V+ G  HSL +
Sbjct: 642 GDNNEGQLGDGSWMDRFA--PVQVRNLTG--ITAVSGGRSHSLAL 682



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 156/368 (42%), Gaps = 58/368 (15%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS- 105
            P R+  L   D+  VAAG      VAV  +G  ++WG NE GQLG G    R  P  V  
Sbjct: 1061 PQRVAELS--DVESVAAG--EQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKI 1116

Query: 106  ELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
              SK + +   GA   H V +  DG   A+G N  GQLG G+      P  +R  V+ VT
Sbjct: 1117 GGSKARTVVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRG-VTRVT 1175

Query: 165  ATACGA--------DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            A + GA        D TVW     G          +GQLG GT                A
Sbjct: 1176 AVSTGAWHSLALRLDGTVWAWGANG----------FGQLGDGTTT--------------A 1211

Query: 217  QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
            +  P  +  L    +V +A G  H+VAV S G V+TWG+  +G+LG    +   +P  V 
Sbjct: 1212 RAVPVPVQGL--RDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALP--VQ 1267

Query: 277  VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSG 330
            V +   V      ++ G  +S      G +  WG   +   GD    D   P  L D+ G
Sbjct: 1268 VHKLEGV----QAVTGGDHHSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDG 1323

Query: 331  WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
              L  + +G  H   +G D +  +WG   +G+LG G  G +   +PK V  L      ++
Sbjct: 1324 --LTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPA--ATAI 1379

Query: 390  ACGYGHSL 397
              G  HS 
Sbjct: 1380 GAGAWHSF 1387



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 147/339 (43%), Gaps = 42/339 (12%)

Query: 60   FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
             V  G    H VA+  +G    WG N  GQLG G   +R  P  +  +++      GA  
Sbjct: 1124 VVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTTTRRSSPGEIRGVTRVTAVSTGA-- 1181

Query: 120  SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
             H++ +  DG   A+G N  GQLG G+      P PV+ L  +V A A G   +V + S 
Sbjct: 1182 WHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQGL-RDVVAIAAGGYHSVAVRS- 1239

Query: 180  EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               ++   G   +GQLG GT               E++  P  +  L  E +  V  G +
Sbjct: 1240 -DGTVWTWGYNTFGQLGDGTS--------------ESRALPVQVHKL--EGVQAVTGGDH 1282

Query: 240  HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSS 298
            H++A+ + G V  WG    G+LG   + D + P R+ DV     V        AG+ ++ 
Sbjct: 1283 HSLALHADGTVSGWGHNASGQLGDGSRTDRYTPVRLKDVDGLTEV-------RAGAAHTV 1335

Query: 299  CTAGGGQLYMWGKLKNN--GDD------WMYPKPLMDLSGWNLRCMDSGNMHHFV-GADS 349
                 G ++ WG   +   GD        + PKP+  L       + +G  H F  G + 
Sbjct: 1336 ALGKDGTVWTWGDNAHGQLGDGVTGPRMRLVPKPVSGLPA--ATAIGAGAWHSFASGPEE 1393

Query: 350  SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
               +WG   +G+LG G    +  A P+++ +L G+ VI+
Sbjct: 1394 GAFTWGRNSHGQLGVGDNAPR--AEPQRMKLLSGLKVIA 1430



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 105/348 (30%), Positives = 146/348 (41%), Gaps = 47/348 (13%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           S H +A   +G  + WGRN  GQLG G   +R  P  V  L    ++   A   H++ V 
Sbjct: 426 SFHSLAALEDGSVWAWGRNSYGQLGDGTVTERHVPVRVPGLPS--VRAVAAAGHHSIAVA 483

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            DG    +G N  GQLG G+ R+   P  V  L S V A A G    + L S     +  
Sbjct: 484 MDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLTS-VLAIAAGGSHVLALRS--DGDVWA 540

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G    GQLG GT  +  T              P  +  LA   I  VA GT  ++A+ +
Sbjct: 541 WGYNALGQLGDGTSGDKLT--------------PVRVPGLA--PIQSVAAGTYFSMALAN 584

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ--RNNVLPPEAVISAGSVNSSCTAGGG 304
            G V+TWG G  G+LG         P  V      RN        IS GS ++    G G
Sbjct: 585 DGTVWTWGEGFEGQLGDGGGVQRLSPVAVKGLSDIRN--------ISVGSAHALAVRGDG 636

Query: 305 QLYMWGKLKNNGD----DWM---YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
            ++ WG   N G      WM    P  + +L+G  +  +  G  H   + AD +  +WG 
Sbjct: 637 TVWAWGD-NNEGQLGDGSWMDRFAPVQVRNLTG--ITAVSGGRSHSLALHADGTVRAWGS 693

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI-VDRT 403
             YG+LG G     S  +P  +  L G+  +    G+ H L +  D+T
Sbjct: 694 NGYGQLGDGTL--TSRVLPSVIPGLSGIQALH--PGHLHVLALHADKT 737



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 156/376 (41%), Gaps = 54/376 (14%)

Query: 41   DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
            DG      R   + GV   R VA+G    H + +  +G  +TWG N+RGQLG G    R 
Sbjct: 801  DGGTTHGARAVTVRGVSCARSVASG--GQHSLVLACDGTVWTWGENQRGQLGDGTTSARV 858

Query: 100  RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
             P  V  L    +  AG G + ++ +  DG   A+G N  GQ+G G++ + + P  +  L
Sbjct: 859  APGRVEGLEGI-VAVAGGGDT-SLALRSDGTVWAWGANASGQVGDGTVEDRLTPRRIEAL 916

Query: 160  -------VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
                   + E  A A G D TVW            G    GQLG G +            
Sbjct: 917  SDVMVIALGESHALAVGEDGTVWAW----------GANASGQLGDGGETP---------- 956

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                   P  +  L  E +  VA G   ++AV   G  + WG    G+LG    +   VP
Sbjct: 957  ----SLLPARVKGL--EGVGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRVP 1010

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDW-----MYPKPL 325
             RV   +          +SAG+ ++      G ++ WG   L   GD       M+P+ +
Sbjct: 1011 HRVASVKGLRA------VSAGAHHAMALGEDGAVWAWGDNTLGQLGDGTSAFTVMWPQRV 1064

Query: 326  MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
             +LS  ++  + +G      V  D +  SWG  +YG+LG G  G + S    K+   +  
Sbjct: 1065 AELS--DVESVAAGEQFSVAVAHDGTAFSWGSNEYGQLGDGKTGPRLSPAEVKIGGSKAR 1122

Query: 385  HVISVACGYGHSLVIV 400
             V++V     H++ ++
Sbjct: 1123 TVVTVGAWGQHAVALM 1138



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 92/337 (27%), Positives = 156/337 (46%), Gaps = 38/337 (11%)

Query: 68   CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
             H +A+  +     WG N  GQLG G      RP  V  + +  +++  AGR+H ++V  
Sbjct: 727  LHVLALHADKTLRGWGYNRFGQLGLGAAGWSARPVQVRGIGR--VERLAAGRAHALLVRA 784

Query: 128  DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
            DG+ +A+G N  GQLG G   +      VR  VS   + A G   ++ L+     ++   
Sbjct: 785  DGSVVAWGANASGQLGDGGTTHGARAVTVRG-VSCARSVASGGQHSLVLAC--DGTVWTW 841

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            G  Q GQLG GT        +S ++A      P  +  L  E IV VA G + ++A+ S 
Sbjct: 842  GENQRGQLGDGT--------TSARVA------PGRVEGL--EGIVAVAGGGDTSLALRSD 885

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G V+ WG    G++G    +D   PRR++    ++V+    VI+ G  ++      G ++
Sbjct: 886  GTVWAWGANASGQVGDGTVEDRLTPRRIEAL--SDVM----VIALGESHALAVGEDGTVW 939

Query: 308  MW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
             W     G+L + G+   + P  +  L G  +  + +G      V  D +  +WG  + G
Sbjct: 940  AWGANASGQLGDGGETPSLLPARVKGLEG--VGSVAAGRAFSLAVRDDGTAWAWGANESG 997

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            +LG G    +S  +P +V  ++G+  +S    +  +L
Sbjct: 998  QLGDGS--NQSRRVPHRVASVKGLRAVSAGAHHAMAL 1032



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 95/347 (27%), Positives = 149/347 (42%), Gaps = 43/347 (12%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGR 119
           +AAG    H + +   G  + WG N  GQLG  D   QR  P  +  L    I    +G 
Sbjct: 71  IAAGA--QHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVLE--DIVSVVSGD 126

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
           +H++ +  DG    +G N  GQLG G+  +  EP  V    ++V A A G DF   +   
Sbjct: 127 AHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGF-TDVVAVAAG-DFHSLVLKS 184

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           +G ++   G   +GQLG G                +    P+ +  L  E +V +A G +
Sbjct: 185 DG-TVWAWGTNFHGQLGQGH--------------TQTGLWPKPVPGL--EGVVALAAGFD 227

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
            T+AV + G V +WG   +G+LG         P R+        L     ++AG+ ++  
Sbjct: 228 FTLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIP------TLSGITSVAAGTYHAVA 281

Query: 300 TAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWN-LRCMDSGNMHHFVGADSSCI 352
               G ++ WG   +   GD    D   P PL  + G   +  +D+G++    G D   +
Sbjct: 282 LGKDGTVWTWGSNSSGQLGDGTWNDRAVPAPLPGVGGARAVASLDAGSLALLEGGD--VL 339

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +WG    G+LG G    +S+  P  V  L    V +V  G  H+L +
Sbjct: 340 AWGANNSGQLGDGDTADRST--PSLVPELSA--VTAVVGGAQHALAL 382



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 144/340 (42%), Gaps = 40/340 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SP  +R +     R  A    + H +A+ ++G  + WG N  GQLG G    R  P  V 
Sbjct: 1164 SPGEIRGVT----RVTAVSTGAWHSLALRLDGTVWAWGANGFGQLGDGTTTARAVPVPVQ 1219

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             L    +    AG  H+V V  DG    +G+N  GQLG G+  +   P  V  L  E   
Sbjct: 1220 GL--RDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSESRALPVQVHKL--EGVQ 1275

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
               G D        +G ++   G    GQLG G+  +  T    V+L             
Sbjct: 1276 AVTGGDHHSLALHADG-TVSGWGHNASGQLGDGSRTDRYTP---VRLKDV---------- 1321

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
               + + +V  G  HTVA+   G V+TWG   +G+LG         PR   V +  + LP
Sbjct: 1322 ---DGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVTG----PRMRLVPKPVSGLP 1374

Query: 286  PEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDW--MYPKPLMDLSGWNLRCMDSG 339
                I AG+ +S  +      + WG+  +     GD+     P+ +  LSG  L+ +  G
Sbjct: 1375 AATAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAPRAEPQRMKLLSG--LKVIAGG 1432

Query: 340  -NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
             +    +  +   +SWG + +G LG G  GQ++S  P +V
Sbjct: 1433 ADTSLAMTQEGVLMSWGSSLHGTLGLGVLGQRAS--PGRV 1470



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 119/288 (41%), Gaps = 52/288 (18%)

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---- 158
           +   LS  +I    AG  H++ +T  G   A+G N  GQLG G+  +    SP R     
Sbjct: 62  LAEPLSPMRIA---AGAQHSLFLTPTGAVWAWGGNSAGQLG-GADTSFQRLSPARLPVLE 117

Query: 159 -LVSEVT----ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            +VS V+    + A GAD TVW            G    GQLG GT  +           
Sbjct: 118 DIVSVVSGDAHSLALGADGTVW----------TWGSNSSGQLGDGTTTD----------- 156

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
              +  P+ +       +V VA G  H++ + S G V+ WG   +G+LG    +    P+
Sbjct: 157 ---RAEPQRVEGF--TDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGLWPK 211

Query: 274 RVDVFQRNNVLPPE-----AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
            V   +    L        AV + G+V+S      GQL + G         + P+ +  L
Sbjct: 212 PVPGLEGVVALAAGFDFTLAVHADGAVSSWGANSFGQLGL-GTFTQR----LSPERIPTL 266

Query: 329 SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
           SG  +  + +G  H   +G D +  +WG    G+LG G +  ++   P
Sbjct: 267 SG--ITSVAAGTYHAVALGKDGTVWTWGSNSSGQLGDGTWNDRAVPAP 312



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 58/119 (48%), Gaps = 7/119 (5%)

Query: 42   GNLVSPTRLR----PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
            G+ V+  R+R    P+ G+     A G  + H  A   E   +TWGRN  GQLG GD   
Sbjct: 1355 GDGVTGPRMRLVPKPVSGLPAA-TAIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDNAP 1413

Query: 98   RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            R  P  +  LS  K+   GA  S  + +T++G  +++G + HG LG G +     P  V
Sbjct: 1414 RAEPQRMKLLSGLKVIAGGADTS--LAMTQEGVLMSWGSSLHGTLGLGVLGQRASPGRV 1470



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 24/178 (13%)

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVI 290
           +++A G  H++ +   G V+ WG    G+LG  +   + + P R+ V         E ++
Sbjct: 69  MRIAAGAQHSLFLTPTGAVWAWGGNSAGQLGGADTSFQRLSPARLPVL--------EDIV 120

Query: 291 S--AGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMH 342
           S  +G  +S      G ++ WG   +   GD    D   P+ +   +  ++  + +G+ H
Sbjct: 121 SVVSGDAHSLALGADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFT--DVVAVAAGDFH 178

Query: 343 HFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             V  +D +  +WG   +G+LG G    ++   PK V  LEG  V+++A G+  +L +
Sbjct: 179 SLVLKSDGTVWAWGTNFHGQLGQGH--TQTGLWPKPVPGLEG--VVALAAGFDFTLAV 232


>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
           CCMP2712]
          Length = 316

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 19/234 (8%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  L+  +G  +R VA G V  H   V   G    WG N+ GQ G G + Q + PT V 
Sbjct: 19  TPRMLKKAMGRQVRDVACGLV--HSAMVMGSGEVLCWGENKYGQCGTGTQEQTEHPTFVG 76

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L          G +HTVVV+EDG   ++G   +GQLG GS  N   PS V+ +   +V 
Sbjct: 77  SLFGVACMSVSCGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQAMRGRDVL 136

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A  CG   TV +  + G  +   G  + GQ G G+ ++  +              P+ + 
Sbjct: 137 AVTCGVGHTVIV--LAGGELYTCGWNKNGQCGVGSTSDLLS--------------PQCVE 180

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +L GE +   +CG  HT  V   G V+T+G G  G+LGH + +D  +PRRV   
Sbjct: 181 SLRGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRVGAL 234



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 108/240 (45%), Gaps = 21/240 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT +  L GV    V+  C   H V V  +GR ++WG    GQLGHG +     P++V  
Sbjct: 72  PTFVGSLFGVACMSVS--CGGAHTVVVSEDGRVFSWGLGANGQLGHGSRDNLTTPSVVQA 129

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           +    +     G  HTV+V   G     GWNK+GQ G GS  + + P  V  L  E V  
Sbjct: 130 MRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKNGQCGVGSTSDLLSPQCVESLRGEGVQH 189

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            +CGA  T  ++   G  +   G    GQLGHG     + +D S+         PR + A
Sbjct: 190 ASCGAGHTAVVTG--GGEVFTFGSGSCGQLGHG-----DCQDLSM---------PRRVGA 233

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNV 283
           L G  +  VACG  +TV       V+ +G    G+LG       ++  PR+++  +   V
Sbjct: 234 LVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPYLSEPRQMEFLKEEEV 293



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/331 (23%), Positives = 138/331 (41%), Gaps = 31/331 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG+        G+++    P ++ +    +++    G  H+ +V   G  L +G NK+
Sbjct: 2   YFWGQAGSAV---GEQVSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGEVLCWGENKY 58

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQ G+G+      P+ V  L      + +CG   TV +S  E   + + GL   GQLGHG
Sbjct: 59  GQCGTGTQEQTEHPTFVGSLFGVACMSVSCGGAHTVVVS--EDGRVFSWGLGANGQLGHG 116

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           + +   T              P  + A+ G  ++ V CG  HTV V + G +YT G+   
Sbjct: 117 SRDNLTT--------------PSVVQAMRGRDVLAVTCGVGHTVIVLAGGELYTCGWNKN 162

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----N 314
           G+ G     D   P+ V+  +   V       S G+ +++   GGG+++ +G        
Sbjct: 163 GQCGVGSTSDLLSPQCVESLRGEGVQHA----SCGAGHTAVVTGGGEVFTFGSGSCGQLG 218

Query: 315 NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKS 371
           +GD  D   P+ +  L G  +  +  G  +    A D     +G    G+LG        
Sbjct: 219 HGDCQDLSMPRRVGALVGIVMSMVACGEEYTVCAAFDHRVFGFGLNNVGQLGASSTSHPY 278

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
            + P++++ L+   V    C     + +  R
Sbjct: 279 LSEPRQMEFLKEEEVELCKCNQSEVIALTRR 309


>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
           trifallax]
          Length = 685

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 177/412 (42%), Gaps = 51/412 (12%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV--AAGCVSCHCVAVDV 75
           + G++L  G   ++  G+     + ++ +P ++  L  + I  +  A GC +   ++ D 
Sbjct: 89  RNGDVLTVG---FNGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQD- 144

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS---- 131
            G+ YT G N  GQLGHG +     PT+V  L   ++        H+++VT+D       
Sbjct: 145 -GKLYTCGYNNYGQLGHGTQSNLSTPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQASNQ 203

Query: 132 ----LAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILN 186
                + G N +GQLG     +EI P  +R L   +V  TACG   +V++ +V G  + +
Sbjct: 204 QTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTRQVIQTACGLHHSVFV-TVHG-EVFS 261

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G    GQLGH      N              +P  I +L  + IV+ ACG  HT+    
Sbjct: 262 CGFNDNGQLGHNDTKSRN--------------QPVLIESLKNKFIVQAACGYYHTLVRRD 307

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVN--------- 296
            G +Y +G    G+LG        + P+++  F    +       S G+ N         
Sbjct: 308 TGEIYAFGRNDKGQLGIETNGQALIQPKQIQEF----LTVSNIQHSGGNQNQLHSGQEHN 363

Query: 297 --SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCIS 353
             SS + G     M G  ++N  +   P+        N+  +  G  H     +S    +
Sbjct: 364 QPSSQSLGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESGQLFT 423

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +G   +G+LG G    +   +PK+V  L    VI +A G+ H++V+V +  V
Sbjct: 424 FGRGNHGQLGQG--NTEDQKLPKQVASLHDKKVIGIAGGFYHTIVLVKQKKV 473


>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
           caballus]
          Length = 551

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +    + P RL  L G  +  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQST-IEPRRLDSLTGKKVACLSYGS-GPHVVLATSEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V    ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQ--MCSMAVVDTGEVYVWGYSGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + + ACG  HT+ +  +G VY WG   
Sbjct: 240 GGSGN--------------QPTPCRVAALQGIRVQRAACGYAHTLVLTDEGQVYVWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P  + + +++ ++   A  S  +  S+    GG +YMWG+ +
Sbjct: 286 YGQLGTGNKSNQPYPTPI-IVEKDRIIEIAACHSTHT--SAAKTQGGHVYMWGQCR 338



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 70/309 (22%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   +V   + G+   V L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LTGKKVACLSYGSGPHVVLATSEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKRVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCM 336
              +N V+          VN +C    GQ+                         ++  +
Sbjct: 200 GCLQNKVV----------VNIAC----GQM------------------------CSMAVV 221

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           D+G ++           WG++  G+LG G  G + +  P +V  L+G+ V   ACGY H+
Sbjct: 222 DTGEVY----------VWGYSGNGQLGLGGSGNQPT--PCRVAALQGIRVQRAACGYAHT 269

Query: 397 LVIVDRTNV 405
           LV+ D   V
Sbjct: 270 LVLTDEGQV 278


>gi|170062906|ref|XP_001866871.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167880719|gb|EDS44102.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 679

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 33/333 (9%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    G+LG G  ++ Q   P  +       +++A  G SHT+++T+DG     G N
Sbjct: 4   YCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNN 63

Query: 138 KHGQLG--SGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            HGQLG  + ++ N+  P  +  L +  VT  +CG   ++ L++     + + G    GQ
Sbjct: 64  DHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTN--WGQLFSWGSNATGQ 120

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGH  D           ++Y   P PR I ++A +T+V+++CG +H +A+ + G ++ WG
Sbjct: 121 LGHDLD----------MVSY---PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWG 167

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
              YG+LG      + VP    V     +  P A I+ G  +S   +  G ++ WGK   
Sbjct: 168 ANEYGQLGLGTTGKK-VPTATLVKSLAGI--PIAFIACGGNHSFAVSKSGAIFGWGKNTF 224

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
                N+ D   YP  L  L    +R +  G +   F+  +    + G   +G+LG+G +
Sbjct: 225 GQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G +   +P+ V  L G  +  +ACG  H+L  V
Sbjct: 285 GNE--ILPRMVFELMGSKITQIACGRKHTLAFV 315



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 19/194 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
           V   C   HC+A+   G  + WG NE GQLG G   ++    T+V  L+   I     G 
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H+  V++ G    +G N  GQLG   + +   P+ ++ L S  V   +CG DF+V+L+ 
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
             G  +   GL  +GQLGHGT                 +  PR +  L G  I ++ACG 
Sbjct: 265 EGG--VFTCGLGTFGQLGHGTHGN--------------EILPRMVFELMGSKITQIACGR 308

Query: 239 NHTVA-VDSKGYVY 251
            HT+A V S+G VY
Sbjct: 309 KHTLAFVPSRGKVY 322



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 74/156 (47%), Gaps = 5/156 (3%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   G+  +  +G   G     + + T ++ L G+ I F+A G    H  AV   G  
Sbjct: 161 GELFAWGANEYGQLGL--GTTGKKVPTATLVKSLAGIPIAFIACG--GNHSFAVSKSGAI 216

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG+N  GQLG  D   R  PT +  L    ++    G   +V +T++G     G    
Sbjct: 217 FGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTF 276

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           GQLG G+  NEI P  V  L+ S++T  ACG   T+
Sbjct: 277 GQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTL 312


>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1391

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 148/331 (44%), Gaps = 31/331 (9%)

Query: 80  YTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           + WG +  GQLG    G +  ++    V+ LS  +++    G+ HT +V +DG     G 
Sbjct: 4   FCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVLDDGTLYMCGA 63

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N  GQLG    RN+ +P  V  L + V    ACG D T+ +S  +   +L  G    GQ 
Sbjct: 64  NSKGQLGQD--RNQYKPVQVSALETVVIKHVACGDDHTLAVS--DRGQVLGWGRNDRGQC 119

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  T +             E +PRPR +  LA    VKV CG+ H++A+   G +++WG 
Sbjct: 120 GLATGD------------IENKPRPRILKHLASYQFVKVCCGSLHSMALTRDGRLFSWGD 167

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
             YG+LG       +  R  ++     V  P   ++ G  +S      G ++ WGK    
Sbjct: 168 NTYGQLGIGTLVTNYTDRPTELTSLRGV--PLVRVACGGFHSFALTISGSVFGWGKNDVG 225

Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYG 368
                N ++  YP  L ++    ++ +  G  H   + AD     +G    G+LG+G   
Sbjct: 226 QLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHG--S 283

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +   P+KV  L G  +  V CG  H+LV+
Sbjct: 284 NYNEVNPRKVIDLMGSDITQVTCGKHHTLVL 314



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 24/238 (10%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DR 100
           N   P  LR L     +FV   C S H +A+  +GR ++WG N  GQLG G  +    DR
Sbjct: 468 NKPRPRILRHLASY--QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDR 525

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           PT ++ L    + +   G  H+  +T  G+   +G N  GQLG G+  N+  P+ +R + 
Sbjct: 526 PTELTSLRGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMR 585

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQP 218
           S+ V   ACG D T  L++  G  +   G    GQLGHG++ NE N              
Sbjct: 586 SQMVKHIACGQDHTAMLTADGGVFLFGQG--SEGQLGHGSNYNEVN-------------- 629

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            PR +  L G  I +V CG +HT+ ++ SKG +Y +G G +G+LG  E +    P+RV
Sbjct: 630 -PRKVIDLMGSDITQVTCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRV 686



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 160/382 (41%), Gaps = 66/382 (17%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAG 116
           +FV   C S H +A+  +GR ++WG N  GQLG G  +    DRPT ++ L    + +  
Sbjct: 142 QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTELTSLRGVPLVRVA 201

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
            G  H+  +T  G+   +G N  GQLG G+  N+  P+ +R + S+ V   ACG D T  
Sbjct: 202 CGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKHIACGQDHTAM 261

Query: 176 LSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           L++  G  +   G    GQLGHG++ NE N               PR +  L G  I +V
Sbjct: 262 LTADGGVFLFGQG--SEGQLGHGSNYNEVN---------------PRKVIDLMGSDITQV 304

Query: 235 ACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
            CG +HT+ ++ SKG +Y +G G +G+LG  E +    P+RV          P    S+ 
Sbjct: 305 TCGKHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVP--------GPWVPHSST 356

Query: 294 SVNSS-------CTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW--------------- 331
             NSS       C   GG  + +    N  DD        D+S                 
Sbjct: 357 EKNSSSKGRVVRCIYAGGH-HCFSTATNAADDIQIKLLFRDISTRIFFQLTXXXXXXXXX 415

Query: 332 ------------NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKV 378
                        ++ +  G+ H    +D    + WG    G+ G      ++   P+ +
Sbjct: 416 XXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRIL 475

Query: 379 DILEGMHVISVACGYGHSLVIV 400
             L     + V CG  HS+ + 
Sbjct: 476 RHLASYQFVKVCCGSLHSMALT 497



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 150/331 (45%), Gaps = 33/331 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R  +  C   H   V  +G  Y  G N +GQLG  D+ Q  +P  VS L    IK    G
Sbjct: 38  RVQSISCGKHHTGIVLDDGTLYMCGANSKGQLGQ-DRNQY-KPVQVSALETVVIKHVACG 95

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQ--LGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
             HT+ V++ G  L +G N  GQ  L +G I N+  P  ++ L S +     CG+  ++ 
Sbjct: 96  DDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHLASYQFVKVCCGSLHSMA 155

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      + + G   YGQLG GT            L      RP  + +L G  +V+VA
Sbjct: 156 LT--RDGRLFSWGDNTYGQLGIGT------------LVTNYTDRPTELTSLRGVPLVRVA 201

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG  H+ A+   G V+ WG    G+LG   ++++  P       RN        I+ G  
Sbjct: 202 CGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYP----TLLRNMRSQMVKHIACGQD 257

Query: 296 NSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFV--GA 347
           +++     G ++++G+       +G ++  + P+ ++DL G ++  +  G  H  V  G+
Sbjct: 258 HTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHTLVLEGS 317

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
                ++G   +G+LG      +S + P++V
Sbjct: 318 KGRLYAFGQGIHGQLGQDE--ARSCSNPQRV 346



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 122/266 (45%), Gaps = 30/266 (11%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ--LGHGDKIQRDRPTIVSELSKY 110
           L  V I+ VA G    H +AV    +   WGRN+RGQ  L  GD   + RP I+  L+ Y
Sbjct: 424 LETVVIKHVACG--DDHTLAVSDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHLASY 481

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----EVTAT 166
           +  K   G  H++ +T DG   ++G N +GQLG G++       P   L S     +   
Sbjct: 482 QFVKVCCGSLHSMALTRDGRLFSWGDNTYGQLGIGTLVTNYTDRPTE-LTSLRGVPLVRV 540

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACG  F  +  ++ G S+   G    GQLG G                E +  P  +  +
Sbjct: 541 ACGG-FHSFALTISG-SVFGWGKNDVGQLGLGNK--------------ENKSYPTLLRNM 584

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             + +  +ACG +HT  + + G V+ +G G  G+LGH    +E  PR+V     +++   
Sbjct: 585 RSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDI--- 641

Query: 287 EAVISAGSVNSSCTAGG-GQLYMWGK 311
              ++ G  ++    G  G+LY +G+
Sbjct: 642 -TQVTCGKHHTLVLEGSKGRLYAFGQ 666



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 4/152 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT L  L GV +  V   C   H  A+ + G  + WG+N+ GQLG G+K  +  PT++  
Sbjct: 186 PTELTSLRGVPL--VRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRN 243

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           +    +K    G+ HT ++T DG    FG    GQLG GS  NE+ P  V  L+ S++T 
Sbjct: 244 MRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQ 303

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
             CG   T+ L   +G  +   G   +GQLG 
Sbjct: 304 VTCGKHHTLVLEGSKG-RLYAFGQGIHGQLGQ 334



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 151/389 (38%), Gaps = 52/389 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD-VEGRCYTWGRNERGQLGHGDKIQRDRP 101
           N V+P ++  L+G DI  V  G    H + ++  +GR Y +G+   GQLG  +      P
Sbjct: 286 NEVNPRKVIDLMGSDITQVTCG--KHHTLVLEGSKGRLYAFGQGIHGQLGQDEARSCSNP 343

Query: 102 TIVS----ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
             V       S  +   +  GR    +     +  +   N    +    +  +I      
Sbjct: 344 QRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFF 403

Query: 158 CLVSE--------------------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            L                       +   ACG D T+ +S  +   +L  G    GQ G 
Sbjct: 404 QLTXXXXXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVS--DRVQVLGWGRNDRGQCGL 461

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            T +             E +PRPR +  LA    VKV CG+ H++A+   G +++WG   
Sbjct: 462 ATGD------------IENKPRPRILRHLASYQFVKVCCGSLHSMALTRDGRLFSWGDNT 509

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           YG+LG       +  R  ++     V  P   ++ G  +S      G ++ WGK      
Sbjct: 510 YGQLGIGTLVTNYTDRPTELTSLRGV--PLVRVACGGFHSFALTISGSVFGWGKNDVGQL 567

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
              N ++  YP  L ++    ++ +  G  H   + AD     +G    G+LG+G     
Sbjct: 568 GLGNKENKSYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHG--SNY 625

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +   P+KV  L G  +  V CG  H+LV+
Sbjct: 626 NEVNPRKVIDLMGSDITQVTCGKHHTLVL 654


>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
 gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
          Length = 4625

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 33/331 (9%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N+V+P  + PL  + I  ++      H + +      ++WG  E G+LGHGDK+  + P 
Sbjct: 3842 NIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPR 3901

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
             +  L   +I     G SH+  +T  G    +G  ++G+LG G   + ++P  +  L S 
Sbjct: 3902 KIEALLGKQIVHISCGSSHSAAITSKGELYTWGKGRYGRLGHGDGDDCLKPKLLEALKSY 3961

Query: 162  EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +V   ACG+     L+  +   + + G   YG+LG G                +   +P 
Sbjct: 3962 KVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRG--------------GSDGCKKPL 4007

Query: 222  AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             I +L G  + KV CG+  +VA+   G +YTWG G Y RLGH        PR+V   Q  
Sbjct: 4008 RIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQGK 4067

Query: 282  NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLM--DLSGWNLRC 335
             ++     ++AGS++       G+++ WG        NG     P+P +   L    L  
Sbjct: 4068 QIV----TVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPEPTLVTVLENVKLNR 4123

Query: 336  MDSGNMHHFVGADSSCISWGHAQYGELGYGP 366
            +  G+ H F        +W      ++GY P
Sbjct: 4124 VGCGSAHSF--------AWSTEAPIDIGYMP 4146



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 151/355 (42%), Gaps = 33/355 (9%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
            N+  P +L  L   ++ FV    V     H + +  EG+ ++WG    G+LGHGD   R 
Sbjct: 2941 NISIPVQLDTL---NMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRL 2997

Query: 100  RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
             PT++  L    I +   G SH+  VT DG    +G   +G+LG G  +    P  V+ L
Sbjct: 2998 SPTLIEALESKLIVEIACGSSHSAAVTADGELYTWGLGDYGRLGHGDSKTLHIPKQVKAL 3057

Query: 160  VS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
               +V   ACG+     L+  +   + + G   +G+LG G     N              
Sbjct: 3058 QDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNI------------- 3104

Query: 219  RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
             P+ I AL G  + ++ACG   ++A+ + G V+TWG G Y RLGH        P+ ++  
Sbjct: 3105 -PQKIDALCGRDVCRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGP 3163

Query: 279  QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLR 334
             +   +     I+ G+++       G++Y WG      + NG+  +  +P + L      
Sbjct: 3164 LKKKRITE---IAVGALHCLAVTDTGEVYSWGDNDHGQQGNGNTTVNKRPQICLGE---- 3216

Query: 335  CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +D   + H     S  I+W       + Y P    S   P     ++   ++++
Sbjct: 3217 -LDGVKISHIACGSSHSIAWCGNLQLTVSYVPVPMLSVKDPLGSSFMKDNEIMAI 3270



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 76/333 (22%)

Query: 74   DVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            D++ R + WG N++GQLG   G K++   PT +  ++  +      G     +VT DG  
Sbjct: 2866 DIDSRVFVWGLNDKGQLGGCKGSKVKS--PTEMKNIAALRPVSIAGGSKTVFIVTYDGKV 2923

Query: 132  LAFGWNKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNA 187
               G   +G+LG G+  N   P  +  L    V +VT    G      L       + + 
Sbjct: 2924 YVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHS---LCITREGKVFSW 2980

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            G    G+LGHG        D + +L+      P  I AL  + IV++ACG++H+ AV + 
Sbjct: 2981 GEGIDGKLGHG--------DVTSRLS------PTLIEALESKLIVEIACGSSHSAAVTAD 3026

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G +YTWG G YGRLGH + K   +P++V   Q   V+     I+ GS ++   A      
Sbjct: 3027 GELYTWGLGDYGRLGHGDSKTLHIPKQVKALQDYKVID----IACGSRDAQTLA------ 3076

Query: 308  MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGP 366
                                                    D++C+ SWG   +G+LG G 
Sbjct: 3077 --------------------------------------LTDNNCVWSWGDGDFGKLGRG- 3097

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             G +   +P+K+D L G  V  +ACG   SL +
Sbjct: 3098 -GSEGCNIPQKIDALCGRDVCRIACGAQFSLAL 3129



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/369 (24%), Positives = 166/369 (44%), Gaps = 44/369 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SPT ++ +  +    +A G  +   V  D  G+ Y  G    G+LG G+      P  + 
Sbjct: 2892 SPTEMKNIAALRPVSIAGGSKTVFIVTYD--GKVYVSGEGANGRLGLGNTENISIPVQLD 2949

Query: 106  ELSKYKIKKAGA--GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
             L+ + +KK     G  H++ +T +G   ++G    G+LG G + + + P+ +  L S+ 
Sbjct: 2950 TLNMHFVKKVTVHPGGRHSLCITREGKVFSWGEGIDGKLGHGDVTSRLSPTLIEALESKL 3009

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            +   ACG+  +  +++     +   GL  YG+LGHG     +               P+ 
Sbjct: 3010 IVEIACGSSHSAAVTA--DGELYTWGLGDYGRLGHGDSKTLHI--------------PKQ 3053

Query: 223  IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            + AL    ++ +ACG+    T+A+     V++WG G +G+LG    +   +P+++D    
Sbjct: 3054 VKALQDYKVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCG 3113

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLM---DLSGWNL 333
             +V      I+ G+  S   +  G+++ WGK       +G+D  Y  P +    L    +
Sbjct: 3114 RDV----CRIACGAQFSLALSTTGKVWTWGKGDYYRLGHGNDSHYRSPQLIEGPLKKKRI 3169

Query: 334  RCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDI----LEGMHVIS 388
              +  G +H     D+    SWG   +G+ G G     ++ + K+  I    L+G+ +  
Sbjct: 3170 TEIAVGALHCLAVTDTGEVYSWGDNDHGQQGNG-----NTTVNKRPQICLGELDGVKISH 3224

Query: 389  VACGYGHSL 397
            +ACG  HS+
Sbjct: 3225 IACGSSHSI 3233



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 147/334 (44%), Gaps = 30/334 (8%)

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + Y WG N RGQLG     +   P I   ++  +      G     ++T +G   A G  
Sbjct: 3771 KFYVWGHNHRGQLGGVQGTKVKSPVINDIIAALRPTAVAGGEQTLFILTSEGKVYASGLG 3830

Query: 138  KHGQLGSGSIRNEIEP---SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
              G+LG G   N + P    P++ L  E  +   G    + L+S     + + G  + G+
Sbjct: 3831 GSGRLGIGRSDNIVTPVIIEPLQHLKIEKLSVHSGGRHAMVLTS--NFEVFSWGDGEDGK 3888

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LGHG            KL+ E    PR I AL G+ IV ++CG++H+ A+ SKG +YTWG
Sbjct: 3889 LGHGD-----------KLSSET---PRKIEALLGKQIVHISCGSSHSAAITSKGELYTWG 3934

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----- 309
             G YGRLGH +  D   P+ ++  +   V+  +    +G   +        ++ W     
Sbjct: 3935 KGRYGRLGHGDGDDCLKPKLLEALKSYKVI--DVACGSGDAQTLAITDDDCVWSWGDGDY 3992

Query: 310  GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
            GKL   G D    P  +  L G  +  ++ G+     +  +    +WG   Y  LG+G  
Sbjct: 3993 GKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQFSVALTKNGDLYTWGKGDYYRLGHGT- 4051

Query: 368  GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                   P+KV  L+G  +++VA G  H +   D
Sbjct: 4052 -NDHVRRPRKVACLQGKQIVTVAAGSLHCVACTD 4084



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/305 (27%), Positives = 138/305 (45%), Gaps = 27/305 (8%)

Query: 13  ETGKEKGGELLFCGSTCWDAV---GRRKG-ALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
           ET  E G + + C S    A+   GR    A +    +P  L  L+ + I+ +AA     
Sbjct: 464 ETVAELGIKQIMCSSDNIIALTNNGRVYSLAYNARCEAPVLLDSLIDIKIKKIAANVEGE 523

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  Y+WG  + G+LGHGD I+R+ P +V EL   KI +   G +++  VT +
Sbjct: 524 HYLALSSDGCVYSWGSGDGGRLGHGD-IRRE-PELVKELVNKKITQIACGSTYSAAVTSN 581

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
           G    +G   +G+LG G+  + + P+ V  L  S V   ACG+     L+  +   + + 
Sbjct: 582 GELYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSW 641

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTNHTVAVD 245
           G   YG+LG G                +    P+ +  L    + IV V CG+  +VA+ 
Sbjct: 642 GDGDYGKLGRG--------------GSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALG 687

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
             G V+TWG     RLGH        P+ V+     +++     I+ G  +        Q
Sbjct: 688 KDGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINYHIVD----IAVGPSHCLALTDNCQ 743

Query: 306 LYMWG 310
           ++ WG
Sbjct: 744 IFTWG 748



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/309 (25%), Positives = 134/309 (43%), Gaps = 34/309 (11%)

Query: 101  PTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
            P I+  L   KI+K    +G  H +V+T +    ++G  + G+LG G   +   P  +  
Sbjct: 3846 PVIIEPLQHLKIEKLSVHSGGRHAMVLTSNFEVFSWGDGEDGKLGHGDKLSSETPRKIEA 3905

Query: 159  LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L+  ++   +CG+  +  ++S     +   G  +YG+LGHG  ++               
Sbjct: 3906 LLGKQIVHISCGSSHSAAITS--KGELYTWGKGRYGRLGHGDGDDC-------------- 3949

Query: 218  PRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             +P+ + AL    ++ VACG+    T+A+     V++WG G YG+LG         P R+
Sbjct: 3950 LKPKLLEALKSYKVIDVACGSGDAQTLAITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRI 4009

Query: 276  DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLMDLS 329
            +      V   E     GS  S      G LY WGK     L +  +D +  P+ +  L 
Sbjct: 4010 ESLIGMAVCKVE----CGSQFSVALTKNGDLYTWGKGDYYRLGHGTNDHVRRPRKVACLQ 4065

Query: 330  GWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
            G  +  + +G++H     D+    +WG    G+LG G         P  V +LE + +  
Sbjct: 4066 GKQIVTVAAGSLHCVACTDAGEVFTWGDNDEGQLGNGTLNPIPE--PTLVTVLENVKLNR 4123

Query: 389  VACGYGHSL 397
            V CG  HS 
Sbjct: 4124 VGCGSAHSF 4132



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 96/222 (43%), Gaps = 29/222 (13%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHG                + +  P  +  L  + I ++ACG+ ++ AV S G +YT
Sbjct: 543 GRLGHG----------------DIRREPELVKELVNKKITQIACGSTYSAAVTSNGELYT 586

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--- 309
           WG G YGRLGH   +D  +P  V     ++V+  +    +G  ++      G ++ W   
Sbjct: 587 WGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVV--DVACGSGDAHTLAIDKDGIVWSWGDG 644

Query: 310 --GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCISWGHAQYGELG 363
             GKL   G D    PK +  L   N   ++      F   +G D +  +WG +    LG
Sbjct: 645 DYGKLGRGGSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGYRLG 704

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +G         PK V+ L   H++ +A G  H L + D   +
Sbjct: 705 HGTLDH--VRYPKMVEGLINYHIVDIAVGPSHCLALTDNCQI 744



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 87/224 (38%), Gaps = 63/224 (28%)

Query: 231 IVKVACGTNHTVAVDSKGY----------------------------------------- 249
           I ++ C +++ +A+ + G                                          
Sbjct: 471 IKQIMCSSDNIIALTNNGRVYSLAYNARCEAPVLLDSLIDIKIKKIAANVEGEHYLALSS 530

Query: 250 ---VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
              VY+WG G  GRLGH + + E  P  V       +      I+ GS  S+     G+L
Sbjct: 531 DGCVYSWGSGDGGRLGHGDIRRE--PELVKELVNKKI----TQIACGSTYSAAVTSNGEL 584

Query: 307 YMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHF-VGADSSCISWGHA 357
           Y WG+         N +D + P  +  LSG ++  +   SG+ H   +  D    SWG  
Sbjct: 585 YTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDVACGSGDAHTLAIDKDGIVWSWGDG 644

Query: 358 QYGELGYGPYGQKSSAMPKKVDILE--GMHVISVACGYGHSLVI 399
            YG+LG G  G     +PK V+ L+    ++++V CG   S+ +
Sbjct: 645 DYGKLGRG--GSDCCKVPKVVETLKHHNKYIVNVLCGSQFSVAL 686


>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
 gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
          Length = 748

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 166/338 (49%), Gaps = 40/338 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H VA+  +G  ++WG N  GQLG      R  P  VS L+  +   A +G+ HTV++  +
Sbjct: 359 HSVALGADGTAWSWGDNVFGQLGDTTFEPRMAPVQVSGLALGR-ADATSGQLHTVMLGAN 417

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N+ GQLG+G+ ++   P PV   +++V + A G   T  L S    ++   G
Sbjct: 418 GRLWAWGDNQQGQLGNGTQQDSSLPLPVN--LTDVISVASGYRHTAALRS--DGTVWTWG 473

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
           + ++GQLG GT  +              +P P  +  L G  +  +A G NH++A+ S G
Sbjct: 474 MNRFGQLGEGTVTD--------------RPTPVQVVGLGG--VTAIATGDNHSLALRSNG 517

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WGF  YG+LG     D   P  V     +N++     I+AG  +S      G ++ 
Sbjct: 518 TVWAWGFNRYGQLGDGTAVDRRQP--VQASGLSNIV----AIAAGGSHSLALRSDGTVWA 571

Query: 309 W-----GKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           +     G+L N    W + P   + LS  ++  + +G+++   + AD +  +WG+   G+
Sbjct: 572 FGYNFDGQLGNGTRTWTLVPVQAVGLS--SVVSLAAGSLYSLALRADGTVWAWGYNASGQ 629

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           LG G    + SA P +V  L G  + S+A G  HSL +
Sbjct: 630 LGVGT--TQGSAQPLQVPGLSG--ITSIAAGSYHSLAL 663



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 108/242 (44%), Gaps = 27/242 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+   G  + WG N  GQLG G  + R +P   S LS   I    AG SH++ +  D
Sbjct: 509 HSLALRSNGTVWAWGFNRYGQLGDGTAVDRRQPVQASGLSN--IVAIAAGGSHSLALRSD 566

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   AFG+N  GQLG+G+    + P     L S V + A G+ +++ L +    ++   G
Sbjct: 567 GTVWAFGYNFDGQLGNGTRTWTLVPVQAVGL-SSVVSLAAGSLYSLALRA--DGTVWAWG 623

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLG GT               +   +P  +  L+G  I  +A G+ H++A+ S G
Sbjct: 624 YNASGQLGVGTT--------------QGSAQPLQVPGLSG--ITSIAAGSYHSLALRSDG 667

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
           +V+ WGF   G+LG+        P  V              I AG  +S      G ++ 
Sbjct: 668 WVWAWGFNFEGQLGNGTSTPRLSPGLVAGMSN------AVAIIAGDQHSLAMKADGTVWA 721

Query: 309 WG 310
           WG
Sbjct: 722 WG 723



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 38/336 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +AV  +G  + WG N  GQLG G    +  P  V+ L++  +    AG  +++ +  D
Sbjct: 61  HSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQ--VTSVAAGDQYSLALDAD 118

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N  GQLG G++ + + P  V  L S V + A G  F   L+     ++   G
Sbjct: 119 GAVWAWGDNASGQLGDGTLTSRLLPQRVSAL-SNVVSLASG--FAHVLALRADGTVWAWG 175

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             +  QLG GT        SSV         P  +  L+G  +V V  G + ++A+ + G
Sbjct: 176 DNRNNQLGDGTLTR-----SSV---------PLQVPGLSG--VVAVVAGGSSSLALRADG 219

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            ++ WG   YG+LG     D    RR+   Q  + L     +S G+ ++      G ++ 
Sbjct: 220 TLWAWGDNRYGQLG-----DGTTVRRITPVQVAS-LDSVVSVSVGAYHALALRADGTVWA 273

Query: 309 WGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
           WG        +G +    +P + +S  ++R + +GN H   V  D +  +WG  +Y +LG
Sbjct: 274 WGHNAYGQLGDGTNTQRTQP-VSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLG 332

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            G     SS +P +  +  G   +++  GY HS+ +
Sbjct: 333 TGNL--TSSPLPLQAGMTGG---VTLVAGYRHSVAL 363



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 161/369 (43%), Gaps = 49/369 (13%)

Query: 41  DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           DG L     P ++  L GV +  VA G  S   +A+  +G  + WG N  GQLG G  ++
Sbjct: 184 DGTLTRSSVPLQVPGLSGV-VAVVAGGSSS---LALRADGTLWAWGDNRYGQLGDGTTVR 239

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V+ L        GA   H + +  DG   A+G N +GQLG G+  N     PV 
Sbjct: 240 RITPVQVASLDSVVSVSVGA--YHALALRADGTVWAWGHNAYGQLGDGT--NTQRTQPVS 295

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
             +++V     G   +  L+     ++   G  +Y QLG G                 + 
Sbjct: 296 VSLTDVRTLVAGNYHS--LAVRTDGAVWAWGDNRYRQLGTGN--------------LTSS 339

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P P       G T+V    G  H+VA+ + G  ++WG   +G+LG    +    PR   V
Sbjct: 340 PLPLQAGMTGGVTLV---AGYRHSVALGADGTAWSWGDNVFGQLGDTTFE----PRMAPV 392

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NG--DDWMYPKPLMDLSGW 331
            Q + +    A  ++G +++      G+L+ WG  +     NG   D   P P ++L+  
Sbjct: 393 -QVSGLALGRADATSGQLHTVMLGANGRLWAWGDNQQGQLGNGTQQDSSLPLP-VNLT-- 448

Query: 332 NLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
           ++  + SG  H   + +D +  +WG  ++G+LG G    +    P  V ++    V ++A
Sbjct: 449 DVISVASGYRHTAALRSDGTVWTWGMNRFGQLGEGTVTDR----PTPVQVVGLGGVTAIA 504

Query: 391 CGYGHSLVI 399
            G  HSL +
Sbjct: 505 TGDNHSLAL 513



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 131/287 (45%), Gaps = 35/287 (12%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G+ H++ V  DG   A+G+N+ GQLG G+ R++  P  V  L ++VT+ A G  +++ L 
Sbjct: 58  GQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDKASPVQVAGL-TQVTSVAAGDQYSLALD 116

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           + +GA +   G    GQLG GT                ++  P+ ++AL+   +V +A G
Sbjct: 117 A-DGA-VWAWGDNASGQLGDGT--------------LTSRLLPQRVSALS--NVVSLASG 158

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
             H +A+ + G V+ WG     +LG        VP +V        L     + AG  +S
Sbjct: 159 FAHVLALRADGTVWAWGDNRNNQLGDGTLTRSSVPLQVP------GLSGVVAVVAGGSSS 212

Query: 298 SCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
                 G L+ WG  +     +G       P+   S  ++  +  G  H   + AD +  
Sbjct: 213 LALRADGTLWAWGDNRYGQLGDGTTVRRITPVQVASLDSVVSVSVGAYHALALRADGTVW 272

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +WGH  YG+LG G   Q++   P  V + +   V ++  G  HSL +
Sbjct: 273 AWGHNAYGQLGDGTNTQRT--QPVSVSLTD---VRTLVAGNYHSLAV 314



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 21/197 (10%)

Query: 212 LAYEAQPRPRAIAALAGETI--VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           L   A PR   +   AGE +  V++A G  H++AV S G V+ WGF   G+LG    +D+
Sbjct: 31  LPGAAAPREATVRQRAGERLPPVRLALGQYHSLAVHSDGTVFAWGFNRLGQLGDGTSRDK 90

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPK 323
             P +V        L     ++AG   S      G ++ WG   +   GD      + P+
Sbjct: 91  ASPVQV------AGLTQVTSVAAGDQYSLALDADGAVWAWGDNASGQLGDGTLTSRLLPQ 144

Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            +  LS  N+  + SG  H   + AD +  +WG  +  +LG G      S++P +V  L 
Sbjct: 145 RVSALS--NVVSLASGFAHVLALRADGTVWAWGDNRNNQLGDGTL--TRSSVPLQVPGLS 200

Query: 383 GMHVISVACGYGHSLVI 399
           G  V++V  G   SL +
Sbjct: 201 G--VVAVVAGGSSSLAL 215


>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
           carolinensis]
          Length = 530

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 144/296 (48%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G      + + + P +L  L G  IR ++ G    H V    +G  Y
Sbjct: 41  EVFVFGLNCSNCLGTGD---NQSTIVPKKLESLSGKRIRSLSYGS-GPHVVLSTEDGEVY 96

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P  + + L   K+ +   G  H++ ++ DG+  A+G+N  
Sbjct: 97  AWGHNGYSQLGNGTTNQGVTPIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNC 156

Query: 140 GQLGSGSIRNEIEPSPV-RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++ V + ACG   +V +  V+   +   G    GQLG 
Sbjct: 157 GQVGSGSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAI--VDNGEVYGWGYNGNGQLGL 214

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +                Q  P  +AAL G  I+++ACG  HT+A+  +G +Y+WG   
Sbjct: 215 GNNGN--------------QLTPCRVAALQGVCIMQIACGYAHTLALTDEGLMYSWGANT 260

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + ++  P ++ + ++  V+   A  SA +  S+     G +YMWG+ +
Sbjct: 261 YGQLGTGNKSNQLSPGQI-LMEKERVVEIAACHSAHT--SAAKTQSGLVYMWGQCR 313



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 140/310 (45%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + +T +     FG N    LG+G  ++ I P  +  
Sbjct: 10  TLLSPQEIATIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLES 69

Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L  + + + + G+   V LS+ +G  +   G   Y QLG+GT N+  T            
Sbjct: 70  LSGKRIRSLSYGSGPHVVLSTEDG-EVYAWGHNGYSQLGNGTTNQGVTP----------- 117

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+ S G VY WG+   G++G     ++  PR+V  
Sbjct: 118 --IQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNCGQVGSGSTANQPTPRKV-- 173

Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
              +N L  + V+S   G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 174 ---SNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 229

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + SWG   YG+LG    G KS+ +     ++E   V+
Sbjct: 230 QGVCIMQIACGYAHTLALTDEGLMYSWGANTYGQLG---TGNKSNQLSPGQILMEKERVV 286

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 287 EIAACHSAHT 296



 Score = 41.2 bits (95), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 75/189 (39%), Gaps = 54/189 (28%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ + +L+G+ I  ++ G+  H V     G VY WG  GY +LG+        P +V   
Sbjct: 64  PKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVYAWGHNGYSQLGNGTTNQGVTPIQV--- 120

Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
              N+L  + + ++ GS +S   +  G +Y                              
Sbjct: 121 -CTNLLIKKVIEVACGSHHSLALSSDGDVY------------------------------ 149

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
                          +WG+   G++G G    + +  P+KV + L+   V+S+ACG   S
Sbjct: 150 ---------------AWGYNNCGQVGSGSTANQPT--PRKVSNCLQTKIVVSIACGQTSS 192

Query: 397 LVIVDRTNV 405
           + IVD   V
Sbjct: 193 VAIVDNGEV 201


>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 862

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 107/356 (30%), Positives = 162/356 (45%), Gaps = 34/356 (9%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P ++  L GV    +AAG    H  AV  +G  + WG N+ GQLG G +  R  P  + 
Sbjct: 99  TPVQVPGLTGVTA--IAAG--RRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLP 154

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
           EL+   +    AGR HT  V +DG   A+G N  GQLG G+  N + P  V  L + VTA
Sbjct: 155 ELTG--VTAIAAGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGL-TGVTA 211

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G   T  L+  +  ++   G    GQLG GT              Y  +  P  +  
Sbjct: 212 IAAGDYHT--LAVRQDGTVWAWGNNALGQLGDGT--------------YTERLTPVQVPG 255

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G  +  ++ G +HTVAV   G V+ WG   +G+LG   + D   P +V        + 
Sbjct: 256 LTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQLGDGTRTDRLTPVQVPGLSGVTAI- 312

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
            E      +V    T     L  WG+L +    D + P  + DL+  ++  + +G+ H  
Sbjct: 313 AEGRRHTFAVRQDGTVWAWGLNFWGQLGDGTRSDRLTPVQVPDLT--SVTAIAAGDYHTL 370

Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            V  D +  +WG   +G+LG G Y  + +  P +V  L G  V ++A G  H++ +
Sbjct: 371 AVRQDGTVWAWGDNVWGQLGDGTYTDRLT--PVQVPGLTG--VTAIAAGESHTVAM 422



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 167/371 (45%), Gaps = 59/371 (15%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P ++  L GV    +AAG    H VA+  +G  + WG N  GQLG G    R  P  V
Sbjct: 398 LTPVQVPGLTGVTA--IAAG--ESHTVAMRQDGTVWAWGDNVWGQLGDGTYTDRLTPVQV 453

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL----V 160
            +L+   +    AG  HT+ V +DG   A+G+N +GQLG G+  +   PSPV       V
Sbjct: 454 PDLTS--VTAIAAGDYHTLAVRQDGTVCAWGFNAYGQLGDGT--SSRSPSPVMVPGLTGV 509

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           +   A A G   TV  + ++  ++   GL   GQLG G      T D  +         P
Sbjct: 510 TVFAALAAGDSHTV--AVMQDGTVWAWGLNASGQLGDGA-----TIDRRI---------P 553

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
             I  LAG  +  +A G+ HT+A    G V++WG   YG+LG         P +V     
Sbjct: 554 VQIPGLAG--VTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVP---- 607

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW-----------MYPKPLMDLS 329
              L   + ++AG  +S      G +  WG+     + W           + P  +  L+
Sbjct: 608 --GLTGVSAMAAGDAHSVALLQDGTVSAWGR-----NSWGQLGDGTTAARLTPVQVHGLT 660

Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
           G  +  + +G++H   +  D +  +WG+   G+LG G   ++ +  P +V  L    V +
Sbjct: 661 G--VTAVAAGSLHTVALRQDGTVWAWGYNDLGQLGDGTTTRRLA--PVQVQGL--TDVTA 714

Query: 389 VACGYGHSLVI 399
           +A GY H++ +
Sbjct: 715 IAAGYFHTVAV 725



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 147/338 (43%), Gaps = 40/338 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H VAV  +G  + WG N  GQLG G +  R  P  V  L+   +    AGR HT  V +D
Sbjct: 18  HTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGLTG--VTAVAAGRHHTFAVRQD 75

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N  GQLG G+      P  V  L + VTA A G   T  +S  +  ++   G
Sbjct: 76  GTVWAWGLNVWGQLGDGTHTERHTPVQVPGL-TGVTAIAAGRRHTFAVS--QDGTVWAWG 132

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              +GQLG GT  + +T              P  +  L G  +  +A G  HT AV   G
Sbjct: 133 DNDWGQLGDGTRADRHT--------------PVQLPELTG--VTAIAAGRRHTFAVRQDG 176

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG   +G+LG   + +   P +V        L     I+AG  ++      G ++ 
Sbjct: 177 TVWAWGDNAWGQLGDGTRTNRLTPVQVP------GLTGVTAIAAGDYHTLAVRQDGTVWA 230

Query: 309 WGK--LKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           WG   L   GD    + + P  +  L+G  +  + +G  H   V  D +  +WG   +G+
Sbjct: 231 WGNNALGQLGDGTYTERLTPVQVPGLTG--VTAISAGESHTVAVRQDGTVWAWGDNVWGQ 288

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           LG G   +     P +V  L G  V ++A G  H+  +
Sbjct: 289 LGDGT--RTDRLTPVQVPGLSG--VTAIAEGRRHTFAV 322



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 98/342 (28%), Positives = 153/342 (44%), Gaps = 44/342 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L GV    +AAG  S H +A   +G  ++WG N  GQLG G    R  P  V  
Sbjct: 553 PVQIPGLAGVTA--IAAG--SAHTLAAGQDGAVWSWGANSYGQLGDGTTTHRLSPVQVPG 608

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L+   +    AG +H+V + +DG   A+G N  GQLG G+    + P  V  L + VTA 
Sbjct: 609 LTG--VSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTTAARLTPVQVHGL-TGVTAV 665

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  TV L   +  ++   G    GQLG GT        ++ +LA      P  +  L
Sbjct: 666 AAGSLHTVALR--QDGTVWAWGYNDLGQLGDGT--------TTRRLA------PVQVQGL 709

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               +  +A G  HTVAV   G V+ WG+  +G+LG         P +V        L  
Sbjct: 710 --TDVTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQV------QELTG 761

Query: 287 EAVISAGSVNSSCTAGGGQLYMWG-----KLKN-NGDDWMYPKPLMDLSGWNLRCMDSGN 340
            + ++AG  ++      G ++ WG     +L N +  D   P  +  L+G  +  + +G 
Sbjct: 762 VSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGLTG--VSALTAGR 819

Query: 341 MHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
            H   V  +    +WG   +G++G G    +    P+ VD++
Sbjct: 820 FHTAAVSPEGFGWAWGRNNFGQVGDGTTADR----PRPVDVV 857



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 132/295 (44%), Gaps = 38/295 (12%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
           +    AG  HTV V +DG + A+G N  GQLG G+  + + P  V  L + VTA A G  
Sbjct: 9   VTATTAGEYHTVAVRQDGTAWAWGNNAWGQLGDGTRTDRLTPVQVPGL-TGVTAVAAGRH 67

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            T   +  +  ++   GL  +GQLG GT  E +T              P  +  L G  +
Sbjct: 68  HT--FAVRQDGTVWAWGLNVWGQLGDGTHTERHT--------------PVQVPGLTG--V 109

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
             +A G  HT AV   G V+ WG   +G+LG   + D   P ++        L     I+
Sbjct: 110 TAIAAGRRHTFAVSQDGTVWAWGDNDWGQLGDGTRADRHTPVQLP------ELTGVTAIA 163

Query: 292 AGSVNSSCTAGGGQLYMWGK--LKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
           AG  ++      G ++ WG       GD    + + P  +  L+G  +  + +G+ H   
Sbjct: 164 AGRRHTFAVRQDGTVWAWGDNAWGQLGDGTRTNRLTPVQVPGLTG--VTAIAAGDYHTLA 221

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           V  D +  +WG+   G+LG G Y ++ +  P +V  L G+  IS   G  H++ +
Sbjct: 222 VRQDGTVWAWGNNALGQLGDGTYTERLT--PVQVPGLTGVTAIS--AGESHTVAV 272



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 64/123 (52%), Gaps = 8/123 (6%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P +++ L   D+  +AAG    H VAV  +G  + WG N  GQLG G    R  P  V
Sbjct: 701 LAPVQVQGLT--DVTAIAAGY--FHTVAVRQDGTVWAWGYNLWGQLGDGSSTARSTPVQV 756

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSE 162
            EL+   +    AG +HTV V +DG   A+G N   QLG+GS  +   P  V  L  VS 
Sbjct: 757 QELT--GVSALAAGYAHTVAVKQDGTVWAWGNNSGTQLGNGSSTDRYTPVWVEGLTGVSA 814

Query: 163 VTA 165
           +TA
Sbjct: 815 LTA 817



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 28  TCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDVEGRCYTWGRNE 86
           T W A G   G   GN  S  R  P+    +  V+A      H  AV  EG  + WGRN 
Sbjct: 780 TVW-AWGNNSGTQLGNGSSTDRYTPVWVEGLTGVSALTAGRFHTAAVSPEGFGWAWGRNN 838

Query: 87  RGQLGHGDKIQRDRPTIV 104
            GQ+G G    R RP  V
Sbjct: 839 FGQVGDGTTADRPRPVDV 856


>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
 gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
          Length = 1466

 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 114/364 (31%), Positives = 165/364 (45%), Gaps = 46/364 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P RL  L   +I  V +G    H +A+  +G  +TWG N  GQLG G    R  P  V
Sbjct: 100 LAPVRLAALE--NIVSVVSG--DAHSLALGADGSVWTWGGNSSGQLGDGTTTDRATPMRV 155

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           + L    +    AG  H++ + EDG   A+G N HGQLG G  +  + P  V  L + V 
Sbjct: 156 AGLDS--VVAVAAGDFHSLALREDGTVWAWGTNFHGQLGRGHTQPGLTPEQVPGL-NGVV 212

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G DFT  L+ +E  ++   G    GQLG GT  +              +  P  ++
Sbjct: 213 ALAAGFDFT--LAVLEDGTVRAWGSNGSGQLGDGTSTQ--------------RLSPVKVS 256

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L+G  I +V  GT H +A+   G V+TWG    G+LG     D  VP +V   +R   +
Sbjct: 257 ELSG--ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDRAVPMQVPGLERVKAV 314

Query: 285 PPE-----AVISAGSVNSSCTAGGGQLYMWGKLKNNGD--DWMYPKPLMDLSGWNLRCMD 337
                   A++  G+V +    G GQL        +GD  D   P P+  L+   +  + 
Sbjct: 315 ASMDSDSLALLDTGAVFAWGANGSGQL-------GDGDTTDRATPGPVPGLNA--VASVV 365

Query: 338 SGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            G  H  V   D +  +WG    G+LG+G  G +   +P  V  L G  V S+A G  HS
Sbjct: 366 GGAQHALVLRKDGTLWAWGGGLSGQLGHG--GSERHVVPAPVMRLAG--VTSMATGSFHS 421

Query: 397 LVIV 400
           L  +
Sbjct: 422 LAAL 425



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 162/349 (46%), Gaps = 42/349 (12%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R VA+   + H +AV ++G  + WGRN  GQLG G  + R RP  V  L+   +    A
Sbjct: 461 VRSVAS--AAHHSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLT--SVTAVAA 516

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G SH + +  DG+  A+G+N  GQLG G+  + + P  V  L   V A A G+ F++ L 
Sbjct: 517 GGSHVLALRSDGSVWAWGYNALGQLGDGTTVDRLTPVRVSGL-GAVVAVAAGSYFSMALQ 575

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           S    ++   G    GQLG G   +              +  P  +  LA   I +VA G
Sbjct: 576 S--DGTVWTWGEGFEGQLGDGGGVQ--------------RLSPVRVEGLA--NITRVAAG 617

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
           + H +AV   G V+ WG  G G+LG     D + P +V   Q          +S G  +S
Sbjct: 618 SAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGLQGIT------AVSGGRSHS 671

Query: 298 SCTAGGGQLYMWG--KLKNNGDDWMY----PKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
               G G +  WG       GD  +     P  +  L+G  ++ +   ++H   + AD +
Sbjct: 672 MALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTG--IQALHPSHLHVLALHADGT 729

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              WG+ ++G+LG G  G   SA+P +V  +  +  +SV  G  H+L++
Sbjct: 730 LRGWGYNRFGQLGLGAAGW--SAVPVQVRGIGRVDRLSV--GRAHTLMV 774



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 141/331 (42%), Gaps = 44/331 (13%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           S H +A   +G  + WGRN  GQLG G   +R     V  L    ++   +   H++ V 
Sbjct: 418 SFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHAAVRVEGLGG--VRSVASAAHHSLAVG 475

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            DG   A+G N  GQLG G+  +   P  V  L S VTA A G    + L S    S+  
Sbjct: 476 MDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLTS-VTAVAAGGSHVLALRS--DGSVWA 532

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G    GQLG GT  +  T              P  ++ L    +V VA G+  ++A+ S
Sbjct: 533 WGYNALGQLGDGTTVDRLT--------------PVRVSGLG--AVVAVAAGSYFSMALQS 576

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G V+TWG G  G+LG         P RV+     N+      ++AGS ++    G G +
Sbjct: 577 DGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGLA--NI----TRVAAGSAHALAVRGDGTV 630

Query: 307 YMWGKLKNNGD---------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
           + WG   +NG+         D   P  +  L G  +  +  G  H   +  D +  +WG+
Sbjct: 631 WAWG---DNGEGQLGDGSWADRFRPVQVPGLQG--ITAVSGGRSHSMALQGDGTVRAWGY 685

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
             YG+LG G     S   P  +  L G+  +
Sbjct: 686 NGYGQLGDGTL--TSRVRPALIPGLTGIQAL 714



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 142/328 (43%), Gaps = 36/328 (10%)

Query: 60   FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
             VA    + H +A+  +G  + WG N  GQLG G    R RP  V+ L    +   G+G 
Sbjct: 1167 VVAVSSGAWHSLALLSDGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLGD--VVAIGSGG 1224

Query: 120  SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
             H + V  DG+   +G+N  GQLG G+  +   P+ V  L   V A A G  +++ L S 
Sbjct: 1225 YHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGL-EGVVAVAGGDHYSLALHS- 1282

Query: 180  EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               ++   G    GQLG GT     ++ +   +      R                 G  
Sbjct: 1283 -DGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVR----------------AGAT 1325

Query: 240  HTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            HTVA+   G V+TWG   +G+LG      +   VPR V        L   + + AG+ ++
Sbjct: 1326 HTVALRGDGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPN------LSSVSAVGAGARHT 1379

Query: 298  SCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCI 352
               A  G ++ WG+  +     GD+    +PL      ++  +  G +    +  D + +
Sbjct: 1380 FAVALKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSDVTVVSGGADFSLAMKRDGTVL 1439

Query: 353  SWGHAQYGELGYGPYGQKSSAMPKKVDI 380
            SWG + YG LG G  G +SS  P +V +
Sbjct: 1440 SWGSSLYGSLGLGATGHRSS--PGQVAL 1465



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 158/369 (42%), Gaps = 58/369 (15%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           +SP R+  L   +I  VAAG  S H +AV  +G  + WG N  GQLG G    R RP  V
Sbjct: 600 LSPVRVEGLA--NITRVAAG--SAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQV 655

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---- 160
             L    I     GRSH++ +  DG   A+G+N +GQLG G++ + + P+ +  L     
Sbjct: 656 PGLQG--ITAVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALIPGLTGIQA 713

Query: 161 ---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
              S +   A  AD T          +   G  ++GQLG G               + A 
Sbjct: 714 LHPSHLHVLALHADGT----------LRGWGYNRFGQLGLG------------AAGWSAV 751

Query: 218 P-RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           P + R I       + +++ G  HT+ V + G V  WG  G G+LG         P  V 
Sbjct: 752 PVQVRGIG-----RVDRLSVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVP 806

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPKPLMDLSGWNLR 334
                  +P    +++G  +S   A  G ++ WG       GD    P+    L    LR
Sbjct: 807 ------GVPCVRSVASGIQHSLALACDGTVWAWGANARGQLGDGTTTPRVTPGLVE-GLR 859

Query: 335 CMDS----GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            + +    G+    + AD S  SWG    G+LG G    +  A+P  V+ L   + ++VA
Sbjct: 860 GVVALAAGGDASVALRADGSVWSWGGNASGQLGDGTLTDR--ALPAHVEHLS--NAVAVA 915

Query: 391 CGYGHSLVI 399
            G  H+L +
Sbjct: 916 VGETHALAV 924



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 141/344 (40%), Gaps = 30/344 (8%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
            VA      H +AV  +G  + WG N  GQLG G       P  V  L +  +    AGR+
Sbjct: 912  VAVAVGETHALAVGEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLER--VASVAAGRA 969

Query: 121  HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
             +V V +DG + A+G N  GQLG G+      P+ V  L   + A + GA   V LS+  
Sbjct: 970  FSVAVRDDGTAWAWGTNPSGQLGDGTNHARSVPNQVTSL-KGIRAMSAGAHHVVALSA-- 1026

Query: 181  GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              ++   G    GQLG G+ +                  PR +  L G  +  VA G   
Sbjct: 1027 DGTVWTWGDNTLGQLGDGSSSPTGMW-------------PRQVPELRG--VEAVAAGEQF 1071

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            TVAV   G    WG   YG+LG  +   +  P  V + +   + PP   + A   ++   
Sbjct: 1072 TVAVLLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKI-EGPKIRPPVRTVRAWGQHAVVQ 1130

Query: 301  AGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
               G +  WG        +G       PL      ++  + SG  H   + +D +  +WG
Sbjct: 1131 MSDGTVQTWGDNTFGQLGDGTTTRRAVPLTVYGLASVVAVSSGAWHSLALLSDGTVWAWG 1190

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               +G+LG G     S+   + V +     V+++  G  H+L +
Sbjct: 1191 ANGFGQLGDG----TSTPRTRPVQVAGLGDVVAIGSGGYHALAV 1230



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 155/393 (39%), Gaps = 38/393 (9%)

Query: 23   LFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYT 81
            L    T W       G L     SPT + P    ++R V A        VAV ++G    
Sbjct: 1024 LSADGTVWTWGDNTLGQLGDGSSSPTGMWPRQVPELRGVEAVAAGEQFTVAVLLDGTARA 1083

Query: 82   WGRNERGQLGHGDKIQRDRPTIVS-ELSKYK--IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            WG NE GQLG G    +  P  V  E  K +  ++   A   H VV   DG    +G N 
Sbjct: 1084 WGSNEYGQLGDGKTGPQLTPMAVKIEGPKIRPPVRTVRAWGQHAVVQMSDGTVQTWGDNT 1143

Query: 139  HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             GQLG G+      P  V  L S V A + GA  +  L+ +   ++   G   +GQLG G
Sbjct: 1144 FGQLGDGTTTRRAVPLTVYGLAS-VVAVSSGAWHS--LALLSDGTVWAWGANGFGQLGDG 1200

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
            T                  PR R +       +V +  G  H +AV S G V+TWG+  +
Sbjct: 1201 TST----------------PRTRPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAF 1244

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLK 313
            G+LG    +   +P RV+  +          ++ G   S      G L  WG     +L 
Sbjct: 1245 GQLGDGTAESRSLPTRVEGLEG------VVAVAGGDHYSLALHSDGTLSAWGNNASGQLG 1298

Query: 314  NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
            +      Y + +       +  + +G  H   +  D +  +WG   +G+LG G  G +  
Sbjct: 1299 DGTGTTRYSR-VAVKGVDGVVDVRAGATHTVALRGDGTVWTWGDNAFGQLGDGASGTRMR 1357

Query: 373  AMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ V  L    V +V  G  H+  +  +  V
Sbjct: 1358 LVPRPVPNLS--SVSAVGAGARHTFAVALKGTV 1388



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 100/361 (27%), Positives = 154/361 (42%), Gaps = 42/361 (11%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P R+  L  V    VA    S   +A+  +G  +TWG    GQLG G  +QR  P  V
Sbjct: 550 LTPVRVSGLGAV----VAVAAGSYFSMALQSDGTVWTWGEGFEGQLGDGGGVQRLSPVRV 605

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L+   I +  AG +H + V  DG   A+G N  GQLG GS  +   P  V  L   +T
Sbjct: 606 EGLA--NITRVAAGSAHALAVRGDGTVWAWGDNGEGQLGDGSWADRFRPVQVPGL-QGIT 662

Query: 165 ATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           A + G   ++   +++G   + A G   YGQLG GT                ++ RP  I
Sbjct: 663 AVSGGRSHSM---ALQGDGTVRAWGYNGYGQLGDGT--------------LTSRVRPALI 705

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L G  I  +     H +A+ + G +  WG+  +G+LG        VP +V    R + 
Sbjct: 706 PGLTG--IQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDR 763

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRCMDSG 339
           L      S G  ++      G +  WG+  +    +G       P+       +R + SG
Sbjct: 764 L------SVGRAHTLMVRADGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVPCVRSVASG 817

Query: 340 NMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H    A D +  +WG    G+LG G    + +  P  V+ L G  V+++A G   S+ 
Sbjct: 818 IQHSLALACDGTVWAWGANARGQLGDGTTTPRVT--PGLVEGLRG--VVALAAGGDASVA 873

Query: 399 I 399
           +
Sbjct: 874 L 874



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 134/326 (41%), Gaps = 62/326 (19%)

Query: 92  HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
           H  + QR    +V      +I    AG  H++ ++  G+  A  W  +G    G     +
Sbjct: 47  HATRTQR----VVVTAPPMRIA---AGTQHSLYLSPGGDVWA--WGGNGSGQLGGAETSL 97

Query: 152 EP-SPVRC-----LVSEVT----ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           +  +PVR      +VS V+    + A GAD +VW            G    GQLG GT  
Sbjct: 98  QGLAPVRLAALENIVSVVSGDAHSLALGADGSVW----------TWGGNSSGQLGDGTTT 147

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
           +  T              P  +A L  +++V VA G  H++A+   G V+ WG   +G+L
Sbjct: 148 DRAT--------------PMRVAGL--DSVVAVAAGDFHSLALREDGTVWAWGTNFHGQL 191

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPE-----AVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
           G    +    P +V        L        AV+  G+V +  + G GQL          
Sbjct: 192 GRGHTQPGLTPEQVPGLNGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLG-----DGTS 246

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
              + P  + +LSG  +  + +G  H   +G D    +WG    G+LG G +  +  A+P
Sbjct: 247 TQRLSPVKVSELSG--ITEVRAGTYHALALGKDGGVWTWGSNASGQLGDGTWNDR--AVP 302

Query: 376 KKVDILEGMHVISVACGYGHSLVIVD 401
            +V  LE   V +VA     SL ++D
Sbjct: 303 MQVPGLE--RVKAVASMDSDSLALLD 326


>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 527

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 129/274 (47%), Gaps = 27/274 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P R+  L G  I  ++ G    H      +G  ++WG N   QLG+G       P +V
Sbjct: 63  IEPRRIDALCGKKIVSLSYG-TGPHVAIATADGEVFSWGHNGYSQLGNGTTNHGLTPALV 121

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
           S  L   ++ +   G  HT+ +T DG   A+G+N  GQ+GSGS  N+  P+P R   CL 
Sbjct: 122 STNLLGKRVIEVACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQ--PTPRRVSSCLQ 179

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
           ++ V   ACG      ++ ++   I   G    GQLG G +                Q  
Sbjct: 180 NKAVVNIACGQ--LCSMAVLDSGEIYGWGYNCNGQLGLGNNGN--------------QQT 223

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  IAAL G ++++VACG  HT+A+  +G+VY WG   YG+LG   + ++ +P  ++  +
Sbjct: 224 PCRIAALQGVSVIQVACGYAHTLALTDEGFVYAWGANSYGQLGTGNKCNQALPTLINTDK 283

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
                  E      S  S+     GQ+ MWG+ +
Sbjct: 284 ERMA---EVAACHTSHTSAAKTQSGQVLMWGQCR 314



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 130/289 (44%), Gaps = 67/289 (23%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  + VT +    A G N  G LG G +++ IEP  +  L   ++ + + G    V
Sbjct: 28  GSAANEAIYVTVNDEVFALGTNCSGCLGLGDLQSTIEPRRIDALCGKKIVSLSYGTGPHV 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            +++ +G  + + G   Y QLG+GT N   T              P  ++  L G+ +++
Sbjct: 88  AIATADG-EVFSWGHNGYSQLGNGTTNHGLT--------------PALVSTNLLGKRVIE 132

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VACG++HT+A+ + G V+ WG+   G++G     ++  PRRV    +N  +         
Sbjct: 133 VACGSHHTIALTTDGEVFAWGYNNSGQVGSGSTANQPTPRRVSSCLQNKAV--------- 183

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
            VN +C    GQL                         ++  +DSG ++           
Sbjct: 184 -VNIAC----GQL------------------------CSMAVLDSGEIY----------G 204

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           WG+   G+LG G  G + +  P ++  L+G+ VI VACGY H+L + D 
Sbjct: 205 WGYNCNGQLGLGNNGNQQT--PCRIAALQGVSVIQVACGYAHTLALTDE 251


>gi|170060307|ref|XP_001865743.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
 gi|167878807|gb|EDS42190.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
          Length = 1063

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 159/333 (47%), Gaps = 33/333 (9%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    G+LG G  ++ Q   P  +       +++A  G SHT+++T+DG     G N
Sbjct: 4   YCWGSTVHGELGLGGIEEEQVMTPREMDWSQAANVQQAACGGSHTLLLTKDGKLYTCGNN 63

Query: 138 KHGQLG--SGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            HGQLG  + ++ N+  P  +  L +  VT  +CG   ++ L++     + + G    GQ
Sbjct: 64  DHGQLGHDTNNLPNK-RPQFISALENYIVTQVSCGLSHSLALTN--WGQLFSWGSNATGQ 120

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGH  D           ++Y   P PR I ++A +T+V+++CG +H +A+ + G ++ WG
Sbjct: 121 LGHDLD----------MVSY---PAPRMIKSIATKTVVQISCGHSHCLALTNSGELFAWG 167

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
              YG+LG      + VP    V     +  P A I+ G  +S   +  G ++ WGK   
Sbjct: 168 ANEYGQLGLGTTGKK-VPTATLVKSLAGI--PIAFIACGGNHSFAVSKSGAIFGWGKNTF 224

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
                N+ D   YP  L  L    +R +  G +   F+  +    + G   +G+LG+G +
Sbjct: 225 GQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGTFGQLGHGTH 284

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G +   +P+ V  L G  +  +ACG  H+L  V
Sbjct: 285 GNE--ILPRMVFELMGSKITQIACGRKHTLAFV 315



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 94/194 (48%), Gaps = 19/194 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
           V   C   HC+A+   G  + WG NE GQLG G   ++    T+V  L+   I     G 
Sbjct: 145 VQISCGHSHCLALTNSGELFAWGANEYGQLGLGTTGKKVPTATLVKSLAGIPIAFIACGG 204

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H+  V++ G    +G N  GQLG   + +   P+ ++ L S  V   +CG DF+V+L+ 
Sbjct: 205 NHSFAVSKSGAIFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQ 264

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
             G  +   GL  +GQLGHGT                 +  PR +  L G  I ++ACG 
Sbjct: 265 EGG--VFTCGLGTFGQLGHGTHGN--------------EILPRMVFELMGSKITQIACGR 308

Query: 239 NHTVA-VDSKGYVY 251
            HT+A V S+G VY
Sbjct: 309 KHTLAFVPSRGKVY 322



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 74/157 (47%), Gaps = 5/157 (3%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            GEL   G+  +  +G   G     + + T ++ L G+ I F+A G    H  AV   G 
Sbjct: 160 SGELFAWGANEYGQLGL--GTTGKKVPTATLVKSLAGIPIAFIACG--GNHSFAVSKSGA 215

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            + WG+N  GQLG  D   R  PT +  L    ++    G   +V +T++G     G   
Sbjct: 216 IFGWGKNTFGQLGLNDLDSRCYPTQLKTLRSLGVRYISCGDDFSVFLTQEGGVFTCGLGT 275

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
            GQLG G+  NEI P  V  L+ S++T  ACG   T+
Sbjct: 276 FGQLGHGTHGNEILPRMVFELMGSKITQIACGRKHTL 312


>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii GT1]
          Length = 1205

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 41/346 (11%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTV 123
           C   H +A+   G  + WG N+ GQLG G+ ++ D+   V  E     I++   G  H +
Sbjct: 507 CGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCL 566

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
            V + G+  A+G N +GQLG G +R   EP+ V  L   V    CG D++  ++S+ GA 
Sbjct: 567 AVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVD-VFCGDDYSACITSLGGAQ 625

Query: 184 ILNA------------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            ++             G  + G+LG G D    +  +  K+ +       ++ +L  +  
Sbjct: 626 SVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAY 685

Query: 232 VKVAC--------GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            +V C        GT+H++A+ ++G  Y WG G YGRLG     + + P R D       
Sbjct: 686 KRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDF------ 739

Query: 284 LPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN--NGDDWMYPKPLMDLSGW----NL 333
             P+ V    ++AG+ +S   +  G L+ WG+ ++  +  ++M P+  M L G      +
Sbjct: 740 --PKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKV 797

Query: 334 RCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           + + +   H     ++    +WG  +  + G G    +    P++V
Sbjct: 798 KSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERV 843



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 160/428 (37%), Gaps = 94/428 (21%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV-- 104
           P+R+R      I  ++  C + H +A+  EG  Y WG    G LG GD      P  V  
Sbjct: 172 PSRVRFRDKCKIARIS--CGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 105 -SELSKYKIKK----------------AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
            SE    K K+                  AG  H++  T DG    +G   +G+LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 148 RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           R  + P+ V  ++          D        +G  +   G   +G+LGHG   E     
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGV-LYTWGSGGFGRLGHGDQGEI---- 344

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
                     P PR +    G  +++VACGT HT+A+  KG V+ WG G    LG  E +
Sbjct: 345 ----------PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG--LALGFGEGE 392

Query: 268 D-----EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD- 317
           D       VP+ +     +++      I+AG  +S+    GG L +WG        +GD 
Sbjct: 393 DGSGGMVAVPKHL-----SDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447

Query: 318 -DWMYPKPLMDL--------------------------------------SGWNLRCMDS 338
            +  +PK + DL                                      S W L+ ++ 
Sbjct: 448 QNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLEC 507

Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G  H      +  +  WG    G+LG G   ++    P K++      +  +ACG  H L
Sbjct: 508 GESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCL 566

Query: 398 VIVDRTNV 405
            +    +V
Sbjct: 567 AVAQYGDV 574



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 137/361 (37%), Gaps = 72/361 (19%)

Query: 77  GRCYTWGRNERGQLGH----------------GDKIQRD-------RPTIVSELSKYKIK 113
           G+ YT+G   RG+LG+                GD  Q D       +P+ V    K KI 
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDG-QEDGPSWFTPKPSRVRFRDKCKIA 184

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV----------------- 156
           +   G  HT+ ++++G   A+G   +G LG G   +   P  V                 
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGV 244

Query: 157 -RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
            +     V  T C A     ++     ++   G    G+LG G +               
Sbjct: 245 GKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN--------------R 290

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               P  +  +    IV V  G +H+  +D +G +YTWG GG+GRLGH +Q +  VPR+V
Sbjct: 291 GSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKV 350

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLM 326
           + F    VL     ++ G+ ++      G ++ WG             +G     PK L 
Sbjct: 351 EGFGGVPVLQ----VACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLS 406

Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMH 385
           D+    L           V      + WG      LG+G   Q++   PK V D+   M+
Sbjct: 407 DIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD--QQNQPFPKYVADLRNRMY 464

Query: 386 V 386
           V
Sbjct: 465 V 465



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 43/311 (13%)

Query: 33  VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           +G  +G+L     SP  +  ++  DI FV AG    H   +D +G  YTWG    G+LGH
Sbjct: 286 LGHNRGSL-----SPAVVDYILDRDIVFVNAG--DSHSACIDRQGVLYTWGSGGFGRLGH 338

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN-----KHGQLGSGSI 147
           GD+ +   P  V       + +   G  HT+ +T  G   A+G         G+ GSG +
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM 398

Query: 148 ------RNEIEPSPVRCLVSEV--TATACGADFTVWLSSVEGASILNAGLPQ---YGQLG 196
                  ++IE + +          A   G D  VW   V G+S L  G  Q   + +  
Sbjct: 399 VAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVW--GVGGSSRLGHGDQQNQPFPKYV 456

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRA------IAALAGE-----TIVKVACGTNHTVAVD 245
               N     D    L      R  +      +   +G      T+  + CG +HT+A+ 
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516

Query: 246 SKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             G V+ WG    G+LG  E  ++D++ P +++ F       P   I+ GS +    A  
Sbjct: 517 GAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFST-----PIRRIACGSKHCLAVAQY 571

Query: 304 GQLYMWGKLKN 314
           G ++ WG   N
Sbjct: 572 GDVFAWGANDN 582



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 139/386 (36%), Gaps = 103/386 (26%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL--------------------- 107
           H  AV V G    WG     +LGHGD+  +  P  V++L                     
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480

Query: 108 -----------------SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI--R 148
                            S + ++    G SHT+ +T  G    +G N  GQLG G     
Sbjct: 481 YSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEE 540

Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
           ++ EP  + C  + +   ACG+     L+  +   +   G    GQLG G          
Sbjct: 541 DQYEPVKLECFSTPIRRIACGSKHC--LAVAQYGDVFAWGANDNGQLGLGV--------- 589

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG--------------YVYTWG 254
            V+ ++E    P A+ AL     V V CG +++  + S G               ++ WG
Sbjct: 590 -VRPSFE----PAAVTAL--RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWG 642

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
               G+LG  E          DV   + + P + V S      S  +   Q Y       
Sbjct: 643 AAESGKLGLGE----------DVASGSILTPQKVVFSVPVCACSLDSLEMQAY------- 685

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
                   K +  +S      + SG  H   + A   C +WG   YG LG G     ++ 
Sbjct: 686 --------KRVFCVS---FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGT--TANAY 732

Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
            P + D  +G+ + SVA G  HSL +
Sbjct: 733 TPTRCDFPKGVRLRSVAAGACHSLAL 758



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H +A+  +G CY WG    G+LG G       PT        +++   AG  H++ ++
Sbjct: 700 TSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALS 759

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            DG+   +G            R E   S    +   +     G      + S+  +   +
Sbjct: 760 MDGDLWFWG------------RREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHS 807

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
             + + G++    DN+        + A E   RP  +A L       VA G   +  + +
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTGCGKRQA-ERLDRPERVAGLP-SACQWVATGPQGSFFILA 865

Query: 247 KGYVYTWGFGGYGRLG 262
            G V+  G    GRLG
Sbjct: 866 SGEVFAAGVIKSGRLG 881


>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 4048

 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 118/245 (48%), Gaps = 26/245 (10%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  +  ++  T +R L G+ I  VAA     H +AV  +G  ++WG N+RGQLG G  I 
Sbjct: 532 GTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVASDGAVFSWGYNDRGQLGLGSTIS 591

Query: 98  RDR-PTIVSEL-SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
           +   P ++  L  KY I  A     H+ VV+ +G  L FG N  GQLG    +++  P  
Sbjct: 592 KSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQV 651

Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           V  L S+ VT  ACG   TV  ++     + + G   YGQLG G      T         
Sbjct: 652 VDALSSQVVTKAACGLYHTV--AATSDGEVYSFGKNDYGQLGLGHARNIKT--------- 700

Query: 215 EAQPRPRAIAALAGET---IVKVACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKD- 268
                P  +    GE+   IV V+CG  HTV +  KG + TWG   YG+L  G +E K+ 
Sbjct: 701 -----PALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNS 755

Query: 269 -EWVP 272
            ++VP
Sbjct: 756 AQFVP 760



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 91/198 (45%), Gaps = 20/198 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H   V   G   T+G N+ GQLG      +  P +V  LS   + KA  G  HTV  T D
Sbjct: 617 HSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSD 676

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASI 184
           G   +FG N +GQLG G  RN   P+ V+  + E    + A +CG   TV +S  E   +
Sbjct: 677 GEVYSFGKNDYGQLGLGHARNIKTPALVKTSLGESDEKIVAVSCGYYHTVTIS--EKGKL 734

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           +  G   YGQLG G+    N+          AQ  P  +++     I   +CG  H++ +
Sbjct: 735 ITWGRNDYGQLGIGSKEHKNS----------AQFVPLPMSS----KIKNASCGCYHSLIL 780

Query: 245 DSKGYVYTWGFGGYGRLG 262
            S G V  +G    G+LG
Sbjct: 781 MSNGRVMVFGRNNKGQLG 798



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 92/399 (23%), Positives = 155/399 (38%), Gaps = 68/399 (17%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           VA   E   ++ G+N  G+L  G      +   V   S   I+    G     VV  DG 
Sbjct: 458 VASFEECELFSCGQNNYGELCLGHCNSTSKLEHVPFFSAKGIRDVAGGNEVLAVVMNDGG 517

Query: 131 SLAFGWNKHGQLGSGSIRNE-IEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILN 186
               G NK GQ G+G+     I  +PVR L      + A A G +  + ++S +GA + +
Sbjct: 518 VFTCGLNKSGQCGNGTFEERVIIATPVRALSGIAISMVAAANGCEHMLAVAS-DGA-VFS 575

Query: 187 AGLPQYGQLGHGTD--------------NEYNTKDSSVKLAYEA---------------- 216
            G    GQLG G+                +Y+   ++V   + A                
Sbjct: 576 WGYNDRGQLGLGSTISKSHTPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDC 635

Query: 217 ----------QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                     Q  P+ + AL+ + + K ACG  HTVA  S G VY++G   YG+LG    
Sbjct: 636 GQLGLDHTQHQHTPQVVDALSSQVVTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLGHA 695

Query: 267 KDEWVPRRVDVF--QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----------LKN 314
           ++   P  V     + +  +     +S G  ++   +  G+L  WG+           ++
Sbjct: 696 RNIKTPALVKTSLGESDEKI---VAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEH 752

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSA 373
                  P P+       ++    G  H  +  ++   + +G    G+LG G     S+ 
Sbjct: 753 KNSAQFVPLPMSS----KIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGARTLSSAD 808

Query: 374 MPKKV--DILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
           +P  V  + L    V+ +A G+  S ++  R++    LD
Sbjct: 809 LPLPVPSNSLANDEVVRIAAGFYSSYILTGRSSDNADLD 847



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 57/105 (54%), Gaps = 1/105 (0%)

Query: 43  NLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           N+ +P  ++  +G  D + VA  C   H V +  +G+  TWGRN+ GQLG G K  ++  
Sbjct: 697 NIKTPALVKTSLGESDEKIVAVSCGYYHTVTISEKGKLITWGRNDYGQLGIGSKEHKNSA 756

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             V      KIK A  G  H++++  +G  + FG N  GQLG+G+
Sbjct: 757 QFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFGRNNKGQLGAGA 801


>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
          Length = 657

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 157/337 (46%), Gaps = 29/337 (8%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  YTWGR + G+LGHGD   +  P +   L+   I     G  HT  V+  GN   +G 
Sbjct: 26  GGVYTWGRGDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNLFTWGG 85

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             +G+LG G+      P  V  LV   V   ACG+  T  ++S     +   G  + G  
Sbjct: 86  GMYGKLGHGNESGHSTPKRVDSLVGLAVVDIACGSRHTAIVTSR--GCLYTWGDKENGVA 143

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GHG D E +            Q  P+ +  L+G+ +V+++    HT  +   G VYTWG 
Sbjct: 144 GHG-DTEGH------------QYTPKLLERLSGKRVVQLSACGFHTGCLTDAGEVYTWGE 190

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN- 314
           G +GRLGH  +++   PR V+       +     IS G  +S+     G++Y +G  ++ 
Sbjct: 191 GKFGRLGHGAERNCHSPRLVETLLGKRPVQ----ISCGGFHSAVVTADGKMYTFGGGEHG 246

Query: 315 ---NGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYG 368
              +GD     KP +  DL G  L  +  G  H      S  + +WG+  +G+LG+G  G
Sbjct: 247 QLGHGDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGC-G 305

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +K S  P+ V+ L G  V+ VA    H+  +V+  +V
Sbjct: 306 KKVST-PQLVEKLVGQKVVCVASYNEHTACLVEPHSV 341



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 131/305 (42%), Gaps = 32/305 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P     L G  I  V   C S H  AV  +G  +TWG    G+LGHG++     P  V  
Sbjct: 50  PRLTHSLAGQVITHVT--CGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHSTPKRVDS 107

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSE--V 163
           L    +     G  HT +VT  G    +G  ++G  G G    ++  P  +  L  +  V
Sbjct: 108 LVGLAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVV 167

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
             +ACG        + E   +   G  ++G+LGHG +   ++              PR +
Sbjct: 168 QLSACGFHTGCLTDAGE---VYTWGEGKFGRLGHGAERNCHS--------------PRLV 210

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L G+  V+++CG  H+  V + G +YT+G G +G+LGH ++ ++  P  V     + V
Sbjct: 211 ETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK--DLDGV 268

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNN-GDDWMYPKPLMDLSGWNLRCMD 337
              +  I+ G  +S       ++Y W     GKL +  G     P+ +  L G  + C+ 
Sbjct: 269 FLTQ--ITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQLVEKLVGQKVVCVA 326

Query: 338 SGNMH 342
           S N H
Sbjct: 327 SYNEH 331



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 19/208 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  +G+  +P  L  L G   R V       H   +   G  YTWG  + G+LGHG +  
Sbjct: 146 GDTEGHQYTPKLLERLSGK--RVVQLSACGFHTGCLTDAGEVYTWGEGKFGRLGHGAERN 203

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
              P +V  L   +  +   G  H+ VVT DG    FG  +HGQLG G   N+++P+ V+
Sbjct: 204 CHSPRLVETLLGKRPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGHGDKVNKVKPTLVK 263

Query: 158 CLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            L    +T   CG   +V L+S     +   G   +G+LGHG   + +T           
Sbjct: 264 DLDGVFLTQITCGWSHSVALTSSH--EVYTWGNGDHGKLGHGCGKKVST----------- 310

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV 244
              P+ +  L G+ +V VA    HT  +
Sbjct: 311 ---PQLVEKLVGQKVVCVASYNEHTACL 335



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 63/130 (48%), Gaps = 2/130 (1%)

Query: 33  VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
            GR     + N  SP  +  L+G   R V   C   H   V  +G+ YT+G  E GQLGH
Sbjct: 193 FGRLGHGAERNCHSPRLVETLLGK--RPVQISCGGFHSAVVTADGKMYTFGGGEHGQLGH 250

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
           GDK+ + +PT+V +L    + +   G SH+V +T       +G   HG+LG G  +    
Sbjct: 251 GDKVNKVKPTLVKDLDGVFLTQITCGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVST 310

Query: 153 PSPVRCLVSE 162
           P  V  LV +
Sbjct: 311 PQLVEKLVGQ 320



 Score = 43.5 bits (101), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N V PT ++ L GV +  +   C   H VA+      YTWG  + G+LGHG   +   P 
Sbjct: 255 NKVKPTLVKDLDGVFLTQIT--CGWSHSVALTSSHEVYTWGNGDHGKLGHGCGKKVSTPQ 312

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTE 127
           +V +L   K+    +   HT  + E
Sbjct: 313 LVEKLVGQKVVCVASYNEHTACLVE 337


>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
           putative [Toxoplasma gondii VEG]
          Length = 1205

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 157/346 (45%), Gaps = 41/346 (11%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTV 123
           C   H +A+   G  + WG N+ GQLG G+ ++ D+   V  E     I++   G  H +
Sbjct: 507 CGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFSTPIRRIACGSKHCL 566

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
            V + G+  A+G N +GQLG G +R   EP+ V  L   V    CG D++  ++S+ GA 
Sbjct: 567 AVAQYGDVFAWGANDNGQLGLGVVRPSFEPAAVTALRQAVD-VFCGDDYSACITSLGGAQ 625

Query: 184 ILNA------------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            ++             G  + G+LG G D    +  +  K+ +       ++ +L  +  
Sbjct: 626 SVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAY 685

Query: 232 VKVAC--------GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            +V C        GT+H++A+ ++G  Y WG G YGRLG     + + P R D       
Sbjct: 686 KRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDF------ 739

Query: 284 LPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN--NGDDWMYPKPLMDLSGW----NL 333
             P+ V    ++AG+ +S   +  G L+ WG+ ++  +  ++M P+  M L G      +
Sbjct: 740 --PKGVRLRSVAAGACHSLALSMDGDLWFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKV 797

Query: 334 RCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           + + +   H     ++    +WG  +  + G G    +    P++V
Sbjct: 798 KSISASERHSLAVTEAGEVFAWGDNKLYQTGCGKRQAERLDRPERV 843



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 104/428 (24%), Positives = 160/428 (37%), Gaps = 94/428 (21%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV-- 104
           P+R+R      I  ++  C + H +A+  EG  Y WG    G LG GD      P  V  
Sbjct: 172 PSRVRFRDKCKIARIS--CGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYL 229

Query: 105 -SELSKYKIKK----------------AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI 147
            SE    K K+                  AG  H++  T DG    +G   +G+LG G  
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289

Query: 148 RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           R  + P+ V  ++          D        +G  +   G   +G+LGHG   E     
Sbjct: 290 RGSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGV-LYTWGSGGFGRLGHGDQGEI---- 344

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
                     P PR +    G  +++VACGT HT+A+  KG V+ WG G    LG  E +
Sbjct: 345 ----------PVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAG--LALGFGEGE 392

Query: 268 D-----EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD- 317
           D       VP+ +     +++      I+AG  +S+    GG L +WG        +GD 
Sbjct: 393 DGSGGMVAVPKHL-----SDIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQ 447

Query: 318 -DWMYPKPLMDL--------------------------------------SGWNLRCMDS 338
            +  +PK + DL                                      S W L+ ++ 
Sbjct: 448 QNQPFPKYVADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLEC 507

Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G  H      +  +  WG    G+LG G   ++    P K++      +  +ACG  H L
Sbjct: 508 GESHTIALTGAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS-TPIRRIACGSKHCL 566

Query: 398 VIVDRTNV 405
            +    +V
Sbjct: 567 AVAQYGDV 574



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 137/361 (37%), Gaps = 72/361 (19%)

Query: 77  GRCYTWGRNERGQLGH----------------GDKIQRD-------RPTIVSELSKYKIK 113
           G+ YT+G   RG+LG+                GD  Q D       +P+ V    K KI 
Sbjct: 126 GKVYTFGLGNRGRLGYPKNKADGVAGYQGDFSGDG-QEDGPSWFTPKPSRVRFRDKCKIA 184

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV----------------- 156
           +   G  HT+ ++++G   A+G   +G LG G   +   P  V                 
Sbjct: 185 RISCGADHTLALSDEGALYAWGVGSYGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGV 244

Query: 157 -RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
            +     V  T C A     ++     ++   G    G+LG G +               
Sbjct: 245 GKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNR-------------- 290

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               P  +  +    IV V  G +H+  +D +G +YTWG GG+GRLGH +Q +  VPR+V
Sbjct: 291 GSLSPAVVDYILDRDIVFVNAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRKV 350

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLM 326
           + F    VL     ++ G+ ++      G ++ WG             +G     PK L 
Sbjct: 351 EGFGGVPVLQ----VACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGMVAVPKHLS 406

Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMH 385
           D+    L           V      + WG      LG+G   Q++   PK V D+   M+
Sbjct: 407 DIEAAVLNIAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGD--QQNQPFPKYVADLRNRMY 464

Query: 386 V 386
           V
Sbjct: 465 V 465



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 127/311 (40%), Gaps = 43/311 (13%)

Query: 33  VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           +G  +G+L     SP  +  ++  DI FV AG    H   +D +G  YTWG    G+LGH
Sbjct: 286 LGHNRGSL-----SPAVVDYILDRDIVFVNAG--DSHSACIDRQGVLYTWGSGGFGRLGH 338

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN-----KHGQLGSGSI 147
           GD+ +   P  V       + +   G  HT+ +T  G   A+G         G+ GSG +
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGFGEGEDGSGGM 398

Query: 148 ------RNEIEPSPVRCLVSEV--TATACGADFTVWLSSVEGASILNAGLPQ---YGQLG 196
                  ++IE + +          A   G D  VW   V G+S L  G  Q   + +  
Sbjct: 399 VAVPKHLSDIEAAVLNIAAGPYHSAAVTVGGDLLVW--GVGGSSRLGHGDQQNQPFPKYV 456

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRA------IAALAGE-----TIVKVACGTNHTVAVD 245
               N     D    L      R  +      +   +G      T+  + CG +HT+A+ 
Sbjct: 457 ADLRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALT 516

Query: 246 SKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             G V+ WG    G+LG  E  ++D++ P +++ F       P   I+ GS +    A  
Sbjct: 517 GAGAVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFST-----PIRRIACGSKHCLAVAQY 571

Query: 304 GQLYMWGKLKN 314
           G ++ WG   N
Sbjct: 572 GDVFAWGANDN 582



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 139/386 (36%), Gaps = 103/386 (26%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL--------------------- 107
           H  AV V G    WG     +LGHGD+  +  P  V++L                     
Sbjct: 421 HSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVSDLQSMLGVSRLKRE 480

Query: 108 -----------------SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI--R 148
                            S + ++    G SHT+ +T  G    +G N  GQLG G     
Sbjct: 481 YSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGAGAVWVWGSNDDGQLGLGEDVEE 540

Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
           ++ EP  + C  + +   ACG+     L+  +   +   G    GQLG G          
Sbjct: 541 DQYEPVKLECFSTPIRRIACGSKHC--LAVAQYGDVFAWGANDNGQLGLGV--------- 589

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG--------------YVYTWG 254
            V+ ++E    P A+ AL     V V CG +++  + S G               ++ WG
Sbjct: 590 -VRPSFE----PAAVTAL--RQAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWG 642

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
               G+LG  E          DV   + + P + V S      S  +   Q Y       
Sbjct: 643 AAESGKLGLGE----------DVASGSILTPQKVVFSVPVCACSLDSLEMQAY------- 685

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
                   K +  +S      + SG  H   + A   C +WG   YG LG G     ++ 
Sbjct: 686 --------KRVFCVS---FSPLCSGTSHSLAITAQGECYAWGAGYYGRLGIGT--TANAY 732

Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
            P + D  +G+ + SVA G  HSL +
Sbjct: 733 TPTRCDFPKGVRLRSVAAGACHSLAL 758



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/196 (21%), Positives = 74/196 (37%), Gaps = 14/196 (7%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           + H +A+  +G CY WG    G+LG G       PT        +++   AG  H++ ++
Sbjct: 700 TSHSLAITAQGECYAWGAGYYGRLGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALS 759

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            DG+   +G            R E   S    +   +     G      + S+  +   +
Sbjct: 760 MDGDLWFWG------------RREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHS 807

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
             + + G++    DN+        + A E   RP  +A L       VA G   +  + +
Sbjct: 808 LAVTEAGEVFAWGDNKLYQTGCGKRQA-ERLDRPERVAGLP-SACQWVATGPQGSFFILA 865

Query: 247 KGYVYTWGFGGYGRLG 262
            G V+  G    GRLG
Sbjct: 866 SGEVFAAGVIKSGRLG 881


>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 447

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 154/330 (46%), Gaps = 45/330 (13%)

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-----HGQLGSG 145
           GHGD + + RP  V  L++ +++   AG  H++V T+DG  L+FG+        G+LG G
Sbjct: 90  GHGDHVDKLRPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHG 149

Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
             R ++ P PV  L    +   A GA  ++ LS  +  ++ + G+   G LGHG      
Sbjct: 150 DQRTQMIPRPVLSLSGVRIVKVAAGAHHSLVLS--DQGNVFSFGVGIDGSLGHG------ 201

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
             D + +L       P+ I++L  E +V +A G+ H++ V   G VY++G G  G LGH 
Sbjct: 202 --DQARQLV------PKLISSLQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHG 253

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--------------WG 310
           +     VP++++ F    V  P   ++AG  +S   +   +LY+              +G
Sbjct: 254 DTDMSLVPKKIEHF----VQRPAVKVAAGGSHSLVLS---KLYVLEQEGRVLSFGQNSYG 306

Query: 311 KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQ 369
           +L       M   P           +++G  H  V   D    S+G AQ+G+LG+G    
Sbjct: 307 QLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHG-NDL 365

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           + +  P  +  LE   ++ VA G   SLV+
Sbjct: 366 RDNPEPTLIQSLERERIVDVAAGNNFSLVL 395



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 32/310 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L GV I  VAAG    H + +  +G  +++G    G LGHGD+ ++  P ++S 
Sbjct: 157 PRPVLSLSGVRIVKVAAGA--HHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISS 214

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L + K+    AG +H++VV E G+  +FG    G LG G     + P  +   V      
Sbjct: 215 LQREKVVDIAAGSAHSLVVAESGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPAVK 274

Query: 166 TACGADFTVWLSSV----EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            A G   ++ LS +    +   +L+ G   YGQLG G          S  +A  AQ +  
Sbjct: 275 VAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLG--------HFSRMIASPAQVQVE 326

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
           A A       V++  G +H++ + + G VY++G   +G+LGH  + +D   P  +   +R
Sbjct: 327 AAA-------VEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLER 379

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDL-SGWNLRC 335
             ++     ++AG+  S   +  G ++ +G  KN     GD+    +P +   +G  +  
Sbjct: 380 ERIVD----VAAGNNFSLVLSAEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSA 435

Query: 336 MDSGNMHHFV 345
           + +G  H  V
Sbjct: 436 ISAGYSHSLV 445



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 188/429 (43%), Gaps = 64/429 (14%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVS-----PT-------RLRP---- 52
           +V++E      G  LF      DAV R++  + GN+VS     P+       +LRP    
Sbjct: 46  LVDKELMFLIFGPDLFTWKDLPDAVLRQQ-LVAGNVVSFGLADPSGHGDHVDKLRPKCVE 104

Query: 53  -LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER-----GQLGHGDKIQRDRPTIVSE 106
            L    +R V+AG    H +    +G   ++G         G+LGHGD+  +  P  V  
Sbjct: 105 ALARERVRDVSAGL--YHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQMIPRPVLS 162

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           LS  +I K  AG  H++V+++ GN  +FG    G LG G    ++ P  +  L  E V  
Sbjct: 163 LSGVRIVKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGDQARQLVPKLISSLQREKVVD 222

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G+  ++ ++  E   + + GL   G LGHG        D+ + L       P+ I  
Sbjct: 223 IAAGSAHSLVVA--ESGDVYSFGLGSEGALGHG--------DTDMSLV------PKKIEH 266

Query: 226 LAGETIVKVACGTNHTV------AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
                 VKVA G +H++       ++ +G V ++G   YG+LG          R +    
Sbjct: 267 FVQRPAVKVAAGGSHSLVLSKLYVLEQEGRVLSFGQNSYGQLGLGH-----FSRMIASPA 321

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLR 334
           +  V      I AG+ +S      G++Y +     G+L +  D    P+P +  S    R
Sbjct: 322 QVQVEAAAVEIEAGAHHSLVLTNDGRVYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERER 381

Query: 335 CMDSGNMHHF---VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
            +D    ++F   + A+ +  S+G  + G LG    G +S+A    V    G  V +++ 
Sbjct: 382 IVDVAAGNNFSLVLSAEGTVFSFGCGKNGRLG---KGDESNATQPTVVFAAGHTVSAISA 438

Query: 392 GYGHSLVIV 400
           GY HSLV+V
Sbjct: 439 GYSHSLVVV 447



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 58/193 (30%)

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY-----GRLGHREQKDEWVPR 273
           RP+ + ALA E +  V+ G  H++     G + ++G+G       GRLGH +Q+ +    
Sbjct: 99  RPKCVEALARERVRDVSAGLYHSLVATKDGGLLSFGYGSANVVVDGRLGHGDQRTQ---- 154

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
                                                         M P+P++ LSG  +
Sbjct: 155 ----------------------------------------------MIPRPVLSLSGVRI 168

Query: 334 RCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             + +G  H  V +D  +  S+G    G LG+G   Q    +PK +  L+   V+ +A G
Sbjct: 169 VKVAAGAHHSLVLSDQGNVFSFGVGIDGSLGHGD--QARQLVPKLISSLQREKVVDIAAG 226

Query: 393 YGHSLVIVDRTNV 405
             HSLV+ +  +V
Sbjct: 227 SAHSLVVAESGDV 239


>gi|397645356|gb|EJK76793.1| hypothetical protein THAOC_01428 [Thalassiosira oceanica]
          Length = 371

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 143/321 (44%), Gaps = 56/321 (17%)

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVS---------EVTATACGADFTVWLSSVEGASIL 185
           G   H   G G I+     +  RC+V+          +   ACG + +  LSS     + 
Sbjct: 15  GHTLHSGQGGGEIK---AATTTRCVVAGDGDGDDGVRIVKAACGQEVSALLSST--GQLF 69

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI----------------AALAGE 229
            AG  ++GQLG+G   EY      +  A  A+   R++                 A   +
Sbjct: 70  TAGSSEFGQLGNGETGEYIIAAGRLGYANCAKFLRRSVFVQSESDRDGNLSTSTEAATSK 129

Query: 230 TIV----------KVACGTNHTVAVDSKGY-------VYTWGFGGYGRLGHREQKDEWVP 272
           T+            ++ G +H VAV++          V+TWG G YG LGH  Q DE+ P
Sbjct: 130 TVTLPDSFDICLSDISGGKHHFVAVEAPSSDPSHVPRVFTWGCGDYGCLGHGVQADEYSP 189

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCT---AGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
           R V  F R  V       S  SV S+CT      GQ+Y  GK KNN +  M P  +  L+
Sbjct: 190 RMVAGF-RGPVFASNHPAST-SVGSNCTLVLTRNGQVYYSGKHKNNSEATMRPAVIDALA 247

Query: 330 --GWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
             G  +  + +GN   F    S   +SWGH   GELGYG   +KSSA P  V+ L+   V
Sbjct: 248 NNGHVVTSVGAGNQTVFCCTRSGVTVSWGHGSLGELGYGAGDKKSSAAPNFVNALDSCLV 307

Query: 387 ISVACGYGHSLVIVDRTNVGE 407
            SV+CG GH+L I+ R + GE
Sbjct: 308 TSVSCGMGHTLFII-RNDDGE 327


>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
           Nc14]
          Length = 554

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 169/410 (41%), Gaps = 74/410 (18%)

Query: 8   KMVEEETGKEKGGELLFCGS--TCWDAVGRRKGALDGNLVSPTRLRP-LVGVDIRFV--A 62
           K+++   G E+   L   G   TC      + G    + V   RL P LV  DI  +  A
Sbjct: 45  KILDVACGNEQTAFLFETGDVFTCGYNDSGQCGIGSTSRVQSLRLVPALVTEDIAHIRSA 104

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H  A+   G  YT+G N RGQLGHG       PT + +L+ Y + +      HT
Sbjct: 105 NGCE--HLTAISRSGALYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHT 162

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
           +V+T +G   AFG N  GQLG     +   P P+    S  V A ACG   TV       
Sbjct: 163 IVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTV------- 215

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S+ N G+  +G+      N++    +   L Y A P   A A L    +  +ACG  HT
Sbjct: 216 VSLTNGGVVAFGK------NDHGQLGTGYTLDYHASPSLLA-APLDSLVVPSLACGYYHT 268

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+   G VY++G   YG+LGH  +     P  +    + + +     ++ G  ++   +
Sbjct: 269 IALAEHGSVYSFGRNDYGQLGHGHRHHLSEPTLIKALAKTHAVQ----VTCGCYHTLVLS 324

Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
             G++Y +G  +NN                                           +G+
Sbjct: 325 EDGKVYPFG--RNN-------------------------------------------HGQ 339

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN-VGERLD 410
           LG G     +S  P+ +  L    V+ VA G+ HS+ +    N VG R+D
Sbjct: 340 LGLGNLIDCTS--PQIIASLRDKFVVKVASGFYHSICLTATKNSVGSRMD 387



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 32/304 (10%)

Query: 1   MAELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           +A + +    E  T   + G L   G   +++ G+        + +PT+++ L    +  
Sbjct: 98  IAHIRSANGCEHLTAISRSGALYTFG---FNSRGQLGHGSTNPITTPTKIKDLASYHV-- 152

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C   H + + +EG  Y +GRN+ GQLG  D + R  P  ++  +   +     G+ 
Sbjct: 153 VEVACSYFHTIVMTMEGTLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQH 212

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPS----PVRCLVSEVTATACGADFTVW 175
           HTVV   +G  +AFG N HGQLG+G ++     PS    P+  LV  V + ACG   T+ 
Sbjct: 213 HTVVSLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLV--VPSLACGYYHTIA 270

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+  E  S+ + G   YGQLGHG  +  +               P  I ALA    V+V 
Sbjct: 271 LA--EHGSVYSFGRNDYGQLGHGHRHHLS--------------EPTLIKALAKTHAVQVT 314

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG  HT+ +   G VY +G   +G+LG     D   P+ +   +   V+     +++G  
Sbjct: 315 CGCYHTLVLSEDGKVYPFGRNNHGQLGLGNLIDCTSPQIIASLRDKFVVK----VASGFY 370

Query: 296 NSSC 299
           +S C
Sbjct: 371 HSIC 374



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 138/333 (41%), Gaps = 36/333 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y++G+N  G+L H D + R  PT +S     KI     G   T  + E G+    G+N  
Sbjct: 14  YSFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFLFETGDVFTCGYNDS 73

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV-EGASILNAGLPQYGQLGHG 198
           GQ G GS         V  LV+E  A    A+    L+++    ++   G    GQLGHG
Sbjct: 74  GQCGIGSTSRVQSLRLVPALVTEDIAHIRSANGCEHLTAISRSGALYTFGFNSRGQLGHG 133

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           + N   T              P  I  LA   +V+VAC   HT+ +  +G +Y +G    
Sbjct: 134 STNPITT--------------PTKIKDLASYHVVEVACSYFHTIVMTMEGTLYAFGRNDL 179

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------- 311
           G+LG  +  D  VP  +  F    VL     ++ G  ++  +   G +  +GK       
Sbjct: 180 GQLGIDDGMDRHVPVPLTYFNSRPVL----AVACGQHHTVVSLTNGGVVAFGKNDHGQLG 235

Query: 312 ----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
               L  +    +   PL  L   +L C   G  H    A+  S  S+G   YG+LG+G 
Sbjct: 236 TGYTLDYHASPSLLAAPLDSLVVPSLAC---GYYHTIALAEHGSVYSFGRNDYGQLGHGH 292

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               S   P  +  L   H + V CG  H+LV+
Sbjct: 293 RHHLSE--PTLIKALAKTHAVQVTCGCYHTLVL 323



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 68/284 (23%), Positives = 119/284 (41%), Gaps = 32/284 (11%)

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVR-CLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           +FG N +G+L      +   P+P+  C   ++   ACG + T +L   E   +   G   
Sbjct: 15  SFGQNSYGELCHNDTVDRTLPTPISFCHNVKILDVACGNEQTAFL--FETGDVFTCGYND 72

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI--VKVACGTNHTVAVDSKGY 249
            GQ G G+ +   +               R + AL  E I  ++ A G  H  A+   G 
Sbjct: 73  SGQCGIGSTSRVQSL--------------RLVPALVTEDIAHIRSANGCEHLTAISRSGA 118

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           +YT+GF   G+LGH        P ++      +V+     ++    ++      G LY +
Sbjct: 119 LYTFGFNSRGQLGHGSTNPITTPTKIKDLASYHVVE----VACSYFHTIVMTMEGTLYAF 174

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQYGEL 362
           G+        ++G D   P PL   +   +  +  G  H  V   +   +++G   +G+L
Sbjct: 175 GRNDLGQLGIDDGMDRHVPVPLTYFNSRPVLAVACGQHHTVVSLTNGGVVAFGKNDHGQL 234

Query: 363 GYGPYGQKSSAMPKKVDI-LEGMHVISVACGYGHSLVIVDRTNV 405
           G G Y     A P  +   L+ + V S+ACGY H++ + +  +V
Sbjct: 235 GTG-YTLDYHASPSLLAAPLDSLVVPSLACGYYHTIALAEHGSV 277


>gi|194864811|ref|XP_001971119.1| GG14780 [Drosophila erecta]
 gi|190652902|gb|EDV50145.1| GG14780 [Drosophila erecta]
          Length = 1058

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 44/338 (13%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T +G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVEQVACGHRHTLFLTANGKVYACGSN 67

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
            H QLG         P+    L+ E     +   +CG+  ++ LS  +   +L+ G    
Sbjct: 68  DHSQLGHDL------PTKRPLLIPELQDYVIIQISCGSRHSLALS--DWGQVLSWGDNDC 119

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLGH TD E                 P+ +  L  +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKE-------------IMQLPKVVRQLVSKTVVQIACGNNHSLALTSCGELYS 166

Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           WG   YG+LG    KD      P R+       +  P A I+ G  +S   +  G ++ W
Sbjct: 167 WGSNIYGQLGVNSPKDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
           G+        N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+L
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+G     +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 113/235 (48%), Gaps = 25/235 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG---DKIQRDRPTI 103
           P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG     D    + P  
Sbjct: 134 PKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPKDLTHCNYPLR 191

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           ++ L    +     G +H+ ++++ G    +G N  GQLG     N   P+ ++ L +  
Sbjct: 192 LTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPR 221
           V   ACG +F+V+L++  G     AG   YGQLGHG + NE                 PR
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---------------LPR 294

Query: 222 AIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  K   +P+ V
Sbjct: 295 MVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 166/373 (44%), Gaps = 39/373 (10%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDV 75
            G+ L+C GST    +G   G  D  +++P+++   P   V+       C   H + +  
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVE----QVACGHRHTLFLTA 57

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
            G+ Y  G N+  QLGH   +   RP ++ EL  Y I +   G  H++ +++ G  L++G
Sbjct: 58  NGKVYACGSNDHSQLGH--DLPTKRPLLIPELQDYVIIQISCGSRHSLALSDWGQVLSWG 115

Query: 136 WNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
            N  GQLG  + +  ++ P  VR LVS+ V   ACG + ++ L+S     + + G   YG
Sbjct: 116 DNDCGQLGHATDKEIMQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYG 173

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG       N+        Y     P  +  L G  +  +ACG NH+  +   G V+ W
Sbjct: 174 QLG------VNSPKDLTHCNY-----PLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----- 308
           G    G+LG  ++ +   P ++   +   V      ++ G   S      G ++      
Sbjct: 223 GRNNCGQLGLNDETNRAYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGA 278

Query: 309 WGKLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYG 365
           +G+L +    + M P+ +M+L G  +  +  GN H    V +     ++G    G+L  G
Sbjct: 279 YGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--G 336

Query: 366 PYGQKSSAMPKKV 378
               KS  +P+ V
Sbjct: 337 TRSTKSLMLPQVV 349


>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
          Length = 918

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 153/391 (39%), Gaps = 95/391 (24%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           + SP  +  L  ++   V+AG +    VA    G  Y WG N  GQLG GD+     P +
Sbjct: 1   MASPRLVDALKNINSERVSAGGMQMAVVAHS--GELYMWGANSEGQLGTGDRRDASVPRL 58

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------------SGSIR 148
           V  L    +K     + HTV   +DG++ A+G   +G+LG               S +  
Sbjct: 59  VKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATG 118

Query: 149 NEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVEG--ASILNAGLPQYGQL 195
              EP    C V             +   ACG   + +L   E    S+   GL   G+L
Sbjct: 119 ARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRL 178

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GHG + + +               P A+ AL    I  +ACG +HT  V S G +YTWG 
Sbjct: 179 GHGDEEDRHL--------------PTAVHALENVNITAIACGAHHTACVTSAGTLYTWGG 224

Query: 256 GGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
             +G+LG    +  + +P+ V    RN  +     ++ GS +S+C    G+LY WG+ + 
Sbjct: 225 AAFGKLGLGSTRGSQLLPKHVSGPLRNKAV---VSVALGSQHSACVTTDGELYTWGQGRR 281

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
                                                          LG+   G+    +
Sbjct: 282 -----------------------------------------------LGHEVQGESDEIL 294

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           P++V+ L G+ VI V CG  H+  IV+  NV
Sbjct: 295 PRRVEALLGLFVIHVVCGDAHTACIVENGNV 325


>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
          Length = 2335

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 155/344 (45%), Gaps = 36/344 (10%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  + WG N RGQLG  +  +   P     L+  K  +   G      VT +G   A G+
Sbjct: 1407 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1466

Query: 137  NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
               G+LG GS  +   P+ +  +    +++V+  A G      L+      + + G    
Sbjct: 1467 GAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHI---LALSNEGEVYSWGEGVD 1523

Query: 193  GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
            G+LGHG  +  +               PR I +L G+ IVKVA G +H+ A+++ G +YT
Sbjct: 1524 GKLGHGNRSSLD--------------HPRIIESLRGDLIVKVATGGSHSAAINATGGLYT 1569

Query: 253  WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC----TAGGGQLYM 308
            WG G YGRLGH + +D+  P+ V+  + N V+  +     G   + C    T G   ++ 
Sbjct: 1570 WGKGRYGRLGHEDSEDQLKPKLVNALKDNLVV--DVACGNGDAQTLCITEGTGGSSVVWS 1627

Query: 309  W-----GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G D      ++D L G ++  +  G+      + +  + +WG   Y  
Sbjct: 1628 WGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1687

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G    +    PK ++ L GM V+ V+ G  H +  VD  +V
Sbjct: 1688 LGHG--SDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDV 1729



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 70/395 (17%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           GG++  CG +    +G   G + G++   T++  L    I+ +A      H +A+  +G 
Sbjct: 481 GGKVYACGESTSGRLGL--GPVTGSVSRLTQV--LFPQPIKKLAVHSGGRHAMALTYDGH 536

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            Y+WG  E G+LGHG +     P  +    +  I+    G SH+  +   G    +G   
Sbjct: 537 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 596

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           +G+LG G+    ++P PV+ L   +V   ACG+     L   +   + + G   +G+LG 
Sbjct: 597 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 656

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G  +                  P+ +  L+G+ +VK+ CG   ++A+   G V+TWG G 
Sbjct: 657 GGSDGCCV--------------PKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGD 702

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
           Y RLGH   +    P+ V+  + + V+     ++ G+++      GGQ++          
Sbjct: 703 YFRLGHGSDQHVRRPQVVEGLREHKVVD----VAVGALHCLAVTEGGQVF---------- 748

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
                                              +WG   +G+ G G  G   +  P K
Sbjct: 749 -----------------------------------AWGDNDHGQQGNG--GTTVNRKPMK 771

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           V  LEG+ +  +ACG  HS+   D ++  +  + +
Sbjct: 772 VQGLEGVKITKLACGSSHSIAFADTSHEAQTFEAI 806



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 154/376 (40%), Gaps = 70/376 (18%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + A GR     + ++  PT +  +  V I  V+      H +A+  EG  Y+WG   
Sbjct: 1463 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1522

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG++   D P I+  L    I K   G SH+  +   G    +G  ++G+LG   
Sbjct: 1523 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1582

Query: 147  IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG----ASILNAGLPQYGQLGHGTDN 201
              ++++P  V  L    V   ACG      L   EG    + + + G   YG+LG G  +
Sbjct: 1583 SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSD 1642

Query: 202  EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
                              P  I  L G+ I  VACG+  ++A+   G VYTWG G Y RL
Sbjct: 1643 GCKV--------------PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRL 1688

Query: 262  GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
            GH   +    P+ ++  +   V+     +S GS++       G +Y WG    + D+   
Sbjct: 1689 GHGSDEHVRRPKLIESLRGMKVVE----VSVGSLHCIAAVDNGDVYTWG----DNDE--- 1737

Query: 322  PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
                                                  G++G G    +++ +P+ V  L
Sbjct: 1738 --------------------------------------GQIGDG--TTQATQIPRLVAAL 1757

Query: 382  EGMHVISVACGYGHSL 397
            +G H+  V+CG  H++
Sbjct: 1758 QGHHISHVSCGSAHTV 1773



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 142/344 (41%), Gaps = 43/344 (12%)

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           D   + + WG N++ QLG     +   P    +L + K+ +   G      VT  G   A
Sbjct: 427 DCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYA 486

Query: 134 FGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G +  G+LG G +   +        P P++ L     A   G    + L+      + +
Sbjct: 487 CGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL-----AVHSGGRHAMALTY--DGHVYS 539

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + G+LGHG+  +  T              PR I     + I  ++CG++H+ A+ S
Sbjct: 540 WGDGEEGKLGHGSRADALT--------------PRKIETFPEKCIRDISCGSSHSAAIGS 585

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G +YTWG G YGRLGH        P+ V       V+  +    +    + C    G +
Sbjct: 586 SGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVV--QVACGSRDAQTLCLTQDGLV 643

Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHA 357
           Y W     GKL   G D    PKP+  LSG ++  ++ G    F  A S C    +WG  
Sbjct: 644 YSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGA--QFSLALSRCGLVWTWGKG 701

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            Y  LG+G    +    P+ V+ L    V+ VA G  H L + +
Sbjct: 702 DYFRLGHG--SDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE 743



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 100/246 (40%), Gaps = 49/246 (19%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +L  P  +  L G  I  VA G    H  A++  G  YTWG+   G+LGH D   + +P 
Sbjct: 1533 SLDHPRIIESLRGDLIVKVATG--GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPK 1590

Query: 103  IVSELSKYKIKKA--GAGRSHTVVVTED--GNSLAFGWNK--HGQLGSGSIRNEIEPSPV 156
            +V+ L    +     G G + T+ +TE   G+S+ + W    +G+LG G       P+ +
Sbjct: 1591 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAII 1650

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL--- 212
              L+   +T  ACG+ F++ LS   G      G   Y +LGHG+D           L   
Sbjct: 1651 DTLMGKHITHVACGSQFSLALSKAGGVYTWGKG--DYYRLGHGSDEHVRRPKLIESLRGM 1708

Query: 213  -----------------------------------AYEAQPRPRAIAALAGETIVKVACG 237
                                                 +A   PR +AAL G  I  V+CG
Sbjct: 1709 KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCG 1768

Query: 238  TNHTVA 243
            + HTVA
Sbjct: 1769 SAHTVA 1774


>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
          Length = 2334

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 155/344 (45%), Gaps = 36/344 (10%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  + WG N RGQLG  +  +   P     L+  K  +   G      VT +G   A G+
Sbjct: 1406 GSIFGWGHNHRGQLGGPEGAKVKIPIPCPSLAALKPIQLVGGEQTLFTVTGEGKVFATGY 1465

Query: 137  NKHGQLGSGSIRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
               G+LG GS  +   P+ +  +    +++V+  A G      L+      + + G    
Sbjct: 1466 GAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHI---LALSNEGEVYSWGEGVD 1522

Query: 193  GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
            G+LGHG  +  +               PR I +L G+ IVKVA G +H+ A+++ G +YT
Sbjct: 1523 GKLGHGNRSSLD--------------HPRIIESLRGDLIVKVATGGSHSAAINATGGLYT 1568

Query: 253  WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC----TAGGGQLYM 308
            WG G YGRLGH + +D+  P+ V+  + N V+  +     G   + C    T G   ++ 
Sbjct: 1569 WGKGRYGRLGHEDSEDQLKPKLVNALKDNLVV--DVACGNGDAQTLCITEGTGGSSVVWS 1626

Query: 309  W-----GKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
            W     GKL   G D      ++D L G ++  +  G+      + +  + +WG   Y  
Sbjct: 1627 WGDGDYGKLGRGGSDGCKVPAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYR 1686

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            LG+G    +    PK ++ L GM V+ V+ G  H +  VD  +V
Sbjct: 1687 LGHG--SDEHVRRPKLIESLRGMKVVEVSVGSLHCIAAVDNGDV 1728



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 92/395 (23%), Positives = 165/395 (41%), Gaps = 70/395 (17%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           GG++  CG +    +G   G + G++   T++  L    I+ +A      H +A+  +G 
Sbjct: 480 GGKVYACGESTSGRLGL--GPVTGSVSRLTQV--LFPQPIKKLAVHSGGRHAMALTYDGH 535

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            Y+WG  E G+LGHG +     P  +    +  I+    G SH+  +   G    +G   
Sbjct: 536 VYSWGDGEEGKLGHGSRADALTPRKIETFPEKCIRDISCGSSHSAAIGSSGTLYTWGHGM 595

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           +G+LG G+    ++P PV+ L   +V   ACG+     L   +   + + G   +G+LG 
Sbjct: 596 YGRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGR 655

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G  +                  P+ +  L+G+ +VK+ CG   ++A+   G V+TWG G 
Sbjct: 656 GGSDGCCV--------------PKPVERLSGQDVVKIECGAQFSLALSRCGLVWTWGKGD 701

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD 317
           Y RLGH   +    P+ V+  + + V+     ++ G+++      GGQ++          
Sbjct: 702 YFRLGHGSDQHVRRPQVVEGLREHKVVD----VAVGALHCLAVTEGGQVF---------- 747

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
                                              +WG   +G+ G G  G   +  P K
Sbjct: 748 -----------------------------------AWGDNDHGQQGNG--GTTVNRKPMK 770

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNVGERLDQV 412
           V  LEG+ +  +ACG  HS+   D ++  +  + +
Sbjct: 771 VQGLEGVKITKLACGSSHSIAFADTSHEAQTFEAI 805



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 154/376 (40%), Gaps = 70/376 (18%)

Query: 27   STCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
            +T + A GR     + ++  PT +  +  V I  V+      H +A+  EG  Y+WG   
Sbjct: 1462 ATGYGAGGRLGIGSNESVAIPTLIESIQHVHITQVSVNAGGKHILALSNEGEVYSWGEGV 1521

Query: 87   RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
             G+LGHG++   D P I+  L    I K   G SH+  +   G    +G  ++G+LG   
Sbjct: 1522 DGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGGLYTWGKGRYGRLGHED 1581

Query: 147  IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG----ASILNAGLPQYGQLGHGTDN 201
              ++++P  V  L    V   ACG      L   EG    + + + G   YG+LG G  +
Sbjct: 1582 SEDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSD 1641

Query: 202  EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
                              P  I  L G+ I  VACG+  ++A+   G VYTWG G Y RL
Sbjct: 1642 GCKV--------------PAIIDTLMGKHITHVACGSQFSLALSKAGGVYTWGKGDYYRL 1687

Query: 262  GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
            GH   +    P+ ++  +   V+     +S GS++       G +Y WG    + D+   
Sbjct: 1688 GHGSDEHVRRPKLIESLRGMKVVE----VSVGSLHCIAAVDNGDVYTWG----DNDE--- 1736

Query: 322  PKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
                                                  G++G G    +++ +P+ V  L
Sbjct: 1737 --------------------------------------GQIGDG--TTQATQIPRLVAAL 1756

Query: 382  EGMHVISVACGYGHSL 397
            +G H+  V+CG  H++
Sbjct: 1757 QGHHISHVSCGSAHTV 1772



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 142/344 (41%), Gaps = 43/344 (12%)

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           D   + + WG N++ QLG     +   P    +L + K+ +   G      VT  G   A
Sbjct: 426 DCAAKVFVWGLNDKDQLGGLKGSKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYA 485

Query: 134 FGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            G +  G+LG G +   +        P P++ L     A   G    + L+      + +
Sbjct: 486 CGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKL-----AVHSGGRHAMALTY--DGHVYS 538

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + G+LGHG+  +  T              PR I     + I  ++CG++H+ A+ S
Sbjct: 539 WGDGEEGKLGHGSRADALT--------------PRKIETFPEKCIRDISCGSSHSAAIGS 584

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G +YTWG G YGRLGH        P+ V       V+  +    +    + C    G +
Sbjct: 585 SGTLYTWGHGMYGRLGHGNNHTLLKPKPVQALSGQQVV--QVACGSRDAQTLCLTQDGLV 642

Query: 307 YMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC---ISWGHA 357
           Y W     GKL   G D    PKP+  LSG ++  ++ G    F  A S C    +WG  
Sbjct: 643 YSWGDGDFGKLGRGGSDGCCVPKPVERLSGQDVVKIECGA--QFSLALSRCGLVWTWGKG 700

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            Y  LG+G    +    P+ V+ L    V+ VA G  H L + +
Sbjct: 701 DYFRLGHG--SDQHVRRPQVVEGLREHKVVDVAVGALHCLAVTE 742



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 100/246 (40%), Gaps = 49/246 (19%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +L  P  +  L G  I  VA G    H  A++  G  YTWG+   G+LGH D   + +P 
Sbjct: 1532 SLDHPRIIESLRGDLIVKVATG--GSHSAAINATGGLYTWGKGRYGRLGHEDSEDQLKPK 1589

Query: 103  IVSELSKYKIKKA--GAGRSHTVVVTED--GNSLAFGWNK--HGQLGSGSIRNEIEPSPV 156
            +V+ L    +     G G + T+ +TE   G+S+ + W    +G+LG G       P+ +
Sbjct: 1590 LVNALKDNLVVDVACGNGDAQTLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAII 1649

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL--- 212
              L+   +T  ACG+ F++ LS   G      G   Y +LGHG+D           L   
Sbjct: 1650 DTLMGKHITHVACGSQFSLALSKAGGVYTWGKG--DYYRLGHGSDEHVRRPKLIESLRGM 1707

Query: 213  -----------------------------------AYEAQPRPRAIAALAGETIVKVACG 237
                                                 +A   PR +AAL G  I  V+CG
Sbjct: 1708 KVVEVSVGSLHCIAAVDNGDVYTWGDNDEGQIGDGTTQATQIPRLVAALQGHHISHVSCG 1767

Query: 238  TNHTVA 243
            + HTVA
Sbjct: 1768 SAHTVA 1773


>gi|159039901|ref|YP_001539154.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918736|gb|ABW00164.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 556

 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 104/356 (29%), Positives = 157/356 (44%), Gaps = 33/356 (9%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G  I  V AG +  H +A+   G    WGRN  GQLG+GD   R  P  V   +   I  
Sbjct: 88  GTTITAVTAGGL--HSLALTSTGAVLAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITA 145

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
             AG  H++ +T  G  LA+G N HGQLG+G   N   P  V  L + VT TA  A    
Sbjct: 146 IAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGV-SLPAGVTITAVAAGAFH 204

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-- 232
            L+     ++L  G    GQLG+GT    +T              P  +   AG TI   
Sbjct: 205 SLAVTSTGAVLAWGDNSNGQLGNGTTTGSST--------------PVDVDLPAGTTITAV 250

Query: 233 -KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
                G  H++A+ S G    WG    G+LG+ +  +   P  VD+     +      ++
Sbjct: 251 AAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRSTPVDVDLPAGVTI----TAVA 306

Query: 292 AGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPL-MDL-SGWNLRCMDSG-NMHHF 344
           AG ++S      G +  WG+  +    NG       P+ +DL +G  +  + +G +    
Sbjct: 307 AGGLHSLALTAAGAVVAWGRNVSGQLGNGTTTGSSTPVDVDLPTGATINAIAAGFDFGLA 366

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +    + ++WG    G+LG G    +S+  P  VD+  G+ + +VA G  HS+ +V
Sbjct: 367 LTTAGAVVAWGRNVSGQLGNGDTINRST--PVDVDLPAGVTITAVAAGGQHSMALV 420



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 149/337 (44%), Gaps = 27/337 (8%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           A+      + WG N  GQLG+G       P  V   +   I    AG  H++ +T  G  
Sbjct: 51  AIRASDTYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGTTITAVTAGGLHSLALTSTGAV 110

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G N  GQLG+G   N   P  V     + +TA A GA  ++ L+S    ++L  G  
Sbjct: 111 LAWGRNFSGQLGNGDTTNRSTPVDVDLPAGTTITAIAAGAFHSLALTSA--GTVLAWGEN 168

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            +GQLG+G     +T              P  ++  AG TI  VA G  H++AV S G V
Sbjct: 169 LHGQLGNGGTTNMST--------------PVGVSLPAGVTITAVAAGAFHSLAVTSTGAV 214

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             WG    G+LG+        P  VD+     +    A ++  + + + T+ G  L  WG
Sbjct: 215 LAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITAVAAGVAGAAHSLALTSTGAALA-WG 273

Query: 311 KLKN----NGDDWMYPKPL-MDL-SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
              +    NGD      P+ +DL +G  +  + +G +H   + A  + ++WG    G+LG
Sbjct: 274 NNADGQLGNGDTTNRSTPVDVDLPAGVTITAVAAGGLHSLALTAAGAVVAWGRNVSGQLG 333

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            G      S+ P  VD+  G  + ++A G+   L + 
Sbjct: 334 NGT--TTGSSTPVDVDLPTGATINAIAAGFDFGLALT 368



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 129/309 (41%), Gaps = 35/309 (11%)

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
           +V++ +   +  A  G S  +  ++     A+G N  GQLG+G+      P  V     +
Sbjct: 32  MVTQAATMSLAAAENGPSAAIRASD--TYFAWGDNSDGQLGNGTTTGSSTPVDVYLPAGT 89

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +TA   G   ++ L+S    ++L  G    GQLG+G     +T              P 
Sbjct: 90  TITAVTAGGLHSLALTST--GAVLAWGRNFSGQLGNGDTTNRST--------------PV 133

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +   AG TI  +A G  H++A+ S G V  WG   +G+LG+    +   P  V +    
Sbjct: 134 DVDLPAGTTITAIAAGAFHSLALTSAGTVLAWGENLHGQLGNGGTTNMSTPVGVSLPAGV 193

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPL-MDL---SGWNL 333
            +      ++AG+ +S      G +  WG   N    NG       P+ +DL   +    
Sbjct: 194 TI----TAVAAGAFHSLAVTSTGAVLAWGDNSNGQLGNGTTTGSSTPVDVDLPAGTTITA 249

Query: 334 RCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
                    H +   S+   ++WG+   G+LG G    +S+  P  VD+  G+ + +VA 
Sbjct: 250 VAAGVAGAAHSLALTSTGAALAWGNNADGQLGNGDTTNRST--PVDVDLPAGVTITAVAA 307

Query: 392 GYGHSLVIV 400
           G  HSL + 
Sbjct: 308 GGLHSLALT 316


>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
          Length = 432

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 124/271 (45%), Gaps = 21/271 (7%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           D N   P  +  L G +I  V+ G    H  A+D +G  Y WGR      G  + +   R
Sbjct: 128 DSNENLPRLVEALKGKNIVKVSIG--GNHMAAIDKDGHLYCWGRAASAGSGGTEHVFIPR 185

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
             I  +L K K+     GRSHT  VTE G    +G    G+LG G   ++ +P  V+ L 
Sbjct: 186 -LIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYEGELGHGEKNSQYQPKKVQSLT 244

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
            +V   ACG DFT+++     + + + G   YGQLG G  +      +           P
Sbjct: 245 EKVVDVACGRDFTIFVCE---SGLYSCGADDYGQLGLGRSHGERFVQT-----------P 290

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           R+++      +V ++ G  H  A+   G VYTWG G  G+LGH E+ D  + + VD  + 
Sbjct: 291 RSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRN 350

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
             ++     ++ G  +++     G LY WG+
Sbjct: 351 FEIVQ----VACGGGHTAAVTKDGVLYTWGR 377



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 96/329 (29%), Positives = 146/329 (44%), Gaps = 32/329 (9%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           T+G N  GQLG G +   DRP  V  LS  +I    AG S T  ++ DG+   +G  ++G
Sbjct: 62  TFGLNLIGQLGQGHERPADRPFPVEALSGKRIVYVAAGDSCTAAISLDGDVYTWGSGEYG 121

Query: 141 QLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           +LG     NE  P  V  L  + +   + G +               A + + G L    
Sbjct: 122 KLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHM-------------AAIDKDGHL---- 164

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              +    S+     E    PR I   L  E ++ V+CG +HT AV  KG V+TWG G  
Sbjct: 165 -YCWGRAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGYE 223

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTAGG-GQLYMWGKLK 313
           G LGH E+  ++ P++V       V         +    S   SC A   GQL   G  +
Sbjct: 224 GELGHGEKNSQYQPKKVQSLTEKVVDVACGRDFTIFVCESGLYSCGADDYGQL---GLGR 280

Query: 314 NNGDDWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKS 371
           ++G+ ++  P+ L      ++  + +G+ H   +G D    +WG  + G+LG+G     S
Sbjct: 281 SHGERFVQTPRSLSGTGLSDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCS 340

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIV 400
            A P  VD L    ++ VACG GH+  + 
Sbjct: 341 LAKP--VDNLRNFEIVQVACGGGHTAAVT 367



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 110/232 (47%), Gaps = 28/232 (12%)

Query: 177 SSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +++E  ++L   GL   GQLG G +   +              RP  + AL+G+ IV VA
Sbjct: 52  AALENGTLLTTFGLNLIGQLGQGHERPAD--------------RPFPVEALSGKRIVYVA 97

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G + T A+   G VYTWG G YG+LGH +  +E +PR V+  +  N++     +S G  
Sbjct: 98  AGDSCTAAISLDGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVK----VSIGGN 153

Query: 296 NSSCTAGGGQLYMWGKLKNNG----DDWMYPKPLM-DLSGWNLRCMDSGNMHHFVGADSS 350
           + +     G LY WG+  + G    +    P+ +  DL    +  +  G  H     +  
Sbjct: 154 HMAAIDKDGHLYCWGRAASAGSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKG 213

Query: 351 CI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            + +WG+   GELG+G   + S   PKKV  L    V+ VACG   ++ + +
Sbjct: 214 EVWTWGNGYEGELGHGE--KNSQYQPKKVQSLT-EKVVDVACGRDFTIFVCE 262



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 73/166 (43%), Gaps = 10/166 (6%)

Query: 22  LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           L  CG+  +  +G  +   +  + +P  L      D+  ++AG    H  A+  +G  YT
Sbjct: 265 LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDVVAISAG--DYHVCALGRDGLVYT 322

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG    GQLGHG+K        V  L  ++I +   G  HT  VT+DG    +G  + GQ
Sbjct: 323 WGLGREGQLGHGEKADCSLAKPVDNLRNFEIVQVACGGGHTAAVTKDGVLYTWGRGRDGQ 382

Query: 142 LGSGSIRNEI---EPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
           LG G     I     SPV     +VT+   GA   V L S   A +
Sbjct: 383 LGRGGELESIASYRTSPV-----QVTSLPAGAVLYVTLGSDHSAVL 423



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 16/171 (9%)

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+++   + T+G    G+LG   ++    P  V+      ++     ++AG   ++  + 
Sbjct: 53  ALENGTLLTTFGLNLIGQLGQGHERPADRPFPVEALSGKRIV----YVAAGDSCTAAISL 108

Query: 303 GGQLYMWG-----KLKNNGD-DWMYPKPLMDLSGWNL-RCMDSGNMHHFVGADSSCISWG 355
            G +Y WG     KL +N D +   P+ +  L G N+ +    GN    +  D     WG
Sbjct: 109 DGDVYTWGSGEYGKLGHNDDSNENLPRLVEALKGKNIVKVSIGGNHMAAIDKDGHLYCWG 168

Query: 356 HAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
            A       G  G +   +P+ +   LE   VISV+CG  H+  + ++  V
Sbjct: 169 RAASA----GSGGTEHVFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEV 215


>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
           CCMP2712]
          Length = 277

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 127/277 (45%), Gaps = 36/277 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVS--CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           SP  +  L G+ +  VA G  S   H  AV  +G+ YTWG  + GQLGHGD      P +
Sbjct: 21  SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGSGKSGQLGHGDSQNLVLPRL 80

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-E 162
           +  L    I +   G +HTVVV++ G   A+GW   GQLG GS  N  +P  V  L   +
Sbjct: 81  IVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVK 140

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   ACG+  T  ++  E   +   G    GQLGHG D               +Q RP  
Sbjct: 141 VCKVACGSAHTAVVT--ESGHVYTWGWGVNGQLGHGDD--------------ASQSRPMY 184

Query: 223 IAALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           +  L G  +  +ACG  HTV V +    V++WG+  YG+LGH      W     D+F  N
Sbjct: 185 VKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYGQLGH----GGW-----DIFGGN 235

Query: 282 NVLPPEAV-----ISAGSVNSSCTAGGGQLYM--WGK 311
               P  +     I+ GS  +   +  G +Y   WGK
Sbjct: 236 KNRSPRPIKDLQQIACGSSYTLALSSRGDVYAFGWGK 272



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 113/222 (50%), Gaps = 20/222 (9%)

Query: 43  NLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           NLV P   R +VG+     V   C S H V V   G  + WG    GQLG G     + P
Sbjct: 74  NLVLP---RLIVGLQSNPIVEVACGSAHTVVVSKAGLVFAWGWGHFGQLGVGSTHNSNDP 130

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
             V+ L   K+ K   G +HT VVTE G+   +GW  +GQLG G   ++  P  V+ L  
Sbjct: 131 VQVTSLDGVKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQSRPMYVKKLHG 190

Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V+  ACG   TV +S V+ A + + G  +YGQLGHG  + +    +         PRP
Sbjct: 191 IYVSTLACGLAHTVVVSEVDRA-VFSWGWDEYGQLGHGGWDIFGGNKNR-------SPRP 242

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                   + + ++ACG+++T+A+ S+G VY +G+G  G+LG
Sbjct: 243 I-------KDLQQIACGSSYTLALSSRGDVYAFGWGKDGQLG 277



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/288 (28%), Positives = 124/288 (43%), Gaps = 37/288 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS--VEGASILNAG 188
            ++G+N  G LG G+      P P+  L    V + ACG       S+   E   +   G
Sbjct: 1   FSWGFNNDGALGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWG 60

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + GQLGHG                     PR I  L    IV+VACG+ HTV V   G
Sbjct: 61  SGKSGQLGHGDSQNL--------------VLPRLIVGLQSNPIVEVACGSAHTVVVSKAG 106

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG+G +G+LG     +   P +V       V      ++ GS +++     G +Y 
Sbjct: 107 LVFAWGWGHFGQLGVGSTHNSNDPVQVTSLDGVKVCK----VACGSAHTAVVTESGHVYT 162

Query: 309 WGKLKN----NGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYG 360
           WG   N    +GDD    +P+    L G  +  +  G  H  V +  D +  SWG  +YG
Sbjct: 163 WGWGVNGQLGHGDDASQSRPMYVKKLHGIYVSTLACGLAHTVVVSEVDRAVFSWGWDEYG 222

Query: 361 ELGYGP---YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +LG+G    +G   +  P+ +  L+      +ACG  ++L +  R +V
Sbjct: 223 QLGHGGWDIFGGNKNRSPRPIKDLQ-----QIACGSSYTLALSSRGDV 265


>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
           CCMP2712]
          Length = 355

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 149/353 (42%), Gaps = 73/353 (20%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKY 110
           PL   ++R + AG    H   +  +G  YTWGR   GQLGH    + +  P IV ++   
Sbjct: 32  PLNRKNVRSIGAG--KSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENR 89

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVTATAC 168
                  GR+HTVVVT++G    +G NK GQLG+G +++   P  +   ++   V + AC
Sbjct: 90  GSSAVACGRNHTVVVTDNGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLSIAC 149

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
           G   TV +  +EG +I + G  Q GQLGHG     NTK             P  +  +A 
Sbjct: 150 GEFHTVAI-CIEG-TIWSWGRNQCGQLGHG-----NTKTCYF---------PTQVVGMAK 193

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPE 287
           +  ++ ACG  HT+ +     +Y WG   YG+LG +R  K    P  VD  +R+      
Sbjct: 194 KICIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACH-- 251

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
             +  G  +S       Q+Y WG+                                    
Sbjct: 252 --VLCGYSHSMALMKNEQIYTWGR------------------------------------ 273

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            + C        G+LG G Y    S +P+ V  L  + V  +ACGY H +  V
Sbjct: 274 -NDC--------GQLGLGHY--THSPVPELVTALRSVRVQQIACGYDHCVAFV 315



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 105/228 (46%), Gaps = 27/228 (11%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            ++  C   H VA+ +EG  ++WGRN+ GQLGHG+      PT V  ++K    +A  G 
Sbjct: 144 VLSIACGEFHTVAICIEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGG 203

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLS 177
            HT+V+T+     A+G N +GQLG + S +  ++P  V  L  S      CG   ++ L 
Sbjct: 204 QHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALM 263

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             E   I   G    GQLG G               Y   P P  + AL    + ++ACG
Sbjct: 264 KNE--QIYTWGRNDCGQLGLG--------------HYTHSPVPELVTALRSVRVQQIACG 307

Query: 238 TNHTVAVDSK---------GYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
            +H VA  +           +VY+WG G  G+LGH E      PR V+
Sbjct: 308 YDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 112/283 (39%), Gaps = 27/283 (9%)

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATACGADFTVWLSSVEGASILNAGL 189
           ++G NK+GQLG G   N   P+ +  L   ++     + GA  +      E   +   G 
Sbjct: 3   SWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAEDGDVYTWGR 62

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
              GQLGH              +  E +  P  +  +       VACG NHTV V   G 
Sbjct: 63  GWEGQLGH-------------DVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGL 109

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           +YTWG    G+LG  + K    P  +D       LP    I+ G  ++      G ++ W
Sbjct: 110 IYTWGENKAGQLGTGDLKSSNSPVLIDSALN---LPSVLSIACGEFHTVAICIEGTIWSW 166

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
           G+ +       N     +P  ++ ++         G  H  V  D++ I +WG   YG+L
Sbjct: 167 GRNQCGQLGHGNTKTCYFPTQVVGMAKKICIRAACGGQHTLVLTDANKIYAWGSNAYGQL 226

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G      K+   P  VD L       V CGY HS+ ++    +
Sbjct: 227 GLN-RSDKAVLQPDIVDHLRRSGACHVLCGYSHSMALMKNEQI 268



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 19/163 (11%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRV----DVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           VY+WG   YG+LG     +  +P  +    D   R NV      I AG  +S+  A  G 
Sbjct: 1   VYSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRS----IGAGKSHSAVIAEDGD 56

Query: 306 LYMWGK--LKNNGDDW-----MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
           +Y WG+      G D      + P  +  +       +  G  H  V  D+  I +WG  
Sbjct: 57  VYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAVACGRNHTVVVTDNGLIYTWGEN 116

Query: 358 QYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVI 399
           + G+LG G    KSS  P  +D  L    V+S+ACG  H++ I
Sbjct: 117 KAGQLGTGDL--KSSNSPVLIDSALNLPSVLSIACGEFHTVAI 157


>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
          Length = 531

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 142/298 (47%), Gaps = 30/298 (10%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G      + + + P +L  L G  I  ++ G    H V    +G  Y
Sbjct: 42  EVFVFGLNCSNCLGTGD---NQSTIVPKKLEALCGKKISSLSYG-SGPHVVLCTEDGEVY 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P  + + L   K+ +   G  H++ ++ DG+  A+G+N  
Sbjct: 98  AWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNC 157

Query: 140 GQLGSGSIRNEIEPSPVR---CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQ+GSGS  N+  P+P R   CL  + V   ACG   T  ++ V    +   G    GQL
Sbjct: 158 GQVGSGSTANQ--PTPRRVSNCLQGKMVVGIACGQ--TSSMAVVSNGEVYGWGYNGNGQL 213

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G +                Q  P  +AAL G  I+++ACG  HT+A+  +G +Y WG 
Sbjct: 214 GLGNNGN--------------QLTPCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGA 259

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
             YG+LG   + ++  P ++ + ++  V+   A  SA +  S+     GQ+YMWG+ +
Sbjct: 260 NTYGQLGTGNKSNQLSPVQI-MMEKERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 314



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + +T +     FG N    LG+G  ++ I P  +  
Sbjct: 11  TLLSPQEVASIRKACVFGTSANEAIYITHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++++ + G+   V L + +G  +   G   Y QLG+GT N+  T            
Sbjct: 71  LCGKKISSLSYGSGPHVVLCTEDG-EVYAWGHNGYSQLGNGTTNQGITP----------- 118

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+   G +Y WG+   G++G     ++  PRRV  
Sbjct: 119 --VQVCTNLLIKKVVEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
              +N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---SNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V+
Sbjct: 231 HGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMMEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297


>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 1044

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/364 (28%), Positives = 163/364 (44%), Gaps = 45/364 (12%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           +D++ +A G    H   +  +G  Y+WG    G++G+   I+  RP +V  L+   +K  
Sbjct: 264 LDVQSIACG--ETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDV 321

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKH-GQLGSGSIRNEIEP----SPVRCLVSEVTATACGA 170
             G  HT  VT  G  + +G   + GQL S + RN+  P    SP+  +   V   ACG 
Sbjct: 322 AYGSKHTCAVTVSGELIEWGEGPYMGQLDSYA-RNQWFPHKLFSPLDGI--SVVKIACGP 378

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T  ++S     +   G   +G LGHG D +  T             RP+ + +L G  
Sbjct: 379 WHTAIITS--SGQLYTYGDGTFGVLGHG-DTQGTT-------------RPKEVESLKGSR 422

Query: 231 IVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           +  VACG  HT A+            +  ++TWG    G+LGH ++K + +P  VD    
Sbjct: 423 VKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTD 482

Query: 281 NNVLPPE---AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD-LSGWNLRCM 336
            + +      A+  A SV       G  ++  G+L N   D      +   L    +R +
Sbjct: 483 YDFIQVSCGTALTVALSVTGVVFTSGSSMH--GQLGNPHADGKTVSAVEGLLKSEFVRHI 540

Query: 337 DSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
            SG+ H   V  +    +WG  + G+LG G +  +S+  P  VD LEG HV S++CGY +
Sbjct: 541 SSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRST--PTLVDALEGRHVESLSCGYNY 598

Query: 396 SLVI 399
           +  +
Sbjct: 599 TAAV 602



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 14/194 (7%)

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           ++P P  + +     +  +ACG  H   +  +G VY+WG    GR+G++       P+ V
Sbjct: 251 SKPLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVV 310

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW------GKLKNNGDDWMYPKPLMD-L 328
                 +V      ++ GS ++      G+L  W      G+L +   +  +P  L   L
Sbjct: 311 QSLASLHVKD----VAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPL 366

Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G ++  +  G  H   + +     ++G   +G LG+G    + +  PK+V+ L+G  V 
Sbjct: 367 DGISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHG--DTQGTTRPKEVESLKGSRVK 424

Query: 388 SVACGYGHSLVIVD 401
            VACG  H+  IV+
Sbjct: 425 CVACGPWHTAAIVE 438


>gi|307106099|gb|EFN54346.1| hypothetical protein CHLNCDRAFT_24715 [Chlorella variabilis]
          Length = 393

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 167/380 (43%), Gaps = 46/380 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTIVS 105
           P  +R L+GV ++ VA  C   H  AVD  G  YTWG N++GQLGH  +  +   P  V+
Sbjct: 28  PRVVRALLGVPLKAVA--CGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSEVGLPGEVA 85

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLV-SEV 163
                ++    AG  HT+ V E G+  +FG N  GQLG G  +    EP  V+ L  ++V
Sbjct: 86  --MPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVREPRLVKSLQDNKV 143

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A A G + ++ L++  G  + + G    G+LGHG+        SS++        PR +
Sbjct: 144 VAVAAGMEHSLALTA--GGEVYSWGNAANGRLGHGSATPRRLFGSSIEF------LPRLV 195

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            A     + +V+ G  H+ AV + G  + WG+G + +LG    +D   P          V
Sbjct: 196 RAFEALRVEQVSAGQMHSAAVSTAGDAFLWGYGKFHQLGFGSDEDLAGP---------TV 246

Query: 284 LPP----EAVISAGSVNSSCTAGGGQLYMWGKLKN-----NGDDWMYPKPLMDLSGWNLR 334
           LPP     A ++ GS++S     GG +  WG  +N       +    PK    + G +  
Sbjct: 247 LPPLKGSTAAVACGSLHSLALQYGGHVLAWGTNQNGVLGQGHEKQQQPKRPSKVPGVSAE 306

Query: 335 CMDSGNMHHFVGADSSCI---SWGHAQYGELGY----GPYGQKSSA------MPKKVDIL 381
            + +G  H      S  +    WG +Q   L +    G  GQ           P  VD L
Sbjct: 307 QIAAGWKHSAAVTGSGKLYTWGWGGSQGTALSFEGRTGTGGQLGHGNDFDYWSPHHVDWL 366

Query: 382 EGMHVISVACGYGHSLVIVD 401
                  VACG  H+  IV+
Sbjct: 367 SLTETDLVACGMNHTAAIVE 386



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 90/205 (43%), Gaps = 23/205 (11%)

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
            L Y ++  PR + AL G  +  VACG  HT AVD  G VYTWG    G+LGH  +  E 
Sbjct: 19  SLEYASEELPRVVRALLGVPLKAVACGGAHTAAVDDSGTVYTWGLNDKGQLGHDSEDSE- 77

Query: 271 VPRRVDVFQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY-- 321
                 V     V  PE V+  SAG  ++ C    G ++ +     G+L    D  +   
Sbjct: 78  ------VGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGLGKDVVLVRE 131

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP------YGQKSSAM 374
           P+ +  L    +  + +G  H   + A     SWG+A  G LG+G       +G     +
Sbjct: 132 PRLVKSLQDNKVVAVAAGMEHSLALTAGGEVYSWGNAANGRLGHGSATPRRLFGSSIEFL 191

Query: 375 PKKVDILEGMHVISVACGYGHSLVI 399
           P+ V   E + V  V+ G  HS  +
Sbjct: 192 PRLVRAFEALRVEQVSAGQMHSAAV 216



 Score = 38.5 bits (88), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 69/159 (43%), Gaps = 18/159 (11%)

Query: 252 TWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW- 309
           T+G G  GRLGH  E   E +PR V    R  +  P   ++ G  +++     G +Y W 
Sbjct: 7   TFGNGDCGRLGHSLEYASEELPRVV----RALLGVPLKAVACGGAHTAAVDDSGTVYTWG 62

Query: 310 ----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
               G+L ++ +D     P        +  + +G  H   VG   S  S+G    G+LG 
Sbjct: 63  LNDKGQLGHDSEDSEVGLPGEVAMPERVVALSAGYYHTLCVGESGSVWSFGCNGKGQLGL 122

Query: 365 GPYGQKSSAM---PKKVDILEGMHVISVACGYGHSLVIV 400
           G    K   +   P+ V  L+   V++VA G  HSL + 
Sbjct: 123 G----KDVVLVREPRLVKSLQDNKVVAVAAGMEHSLALT 157


>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 553

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 144/340 (42%), Gaps = 30/340 (8%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+   G    WGRN  GQLG+G       P  VS  +  +     AG  H++ +T  
Sbjct: 98  HGLALTSAGTVLAWGRNIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSA 157

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
           G  LA+G N  GQLG GS  +   P  V     + V A A G D  + L+S  G ++L  
Sbjct: 158 GTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTST-GPTLLTW 216

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    GQLG GT    +T              P A+    G T+  VA G +H++ + S 
Sbjct: 217 GKNTRGQLGDGTTTGRDT--------------PVAVTLPPGVTVTSVAGGRDHSLVLTSD 262

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
                WG   +G+LG+    D  VP  V +            I+AG ++S+     G  +
Sbjct: 263 DTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEA----TAIAAGRLHSAALTSEGAAF 318

Query: 308 MW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQY 359
            W     G+L N +  D   P  +   +   L  +   +  H V   S  + ++WG    
Sbjct: 319 AWGHNGRGQLGNGSTTDSSEPVAVSLPADTRLTAIAGRDSDHNVTITSAGAALAWGANAN 378

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           GELG G    +S+  P  V +  G  V ++A G   S+ +
Sbjct: 379 GELGDGSTTDRST--PVAVSLPAGTRVAAIAAGDDQSMAL 416



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 113/250 (45%), Gaps = 23/250 (9%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIV 104
           +P  +    G  +  +AAG    H + +   G    TWG+N RGQLG G    RD P  V
Sbjct: 181 TPVAVSLPAGTTVAAIAAG--RDHNLVLTSTGPTLLTWGKNTRGQLGDGTTTGRDTPVAV 238

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
           +      +     GR H++V+T D  +LA+G N  GQLG+G+  + + P  V     +E 
Sbjct: 239 TLPPGVTVTSVAGGRDHSLVLTSDDTALAWGGNSFGQLGNGTTTDSLVPIAVALPTGTEA 298

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           TA A G   +  L+S EGA+    G    GQLG+G     +T DSS  +A  + P    +
Sbjct: 299 TAIAAGRLHSAALTS-EGAA-FAWGHNGRGQLGNG-----STTDSSEPVAV-SLPADTRL 350

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            A+AG         ++H V + S G    WG    G LG     D   P  V +     V
Sbjct: 351 TAIAGR-------DSDHNVTITSAGAALAWGANANGELGDGSTTDRSTPVAVSLPAGTRV 403

Query: 284 LPPEAVISAG 293
               A I+AG
Sbjct: 404 ----AAIAAG 409



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 117/290 (40%), Gaps = 30/290 (10%)

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
           RS    V  D   LA+G N  GQLG+G++ +  EP  V        A     D    L+ 
Sbjct: 45  RSAATAVVSD-TILAWGENDGGQLGNGTMIDSSEPVAVSLPAGTAVAAVAVGDRH-GLAL 102

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
               ++L  G    GQLG+G+    +T              P A++   G   V VA G 
Sbjct: 103 TSAGTVLAWGRNIEGQLGNGSTTSSST--------------PVAVSLPTGTRAVAVAAGA 148

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG-SVNS 297
           +H++A+ S G +  WG   +G+LG     D   P  V +     V    A I+AG   N 
Sbjct: 149 DHSLALTSAGTILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTTV----AAIAAGRDHNL 204

Query: 298 SCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCMDSGNMHHFV-GADSS 350
             T+ G  L  WGK      GD        P  +    G  +  +  G  H  V  +D +
Sbjct: 205 VLTSTGPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPPGVTVTSVAGGRDHSLVLTSDDT 264

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            ++WG   +G+LG G      S +P  V +  G    ++A G  HS  + 
Sbjct: 265 ALAWGGNSFGQLGNGTT--TDSLVPIAVALPTGTEATAIAAGRLHSAALT 312


>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 554

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 148/353 (41%), Gaps = 31/353 (8%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G  I  +AAG    H +A+   G    WG N RGQLG G    R  P  V   +   I  
Sbjct: 89  GTTITALAAG--GSHSLALTDTGVVLAWGSNSRGQLGDGTTTDRSTPVTVGLPAGTTITA 146

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
             AGR H++ +T+ G  LA+G N +GQLG G+      P  V  L +  T TA  A  T 
Sbjct: 147 LAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTTARSTPVTV-GLPAGTTITALAAS-TY 204

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+  +  + L  G    GQLG GT  + +T              P  ++  AG TI  +
Sbjct: 205 SLALTDTGAALAWGSNSRGQLGDGTTTDRST--------------PVTVSLPAGTTITAL 250

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A   +H++A+   G V  WG    G+LG     +   P  V +     +      ++AG 
Sbjct: 251 AASYDHSLALTDTGAVLAWGSNSNGQLGDGTTTNRSTPVTVGLPAGTTI----TALAAGR 306

Query: 295 VNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
            ++      G +  WG   N   GD    D   P  +   +G  +  + +G  H     D
Sbjct: 307 SHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRSTPVTVGLPAGTTITALAAGYYHSLALTD 366

Query: 349 S-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + + ++WG   YG+LG G    +S+  P  V +  G  +  +     H + +V
Sbjct: 367 TGAVLAWGGNSYGQLGDGTTTDRST--PVTVGLPAGTTITVLVSMDNHGMALV 417



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 136/327 (41%), Gaps = 29/327 (8%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG N  GQLG G    R  P  V   +   I    AG SH++ +T+ G  LA+G N  GQ
Sbjct: 62  WGDNFSGQLGDGTTTARSTPVTVGLPAGTTITALAAGGSHSLALTDTGVVLAWGSNSRGQ 121

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LG G+  +   P  V  L +  T TA  A     L+  +  ++L  G    GQLG GT  
Sbjct: 122 LGDGTTTDRSTPVTV-GLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTT 180

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
             +T              P  +   AG TI  +A  T +++A+   G    WG    G+L
Sbjct: 181 ARST--------------PVTVGLPAGTTITALAAST-YSLALTDTGAALAWGSNSRGQL 225

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD-- 317
           G     D   P  V +     +      ++A   +S      G +  WG   N   GD  
Sbjct: 226 GDGTTTDRSTPVTVSLPAGTTI----TALAASYDHSLALTDTGAVLAWGSNSNGQLGDGT 281

Query: 318 --DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM 374
             +   P  +   +G  +  + +G  H  V   + + ++WG    G+LG G    +S+  
Sbjct: 282 TTNRSTPVTVGLPAGTTITALAAGRSHTLVLTSAGAVLAWGSNSNGQLGDGTTTDRST-- 339

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVD 401
           P  V +  G  + ++A GY HSL + D
Sbjct: 340 PVTVGLPAGTTITALAAGYYHSLALTD 366


>gi|145593727|ref|YP_001158024.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
 gi|145303064|gb|ABP53646.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
           CNB-440]
          Length = 567

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 150/358 (41%), Gaps = 39/358 (10%)

Query: 54  VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
           +G  +  VAAG    H +A+   G    WG N  GQLG G  I R  P  VS      + 
Sbjct: 86  LGTTVTAVAAG--RFHSLALTSAGTVLAWGTNHFGQLGDGTLIDRSAPVEVSLPPGTTVT 143

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFT 173
              AG  H++ +T  G  LA+G N  GQLG GS      P     L S VT TA  A  +
Sbjct: 144 AVAAGGVHSMALTSVGTVLAWGGNGVGQLGDGSTTRRTTPVEA-ILPSGVTVTAVAAAES 202

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             L+     + L  GL   GQLG G+    +T              P ++A   G  +  
Sbjct: 203 HSLAVTSAGAALAWGLNGTGQLGDGSTINRST--------------PVSVALPLGTEVTA 248

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +A G  H++AV S G    WG+ G G+LG     +   P  V +     V    AV+ AG
Sbjct: 249 IAAGRLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPVSVALPLGAEV---TAVV-AG 304

Query: 294 SVNSSCTAGGGQLYMWGK----------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
            ++S+     G    WG             N+ +      P    +G  L  + S +  H
Sbjct: 305 RLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLP----TGTTLAAIASRDSDH 360

Query: 344 F--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              +  D + ++WG   +G+LG G     S+ +P  V +  G+ +++ A G  H+L +
Sbjct: 361 TIAIAGDGTALAWGSNIFGQLGDGTTTNPSTPVP--VALPTGITLLTTAAGSDHTLAL 416



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/218 (33%), Positives = 96/218 (44%), Gaps = 22/218 (10%)

Query: 41  DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           DG L+   +P  +    G  +  VAAG V  H +A+   G    WG N  GQLG G   +
Sbjct: 122 DGTLIDRSAPVEVSLPPGTTVTAVAAGGV--HSMALTSVGTVLAWGGNGVGQLGDGSTTR 179

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P      S   +    A  SH++ VT  G +LA+G N  GQLG GS  N   P  V 
Sbjct: 180 RTTPVEAILPSGVTVTAVAAAESHSLAVTSAGAALAWGLNGTGQLGDGSTINRSTPVSVA 239

Query: 158 C-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
             L +EVTA A G   ++ ++SV  A  L  G    GQLG GT    +T           
Sbjct: 240 LPLGTEVTAIAAGRLHSLAVTSVGAA--LAWGYNGTGQLGDGTTINRST----------- 286

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
              P ++A   G  +  V  G  H+ A+ + G    WG
Sbjct: 287 ---PVSVALPLGAEVTAVVAGRLHSAALTTAGTALAWG 321



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/278 (29%), Positives = 121/278 (43%), Gaps = 40/278 (14%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G N +GQLG+GS      P  V   L + VTA A G   ++ L+S    ++L  G  
Sbjct: 58  LAWGKNDNGQLGNGSTTGSNVPIAVSLPLGTTVTAVAAGRFHSLALTS--AGTVLAWGTN 115

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            +GQLG GT       D S  +     P         G T+  VA G  H++A+ S G V
Sbjct: 116 HFGQLGDGT-----LIDRSAPVEVSLPP---------GTTVTAVAAGGVHSMALTSVGTV 161

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP----EAVISAGSVNSSCTAGGGQL 306
             WG  G G+LG     D    RR    +   +LP      AV +A S + + T+ G  L
Sbjct: 162 LAWGGNGVGQLG-----DGSTTRRTTPVEA--ILPSGVTVTAVAAAESHSLAVTSAGAAL 214

Query: 307 YMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
             WG L   G        +   P  +    G  +  + +G +H   V +  + ++WG+  
Sbjct: 215 A-WG-LNGTGQLGDGSTINRSTPVSVALPLGTEVTAIAAGRLHSLAVTSVGAALAWGYNG 272

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            G+LG G    +S+  P  V +  G  V +V  G  HS
Sbjct: 273 TGQLGDGTTINRST--PVSVALPLGAEVTAVVAGRLHS 308



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 16/205 (7%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +P  +   +G ++  +AAG    H +AV   G    WG N  GQLG G  I R  P 
Sbjct: 231 NRSTPVSVALPLGTEVTAIAAG--RLHSLAVTSVGAALAWGYNGTGQLGDGTTINRSTPV 288

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V+     ++    AGR H+  +T  G +LA+G N  GQLG+G   N  E   V      
Sbjct: 289 SVALPLGAEVTAVVAGRLHSAALTTAGTALAWGDNGFGQLGNGGGSNSSEAVEVSLPTGT 348

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
             A     D    ++     + L  G   +GQLG GT    +T              P  
Sbjct: 349 TLAAIASRDSDHTIAIAGDGTALAWGSNIFGQLGDGTTTNPST--------------PVP 394

Query: 223 IAALAGETIVKVACGTNHTVAVDSK 247
           +A   G T++  A G++HT+A+ ++
Sbjct: 395 VALPTGITLLTTAAGSDHTLALPAQ 419


>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
            pisum]
          Length = 4404

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 133/286 (46%), Gaps = 25/286 (8%)

Query: 69   HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            HC+A+   G  Y WG  + G+LG G+++   +P +V  LS   I     G  H+  ++  
Sbjct: 3644 HCLALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRY 3703

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
            G+   +G  ++G+LG G   + + P  V+ L++  V   ACG+     +      ++ + 
Sbjct: 3704 GHLYTWGKGRYGRLGHGDYEDYLYPKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSW 3763

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            G   YG+LGH                 E+   P  I +L+G+ I+++ CG+  +VA+ + 
Sbjct: 3764 GDGDYGKLGHNIS--------------ESCKLPCKIESLSGKGIIQIDCGSQFSVALSAN 3809

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G +YTWG G Y RLGH   +    P+ V   Q   ++      S GS++       G++Y
Sbjct: 3810 GTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQ----FSTGSLHVLALTDDGEVY 3865

Query: 308  MWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMDSGNMHHFVGA 347
             WG       GD   +    P+P+  L G  ++ +  G+ H F  A
Sbjct: 3866 AWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQVSCGSAHSFAWA 3911



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 24/293 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGA-LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            G++  CG    D+ G R G    G + SP ++  L    I+ VA      H +A+ ++G+
Sbjct: 2645 GKVFVCG----DSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGK 2700

Query: 79   CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
              +WG  E G+LGHGD +  D P ++  L   ++     G +H+  +T DG    +G  +
Sbjct: 2701 VLSWGDGEDGKLGHGDILTLDTPKLIDSLLAKRVFYIACGSAHSAAITSDGELYTWGQGQ 2760

Query: 139  HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            +G+LG     ++  P  V+  V   +T  ACG+     L+     ++ + G   +G+LG 
Sbjct: 2761 YGRLGHSDEVSQHTPKLVKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGR 2820

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            G  +   T              P+ +  L G  +V++ CG   +VA+ + G V+TWG G 
Sbjct: 2821 GGSDGCCT--------------PQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGKGE 2866

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            Y RLG    + E V R   V Q   V      I+ G+++    +  G +Y WG
Sbjct: 2867 YYRLGL--GRGEHVRRPTLVNQLKLVTIDH--IAVGTLHCIAVSTQGDVYCWG 2915



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 144/334 (43%), Gaps = 32/334 (9%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG N RGQL   D  Q  +P     LS  K  +   G      VT  G   A G+ + 
Sbjct: 3547 YVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMFAVTSYGKVYASGYTES 3606

Query: 140  GQLGSGSIRNE----IEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            G+LG G    +    + P  V+ L + +  A   G    + LS+     +   G    G+
Sbjct: 3607 GRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALSTT--GEVYAWGDGDDGK 3664

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G    ++              +P+ + +L+ + I+ +ACG  H+ A+   G++YTWG
Sbjct: 3665 LGLGNRVTHS--------------KPQLVQSLSDKCIIDIACGGFHSAAISRYGHLYTWG 3710

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----- 309
             G YGRLGH + +D   P+ V      +V+  +    +G   + C      ++ W     
Sbjct: 3711 KGRYGRLGHGDYEDYLYPKLVQGLINYHVV--KVACGSGDAQTMCVTSDDNVWSWGDGDY 3768

Query: 310  GKLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
            GKL +N  +    P  +  LSG  +  +D G+     + A+ +  +WG   Y  LG+G  
Sbjct: 3769 GKLGHNISESCKLPCKIESLSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHG-- 3826

Query: 368  GQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              +    PK V  L+G  ++  + G  H L + D
Sbjct: 3827 SSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTD 3860



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 146/344 (42%), Gaps = 44/344 (12%)

Query: 72   AVDVEGRCYTWGRNERGQLGHGDKIQRD----RPTIVSELSKYKIKKAGAGRSHTVVVTE 127
            AV   G+ Y  G  E G+LG G    ++     P +V  L+        +G  H + ++ 
Sbjct: 3591 AVTSYGKVYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIKVAVNSGGRHCLALST 3650

Query: 128  DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILN 186
             G   A+G    G+LG G+     +P  V+ L  + +   ACG   +  +S      +  
Sbjct: 3651 TGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRY--GHLYT 3708

Query: 187  AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAV 244
             G  +YG+LGHG               YE    P+ +  L    +VKVACG+    T+ V
Sbjct: 3709 WGKGRYGRLGHGD--------------YEDYLYPKLVQGLINYHVVKVACGSGDAQTMCV 3754

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             S   V++WG G YG+LGH   +   +P +++      ++     I  GS  S   +  G
Sbjct: 3755 TSDDNVWSWGDGDYGKLGHNISESCKLPCKIESLSGKGIIQ----IDCGSQFSVALSANG 3810

Query: 305  QLYMWGKLKNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCIS 353
             LY WGK    GD +            PKP+  L G  +    +G++H   +  D    +
Sbjct: 3811 TLYTWGK----GDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEVYA 3866

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            WG    G+LG G       A P+ +  L+G  +  V+CG  HS 
Sbjct: 3867 WGDNDEGQLGDG--TAHPIARPRPIAALKGKRIQQVSCGSAHSF 3908



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 154/343 (44%), Gaps = 38/343 (11%)

Query: 71   VAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            + VD E   Y WG N++GQLG  +G K++  RPT    L+  K  +   G     +V+ +
Sbjct: 2587 IRVDSEYAVYVWGLNDKGQLGGLNGSKVK--RPTFNEALTALKPIEIVGGSKSLFIVSNE 2644

Query: 129  GNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
            G     G +  G+LG    G + +  +   +   V +  A   G    + L S++G  +L
Sbjct: 2645 GKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMAL-SLDG-KVL 2702

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G  + G+LGHG     +T              P+ I +L  + +  +ACG+ H+ A+ 
Sbjct: 2703 SWGDGEDGKLGHGDILTLDT--------------PKLIDSLLAKRVFYIACGSAHSAAIT 2748

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +YTWG G YGRLGH ++  +  P+ V  F   N+      ++ GS ++   A    
Sbjct: 2749 SDGELYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKNI----TQVACGSRDAQTLALDSE 2804

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
            G +Y W     GKL   G D    P+ +  L G  +  ++ G      + A     +WG 
Sbjct: 2805 GNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALTATGQVWTWGK 2864

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +Y  LG G    +    P  V+ L+ + +  +A G  H + +
Sbjct: 2865 GEYYRLGLG--RGEHVRRPTLVNQLKLVTIDHIAVGTLHCIAV 2905



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 110/243 (45%), Gaps = 23/243 (9%)

Query: 44   LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
            L +P  +  L+   + ++A G  S H  A+  +G  YTWG+ + G+LGH D++ +  P +
Sbjct: 2720 LDTPKLIDSLLAKRVFYIACG--SAHSAAITSDGELYTWGQGQYGRLGHSDEVSQHTPKL 2777

Query: 104  VSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
            V E     I +   G   + T+ +  +GN  ++G    G+LG G       P  V  LV 
Sbjct: 2778 VKEFVGKNITQVACGSRDAQTLALDSEGNVYSWGDGDFGKLGRGGSDGCCTPQKVERLVG 2837

Query: 161  SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
              V    CGA F+V L++     +   G  +Y +LG G                E   RP
Sbjct: 2838 HRVVQIECGAQFSVALTAT--GQVWTWGKGEYYRLGLGRG--------------EHVRRP 2881

Query: 221  RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
              +  L   TI  +A GT H +AV ++G VY WG   +G+ G+        PR V  F  
Sbjct: 2882 TLVNQLKLVTIDHIAVGTLHCIAVSTQGDVYCWGDNDHGQQGNGTTNANQEPRLVTNF-- 2939

Query: 281  NNV 283
            NN+
Sbjct: 2940 NNI 2942



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 4/169 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G  I  +   C S   VA+   G  YTWG+ +  +LGHG      +P  VS 
Sbjct: 3782 PCKIESLSGKGI--IQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSG 3839

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
            L   KI +   G  H + +T+DG   A+G N  GQLG G+      P P+  L    +  
Sbjct: 3840 LQGKKIVQFSTGSLHVLALTDDGEVYAWGDNDEGQLGDGTAHPIARPRPIAALKGKRIQQ 3899

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
             +CG+  +   +S E     N+  P    L +    E++  +   +L +
Sbjct: 3900 VSCGSAHSFAWASEEACHTDNST-PTTIPLEYDILQEFSVHELRNRLIF 3947



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 102/286 (35%), Gaps = 39/286 (13%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           +AV  +G  Y+WG NE G LGHG K      P  +   SK  +     G+     VTEDG
Sbjct: 505 LAVTQKGEVYSWGVNEFGALGHGQKYSSFPTPEPIVAFSKLIVVMVSCGKDFCAAVTEDG 564

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGL 189
               + W K     +     E+  S     VS+V   +CG+     L+      + +   
Sbjct: 565 K--LYMWGKILHSSNCCYTPELVKSISEWHVSKV---SCGSSINNTLALSREGYVFSF-- 617

Query: 190 PQYGQLGHGTDNE-YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
            +Y     G D++  N   S +   YE               IV + C  +    +D   
Sbjct: 618 -EYRNSDRGCDDKSLNVIPSMIVFDYE---------------IVSIYCHNDVNAVIDCAN 661

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+TWG G    LGH        P+ V       V      +S            GQ+Y 
Sbjct: 662 NVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQV----TSLSLADDYILALTDTGQVYC 717

Query: 309 WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
           WG+L N       P          ++C+ +  +     + + C +W
Sbjct: 718 WGQLDNENTTQCRP----------VKCLMNRQVKKIACSPNQCFAW 753



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 83/199 (41%), Gaps = 19/199 (9%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  ++ L+   +  VA G      + V  +   ++WG  + G+LGH        P  +  
Sbjct: 3728 PKLVQGLINYHVVKVACGSGDAQTMCVTSDDNVWSWGDGDYGKLGHNISESCKLPCKIES 3787

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
            LS   I +   G   +V ++ +G    +G   + +LG GS  +  +P PV  L  +    
Sbjct: 3788 LSGKGIIQIDCGSQFSVALSANGTLYTWGKGDYFRLGHGSSEHVRKPKPVSGLQGKKIVQ 3847

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--RPRAIA 224
                   V L+  +   +   G    GQLG GT                A P  RPR IA
Sbjct: 3848 FSTGSLHV-LALTDDGEVYAWGDNDEGQLGDGT----------------AHPIARPRPIA 3890

Query: 225  ALAGETIVKVACGTNHTVA 243
            AL G+ I +V+CG+ H+ A
Sbjct: 3891 ALKGKRIQQVSCGSAHSFA 3909



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           ++  D   V+  C +     +D     +TWGR     LGH +  + +RP  V  LS  ++
Sbjct: 637 MIVFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNRPKEVKFLSGKQV 696

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
                   + + +T+ G    + W   GQL +    N  +  PV+CL++ +V   AC  +
Sbjct: 697 TSLSLADDYILALTDTGQ--VYCW---GQLDN---ENTTQCRPVKCLMNRQVKKIACSPN 748



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 42/207 (20%), Positives = 80/207 (38%), Gaps = 27/207 (13%)

Query: 51  RPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
            P+V    +  V   C    C AV  +G+ Y WG+     + H        P +V  +S+
Sbjct: 537 EPIVAFSKLIVVMVSCGKDFCAAVTEDGKLYMWGK-----ILHSSNCCY-TPELVKSISE 590

Query: 110 YKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
           + + K   G S  +T+ ++ +G   +F + ++   G       + PS +     E+ +  
Sbjct: 591 WHVSKVSCGSSINNTLALSREGYVFSFEY-RNSDRGCDDKSLNVIPSMI-VFDYEIVSIY 648

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
           C  D    +      ++   G      LGH      N              RP+ +  L+
Sbjct: 649 CHNDVNAVIDC--ANNVFTWGRGNNNMLGHNNSFRVN--------------RPKEVKFLS 692

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWG 254
           G+ +  ++   ++ +A+   G VY WG
Sbjct: 693 GKQVTSLSLADDYILALTDTGQVYCWG 719



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 51/235 (21%), Positives = 91/235 (38%), Gaps = 35/235 (14%)

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           +L+  +   + + G+ ++G LGHG               Y + P P  I A +   +V V
Sbjct: 504 YLAVTQKGEVYSWGVNEFGALGHGQ-------------KYSSFPTPEPIVAFSKLIVVMV 550

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           +CG +   AV   G +Y W     G++ H      + P  V      +V    + +S GS
Sbjct: 551 SCGKDFCAAVTEDGKLYMW-----GKILHSSNCC-YTPELVKSISEWHV----SKVSCGS 600

Query: 295 VNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL--------MDLSGWNLRCMDSGNMHHFVG 346
             ++  A   + Y++     N D     K L         D    ++ C +  N    + 
Sbjct: 601 SINNTLALSREGYVFSFEYRNSDRGCDDKSLNVIPSMIVFDYEIVSIYCHNDVNA--VID 658

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             ++  +WG      LG+    + +   PK+V  L G  V S++    + L + D
Sbjct: 659 CANNVFTWGRGNNNMLGHNNSFRVNR--PKEVKFLSGKQVTSLSLADDYILALTD 711


>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
           gaditana CCMP526]
          Length = 511

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 153/335 (45%), Gaps = 31/335 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y+WGR E GQ G+G    ++ P  V  L    + +   G  HTVV+TED +  ++G    
Sbjct: 9   YSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDD 68

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG      +  P  V  L  + +    CG+  T  +S     ++   G   YG+LGHG
Sbjct: 69  GRLGHADNHWKYVPHLVSALTGKSIKQVTCGSYHTAAISDT--GALWTWGGGMYGKLGHG 126

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
            +                 P P  + A  G  + ++ACG+ HT A+ + G VY WG    
Sbjct: 127 NE--------------VGHPAPCRVEAFIGREVEQIACGSRHTAALLAGGEVYCWGDREN 172

Query: 259 GRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G  G  E  + +++P++++  +   +      I+A   +++     G L+ WG+ K    
Sbjct: 173 GVCGIGEAAEHQYLPKKLEALKGVKITQ----IAACGFHTAAITQDGALWSWGEGKFGRL 228

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
              N  + + P  +  L G  ++ +  G  H   V  D   +++G  ++G+LG+G   + 
Sbjct: 229 GQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGD--KT 286

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +  +P  V  LEG  ++ V CG+ H++ + +   V
Sbjct: 287 NRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKV 321



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 137/287 (47%), Gaps = 33/287 (11%)

Query: 130 NSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILN 186
           +S+ + W +   GQ G+GS  ++  P PV  L    V   ACG+  TV L+  E   + +
Sbjct: 5   DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGLKHLTVVQIACGSGHTVVLT--EDKDVWS 62

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G    G+LGH  DN +             +  P  ++AL G++I +V CG+ HT A+  
Sbjct: 63  WGRGDDGRLGH-ADNHW-------------KYVPHLVSALTGKSIKQVTCGSYHTAAISD 108

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G ++TWG G YG+LGH  +     P RV+ F    V      I+ GS +++    GG++
Sbjct: 109 TGALWTWGGGMYGKLGHGNEVGHPAPCRVEAFIGREV----EQIACGSRHTAALLAGGEV 164

Query: 307 YMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQ 358
           Y WG  +N         +    PK L  L G  +  + +   H   +  D +  SWG  +
Sbjct: 165 YCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGK 224

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +G LG G   +K+   P  V+ L+G+ V  VACG  HS  + +  +V
Sbjct: 225 FGRLGQG--NEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDV 269



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 165/360 (45%), Gaps = 36/360 (10%)

Query: 52  PLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           P+ G+  +  V   C S H V +  +   ++WGR + G+LGH D   +  P +VS L+  
Sbjct: 32  PVEGLKHLTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGK 91

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRC---LVSEVTAT 166
            IK+   G  HT  +++ G    +G   +G+LG G   NE+  P+P R    +  EV   
Sbjct: 92  SIKQVTCGSYHTAAISDTGALWTWGGGMYGKLGHG---NEVGHPAPCRVEAFIGREVEQI 148

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACG+  T  L  + G  +   G  + G  G G              A E Q  P+ + AL
Sbjct: 149 ACGSRHTAAL--LAGGEVYCWGDRENGVCGIGE-------------AAEHQYLPKKLEAL 193

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            G  I ++A    HT A+   G +++WG G +GRLG   +K++  P  V+  Q   V   
Sbjct: 194 KGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQ- 252

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLM--DLSGWNLRCMDSGN 340
              ++ G  +S+C    G +  +G  ++    +GD      P +   L G  +  +  G 
Sbjct: 253 ---VACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQVTCGW 309

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            H   +  D    ++G+  +G+LG+G   +  SA+PK V+ L  M V  VA    H++ +
Sbjct: 310 SHTVTLSEDGKVFTFGNGDHGKLGHGANAK--SALPKLVESLANMKVAKVASYNEHTVAL 367



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 19/199 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +L  L GV I  +AA     H  A+  +G  ++WG  + G+LG G++  +  P  V  
Sbjct: 187 PKKLEALKGVKITQIAA--CGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEG 244

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L   ++K+   G  H+  VTEDG+ L FG  +HGQLG G   N   P  V+ L  + +  
Sbjct: 245 LQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLGHGDKTNRTVPCLVKALEGAGIVQ 304

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             CG   TV LS  E   +   G   +G+LGHG     N K +           P+ + +
Sbjct: 305 VTCGWSHTVTLS--EDGKVFTFGNGDHGKLGHGA----NAKSA----------LPKLVES 348

Query: 226 LAGETIVKVACGTNHTVAV 244
           LA   + KVA    HTVA+
Sbjct: 349 LANMKVAKVASYNEHTVAL 367



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/148 (37%), Positives = 70/148 (47%), Gaps = 3/148 (2%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           GR     + N V+P  +  L GV ++ VA G     CV  D  G   T+G  E GQLGHG
Sbjct: 226 GRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTED--GDVLTFGGGEHGQLGHG 283

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
           DK  R  P +V  L    I +   G SHTV ++EDG    FG   HG+LG G+      P
Sbjct: 284 DKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLSEDGKVFTFGNGDHGKLGHGANAKSALP 343

Query: 154 SPVRCLVS-EVTATACGADFTVWLSSVE 180
             V  L + +V   A   + TV L   E
Sbjct: 344 KLVESLANMKVAKVASYNEHTVALCHAE 371


>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
 gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
          Length = 1080

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 152/393 (38%), Gaps = 99/393 (25%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  +  L G++   VAAG +      V   G  Y WG N  GQLG GD+     P +V 
Sbjct: 101 SPRLVDALKGINSASVAAGGM--QMAVVSQSGELYMWGCNSEGQLGTGDRRDASVPRVVK 158

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL-------------------GSGS 146
            L    +K     + HTV   +DG++ A+G   +G+L                   G+ +
Sbjct: 159 ALQGKIVKVVACAQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGAPT 218

Query: 147 IRNEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVE--GASILNAGLPQYG 193
                EP    CLV             +T  ACG   T +L   E    S+   GL   G
Sbjct: 219 KGARTEPLASACLVCTPRVLESLCGYFITDVACGIYHTAFLGVYEQHKTSLFTCGLGLNG 278

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +LGHG + + +               P  + AL    I  +ACG +HT  V S G +Y W
Sbjct: 279 RLGHGDEEDRHL--------------PTPVHALENLNITAIACGAHHTACVTSGGTLYMW 324

Query: 254 GFGGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           G   +G+LG    +  + +P+ V    RN  +     ++ GS +S+C    G+LY WG+ 
Sbjct: 325 GGAAFGKLGLGSTRGSQLLPKHVGGPLRNKTV---VSVALGSQHSACVTTDGELYTWGQG 381

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS 372
           +                                                LG+   G+   
Sbjct: 382 RR-----------------------------------------------LGHEVQGESDE 394

Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +P++V+ L G+ VI V CG  H+  IV+  NV
Sbjct: 395 FLPRRVEALVGLFVIHVVCGDAHTACIVENGNV 427


>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
 gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
          Length = 477

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 98/338 (28%), Positives = 140/338 (41%), Gaps = 36/338 (10%)

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           D       WG N+ G+LG G       P  V   +   I    AG  H++ VT  G +LA
Sbjct: 69  DASDTVLAWGDNKDGELGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALA 128

Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQY 192
           +G N  GQLG GS  +   P  V     + VTA A G D ++ ++S   A  L  G    
Sbjct: 129 WGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTA--LAWGDNDR 186

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LG GT    +T              P  +   AG T+  +A G  H++A+ S G V T
Sbjct: 187 GELGDGTTTRRDT--------------PVDVDLPAGTTVTAIAAGIGHSLALTSAGTVLT 232

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           WG    G+LG     D   P  VD+     V      I+AGS++S      G +  WG  
Sbjct: 233 WGLNSDGQLGDGTTTDSSTPIAVDLPAGTTV----TAIAAGSLHSLAVTTAGTILAWG-- 286

Query: 313 KNNGDDWM---------YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
            NN D  +          P  +   +   +  +D G  H   V +  S ++WG    G+L
Sbjct: 287 -NNSDGQLGDGTTTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQL 345

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G G     +S+ P  V++     V +   G  HSL + 
Sbjct: 346 GDGT--TTNSSTPIAVNLPADTTVTATTAGSLHSLAVT 381



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 150/354 (42%), Gaps = 32/354 (9%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G  I  +AAG    H +AV   G    WG N  GQLG G       P  V   +   +  
Sbjct: 104 GTTITAIAAG--HDHSLAVTSAGTALAWGNNLFGQLGDGSTTDSSTPIAVDLPAGTTVTA 161

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
             AG  H++ VT  G +LA+G N  G+LG G+      P  V     + VTA A G   +
Sbjct: 162 IAAGDDHSLAVTSAGTALAWGDNDRGELGDGTTTRRDTPVDVDLPAGTTVTAIAAGIGHS 221

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + L+S    ++L  GL   GQLG GT     T DSS  +A +           AG T+  
Sbjct: 222 LALTSA--GTVLTWGLNSDGQLGDGT-----TTDSSTPIAVDLP---------AGTTVTA 265

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +A G+ H++AV + G +  WG    G+LG     +   P  V++     +      I  G
Sbjct: 266 IAAGSLHSLAVTTAGTILAWGNNSDGQLGDGTTTNSSTPIAVNLPASTTI----TAIDGG 321

Query: 294 SVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPL-MDL-SGWNLRCMDSGNMHHF-VG 346
             +S      G    WG   +    +G       P+ ++L +   +    +G++H   V 
Sbjct: 322 RDHSLAVTSAGSALAWGDNDDGQLGDGTTTNSSTPIAVNLPADTTVTATTAGSLHSLAVT 381

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + ++WG+   G LG G     +S+ P  V++     V +   G  HS+ +V
Sbjct: 382 TAGTILAWGNNSDGRLGDGT--TTNSSTPIAVNLPADTTVTATTAGSAHSMALV 433


>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
          Length = 537

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 27/274 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P +L  L G  I  ++ G    H +    +G  Y WG N   QLG+G   Q   P  +
Sbjct: 69  IVPKKLEALCGKKISSLSYG-SGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQV 127

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
            + L   K+ +   G  H++ ++ DG+  A+G+N  GQ+GSGS  N+  P+P R   CL 
Sbjct: 128 CTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTPRRVSNCLQ 185

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            + V   ACG   T  ++ V    +   G    GQLG G +                Q  
Sbjct: 186 DKMVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQLGLGNNGN--------------QLT 229

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  +AAL G  I+++ACG  HT+A+  +G +Y WG   YG+LG   + ++  P ++ + +
Sbjct: 230 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI-MME 288

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +  V+   A  SA +  S+     GQ+YMWG+ +
Sbjct: 289 KERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 320



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  +  T +     FG N    LG+G  ++ I P  +  
Sbjct: 17  TLLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEA 76

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++++ + G+   V L + +G  +   G   Y QLG+G  N+  T            
Sbjct: 77  LCGKKISSLSYGSGPHVLLCTEDG-EVYAWGHNGYSQLGNGATNQGVTP----------- 124

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+   G +Y WG+   G++G     ++  PRRV  
Sbjct: 125 --VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 180

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
              +N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 181 ---SNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 236

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V+
Sbjct: 237 HGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIMMEKERVV 293

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 294 EIAACHSAHT 303



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTC---WDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           L  +K++E   G      L F G      ++  G+       N  +P R+   +  D   
Sbjct: 131 LLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ-DKMV 189

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C     +AV   G  Y WG N  GQLG G+   +  P  V+ L    I +   G +
Sbjct: 190 VGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYA 249

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           HT+ +T++G   A+G N +GQLG+G+  N++ P  +
Sbjct: 250 HTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI 285


>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
           gallopavo]
          Length = 537

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 133/274 (48%), Gaps = 27/274 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P +L  L G  I  ++ G    H +    +G  Y WG N   QLG+G   Q   P  +
Sbjct: 69  IVPKKLEALCGKKISSLSYG-SGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQV 127

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLV 160
            + L   K+ +   G  H++ ++ DG+  A+G+N  GQ+GSGS  N+  P+P R   CL 
Sbjct: 128 CTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQ--PTPRRVSNCLQ 185

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            + V   ACG   T  ++ V    +   G    GQLG G +                Q  
Sbjct: 186 DKMVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQLGLGNNGN--------------QLT 229

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  +AAL G  I+++ACG  HT+A+  +G +Y WG   YG+LG   + ++  P ++ + +
Sbjct: 230 PCRVAALHGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI-MME 288

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +  V+   A  SA +  S+     GQ+YMWG+ +
Sbjct: 289 KERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR 320



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  +  T +     FG N    LG+G  ++ I P  +  
Sbjct: 17  TLLSPQEIASIRKACVFGTSANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEA 76

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++++ + G+   V L + +G  +   G   Y QLG+G  N+  T            
Sbjct: 77  LCGKKISSLSYGSGPHVLLCTEDG-EVYAWGHNGYSQLGNGATNQGVTP----------- 124

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+   G +Y WG+   G++G     ++  PRRV  
Sbjct: 125 --VQVCTNLLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 180

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
              +N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 181 ---SNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 236

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V+
Sbjct: 237 HGVCILQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPLQIMMEKERVV 293

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 294 EIAACHSAHT 303



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)

Query: 4   LEAEKMVEEETGKEKGGELLFCGSTC---WDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           L  +K++E   G      L F G      ++  G+       N  +P R+   +  D   
Sbjct: 131 LLLKKVIEVACGSHHSMALSFDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQ-DKMV 189

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C     +AV   G  Y WG N  GQLG G+   +  P  V+ L    I +   G +
Sbjct: 190 VGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQLTPCRVAALHGVCILQIACGYA 249

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           HT+ +T++G   A+G N +GQLG+G+  N++ P  +
Sbjct: 250 HTLALTDEGLLYAWGANTYGQLGTGNKSNQLSPLQI 285


>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 364

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 150/328 (45%), Gaps = 32/328 (9%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +PT L  LVG DI  +AA     H   +  EG  YT G N+ GQLG     ++  P  V+
Sbjct: 25  TPTSLSTLVGKDIVHIAAS--DYHTAFLTDEGEVYTTGSNDAGQLGVRGMEEQVVPIRVA 82

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG--SGSIRNEIEPSPVRCLVS-E 162
            L  + +     G  HTV VTE G   ++G +++GQLG  SG+I + ++P  V+      
Sbjct: 83  ALDTHMVTHIACGFKHTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPRIVKGSRDLH 142

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            +  A G   T+ L+      + + G    G LGHG  +  +T              P  
Sbjct: 143 FSRVAAGGYHTLALTG--SGDVYSFGDGSSGALGHGNLDGCST--------------PSL 186

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           + +L G  + ++ACG NH+ A+   G V+TWG G YG+LGH   ++  +P  V     ++
Sbjct: 187 VKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALVDHD 246

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLRCM 336
           V+     I+ G  ++      G+L+ WG            +D + PK +  L G  L  +
Sbjct: 247 VIQ----IACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGRVLVQV 302

Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELG 363
            +G  H  V  D   +  WG  +  +LG
Sbjct: 303 SAGARHTVVLLDRGEVYGWGDCEQRQLG 330



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 136/273 (49%), Gaps = 25/273 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--GDKIQRDRPT 102
           V P R+  L    +  +A G    H VAV   G   +WG +E GQLG   G+ +   +P 
Sbjct: 76  VVPIRVAALDTHMVTHIACGFK--HTVAVTETGALASWGGDEYGQLGFDSGNIVDGVQPR 133

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
           IV         +  AG  HT+ +T  G+  +FG    G LG G++     PS V+ L   
Sbjct: 134 IVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTPSLVKSLWGL 193

Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            VT  ACG + +  L+ V+G  +   G  +YGQLGHG+         ++KL       P 
Sbjct: 194 GVTQIACGENHSAALT-VDG-KVFTWGRGKYGQLGHGSTQ-------NIKL-------PV 237

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           A+ AL    ++++ACG +HT+A+ S G +++WG G +G+ GH  ++D   P++V   +  
Sbjct: 238 AVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVHQLEGR 297

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
            ++     +SAG+ ++      G++Y WG  + 
Sbjct: 298 VLVQ----VSAGARHTVVLLDRGEVYGWGDCEQ 326



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 148/336 (44%), Gaps = 32/336 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y  GR + GQLG GD      PT +S L    I    A   HT  +T++G     G N  
Sbjct: 5   YALGRGDLGQLGIGDYSDHPTPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVYTTGSNDA 64

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG   +  ++ P  V  L +  VT  ACG   TV ++  E  ++ + G  +YGQLG  
Sbjct: 65  GQLGVRGMEEQVVPIRVAALDTHMVTHIACGFKHTVAVT--ETGALASWGGDEYGQLGFD 122

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           + N  +              +PR +         +VA G  HT+A+   G VY++G G  
Sbjct: 123 SGNIVD------------GVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSS 170

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
           G LGH        P  V       V      I+ G  +S+     G+++ WG+ K     
Sbjct: 171 GALGHGNLDGCSTPSLVKSLWGLGVTQ----IACGENHSAALTVDGKVFTWGRGKYGQLG 226

Query: 314 -NNGDDWMYP---KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQ 369
             +  +   P   K L+D     + C   G+    + +D    SWGH  +G+ G+G   +
Sbjct: 227 HGSTQNIKLPVAVKALVDHDVIQIAC--GGDHTLAITSDGRLFSWGHGLWGQTGHGT--K 282

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +    PK+V  LEG  ++ V+ G  H++V++DR  V
Sbjct: 283 EDVLSPKQVHQLEGRVLVQVSAGARHTVVLLDRGEV 318



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 102/215 (47%), Gaps = 18/215 (8%)

Query: 42  GNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           GN+V   + R + G  D+ F        H +A+   G  Y++G    G LGHG+      
Sbjct: 124 GNIVDGVQPRIVKGSRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCST 183

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P++V  L    + +   G +H+  +T DG    +G  K+GQLG GS +N   P  V+ LV
Sbjct: 184 PSLVKSLWGLGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALV 243

Query: 161 S-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   ACG D T+ ++S     + + G   +GQ GHGT  +  +              
Sbjct: 244 DHDVIQIACGGDHTLAITS--DGRLFSWGHGLWGQTGHGTKEDVLS-------------- 287

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           P+ +  L G  +V+V+ G  HTV +  +G VY WG
Sbjct: 288 PKQVHQLEGRVLVQVSAGARHTVVLLDRGEVYGWG 322



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 4/140 (2%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G LDG   +P+ ++ L G+ +  +A  C   H  A+ V+G+ +TWGR + GQLGHG    
Sbjct: 176 GNLDG-CSTPSLVKSLWGLGVTQIA--CGENHSAALTVDGKVFTWGRGKYGQLGHGSTQN 232

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
              P  V  L  + + +   G  HT+ +T DG   ++G    GQ G G+  + + P  V 
Sbjct: 233 IKLPVAVKALVDHDVIQIACGGDHTLAITSDGRLFSWGHGLWGQTGHGTKEDVLSPKQVH 292

Query: 158 CLVSEV-TATACGADFTVWL 176
            L   V    + GA  TV L
Sbjct: 293 QLEGRVLVQVSAGARHTVVL 312


>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
          Length = 4285

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 141/312 (45%), Gaps = 25/312 (8%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 2715 GKVYACGEATNGRLGL--GMSSGTVPIPRQVTALSSYVVKKVAVHSGGRHATALTVDGKV 2772

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 2773 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2832

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 2833 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 2892

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 2893 GSEGCNV--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 2938

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKN 314
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG      + 
Sbjct: 2939 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDAGQVYAWGDNDHGQQG 2994

Query: 315  NGDDWMYPKPLM 326
            NG   +  KP +
Sbjct: 2995 NGTTTVNRKPTL 3006



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 104/364 (28%), Positives = 165/364 (45%), Gaps = 37/364 (10%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVS 105
            P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G        P  V+
Sbjct: 2687 PSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGMSSGTVPIPRQVT 2744

Query: 106  ELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
             LS Y +KK    +G  H   +T DG   ++G    G+LG  S  N  +P  +  L ++ 
Sbjct: 2745 ALSSYVVKKVAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR 2804

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            +   ACG+  +  L+S     +   GL +YG+LGHG        D++ +L      +P+ 
Sbjct: 2805 IRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG--------DNTTQL------KPKM 2848

Query: 223  IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   VP+ ++    
Sbjct: 2849 VKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLNG 2908

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP--LMDLSGWNLR 334
              V      I  G+  S      G ++ WGK       +G D    KP  +  L G  + 
Sbjct: 2909 QGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIV 2964

Query: 335  CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
             +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG  +  VACG 
Sbjct: 2965 HVAVGALHCLAVTDAGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEGQKITRVACGS 3022

Query: 394  GHSL 397
             HS+
Sbjct: 3023 SHSV 3026



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/269 (28%), Positives = 117/269 (43%), Gaps = 31/269 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +PT L  +  V IR VA      HC+A+  EG  Y+WG  E G+LGHG++   DRP +V 
Sbjct: 3706 APTLLESIQHVFIRKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVE 3765

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
             L   ++    AG +H+  VT  G+   +G  ++G+LG     ++++P  V  L    V 
Sbjct: 3766 SLRGTEVVDIAAGGAHSACVTSAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVV 3825

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS---SVKLAYEAQP--- 218
              ACG+     L   +  ++ + G   YG+LG G  +          S+++   + P   
Sbjct: 3826 DVACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPS 3885

Query: 219  ------------------------RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
                                    RPR +  L G+ ++ +A G+ H V    +G VYTWG
Sbjct: 3886 WPRLDVGGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWG 3945

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                G+LG         PR V   Q   V
Sbjct: 3946 DNDEGQLGDGTTNAIQRPRLVAALQGRKV 3974



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  +   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  +VA+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEALQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/375 (25%), Positives = 150/375 (40%), Gaps = 74/375 (19%)

Query: 77   GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            G  Y WG N RGQLG  +  +   PT    L+  +  +   G      VT DG   A G+
Sbjct: 3631 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGY 3690

Query: 137  NKHGQLGSGSIRNEIEPS---PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
               G+LG G   +   P+    ++ +     A   G    + LSS EG  + + G  + G
Sbjct: 3691 GAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSS-EG-EVYSWGEAEDG 3748

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
            +LGHG  +  +              RPR + +L G  +V +A G  H+  V S G +YTW
Sbjct: 3749 KLGHGNRSPCD--------------RPRVVESLRGTEVVDIAAGGAHSACVTSAGDLYTW 3794

Query: 254  GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--- 310
            G G YGRLGH + +D+  P+ V+  Q + V+  +    +G   + C      ++ WG   
Sbjct: 3795 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVV--DVACGSGDAQTLCLTDDDTVWSWGDGD 3852

Query: 311  ----------------------------------------------KLKNNGDDWM-YPK 323
                                                          +L +  DD +  P+
Sbjct: 3853 YGKLGRGGSDGCKVPMKVPLSLRVGRPSTPPPSWPRLDVGGKGDYHRLGHGSDDHVRRPR 3912

Query: 324  PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
             +  L G  +  + +G++H     +   + +WG    G+LG G     +   P+ V  L+
Sbjct: 3913 QVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQLGDG--TTNAIQRPRLVAALQ 3970

Query: 383  GMHVISVACGYGHSL 397
            G  V  VACG  H+L
Sbjct: 3971 GRKVNRVACGSAHTL 3985



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 119/271 (43%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G          GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC         +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEALQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 2790 NCDKPRLIEALKTKRIRDIA--CGSSHSAALTSSGELYTWGLGEYGRLGHGDNTTQLKPK 2847

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 2848 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQNIERLN 2907

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD--------SSVK 211
             + V    CGA F++ L+  +   +   G   Y +LGHG+D                 V 
Sbjct: 2908 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKKIVH 2965

Query: 212  LAYEA------------------------------QPRPRAIAALAGETIVKVACGTNHT 241
            +A  A                                +P  +  L G+ I +VACG++H+
Sbjct: 2966 VAVGALHCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3025

Query: 242  VA 243
            VA
Sbjct: 3026 VA 3027



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 113/284 (39%), Gaps = 36/284 (12%)

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD--FTVWLSSVEGASILNAGLPQYG 193
            W   G  G   IR EI P     LV  +  T   AD  +   L  V G + LN       
Sbjct: 2609 WQSSGSQGKHWIRLEIFPD---VLVHRLKMTVDPADSSYMPSLVVVSGGNSLN------- 2658

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQ--PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
             L        +  D++V L  +      P     L+   +V+VA G+    AV  +G VY
Sbjct: 2659 NLIELKTINISPTDTTVSLLSDCTEIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2718

Query: 252  TWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
              G    GRLG         +PR+V     + V+   AV S G   ++ T   G+++ WG
Sbjct: 2719 ACGEATNGRLGLGMSSGTVPIPRQVTALS-SYVVKKVAVHSGGRHATALTV-DGKVFSWG 2776

Query: 311  KLKNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            +    GDD             P+ +  L    +R +  G+ H      S    +WG  +Y
Sbjct: 2777 E----GDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 2832

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGY--GHSLVIVD 401
            G LG+G     +   PK V +L G  VI VACG     +L + D
Sbjct: 2833 GRLGHG--DNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTD 2874



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 2/83 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P +++ L G  +  +A G  S HCV    EG  YTWG N+ GQLG G      R
Sbjct: 3905 DDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEEGEVYTWGDNDEGQLGDGTTNAIQR 3962

Query: 101  PTIVSELSKYKIKKAGAGRSHTV 123
            P +V+ L   K+ +   G +HT+
Sbjct: 3963 PRLVAALQGRKVNRVACGSAHTL 3985



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 58/126 (46%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   VA+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEALQGKKVIDVA 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q      + + EPS +  L    +   ACG A    
Sbjct: 717 AGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQTKPEPSLLPGLDTKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 2946 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDAGQVYAWGDNDHGQQGNGTTTVNRK 3003

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3004 PTLVQGLEGQKITRVACGSSHSVAWT 3029



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 85/230 (36%), Gaps = 59/230 (25%)

Query: 226 LAGETIVKVACGT--------------------------------------------NHT 241
           LA   + ++AC                                              +H 
Sbjct: 449 LANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHY 508

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS  S+   
Sbjct: 509 LALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT 568

Query: 302 GGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSC 351
             G+LY WG+         + +D   P  +  L G  L+ +D    SG+       D+  
Sbjct: 569 AEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQPLAVTDNGQ 626

Query: 352 I-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 627 VWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALT 674



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   +V +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 699

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY-----NTKDSSVKLAYEAQPRPRA 222
               +   L +++G  +++        L    D+E      N +       ++ +P P  
Sbjct: 700 ----YPKLLEALQGKKVIDVAAGSTHCLALTEDSEVHSWGNNDQCQHFDTLHQTKPEPSL 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 52/123 (42%), Gaps = 9/123 (7%)

Query: 83   GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
            G+ +  +LGHG      RP  V  L   K+     G  H V  TE+G    +G N  GQL
Sbjct: 3893 GKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEEGEVYTWGDNDEGQL 3952

Query: 143  GSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
            G G+      P  V  L   +V   ACG+  T+  S+ + AS         G+L      
Sbjct: 3953 GDGTTNAIQRPRLVAALQGRKVNRVACGSAHTLAWSTSKPASA--------GKLPAQVPM 4004

Query: 202  EYN 204
            EYN
Sbjct: 4005 EYN 4007



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 15/169 (8%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3624 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---TLRPVQLIGGEQTLFAVT 3680

Query: 301  AGGGQLYMWG------KLKNNGDDWMYPKPLMDLSGWNLR--CMDSGNMHHF-VGADSSC 351
            A  G+LY  G            +    P  L  +    +R   ++SG  H   + ++   
Sbjct: 3681 A-DGKLYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV 3739

Query: 352  ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             SWG A+ G+LG+G   +     P+ V+ L G  V+ +A G  HS  + 
Sbjct: 3740 YSWGEAEDGKLGHG--NRSPCDRPRVVESLRGTEVVDIAAGGAHSACVT 3786


>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
          Length = 4706

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 135/292 (46%), Gaps = 21/292 (7%)

Query: 20   GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
            G++  CG      +G   G   G +  P ++  L    ++ VA      H +A+ V+G+ 
Sbjct: 3012 GKVYACGEATNGRLGL--GISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKV 3069

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            ++WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 3070 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAAITSSGELYTWGLGEY 3129

Query: 140  GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 3130 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 3189

Query: 199  TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                 N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 3190 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 3235

Query: 259  GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 3236 FRLGHGTDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDTGQVYAWG 3283



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 168/374 (44%), Gaps = 38/374 (10%)

Query: 38   GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
            G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 2974 GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 3031

Query: 96   IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                 P  ++ LS Y +KK    +G  H + +T DG   ++G    G+LG  S  N  +P
Sbjct: 3032 GTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKP 3091

Query: 154  SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
              +  L ++ +   ACG+  +  ++S     +   GL +YG+LGHG +            
Sbjct: 3092 RLIEALKTKRIRDIACGSSHSAAITS--SGELYTWGLGEYGRLGHGDNT----------- 3138

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 3139 ---TQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 3195

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
            +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 3196 IPQNIERLNGQGV----CQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRKPQV 3251

Query: 325  LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  L G  +  +  G +H     D+  + +WG   +G+ G G      +  P  V  LEG
Sbjct: 3252 VEGLRGKKIVHVAVGALHCLAVTDTGQVYAWGDNDHGQQGNG--TTTVNRKPTLVQGLEG 3309

Query: 384  MHVISVACGYGHSL 397
              +  VACG  HS+
Sbjct: 3310 QKITRVACGSSHSV 3323



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 94/349 (26%), Positives = 154/349 (44%), Gaps = 39/349 (11%)

Query: 72   AVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            A  +  + + WG N++ QLG   G KI+   P+    LS   + +   G      VT +G
Sbjct: 2955 AATIRTKVFVWGLNDKDQLGGLKGSKIK--VPSFSETLSALNVVQVAGGSKSLFAVTVEG 3012

Query: 130  NSLAFGWNKHGQLG----SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
               A G   +G+LG    SG++    + + +   V +  A   G    + L +V+G  + 
Sbjct: 3013 KVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMAL-TVDG-KVF 3070

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
            + G    G+LGH +    +              +PR I AL  + I  +ACG++H+ A+ 
Sbjct: 3071 SWGEGDDGKLGHFSRMNCD--------------KPRLIEALKTKRIRDIACGSSHSAAIT 3116

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
            S G +YTWG G YGRLGH +   +  P+ V V   + V+     ++ GS ++   A    
Sbjct: 3117 SSGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQ----VACGSRDAQTLALTDE 3172

Query: 304  GQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGH 356
            G ++ W     GKL   G +    P+ +  L+G  +  ++ G         S  + +WG 
Sbjct: 3173 GLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGK 3232

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y  LG+G         P+ V+ L G  ++ VA G  H L + D   V
Sbjct: 3233 GDYFRLGHG--TDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDTGQV 3279



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + + P  ++ L   +I  +AA     H +A+   G  ++WG  + G+LGHGD +  
Sbjct: 477 AYNSDTLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S LS  +  K       G +++  +T +G    +G   +G+LG GS  ++  P 
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   +CG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  +VA+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVVD----VAAGSTHCLALTEDSEVHSWG 735



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 149/372 (40%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N++ P +   L  + I  +A  C     + +   GR Y    N    LG         P
Sbjct: 438 ANVIGPIQCEGLANLGITQIA--CAEKRFLILSRNGRVYMQAYNS-DTLG---------P 485

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   I K  A     H + +   G   ++G    G+LG G      EP  +  L
Sbjct: 486 QLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHGDTVPLEEPKMISAL 545

Query: 160 V-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V   ACG+ ++  +++ EG  +   G   YG+LGHG+               
Sbjct: 546 SGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGSS-------------- 589

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           E Q  P  +  L G  ++ V+CG+    T+AV   G V++WG G YG+LG         P
Sbjct: 590 EDQTIPMLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + ++  Q  +V+     +  GS  S      GQ+Y WGK  N        +   YPK L 
Sbjct: 650 KLIEKLQDLDVVK----VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +  +    + +   P  +  L+  H
Sbjct: 706 GLQGKKVVDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRITKPEPTALPGLDTKH 763

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 764 IVGIACGPAQSF 775



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 119/267 (44%), Gaps = 34/267 (12%)

Query: 153 PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  V+ L S  +   A  +D   +L+      + + G    G+LGHG          +V 
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGGRLGHG---------DTVP 535

Query: 212 LAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           L       P+ I+AL    AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH   +
Sbjct: 536 LE-----EPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSE 590

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMY 321
           D+ +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D    
Sbjct: 591 DQTIPMLVTGLKGLKVI--DVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT 648

Query: 322 PK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           PK    L DL    +RC         +  D    SWG      LG+G   ++    PK +
Sbjct: 649 PKLIEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHG--TEEHVRYPKLL 704

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNV 405
           + L+G  V+ VA G  H L + + + V
Sbjct: 705 EGLQGKKVVDVAAGSTHCLALTEDSEV 731



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/233 (27%), Positives = 93/233 (39%), Gaps = 46/233 (19%)

Query: 77   GRCYTWGRNERGQLG--HGDKIQRDRPT-------------------------IVSELSK 109
            G  Y WG N RGQLG   G K++   P                           V  L  
Sbjct: 3955 GTIYGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQG 4014

Query: 110  YKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTAT 166
            Y++     G+G + T+ +T+D    ++G   +G+LG G       P  +  L    V   
Sbjct: 4015 YRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKV 4074

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
             CG+ F+V L+  +  ++   G   Y +LGHG+D+                 RPR +  L
Sbjct: 4075 ECGSQFSVALT--KSGAVYTWGKGDYHRLGHGSDDHVR--------------RPRQVQGL 4118

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
             G+ ++ +A G+ H V     G VYTWG    G+LG         PR V   Q
Sbjct: 4119 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQ 4171



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 63/242 (26%), Positives = 99/242 (40%), Gaps = 45/242 (18%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N   P  +  L    IR +A  C S H  A+   G  YTWG  E G+LGHGD   + +P 
Sbjct: 3087 NCDKPRLIEALKTKRIRDIA--CGSSHSAAITSSGELYTWGLGEYGRLGHGDNTTQLKPK 3144

Query: 103  IVSELSKYKIKKAGAGR--SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            +V  L  +++ +   G   + T+ +T++G   ++G    G+LG G       P  +  L 
Sbjct: 3145 MVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLN 3204

Query: 161  SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN--------------- 204
             + V    CGA F++ L+  +   +   G   Y +LGHGTD                   
Sbjct: 3205 GQGVCQIECGAQFSLALT--KSGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKKIVH 3262

Query: 205  ----------TKDSSVKLAY-------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                        D+    A+                 +P  +  L G+ I +VACG++H+
Sbjct: 3263 VAVGALHCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITRVACGSSHS 3322

Query: 242  VA 243
            VA
Sbjct: 3323 VA 3324



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 15/184 (8%)

Query: 223  IAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            + AL G  ++ +ACG+    T+ +     V++WG G YG+LG        VP ++D    
Sbjct: 4009 VEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4068

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMY-PKPLMDLSGWNLR 334
              V+     +  GS  S      G +Y WGK     L +  DD +  P+ +  L G  + 
Sbjct: 4069 LGVVK----VECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVI 4124

Query: 335  CMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
             + +G++H      D    +WG    G+LG G     +   P+ V  L+G  +  VACG 
Sbjct: 4125 AIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG--TTNAIQRPRLVAALQGKKINRVACGS 4182

Query: 394  GHSL 397
             H+L
Sbjct: 4183 AHTL 4186



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 12/169 (7%)

Query: 37   KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            +G  DG  V P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG   
Sbjct: 4051 RGGSDGCKV-PMKIDSLTGLGV--VKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDD 4107

Query: 97   QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
               RP  V  L   K+     G  H V  TEDG    +G N  GQLG G+      P  V
Sbjct: 4108 HVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLV 4167

Query: 157  RCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
              L   ++   ACG+  T+  S+ + A   NA     G+L      EYN
Sbjct: 4168 AALQGKKINRVACGSAHTLAWSTSKPA---NA-----GKLPTQVPMEYN 4208



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 85/196 (43%), Gaps = 17/196 (8%)

Query: 49   RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
            ++  L G  +  +A G      + +  +   ++WG  + G+LG G       P  +  L+
Sbjct: 4008 KVEALQGYRVIDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLT 4067

Query: 109  KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
               + K   G   +V +T+ G    +G   + +LG GS  +   P  V+ L   +V A A
Sbjct: 4068 GLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIA 4127

Query: 168  CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
             G+   V     E   +   G    GQLG GT N              A  RPR +AAL 
Sbjct: 4128 TGSLHCV--CCTEDGEVYTWGDNDEGQLGDGTTN--------------AIQRPRLVAALQ 4171

Query: 228  GETIVKVACGTNHTVA 243
            G+ I +VACG+ HT+A
Sbjct: 4172 GKKINRVACGSAHTLA 4187



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 41   DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
            D ++  P  +  L G  I  VA G +  HC+AV   G+ Y WG N+ GQ G+G      +
Sbjct: 3243 DVHVRKPQVVEGLRGKKIVHVAVGAL--HCLAVTDTGQVYAWGDNDHGQQGNGTTTVNRK 3300

Query: 101  PTIVSELSKYKIKKAGAGRSHTVVVT 126
            PT+V  L   KI +   G SH+V  T
Sbjct: 3301 PTLVQGLEGQKITRVACGSSHSVAWT 3326



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/257 (23%), Positives = 107/257 (41%), Gaps = 33/257 (12%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  KM+   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDQTIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  V+ G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 596 MLVTGLKGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
               + K   G   +V +T+DG   ++G   + +LG G+  +   P  +  L   +V   
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDV 715

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G+  T  L+  E + + + G            N+      ++++    +P P A+  L
Sbjct: 716 AAGS--THCLALTEDSEVHSWG-----------SNDQCQHFDTLRI---TKPEPTALPGL 759

Query: 227 AGETIVKVACGTNHTVA 243
             + IV +ACG   + A
Sbjct: 760 DTKHIVGIACGPAQSFA 776



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   VA+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 657 DLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVVDVA 716

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 717 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRITKPEPTALPGLDTKHIVGIACGPAQSFA 776

Query: 175 WLSSVE 180
           W S  E
Sbjct: 777 WSSCSE 782



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 18/185 (9%)

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            A  G  I K + G      + +K  V+ WG     +LG  +     VP   +     NV+
Sbjct: 2939 ANTGSLIRKKSSGLESAATIRTK--VFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVV 2996

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------NGDDWMYPKPLMDLSGWNLR--C 335
                 ++ GS +       G++Y  G+  N       +      P+ +  LS + ++   
Sbjct: 2997 Q----VAGGSKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3052

Query: 336  MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
            + SG  H   +  D    SWG    G+LG+  + + +   P+ ++ L+   +  +ACG  
Sbjct: 3053 VHSGGRHAMALTVDGKVFSWGEGDDGKLGH--FSRMNCDKPRLIEALKTKRIRDIACGSS 3110

Query: 395  HSLVI 399
            HS  I
Sbjct: 3111 HSAAI 3115



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 60/164 (36%), Gaps = 32/164 (19%)

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T++    G +Y WG    G+LG  E     VP   +       L P  +I       + T
Sbjct: 3948 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALA---ALRPIQLIGGEQTLFAVT 4004

Query: 301  AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-SWG 355
            A G    + G                       R +D    SG+       D   + SWG
Sbjct: 4005 ADGKVEALQG----------------------YRVIDIACGSGDAQTLCLTDDDTVWSWG 4042

Query: 356  HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
               YG+LG G  G     +P K+D L G+ V+ V CG   S+ +
Sbjct: 4043 DGDYGKLGRG--GSDGCKVPMKIDSLTGLGVVKVECGSQFSVAL 4084


>gi|182416055|ref|YP_001821121.1| cell surface receptor IPT/TIG domain-containing protein [Opitutus
           terrae PB90-1]
 gi|177843269|gb|ACB77521.1| cell surface receptor IPT/TIG domain protein [Opitutus terrae
           PB90-1]
          Length = 1848

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 166/354 (46%), Gaps = 52/354 (14%)

Query: 79  CYTWGRNERGQLGHGD----------KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            Y WG N +GQLG+G            +  DR  +++   K  +  A + R H++ +  D
Sbjct: 134 SYAWGDNSKGQLGNGTGGSMGNKSVVPVAADRSGVLA--GKTLVALATSYR-HSLALASD 190

Query: 129 GNSLAFGWNKHGQLGSGS--IRNEIEPSPVRCLVS------EVTATACGADFTVWLSSVE 180
           G   A+G+N +GQLG+GS  +  +I   PV   ++       + A A G + ++ L+S +
Sbjct: 191 GTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEHSLALAS-D 249

Query: 181 GASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           G  I+ A G    GQLG G     +T DS V +A +          L G+T+V +A G N
Sbjct: 250 G--IVYAWGDNSEGQLGDG-----STTDSKVPMAVDRT------GVLTGKTVVAIAAGRN 296

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H++AV S G VY WG   Y +LG     D  VP  VD+ +        A ++ G  +S  
Sbjct: 297 HSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTELAG--KSVADVAGGDRHSLA 354

Query: 300 TAGGGQLYMWGKLKNN--GDDWMYPKPL-------MDLSGWNLRCMDSGNMHHF-VGADS 349
            A  G +Y WG   N   GD   + KP          L+G  +  + +G  H+  + +D 
Sbjct: 355 QASDGTVYAWGDNTNGQMGDTIAHLKPAPVSVTGGSALAGKTIVAVAAGGYHNLALASDG 414

Query: 350 SCISWGHAQYGELGYGPYGQ-KSSAMPKKVD---ILEGMHVISVACGYGHSLVI 399
           +  +WG+   G+LG    G  + S +P  V+    L G  +++V  G  HSL +
Sbjct: 415 TVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHSLAL 468



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 83/298 (27%), Positives = 124/298 (41%), Gaps = 41/298 (13%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--SE 106
           R   L G  +  +AAG    H +AV  +G  Y WG N   QLG G       P  V  +E
Sbjct: 279 RTGVLTGKTVVAIAAG--RNHSLAVASDGTVYAWGDNYYAQLGDGSLTDSSVPVPVDLTE 336

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---- 162
           L+   +     G  H++    DG   A+G N +GQ+G       ++P+PV          
Sbjct: 337 LAGKSVADVAGGDRHSLAQASDGTVYAWGDNTNGQMGD--TIAHLKPAPVSVTGGSALAG 394

Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             + A A G    + L+S    ++   G    GQLG+ +      + S+V +A  +    
Sbjct: 395 KTIVAVAAGGYHNLALAS--DGTVCTWGYNYNGQLGNNSSGA--GEKSTVPIAVNSY--- 447

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD---- 276
               AL G+TIV V  G +H++A+ S G + TWGF   G+LG     +  VP  V     
Sbjct: 448 ---GALPGKTIVAVGAGVSHSLALASDGALCTWGFNSQGQLGDNSTTNRTVPVTVSAGGL 504

Query: 277 VFQR-------------NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
           +FQ                V PP   I+A S +   T GG  + + G   +     M+
Sbjct: 505 MFQALGTTCDAVYSLALATVPPPT--ITAVSPSRGLTTGGASVVITGTNFSGASAVMF 560



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 138/321 (42%), Gaps = 43/321 (13%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGD-KIQRD---RPTIVSE---LSKYKIKKAGAGRSH 121
           H +A+  +G  Y WG N  GQLG+G   +  D    P  V     L+   I     G  H
Sbjct: 183 HSLALASDGTVYAWGYNANGQLGNGSGGLSTDISKVPVAVDMTGVLAGKTIIAIATGYEH 242

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLV---SEVTATACGADFTVWLS 177
           ++ +  DG   A+G N  GQLG GS  +   P  V R  V     V A A G + ++ ++
Sbjct: 243 SLALASDGIVYAWGDNSEGQLGDGSTTDSKVPMAVDRTGVLTGKTVVAIAAGRNHSLAVA 302

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           S    ++   G   Y QLG G     +  DSSV       P P  +  LAG+++  VA G
Sbjct: 303 S--DGTVYAWGDNYYAQLGDG-----SLTDSSV-------PVPVDLTELAGKSVADVAGG 348

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
             H++A  S G VY WG    G++G      +  P  V      + L  + +  ++AG  
Sbjct: 349 DRHSLAQASDGTVYAWGDNTNGQMGDTIAHLKPAPVSV---TGGSALAGKTIVAVAAGGY 405

Query: 296 NSSCTAGGGQLYMW-----GKLKNN----GDDWMYPKPLMD---LSGWNLRCMDSGNMHH 343
           ++   A  G +  W     G+L NN    G+    P  +     L G  +  + +G  H 
Sbjct: 406 HNLALASDGTVCTWGYNYNGQLGNNSSGAGEKSTVPIAVNSYGALPGKTIVAVGAGVSHS 465

Query: 344 F-VGADSSCISWGHAQYGELG 363
             + +D +  +WG    G+LG
Sbjct: 466 LALASDGALCTWGFNSQGQLG 486


>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
          Length = 328

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 133/292 (45%), Gaps = 21/292 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G++  CG      +G   G   G +  P ++  L    ++ VA      H  A+ V+G+ 
Sbjct: 49  GKVYACGEATNGRLGL--GISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKV 106

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG  + G+LGH  ++  D+P ++  L   +I+    G SH+  +T  G    +G  ++
Sbjct: 107 FWWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGELYTWGLGEY 166

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G    +++P  V+ L+   V   ACG+     L+  +   + + G   +G+LG G
Sbjct: 167 GRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRG 226

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N               P+ I  L G+ + ++ CG   ++A+   G V+TWG G Y
Sbjct: 227 GSEGCNI--------------PQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDY 272

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            RLGH        P+ V+  +   ++     ++ G+++       GQ+Y WG
Sbjct: 273 FRLGHGSDVHVRKPQVVEGLRGKKIVH----VAVGALHCLAVTDSGQVYAWG 320



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 152/340 (44%), Gaps = 36/340 (10%)

Query: 38  GALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DK 95
           G L G+ +  P+    L  +++  VA G  S    AV VEG+ Y  G    G+LG G   
Sbjct: 11  GGLKGSKIKVPSFSETLSALNVVQVAGGSKSL--FAVTVEGKVYACGEATNGRLGLGISS 68

Query: 96  IQRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                P  ++ LS Y +KK    +G  H   +T DG    +G    G+LG  S  N  +P
Sbjct: 69  GTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVFWWGEGDDGKLGHFSRMNCDKP 128

Query: 154 SPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
             +  L ++ +   ACG+  +  L+S     +   GL +YG+LGHG DN           
Sbjct: 129 RLIEALKTKRIRDIACGSSHSAALTS--SGELYTWGLGEYGRLGHG-DN----------- 174

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
               Q +P+ +  L G  +++VACG+    T+A+  +G V++WG G +G+LG    +   
Sbjct: 175 --TTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCN 232

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKP-- 324
           +P+ ++      V      I  G+  S      G ++ WGK       +G D    KP  
Sbjct: 233 IPQNIERLNGQGVCQ----IECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRKPQV 288

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELG 363
           +  L G  +  +  G +H     DS  + +WG   +G+ G
Sbjct: 289 VEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQG 328



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/277 (26%), Positives = 113/277 (40%), Gaps = 31/277 (11%)

Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           +G N   QLG         PS    L +       G   +++  +VEG  +   G    G
Sbjct: 2   WGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEG-KVYACGEATNG 60

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVY 251
           +LG G             ++    P PR I AL+   + KVA   G  H  A+   G V+
Sbjct: 61  RLGLG-------------ISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVF 107

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            WG G  G+LGH  + +   PR ++  +   +      I+ GS +S+     G+LY WG 
Sbjct: 108 WWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRD----IACGSSHSAALTSSGELYTWGL 163

Query: 312 LK----NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFVGADSSCI-SWGHAQYGEL 362
            +     +GD+    KP M       R +     S +       D   + SWG   +G+L
Sbjct: 164 GEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKL 223

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G G  G +   +P+ ++ L G  V  + CG   SL +
Sbjct: 224 GRG--GSEGCNIPQNIERLNGQGVCQIECGAQFSLAL 258


>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
 gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
           [Clostridium sp. BNL1100]
          Length = 985

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 101/362 (27%), Positives = 170/362 (46%), Gaps = 55/362 (15%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDV 75
           E  G +  CG   +  +G        N +      P+ G++ +  ++AG    + +A+  
Sbjct: 191 ESDGTVWACGENDYGQLGNN------NTIDINSPIPVEGLNKVSSISAG--KYYSMALKS 242

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           +G  +TWG N+ GQLG G    R  P  V  LS   I    +G SH++ + +DG   A+G
Sbjct: 243 DGTVWTWGENDYGQLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLALKDDGTVWAWG 300

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            N+ GQLG G+  ++  PS V+ L S + + +CG  +++ L +    ++   G    GQL
Sbjct: 301 DNESGQLGDGTTNSKYIPSQVQGL-SGIVSISCGFYYSMALKN--DGTVWVWGDNTSGQL 357

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G GT  + NT          A P    ++ L G  ++ +ACG NH++A+ + G V+TWGF
Sbjct: 358 GDGTTTDRNT----------AVP----VSGLDG--VIAIACGVNHSMALRNDGTVWTWGF 401

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-----ISAGSVNSSCTAGGGQLYMWG 310
             +G+LG   +             +N  +P   +     I+ G+ +S      G ++ WG
Sbjct: 402 NAFGQLGDGTK-----------VSKNTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWG 450

Query: 311 KLK----NNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
             +     NG       P  + +LSG  ++ +  G    F +  D +  +WG+ +YGELG
Sbjct: 451 DNQYGQLGNGTFISNTTPSQVSNLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELG 508

Query: 364 YG 365
            G
Sbjct: 509 KG 510



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 164/352 (46%), Gaps = 35/352 (9%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           DG  VS     P+ G+D   +A  C + H +A+  +G  + WG N+ GQLG+G  I    
Sbjct: 409 DGTKVSKNTAVPISGLD-GIIAITCGTSHSMALKDDGTVWAWGDNQYGQLGNGTFISNTT 467

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P+ VS LS   IK    G S +  +  DG   A+G N++G+LG G     I P+     +
Sbjct: 468 PSQVSNLSG--IKSIFCGYSTSFALKPDGTVWAWGNNEYGELGKGFTTRVIYPTETLN-I 524

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
            ++ A + G+   + L +    ++   G  +YGQLG GT        +++K        P
Sbjct: 525 GDIKAISIGSSHCLALKN--DGTVWAWGDNRYGQLGDGT--------TTIK------SLP 568

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
             ++ ++G  I  ++ G +H++A+ S G V+ WG    G+LG   ++D   P +V     
Sbjct: 569 VQVSGISG--ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQV----- 621

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPKPLMDLSGWNLRCMDS 338
            + L    VIS     S      G +++WG    N   +    P  +  LSG  +  ++ 
Sbjct: 622 -SELSGITVISNCIYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSG--IIAIEC 678

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
           G  H+  +  D +  +WG   +G+ G G     ++ +P +V  L G+  I+V
Sbjct: 679 GTYHNLALKNDGTVWAWGKNNFGQFGDGT--TTTTNIPVQVSGLSGVKAIAV 728



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 152/344 (44%), Gaps = 50/344 (14%)

Query: 68  CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
            H +A++ +G  +  G N+ GQLG+ + I  + P  V  L+  K+    AG+ +++ +  
Sbjct: 185 SHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGLN--KVSSISAGKYYSMALKS 242

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G N +GQLG G+    + P  V+ L S + A + G   ++ L   +  ++   
Sbjct: 243 DGTVWTWGENDYGQLGDGTTATRLSPVQVQNL-SGIIAISSGNSHSLALK--DDGTVWAW 299

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G  + GQLG GT N              ++  P  +  L+G  IV ++CG  +++A+ + 
Sbjct: 300 GDNESGQLGDGTTN--------------SKYIPSQVQGLSG--IVSISCGFYYSMALKND 343

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-----ISAGSVNSSCTAG 302
           G V+ WG    G+LG     D           RN  +P   +     I+ G  +S     
Sbjct: 344 GTVWVWGDNTSGQLGDGTTTD-----------RNTAVPVSGLDGVIAIACGVNHSMALRN 392

Query: 303 GGQLYMWG--KLKNNGDDWMYPK----PLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWG 355
            G ++ WG       GD     K    P+  L G  +  +  G  H     D   + +WG
Sbjct: 393 DGTVWTWGFNAFGQLGDGTKVSKNTAVPISGLDG--IIAITCGTSHSMALKDDGTVWAWG 450

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             QYG+LG G +   S+  P +V  L G+   S+ CGY  S  +
Sbjct: 451 DNQYGQLGNGTF--ISNTTPSQVSNLSGIK--SIFCGYSTSFAL 490



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 147/357 (41%), Gaps = 61/357 (17%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           DI+ ++ G  S HC+A+  +G  + WG N  GQLG G    +  P  VS +S   I    
Sbjct: 526 DIKAISIG--SSHCLALKNDGTVWAWGDNRYGQLGDGTTTIKSLPVQVSGIS--GITAIS 581

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-------G 169
           AG SH++ +  DG   A+G N  GQLG G+  +   P  V  L      + C        
Sbjct: 582 AGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSFALK 641

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
            D TVW+                     G+D        S  L  E    P  I+ L+G 
Sbjct: 642 NDGTVWV--------------------WGSD--------SYNLPLEKMTMPIQISGLSG- 672

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I+ + CGT H +A+ + G V+ WG   +G+ G        +P +V      + L     
Sbjct: 673 -IIAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQV------SGLSGVKA 725

Query: 290 ISAGSVNSSCTAGGGQLYMWGKL-----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
           I+ G   S      G ++ WG++      +  + W   + +  LS      + S + +  
Sbjct: 726 IAVGGNRSIALKSDGTVWQWGRILVSVSPSTVETWTTARQVDGLSE-----IVSISNNVA 780

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           +  D    +WG   YG+LG G    + +  P  V  LEG  V  VA     S+V+++
Sbjct: 781 LKNDGKVFTWGANDYGQLGDGTTTARVTVAP--VSGLEG--VAGVASSDTTSMVLMN 833



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 82/297 (27%), Positives = 139/297 (46%), Gaps = 38/297 (12%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
           I K   G SHT+ +  DG   A G N +GQLG+ +  +   P PV  L ++V++ + G  
Sbjct: 177 IIKVSGGESHTLALESDGTVWACGENDYGQLGNNNTIDINSPIPVEGL-NKVSSISAGKY 235

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
           +++ L S    ++   G   YGQLG GT        ++ +L+      P  +  L+G  I
Sbjct: 236 YSMALKS--DGTVWTWGENDYGQLGDGT--------TATRLS------PVQVQNLSG--I 277

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           + ++ G +H++A+   G V+ WG    G+LG      +++P +V        L     IS
Sbjct: 278 IAISSGNSHSLALKDDGTVWAWGDNESGQLGDGTTNSKYIPSQVQ------GLSGIVSIS 331

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
            G   S      G +++WG   +   GD    D     P+  L G  +  +  G  H   
Sbjct: 332 CGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTAVPVSGLDG--VIAIACGVNHSMA 389

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           +  D +  +WG   +G+LG G    K++A+P  +  L+G  +I++ CG  HS+ + D
Sbjct: 390 LRNDGTVWTWGFNAFGQLGDGTKVSKNTAVP--ISGLDG--IIAITCGTSHSMALKD 442



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 97/230 (42%), Gaps = 31/230 (13%)

Query: 28  TCWDAVGRRKGAL-DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
           T W     R G L DG     +    + G+  I  ++AG    H +A+  +G  + WG+N
Sbjct: 545 TVWAWGDNRYGQLGDGTTTIKSLPVQVSGISGITAISAG--GSHSLALKSDGTVWAWGQN 602

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
             GQLG G K  R+ P  VSELS   +      RS    +  DG    +G + +      
Sbjct: 603 NVGQLGDGTKEDRNTPVQVSELSGITVISNCIYRSF--ALKNDGTVWVWGSDSY------ 654

Query: 146 SIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           ++  E    P++   +S + A  CG    + L +    ++   G   +GQ G GT    N
Sbjct: 655 NLPLEKMTMPIQISGLSGIIAIECGTYHNLALKN--DGTVWAWGKNNFGQFGDGTTTTTN 712

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
                          P  ++ L+G  +  +A G N ++A+ S G V+ WG
Sbjct: 713 I--------------PVQVSGLSG--VKAIAVGGNRSIALKSDGTVWQWG 746



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/231 (25%), Positives = 90/231 (38%), Gaps = 46/231 (19%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           +  P ++  L G+    +A  C + H +A+  +G  + WG+N  GQ G G     + P  
Sbjct: 661 MTMPIQISGLSGI----IAIECGTYHNLALKNDGTVWAWGKNNFGQFGDGTTTTTNIPVQ 716

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
           VS LS  K    G  RS  + +  DG    + W        G I   + PS V     E 
Sbjct: 717 VSGLSGVKAIAVGGNRS--IALKSDGT--VWQW--------GRILVSVSPSTV-----ET 759

Query: 164 TATACGADFTVWLSSVEG-------ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
             TA   D    + S+           +   G   YGQLG GT     T           
Sbjct: 760 WTTARQVDGLSEIVSISNNVALKNDGKVFTWGANDYGQLGDGTTTARVT----------- 808

Query: 217 QPRPRAIAALAG-ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                 +A ++G E +  VA     ++ + + G +  WG   +G+LG+ E+
Sbjct: 809 ------VAPVSGLEGVAGVASSDTTSMVLMNDGTIRAWGKNNFGQLGNGER 853


>gi|393214209|gb|EJC99702.1| RCC1/BLIP-II [Fomitiporia mediterranea MF3/22]
          Length = 472

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 146/327 (44%), Gaps = 31/327 (9%)

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           +R  P ++          A  GRSHT++V  +G+    G N  GQ G    + +    P 
Sbjct: 19  RRLTPQMLGASKGVTFVHAAVGRSHTLLVGSNGDVWTAGANSLGQCG----QPQCPEVPT 74

Query: 157 RCLV---------SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
             L+          ++     G +F++ L+  E   +   G  ++GQLG+G   E+    
Sbjct: 75  FTLIRGPWPNGEKEKIVKVGAGINFSMLLT--ESGKLYALGSGEHGQLGNGRTGEHIATG 132

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           +  K  ++    P  +  L G+ I +++CG  H++A+D  G VY WG+ GY RLG   Q+
Sbjct: 133 N--KTMFDVFSTPVLVKGLEGKHITQISCGHQHSIALDKDGIVYVWGYNGYCRLGLGNQQ 190

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-----DWMYP 322
           D  VP+ V  F   N +     ++AG  NS         YM GK KN+G+      +   
Sbjct: 191 DVLVPKAVPQFSGPNEISRGVFVAAGPSNSIVIDRQKMYYMAGKWKNSGEGSSGSPYSSF 250

Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADSS--------CISWG-HAQYGELGYGPYGQKSSA 373
           + + DL G  +    SG + HF  A            +++G +A   ELG+G    KS+ 
Sbjct: 251 RYIQDLMGCKIYRACSGGVTHFALAPDEEATDGGVMTVAFGQNAANWELGFGASEPKSAT 310

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIV 400
            P +  +L G+ VI +A     +L + 
Sbjct: 311 KPTRHQLLIGIDVIDIAASQNTTLFLA 337


>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2, isoform CRA_b [Homo sapiens]
          Length = 310

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 122/260 (46%), Gaps = 23/260 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G+ C   +G   G +  + + P RL  L G  I  ++ G    H V    EG  +
Sbjct: 66  EIFVLGTNCCGCLGL--GDVQ-STIEPRRLDSLNGKKIACLSYG-SGPHIVLATTEGEVF 121

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           TWG N   QLG+G       P  I + LS  ++ +   G  H++V+T DG   A+G+N  
Sbjct: 122 TWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNS 181

Query: 140 GQLGSGSIRNEIEPSPVR-CLVSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL ++V  T ACG      ++ V+   +   G    GQLG 
Sbjct: 182 GQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQ--MCCMAVVDTGEVYVWGYNGNGQLGL 239

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                  QP P  +AAL G  + +VACG  HT+ +  +G VY WG   
Sbjct: 240 GNSGN--------------QPTPCRVAALQGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285

Query: 258 YGRLGHREQKDEWVPRRVDV 277
           YG+LG   + ++  P  V V
Sbjct: 286 YGQLGTGNKSNQSYPTPVTV 305



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/290 (25%), Positives = 130/290 (44%), Gaps = 30/290 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 35  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEIFVLGTNCCGCLGLGDVQSTIEPRRLDS 94

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 95  LNGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 139

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 140 LVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTVNQPIPRRVT 199

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSG 330
              +N V+     I+ G +        G++Y+WG   N     G+    P P  +  L G
Sbjct: 200 GCLQNKVV---VTIACGQMCCMAVVDTGEVYVWGYNGNGQLGLGNSGNQPTPCRVAALQG 256

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
             ++ +  G  H  V  D   + +WG   YG+LG G    +S   P  V+
Sbjct: 257 IRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTVE 306


>gi|194748527|ref|XP_001956696.1| GF24453 [Drosophila ananassae]
 gi|190623978|gb|EDV39502.1| GF24453 [Drosophila ananassae]
          Length = 1058

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 154/333 (46%), Gaps = 34/333 (10%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ V       IK+   G  HT+ +T  G   A G N
Sbjct: 8   YCWGNTSHGQLGLGGIEDEQILTPSQVPWTPDSAIKQVACGHRHTLFLTSSGRVYACGSN 67

Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            H QLG    + R  + P  +  +V ++   ACG+  ++ LS  E   +L+ G    GQL
Sbjct: 68  DHSQLGHDLPTKRPLLIPELLDYVVVQI---ACGSRHSMALS--EWGQVLSWGDNDCGQL 122

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  TD +       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+WG 
Sbjct: 123 GQATDQDI------VQL-------PKIVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
             YG+LG    K+  V       +   +L  P A I+ G  +S   +    ++ WG+   
Sbjct: 170 NIYGQLGVNTPKE--VTHSNQPVRLTTLLGIPVAAIACGGNHSFIISKSSAVFGWGRNNC 227

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPY 367
                N+     YP  L  L    +R +  G+    F+  +    + G   YG+LG+G +
Sbjct: 228 GQLGLNDETSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG-F 286

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G  +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 287 G-ANEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 122/251 (48%), Gaps = 30/251 (11%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           G+   A D ++V  P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG 
Sbjct: 120 GQLGQATDQDIVQLPKIVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 93  G---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSI 147
               +    ++P  ++ L    +     G +H+ ++++  +S  FGW  N  GQLG    
Sbjct: 178 NTPKEVTHSNQPVRLTTLLGIPVAAIACGGNHSFIISK--SSAVFGWGRNNCGQLGLNDE 235

Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNT 205
            +   P+ ++ L +  V   ACG +F+V+L++  G     AG   YGQLGHG   NE   
Sbjct: 236 TSRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFGANEM-- 291

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHR 264
                         PR +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R
Sbjct: 292 -------------LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGTR 338

Query: 265 EQKDEWVPRRV 275
             K   +P+ V
Sbjct: 339 STKSLTLPQVV 349



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 34/370 (9%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           G EL   G+T    +G   G  D  +++P+++       I+ VA G    H + +   GR
Sbjct: 4   GTELYCWGNTSHGQLGL-GGIEDEQILTPSQVPWTPDSAIKQVACG--HRHTLFLTSSGR 60

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            Y  G N+  QLGH   +   RP ++ EL  Y + +   G  H++ ++E G  L++G N 
Sbjct: 61  VYACGSNDHSQLGH--DLPTKRPLLIPELLDYVVVQIACGSRHSMALSEWGQVLSWGDND 118

Query: 139 HGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            GQLG  + ++ ++ P  VR LVS+ V   ACG + ++ L+S     + + G   YGQLG
Sbjct: 119 CGQLGQATDQDIVQLPKIVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQLG 176

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
             T  E    +  V+L             L G  +  +ACG NH+  +     V+ WG  
Sbjct: 177 VNTPKEVTHSNQPVRL-----------TTLLGIPVAAIACGGNHSFIISKSSAVFGWGRN 225

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGK 311
             G+LG  ++     P ++   +   V      ++ G   S      G ++      +G+
Sbjct: 226 NCGQLGLNDETSRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQ 281

Query: 312 LKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYG 368
           L +  G + M P+ +M+L G  +  +  GN H    V +      +G    G+L  G   
Sbjct: 282 LGHGFGANEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQL--GTRS 339

Query: 369 QKSSAMPKKV 378
            KS  +P+ V
Sbjct: 340 TKSLTLPQVV 349


>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
           guttata]
          Length = 537

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/307 (28%), Positives = 144/307 (46%), Gaps = 32/307 (10%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G      + + + P +L  L G  I  ++ G    H V    +G  Y
Sbjct: 48  EVFVFGLNCSNCLGTGD---NQSTIVPKKLEALCGKKISSLSYGS-GPHVVLCTEDGEVY 103

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P  + + L   K+ +   G  H++ ++ DG+  A+G+N  
Sbjct: 104 AWGHNGYSQLGNGTTNQGITPVQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNC 163

Query: 140 GQLGSGSIRNEIEPSPVR---CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQ+GSGS  N+  P+P R   CL  + V   ACG   T  ++ V    +   G    GQL
Sbjct: 164 GQVGSGSTANQ--PTPRRVSNCLQGKIVVGIACGQ--TSSMAVVNNGEVYGWGYNGNGQL 219

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G +                Q  P  +AAL    ++++ACG  HT+A+  +G +Y WG 
Sbjct: 220 GLGNNGN--------------QLTPCRVAALHSVCVLQIACGYAHTLALTDEGLLYAWGA 265

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
             YG+LG   + ++  P ++ + ++  V+   A  SA +  S+     GQ+YMWG+ +  
Sbjct: 266 NTYGQLGTGNKSNQLSPVQI-MMEKERVVEIAACHSAHT--SAAKTQSGQVYMWGQCR-- 320

Query: 316 GDDWMYP 322
           G    +P
Sbjct: 321 GQSVTFP 327



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + +T       FG N    LG+G  ++ I P  +  
Sbjct: 17  TLLSPQEIASIRKACVFGTSANEAIYITHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 76

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++++ + G+   V L + +G  +   G   Y QLG+GT N+  T            
Sbjct: 77  LCGKKISSLSYGSGPHVVLCTEDG-EVYAWGHNGYSQLGNGTTNQGITP----------- 124

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+   G +Y WG+   G++G     ++  PRRV  
Sbjct: 125 --VQVCTNLLIKKVVEVACGSHHSMALSMDGDLYAWGYNNCGQVGSGSTANQPTPRRV-- 180

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
              +N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 181 ---SNCLQGKIVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 236

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V+
Sbjct: 237 HSVCVLQIACGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMMEKERVV 293

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 294 EIAACHSAHT 303


>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
           CCMP2712]
          Length = 308

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           RPL+          C   H +AV  +G  +TWGRN+ GQLGHGD      P  V  L K 
Sbjct: 45  RPLIYSMPSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKK 104

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPV-RCLVSEVTATAC 168
              KA AG  H++V+TE     AFG N  GQLG  S ++    P  V R   S V    C
Sbjct: 105 ICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSGVCHITC 164

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
           G   ++ L   E   + + G    GQLG G               Y + P P  +     
Sbjct: 165 GYSHSMALLKSE--QLYSWGRNDCGQLGLGH--------------YRSSPVPEHLTMFKK 208

Query: 229 ETIVKVACGTNHTVAVDSK---------GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
             + +++CG +H +A  S+           VYTWG G  G+LGH E     VP+ V    
Sbjct: 209 SQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLL 268

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDD 318
              +      ++AG  +S+      QLY WG  +     +GDD
Sbjct: 269 ARGI----RAVAAGGFSSAAIDEAKQLYTWGCSREGQLGHGDD 307



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 139/324 (42%), Gaps = 38/324 (11%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR------DRPTIVSELSKYKIKK 114
           V A C   H VA+  EGR Y+WG    G LGHG+   +      DRP I S  S   I  
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWG-CANGALGHGNSKSQLLPKALDRPLIYSMPS---ITT 56

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFT 173
              G  HT+ V +DG    +G N++GQLG G  +    P  V  L  ++    A G   +
Sbjct: 57  IACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHS 116

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + L+  E   +   G   +GQLG  +  +Y+               P  ++ L    +  
Sbjct: 117 LVLT--EANKVYAFGSNVFGQLGLESKVKYSAA-------------PDIVSRLRRSGVCH 161

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           + CG +H++A+     +Y+WG    G+LG    +   VP  + +F+++ V          
Sbjct: 162 ITCGYSHSMALLKSEQLYSWGRNDCGQLGLGHYRSSPVPEHLTMFKKSQVQQISCGYDHN 221

Query: 294 SVNSSCTAGGG-----QLYMWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMDSGNMH 342
               S  AG G     ++Y WG+ +    G D +Y    PK +  L    +R + +G   
Sbjct: 222 IAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLARGIRAVAAGGFS 281

Query: 343 H-FVGADSSCISWGHAQYGELGYG 365
              +       +WG ++ G+LG+G
Sbjct: 282 SAAIDEAKQLYTWGCSREGQLGHG 305



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 110/243 (45%), Gaps = 28/243 (11%)

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACG   TV L+  E   + + G    G LGHG        +S  +L  +A  RP   +  
Sbjct: 4   ACGKLHTVALT--EEGRVYSWGCAN-GALGHG--------NSKSQLLPKALDRPLIYSM- 51

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
              +I  +ACG  HT+AV   G ++TWG   YG+LGH + K   +PRRV+  ++   +  
Sbjct: 52  --PSITTIACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKA 109

Query: 287 EA-------VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
            A       +  A  V +  +   GQL +  K+K +      P  +  L    +  +  G
Sbjct: 110 AAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAA----PDIVSRLRRSGVCHITCG 165

Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H      S  + SWG    G+LG G Y  +SS +P+ + + +   V  ++CGY H++ 
Sbjct: 166 YSHSMALLKSEQLYSWGRNDCGQLGLGHY--RSSPVPEHLTMFKKSQVQQISCGYDHNIA 223

Query: 399 IVD 401
            V 
Sbjct: 224 FVS 226



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 14/183 (7%)

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV--LPPEAV 289
           V  ACG  HTVA+  +G VY+WG    G LGH   K + +P+ +D   R  +  +P    
Sbjct: 1   VGAACGKLHTVALTEEGRVYSWGCAN-GALGHGNSKSQLLPKALD---RPLIYSMPSITT 56

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMD--SGNMHH 343
           I+ G  ++      G L+ WG+ +     +GD   +  P    +     C+   +G  H 
Sbjct: 57  IACGEFHTLAVGQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKKICIKAAAGGQHS 116

Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
            V  +++ + ++G   +G+LG      K SA P  V  L    V  + CGY HS+ ++  
Sbjct: 117 LVLTEANKVYAFGSNVFGQLGL-ESKVKYSAAPDIVSRLRRSGVCHITCGYSHSMALLKS 175

Query: 403 TNV 405
             +
Sbjct: 176 EQL 178



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           P  ++ L+   IR VAAG  S    A+D   + YTWG +  GQLGHGD I
Sbjct: 261 PKVVQTLLARGIRAVAAGGFSS--AAIDEAKQLYTWGCSREGQLGHGDDI 308


>gi|392578984|gb|EIW72111.1| hypothetical protein TREMEDRAFT_72659 [Tremella mesenterica DSM
           1558]
          Length = 549

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 181/406 (44%), Gaps = 31/406 (7%)

Query: 20  GELLFCGSTCWD---AVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           G +L CGST W+      R K A   +L+ P  LR +  V    + +G  + +C+ +DV 
Sbjct: 20  GRVLICGSTTWNHNWKKDRGKDAAKSDLLEPHILRSICNVRAAEIISGSTANYCIVLDVF 79

Query: 77  GRCYTWGRNERGQLGHGDKIQRDR------PTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           G  Y +G+     L   + +  ++      PT V      +     A RSH  ++   G 
Sbjct: 80  GAAYLFGKLPVASLAPPNGLVSEQEPLKVSPTNVGLPRGSRWIAGSAARSHMFLIDSWGQ 139

Query: 131 SLAFGWNKHGQLG---SGSI-RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
               G N  GQ+G    G + +  + P P       +     G  F+++LS  +   +  
Sbjct: 140 VWGCGNNTMGQVGLPVCGEVSKFTLVPGPWSEAGDRIVQITAGNTFSLFLS--DKGQVYA 197

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
           AG  + GQLG+G   E   +    K +++ +P      ALAG  I ++A G+ H++A+D 
Sbjct: 198 AGSSEAGQLGNGRTGERVLRAG--KTSFDIEPPHLVEGALAGREIQRIASGSQHSLAMDK 255

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
           +GY Y WG+GGY RLG   QK+   P  +  F    +    AV+  G  +S        +
Sbjct: 256 EGYAYGWGYGGYSRLGLGSQKNVLTPTVLPAFAGKPLTRAMAVL-CGPASSMVITHQRVV 314

Query: 307 YMWGKLKNNGD-----DWMYPKPLMDLSGW-NLRCMDSGNMHHFVGADSS------CISW 354
           Y+ GK K  GD      +   KP+  L    N+     G   +F+ A +        I W
Sbjct: 315 YIAGKWKMTGDGSGGQPYTIFKPIEHLPQMSNIMSASCGGCTYFLTATAPETDKMMTIGW 374

Query: 355 GH-AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G    YGELG GP   KS ++P  ++ L+ + +  VA G  H+L +
Sbjct: 375 GQGVVYGELGMGPDRGKSQSIPTPIEPLDSIAIFDVAAGPFHTLFL 420


>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
 gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
          Length = 596

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 157/342 (45%), Gaps = 38/342 (11%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           YTWG    G LGHG+  Q   P +V  L    I+K   G +HT+ +++DG   ++G    
Sbjct: 210 YTWGEGTNGMLGHGEDTQEAHPHVVEALLGKDIRKVACGATHTLALSKDGEVFSWGSGYG 269

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT--VWLSSVEGASILNAGLPQYGQLG 196
           G+LG G +R+   P  +  L S  +T  AC    +  V   S +GA + + G   YGQLG
Sbjct: 270 GRLGQGHLRDRFTPIRICGLESLNLTQVACNEFHSAAVCACSKQGA-LFSFGENDYGQLG 328

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
              D    +               + +++L+   I +VACG+ H+ A+   G ++ WG  
Sbjct: 329 IPEDKLLTS-------------YIQCVSSLSEHKISRVACGSFHSAALAEHGSLWLWGCN 375

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWG---- 310
             G+LG+       +P    + +  N L  +AV  ++ G  +S+     G+++  G    
Sbjct: 376 ESGQLGNGNYTSTSLP---SLLEAGNDLRHDAVMEVACGDQHSAFITKKGRMFCCGDNTY 432

Query: 311 -----KLKNNGDDWM-YPKPLMDLSGWNLRCMD--SGNMHHFVGADSSCI-SWGHAQYGE 361
                 L +N DD + Y   +      + RC+    G+ H  V  D   I +WG  + G 
Sbjct: 433 GQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGR 492

Query: 362 LGYGPYGQKSSAMPKKVDI-LEGMHVISVACGYGHSLVIVDR 402
           LG+G    +   +P +++I +EG HV  V+CG  H+   V R
Sbjct: 493 LGHGDNLNRH--LPTEIEIGMEGKHVRGVSCGRAHTACTVTR 532



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 2/107 (1%)

Query: 18  KGGELLFCGSTCWDAVGRR-KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           K G +  CG   +  +G       D ++     +R  V  D R V   C   H   V   
Sbjct: 420 KKGRMFCCGDNTYGQLGAHLNDNQDDHVTYNVAVRVRVPTDFRCVHVACGDSHTAVVTDG 479

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHT 122
           G  +TWGR + G+LGHGD + R  PT I   +    ++    GR+HT
Sbjct: 480 GEIFTWGRGKGGRLGHGDNLNRHLPTEIEIGMEGKHVRGVSCGRAHT 526


>gi|432863195|ref|XP_004070017.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Oryzias latipes]
          Length = 397

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 153/359 (42%), Gaps = 62/359 (17%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           +TWG N  GQLG G    +  P +  VSEL    I+    G  HT V+TE G     G N
Sbjct: 11  HTWGANSYGQLGQGHAEDQLVPRLSGVSELQTKVIRVVRGGGGHTAVITEGGEVFVCGQN 70

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
             GQLG G   +             VT  ACG DF++ L+  EG  +L  G   +GQLG 
Sbjct: 71  HKGQLGIGHCADIATFQICPIFNQRVTDVACGWDFSLLLT--EGGRLLACGSNAFGQLGV 128

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G    +      V++ +              E IV VA G  H++AV+  G VY WG G 
Sbjct: 129 GETVTHIADPLLVEVRFH-------------EPIVSVAAGLRHSLAVNDSGCVYQWGNGL 175

Query: 258 YGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN- 314
           +  +  +E +  D+ + ++  V           ++ AGS +  C    G+L++WG  K+ 
Sbjct: 176 FSHVDDKEMRTGDKCLSQKKSV-----------LVKAGSAHCVCLTEEGELFLWGSNKHE 224

Query: 315 ---NGDDWM-YPKPLMD--LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG---- 363
                + ++  P PL    L+G  +  + SG  H     +S    +WG   YG+LG    
Sbjct: 225 QLGTSESFLPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLGRPNS 284

Query: 364 -------------YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
                         G    ++   P +V +L G   IS  CG  H+L +     VG+RL
Sbjct: 285 DSQTPEELLAGFITGTSQSRAVCCPAEVHVLRGATQIS--CGSEHNLAV-----VGDRL 336



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 84/381 (22%), Positives = 135/381 (35%), Gaps = 93/381 (24%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI-VSELSKYKIKKAGAGRSHTVVVTE 127
           H   +   G  +  G+N +GQLG G     D  T  +  +   ++     G   ++++TE
Sbjct: 54  HTAVITEGGEVFVCGQNHKGQLGIGHCA--DIATFQICPIFNQRVTDVACGWDFSLLLTE 111

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSE-VTATACGADFTVWLS-------- 177
            G  LA G N  GQLG G     I +P  V     E + + A G   ++ ++        
Sbjct: 112 GGRLLACGSNAFGQLGVGETVTHIADPLLVEVRFHEPIVSVAAGLRHSLAVNDSGCVYQW 171

Query: 178 --------------------SVEGASILNAG------LPQYGQLGHGTDNEYNTKDSSVK 211
                               S + + ++ AG      L + G+L     N++    +S  
Sbjct: 172 GNGLFSHVDDKEMRTGDKCLSQKKSVLVKAGSAHCVCLTEEGELFLWGSNKHEQLGTSE- 230

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
            ++   P P   + L GE +  V  G +H +A    G V+TWG G YG+LG R   D   
Sbjct: 231 -SFLPSPTPLRRSLLNGEKVSNVWSGWSHIIAQTESGRVFTWGRGDYGQLG-RPNSDSQT 288

Query: 272 PRRV-------DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
           P  +           R    P E  +  G+   SC                         
Sbjct: 289 PEELLAGFITGTSQSRAVCCPAEVHVLRGATQISC------------------------- 323

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
                         G+ H+        +SWG  ++G  G G   Q +   P    ++  +
Sbjct: 324 --------------GSEHNLAVVGDRLLSWGWNEHGMCGNGF--QTNVLHP---GLISNL 364

Query: 385 HVISVACGYGHSLVIVDRTNV 405
             + V CG GHS+ +  R  V
Sbjct: 365 RAVLVGCGAGHSMAVCTRITV 385



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 28/170 (16%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP--LVGVDIRFVAAGCVSCHCVAVDVEG 77
           GEL   GS   + +G  +  L     SPT LR   L G  +  V +G    H +A    G
Sbjct: 213 GELFLWGSNKHEQLGTSESFLP----SPTPLRRSLLNGEKVSNVWSGW--SHIIAQTESG 266

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVS----------------ELSKYK-IKKAGAGRS 120
           R +TWGR + GQLG  +   +    +++                E+   +   +   G  
Sbjct: 267 RVFTWGRGDYGQLGRPNSDSQTPEELLAGFITGTSQSRAVCCPAEVHVLRGATQISCGSE 326

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           H + V  D   L++GWN+HG  G+G   N + P  +  L        CGA
Sbjct: 327 HNLAVVGD-RLLSWGWNEHGMCGNGFQTNVLHPGLISNL--RAVLVGCGA 373


>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
 gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
          Length = 1044

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 159/335 (47%), Gaps = 42/335 (12%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTI-VSELSKY--KIKKAGAGRSHTVVVTEDGNSLAFGW 136
           Y WG    G+LG G  I+ D+    +    KY   + +   G +HTV++T+ G   + G 
Sbjct: 2   YCWGSTVHGELGLGG-IEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEVFSCGN 60

Query: 137 NKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N   QLG    R   +P  V  L    +T  +CG + T  L+  E   +   G   +GQL
Sbjct: 61  NDLDQLGHKKQRT--KPEKVEGLDFYRITKISCGGNHT--LAFNEWGQLFGWGSDSHGQL 116

Query: 196 G-HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           G +GT                 QP P+ I +LA   IV+++CG NH++A+ + G +Y+WG
Sbjct: 117 GFNGT----------------TQPLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWG 160

Query: 255 --FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
             + G   LG R + ++  P  +    ++ +  P A I+ GS +S   +  G +Y WGK 
Sbjct: 161 GNYDGQLGLGMRSEYEKQ-PTLI----KSLLGIPIAFIACGSNHSFALSKSGAIYGWGKN 215

Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYG 365
                  N+ ++ ++P  L  L    ++ +  G +   F+ AD    + G   YG+LG+G
Sbjct: 216 TYGQLGLNDEENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHG 275

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                +  +P+K+  L G  V  V+CG  H+L +V
Sbjct: 276 --STSNEILPRKIMELMGSTVTQVSCGKRHTLALV 308



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/211 (34%), Positives = 106/211 (50%), Gaps = 23/211 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
           P  ++ L    I  V   C   H +A+   G  Y+WG N  GQLG G + + ++ PT++ 
Sbjct: 126 PKIIKSLATFHI--VQISCGKNHSLALTNNGELYSWGGNYDGQLGLGMRSEYEKQPTLIK 183

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L    I     G +H+  +++ G    +G N +GQLG     N++ P+ ++ L S  V 
Sbjct: 184 SLLGIPIAFIACGSNHSFALSKSGAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRVK 243

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAI 223
             ACG DF+ +LS+  G     AG+  YGQLGHG T NE                 PR I
Sbjct: 244 YIACGEDFSAFLSADGGVFTCGAGM--YGQLGHGSTSNEI---------------LPRKI 286

Query: 224 AALAGETIVKVACGTNHTVA-VDSKGYVYTW 253
             L G T+ +V+CG  HT+A V S+G VY++
Sbjct: 287 MELMGSTVTQVSCGKRHTLALVPSRGRVYSF 317



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 125/262 (47%), Gaps = 30/262 (11%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDI-RFVAAGCVSCHCVAVDVE 76
           K GE+  CG+   D +G +K          T+   + G+D  R     C   H +A +  
Sbjct: 51  KSGEVFSCGNNDLDQLGHKKQR--------TKPEKVEGLDFYRITKISCGGNHTLAFNEW 102

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G+ + WG +  GQLG     Q   P I+  L+ + I +   G++H++ +T +G   ++G 
Sbjct: 103 GQLFGWGSDSHGQLGFNGTTQ-PLPKIIKSLATFHIVQISCGKNHSLALTNNGELYSWGG 161

Query: 137 NKHGQLGSGSIRNEIE--PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           N  GQLG G +R+E E  P+ ++ L+   +   ACG++ +  LS  +  +I   G   YG
Sbjct: 162 NYDGQLGLG-MRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALS--KSGAIYGWGKNTYG 218

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG   +              E +  P  +  L    +  +ACG + +  + + G V+T 
Sbjct: 219 QLGLNDE--------------ENKLHPTQLKTLRSIRVKYIACGEDFSAFLSADGGVFTC 264

Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
           G G YG+LGH    +E +PR++
Sbjct: 265 GAGMYGQLGHGSTSNEILPRKI 286



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/281 (27%), Positives = 133/281 (47%), Gaps = 29/281 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H V +   G  ++ G N+  QLGH  K QR +P  V  L  Y+I K   G +HT+   E 
Sbjct: 45  HTVMLTKSGEVFSCGNNDLDQLGH--KKQRTKPEKVEGLDFYRITKISCGGNHTLAFNEW 102

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNA 187
           G    +G + HGQLG       + P  ++ L +  +   +CG + ++ L++     + + 
Sbjct: 103 GQLFGWGSDSHGQLGFNGTTQPL-PKIIKSLATFHIVQISCGKNHSLALTN--NGELYSW 159

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    GQLG G  +EY             + +P  I +L G  I  +ACG+NH+ A+   
Sbjct: 160 GGNYDGQLGLGMRSEY-------------EKQPTLIKSLLGIPIAFIACGSNHSFALSKS 206

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G +Y WG   YG+LG  +++++  P ++   +   V      I+ G   S+  +  G ++
Sbjct: 207 GAIYGWGKNTYGQLGLNDEENKLHPTQLKTLRSIRV----KYIACGEDFSAFLSADGGVF 262

Query: 308 -----MWGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                M+G+L + +  + + P+ +M+L G  +  +  G  H
Sbjct: 263 TCGAGMYGQLGHGSTSNEILPRKIMELMGSTVTQVSCGKRH 303



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 42/177 (23%), Positives = 69/177 (38%), Gaps = 57/177 (32%)

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           + +V  G NHTV +   G V++ G     +LGH++Q+ +  P +V+      +      I
Sbjct: 36  VSQVTMGENHTVMLTKSGEVFSCGNNDLDQLGHKKQRTK--PEKVEGLDFYRI----TKI 89

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
           S G  ++      GQL+ W                                    G+DS 
Sbjct: 90  SCGGNHTLAFNEWGQLFGW------------------------------------GSDS- 112

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
                   +G+LG+    Q    +PK +  L   H++ ++CG  HSL +   TN GE
Sbjct: 113 --------HGQLGFNGTTQ---PLPKIIKSLATFHIVQISCGKNHSLAL---TNNGE 155


>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 752

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 170/380 (44%), Gaps = 47/380 (12%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           +A G+  GA +     P R+  + GV    VA      H +AV  +G  + WG N  GQL
Sbjct: 225 NASGQLGGAPEAAYPVPWRVEDVSGV----VAVAAGQYHSLAVRYDGTVWAWGDNLYGQL 280

Query: 91  GHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
           G G      R  P  V  L    +    AG  H++VV  DG   A+G N +GQLG GS  
Sbjct: 281 GDGKLEGNSRWLPKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGSRA 338

Query: 149 NEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           +    SPV+ L VS   A A G   ++ ++S    ++   G    GQ G GT   Y    
Sbjct: 339 HA--ASPVQVLGVSGAVAVAAGYRHSLVVNS--DGTLWAWGSNLDGQRGDGTLTRY---- 390

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
                     P P  +  L+G  +V VA G  H +A+ S G V+ WG    G+LG   + 
Sbjct: 391 ----------PTPGRVPGLSG--VVSVAAGGGHVLALLSDGTVWAWGDNASGQLGDGTRH 438

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MY 321
             WVPR+V        L     ++AGS  S      G ++ W     G+L +   D    
Sbjct: 439 SRWVPRQVP------ELSGVVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSV 492

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM-PKKVD 379
           P  + +LS   +  + +G+MH   V AD +   WG   YG+LG G  G  +    P +V 
Sbjct: 493 PLHVRELS--EVVAVAAGSMHALAVRADGTVWGWGFNDYGQLGDGFEGISARRYSPVQVP 550

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L GM  +SVA  +GHSL +
Sbjct: 551 GLSGM--VSVAADFGHSLAV 568



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 104/342 (30%), Positives = 153/342 (44%), Gaps = 46/342 (13%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +AV  +G  +T G N  GQLG G  + R  P  V  LS   +    AG  H++ +  D
Sbjct: 59  HSLAVRPDGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSG--VAAVAAGHGHSLALRYD 116

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N +GQLG  +  N   P  V  L S V +   G   +  L+     S+   G
Sbjct: 117 GTVWAWGNNAYGQLGDDTRDNRTVPVQVTGL-SGVVSVVAGDTHS--LAVRSDGSVWAWG 173

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLG GT ++              +  P  +  L+G  +V VA G NH++AV S G
Sbjct: 174 RNTSGQLGDGTRDD--------------RAVPVQVTGLSG--VVSVAAGGNHSLAVRSDG 217

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG    G+LG   +    VP RV+       +     ++AG  +S      G ++ 
Sbjct: 218 SVWAWGNNASGQLGGAPEAAYPVPWRVE------DVSGVVAVAAGQYHSLAVRYDGTVWA 271

Query: 309 W----------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHA 357
           W          GKL+ N   W+ PK +  L G  +  + +G  H   V +D +  +WG+ 
Sbjct: 272 WGDNLYGQLGDGKLEGN-SRWL-PKQVPGLGG--VVAVSAGFYHSLVVRSDGTVWAWGNN 327

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            YG+LG G     +S     V +L     ++VA GY HSLV+
Sbjct: 328 AYGQLGGGSRAHAAS----PVQVLGVSGAVAVAAGYRHSLVV 365



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 167/389 (42%), Gaps = 46/389 (11%)

Query: 28  TCWDAVGRRKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
           T W   G   G L DG  +S   P +++ L GV    VAAG    H +A+  +G  + WG
Sbjct: 68  TVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSGVAA--VAAG--HGHSLALRYDGTVWAWG 123

Query: 84  RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
            N  GQLG   +  R  P  V+ LS   +    AG +H++ V  DG+  A+G N  GQLG
Sbjct: 124 NNAYGQLGDDTRDNRTVPVQVTGLSG--VVSVVAGDTHSLAVRSDGSVWAWGRNTSGQLG 181

Query: 144 SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
            G+  +   P  V  L S V + A G + +  L+     S+   G    GQLG   +  Y
Sbjct: 182 DGTRDDRAVPVQVTGL-SGVVSVAAGGNHS--LAVRSDGSVWAWGNNASGQLGGAPEAAY 238

Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG- 262
                         P P  +  ++G  +V VA G  H++AV   G V+ WG   YG+LG 
Sbjct: 239 --------------PVPWRVEDVSG--VVAVAAGQYHSLAVRYDGTVWAWGDNLYGQLGD 282

Query: 263 -HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD 317
              E    W+P++V        L     +SAG  +S      G ++ WG         G 
Sbjct: 283 GKLEGNSRWLPKQVPG------LGGVVAVSAGFYHSLVVRSDGTVWAWGNNAYGQLGGGS 336

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
                 P+  L       + +G  H  V  +D +  +WG    G+ G G   +  +  P 
Sbjct: 337 RAHAASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNLDGQRGDGTLTRYPT--PG 394

Query: 377 KVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +V  L G  V+SVA G GH L ++    V
Sbjct: 395 RVPGLSG--VVSVAAGGGHVLALLSDGTV 421



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 113/389 (29%), Positives = 160/389 (41%), Gaps = 80/389 (20%)

Query: 41  DGNLV---SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           DG L    +P R+  L GV    VAAG    H +A+  +G  + WG N  GQLG G +  
Sbjct: 384 DGTLTRYPTPGRVPGLSGV--VSVAAG--GGHVLALLSDGTVWAWGDNASGQLGDGTRHS 439

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V ELS   +    AG S ++ V  DG+  ++G N +GQLG GS      P  VR
Sbjct: 440 RWVPRQVPELSG--VVAVAAGSSFSLAVRYDGSVWSWGDNAYGQLGHGSTDASSVPLHVR 497

Query: 158 CLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            L SEV A A G        AD TVW            G   YGQLG G +     + S 
Sbjct: 498 EL-SEVVAVAAGSMHALAVRADGTVW----------GWGFNDYGQLGDGFEGISARRYSP 546

Query: 210 VK-----------------LAYEAQ-----------------PRPRAIAAL---AGETIV 232
           V+                 LA  A                     R +  L   A  T+ 
Sbjct: 547 VQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPLRVNAPGTVA 606

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            ++ G N+++A+ + G ++ WG    G+LG        VP RV    R + L      +A
Sbjct: 607 LLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRASTL------AA 660

Query: 293 GSVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPKPLMDLSGWNLRCMD-SGNMHHFV 345
           G  +S      G L+ WG       GD  +     P  +  +SG  +  +D + N+   V
Sbjct: 661 GQSHSMAVGSDGFLWAWGFNFEGQLGDGTLTHHALPVRVPGMSG--VVAVDVTLNLSLAV 718

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAM 374
            +D S  +WG+   G+LG  P    ++A+
Sbjct: 719 RSDGSLWAWGNNDVGQLGTQPSTYVTTAV 747


>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
           PN500]
          Length = 1626

 Score =  110 bits (274), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 90/349 (25%), Positives = 149/349 (42%), Gaps = 42/349 (12%)

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           T+L P    + R +     + H   +   G+ +TWG  + G+LGHGD+     P  V  L
Sbjct: 123 TKLYP----EERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVAL 178

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLV---SE 162
           +   +K    G   T+ ++    S  + W  N+ GQLG G   ++    P    V     
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKR 238

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPR 221
           + A   GA     + S    ++   G   +G+LGHG T+N Y               +P 
Sbjct: 239 LVALDAGASRAAVIDS--SGALFTWGRGDHGRLGHGDTENRY---------------QPT 281

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQR 280
            +++L G  +V VA G  H++A+   G +++WG G  G+LGH   Q  +  P+++  F  
Sbjct: 282 LVSSLYGHVVVAVALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVD 341

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWM--YPKPLMDLSGWN 332
              +P    ISAG  +S      G +Y WG          + DD     P+ ++   G  
Sbjct: 342 ---MPKIIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIR 398

Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
            + +  G  H   + +D++  SWG    G L  G + +K+   P   +I
Sbjct: 399 FKTISCGFQHTVALTSDNTIYSWGCGLGGRL--GTFNEKNQCAPIACNI 445



 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 70/242 (28%), Positives = 121/242 (50%), Gaps = 22/242 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R VA    +     +D  G  +TWGR + G+LGHGD   R +PT+VS L  + +     G
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVVAVALG 297

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVS--EVTATACGADFTVW 175
             H++ +T+ G   ++G  ++GQLG GS ++ ++ P  ++  V   ++   + G   +V 
Sbjct: 298 GGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGYHSV- 356

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
            + ++  S+   G+  YG LG G     ++ D ++ +       P+ I    G     ++
Sbjct: 357 -AQLDDGSVYAWGMSDYGILGTG-----DSDDGAINI-------PQRILMPRGIRFKTIS 403

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG  HTVA+ S   +Y+WG G  GRLG   +K++  P   ++    N  P   V SAG +
Sbjct: 404 CGFQHTVALTSDNTIYSWGCGLGGRLGTFNEKNQCAPIACNI---PNYQP--VVFSAGEI 458

Query: 296 NS 297
           ++
Sbjct: 459 ST 460



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 26/305 (8%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           +I    AG +H  ++++ G    +G  ++G+LG G   +   P  V  L +  +    CG
Sbjct: 130 RIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALANIPMKYVFCG 189

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
              T+ LS   G+ +   G  ++GQLG G     +  D    L       P ++A    +
Sbjct: 190 GRSTIALSHTAGSGLYTWGNNEFGQLGRG-----DCGDDFTCL-------PESVAVPGAK 237

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +V +  G +    +DS G ++TWG G +GRLGH + ++ + P  V     + V+     
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENRYQPTLVSSLYGHVVV----A 293

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           ++ G  +S      G+L+ WG+ +N            + PK L            S   +
Sbjct: 294 VALGGGHSLALTKAGELFSWGRGENGQLGHGSYQSQQLAPKQLQFFVDMPKIIGISAGGY 353

Query: 343 HFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           H V    D S  +WG + YG LG G     +  +P+++ +  G+   +++CG+ H++ + 
Sbjct: 354 HSVAQLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRILMPRGIRFKTISCGFQHTVALT 413

Query: 401 DRTNV 405
               +
Sbjct: 414 SDNTI 418



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 77/285 (27%), Positives = 122/285 (42%), Gaps = 29/285 (10%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           GR     + ++ +P ++  L  + +++V  G  S   ++       YTWG NE GQLG G
Sbjct: 159 GRLGHGDEESISTPKQVVALANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEFGQLGRG 218

Query: 94  DKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
           D    D    P  V+     ++    AG S   V+   G    +G   HG+LG G   N 
Sbjct: 219 D-CGDDFTCLPESVAVPGAKRLVALDAGASRAAVIDSSGALFTWGRGDHGRLGHGDTENR 277

Query: 151 IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            +P+ V  L    V A A G   ++ L+  +   + + G  + GQLGHG+   Y ++  +
Sbjct: 278 YQPTLVSSLYGHVVVAVALGGGHSLALT--KAGELFSWGRGENGQLGHGS---YQSQQLA 332

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
            K        P+         I+ ++ G  H+VA    G VY WG   YG LG  +  D 
Sbjct: 333 PKQLQFFVDMPK---------IIGISAGGYHSVAQLDDGSVYAWGMSDYGILGTGDSDDG 383

Query: 270 WVPRRVDVFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWG 310
                +++ QR  +L P  +    IS G  ++        +Y WG
Sbjct: 384 ----AINIPQR--ILMPRGIRFKTISCGFQHTVALTSDNTIYSWG 422



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 58/190 (30%), Positives = 90/190 (47%), Gaps = 20/190 (10%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           E I+ V  G  H   +   G ++TWG G YGRLGH +++    P++V        +P + 
Sbjct: 129 ERIILVNAGAAHIAMISQSGKLFTWGEGQYGRLGHGDEESISTPKQVVALAN---IPMKY 185

Query: 289 VISAG--SVNSSCTAGGGQLYMWGKLK-------NNGDDWM-YPKPLMDLSGWNLRCMDS 338
           V   G  ++  S TAG G LY WG  +       + GDD+   P+ +       L  +D+
Sbjct: 186 VFCGGRSTIALSHTAGSG-LYTWGNNEFGQLGRGDCGDDFTCLPESVAVPGAKRLVALDA 244

Query: 339 G-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G +    + +  +  +WG   +G LG+G    ++   P  V  L G  V++VA G GHSL
Sbjct: 245 GASRAAVIDSSGALFTWGRGDHGRLGHG--DTENRYQPTLVSSLYGHVVVAVALGGGHSL 302

Query: 398 VIVDRTNVGE 407
            +   T  GE
Sbjct: 303 AL---TKAGE 309


>gi|442629373|ref|NP_001261249.1| CG9153, isoform C [Drosophila melanogaster]
 gi|323301230|gb|ADX35957.1| LD13353p [Drosophila melanogaster]
 gi|440215116|gb|AGB93944.1| CG9153, isoform C [Drosophila melanogaster]
          Length = 1062

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 150/338 (44%), Gaps = 39/338 (11%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T  G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
            + QLG          SP   L+ E     +    CG+  ++ LS  +   +L+ G    
Sbjct: 68  DYSQLGHDLPTKRPRMSPF-LLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDNDC 124

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLGH TD E       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+
Sbjct: 125 GQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 171

Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           WG   YG+LG     D      P R+       +  P A I+ G  +S   +  G ++ W
Sbjct: 172 WGSNIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 227

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
           G+        N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+L
Sbjct: 228 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 287

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+G     +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 288 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 323



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 26/249 (10%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
           G+   A D  +V  P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG 
Sbjct: 125 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 182

Query: 92  --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
               D    + P  ++ L    +     G +H+ ++++ G    +G N  GQLG     N
Sbjct: 183 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 242

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKD 207
              P+ ++ L +  V   ACG +F+V+L++  G     AG   YGQLGHG + NE     
Sbjct: 243 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---- 296

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQ 266
                       PR +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  
Sbjct: 297 -----------LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 345

Query: 267 KDEWVPRRV 275
           K   +P+ V
Sbjct: 346 KSLMLPQVV 354



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 169/374 (45%), Gaps = 36/374 (9%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            G+ L+C GST    +G   G  D  +++P+++       ++ VA G    H + +   G
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTATG 59

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPT---IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           + Y  G N+  QLGH    +R R +   ++ EL  Y I +   G  H++ +++ G  L++
Sbjct: 60  KVYACGSNDYSQLGHDLPTKRPRMSPFLLIPELQDYVIIQICCGSRHSLALSDWGQVLSW 119

Query: 135 GWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQY 192
           G N  GQLG  + +  ++ P  VR LV++ V   ACG + ++ L+S     + + G   Y
Sbjct: 120 GDNDCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC--GELYSWGSNIY 177

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG  + N+    +            P  +  L G  +  +ACG NH+  +   G V+ 
Sbjct: 178 GQLGVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFG 226

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM---- 308
           WG    G+LG  ++ +   P ++   +   V      ++ G   S      G ++     
Sbjct: 227 WGRNNCGQLGLNDETNRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAG 282

Query: 309 -WGKLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGY 364
            +G+L +    + M P+ +M+L G  +  +  GN H    V +     ++G    G+L  
Sbjct: 283 AYGQLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL-- 340

Query: 365 GPYGQKSSAMPKKV 378
           G    KS  +P+ V
Sbjct: 341 GTRSTKSLMLPQVV 354


>gi|403361228|gb|EJY80312.1| hypothetical protein OXYTRI_22298 [Oxytricha trifallax]
          Length = 855

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 163/391 (41%), Gaps = 71/391 (18%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSK----YKIKK 114
           FV       H + ++  G  +++G   +GQ+G G K I   +PT +   S      KIKK
Sbjct: 88  FVQVEAGLSHTLLLNRRGEVFSFGEGLQGQVGIGQKTIHLQKPTQLYLESGAKECQKIKK 147

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRC--------------- 158
             A   ++   ++ G    +G  + G+LG S  IR+++EP  V                 
Sbjct: 148 ISASGFNSAAFSKTGRLWVWGGTQRGKLGLSQMIRDQLEPLNVEFEVQNKEKENGIETQL 207

Query: 159 ----------------LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
                            ++E  A + G D  + L   +   + + G  +YG+LGHG + +
Sbjct: 208 EVFLDENKNHKKINTEYITEFEAVSWGIDHFLLLD--KKKRVFSTGFAKYGRLGHGDERD 265

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                         + +P  I  L G+ IV + CG +H++AV   G VY+WG G  GRLG
Sbjct: 266 --------------RTKPFMIKELEGKKIVYIQCGMHHSMAVSQDGDVYSWGLGNGGRLG 311

Query: 263 H------REQKDEWVPRRVD-VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---L 312
                  R   ++ +P++++  F  N ++     +S GS  S      G LY WGK    
Sbjct: 312 QGYNDESRSNPNQLLPKKIEFTFDDNQIMN----VSCGSTISCVAVKAGTLYTWGKGEHE 367

Query: 313 KNNGDDWM-YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
           K   DD++ Y  P   +    +  +  G  H   +  +     WG    G LG+G   ++
Sbjct: 368 KPKFDDFIEYSSPFPMIEDKQIVYVSCGASHVMALDRNGRLFGWGQGNEGCLGHGDCKKR 427

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            S  P  +   E    I VACG   ++VI +
Sbjct: 428 LSVCP--ISFFENKRCIDVACGDKFTVVIAE 456



 Score = 44.7 bits (104), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           P++  D + V   C + H +A+D  GR + WG+   G LGHGD  +R     +S     +
Sbjct: 382 PMIE-DKQIVYVSCGASHVMALDRNGRLFGWGQGNEGCLGHGDCKKRLSVCPISFFENKR 440

Query: 112 IKKAGAGRSHTVVVTE----DGNSLAFGW-NKHG--QLGSGSIRNEIEPSPVRCLVSEVT 164
                 G   TVV+ E      N++ F + NK G  +L  G     +     +  +  + 
Sbjct: 441 CIDVACGDKFTVVIAEVYPDKKNTMNFDFLNKSGSMELAQGLKNKLMREKQNQDGIKSIR 500

Query: 165 ATACGADFTVWLSSVEGASIL----NAGLPQYGQ-------LGHGTDNEYNT 205
              CG D        +   +L    N  + Q  Q       L    DN YNT
Sbjct: 501 KPLCGGDNISDQLRQKIQDVLVKNRNRSISQRDQYLQDSRNLNQTIDNNYNT 552


>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1070

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 166/399 (41%), Gaps = 55/399 (13%)

Query: 46  SPTRLRPLVGV--DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           +P  +R   GV  D  +V       H +A+  +G  Y WG N+ GQLG+  K     P  
Sbjct: 602 TPNIVRKPTGVPTDFTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVR 661

Query: 104 VSELSK-------YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           V + +         K  +  AG  H++ +  +G   A+GWN +G+LG+ S  +   P  V
Sbjct: 662 VRDPANPTDPNKGLKAIQVSAGDEHSLALDSNGYVYAWGWNDNGRLGNNSTTDSSVPVRV 721

Query: 157 RCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
           R   S       + A    A +   L+          GL  YGQLG+ +    N+    V
Sbjct: 722 RDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSK---NSSSFPV 778

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
           ++   A P      A  G   V+V+ G +H++AV S GY Y WG   YG+LG+    D  
Sbjct: 779 RVRDFASPN----DANKGLKAVQVSAGYSHSLAVGSDGYTYAWGLNNYGQLGNSNTVDST 834

Query: 271 VPRRVDVFQRNNVLPPEA-------VISAGSVNSSCTAGGGQLYMWG--KLKNNGD---- 317
           VP RV    R+   P +A        I+AG  +S      G  Y WG    +  GD    
Sbjct: 835 VPVRV----RDPTSPKDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTS 890

Query: 318 DWMYPKPLMDLS-------GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
           +   P P+ D +       G        G+ H   VG++    +WG   YG+LG G    
Sbjct: 891 NSSVPVPVRDPTSPADASKGLQATRFSVGDHHSLAVGSNGYAYAWGENSYGQLGDG--TT 948

Query: 370 KSSAMPKKVDILEGMHVISVACGY----GHSLVIVDRTN 404
             S +P  V +L  +  +  A  +    G +L  V  +N
Sbjct: 949 DDSNVP--VSVLFNLQPVITAARFDTSPGTNLASVSNSN 985



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 159/381 (41%), Gaps = 49/381 (12%)

Query: 58  IRFVAAGCVSCHC----VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE----LSK 109
           IRF   G    +     +AV  +G+ Y WG N  GQLG      R  P IV +     + 
Sbjct: 556 IRFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPTD 615

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-------- 161
           +   +  AG+ H++ +  DG   A+G N+HGQLG+ +  N   P  VR   +        
Sbjct: 616 FTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGL 675

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +    + G + ++ L S     +   G    G+LG+ +     T DSSV +       P 
Sbjct: 676 KAIQVSAGDEHSLALDS--NGYVYAWGWNDNGRLGNNS-----TTDSSVPVRVRDPASPT 728

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
             +   G   V+V+ G +H++AV S GY Y WG   YG+LG+  +     P RV  F   
Sbjct: 729 DPS--KGLKAVQVSAGWHHSLAVGSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASP 786

Query: 282 NVLPP--EAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLS-- 329
           N      +AV +SAG  +S      G  Y WG L N G        D   P  + D +  
Sbjct: 787 NDANKGLKAVQVSAGYSHSLAVGSDGYTYAWG-LNNYGQLGNSNTVDSTVPVRVRDPTSP 845

Query: 330 -----GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK-----V 378
                G     +++G  H   VG +    +WG   Y +LG G     S  +P +      
Sbjct: 846 KDASKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPVPVRDPTSPA 905

Query: 379 DILEGMHVISVACGYGHSLVI 399
           D  +G+     + G  HSL +
Sbjct: 906 DASKGLQATRFSVGDHHSLAV 926



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 123/289 (42%), Gaps = 36/289 (12%)

Query: 30  WDAVGRRKGALDGNLVSPTRLR-------PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
           W+  GR       +   P R+R       P  G+    V+AG    H +AV  +G  Y W
Sbjct: 701 WNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGW--HHSLAVGSDGYTYAW 758

Query: 83  GRNERGQLGHGDKIQRDRPTIVSELSK-------YKIKKAGAGRSHTVVVTEDGNSLAFG 135
           G N  GQLG+  K     P  V + +         K  +  AG SH++ V  DG + A+G
Sbjct: 759 GLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYTYAWG 818

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGL 189
            N +GQLG+ +  +   P  VR   S       + ATA  A     L+          G 
Sbjct: 819 LNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAINAGGEHSLAVGNNGYAYAWGW 878

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
             Y QLG GT     T +SSV +       P    A  G    + + G +H++AV S GY
Sbjct: 879 NLYRQLGDGT-----TSNSSVPVPVRDPTSP--ADASKGLQATRFSVGDHHSLAVGSNGY 931

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            Y WG   YG+LG     D  VP  V +F   N+ P   VI+A   ++S
Sbjct: 932 AYAWGENSYGQLGDGTTDDSNVPVSV-LF---NLQP---VITAARFDTS 973



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 144/353 (40%), Gaps = 66/353 (18%)

Query: 89  QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV----VTEDGNSLAFGWNKHGQLGS 144
           QLGH    +    T     S  +  + G  + +T V    V  DG + A+G N +GQLG 
Sbjct: 539 QLGH----ETTTITPPDSTSGIRFNQVGGAKYYTYVFSLAVGSDGKAYAWGDNTYGQLGD 594

Query: 145 GSIRNEIEPSPVRCLVSEVTATACGADFTV-------WLSSVEGAS--ILNAGLPQYGQL 195
            +  +   P+ VR        T    DFT        W S   G+   +   G  Q+GQL
Sbjct: 595 ATTNSRSTPNIVRK------PTGVPTDFTYVQVSAGKWHSLALGSDGYVYAWGSNQHGQL 648

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G+ T       +SSV +       P       G   ++V+ G  H++A+DS GYVY WG+
Sbjct: 649 GNNTKT-----NSSVPVRVRDPANP--TDPNKGLKAIQVSAGDEHSLALDSNGYVYAWGW 701

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGGGQLYM 308
              GRLG+    D  VP RV    R+   P +         +SAG  +S      G  Y 
Sbjct: 702 NDNGRLGNNSTTDSSVPVRV----RDPASPTDPSKGLKAVQVSAGWHHSLAVGSDGYTYA 757

Query: 309 WGKLKNNG-------DDWMYPKPLMDLSGWN-----LRCMD--SGNMHHF-VGADSSCIS 353
           WG L N G       +   +P  + D +  N     L+ +   +G  H   VG+D    +
Sbjct: 758 WG-LNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSLAVGSDGYTYA 816

Query: 354 WGHAQYGELGYG-------PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           WG   YG+LG         P   +    PK  D  +G+   ++  G  HSL +
Sbjct: 817 WGLNNYGQLGNSNTVDSTVPVRVRDPTSPK--DASKGLKATAINAGGEHSLAV 867


>gi|148654597|ref|YP_001274802.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
 gi|148566707|gb|ABQ88852.1| regulator of chromosome condensation, RCC1 [Roseiflexus sp. RS-1]
          Length = 837

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 111/370 (30%), Positives = 155/370 (41%), Gaps = 44/370 (11%)

Query: 29  CWDAVGRRKGALDGNLVSPTRLRPLV--GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNE 86
           CW   GR      G+  +  RL P+   G+      A   S  C  +D   R   WGRN 
Sbjct: 499 CW---GRNSSGQLGDGTTERRLTPVTVSGLSAATALAAGDSHTCALLDTR-RVRCWGRNS 554

Query: 87  RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
            GQLG G +  R  P  VS LS      AG   SHT  + + G    +GWN  GQLG G+
Sbjct: 555 SGQLGDGTRTDRVTPVAVSGLSGATALAAG--NSHTCTLLDTGTVQCWGWNSSGQLGDGT 612

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
             + + P+ V  L S VTA A GA+ T  L  ++  ++   G    GQLG GT  +  T 
Sbjct: 613 RTDRVTPAAVSGL-SGVTALAAGANHTCAL--MDSGTVQCWGRNSSGQLGDGTRTDRVT- 668

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                        P A++ L+G  +  +A G NHT A+   G V  WG    G+LG    
Sbjct: 669 -------------PAAVSGLSG--VTALAAGANHTCALMDSGTVQCWGRNSSGQLGDGTT 713

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGD----DWM 320
            D   P  V      + L     + AG+ ++      G +  WGK      GD    D +
Sbjct: 714 TDRVTPAAV------SGLSGVTALVAGANHTCALMPTGTVQCWGKNEFGQLGDGTTTDRL 767

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
            P  +  LSG  +  + +G+ H     ++     WG   +G LG  P     S +P+ V 
Sbjct: 768 TPVAVSGLSG--ITALAAGSEHTCAVLNTGAARCWGRNLFGRLGISPL--DYSPLPRTVV 823

Query: 380 ILEGMHVISV 389
           I+     I V
Sbjct: 824 IIPHQVFIPV 833



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 106/353 (30%), Positives = 146/353 (41%), Gaps = 44/353 (12%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +AAG V  H  A+   G    WGRNE GQLG G   +R  P +VS LS        AG  
Sbjct: 381 LAAGGV--HTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGLSGATALT--AGDR 436

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           HT  V +   +  +G N  GQLG G+    + P  V  L S  T+ A G   T  L +V 
Sbjct: 437 HTCAVLQTRTAQCWGENSPGQLGDGTTERRLTPVTVSGL-SGATSLAAGDGHTCALMNVR 495

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
            A     G    GQLG GT               E +  P  ++ L+  T   +A G +H
Sbjct: 496 TAQCW--GRNSSGQLGDGT--------------TERRLTPVTVSGLSAAT--ALAAGDSH 537

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           T A+     V  WG    G+LG   + D   P  V      + L     ++AG+ + +CT
Sbjct: 538 TCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAV------SGLSGATALAAGN-SHTCT 590

Query: 301 ---AGGGQLYMWGKLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS 353
               G  Q + W      GD    D + P  +  LSG  +  + +G  H     DS  + 
Sbjct: 591 LLDTGTVQCWGWNSSGQLGDGTRTDRVTPAAVSGLSG--VTALAAGANHTCALMDSGTVQ 648

Query: 354 -WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            WG    G+LG G    +    P  V  L G  V ++A G  H+  ++D   V
Sbjct: 649 CWGRNSSGQLGDGTRTDR--VTPAAVSGLSG--VTALAAGANHTCALMDSGTV 697



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 148/355 (41%), Gaps = 42/355 (11%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R +A      H  A+   G  + WG N  GQLG G    R  P  VS LS   +    AG
Sbjct: 77  RVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMPVAVSGLSG--VTALAAG 134

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
           R HT  +   G    +G N  GQLG  +I N + P  V  L S V A A G   T  L  
Sbjct: 135 RYHTCALLNTGTVQCWGLNSSGQLGDWTITNRVTPVAVSGL-SGVIALAAGDRHTCAL-- 191

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
           ++  ++   G  ++GQLG GT N+  T              P A++ L+G  +  +A G 
Sbjct: 192 LDTRTVRCWGENEHGQLGDGTTNDRWT--------------PVAVSGLSG--VTALAAGG 235

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            HT A  + G V  WG  G G+LG   +     P  V      + L     ++AG  ++ 
Sbjct: 236 RHTCAALNTGTVQCWGGNGAGQLGDGTRTSRLTPMAV------SGLSGATALAAGFEHTC 289

Query: 299 CTAGGGQLYMWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
                G +  WG L ++G       +  + P  +  LSG  +  + +G+ H      +  
Sbjct: 290 ALLDTGTVRCWG-LNSSGQLGDGTTERRLTPVAVSGLSG--VTALAAGDFHTCAVLQTET 346

Query: 352 IS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +  WG    G+LG G   ++ +  P  V  L G    ++A G  H+  ++    V
Sbjct: 347 VQCWGLNSSGQLGDGTTERRLT--PVSVSGLSGS--TALAAGGVHTCALLQTGTV 397



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 144/368 (39%), Gaps = 44/368 (11%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L GV    +AAG    H  AV        WG N  GQLG G   +R  P  V
Sbjct: 317 LTPVAVSGLSGVTA--LAAG--DFHTCAVLQTETVQCWGLNSSGQLGDGTTERRLTPVSV 372

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           S LS      AG    HT  + + G    +G N+ GQLG G+    + P  V  L S  T
Sbjct: 373 SGLSGSTALAAGG--VHTCALLQTGTVQCWGRNEFGQLGDGTTERRLTPVVVSGL-SGAT 429

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A   G   T  +     A       P  GQLG GT               E +  P  ++
Sbjct: 430 ALTAGDRHTCAVLQTRTAQCWGENSP--GQLGDGT--------------TERRLTPVTVS 473

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L+G T   +A G  HT A+ +      WG    G+LG    +    P  V      + L
Sbjct: 474 GLSGAT--SLAAGDGHTCALMNVRTAQCWGRNSSGQLGDGTTERRLTPVTV------SGL 525

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDS 338
                ++AG  ++       ++  WG+  +   GD    D + P  +  LSG     + +
Sbjct: 526 SAATALAAGDSHTCALLDTRRVRCWGRNSSGQLGDGTRTDRVTPVAVSGLSG--ATALAA 583

Query: 339 GNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           GN H     D+  +  WG    G+LG G    +    P  V  L G  V ++A G  H+ 
Sbjct: 584 GNSHTCTLLDTGTVQCWGWNSSGQLGDGTRTDR--VTPAAVSGLSG--VTALAAGANHTC 639

Query: 398 VIVDRTNV 405
            ++D   V
Sbjct: 640 ALMDSGTV 647



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/307 (27%), Positives = 121/307 (39%), Gaps = 36/307 (11%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           S L   ++    AGR HT  +   G    +GWN  GQLG G+  +   P  V  L S VT
Sbjct: 71  SPLPLSRVIALAAGRYHTCALLNTGTVWCWGWNGSGQLGDGTTTDRAMPVAVSGL-SGVT 129

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G   T  L  +   ++   GL   GQLG  T     T              P A++
Sbjct: 130 ALAAGRYHTCAL--LNTGTVQCWGLNSSGQLGDWTITNRVT--------------PVAVS 173

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L+G  ++ +A G  HT A+     V  WG   +G+LG     D W P  V        L
Sbjct: 174 GLSG--VIALAAGDRHTCALLDTRTVRCWGENEHGQLGDGTTNDRWTPVAVSGLSGVTAL 231

Query: 285 PPE-----AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
                   A ++ G+V      G GQL    +        + P  +  LSG     + +G
Sbjct: 232 AAGGRHTCAALNTGTVQCWGGNGAGQLGDGTRTSR-----LTPMAVSGLSG--ATALAAG 284

Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H     D+  +  WG    G+LG G   ++ +  P  V  L G  V ++A G  H+  
Sbjct: 285 FEHTCALLDTGTVRCWGLNSSGQLGDGTTERRLT--PVAVSGLSG--VTALAAGDFHTCA 340

Query: 399 IVDRTNV 405
           ++    V
Sbjct: 341 VLQTETV 347


>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60470703|gb|EAL68677.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 849

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 108/210 (51%), Gaps = 13/210 (6%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           AV   GR YTWG NE+GQLG G++     P +V  L    I     GR H   +T+ G  
Sbjct: 226 AVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQLVKTLIDVNIVSVVCGRQHICAITDQGEV 285

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAG 188
            ++G    GQLG G++++ + P  ++  V     +   ACG++FT+ + SV+G  +   G
Sbjct: 286 YSWGLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTM-VRSVQGL-LYAFG 343

Query: 189 LPQYGQLGHGTDNE---YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
             +YGQLG   + +   +  +D+  K +      P  + +L  + I  VACG  HT+ V 
Sbjct: 344 HGEYGQLGSTEETQHLDFGGRDNHFKYSI-----PIVVKSLETKKIKNVACGHLHTIVVT 398

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            +  VY WG+G  G LG   ++ + VP+ +
Sbjct: 399 DENEVYQWGWGSSGALGLGNKRFQLVPQLI 428



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 163/390 (41%), Gaps = 38/390 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG------DKIQR 98
           + PT +  L+G  I    +G    H +AV   G  Y+WGR++ GQLG G      DK+  
Sbjct: 23  LEPTVIEGLLGKRIIQTVSG--EAHSLAVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMF 80

Query: 99  -DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
             +PT++  L   +I K   G  H++ +T+ G    + W +  +L       +I+ +   
Sbjct: 81  VAKPTLIKSLQHERIIKVACGNFHSLALTDMGK--VYEWGQLHRLDESQSSLDIQSTNGL 138

Query: 158 CLVSEVTAT-ACGADFTVWLSSVEGASILNAGL-PQYGQLGHGTDNEYNTKDSSV-KLAY 214
             +  +++     A  + +LS  + A   N G  P+         N   +K   + K+  
Sbjct: 139 IEMPRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIID 198

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
             Q  P  I  +  E +V V+ G   + AV   G +YTWGF   G+LG   +     P+ 
Sbjct: 199 LNQTIPMQIQDIP-EEVVDVSGGWAFSAAVTKSGRLYTWGFNEKGQLGLGNRWFHSTPQL 257

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDL 328
           V      N++     +  G  +       G++Y W     G+L + N   +++PK +   
Sbjct: 258 VKTLIDVNIVS----VVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYLHPKKIQQF 313

Query: 329 SGWNLRCMDSGNMHHFVGADSS---CISWGHAQYGELGYGPYGQK----------SSAMP 375
              N R        +F    S      ++GH +YG+LG     Q             ++P
Sbjct: 314 VELNERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIP 373

Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             V  LE   + +VACG+ H++V+ D   V
Sbjct: 374 IVVKSLETKKIKNVACGHLHTIVVTDENEV 403



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/388 (22%), Positives = 153/388 (39%), Gaps = 57/388 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTI-V 104
           PT ++ L     R +   C + H +A+   G+ Y WG+  R         IQ     I +
Sbjct: 84  PTLIKSLQHE--RIIKVACGNFHSLALTDMGKVYEWGQLHRLDESQSSLDIQSTNGLIEM 141

Query: 105 SELSKYKIKKAGA--------------GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
             LS  +I +A                G +      ED  +     +K   LG     N+
Sbjct: 142 PRLSSQRIIEASVSQYLSGEKKAYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQ 201

Query: 151 IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
             P  ++ +  EV   + G  F+  ++  +   +   G  + GQLG G    ++T     
Sbjct: 202 TIPMQIQDIPEEVVDVSGGWAFSAAVT--KSGRLYTWGFNEKGQLGLGNRWFHST----- 254

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                    P+ +  L    IV V CG  H  A+  +G VY+WG G +G+LGH   K   
Sbjct: 255 ---------PQLVKTLIDVNIVSVVCGRQHICAITDQGEVYSWGLGVFGQLGHGNVKSYL 305

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL------------- 312
            P+++  F   N     A ++ GS  +   +  G LY      +G+L             
Sbjct: 306 HPKKIQQFVELN--ERIAQVACGSNFTMVRSVQGLLYAFGHGEYGQLGSTEETQHLDFGG 363

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS 371
           ++N   +  P  +  L    ++ +  G++H  V  D + +  WG    G LG G   ++ 
Sbjct: 364 RDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLG--NKRF 421

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
             +P+ +  L G  + S+  G  H++V+
Sbjct: 422 QLVPQLITSLSGEEIASITAGEKHTIVV 449



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 10/124 (8%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
           L+ G +K+GQLG  SI+  +EP+ +  L+   +  T  G   ++ +S      + + G  
Sbjct: 4   LSVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRF--GDVYSWGRS 61

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           + GQLG G    Y   D  + +A     +P  I +L  E I+KVACG  H++A+   G V
Sbjct: 62  KEGQLGIGQG--YGGSDKVMFVA-----KPTLIKSLQHERIIKVACGNFHSLALTDMGKV 114

Query: 251 YTWG 254
           Y WG
Sbjct: 115 YEWG 118



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 25/137 (18%)

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           S+L+ G  + GQLGH           S+K   E    P  I  L G+ I++   G  H++
Sbjct: 2   SVLSVGQSKNGQLGH----------DSIKECLE----PTVIEGLLGKRIIQTVSGEAHSL 47

Query: 243 AVDSKGYVYTWGFGGYGRLGHRE-----QKDEWV--PRRVDVFQRNNVLPPEAVISAGSV 295
           AV   G VY+WG    G+LG  +      K  +V  P  +   Q   ++     ++ G+ 
Sbjct: 48  AVSRFGDVYSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIK----VACGNF 103

Query: 296 NSSCTAGGGQLYMWGKL 312
           +S      G++Y WG+L
Sbjct: 104 HSLALTDMGKVYEWGQL 120



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 10/69 (14%)

Query: 353 SWGHAQYGELGYGP-YGQKSSAM----PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           SWG ++ G+LG G  YG     M    P  +  L+   +I VACG  HSL + D   V E
Sbjct: 57  SWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSLQHERIIKVACGNFHSLALTDMGKVYE 116

Query: 408 -----RLDQ 411
                RLD+
Sbjct: 117 WGQLHRLDE 125


>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
          Length = 1699

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 139/300 (46%), Gaps = 33/300 (11%)

Query: 50  LRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
           LRP+  +    ++F+AA     H +A+   G  Y+WG N+RGQLGH +   +   P ++ 
Sbjct: 405 LRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYSWGYNDRGQLGHENLATKIHVPKLIE 464

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVT 164
            L   K+  A     H+ V+T+ G    FG N  GQLG    +++  P  V+ L  +EV+
Sbjct: 465 SLKDKKLGFASVSYHHSAVITDAGELYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEVS 524

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG   T+  ++     +   G   YGQLG               LA+  Q +   + 
Sbjct: 525 MVACGLYHTIICTA--AGELFTCGKNDYGQLG---------------LAHNRQIKLPTLV 567

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           AL  E +  VACG  H+V V + G  +++G   YG+LG   +  + VP  V +     ++
Sbjct: 568 ALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMV 627

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPLMDLSGWN-LRCMD 337
                 + G  ++   +  GQ+Y++G+     L N G  D + P PL      N  RC+D
Sbjct: 628 ----RATCGCYHTVLLSEQGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVD 683



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 31/342 (9%)

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           +  G  Y+ G+N  G+LG GD I+R + T VS      I++  +G     V+T +G  L 
Sbjct: 325 EASGELYSCGQNSYGELGTGDDIERHQLTSVSLCGWDDIRQVVSGNETLAVLTNEGVVLT 384

Query: 134 FGWNKHGQLGSGSIRNEIEP-SPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGL 189
            G NK GQ G G     +    PV+ L S+     A + G +  + L+    A   + G 
Sbjct: 385 CGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLA--YSWGY 442

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
              GQLGH        ++ + K+       P+ I +L  + +   +   +H+  +   G 
Sbjct: 443 NDRGQLGH--------ENLATKIHV-----PKLIESLKDKKLGFASVSYHHSAVITDAGE 489

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM- 308
           +YT+G    G+LG    + +  P+ V   +   V    ++++ G  ++      G+L+  
Sbjct: 490 LYTFGMNDCGQLGLDHTQHQSTPQLVKSLEATEV----SMVACGLYHTIICTAAGELFTC 545

Query: 309 ----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
               +G+L    +  +    L+ L    +  +  G  H   V       S+G   YG+LG
Sbjct: 546 GKNDYGQLGLAHNRQIKLPTLVALPNEMVSFVACGYYHSVVVSTGGRAFSFGRNDYGQLG 605

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G    ++  +P  V +     ++   CG  H++++ ++  V
Sbjct: 606 IGSKVHQN--VPNVVALSSNTRMVRATCGCYHTVLLSEQGQV 645



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 6/139 (4%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            GEL  CG   +  +G    A +  +  PT L  L    + FVA G    H V V   GR
Sbjct: 539 AGELFTCGKNDYGQLGL---AHNRQIKLPT-LVALPNEMVSFVACGYY--HSVVVSTGGR 592

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            +++GRN+ GQLG G K+ ++ P +V+  S  ++ +A  G  HTV+++E G    FG N 
Sbjct: 593 AFSFGRNDYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGCYHTVLLSEQGQVYVFGRNN 652

Query: 139 HGQLGSGSIRNEIEPSPVR 157
            GQLG+    + + P P++
Sbjct: 653 KGQLGNRGSADALLPVPLK 671


>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
 gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
 gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
           II]
          Length = 487

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 159/356 (44%), Gaps = 47/356 (13%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C S +  A+   G    WG    GQLG G+      P +   LS   + +      HT  
Sbjct: 49  CGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVIQVACSDRHTAA 106

Query: 125 VTEDGNSLAFGWNKHGQLGSG----SIRNEI--EPSPVRCLVSE-VTATACGADFTVWLS 177
           +  +G    +G +K+G+LG G    SI N +  +P  V+ L  E V   +CG+  T  L+
Sbjct: 107 ILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLT 166

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             + A  L  GL   G+LGHG   +  T              P+ I +LAG  I +++CG
Sbjct: 167 DDKKA--LTWGLGLQGRLGHGDTQDIFT--------------PKLIESLAGLPIKEISCG 210

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAG 293
            +HT  +   G +Y +G G +G+LG     D  +PR ++        P E +    +S G
Sbjct: 211 GHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEG-------PLEDIQITKVSLG 263

Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
           S +S+     G++Y WG+             D++ PK L +L    +  +  GN H    
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVAL 323

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           +D   I +WG  +   +G+G  G   + MP K  IL+  +++ V C   HS+ + D
Sbjct: 324 SDVGDIYTWGMTK--NIGHGIQGIHPN-MPSKHPILQNKNIVQVVCSSSHSIALSD 376



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 123/279 (44%), Gaps = 34/279 (12%)

Query: 50  LRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---KIQRD---RPT 102
           L P V + ++  +   C   H  A+   G  YTWG ++ G+LGHG     I  +   +P 
Sbjct: 83  LVPRVNLSLKNVIQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPM 142

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            V  L   K+ +   G  HT  +T+D  +L +G    G+LG G  ++   P  +  L   
Sbjct: 143 KVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL 202

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +   +CG   T  L       +   G   +G+LG G+     T D  +         PR
Sbjct: 203 PIKEISCGGHHTAILLVTGKLYMFGGG--AFGKLGFGS-----TDDVLI---------PR 246

Query: 222 AI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR---EQKDEWVPRRVDV 277
            +   L    I KV+ G+ H+ AV   G VYTWG G  GRLGH     + D   P+R+  
Sbjct: 247 LLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSN 304

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
            ++  ++     IS G+ +S   +  G +Y WG  KN G
Sbjct: 305 LEKAFIVD----ISCGNSHSVALSDVGDIYTWGMTKNIG 339



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           G+ + ++  N+VS P +++ L G  +  V+ G     C+  D   +  TWG   +G+LGH
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD--KKALTWGLGLQGRLGH 184

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
           GD      P ++  L+   IK+   G  HT ++   G    FG    G+LG GS  + + 
Sbjct: 185 GDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLI 244

Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP----QYGQLGH---GTDNEYNT 205
           P  +   + ++  T       V L S   A++   G      Q G+LGH   G ++++ +
Sbjct: 245 PRLLEGPLEDIQITK------VSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLS 298

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                         P+ ++ L    IV ++CG +H+VA+   G +YTWG      +GH  
Sbjct: 299 --------------PKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHGI 342

Query: 266 QK-DEWVPRRVDVFQRNNVL 284
           Q     +P +  + Q  N++
Sbjct: 343 QGIHPNMPSKHPILQNKNIV 362



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 36/227 (15%)

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAVDS 246
           G  +YGQ  HG+  E            E  P P  +  L    +I KV+CG+N++ A+ +
Sbjct: 14  GSTEYGQ--HGSKGE------------EVSPGPHLVDGLRHLSSISKVSCGSNYSAAITN 59

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G +  WG+GG G+LG    +D  VP RV++  +N +      ++    +++     G+L
Sbjct: 60  SGDLILWGYGGCGQLGFGNLEDCLVP-RVNLSLKNVI-----QVACSDRHTAAILSNGEL 113

Query: 307 YMWGKLKN------------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCIS 353
           Y WG  KN            + +    P  +  L G  +  +  G+ H   +  D   ++
Sbjct: 114 YTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALT 173

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           WG    G LG+G    +    PK ++ L G+ +  ++CG  H+ +++
Sbjct: 174 WGLGLQGRLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILL 218



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           SK  V  WG   YG+ G + ++    P  VD  +    L   + +S GS  S+     G 
Sbjct: 6   SKSGVVVWGSTEYGQHGSKGEEVSPGPHLVDGLRH---LSSISKVSCGSNYSAAITNSGD 62

Query: 306 LYMWG-----KLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           L +WG     +L   N +D + P+  ++LS  N+  +   + H   + ++    +WG ++
Sbjct: 63  LILWGYGGCGQLGFGNLEDCLVPR--VNLSLKNVIQVACSDRHTAAILSNGELYTWGCSK 120

Query: 359 YGELGYGPYGQKSS----AMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G+LG+G +    S    + P KV  LEG  VI V+CG  H+  + D
Sbjct: 121 NGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD 167


>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
 gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
          Length = 994

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/246 (31%), Positives = 123/246 (50%), Gaps = 24/246 (9%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDI-RFVAAGCVSCHCVAVD-VEG 77
           G L   GS  +  +G  +     N+V+  R   +  +++   V   C S H +A++  +G
Sbjct: 131 GHLFSWGSNVYGQLGVERM----NVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WG N+ GQLG G +     PT V++L    I +  AG SH++V+T  G    +G N
Sbjct: 187 VLHAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKN 246

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             GQ+G    R+ + PS V+ L ++ V   ACG DF+V +++  G     AG   YGQLG
Sbjct: 247 MFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVAVTATGGLFTFGAG--TYGQLG 304

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           HG  N              ++  P+ +  L G  ++ VACG  HT+A+ ++  +Y +G  
Sbjct: 305 HGNQN--------------SELFPKQVMELMGSVVLDVACGRCHTLAI-TENKLYAFGLN 349

Query: 257 GYGRLG 262
             G+LG
Sbjct: 350 TSGQLG 355



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 131/265 (49%), Gaps = 27/265 (10%)

Query: 20  GELLFCGSTCWDAVG----RRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCVAVD 74
           G +  CG+  +  +G    +RK  L  NL     ++   VG+ +  ++  C   HCVA+ 
Sbjct: 71  GSVFSCGNNDFYQLGHDGIKRKPNLYENLHWYIDVKQSFVGIHV--ISVACGDAHCVALT 128

Query: 75  VEGRCYTWGRNERGQLG--HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV-TEDGNS 131
            +G  ++WG N  GQLG    + + + R   + E++   I +   G +H++ + + DG  
Sbjct: 129 NDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDGVL 188

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLP 190
            A+G N HGQLG G+  + I P+ V  L+   +   A GA  ++ L+     ++   G  
Sbjct: 189 HAWGLNDHGQLGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTP--SGTVFGWGKN 246

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            +GQ+G     +         + Y     P  +  L  + ++++ACG + +VAV + G +
Sbjct: 247 MFGQIGQNEQRD---------ILY-----PSLVKLLRTQKVIRLACGEDFSVAVTATGGL 292

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRV 275
           +T+G G YG+LGH  Q  E  P++V
Sbjct: 293 FTFGAGTYGQLGHGNQNSELFPKQV 317



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 48/368 (13%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVD 74
           K   LL CG+T    +G     L G      R   LV     F+    ++C   H V + 
Sbjct: 14  KSMSLLCCGNTSDGQLG-----LGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLL 68

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY----------KIKKAGAGRSHTVV 124
            +G  ++ G N+  QLGH D I+R +P +   L  Y           +     G +H V 
Sbjct: 69  DDGSVFSCGNNDFYQLGH-DGIKR-KPNLYENLHWYIDVKQSFVGIHVISVACGDAHCVA 126

Query: 125 VTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           +T DG+  ++G N +GQLG      +     P      ++ +   ACG++ ++ L S +G
Sbjct: 127 LTNDGHLFSWGSNVYGQLGVERMNVVAKARYPRIQEINLANIVQIACGSNHSLALESTDG 186

Query: 182 ASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
             +L+A GL  +GQLG GT               E+   P  +  L G  I ++A G +H
Sbjct: 187 --VLHAWGLNDHGQLGIGTR--------------ESFIGPTTVNKLMGIPICQLAAGASH 230

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           ++ +   G V+ WG   +G++G  EQ+D   P  V + +   V+    +      + + T
Sbjct: 231 SLVLTPSGTVFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVI---RLACGEDFSVAVT 287

Query: 301 AGGGQLYM----WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
           A GG        +G+L + N +  ++PK +M+L G  +  +  G  H     ++   ++G
Sbjct: 288 ATGGLFTFGAGTYGQLGHGNQNSELFPKQVMELMGSVVLDVACGRCHTLAITENKLYAFG 347

Query: 356 HAQYGELG 363
               G+LG
Sbjct: 348 LNTSGQLG 355



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 155/345 (44%), Gaps = 52/345 (15%)

Query: 83  GRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           G    GQLG G   ++  R    + S  +  KI++   GR H+V++ +DG+  + G N  
Sbjct: 22  GNTSDGQLGLGGIAEENVRSLTLVESTKNFLKIRQIACGRHHSVMLLDDGSVFSCGNNDF 81

Query: 140 GQLGSGSIRN------------EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
            QLG   I+             +++ S V      V + ACG    V L++     + + 
Sbjct: 82  YQLGHDGIKRKPNLYENLHWYIDVKQSFVGI---HVISVACGDAHCVALTN--DGHLFSW 136

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   YGQLG              ++   A+ R   I  +    IV++ACG+NH++A++S 
Sbjct: 137 GSNVYGQLG------------VERMNVVAKARYPRIQEINLANIVQIACGSNHSLALEST 184

Query: 248 -GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQ 305
            G ++ WG   +G+LG   ++    P  V     N ++  P   ++AG+ +S      G 
Sbjct: 185 DGVLHAWGLNDHGQLGIGTRESFIGPTTV-----NKLMGIPICQLAAGASHSLVLTPSGT 239

Query: 306 LYMWGKL------KNNGDDWMYP---KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH 356
           ++ WGK       +N   D +YP   K L       L C +  ++   V A     ++G 
Sbjct: 240 VFGWGKNMFGQIGQNEQRDILYPSLVKLLRTQKVIRLACGEDFSVA--VTATGGLFTFGA 297

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             YG+LG+G   Q S   PK+V  L G  V+ VACG  H+L I +
Sbjct: 298 GTYGQLGHG--NQNSELFPKQVMELMGSVVLDVACGRCHTLAITE 340


>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
           adamanteus]
          Length = 1052

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 158/351 (45%), Gaps = 34/351 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   ++ V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRCSFFVNKKVQDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R RP  V  L    I     G +HT+ + + G   A+G+   GQLG SG+      P  
Sbjct: 71  SRKRPEQVGALDAQNIVTVSCGEAHTLALNDKGQVYAWGFAVDGQLGLSGTEEYTRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  +G+ + + G  +YGQLG G +             Y
Sbjct: 131 IKSLSDIQIVQVACGYFHSLALS--KGSEVFSWGQNKYGQLGLGYE-------------Y 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G    ++A G  H+  +   G V+ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGD-DWMYPKPLMDL 328
           +   +   ++     IS G  +++     G ++      +G+L +N     + P+ + +L
Sbjct: 236 LKSLRSQKIV----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S  P K
Sbjct: 292 MGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVK 342



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 143/333 (42%), Gaps = 34/333 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P   S     K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R    P  V  L ++ +   +CG   T+ L+  +   +   G    GQLG  
Sbjct: 64  GQLGHEKSRKR--PEQVGALDAQNIVTVSCGEAHTLALN--DKGQVYAWGFAVDGQLGLS 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY                PR I +L+   IV+VACG  H++A+     V++WG   Y
Sbjct: 120 GTEEYTRV-------------PRNIKSLSDIQIVQVACGYFHSLALSKGSEVFSWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K +  P+ +    ++ +  P A I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGYEYKKQASPQII----KSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTAHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
            +  P+KV  L G  V  +ACG  H+   V  T
Sbjct: 283 IN--PRKVFELMGNIVTQIACGRQHTSAFVPST 313



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  EI   P RC   +  +V    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +++ RP  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KSRKRPEQVGALDAQNIVTVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WGF   G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGFAVDGQLGLSGTEEYTRVPRNIKSLSDIQIVQ----VACGYFHSLALSKGSEVF 159

Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            WG+ K    G  + Y     P+ +  L G     + +G  H FV   S +   WG  ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSGAVFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG     +    +P  +  L    ++ ++CG  H+
Sbjct: 220 GQLGLN--DENDRYVPNLLKSLRSQKIVYISCGEDHT 254


>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase [Rhipicephalus pulchellus]
          Length = 1175

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 38/334 (11%)

Query: 80  YTWGRNERGQLGHGD-KIQRDRPTIVSELSKYK------IKKAGAGRSHTVVVTEDGNSL 132
           Y+WG    G+LG    K   D  T VS+  + +      +++   G  HT+V+  +G+  
Sbjct: 48  YSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVY 107

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
           + G N  GQLG      ++E         E+ A ACG   ++ LS  +   + + G  + 
Sbjct: 108 SCGANDFGQLGQDRSMRKLEQVAALS-AHEIRAVACGEAHSLALS--DAGQVFSWGCNRN 164

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG GT+              E++ RP+ I  LA   IV++ACG  H +A+ + G +++
Sbjct: 165 GQLGCGTEE-------------ESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 211

Query: 253 WGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           WG    G+  LG     +E +PRRV     + V  P A+++ G+++S      G +++WG
Sbjct: 212 WGGNASGQLGLGRDSTGNERLPRRVS----HLVGVPLALVACGAMHSVGLTPSGTVFVWG 267

Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
           +        ++  D ++P  L  L    ++ +  G  H   + AD    ++G   YG+LG
Sbjct: 268 RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 327

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +G   + + A+P++V  L G  +  ++CG  H++
Sbjct: 328 HGV--KVNEAVPRRVVELMGTAISQLSCGRCHTV 359



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 32/297 (10%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            G +  CG+  +  +G+     D ++    ++  L   +IR VA G    H +A+   G+
Sbjct: 103 NGSVYSCGANDFGQLGQ-----DRSMRKLEQVAALSAHEIRAVACG--EAHSLALSDAGQ 155

Query: 79  CYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            ++WG N  GQLG G ++  R RP ++ +L+   I +   G  H + +  +G   ++G N
Sbjct: 156 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 215

Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             GQLG G  S  NE  P  V  LV   +   ACGA  +V L+     ++   G    GQ
Sbjct: 216 ASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP--SGTVFVWGRNSCGQ 273

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG          D   +L       P  +  L  + I  V CG NHT A+ + G V+T+G
Sbjct: 274 LG--------LSDQRDRL------HPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFG 319

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA-GGGQLYMWG 310
            G YG+LGH  + +E VPRRV       +    + +S G  ++   A   G+LY++G
Sbjct: 320 AGTYGQLGHGVKVNEAVPRRVVELMGTAI----SQLSCGRCHTVAYAPQSGRLYIFG 372



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 32/341 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+R      +R VA G    H + +   G  Y+ G N+ GQLG    +++     V+ 
Sbjct: 76  PERVRRFGTRAVREVACG--HKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--VAA 131

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVT 164
           LS ++I+    G +H++ +++ G   ++G N++GQLG G+   + + P  ++ L +  + 
Sbjct: 132 LSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIV 191

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACGA   + L++     + + G    GQLG G D+  N +             PR ++
Sbjct: 192 QIACGAVHCLALAN--NGELFSWGGNASGQLGLGRDSTGNER------------LPRRVS 237

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L G  +  VACG  H+V +   G V+ WG    G+LG  +Q+D   P  +   +   + 
Sbjct: 238 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRI- 296

Query: 285 PPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGD-DWMYPKPLMDLSGWNLRCMDSG 339
             + V    +  ++ TA GG        +G+L +    +   P+ +++L G  +  +  G
Sbjct: 297 --KHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCG 354

Query: 340 NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV 378
             H    A  S     +G    G+LG G    +SSA+P  V
Sbjct: 355 RCHTVAYAPQSGRLYIFGLGMSGQLGNGTL--ESSALPVTV 393



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 4/159 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN   P R+  LVGV +  VA G +  H V +   G  + WGRN  GQLG  D+  R  P
Sbjct: 228 GNERLPRRVSHLVGVPLALVACGAM--HSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHP 285

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
           T++  L   +IK    G +HT  +T DG    FG   +GQLG G   NE  P  V  L+ 
Sbjct: 286 TVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMG 345

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           + ++  +CG   TV  +   G  +   GL   GQLG+GT
Sbjct: 346 TAISQLSCGRCHTVAYAPQSG-RLYIFGLGMSGQLGNGT 383



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + PT L+PL    I+ V  G    H  A+  +G  +T+G    GQLGHG K+    P  V
Sbjct: 283 LHPTVLKPLRSQRIKHVCCG--ENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRV 340

Query: 105 SELSKYKIKKAGAGRSHTVV-VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            EL    I +   GR HTV    + G    FG    GQLG+G++ +   P  V
Sbjct: 341 VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTV 393



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 250 VYTWGFGGYGRLGHREQKD-------EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           +Y+WG G  G LG  + KD          P RV  F    V      ++ G  ++     
Sbjct: 47  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVRE----VACGHKHTLVLLA 102

Query: 303 GGQLYMWG--KLKNNGDDWMYPK--PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
            G +Y  G       G D    K   +  LS   +R +  G  H    +D+    SWG  
Sbjct: 103 NGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 162

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + G+LG G   ++S   PK +  L  +H++ +ACG  H L + +
Sbjct: 163 RNGQLGCGT-EEESRLRPKVIKKLATLHIVQIACGAVHCLALAN 205


>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 648

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 104/332 (31%), Positives = 158/332 (47%), Gaps = 40/332 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P R++ L     R VA      H +A+  +G  +TWG N  GQL HG       P  V 
Sbjct: 341 TPKRVQGLS----RVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVR 396

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
           ELS      AGA   H++ V  DG+  A+G+N+ GQLG GS+ +  EP  V+ L S V A
Sbjct: 397 ELSGVVAVAAGA--LHSLAVLSDGSVWAWGYNRQGQLGDGSLSSSAEPVRVQGL-SGVAA 453

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            + G + +  L+      +   G   +GQLG GT     T ++ V +      R R ++ 
Sbjct: 454 VSAGLNHS--LARGTDGGVWAWGGNSFGQLGEGT-----TSNALVPV------RVRGLSG 500

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           +  ETI   + G NH++A  S G ++ WG    G+LG     +  VP RV        L 
Sbjct: 501 V--ETI---SAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSSVPVRV------QGLS 549

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY-PKPLMDLSGWNLRCMDSG 339
             A + AG  +S      G ++ WG     +L     +  + P  +  LSG  +  + +G
Sbjct: 550 GVAAVFAGLNHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQGLSG--METVAAG 607

Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
           ++H   VG+D S  SWG+  +G+LG+G  G+ 
Sbjct: 608 SLHSLSVGSDGSMWSWGNNHHGQLGHGLPGRS 639



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 173/360 (48%), Gaps = 46/360 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTIVS 105
           P RL  L   ++  VAAG    H +AV  +G  + WG N  GQLG G+ +  R  P  V 
Sbjct: 140 PWRLEDLS--EVVAVAAG--GNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWLPKQVQ 195

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVT 164
            LS   +  A AG +H++V   DG+  A+G N  GQLG+G S+     P  V+ L   V 
Sbjct: 196 GLSG--VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGL-RGVM 252

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G  +++ L S    ++   G   +GQ G G         S+V L+   + R     
Sbjct: 253 AVAAGGLYSLALRS--DGTLWAWGSNDHGQRGDG---------STVYLSSSVRVR----- 296

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L+G  +V +A G+ H++AV S G ++ WG   YG+LG   +KD   P+RV    R    
Sbjct: 297 WLSG--VVAMAAGSAHSLAVRSDGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR---- 350

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                ++AG  +S      G ++ WG          + +D   P  + +LSG  +  + +
Sbjct: 351 --VVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSG--VVAVAA 406

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G +H   V +D S  +WG+ + G+LG G     SSA P +V  L G  V +V+ G  HSL
Sbjct: 407 GALHSLAVLSDGSVWAWGYNRQGQLGDGSL--SSSAEPVRVQGLSG--VAAVSAGLNHSL 462



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/232 (33%), Positives = 111/232 (47%), Gaps = 29/232 (12%)

Query: 36  RKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG 91
           R+G L DG+L S   P R++ L GV    V+AG    H +A   +G  + WG N  GQLG
Sbjct: 427 RQGQLGDGSLSSSAEPVRVQGLSGV--AAVSAGL--NHSLARGTDGGVWAWGGNSFGQLG 482

Query: 92  HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
            G       P  V  LS   ++   AG +H++    DG   A+G N  GQLG G+  N  
Sbjct: 483 EGTTSNALVPVRVRGLSG--VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSNSS 540

Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P  V+ L S V A   G + +  L+     S+   G+  +GQLG GT N          
Sbjct: 541 VPVRVQGL-SGVAAVFAGLNHS--LAVRTDGSVWAWGINSFGQLGEGTTNT--------- 588

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
                   P  +  L+G  +  VA G+ H+++V S G +++WG   +G+LGH
Sbjct: 589 -----SFAPVRVQGLSG--METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGH 633



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 161/363 (44%), Gaps = 47/363 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+R L GV    VA      H +A+  +G  + WG N  GQLG G       P  V  
Sbjct: 39  PVRVRGLSGV----VAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSDSHSEPVRVPG 94

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTA 165
           LS   +    AG +H++ +  DG+  A+G N   QLG G+   +    P R   +SEV A
Sbjct: 95  LS--GVVAVSAGDNHSLALRSDGSVWAWGDNNSDQLG-GAPGAQSYSVPWRLEDLSEVVA 151

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G + +  L+     ++   G    GQLG G  N   T+             P+ +  
Sbjct: 152 VAAGGNHS--LAVRADGTVWAWGDNFAGQLGDG--NILTTR-----------WLPKQVQG 196

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVL 284
           L+G  +V  + G  H++   S G V+ WG    G+LG+        +P +V   +   V+
Sbjct: 197 LSG--VVAASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLR--GVM 252

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMD---LSGWNLRCMD 337
                ++AG + S      G L+ WG      + +G   +Y    +    LSG  +  M 
Sbjct: 253 ----AVAAGGLYSLALRSDGTLWAWGSNDHGQRGDGST-VYLSSSVRVRWLSG--VVAMA 305

Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +G+ H   V +D +  +WG   YG+LG G   +K    PK+V  L    V++VA G GHS
Sbjct: 306 AGSAHSLAVRSDGTLWAWGANYYGQLGDGT--RKDHDTPKRVQGLS--RVVAVAAGDGHS 361

Query: 397 LVI 399
           + +
Sbjct: 362 IAL 364



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/340 (28%), Positives = 148/340 (43%), Gaps = 41/340 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  + WG N  GQLG G       P  V  LS      AG G  H++ +  D
Sbjct: 7   HSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLSGVVAVSAGEG--HSLALHRD 64

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N  GQLG G+  +  EP  V  L S V A + G + ++ L S    S+   G
Sbjct: 65  GTVWAWGDNALGQLGDGTSDSHSEPVRVPGL-SGVVAVSAGDNHSLALRS--DGSVWAWG 121

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
                QLG     +          +Y    R   ++      +V VA G NH++AV + G
Sbjct: 122 DNNSDQLGGAPGAQ----------SYSVPWRLEDLS-----EVVAVAAGGNHSLAVRADG 166

Query: 249 YVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V+ WG    G+LG        W+P++V        L      SAG  +S      G ++
Sbjct: 167 TVWAWGDNFAGQLGDGNILTTRWLPKQV------QGLSGVVAASAGWAHSMVALSDGSVW 220

Query: 308 MWGKLKN----NGDDWMY---PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG   +    NG    Y   P+ +  L G  +  + +G ++   + +D +  +WG   +
Sbjct: 221 AWGNNTSGQLGNGISVGYGALPEQVQGLRG--VMAVAAGGLYSLALRSDGTLWAWGSNDH 278

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+ G G     SS++  +V  L G  V+++A G  HSL +
Sbjct: 279 GQRGDGSTVYLSSSV--RVRWLSG--VVAMAAGSAHSLAV 314



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 134/296 (45%), Gaps = 47/296 (15%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AG  H++ +  DG   A+G N  GQLG GS  +  EP  VR L S V A + G   +  L
Sbjct: 3   AGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGL-SGVVAVSAGEGHS--L 59

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +     ++   G    GQLG GT + ++               P  +  L+G  +V V+ 
Sbjct: 60  ALHRDGTVWAWGDNALGQLGDGTSDSHS--------------EPVRVPGLSG--VVAVSA 103

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSV 295
           G NH++A+ S G V+ WG     +LG       + VP R++       L     ++AG  
Sbjct: 104 GDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYSVPWRLE------DLSEVVAVAAGGN 157

Query: 296 NSSCTAGGGQLYMWGK--LKNNGDD------WMYPKPLMDLSGWNLRCMDSGNMHHFVG- 346
           +S      G ++ WG       GD       W+ PK +  LSG  +    +G  H  V  
Sbjct: 158 HSLAVRADGTVWAWGDNFAGQLGDGNILTTRWL-PKQVQGLSG--VVAASAGWAHSMVAL 214

Query: 347 ADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +D S  +WG+   G+LG G    YG    A+P++V  L G  V++VA G  +SL +
Sbjct: 215 SDGSVWAWGNNTSGQLGNGISVGYG----ALPEQVQGLRG--VMAVAAGGLYSLAL 264



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 55/114 (48%), Gaps = 8/114 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L GV   F        H +AV  +G  + WG N  GQLG G       P  V  
Sbjct: 542 PVRVQGLSGVAAVFAGL----NHSLAVRTDGSVWAWGINSFGQLGEGTTNTSFAPVRVQG 597

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           LS   ++   AG  H++ V  DG+  ++G N HGQLG G       P+PVR L+
Sbjct: 598 LSG--METVAAGSLHSLSVGSDGSMWSWGNNHHGQLGHGLPGR--SPTPVRSLL 647



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 82/174 (47%), Gaps = 20/174 (11%)

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +A GT+H++A+   G V+ WG    G+LG         P RV        L     +SAG
Sbjct: 1   MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSDSHSEPVRV------RGLSGVVAVSAG 54

Query: 294 SVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-V 345
             +S      G ++ W     G+L +   D  + +P+    LSG  +  + +G+ H   +
Sbjct: 55  EGHSLALHRDGTVWAWGDNALGQLGDGTSD-SHSEPVRVPGLSG--VVAVSAGDNHSLAL 111

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +D S  +WG     +LG  P G +S ++P +++ L    V++VA G  HSL +
Sbjct: 112 RSDGSVWAWGDNNSDQLGGAP-GAQSYSVPWRLEDLS--EVVAVAAGGNHSLAV 162


>gi|348504160|ref|XP_003439630.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
           [Oreochromis niloticus]
          Length = 1369

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 114/238 (47%), Gaps = 23/238 (9%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           G+ YTWG++ RGQLG G +    R P  V  LS   + +  AG   +  ++  G   ++G
Sbjct: 631 GQLYTWGQDCRGQLGLGTRKSVCRSPQHVPSLSAIPLIQVAAGGDQSFALSVSGGVFSWG 690

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA------SILNAG 188
            N  GQLG G  ++   P+PV+CL + +    +CG D T  L+   G       ++   G
Sbjct: 691 RNDCGQLGLGDTKDRHTPAPVQCLNMKKAQHISCGQDHTAILTKSSGXXXXXXXAVFTFG 750

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             Q+GQLGH               +   + RPR +A L G  + K+ CG NHT+A+    
Sbjct: 751 SGQHGQLGHN--------------SLRNELRPRLVAELWGAKVTKITCGRNHTLALTESK 796

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            VY++G    G+LGHRE+ +  VP  V + Q  + L    +  AG   S  T    ++
Sbjct: 797 QVYSFGCEDQGQLGHREESNPSVPLPVRLPQETSELKIRNIF-AGENCSFATCSSDEI 853



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 91/194 (46%), Gaps = 15/194 (7%)

Query: 13  ETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
           E+GK   G+L   G  C   +G   G       SP  +  L  + +  VAAG       A
Sbjct: 624 ESGKVLYGQLYTWGQDCRGQLGL--GTRKSVCRSPQHVPSLSAIPLIQVAAG--GDQSFA 679

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS- 131
           + V G  ++WGRN+ GQLG GD   R  P  V  L+  K +    G+ HT ++T+     
Sbjct: 680 LSVSGGVFSWGRNDCGQLGLGDTKDRHTPAPVQCLNMKKAQHISCGQDHTAILTKSSGXX 739

Query: 132 -------LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
                    FG  +HGQLG  S+RNE+ P  V  L  ++VT   CG + T+ L+  E   
Sbjct: 740 XXXXXAVFTFGSGQHGQLGHNSLRNELRPRLVAELWGAKVTKITCGRNHTLALT--ESKQ 797

Query: 184 ILNAGLPQYGQLGH 197
           + + G    GQLGH
Sbjct: 798 VYSFGCEDQGQLGH 811



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 66/303 (21%), Positives = 114/303 (37%), Gaps = 72/303 (23%)

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWN--KHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
           + I    AGR+    V  +GN+     N  K G+   G  R +           ++ A +
Sbjct: 561 HHIADLSAGRNVLAFVKSNGNAFIIRTNESKDGRRARG--RQKFVKHK-----EKIEAVS 613

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQ-----LGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           CG D    LS  E   +L   L  +GQ     LG GT      + S  +        P+ 
Sbjct: 614 CGDDVVALLS--ESGKVLYGQLYTWGQDCRGQLGLGT------RKSVCR-------SPQH 658

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           + +L+   +++VA G + + A+   G V++WG    G+LG  + KD           R+ 
Sbjct: 659 VPSLSAIPLIQVAAGGDQSFALSVSGGVFSWGRNDCGQLGLGDTKD-----------RHT 707

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
             P + +    + + SC    GQ +     K++G                          
Sbjct: 708 PAPVQCLNMKKAQHISC----GQDHTAILTKSSGXX------------------------ 739

Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                  +  ++G  Q+G+LG+     ++   P+ V  L G  V  + CG  H+L + + 
Sbjct: 740 --XXXXXAVFTFGSGQHGQLGHN--SLRNELRPRLVAELWGAKVTKITCGRNHTLALTES 795

Query: 403 TNV 405
             V
Sbjct: 796 KQV 798


>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
           ubiquitin ligase, partial [Rhipicephalus pulchellus]
          Length = 1181

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 161/334 (48%), Gaps = 38/334 (11%)

Query: 80  YTWGRNERGQLGHGD-KIQRDRPTIVSELSKYK------IKKAGAGRSHTVVVTEDGNSL 132
           Y+WG    G+LG    K   D  T VS+  + +      +++   G  HT+V+  +G+  
Sbjct: 54  YSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSVY 113

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
           + G N  GQLG      ++E         E+ A ACG   ++ LS  +   + + G  + 
Sbjct: 114 SCGANDFGQLGQDRSMRKLEQVAALS-AHEIRAVACGEAHSLALS--DAGQVFSWGCNRN 170

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG GT+              E++ RP+ I  LA   IV++ACG  H +A+ + G +++
Sbjct: 171 GQLGCGTEE-------------ESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFS 217

Query: 253 WGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           WG    G+  LG     +E +PRRV     + V  P A+++ G+++S      G +++WG
Sbjct: 218 WGGNASGQLGLGRDSTGNERLPRRVS----HLVGVPLALVACGAMHSVGLTPSGTVFVWG 273

Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
           +        ++  D ++P  L  L    ++ +  G  H   + AD    ++G   YG+LG
Sbjct: 274 RNSCGQLGLSDQRDRLHPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLG 333

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +G   + + A+P++V  L G  +  ++CG  H++
Sbjct: 334 HGV--KVNEAVPRRVVELMGTAISQLSCGRCHTV 365



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 140/297 (47%), Gaps = 32/297 (10%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            G +  CG+  +  +G+     D ++    ++  L   +IR VA G    H +A+   G+
Sbjct: 109 NGSVYSCGANDFGQLGQ-----DRSMRKLEQVAALSAHEIRAVACG--EAHSLALSDAGQ 161

Query: 79  CYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            ++WG N  GQLG G ++  R RP ++ +L+   I +   G  H + +  +G   ++G N
Sbjct: 162 VFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGELFSWGGN 221

Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             GQLG G  S  NE  P  V  LV   +   ACGA  +V L+     ++   G    GQ
Sbjct: 222 ASGQLGLGRDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLTP--SGTVFVWGRNSCGQ 279

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG          D   +L       P  +  L  + I  V CG NHT A+ + G V+T+G
Sbjct: 280 LG--------LSDQRDRL------HPTVLKPLRSQRIKHVCCGENHTAALTADGGVFTFG 325

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA-GGGQLYMWG 310
            G YG+LGH  + +E VPRRV       +    + +S G  ++   A   G+LY++G
Sbjct: 326 AGTYGQLGHGVKVNEAVPRRVVELMGTAI----SQLSCGRCHTVAYAPQSGRLYIFG 378



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 156/341 (45%), Gaps = 32/341 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+R      +R VA G    H + +   G  Y+ G N+ GQLG    +++     V+ 
Sbjct: 82  PERVRRFGTRAVREVACG--HKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQ--VAA 137

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVT 164
           LS ++I+    G +H++ +++ G   ++G N++GQLG G+   + + P  ++ L +  + 
Sbjct: 138 LSAHEIRAVACGEAHSLALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHIV 197

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACGA   + L++     + + G    GQLG G D+  N +             PR ++
Sbjct: 198 QIACGAVHCLALAN--NGELFSWGGNASGQLGLGRDSTGNER------------LPRRVS 243

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L G  +  VACG  H+V +   G V+ WG    G+LG  +Q+D   P  +   +   + 
Sbjct: 244 HLVGVPLALVACGAMHSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHPTVLKPLRSQRI- 302

Query: 285 PPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGD-DWMYPKPLMDLSGWNLRCMDSG 339
             + V    +  ++ TA GG        +G+L +    +   P+ +++L G  +  +  G
Sbjct: 303 --KHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAISQLSCG 360

Query: 340 NMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKV 378
             H    A  S     +G    G+LG G    +SSA+P  V
Sbjct: 361 RCHTVAYAPQSGRLYIFGLGMSGQLGNGTL--ESSALPVTV 399



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 80/159 (50%), Gaps = 4/159 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN   P R+  LVGV +  VA G +  H V +   G  + WGRN  GQLG  D+  R  P
Sbjct: 234 GNERLPRRVSHLVGVPLALVACGAM--HSVGLTPSGTVFVWGRNSCGQLGLSDQRDRLHP 291

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
           T++  L   +IK    G +HT  +T DG    FG   +GQLG G   NE  P  V  L+ 
Sbjct: 292 TVLKPLRSQRIKHVCCGENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMG 351

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           + ++  +CG   TV  +   G  +   GL   GQLG+GT
Sbjct: 352 TAISQLSCGRCHTVAYAPQSG-RLYIFGLGMSGQLGNGT 389



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 40/113 (35%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + PT L+PL    I+ V  G    H  A+  +G  +T+G    GQLGHG K+    P  V
Sbjct: 289 LHPTVLKPLRSQRIKHVCCG--ENHTAALTADGGVFTFGAGTYGQLGHGVKVNEAVPRRV 346

Query: 105 SELSKYKIKKAGAGRSHTVV-VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            EL    I +   GR HTV    + G    FG    GQLG+G++ +   P  V
Sbjct: 347 VELMGTAISQLSCGRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTV 399



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 68/164 (41%), Gaps = 17/164 (10%)

Query: 250 VYTWGFGGYGRLGHREQKD-------EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           +Y+WG G  G LG  + KD          P RV  F    V      ++ G  ++     
Sbjct: 53  LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVRE----VACGHKHTLVLLA 108

Query: 303 GGQLYMWG--KLKNNGDDWMYPK--PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHA 357
            G +Y  G       G D    K   +  LS   +R +  G  H    +D+    SWG  
Sbjct: 109 NGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALSDAGQVFSWGCN 168

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + G+LG G   ++S   PK +  L  +H++ +ACG  H L + +
Sbjct: 169 RNGQLGCGT-EEESRLRPKVIKKLATLHIVQIACGAVHCLALAN 211


>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
 gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
          Length = 487

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 159/356 (44%), Gaps = 47/356 (13%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C S +  A+   G    WG    GQLG G+      P +   LS   + +      HT  
Sbjct: 49  CGSNYSAAITNSGDLILWGYGGCGQLGFGNLEDCLVPRV--NLSLKNVVQVACSDRHTAA 106

Query: 125 VTEDGNSLAFGWNKHGQLGSG----SIRNEI--EPSPVRCLVSE-VTATACGADFTVWLS 177
           +  +G    +G +K+G+LG G    SI N +  +P  V+ L  E V   +CG+  T  L+
Sbjct: 107 ILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLT 166

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             + A  L  GL   G+LGHG   +  T              P+ I +LAG  I +++CG
Sbjct: 167 DDKKA--LTWGLGLQGRLGHGDTQDIFT--------------PKLIESLAGLPIKEISCG 210

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISAG 293
            +HT  +   G +Y +G G +G+LG     D  +PR ++        P E +    +S G
Sbjct: 211 GHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEG-------PLEDIQITKVSLG 263

Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
           S +S+     G++Y WG+             D++ PK L +L    +  +  GN H    
Sbjct: 264 SQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLSPKRLSNLEKAFIVDISCGNSHSVAL 323

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           +D   I +WG  +   +G+G  G   + MP K  IL+  +++ V C   HS+ + D
Sbjct: 324 SDVGDIYTWGMTK--NIGHGIQGIHPN-MPSKHPILQNKNIVQVVCSSSHSIALSD 376



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 123/279 (44%), Gaps = 34/279 (12%)

Query: 50  LRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---KIQRD---RPT 102
           L P V + ++  V   C   H  A+   G  YTWG ++ G+LGHG     I  +   +P 
Sbjct: 83  LVPRVNLSLKNVVQVACSDRHTAAILSNGELYTWGCSKNGKLGHGQFELSISNNVVSQPM 142

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
            V  L   K+ +   G  HT  +T+D  +L +G    G+LG G  ++   P  +  L   
Sbjct: 143 KVKALEGEKVIQVSCGSYHTGCLTDDKKALTWGLGLQGRLGHGDTQDIFTPKLIESLAGL 202

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            +   +CG   T  L       +   G   +G+LG G+     T D  +         PR
Sbjct: 203 PIKEISCGGHHTAILLVTGKLYMFGGG--AFGKLGFGS-----TDDVLI---------PR 246

Query: 222 AI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR---EQKDEWVPRRVDV 277
            +   L    I KV+ G+ H+ AV   G VYTWG G  GRLGH     + D   P+R+  
Sbjct: 247 LLEGPLEDIQITKVSLGSQHSAAVTKCGKVYTWGQG--GRLGHIFNGPEHDFLSPKRLSN 304

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
            ++  ++     IS G+ +S   +  G +Y WG  KN G
Sbjct: 305 LEKAFIVD----ISCGNSHSVALSDVGDIYTWGMTKNIG 339



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 118/260 (45%), Gaps = 33/260 (12%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           G+ + ++  N+VS P +++ L G  +  V+ G     C+  D   +  TWG   +G+LGH
Sbjct: 127 GQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDD--KKALTWGLGLQGRLGH 184

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
           GD      P ++  L+   IK+   G  HT ++   G    FG    G+LG GS  + + 
Sbjct: 185 GDTQDIFTPKLIESLAGLPIKEISCGGHHTAILLVTGKLYMFGGGAFGKLGFGSTDDVLI 244

Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP----QYGQLGH---GTDNEYNT 205
           P  +   + ++  T       V L S   A++   G      Q G+LGH   G ++++ +
Sbjct: 245 PRLLEGPLEDIQITK------VSLGSQHSAAVTKCGKVYTWGQGGRLGHIFNGPEHDFLS 298

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                         P+ ++ L    IV ++CG +H+VA+   G +YTWG      +GH  
Sbjct: 299 --------------PKRLSNLEKAFIVDISCGNSHSVALSDVGDIYTWGM--TKNIGHGI 342

Query: 266 QK-DEWVPRRVDVFQRNNVL 284
           Q     +P +  + Q  N++
Sbjct: 343 QGIHPNMPSKHPILQNKNIV 362



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 36/227 (15%)

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAVDS 246
           G  +YGQ  HG+  E            E  P P  +  L    +I KV+CG+N++ A+ +
Sbjct: 14  GSSEYGQ--HGSKGE------------EVSPGPHLVDGLRHLSSISKVSCGSNYSAAITN 59

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G +  WG+GG G+LG    +D  VP RV++  +N V      ++    +++     G+L
Sbjct: 60  SGDLILWGYGGCGQLGFGNLEDCLVP-RVNLSLKNVV-----QVACSDRHTAAILSNGEL 113

Query: 307 YMWGKLKN------------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCIS 353
           Y WG  KN            + +    P  +  L G  +  +  G+ H   +  D   ++
Sbjct: 114 YTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTDDKKALT 173

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           WG    G LG+G    +    PK ++ L G+ +  ++CG  H+ +++
Sbjct: 174 WGLGLQGRLGHGD--TQDIFTPKLIESLAGLPIKEISCGGHHTAILL 218



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%)

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           SK  V  WG   YG+ G + ++    P  VD  +    L   + +S GS  S+     G 
Sbjct: 6   SKSGVVVWGSSEYGQHGSKGEEVSPGPHLVDGLRH---LSSISKVSCGSNYSAAITNSGD 62

Query: 306 LYMWG-----KLK-NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           L +WG     +L   N +D + P+  ++LS  N+  +   + H   + ++    +WG ++
Sbjct: 63  LILWGYGGCGQLGFGNLEDCLVPR--VNLSLKNVVQVACSDRHTAAILSNGELYTWGCSK 120

Query: 359 YGELGYGPYGQKSS----AMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G+LG+G +    S    + P KV  LEG  VI V+CG  H+  + D
Sbjct: 121 NGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGCLTD 167


>gi|380018612|ref|XP_003693221.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
           florea]
          Length = 541

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 126/272 (46%), Gaps = 25/272 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L G DI+  A G    H +A+  EG+ Y+WG+N   +LG+    Q   P I++ 
Sbjct: 67  PKKIKELCGKDIKTFAYG-KGPHVLALTKEGKVYSWGQNCHYELGNTFGSQALTPAIITN 125

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----E 162
           L    I     G  H++ +T DG   A+G N  GQ+G   I   ++  P +   +    +
Sbjct: 126 LCNEFIVDVACGSHHSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKLNFTLTGKK 185

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   +CG  F+V +++     + + G    GQLG   +N               Q  P  
Sbjct: 186 VICISCGDSFSVVVTN--NGEVYSWGRNDVGQLGIENNN-------------NDQFHPCR 230

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE---QKDEWVPRRVDVFQ 279
           I AL    I KV CG+ HT+A+  +G +Y WG   YG+LG        + W P +++V +
Sbjct: 231 ITALTKVVIEKVVCGSIHTLALSDEGVLYVWGANNYGQLGLTTVLLNTNIWKPTKLEVPE 290

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              VL  +   S  +  S     G +++MWG+
Sbjct: 291 MRRVL--DIATSYYNYISIALCEGNRIFMWGQ 320



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 129/293 (44%), Gaps = 38/293 (12%)

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
           ++VT D    A G N  G LG+G  ++ + P  ++ L        CG D   +    +G 
Sbjct: 37  LIVTNDKMVYAVGSNTSGCLGTGDTQSTLYPKKIKEL--------CGKDIKTFAYG-KGP 87

Query: 183 SILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
            +L   L + G++   G     E      S  L       P  I  L  E IV VACG++
Sbjct: 88  HVL--ALTKEGKVYSWGQNCHYELGNTFGSQALT------PAIITNLCNEFIVDVACGSH 139

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKD--EWVPRRVDVFQRNNVLPPEAV--ISAGSV 295
           H++A+ + G VY WG    G++G  +     + +PR++     N  L  + V  IS G  
Sbjct: 140 HSLALTNDGEVYAWGQNTSGQVGCHDITTLVQDIPRKL-----NFTLTGKKVICISCGDS 194

Query: 296 NSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
            S      G++Y WG+       ++NN +D  +P  +  L+   +  +  G++H    +D
Sbjct: 195 FSVVVTNNGEVYSWGRNDVGQLGIENNNNDQFHPCRITALTKVVIEKVVCGSIHTLALSD 254

Query: 349 SSCIS-WGHAQYGELGYGPYGQKSSA-MPKKVDILEGMHVISVACGYGHSLVI 399
              +  WG   YG+LG       ++   P K+++ E   V+ +A  Y + + I
Sbjct: 255 EGVLYVWGANNYGQLGLTTVLLNTNIWKPTKLEVPEMRRVLDIATSYYNYISI 307



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 22/254 (8%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR- 119
           V  G +    + V  +   Y  G N  G LG GD      P  + EL    IK    G+ 
Sbjct: 27  VVYGNIGNEALIVTNDKMVYAVGSNTSGCLGTGDTQSTLYPKKIKELCGKDIKTFAYGKG 86

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
            H + +T++G   ++G N H +LG+      + P+ +  L +E +   ACG+  ++ L++
Sbjct: 87  PHVLALTKEGKVYSWGQNCHYELGNTFGSQALTPAIITNLCNEFIVDVACGSHHSLALTN 146

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACG 237
                +   G    GQ+G               +    Q  PR +   L G+ ++ ++CG
Sbjct: 147 --DGEVYAWGQNTSGQVG------------CHDITTLVQDIPRKLNFTLTGKKVICISCG 192

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
            + +V V + G VY+WG    G+LG      D++ P R+    +   +  E V+  GS++
Sbjct: 193 DSFSVVVTNNGEVYSWGRNDVGQLGIENNNNDQFHPCRITALTK---VVIEKVV-CGSIH 248

Query: 297 SSCTAGGGQLYMWG 310
           +   +  G LY+WG
Sbjct: 249 TLALSDEGVLYVWG 262


>gi|383453805|ref|YP_005367794.1| hypothetical protein COCOR_01791, partial [Corallococcus
           coralloides DSM 2259]
 gi|380728287|gb|AFE04289.1| hypothetical protein COCOR_01791 [Corallococcus coralloides DSM
           2259]
          Length = 827

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 169/359 (47%), Gaps = 41/359 (11%)

Query: 50  LRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           +RP+ G+ D+R V+AG  + H +A+  +G  + WG N  GQLG G K  R  P  V  L+
Sbjct: 168 VRPVPGLTDVRAVSAG--NEHALALRTDGTVWAWGSNFAGQLGDGTKTSRSTPVQVVGLT 225

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
           +  I  + AG S ++ + +DG   A+G N+ GQLG G++   + P  V  LV  VT  A 
Sbjct: 226 EV-IAVSAAGYS-SLALRKDGTVWAWGDNESGQLGDGTMEGRLTPVQVLDLV-RVTGLAA 282

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
           G   +  L+ +   ++   G   YGQLG G              + E  PRP A++ L  
Sbjct: 283 GRGHS--LAVLADGTVRAWGANIYGQLGDG------------GFSLEGNPRPVAVSKL-- 326

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
             +V VA  T+ + AV S G V +WG    G LG  ++ +  VP +  VF   +V    A
Sbjct: 327 TDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSK--VFGLTDV----A 380

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGD--DWMY----PKPLMDLSGWNLRCMDSGNMH 342
            +S G   +    G G +  WG   ++G   D  Y    P P+  L+G  +  + +G  H
Sbjct: 381 TVSVGGYYAVALMGDGTVRSWGN-NDSGQLGDGTYIRHTPTPVPGLTG--VTAVSAGEDH 437

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              V +D S   WG  Q+ +LG  P        P +V  L    +  VA G  HSL ++
Sbjct: 438 VVAVLSDGSPRVWGDNQFMQLGRPPESVNRGG-PVQVPGLTEASL--VAAGKTHSLALL 493



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 169/402 (42%), Gaps = 60/402 (14%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           DG   S +    +VG+    +A        +A+  +G  + WG NE GQLG G    R  
Sbjct: 209 DGTKTSRSTPVQVVGL-TEVIAVSAAGYSSLALRKDGTVWAWGDNESGQLGDGTMEGRLT 267

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-- 158
           P  V +L   ++    AGR H++ V  DG   A+G N +GQLG G    E  P PV    
Sbjct: 268 PVQVLDL--VRVTGLAAGRGHSLAVLADGTVRAWGANIYGQLGDGGFSLEGNPRPVAVSK 325

Query: 159 ---LVSEVTAT----ACGADFTV--WLSSVEG----------------------ASILNA 187
              +VS   +T    A  +D TV  W S+V+G                      A++   
Sbjct: 326 LTDVVSVAASTSLSFAVHSDGTVSSWGSNVDGALGVEQRSNSRVPSKVFGLTDVATVSVG 385

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--PRAIAALAGETIVKVACGTNHTVAVD 245
           G      +G GT   +   DS  +L      R  P  +  L G  +  V+ G +H VAV 
Sbjct: 386 GYYAVALMGDGTVRSWGNNDSG-QLGDGTYIRHTPTPVPGLTG--VTAVSAGEDHVVAVL 442

Query: 246 SKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
           S G    WG   + +LG   E  +   P +V            ++++AG  +S      G
Sbjct: 443 SDGSPRVWGDNQFMQLGRPPESVNRGGPVQVPGLTE------ASLVAAGKTHSLALLADG 496

Query: 305 QLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQ 358
            ++ WG      L    +    P P+       +R + +G N    V A+ + ++WG+  
Sbjct: 497 TVWAWGDNSFSALGLGDEPGASPTPVQVPKLAGVRSLAAGENSSLAVLANGTVMAWGYGL 556

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMH-VISVACGYGHSLVI 399
           +G+L     G +S+++ +  + + G+  + +VA G+ +SL +
Sbjct: 557 FGQL-----GSESASIFQIPEPIFGLSGITAVAMGHWYSLAL 593



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 109/276 (39%), Gaps = 70/276 (25%)

Query: 51  RPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
            P+ G+  I  VA G    + +A+  +G  ++WG N  GQLG G   +R RP  V+ L++
Sbjct: 572 EPIFGLSGITAVAMG--HWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGLTQ 629

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
                AGA  SH + +  DG   A+G N  G LG G+  +   P  V+ L   V A A G
Sbjct: 630 VTAIAAGA--SHALALRADGTVWAWGSNALGTLGDGTQTSRSTPVQVQGLTG-VIAVAAG 686

Query: 170 --------ADFTVW----------------------------------------LSSVEG 181
                    D TVW                                        L++VEG
Sbjct: 687 EYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLAGVQRIAAGEKHALAAVEG 746

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             ++  G    GQLG G   E  ++     L       PR IAA           G  HT
Sbjct: 747 GPLVAFGKNTSGQLGLGERKENQSRGEIASLR-----NPRGIAA-----------GIAHT 790

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           +AV + G V+ WG    G+LG+ E  +   P  V +
Sbjct: 791 LAVAADGTVWAWGANATGQLGNGEAANSPQPITVKL 826



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 135/329 (41%), Gaps = 44/329 (13%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P ++  L GV  R +AAG  S   +AV   G    WG    GQLG         P  + 
Sbjct: 520 TPVQVPKLAGV--RSLAAGENSS--LAVLANGTVMAWGYGLFGQLGSESASIFQIPEPIF 575

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            LS   I     G  +++ + EDG   ++G+N  GQLG G+      P  V  L ++VTA
Sbjct: 576 GLSG--ITAVAMGHWYSLALREDGTVWSWGYNASGQLGDGTTDERPRPGQVAGL-TQVTA 632

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A GA   + L +    ++   G    G LG GT    +T              P  +  
Sbjct: 633 IAAGASHALALRA--DGTVWAWGSNALGTLGDGTQTSRST--------------PVQVQG 676

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF---QRNN 282
           L G  ++ VA G  H++A+   G V++WG    G+LG         P +V      QR  
Sbjct: 677 LTG--VIAVAAGEYHSLALREDGTVWSWGNNNEGQLGDVTASSRQSPGQVPGLAGVQR-- 732

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG-----WNLRCMD 337
                  I+AG  ++     GG L  +GK   +G   +  +      G      N R + 
Sbjct: 733 -------IAAGEKHALAAVEGGPLVAFGK-NTSGQLGLGERKENQSRGEIASLRNPRGIA 784

Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYG 365
           +G  H   V AD +  +WG    G+LG G
Sbjct: 785 AGIAHTLAVAADGTVWAWGANATGQLGNG 813



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 8/114 (7%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIV 104
           SP ++  L GV  + +AAG    H +A    G    +G+N  GQLG G+ K  + R  I 
Sbjct: 720 SPGQVPGLAGV--QRIAAG--EKHALAAVEGGPLVAFGKNTSGQLGLGERKENQSRGEIA 775

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           S  +   I    AG +HT+ V  DG   A+G N  GQLG+G   N  +P  V+ 
Sbjct: 776 SLRNPRGIA---AGIAHTLAVAADGTVWAWGANATGQLGNGEAANSPQPITVKL 826


>gi|24655113|ref|NP_728591.1| CG9153, isoform A [Drosophila melanogaster]
 gi|24655115|ref|NP_612098.2| CG9153, isoform B [Drosophila melanogaster]
 gi|23092754|gb|AAF47474.2| CG9153, isoform A [Drosophila melanogaster]
 gi|23092755|gb|AAF47475.2| CG9153, isoform B [Drosophila melanogaster]
          Length = 1058

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 44/338 (13%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T  G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
            + QLG         P+    L+ E     +    CG+  ++ LS  +   +L+ G    
Sbjct: 68  DYSQLGHDL------PTKRPLLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDNDC 119

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLGH TD E       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166

Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           WG   YG+LG     D      P R+       +  P A I+ G  +S   +  G ++ W
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
           G+        N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+L
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+G     +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 26/249 (10%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
           G+   A D  +V  P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG 
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 92  --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
               D    + P  ++ L    +     G +H+ ++++ G    +G N  GQLG     N
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKD 207
              P+ ++ L +  V   ACG +F+V+L++  G     AG   YGQLGHG + NE     
Sbjct: 238 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---- 291

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQ 266
                       PR +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  
Sbjct: 292 -----------LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 267 KDEWVPRRV 275
           K   +P+ V
Sbjct: 341 KSLMLPQVV 349



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 35/371 (9%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            G+ L+C GST    +G   G  D  +++P+++       ++ VA G    H + +   G
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTATG 59

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + Y  G N+  QLGH   +   RP ++ EL  Y I +   G  H++ +++ G  L++G N
Sbjct: 60  KVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 138 KHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             GQLG  + +  ++ P  VR LV++ V   ACG + ++ L+S     + + G   YGQL
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQL 175

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  + N+    +            P  +  L G  +  +ACG NH+  +   G V+ WG 
Sbjct: 176 GVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WG 310
              G+LG  ++ +   P ++   +   V      ++ G   S      G ++      +G
Sbjct: 225 NNCGQLGLNDETNRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 311 KLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPY 367
           +L +    + M P+ +M+L G  +  +  GN H    V +     ++G    G+L  G  
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GTR 338

Query: 368 GQKSSAMPKKV 378
             KS  +P+ V
Sbjct: 339 STKSLMLPQVV 349


>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
 gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
          Length = 794

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 155/359 (43%), Gaps = 49/359 (13%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            C   H V V   GR +T+G NE GQLG G    R++PT V  L   KI    AGR HT+
Sbjct: 41  ACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAGRFHTL 100

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGA 182
            VT+     +FG    G LG G   +   P+ +  L   +V   ACG   +  ++  +  
Sbjct: 101 AVTDSNKLYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAIT--KNG 158

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            +   G    GQLG   D           ++Y     P  +    G++++ VACG  HT 
Sbjct: 159 ELYIWGSNSEGQLGLKNDT----------ISY-----PTMLD--LGKSVISVACGYYHTA 201

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSC- 299
            V + G +YT+G    G+LG            +   + + V  P+ V  IS   V  +C 
Sbjct: 202 VVTADGKLYTFGETEGGKLG------------LGDIEAHKVTKPKVVKGISGKVVKVACG 249

Query: 300 ------TAGGGQLYMWGKLKNN----GDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVG 346
                     GQ+Y +G  +N     G   M    PK +  LS   ++ +  G  H  V 
Sbjct: 250 GNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVV 309

Query: 347 ADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           +D     ++G  ++G+LG G     +   P KV  L+   V+ +ACG  H++V  ++ +
Sbjct: 310 SDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIVLHIACGGCHTIVACNKID 368



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/303 (28%), Positives = 139/303 (45%), Gaps = 37/303 (12%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACG 169
           K+     G  HTVVVTE+G    FG N+ GQLG GS +   +P+ V+ L  E +T  A G
Sbjct: 36  KVTDIACGDEHTVVVTENGRLFTFGNNEWGQLGIGSNKTRNKPTTVKALKPEKITHVAAG 95

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
              T  L+  +   + + G    G LGHG + + N               P +I +L  +
Sbjct: 96  RFHT--LAVTDSNKLYSFGQGSEGALGHGDETDLNM--------------PTSIESLEDK 139

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +  +ACG  H+ A+   G +Y WG    G+LG +     + P  +D+         ++V
Sbjct: 140 DVNIIACGGYHSAAITKNGELYIWGSNSEGQLGLKNDTISY-PTMLDL--------GKSV 190

Query: 290 ISA--GSVNSSCTAGGGQLYMWGKLKNN----GDDWMY----PKPLMDLSGWNLRCMDSG 339
           IS   G  +++     G+LY +G+ +      GD   +    PK +  +SG  ++    G
Sbjct: 191 ISVACGYYHTAVVTADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVKGISGKVVKVACGG 250

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           N    + A     ++G  Q G+LG G     S+ +PK V+ L    +  +ACG  H+ V+
Sbjct: 251 NHTVALTASGQVYTFGSGQNGQLGLGSKIMDSN-IPKLVEALSKRKIKHIACGESHTAVV 309

Query: 400 VDR 402
            D+
Sbjct: 310 SDK 312



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 67/131 (51%), Gaps = 4/131 (3%)

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSE 106
           T+ + + G+  + V   C   H VA+   G+ YT+G  + GQLG G KI     P +V  
Sbjct: 231 TKPKVVKGISGKVVKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIMDSNIPKLVEA 290

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVT 164
           LSK KIK    G SHT VV++ G    FG  +HG+LG G  S  N  +P  V+ L   + 
Sbjct: 291 LSKRKIKHIACGESHTAVVSDKGELFTFGDGRHGKLGQGDESFSNLFKPVKVQRLKEFIV 350

Query: 165 A-TACGADFTV 174
              ACG   T+
Sbjct: 351 LHIACGGCHTI 361



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 33/232 (14%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           K GEL   GS     +G     L  + +S PT    ++ +    ++  C   H   V  +
Sbjct: 156 KNGELYIWGSNSEGQLG-----LKNDTISYPT----MLDLGKSVISVACGYYHTAVVTAD 206

Query: 77  GRCYTWGRNERGQLGHGD----KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
           G+ YT+G  E G+LG GD    K+   +P +V  +S  K+ K   G +HTV +T  G   
Sbjct: 207 GKLYTFGETEGGKLGLGDIEAHKVT--KPKVVKGIS-GKVVKVACGGNHTVALTASGQVY 263

Query: 133 AFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLP 190
            FG  ++GQLG GS I +   P  V  L   ++   ACG   T  +S  +   +   G  
Sbjct: 264 TFGSGQNGQLGLGSKIMDSNIPKLVEALSKRKIKHIACGESHTAVVS--DKGELFTFGDG 321

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           ++G+LG G +            ++    +P  +  L    ++ +ACG  HT+
Sbjct: 322 RHGKLGQGDE------------SFSNLFKPVKVQRLKEFIVLHIACGGCHTI 361


>gi|157111251|ref|XP_001651453.1| hect E3 ubiquitin ligase [Aedes aegypti]
 gi|108878447|gb|EAT42672.1| AAEL005820-PA [Aedes aegypti]
          Length = 1057

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 37/335 (11%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           Y WG    G+LG G  I+ ++  +  E+       +++A  G SHT+++T+DG   + G 
Sbjct: 4   YCWGNTVHGELGLGG-IEDEQVLLPREMDWCHSSSVQQAACGTSHTLLLTKDGKLFSCGN 62

Query: 137 NKHGQLGSGS--IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
           N HGQLG  +  + N+  P  +  L +  VT  +CG   ++ L++     + + G    G
Sbjct: 63  NDHGQLGHDTDCLPNK-RPQFISSLENYIVTHVSCGTTHSLALTN--WGQVFSWGSNSIG 119

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLGH TD +  T              PR I  +A +T+V++A G  H++A+ + G +++W
Sbjct: 120 QLGHDTDLQTYTT-------------PRMIKTIATKTVVQIASGQFHSLALTNSGELFSW 166

Query: 254 GFGGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           G  GYG+LG     ++ V P  V    ++    P A I+ G  +S   +  G ++ WGK 
Sbjct: 167 GANGYGQLGLGTTGEKVVTPTLV----KSLAGIPIAFIACGGNHSFAVSKSGAIFGWGKN 222

Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYG 365
                  N+     +P+ L  L    +R +  G +   F+  +    + G   +G+LG+G
Sbjct: 223 TFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGTFGQLGHG 282

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               +   +P+ V  L G  +  +ACG  H+L  V
Sbjct: 283 TCSNE--ILPRMVFELMGSKITQIACGRRHTLAFV 315



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 120/261 (45%), Gaps = 23/261 (8%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G+L  CG+     +G     L      P  +  L    +  V+ G  + H +A+   G
Sbjct: 53  KDGKLFSCGNNDHGQLGHDTDCLPNK--RPQFISSLENYIVTHVSCG--TTHSLALTNWG 108

Query: 78  RCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           + ++WG N  GQLGH   +Q    P ++  ++   + +  +G+ H++ +T  G   ++G 
Sbjct: 109 QVFSWGSNSIGQLGHDTDLQTYTTPRMIKTIATKTVVQIASGQFHSLALTNSGELFSWGA 168

Query: 137 NKHGQLGSGSI-RNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           N +GQLG G+     + P+ V+ L    +   ACG + +  +S  +  +I   G   +GQ
Sbjct: 169 NGYGQLGLGTTGEKVVTPTLVKSLAGIPIAFIACGGNHSFAVS--KSGAIFGWGKNTFGQ 226

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG          +  V   +     P+ +  L    +  ++CG + +  +  +G V+T G
Sbjct: 227 LG---------LNDLVSRCF-----PQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCG 272

Query: 255 FGGYGRLGHREQKDEWVPRRV 275
            G +G+LGH    +E +PR V
Sbjct: 273 AGTFGQLGHGTCSNEILPRMV 293



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/157 (32%), Positives = 75/157 (47%), Gaps = 5/157 (3%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            GEL   G+  +  +G   G     +V+PT ++ L G+ I F+A G    H  AV   G 
Sbjct: 160 SGELFSWGANGYGQLGL--GTTGEKVVTPTLVKSLAGIPIAFIACG--GNHSFAVSKSGA 215

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            + WG+N  GQLG  D + R  P  +  L    ++    G   +  +T++G     G   
Sbjct: 216 IFGWGKNTFGQLGLNDLVSRCFPQQLKTLRNLGVRYISCGDDFSAFLTQEGGVFTCGAGT 275

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
            GQLG G+  NEI P  V  L+ S++T  ACG   T+
Sbjct: 276 FGQLGHGTCSNEILPRMVFELMGSKITQIACGRRHTL 312



 Score = 38.9 bits (89), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +L+ L  + +R+++ G        +  EG  +T G    GQLGHG       P +V E
Sbjct: 238 PQQLKTLRNLGVRYISCG--DDFSAFLTQEGGVFTCGAGTFGQLGHGTCSNEILPRMVFE 295

Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L   KI +   GR HT+  V   G    FG    GQLG G I N   P  VR
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGVGVISNYNTPQIVR 347


>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
          Length = 526

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 127/274 (46%), Gaps = 28/274 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H V    EG  +TWG N   QLG+G       P  I
Sbjct: 63  IEPRRLDSLSGKKIACLSYGS-GPHIVLATTEGEVFTWGHNAYSQLGNGTTNHGLVPCHI 121

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
            + LS   + +   G  H++V+T DG   A+G+N  GQ+GSGS  N  +P P R   S  
Sbjct: 122 STNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTAN--QPIPRRVTSSLQ 179

Query: 162 --EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
              V   ACG      ++ V+   +   G    GQLG G+                 Q  
Sbjct: 180 NKVVVNIACGQ--MCSMAVVDNGEVYVWGYNGNGQLGLGSSGN--------------QST 223

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  + AL G  + +VACG  HT+ +  +G VY WG   YG+LG   + ++  P  V V +
Sbjct: 224 PCRL-ALQGVRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV-VVE 281

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           ++ ++   A  SA +  S+    GG +YMWG+ +
Sbjct: 282 KDRIIEIAACHSAHT--SAAKTQGGHVYMWGQCR 313



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 137/307 (44%), Gaps = 33/307 (10%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           ++ SE     I++A   G+  +  +  T +      G N  G LG G +++ IEP  +  
Sbjct: 11  SLCSEEELQLIRQACVFGSAGNEVLYTTVNDEVFVLGTNCCGCLGLGDVQSTIEPRRLDS 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++   + G+   + L++ EG  +   G   Y QLG+GT N                
Sbjct: 71  LSGKKIACLSYGSGPHIVLATTEG-EVFTWGHNAYSQLGNGTTNH--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I+  L+ + +++VACG+ H++ + S G V+ WG+   G++G     ++ +PRRV 
Sbjct: 116 LVPCHISTNLSNKHVIEVACGSYHSLVLTSDGEVFAWGYNNSGQVGSGSTANQPIPRRVT 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPL-MDLSGW 331
              +N V+     I+ G + S      G++Y+WG   N     G       P  + L G 
Sbjct: 176 SSLQNKVV---VNIACGQMCSMAVVDNGEVYVWGYNGNGQLGLGSSGNQSTPCRLALQGV 232

Query: 332 NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV- 389
            ++ +  G  H  V  D   + +WG   YG+LG G    +S   P    ++E   +I + 
Sbjct: 233 RVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPV---VVEKDRIIEIA 289

Query: 390 ACGYGHS 396
           AC   H+
Sbjct: 290 ACHSAHT 296



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN  +P RL  L GV ++ VA G    H + +  EG+ Y WG N  GQLG G+K  +  P
Sbjct: 219 GNQSTPCRL-ALQGVRVQRVACG--YAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP 275

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           T V       I+ A    +HT      G
Sbjct: 276 TPVVVEKDRIIEIAACHSAHTSAAKTQG 303


>gi|21711763|gb|AAM75072.1| RE53774p [Drosophila melanogaster]
          Length = 1058

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 150/338 (44%), Gaps = 44/338 (13%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       +++   G  HT+ +T  G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPSQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
            + QLG         P+    L+ E     +    CG+  ++ LS  +   +L+ G    
Sbjct: 68  DYSQLGHDL------PTKRPLLIPELQDYVIIQICCGSRHSLALS--DWGQVLSWGDNDC 119

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLGH TD E       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+
Sbjct: 120 GQLGHATDKEI------VQL-------PKVVRQLVTKTVVQIACGNNHSLALTSCGELYS 166

Query: 253 WGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           WG   YG+LG     D      P R+       +  P A I+ G  +S   +  G ++ W
Sbjct: 167 WGSNIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGW 222

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGEL 362
           G+        N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+L
Sbjct: 223 GRNNCGQLGLNDETNRSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQL 282

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+G     +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 283 GHG--FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/249 (32%), Positives = 119/249 (47%), Gaps = 26/249 (10%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
           G+   A D  +V  P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG 
Sbjct: 120 GQLGHATDKEIVQLPKVVRQLVTKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGV 177

Query: 92  --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
               D    + P  ++ L    +     G +H+ ++++ G    +G N  GQLG     N
Sbjct: 178 NSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETN 237

Query: 150 EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKD 207
              P+ ++ L +  V   ACG +F+V+L++  G     AG   YGQLGHG + NE     
Sbjct: 238 RSYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---- 291

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQ 266
                       PR +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  
Sbjct: 292 -----------LPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQLGTRST 340

Query: 267 KDEWVPRRV 275
           K   +P+ V
Sbjct: 341 KSLMLPQVV 349



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 35/371 (9%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            G+ L+C GST    +G   G  D  +++P+++       ++ VA G    H + +   G
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPSQIPWTPDTAVQQVACG--HRHTLFLTATG 59

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + Y  G N+  QLGH   +   RP ++ EL  Y I +   G  H++ +++ G  L++G N
Sbjct: 60  KVYACGSNDYSQLGH--DLPTKRPLLIPELQDYVIIQICCGSRHSLALSDWGQVLSWGDN 117

Query: 138 KHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             GQLG  + +  ++ P  VR LV++ V   ACG + ++ L+S     + + G   YGQL
Sbjct: 118 DCGQLGHATDKEIVQLPKVVRQLVTKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQL 175

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  + N+    +            P  +  L G  +  +ACG NH+  +   G V+ WG 
Sbjct: 176 GVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WG 310
              G+LG  ++ +   P ++   +   V      ++ G   S      G ++      +G
Sbjct: 225 NNCGQLGLNDETNRSYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 311 KLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPY 367
           +L +    + M P+ +M+L G  +  +  GN H    V +     ++G    G+L  G  
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGRVYAFGLGSSGQL--GTR 338

Query: 368 GQKSSAMPKKV 378
             KS  +P+ V
Sbjct: 339 STKSLMLPQVV 349


>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
          Length = 1052

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 20/238 (8%)

Query: 42  GNLVSPTRLRPLVGVDIRFVA-AGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD 99
           G+  S TR  P+ G++   +    C + H +A +  G  + WG N  GQLG + ++    
Sbjct: 67  GHCRSRTRAEPVDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMP 126

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPVRC 158
            P +V  L+  ++ +   GRSH++ +T  G    +G N HGQLG GS    E +P  V+ 
Sbjct: 127 TPKMVKSLATKQVVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKL 186

Query: 159 LVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L    ++  +CGADF+   +     ++   G   +GQLG G     +T D         +
Sbjct: 187 LQGIPISHISCGADFS--FAVTPSGAVYGWGKNSFGQLGLG-----DTTD---------R 230

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P+P  + +L  + +  + CG +HT A+   G V+T+G G YG+LGH    +E +PR+V
Sbjct: 231 PQPTQLKSLRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKV 288



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/298 (30%), Positives = 136/298 (45%), Gaps = 32/298 (10%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
           I + G G +HT++V +DG   +FG N +GQLG    R   E  PV  L    +T  ACGA
Sbjct: 36  IVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAE--PVDGLEAHNITQVACGA 93

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T  L+  E   +   G    GQLG       N ++S +       P P+ + +LA + 
Sbjct: 94  QHT--LAQNEWGEVFAWGSNSNGQLG------LNVEESMM-------PTPKMVKSLATKQ 138

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-KDEWVPRRVDVFQRNNVLPPEAV 289
           +V++ACG +H++A+ + G +Y WG   +G+LG       E  P  V + Q      P + 
Sbjct: 139 VVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQG----IPISH 194

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHH 343
           IS G+  S      G +Y WGK        GD    P+P  L  L    +  +  G  H 
Sbjct: 195 ISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHT 254

Query: 344 -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +  D    ++G   YG+LG+      +  +P+KV  L G  V  + CG  H+L  V
Sbjct: 255 AALTRDGGVFTFGAGMYGQLGHC--TSANEMLPRKVLELMGTTVTQICCGRCHTLAFV 310



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 96/218 (44%), Gaps = 19/218 (8%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGR 119
           V   C   H +A+   G  Y WG N  GQLG G       +P +V  L    I     G 
Sbjct: 140 VQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETKPCLVKLLQGIPISHISCGA 199

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSS 178
             +  VT  G    +G N  GQLG G   +  +P+ ++ L    VT   CG D T  L+ 
Sbjct: 200 DFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRFQRVTYIRCGMDHTAALTR 259

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
             G     AG+  YGQLGH T                 +  PR +  L G T+ ++ CG 
Sbjct: 260 DGGVFTFGAGM--YGQLGHCTSAN--------------EMLPRKVLELMGTTVTQICCGR 303

Query: 239 NHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            HT+A V SKG +Y +G GG G+LG +   +   P+ V
Sbjct: 304 CHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLV 341



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 149/331 (45%), Gaps = 34/331 (10%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           +++  R  P   VD   V  GC   H + V  +G+ +++G N+ GQLGH     R  P  
Sbjct: 21  IITSPRASPFTLVD-DIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP-- 77

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLVS 161
           V  L  + I +   G  HT+   E G   A+G N +GQLG  ++   + P+P  V+ L +
Sbjct: 78  VDGLEAHNITQVACGAQHTLAQNEWGEVFAWGSNSNGQLGL-NVEESMMPTPKMVKSLAT 136

Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
            +V   ACG   ++ L++V    I   G   +GQLG G+     TK   VKL        
Sbjct: 137 KQVVQIACGRSHSMALTNV--GEIYCWGSNSHGQLGLGSSGTPETKPCLVKL-------- 186

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
                L G  I  ++CG + + AV   G VY WG   +G+LG  +  D   P ++   + 
Sbjct: 187 -----LQGIPISHISCGADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKSLRF 241

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKN-NGDDWMYPKPLMDLSGWNLR 334
             V      I  G  +++     G ++     M+G+L +    + M P+ +++L G  + 
Sbjct: 242 QRV----TYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVT 297

Query: 335 CMDSGNMHH--FVGADSSCISWGHAQYGELG 363
            +  G  H   FV +     ++G    G+LG
Sbjct: 298 QICCGRCHTLAFVPSKGRIYAFGLGGSGQLG 328



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 17/212 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  ++ L G+ I  ++ G  +    AV   G  Y WG+N  GQLG GD   R +PT +  
Sbjct: 181 PCLVKLLQGIPISHISCG--ADFSFAVTPSGAVYGWGKNSFGQLGLGDTTDRPQPTQLKS 238

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L   ++     G  HT  +T DG    FG   +GQLG  +  NE+ P  V  L+ + VT 
Sbjct: 239 LRFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSANEMLPRKVLELMGTTVTQ 298

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN----------TKDSSVKLAYE 215
             CG   T+     +G  I   GL   GQLG  +    N          T ++S+K   +
Sbjct: 299 ICCGRCHTLAFVPSKG-RIYAFGLGGSGQLGTKSTANVNSPQLVIGPWETSNNSIKDVKD 357

Query: 216 -AQPRPRAIAALAGETIV--KVACGTNHTVAV 244
            A     A++A+  + +V   + CG + + ++
Sbjct: 358 LATETAEALSAIQSKRVVVRNIFCGGDQSFSL 389



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 15/188 (7%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PRA      + IV+V CG NHT+ V   G ++++G   YG+LGH   +    P  VD  +
Sbjct: 25  PRASPFTLVDDIVQVGCGENHTILVMKDGKLFSFGLNDYGQLGHCRSRTRAEP--VDGLE 82

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-----NGDDWMYPKPLM--DLSGWN 332
            +N+      ++ G+ ++      G+++ WG   N     N ++ M P P M   L+   
Sbjct: 83  AHNI----TQVACGAQHTLAQNEWGEVFAWGSNSNGQLGLNVEESMMPTPKMVKSLATKQ 138

Query: 333 LRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
           +  +  G  H     +   I  WG   +G+LG G  G   +  P  V +L+G+ +  ++C
Sbjct: 139 VVQIACGRSHSMALTNVGEIYCWGSNSHGQLGLGSSGTPETK-PCLVKLLQGIPISHISC 197

Query: 392 GYGHSLVI 399
           G   S  +
Sbjct: 198 GADFSFAV 205


>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Ornithorhynchus anatinus]
          Length = 531

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 139/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G      + + + P +L  L G  I+ ++ G    H +    +G  Y
Sbjct: 42  EVFVFGVNCSNCLGTGD---NQSTIVPKKLELLSGKKIKSLSYGS-GPHVLLSTEDGIVY 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P  I + L   ++ +   G  H++ + +DG   A+G+N  
Sbjct: 98  AWGHNGYSQLGNGTTNQGIAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNC 157

Query: 140 GQLGSGSIRNEIEPSPV-RCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL +  V + ACG   T  ++ ++   +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +                Q  P  +AAL    ++++ CG  HT+A+  +G +Y WG   
Sbjct: 216 GNNGN--------------QLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANT 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + +   P ++ V ++  V+   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNLLSPAQIMV-EKERVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 135/311 (43%), Gaps = 40/311 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT       FG N    LG+G  ++ I P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEAIYVTHSDEVFVFGVNCSNCLGTGDNQSTIVPKKLEL 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LSGKKIKSLSYGSGPHVLLSTEDGI-VYAWGHNGYSQLGNGTTNQ--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  I   L  + + +VACG++H++A+   G VY WG+   G++G     ++  PR+V 
Sbjct: 116 IAPIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNCGQVGSGSTANQPTPRKV- 174

Query: 277 VFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMD 327
                N L  + V+S   G  +S      G++Y WG        L NNG+  + P  +  
Sbjct: 175 ----TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAA 229

Query: 328 LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           L    +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V
Sbjct: 230 LHSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIMVEKERV 286

Query: 387 ISV-ACGYGHS 396
           + + AC   H+
Sbjct: 287 VEIAACHSAHT 297



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 52/188 (27%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ +  L+G+ I  ++ G+  H +     G VY WG  GY +LG+        P ++   
Sbjct: 65  PKKLELLSGKKIKSLSYGSGPHVLLSTEDGIVYAWGHNGYSQLGNGTTNQGIAPIQICT- 123

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
             N ++     ++ GS +S   A  G++Y                               
Sbjct: 124 --NLMIKQVTEVACGSHHSMALADDGEVY------------------------------- 150

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSL 397
                         +WG+   G++G G    + +  P+KV + L    V+S+ACG   S+
Sbjct: 151 --------------AWGYNNCGQVGSGSTANQPT--PRKVTNCLHIKRVVSIACGQTSSM 194

Query: 398 VIVDRTNV 405
            ++D   V
Sbjct: 195 AVLDNGEV 202


>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
 gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
          Length = 1152

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 123/248 (49%), Gaps = 23/248 (9%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA----GRSHTVV 124
           H +A+  EG  Y+WG  + G+LGHGD   R+ PT+V  LS  ++ +       G +++  
Sbjct: 250 HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGSTYSAA 309

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
           +T DG    +G   +G+LG GS  +++ P+ V  L    V    CG+     L+  +  +
Sbjct: 310 ITADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDICCGSGDAQTLAVTDDGT 369

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           + + G   YG+LG G  +   T              P+ I  L G+ IV+V CG   ++A
Sbjct: 370 VWSWGDGDYGKLGRGGSDGCKT--------------PKIIDRLQGQDIVRVCCGAQFSLA 415

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           +   G+++TWG G   RLGH  ++    P++++  +   V+     ++ GS++       
Sbjct: 416 LTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVD----VAVGSMHCLVMTEE 471

Query: 304 GQLYMWGK 311
           G++Y WG+
Sbjct: 472 GEVYGWGR 479



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 161/369 (43%), Gaps = 49/369 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIV 104
           P  +  L   ++  VAA     H +A+  EG  Y+WG  + G+LGHGD     + +  +V
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV 239

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-- 162
                +   K      H + +T +G   ++G    G+LG G   +  EP+ VR L  +  
Sbjct: 240 IVYPYHPEGK------HYMALTSEGEVYSWGNGDGGRLGHGDTNSREEPTLVRGLSGKQL 293

Query: 163 ---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
              V    CG+ ++  +++     +   G   YG+LGHG+               E Q  
Sbjct: 294 GRHVVHIVCGSTYSAAITA--DGELFTWGRGNYGRLGHGSS--------------EDQLT 337

Query: 220 PRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P  + +L G  ++ + CG+    T+AV   G V++WG G YG+LG         P+ +D 
Sbjct: 338 PTLVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDR 397

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWM-YPKPLMDLSGW 331
            Q  +++     +  G+  S      G ++ WGK     L +  ++ + +PK L  L G 
Sbjct: 398 LQGQDIVR----VCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGK 453

Query: 332 NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS--SAMPKKVDILEGMHVIS 388
            +  +  G+MH  V  +   +  WG    G+LG   +  KS  + MP     L+G  +  
Sbjct: 454 KVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMP-----LDGKSISG 508

Query: 389 VACGYGHSL 397
           +ACG   S 
Sbjct: 509 IACGPAQSF 517



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 77/318 (24%), Positives = 132/318 (41%), Gaps = 36/318 (11%)

Query: 101 PTIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           P ++  L+  ++ K  A     H + +T +G   ++G    G+LG G      +   V  
Sbjct: 180 PQLMESLADKEVLKVAAHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNVCYKGQKVLV 239

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V        G  +    S  E   + + G    G+LGHG  N              ++ 
Sbjct: 240 IVYPYHPE--GKHYMALTSEGE---VYSWGNGDGGRLGHGDTN--------------SRE 280

Query: 219 RPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
            P  +  L+G+     +V + CG+ ++ A+ + G ++TWG G YGRLGH   +D+  P  
Sbjct: 281 EPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPTL 340

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPKPLMDL 328
           V   +   V+  +    +G   +      G ++ W     GKL   G D    PK +  L
Sbjct: 341 VVSLKGRRVI--DICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRL 398

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G ++  +  G         +  I +WG      LG+G   ++    PK+++ L G  V+
Sbjct: 399 QGQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGT--EEHIRFPKQLEGLRGKKVV 456

Query: 388 SVACGYGHSLVIVDRTNV 405
            VA G  H LV+ +   V
Sbjct: 457 DVAVGSMHCLVMTEEGEV 474



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  +  L G DI  V   C +   +A+   G  +TWG+ +  +LGHG +     P  + 
Sbjct: 391 TPKIIDRLQGQDI--VRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLE 448

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L   K+     G  H +V+TE+G    +G N  GQLG  S   + +P+ +      ++ 
Sbjct: 449 GLRGKKVVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSDPTLMPLDGKSISG 508

Query: 166 TACG-ADFTVWLSS 178
            ACG A    W S+
Sbjct: 509 IACGPAQSFCWTST 522



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 106/269 (39%), Gaps = 37/269 (13%)

Query: 5   EAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSPT 48
           E   +V   +GK+ G  +  + CGST   A+              GR       + ++PT
Sbjct: 280 EEPTLVRGLSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGNYGRLGHGSSEDQLTPT 339

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
            +  L G  +  +  G      +AV  +G  ++WG  + G+LG G       P I+  L 
Sbjct: 340 LVVSLKGRRVIDICCGSGDAQTLAVTDDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQ 399

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
              I +   G   ++ +T+ G+   +G     +LG G+  +   P  +  L   +V   A
Sbjct: 400 GQDIVRVCCGAQFSLALTKTGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGLRGKKVVDVA 459

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
            G+   + ++  E   +   G    GQLG   D+ ++TK                +  L 
Sbjct: 460 VGSMHCLVMT--EEGEVYGWGRNDQGQLG---DSSFSTKSDPT------------LMPLD 502

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           G++I  +ACG   +    S G+   W  G
Sbjct: 503 GKSISGIACGPAQSFCWTSTGH---WSVG 528


>gi|224120790|ref|XP_002330952.1| predicted protein [Populus trichocarpa]
 gi|222873146|gb|EEF10277.1| predicted protein [Populus trichocarpa]
          Length = 462

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 120/415 (28%), Positives = 172/415 (41%), Gaps = 75/415 (18%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  DG L  P +L P +     G + R++   C   H  AV  +G  +TWG NE GQL
Sbjct: 35  RKGK-DGQLRIPKQLPPELFGCPAGANARWLDIACGREHTAAVASDGSLFTWGANEFGQL 93

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGNSLAFGWNKHGQLGSGS 146
           G G +  R  P  V +L    +K    G   T  + E    DG  L+  W      GS  
Sbjct: 94  GDGTEDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSRLWVWGQNQGSNY 153

Query: 147 IR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE- 202
            R       P+ + C VS      CGA   V LS  E   +   G  +YGQLG G   E 
Sbjct: 154 PRLFCGAFSPNTIICQVS------CGAVHVVALS--EDGLLQAWGYNEYGQLGRGFTCEG 205

Query: 203 ---YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                  ++  K   EA   P  +       I +V+CG  HT A+  KG VYTWG G  G
Sbjct: 206 LQGARVINAYAKFLDEA---PELV------KITQVSCGEYHTAAISEKGEVYTWGLGNMG 256

Query: 260 RLGHREQKD---EWVPRRV----DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK- 311
           +LGH   +    E +PRRV     +F ++        ++ G V++      G LY WG  
Sbjct: 257 QLGHTSLQSGDKELLPRRVVALDGIFIKD--------VACGGVHTCAATQKGALYAWGGG 308

Query: 312 ----------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISW 354
                           + +  + ++   P + +   +++ +  G+ H  V   D     W
Sbjct: 309 QAGQLGLGPQTGSFSFIPSESESFLRNIPALVVPT-DVQHVACGHSHTLVSMRDGRIHGW 367

Query: 355 GHAQYGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           G+  YG+       +KS+    P  VD   G  V  +A G GHS V+ D  ++ E
Sbjct: 368 GYNSYGQAA----NEKSTYAWYPSPVDWCVG-EVRKLAAGGGHSAVLTDACSLKE 417



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 71/178 (39%), Gaps = 48/178 (26%)

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVN 296
           T  +V   +K  +Y WG+   G+ G + +  +  +P++         LPPE         
Sbjct: 10  TKRSVNFPTKSAIYVWGYNQSGQTGRKGKDGQLRIPKQ---------LPPELF------- 53

Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
             C AG    ++                       ++ C   G  H   V +D S  +WG
Sbjct: 54  -GCPAGANARWL-----------------------DIAC---GREHTAAVASDGSLFTWG 86

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD-RTNVGERLDQV 412
             ++G+LG G   + S   PKKV  LE   V SV+CG   +  I + R N G  L ++
Sbjct: 87  ANEFGQLGDGT--EDSRKYPKKVKQLETEFVKSVSCGAHCTAAIAEPRQNDGTILSRL 142


>gi|159038541|ref|YP_001537794.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157917376|gb|ABV98803.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 561

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 146/333 (43%), Gaps = 28/333 (8%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
            G    WG N   QLG G    R  P  V   +   I    AG+ H++ VT  G  LA+G
Sbjct: 59  PGTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTITAVAAGQGHSLAVTSAGTVLAWG 118

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            N  GQLG G+      P  V     + VTA A G   ++ ++S    ++L  GL   GQ
Sbjct: 119 ANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTST--GTVLAWGLNVTGQ 176

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           L  GT     T +SS  +  +           AG T+  VA G  H++A+ S G V  WG
Sbjct: 177 LYDGT----TTTNSSTPIVVDLP---------AGTTVTAVAAGNAHSLALTSAGTVLAWG 223

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--L 312
               G+LG         P  VD+     +    A  S+ S+  + T   G +  WG    
Sbjct: 224 ANSSGQLGDGTTTPRSTPVAVDLPAGTTISTIAASSSSHSLAVTST---GTMLAWGANFT 280

Query: 313 KNNGDDWMYPK--PL-MDL-SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
              GD  +  +  P+ +DL +G  +  + +G+ H   V +  + ++WG    G+LG G  
Sbjct: 281 GQLGDGTITNRSTPVAVDLPAGTTVTAVATGSGHSLAVTSTGTMLAWGGNGSGQLGDG-- 338

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              SS+ P  VD+  G  V +VA G GHSL + 
Sbjct: 339 STTSSSTPVAVDLPAGTTVTAVAGGAGHSLALT 371



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 139/351 (39%), Gaps = 30/351 (8%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           I  VAAG    H +AV   G    WG N  GQLG G    R  P  V   +   +    A
Sbjct: 95  ITAVAAG--QGHSLAVTSAGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAA 152

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G  H++ VT  G  LA+G N  GQL  G+         V  L +  T TA  A     L+
Sbjct: 153 GDRHSLAVTSTGTVLAWGLNVTGQLYDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLA 212

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVAC 236
                ++L  G    GQLG GT    +T              P A+   AG       A 
Sbjct: 213 LTSAGTVLAWGANSSGQLGDGTTTPRST--------------PVAVDLPAGTTISTIAAS 258

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
            ++H++AV S G +  WG    G+LG     +   P  VD+     V      ++ GS +
Sbjct: 259 SSSHSLAVTSTGTMLAWGANFTGQLGDGTITNRSTPVAVDLPAGTTV----TAVATGSGH 314

Query: 297 SSCTAGGGQLYMWGKLKN----NGDDWMYPKPL-MDLSGWNLRCMDSGNMHHFVGADS-- 349
           S      G +  WG   +    +G       P+ +DL         +G   H +   S  
Sbjct: 315 SLAVTSTGTMLAWGGNGSGQLGDGSTTSSSTPVAVDLPAGTTVTAVAGGAGHSLALTSTG 374

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + ++WG    G+LG G    +S+  P   D+     + ++A G  HSL +V
Sbjct: 375 TMLAWGFNTSGQLGDGTTSNRST--PIATDLPADTTITAIAGGSFHSLAVV 423



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 12/165 (7%)

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A    G    WG     +LG     +   P  VD+     +      ++AG  +S     
Sbjct: 55  AAGPPGTGLAWGDNAESQLGDGTTTNRSTPVTVDLPADTTI----TAVAAGQGHSLAVTS 110

Query: 303 GGQLYMWGKLKNN--GDDWMYPK--PL-MDL-SGWNLRCMDSGNMHHF-VGADSSCISWG 355
            G +  WG   +   GD    P+  P+ +DL +G  +  + +G+ H   V +  + ++WG
Sbjct: 111 AGTVLAWGANSSGQLGDGTTTPRSTPVAVDLPAGTTVTAVAAGDRHSLAVTSTGTVLAWG 170

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               G+L Y      +S+ P  VD+  G  V +VA G  HSL + 
Sbjct: 171 LNVTGQL-YDGTTTTNSSTPIVVDLPAGTTVTAVAAGNAHSLALT 214


>gi|145594878|ref|YP_001159175.1| cell wall anchor domain-containing protein [Salinispora tropica
           CNB-440]
 gi|145304215|gb|ABP54797.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
          Length = 551

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 106/367 (28%), Positives = 151/367 (41%), Gaps = 40/367 (10%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  +R  VG  +  +A      H +A+   G    WG N  GQLG G       P  V 
Sbjct: 78  TPVPVRLPVGTTVTAIAGS--DTHSLALTSVGTVLAWGGNSFGQLGDGTTASSRTPVPVR 135

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
                 +    AG SH++ +T  G   A+G N  GQLG G+  +   P PVR  V + VT
Sbjct: 136 LPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVGTTVT 195

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G   ++ ++S    + L  G   +GQLG GT     T  SS  +     P      
Sbjct: 196 AIAGGLGHSLAVAST--GATLAWGSNAFGQLGDGT-----TTGSSTPITVPQLP------ 242

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
                T+  VA G  H++A+ S G VY WG   +G+LG     D   P  V V       
Sbjct: 243 -----TVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDGSTSDSSTPIAVRVPAGTTA- 296

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM---------YPKPLMDLSGWNLRC 335
              AV+S G+ +S      G    WG   +NG   +          P  +    G  L  
Sbjct: 297 --TAVVS-GADHSLALTAAGGALAWG---DNGQGQLGNGATVGSSTPVAVRVPGGATLTA 350

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           +     H   V + ++ ++W     G+LG G      S+ P  V +  G  + +VA G  
Sbjct: 351 VAIHRDHAVAVTSTATALAWSRNNEGQLGNG--TTTDSSEPVAVSLPAGTAITAVAVGDD 408

Query: 395 HSLVIVD 401
           HSL +VD
Sbjct: 409 HSLALVD 415



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 136/327 (41%), Gaps = 32/327 (9%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG N  GQ G+G       P  V       +       +H++ +T  G  LA+G N  GQ
Sbjct: 60  WGDNSFGQFGNGTTASSRTPVPVRLPVGTTVTAIAGSDTHSLALTSVGTVLAWGGNSFGQ 119

Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG G+  +   P PVR  V + VTA A G   ++ +++    ++   G    GQLG GT 
Sbjct: 120 LGDGTTASSRTPVPVRLPVGTTVTAIAAGTSHSLAITAT--GAVFAWGDNAVGQLGDGT- 176

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
               T DSS+         P  +    G T+  +A G  H++AV S G    WG   +G+
Sbjct: 177 ----TTDSSL---------PVPVRLPVGTTVTAIAGGLGHSLAVASTGATLAWGSNAFGQ 223

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD- 317
           LG         P  + V Q    LP    ++AG V+S      G +Y WG       GD 
Sbjct: 224 LGDGTTTGSSTP--ITVPQ----LPTVTAVAAGDVHSLALTSTGTVYAWGANSFGQLGDG 277

Query: 318 ---DWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSA 373
              D   P  +   +G     + SG  H   + A    ++WG    G+LG G      S+
Sbjct: 278 STSDSSTPIAVRVPAGTTATAVVSGADHSLALTAAGGALAWGDNGQGQLGNG--ATVGSS 335

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIV 400
            P  V +  G  + +VA    H++ + 
Sbjct: 336 TPVAVRVPGGATLTAVAIHRDHAVAVT 362



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 125/300 (41%), Gaps = 29/300 (9%)

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
           +V+      +  AGA R+ T  V  D   LA+G N  GQ G+G+  +   P PVR  V +
Sbjct: 30  VVTVTQAAGVLPAGAQRTPTAAVATD-TILAWGDNSFGQFGNGTTASSRTPVPVRLPVGT 88

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            VTA A     ++ L+SV   ++L  G   +GQLG GT     T              P 
Sbjct: 89  TVTAIAGSDTHSLALTSV--GTVLAWGGNSFGQLGDGTTASSRT--------------PV 132

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +    G T+  +A GT+H++A+ + G V+ WG    G+LG     D  +P  V +    
Sbjct: 133 PVRLPVGTTVTAIAAGTSHSLAITATGAVFAWGDNAVGQLGDGTTTDSSLPVPVRLPVGT 192

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMD 337
            V      I+ G  +S   A  G    WG        +G       P+       +  + 
Sbjct: 193 TV----TAIAGGLGHSLAVASTGATLAWGSNAFGQLGDGTTTGSSTPITVPQLPTVTAVA 248

Query: 338 SGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +G++H      +  + +WG   +G+LG G      S+ P  V +  G    +V  G  HS
Sbjct: 249 AGDVHSLALTSTGTVYAWGANSFGQLGDG--STSDSSTPIAVRVPAGTTATAVVSGADHS 306



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG N +GQLG+G  +    P  V       +      R H V VT    +LA+  N  GQ
Sbjct: 318 WGDNGQGQLGNGATVGSSTPVAVRVPGGATLTAVAIHRDHAVAVTSTATALAWSRNNEGQ 377

Query: 142 LGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGAS 183
           LG+G+  +  EP  V     + +TA A G D ++ L   +  S
Sbjct: 378 LGNGTTTDSSEPVAVSLPAGTAITAVAVGDDHSLALVDAQATS 420


>gi|302783358|ref|XP_002973452.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
 gi|300159205|gb|EFJ25826.1| hypothetical protein SELMODRAFT_99040 [Selaginella moellendorffii]
          Length = 437

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 154/381 (40%), Gaps = 56/381 (14%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            +R +A  C   H  A+  +G  +TWG N+ GQLG G +   DRP  V  L    +K   
Sbjct: 45  SLRLIAISCGLEHTAAIASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVA 104

Query: 117 AGRSHTVVVTE--DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
            G + T  + +  DG      W      GS S R          +V +V   ACG     
Sbjct: 105 CGANCTAAIADSRDGTCRGRMWIWGQNQGSNSPRLFSGAFSSSTVVIQV---ACGGAHAA 161

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNE----YNTKDSSVKLAYEAQPRPRAIAALAGET 230
            LS  E   +   G  ++GQLG G   E         S VK   E     +         
Sbjct: 162 ALS--EHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVK--------- 210

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD---EWVPRRVDVFQRNNVLPPE 287
           + +V CG  HT A+   G VYTWG G  G+LGHR  +    E +PRRV   +  +V+   
Sbjct: 211 VKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVLPRRVVTLEGVDVVQ-- 268

Query: 288 AVISAGSVNSSCTAGGGQLYMWG--------------KLKNNGD-DWMYPKPLMDLSGWN 332
             ISAG V+S   +  G LYMWG              ++  + D D+ + +  + +    
Sbjct: 269 --ISAGGVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGSSDIDFFFQRIPVLVIPSG 326

Query: 333 LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------MPKKVDILEGMHV 386
            R    G++H  V          + +    GY  YGQ  S        P  +D   G  +
Sbjct: 327 ARSATCGDLHTLV-------RMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVG-EI 378

Query: 387 ISVACGYGHSLVIVDRTNVGE 407
             +A G GHS V+   +N+ E
Sbjct: 379 TCLAAGGGHSAVLTQASNLKE 399



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 15/144 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V P R+  L GVD+  ++AG V  H  A+   G  Y WG +  GQLG G +  +DR    
Sbjct: 253 VLPRRVVTLEGVDVVQISAGGV--HSCAISSAGGLYMWGGSHAGQLGLGPR--QDRICGS 308

Query: 105 SELSKY-----------KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
           S++  +             + A  G  HT+V   +G  L  G+N +GQ  SG       P
Sbjct: 309 SDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANGRLLGCGYNSYGQADSGKAYYAWYP 368

Query: 154 SPVRCLVSEVTATACGADFTVWLS 177
           SP+   V E+T  A G   +  L+
Sbjct: 369 SPIDWCVGEITCLAAGGGHSAVLT 392


>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
          Length = 1031

 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 19/209 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
           DI+ V   C   H +A+  E   Y+WG+N+ GQLG G +I+++  P  +  L+       
Sbjct: 120 DIQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLAGIPFAHI 179

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG  H+  +T  G    +G NK GQLG     +   P+ ++ L S+ +    CG D T 
Sbjct: 180 AAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHTA 239

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+   G     AG   YGQLGH + N               +  PR +  L G  + ++
Sbjct: 240 ALTKEGGVFTFGAG--GYGQLGHNSTNH--------------EVNPRKVFELMGSIVTQI 283

Query: 235 ACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
           ACG  HT+A V S G +Y++G GG G+LG
Sbjct: 284 ACGRQHTLAFVPSSGRIYSFGLGGNGQLG 312



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 154/345 (44%), Gaps = 35/345 (10%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           ++ P R    +  ++R V  GC S H V V  +G  YT G N+ GQLGH DK  R +P  
Sbjct: 6   VLEPRRCDFFINKNVRDV--GCGSRHTVFVLDDGTVYTCGCNDLGQLGH-DK-SRKKPDQ 61

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
           V  L    I     G +HT+ + + G   ++G   HGQ+G     + I  P  ++ L   
Sbjct: 62  VGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGLSVAEDYIRVPRNIKSLYDI 121

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           ++   ACG   ++ LS  + + I + G  QYGQLG G++ +   K+S+          PR
Sbjct: 122 QIVQVACGHHHSLALS--KESDIYSWGQNQYGQLGLGSEIK---KESA----------PR 166

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I +LAG     +A G  H+ A+   G ++ WG   +G+LG  ++ D   P  +   +  
Sbjct: 167 HIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQ 226

Query: 282 NVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
            ++          A+   G V +    G GQL       N+ +  + P+ + +L G  + 
Sbjct: 227 KIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTNHEVNPRKVFELMGSIVT 281

Query: 335 CMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 282 QIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 326



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 137/298 (45%), Gaps = 32/298 (10%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGA 170
           ++  G G  HTV V +DG     G N  GQLG    R +  P  V  L ++ + A +CG 
Sbjct: 20  VRDVGCGSRHTVFVLDDGTVYTCGCNDLGQLGHDKSRKK--PDQVGALDAQTIVAVSCGE 77

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T+ L+  +   + + G   +GQ+G     +Y      +++       PR I +L    
Sbjct: 78  AHTLALN--DKGQVFSWGHAAHGQIGLSVAEDY------IRV-------PRNIKSLYDIQ 122

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAV 289
           IV+VACG +H++A+  +  +Y+WG   YG+LG   E K E  PR +    ++    P A 
Sbjct: 123 IVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHI----KSLAGIPFAH 178

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           I+AG  +S      G ++ WG+ K      N+  D   P  L  L    +  +  G  H 
Sbjct: 179 IAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQKIIHICCGEDHT 238

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +  +    ++G   YG+LG+     + +  P+KV  L G  V  +ACG  H+L  V
Sbjct: 239 AALTKEGGVFTFGAGGYGQLGHNSTNHEVN--PRKVFELMGSIVTQIACGRQHTLAFV 294



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 114/262 (43%), Gaps = 36/262 (13%)

Query: 147 IRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
           I  E+   P RC   +   V    CG+  TV++  ++  ++   G    GQLGH      
Sbjct: 1   IDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFV--LDDGTVYTCGCNDLGQLGH------ 52

Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
              D S K       +P  + AL  +TIV V+CG  HT+A++ KG V++WG   +G++G 
Sbjct: 53  ---DKSRK-------KPDQVGALDAQTIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGL 102

Query: 264 REQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNN 315
              +D   VPR +       ++     ++ G  +S   +    +Y WG+       L + 
Sbjct: 103 SVAEDYIRVPRNIKSLYDIQIVQ----VACGHHHSLALSKESDIYSWGQNQYGQLGLGSE 158

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAM 374
                 P+ +  L+G     + +G  H F    S  I  WG  ++G+LG      +S+  
Sbjct: 159 IKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGLNDETDRSA-- 216

Query: 375 PKKVDILEGMHVISVACGYGHS 396
           P  +  L    +I + CG  H+
Sbjct: 217 PALLKSLRSQKIIHICCGEDHT 238


>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
 gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
          Length = 514

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 125/265 (47%), Gaps = 20/265 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L+ V +  VA      H +A+  EG+ Y+WG  +RGQLGHG+ +    PT++ E
Sbjct: 200 PRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWGCGDRGQLGHGNTLGYLDPTLIDE 259

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L   ++ K   G  H++ V  DG   ++G   +G LG G+   ++ P  +  L  + + A
Sbjct: 260 LKSKEVTKIACGAMHSIAVLSDGKIFSWGDGSNGALGHGNNLAQLLPKKIMSLNGKHIMA 319

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG  +T+   +V G  + + GL   G+LG+G +               +   P  I A
Sbjct: 320 VACGECYTI---AVAGDDVWSWGLGGNGELGYGVE-------------MPSYYMPTKIEA 363

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L  + I  VACG   + AV + G V+ WG G   RLG   +K    PR +    +   + 
Sbjct: 364 LFFKGITNVACGYATSFAVSANGKVWAWGSGDRFRLGLGNEKVIVKPREIQGDLKGKKI- 422

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
               + A   ++      GQ+Y+WG
Sbjct: 423 --KRVVASLFHALAIDENGQVYIWG 445



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 118/272 (43%), Gaps = 30/272 (11%)

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           +K   L +   +N +EP   + L + + +  ACG D ++++ S  G  I   G    G L
Sbjct: 132 SKRNLLLAADEKNPLEPDKSKLLENLDPSDIACGYD-SLFVVSRNGG-IFACGKGHMGCL 189

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC--GTNHTVAVDSKGYVYTW 253
           G G  ++ N               PR I  L    +  VA   G  H +A+ ++G VY+W
Sbjct: 190 GLGNCDDVNV--------------PRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSW 235

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G G  G+LGH        P  +D  +   V      I+ G+++S      G+++ WG   
Sbjct: 236 GCGDRGQLGHGNTLGYLDPTLIDELKSKEV----TKIACGAMHSIAVLSDGKIFSWGDGS 291

Query: 314 N------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPY 367
           N      N    + PK +M L+G ++  +  G  +    A     SWG    GELGYG  
Sbjct: 292 NGALGHGNNLAQLLPKKIMSLNGKHIMAVACGECYTIAVAGDDVWSWGLGGNGELGYG-V 350

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              S  MP K++ L    + +VACGY  S  +
Sbjct: 351 EMPSYYMPTKIEALFFKGITNVACGYATSFAV 382


>gi|156546048|ref|XP_001600404.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Nasonia
           vitripennis]
          Length = 533

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 21/271 (7%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P ++  L G  I+  A G    H +A+  +G  Y+WG N   +LG+G   Q   PT+ 
Sbjct: 65  LHPKKVEALCGKGIKTFAYGS-GPHVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLC 123

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
             L++  +     G  H+V +TEDG   ++G N  GQ+ SG   N+  P  V   ++   
Sbjct: 124 LNLNEKVVTAIACGSHHSVALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKVNSALTGKV 183

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V + ACG   ++ ++ V    +   G    GQLG G               Y  Q  P  
Sbjct: 184 VVSIACGQTSSMAVTDV--GEVFGWGYNGVGQLGIGN--------------YVNQLSPCK 227

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L G  I KVACG  HT+A+  +G +Y WG  G+G+LG   + +   P +++V +   
Sbjct: 228 VTGLNGIVIEKVACGYAHTLALSDEGALYVWGGNGFGQLGLGNKANACTPIKLNVTEMGR 287

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +    A +    + S     GG++YMWG+ +
Sbjct: 288 I-SDIATLHYNHI-SVAMGQGGKIYMWGQCR 316



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 113/253 (44%), Gaps = 23/253 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR- 119
           V  G +    + V  +G  Y  G N  G LG GD      P  V  L    IK    G  
Sbjct: 27  VVYGNLGNEALIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSG 86

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
            H + +T  G   ++G N + +LG+GS    + P+    L  + VTA ACG+  +V L+ 
Sbjct: 87  PHVLALTNKGEIYSWGHNGYCELGNGSTNQGLTPTLCLNLNEKVVTAIACGSHHSVALT- 145

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACG 237
            E   + + G    GQ+  G  +               Q  PR + +AL G+ +V +ACG
Sbjct: 146 -EDGEVYSWGQNNCGQVSSGISSN--------------QGAPRKVNSALTGKVVVSIACG 190

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
              ++AV   G V+ WG+ G G+LG     ++  P +V     N ++  +  ++ G  ++
Sbjct: 191 QTSSMAVTDVGEVFGWGYNGVGQLGIGNYVNQLSPCKVTGL--NGIVIEK--VACGYAHT 246

Query: 298 SCTAGGGQLYMWG 310
              +  G LY+WG
Sbjct: 247 LALSDEGALYVWG 259



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 109/280 (38%), Gaps = 64/280 (22%)

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
           ++VT+DG+  A G N  G LG+G   + + P  V  L  +   T         L+     
Sbjct: 37  LIVTKDGDVYALGSNTAGCLGTGDSHSTLHPKKVEALCGKGIKTFAYGSGPHVLALTNKG 96

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            I + G   Y +LG+G+ N+  T              P     L  + +  +ACG++H+V
Sbjct: 97  EIYSWGHNGYCELGNGSTNQGLT--------------PTLCLNLNEKVVTAIACGSHHSV 142

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+   G VY+WG    G++      ++  PR+V     N+ L  + V+S     +S  A 
Sbjct: 143 ALTEDGEVYSWGQNNCGQVSSGISSNQGAPRKV-----NSALTGKVVVSIACGQTSSMA- 196

Query: 303 GGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGEL 362
                                             D G +            WG+   G+L
Sbjct: 197 --------------------------------VTDVGEV----------FGWGYNGVGQL 214

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           G G Y  + S  P KV  L G+ +  VACGY H+L + D 
Sbjct: 215 GIGNYVNQLS--PCKVTGLNGIVIEKVACGYAHTLALSDE 252


>gi|408501033|ref|YP_006864952.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465857|gb|AFU71386.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1190

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 100/349 (28%), Positives = 147/349 (42%), Gaps = 50/349 (14%)

Query: 49   RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL- 107
            +  P +  D  +V     S H +AV  +G  Y WGRN+ G+LG G    +  P  V +  
Sbjct: 726  KTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQHTPVRVKKPA 785

Query: 108  ---SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
               + +   +  AG  H++ +  DGN+ A+G+N  GQLG G+  +    + VR      T
Sbjct: 786  GTSTDFTYVQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTDRA--TSVRVKKPAGT 843

Query: 165  ATACGADFTV------WLSSVEGASILNA---GLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
            +T    DFT          S+   S  NA   GL  +GQLG GT  +  T    VK+   
Sbjct: 844  ST----DFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRATP---VKVGTP 896

Query: 216  AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            A             T  ++  G  H++AV S GY Y WG+   G+LG+  +   + P   
Sbjct: 897  A-------GTPTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPN 949

Query: 276  DVFQRNNVLPPEA-------VISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYP 322
             V  RN   P +A        ++AG  +S      G  Y W     G+L NN   D   P
Sbjct: 950  PVRVRNPASPNDADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVP 1009

Query: 323  -------KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
                    P     G     + +G  H   +G+D +  +WG   YG+LG
Sbjct: 1010 VLVSDSASPTDTSKGLKAVLVSTGQYHSLALGSDGNAYAWGDNGYGQLG 1058



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 161/394 (40%), Gaps = 70/394 (17%)

Query: 58   IRFV---AAGCVSC----HCVAVDVEGRCYTWGRNERGQLGHGDKI-----------QRD 99
            IRF    A+  VS       +AV  +G  Y WG N++G+LG G              Q D
Sbjct: 665  IRFSQVSASSFVSVTDFGFSLAVGSDGNAYAWGGNKKGELGDGTTSENARSTPVMVKQPD 724

Query: 100  RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            R T     + +   +  AG  H++ V  DGN+ A+G N  G+LG G+  ++   +PVR  
Sbjct: 725  RKTYPDLPADFTYVQVSAGSQHSLAVGSDGNAYAWGRNDDGRLGDGTSTDQH--TPVRVK 782

Query: 160  VSEVTATACGADFTV------WLSSVEGASILNA---GLPQYGQLGHGTDNEYNTKDSSV 210
                T+T    DFT       +  S+   S  NA   G    GQLG GT  +   + +SV
Sbjct: 783  KPAGTST----DFTYVQVSAGYHHSLALGSDGNAYAWGYNNSGQLGDGTSTD---RATSV 835

Query: 211  KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
            ++   A             T V+V+ G  H++A+ S G  Y WG   +G+LG     D  
Sbjct: 836  RVKKPA-------GTSTDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRA 888

Query: 271  VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY---P 322
             P +V            A I AG ++S      G  Y W     G+L NN     +   P
Sbjct: 889  TPVKVGTPAGTPTDFTYAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNP 948

Query: 323  KPLMDLS---------GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS 372
             P+   +         G     + +G  H   +G+D +  +WG    G+LG      K S
Sbjct: 949  NPVRVRNPASPNDADKGLKAVNVTAGFWHSLALGSDGNAYAWGFNSNGQLGNN--SSKDS 1006

Query: 373  AMP-------KKVDILEGMHVISVACGYGHSLVI 399
             +P          D  +G+  + V+ G  HSL +
Sbjct: 1007 TVPVLVSDSASPTDTSKGLKAVLVSTGQYHSLAL 1040



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 98/225 (43%), Gaps = 23/225 (10%)

Query: 56   VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP----TIVSELSKYK 111
             D  +V     + H +A+  +G  Y WG N  GQLG G    R  P    T     + + 
Sbjct: 845  TDFTYVQVSAGAFHSLALGSDGNAYAWGLNNFGQLGDGTSTDRATPVKVGTPAGTPTDFT 904

Query: 112  IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP----VRCLVSEVTA-- 165
              + GAG  H++ V  DG + A+G+N  GQLG+ S      P+P    VR   S   A  
Sbjct: 905  YAQIGAGYLHSLAVGSDGYAYAWGYNFSGQLGNNSKGGFFSPNPNPVRVRNPASPNDADK 964

Query: 166  --TACGADFTVWLSSVEGASILNA---GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
               A       W S   G S  NA   G    GQLG+ +     +KDS+V +       P
Sbjct: 965  GLKAVNVTAGFWHSLALG-SDGNAYAWGFNSNGQLGNNS-----SKDSTVPVLVSDSASP 1018

Query: 221  RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
               +   G   V V+ G  H++A+ S G  Y WG  GYG+LG+  
Sbjct: 1019 TDTSK--GLKAVLVSTGQYHSLALGSDGNAYAWGDNGYGQLGNNS 1061



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 11/103 (10%)

Query: 69   HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG-------AGRSH 121
            H +A+  +G  Y WG N  GQLG+        P +VS+ +       G        G+ H
Sbjct: 977  HSLALGSDGNAYAWGFNSNGQLGNNSSKDSTVPVLVSDSASPTDTSKGLKAVLVSTGQYH 1036

Query: 122  TVVVTEDGNSLAFGWNKHGQLGSGSI----RNEIEPSPVRCLV 160
            ++ +  DGN+ A+G N +GQLG+ SI     N    SPV   V
Sbjct: 1037 SLALGSDGNAYAWGDNGYGQLGNNSIPTGSNNNEARSPVPVPV 1079


>gi|337751269|ref|YP_004645431.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
 gi|336302458|gb|AEI45561.1| hypothetical protein KNP414_07049 [Paenibacillus mucilaginosus
           KNP414]
          Length = 404

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 127/268 (47%), Gaps = 18/268 (6%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N+  P ++  L   DI  V+ G V  H +A+D  G  ++WG N  GQLG+G       PT
Sbjct: 122 NIARPVQINGLK--DIVQVSTGLV--HSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPT 177

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V  LS     +AGA   H++ ++ DG   A+G N+ GQLG+G       P  V+ L   
Sbjct: 178 KVEFLSNIVAIEAGA--EHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNL-EN 234

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +   A G + ++ L      +I   G    GQ+G G+ N Y  KD  ++     +  P  
Sbjct: 235 IEMIAGGDNHSLALD--HDGAIWAWGYNSNGQIGDGSSNVYE-KDGQLR-EKRNKTEPVK 290

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L G+ + +V+ G  H+ A+   G VY WG+  YG+LG+   KD  VP       RNN
Sbjct: 291 LNGLYGK-VKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKDSKVPL------RNN 343

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           V      I  GS +S      G +Y WG
Sbjct: 344 VGRSIIDIETGSYHSFAVDESGVIYAWG 371



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 44/327 (13%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+   G  + WG N +G++  G K    RP  ++ L    I +   G  H++ + + 
Sbjct: 95  HTLAITKHGTVWGWGYNSKGEITEGGK-NIARPVQINGLKD--IVQVSTGLVHSLALDQS 151

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   ++G N +GQLG+G+ ++   P+ V  L S + A   GA+ ++ LS+     +   G
Sbjct: 152 GAVWSWGENIYGQLGNGTNQDSSIPTKVEFL-SNIVAIEAGAEHSLALSN--DGKVWAWG 208

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             ++GQLG+G   + N               PR +  L  E I  +A G NH++A+D  G
Sbjct: 209 RNEFGQLGNGETEKSNI--------------PRLVKNL--ENIEMIAGGDNHSLALDHDG 252

Query: 249 YVYTWGFGGYGRLGH------------REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
            ++ WG+   G++G             RE++++  P ++     N +      +SAG  +
Sbjct: 253 AIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKL-----NGLYGKVKQVSAGIKH 307

Query: 297 SSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
           S+     G++Y WG  +     NG       PL +  G ++  +++G+ H F   +S  I
Sbjct: 308 STALTENGEVYAWGWNEYGQLGNGSMKDSKVPLRNNVGRSIIDIETGSYHSFAVDESGVI 367

Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKV 378
            +WG A YG+LG G +G+  + +   V
Sbjct: 368 YAWGDATYGQLGDGTFGKDGNRITYMV 394



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 36/228 (15%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT++  L  +    VA    + H +A+  +G+ + WGRNE GQLG+G+  + + P +V  
Sbjct: 176 PTKVEFLSNI----VAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKN 231

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI------------RNEIEPS 154
           L    I+    G +H++ +  DG   A+G+N +GQ+G GS             RN+ EP 
Sbjct: 232 LEN--IEMIAGGDNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPV 289

Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            +  L  +V   + G   +  L+  E   +   G  +YGQLG+G+      KDS V L  
Sbjct: 290 KLNGLYGKVKQVSAGIKHSTALT--ENGEVYAWGWNEYGQLGNGS-----MKDSKVPLRN 342

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                        G +I+ +  G+ H+ AVD  G +Y WG   YG+LG
Sbjct: 343 NV-----------GRSIIDIETGSYHSFAVDESGVIYAWGDATYGQLG 379



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 20/156 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG------------DKIQRDRPTIV 104
           +I  +A G    H +A+D +G  + WG N  GQ+G G            +K  +  P  +
Sbjct: 234 NIEMIAGG--DNHSLALDHDGAIWAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKL 291

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
           + L   K+K+  AG  H+  +TE+G   A+GWN++GQLG+GS+++     P+R  V   +
Sbjct: 292 NGLYG-KVKQVSAGIKHSTALTENGEVYAWGWNEYGQLGNGSMKD--SKVPLRNNVGRSI 348

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
                G+  +   +  E   I   G   YGQLG GT
Sbjct: 349 IDIETGSYHS--FAVDESGVIYAWGDATYGQLGDGT 382



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 42/304 (13%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AG   + ++  DG     G N  GQLG+G+ ++      V  L  +V +     D T  L
Sbjct: 41  AGGYVSTILRSDGTVWTTGRNNVGQLGNGTEKDSSYFGKVDELY-DVVSLDSDMDHT--L 97

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +  +  ++   G    G++  G  N                 RP  I  L  + IV+V+ 
Sbjct: 98  AITKHGTVWGWGYNSKGEITEGGKN---------------IARPVQINGL--KDIVQVST 140

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G  H++A+D  G V++WG   YG+LG+   +D  +P +V+       L     I AG+ +
Sbjct: 141 GLVHSLALDQSGAVWSWGENIYGQLGNGTNQDSSIPTKVE------FLSNIVAIEAGAEH 194

Query: 297 SSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSC 351
           S   +  G+++ WG+ +     NG+      P +  +  N+  +  G+ H   +  D + 
Sbjct: 195 SLALSNDGKVWAWGRNEFGQLGNGETEKSNIPRLVKNLENIEMIAGGDNHSLALDHDGAI 254

Query: 352 ISWGHAQYGELG------YGPYGQ----KSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            +WG+   G++G      Y   GQ    ++   P K++ L G  V  V+ G  HS  + +
Sbjct: 255 WAWGYNSNGQIGDGSSNVYEKDGQLREKRNKTEPVKLNGLYG-KVKQVSAGIKHSTALTE 313

Query: 402 RTNV 405
              V
Sbjct: 314 NGEV 317



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 107/263 (40%), Gaps = 54/263 (20%)

Query: 148 RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           +N    S V        +T   +D TVW +          G    GQLG+GT+     KD
Sbjct: 29  KNSESTSVVSINAGGYVSTILRSDGTVWTT----------GRNNVGQLGNGTE-----KD 73

Query: 208 SS----VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
           SS    V   Y+               +V +    +HT+A+   G V+ WG+   G +  
Sbjct: 74  SSYFGKVDELYD---------------VVSLDSDMDHTLAITKHGTVWGWGYNSKGEITE 118

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGD 317
             +    + R V +    N L     +S G V+S      G ++ W     G+L N    
Sbjct: 119 GGKN---IARPVQI----NGLKDIVQVSTGLVHSLALDQSGAVWSWGENIYGQLGNGTNQ 171

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
           D   P  +  LS  N+  +++G  H   +  D    +WG  ++G+LG G    + S +P+
Sbjct: 172 DSSIPTKVEFLS--NIVAIEAGAEHSLALSNDGKVWAWGRNEFGQLGNGE--TEKSNIPR 227

Query: 377 KVDILEGMHVISVACGYGHSLVI 399
            V  LE + +I  A G  HSL +
Sbjct: 228 LVKNLENIEMI--AGGDNHSLAL 248


>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           impatiens]
          Length = 539

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 24/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P ++  L G  ++  A G    H +A+  EG+ Y+WG N+  +LG+    +   PT+V
Sbjct: 68  IYPKKIEALCGKSVKTFAYG-KGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLV 126

Query: 105 -SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--- 160
            S L    +     G  H++ +T  G   A+G N  GQ+G G+I + ++P P    V   
Sbjct: 127 PSVLDDKFVVDIACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLN 186

Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   +CG   +V ++  +   + + G    GQLG G                 +Q  
Sbjct: 187 GKKVVHISCGDSSSVAVT--DSGEVYSWGHNGVGQLGLGNCT--------------SQVE 230

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +A  A   I KV CG  HT+A+  +G +Y WG   YG+LG     + W+P +++V +
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGVLYVWGANSYGQLGLNTDSNVWIPTKLEVPE 290

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              +L  + V S     S   + G +++MWG+
Sbjct: 291 MGRIL--DIVTSHYHHISLAMSEGNRIFMWGQ 320



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 66/293 (22%), Positives = 123/293 (41%), Gaps = 31/293 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
           G   + T++VT+D      G N +G LG+G  ++ I P  +  L  +   T         
Sbjct: 33  GKAANETLLVTKDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEALCGKSVKTFAYGKGPHV 92

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKV 234
           L+  E   + + G   Y +LG+ + NE  T              P  + + L  + +V +
Sbjct: 93  LALTEEGKVYSWGYNDYCELGNKSTNEGLT--------------PTLVPSVLDDKFVVDI 138

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKDEWVPRRVDV-FQRNNVLPPEAVIS 291
           ACG +H++A+ +KG +Y WG    G++  G      + +P+ ++V      V+     IS
Sbjct: 139 ACGGHHSLALTNKGEIYAWGHNVSGQVGCGTILSTVQPIPKLLNVGLNGKKVVH----IS 194

Query: 292 AGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
            G  +S      G++Y WG          N    + P+ +   +   +  +  G MH   
Sbjct: 195 CGDSSSVAVTDSGEVYSWGHNGVGQLGLGNCTSQVEPQKVATFAKIVIEKVVCGYMHTLA 254

Query: 346 GADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            +D   +  WG   YG+LG       +  +P K+++ E   ++ +   + H +
Sbjct: 255 LSDEGVLYVWGANSYGQLGLNT--DSNVWIPTKLEVPEMGRILDIVTSHYHHI 305



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 87/199 (43%), Gaps = 26/199 (13%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ I AL G+++   A G   H +A+  +G VY+WG+  Y  LG++   +   P  V   
Sbjct: 70  PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVP-- 127

Query: 279 QRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLS 329
              +VL  + V  I+ G  +S      G++Y WG    +G          + P P +   
Sbjct: 128 ---SVLDDKFVVDIACGGHHSLALTNKGEIYAWGH-NVSGQVGCGTILSTVQPIPKLLNV 183

Query: 330 GWN------LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
           G N      + C DS ++   V       SWGH   G+LG G     S   P+KV     
Sbjct: 184 GLNGKKVVHISCGDSSSVA--VTDSGEVYSWGHNGVGQLGLG--NCTSQVEPQKVATFAK 239

Query: 384 MHVISVACGYGHSLVIVDR 402
           + +  V CGY H+L + D 
Sbjct: 240 IVIEKVVCGYMHTLALSDE 258


>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1080

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 110/236 (46%), Gaps = 21/236 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPT 102
            +P  L  L G+ +  VA G  S H V +  +G+ YTWG+N RGQLG G +       P 
Sbjct: 111 FTPRSLEALSGITVTQVACG--SQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQ 168

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VS 161
            V  LS   + +  AG  H+  ++  G+   +G N  GQLG G   +   P+ V  L + 
Sbjct: 169 CVRSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +    ACG D T  L+     ++   G   YGQLGH +              +     PR
Sbjct: 229 KTVFAACGKDHTAVLTM--DGTVFTFGSGHYGQLGHNS--------------FRNALCPR 272

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            +A L G  + K+ACG  HT+ +     VY++G   +G+LG RE+    VP  V +
Sbjct: 273 LVAELWGAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGPREETHPCVPLPVQL 328



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/156 (37%), Positives = 84/156 (53%), Gaps = 5/156 (3%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            ++ SP  +R L  + +  V+AG    H  A+ V G  + WGRN+ GQLG GD   R+ P
Sbjct: 162 SSISSPQCVRSLSSMPVVQVSAG--GDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETP 219

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV- 160
           T+V  L+  K   A  G+ HT V+T DG    FG   +GQLG  S RN + P  V  L  
Sbjct: 220 TLVHYLNMKKTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSFRNALCPRLVAELWG 279

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           ++VT  ACG   T+ L+  +   + + G  ++GQLG
Sbjct: 280 AKVTKIACGRYHTLVLT--DHMKVYSFGCNEHGQLG 313



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 15/195 (7%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV--PRRVDV 277
           PR++ AL+G T+ +VACG+ HTV +   G VYTWG    G+LG  ++    +  P+ V  
Sbjct: 113 PRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV-- 170

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
             R+    P   +SAG  +S   +  G ++ WG+         +  D   P  +  L+  
Sbjct: 171 --RSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMK 228

Query: 332 NLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
                  G  H  V   D +  ++G   YG+LG+  +  +++  P+ V  L G  V  +A
Sbjct: 229 KTVFAACGKDHTAVLTMDGTVFTFGSGHYGQLGHNSF--RNALCPRLVAELWGAKVTKIA 286

Query: 391 CGYGHSLVIVDRTNV 405
           CG  H+LV+ D   V
Sbjct: 287 CGRYHTLVLTDHMKV 301


>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
 gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
           SB210]
          Length = 448

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 157/335 (46%), Gaps = 41/335 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIVSELSKYKIKKAGAGRSHTVVVT 126
           H   V   G  YT G N  G+LG G +  ++  +P +VS LSKYK+ +   G SHT  + 
Sbjct: 33  HTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAII 92

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEP-----SPVRCLVSEVTATACGADFTVWLSSVEG 181
           + G   ++G +  GQLG  S  +   P     S ++ + + VT  +CG   TV +  ++ 
Sbjct: 93  DSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAV--LKN 150

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             + + G  + GQLG G  N+              Q +P  + +L+   I+KV CG  HT
Sbjct: 151 GQVCSFGSGKKGQLGTGNQNK--------------QYKPFLLNSLS--QIIKVKCGFYHT 194

Query: 242 VAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           + +D  G VY+ G    G+LG    + +   PR V   + + +      I AGS +S+  
Sbjct: 195 LFLDESGRVYSCGLNDEGQLGQGHNEGNISSPRLVLELEHSFI----KKIFAGS-HSAAI 249

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCISWGHA 357
               ++Y +G  K+    ++YP+ L+ +   ++  +  GN  HF   V  D    SWG  
Sbjct: 250 TDANEIYFFG--KSQLGQFLYPQ-LVRICQGDVNEISIGN--HFGVAVTYDGKVYSWGIN 304

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
           Q G+LG G    +   +P  V+ L    VIS  CG
Sbjct: 305 QQGQLGQGDSDVR--IIPSLVEPLNEKKVISATCG 337



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 122/323 (37%), Gaps = 47/323 (14%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G L   GS     +G  + +L  N   P  +  L    +  V+  C   H  A+   G
Sbjct: 39  KNGYLYTMGSNALGKLGIGQQSLQ-NSFQPQLVSALSKYKVMQVS--CGHSHTCAIIDSG 95

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-----IKKAGAGRSHTVVVTEDGNSL 132
             ++WG +  GQLG         P +V+  S  K     +     G  HTV V ++G   
Sbjct: 96  ELFSWGDSSEGQLGINSNGSHYNPQLVN-FSDLKGINTFVTDVSCGYYHTVAVLKNGQVC 154

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
           +FG  K GQLG+G+   + +P  +  L S++    CG   T++L   E   + + GL   
Sbjct: 155 SFGSGKKGQLGTGNQNKQYKPFLLNSL-SQIIKVKCGFYHTLFLD--ESGRVYSCGLNDE 211

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV-------------------- 232
           GQLG G  NE N     + L  E     +  A      I                     
Sbjct: 212 GQLGQG-HNEGNISSPRLVLELEHSFIKKIFAGSHSAAITDANEIYFFGKSQLGQFLYPQ 270

Query: 233 ----------KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
                     +++ G +  VAV   G VY+WG    G+LG  +     +P  V+      
Sbjct: 271 LVRICQGDVNEISIGNHFGVAVTYDGKVYSWGINQQGQLGQGDSDVRIIPSLVEPLNEKK 330

Query: 283 VLPP----EAVISAGSVNSSCTA 301
           V+        VI  G V +S  A
Sbjct: 331 VISATCGENYVICLGQVMNSRLA 353



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 83/183 (45%), Gaps = 21/183 (11%)

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPE 287
            I ++ACG +HT  V   GY+YT G    G+LG  +Q  ++ + P+ V    +  V+   
Sbjct: 23  VIHQLACGLDHTAFVAKNGYLYTMGSNALGKLGIGQQSLQNSFQPQLVSALSKYKVMQ-- 80

Query: 288 AVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLM---DLSGWNLRCMD-S 338
             +S G  ++      G+L+ W     G+L  N +   Y   L+   DL G N    D S
Sbjct: 81  --VSCGHSHTCAIIDSGELFSWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVS 138

Query: 339 GNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
              +H V    +    S+G  + G+LG G   Q     P  ++ L    +I V CG+ H+
Sbjct: 139 CGYYHTVAVLKNGQVCSFGSGKKGQLGTG--NQNKQYKPFLLNSLS--QIIKVKCGFYHT 194

Query: 397 LVI 399
           L +
Sbjct: 195 LFL 197



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 61/264 (23%), Positives = 108/264 (40%), Gaps = 22/264 (8%)

Query: 148 RNEIEPSPVRCLVSEVT-ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           RN +   P  C    V    ACG D T +++  +   +   G    G+LG G  +  N+ 
Sbjct: 8   RNSVFYYPRVCSFQIVIHQLACGLDHTAFVA--KNGYLYTMGSNALGKLGIGQQSLQNS- 64

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                       +P+ ++AL+   +++V+CG +HT A+   G +++WG    G+LG    
Sbjct: 65  -----------FQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELFSWGDSSEGQLGINSN 113

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYP 322
              + P+ V+      +      +S G  ++      GQ+  +G  K      G+     
Sbjct: 114 GSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGKKGQLGTGNQNKQY 173

Query: 323 KPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           KP +  S   +  +  G  H  F+       S G    G+LG G + + + + P+ V  L
Sbjct: 174 KPFLLNSLSQIIKVKCGFYHTLFLDESGRVYSCGLNDEGQLGQG-HNEGNISSPRLVLEL 232

Query: 382 EGMHVISVACGYGHSLVIVDRTNV 405
           E   +  +  G  HS  I D   +
Sbjct: 233 EHSFIKKIFAG-SHSAAITDANEI 255


>gi|255083701|ref|XP_002508425.1| predicted protein [Micromonas sp. RCC299]
 gi|226523702|gb|ACO69683.1| predicted protein [Micromonas sp. RCC299]
          Length = 261

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 117/250 (46%), Gaps = 16/250 (6%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           C + HC A+D +G   TWG    G+LGHG    I+ D P  V+ +S  K+ +   G +HT
Sbjct: 3   CGASHCAALDPDGALMTWGLASSGELGHGGWTPIEVDIPRRVNSMSGVKVTQIATGANHT 62

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
           VVV+E G     G  +HGQLG G   +      +  L    VT    G   TV L+    
Sbjct: 63  VVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGMNVTRAVAGGSHTVCLTDC-- 120

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S+ + G  +YGQLG G D E  T  + V +        R         IV+ A G NH+
Sbjct: 121 GSVWSWGACRYGQLGLGDDWEGRTPKNGVWIKVPCACGDRC-------KIVRAAAGGNHS 173

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
             + + G V T G   YG+LGH + K  +   RV+  + + +    A +  G  ++    
Sbjct: 174 AVLTACGAVMTTGSNSYGQLGHGDIKKRYAFTRVESLRGSRL----ATVDCGEDHTGAVG 229

Query: 302 GGGQLYMWGK 311
             G+LY+WG+
Sbjct: 230 DSGRLYLWGR 239



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 42/253 (16%)

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHG--TDNEYNTKDSSVKLAYEAQPRPRAIA 224
           +CGA     L   +GA ++  GL   G+LGHG  T  E +               PR + 
Sbjct: 2   SCGASHCAALDP-DGA-LMTWGLASSGELGHGGWTPIEVDI--------------PRRVN 45

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           +++G  + ++A G NHTV V   G ++T G G +G+LGH    D    +R++  +  NV 
Sbjct: 46  SMSGVKVTQIATGANHTVVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGMNV- 104

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGW--------- 331
              AV  AG  ++ C    G ++ WG  +      GDDW    P   +  W         
Sbjct: 105 -TRAV--AGGSHTVCLTDCGSVWSWGACRYGQLGLGDDWEGRTPKNGV--WIKVPCACGD 159

Query: 332 ---NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
               +R    GN    + A  + ++ G   YG+LG+G    K      +V+ L G  + +
Sbjct: 160 RCKIVRAAAGGNHSAVLTACGAVMTTGSNSYGQLGHGDI--KKRYAFTRVESLRGSRLAT 217

Query: 389 VACGYGHSLVIVD 401
           V CG  H+  + D
Sbjct: 218 VDCGEDHTGAVGD 230



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 13/141 (9%)

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--IS 291
           V+CG +H  A+D  G + TWG    G LGH      W P  VD+ +R N +    V  I+
Sbjct: 1   VSCGASHCAALDPDGALMTWGLASSGELGH----GGWTPIEVDIPRRVNSMSGVKVTQIA 56

Query: 292 AGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
            G+ ++   + GG L+  G+ ++      + +D    + L  L G N+    +G  H   
Sbjct: 57  TGANHTVVVSEGGGLWTCGRGRHGQLGHGHFNDAGPLQRLEALRGMNVTRAVAGGSHTVC 116

Query: 346 GADSSCI-SWGHAQYGELGYG 365
             D   + SWG  +YG+LG G
Sbjct: 117 LTDCGSVWSWGACRYGQLGLG 137



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 43/98 (43%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V A     H   +   G   T G N  GQLGHGD  +R   T V  L   ++     G
Sbjct: 162 KIVRAAAGGNHSAVLTACGAVMTTGSNSYGQLGHGDIKKRYAFTRVESLRGSRLATVDCG 221

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
             HT  V + G    +G    GQLGSG  R+   P+PV
Sbjct: 222 EDHTGAVGDSGRLYLWGRGDWGQLGSGDGRSHWSPAPV 259


>gi|302823907|ref|XP_002993601.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
 gi|300138529|gb|EFJ05293.1| hypothetical protein SELMODRAFT_449178 [Selaginella moellendorffii]
          Length = 441

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 152/381 (39%), Gaps = 56/381 (14%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            +R +A  C   H  A+  +G  +TWG N+ GQLG G +   DRP  V  L    +K   
Sbjct: 45  SLRLIAISCGLEHTAAIASDGSLFTWGSNQFGQLGDGSETNSDRPKRVYGLRDEAVKSVA 104

Query: 117 AGRSHTVVVTE--DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
            G + T  + +  DG      W      GS S R     S V    + V   ACG     
Sbjct: 105 CGANCTAAIADSRDGTCRGRMWIWGQNQGSNSPR---LFSGVFSSSTVVIQVACGGAHAA 161

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNE----YNTKDSSVKLAYEAQPRPRAIAALAGET 230
            LS  E   +   G  ++GQLG G   E         S VK   E     +         
Sbjct: 162 ALS--EHGVLQTWGYNEHGQLGRGISCEGLQGAKIVTSFVKFLNEPVETVK--------- 210

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD---EWVPRRVDVFQRNNVLPPE 287
           + +V CG  HT A+   G VYTWG G  G+LGHR  +    E  PRRV   +  +V+   
Sbjct: 211 VKQVVCGEYHTAAIAHNGDVYTWGLGSSGQLGHRSLQSGNKEVFPRRVVTLEGVDVVQ-- 268

Query: 288 AVISAGSVNSSCTAGGGQLYMWG--------------KLKNNGD-DWMYPKPLMDLSGWN 332
             ISAG V+S   +  G LYMWG              ++    D D+ + +  + +    
Sbjct: 269 --ISAGGVHSCAISSAGGLYMWGGSHAGQLGLGPRQDRICGTSDIDFFFQRIPVLVIPSG 326

Query: 333 LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA------MPKKVDILEGMHV 386
            R    G++H  V          + +    GY  YGQ  S        P  +D   G  +
Sbjct: 327 ARSATCGDLHTLV-------RMANGRLLGCGYNSYGQADSGKAYYAWYPSPIDWCVG-EI 378

Query: 387 ISVACGYGHSLVIVDRTNVGE 407
             +A G GHS V+   +N+ E
Sbjct: 379 TCLAAGGGHSAVLTQASNLKE 399



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 15/144 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           V P R+  L GVD+  ++AG V  H  A+   G  Y WG +  GQLG G +  +DR    
Sbjct: 253 VFPRRVVTLEGVDVVQISAGGV--HSCAISSAGGLYMWGGSHAGQLGLGPR--QDRICGT 308

Query: 105 SELSKY-----------KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
           S++  +             + A  G  HT+V   +G  L  G+N +GQ  SG       P
Sbjct: 309 SDIDFFFQRIPVLVIPSGARSATCGDLHTLVRMANGRLLGCGYNSYGQADSGKAYYAWYP 368

Query: 154 SPVRCLVSEVTATACGADFTVWLS 177
           SP+   V E+T  A G   +  L+
Sbjct: 369 SPIDWCVGEITCLAAGGGHSAVLT 392


>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 866

 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 109/369 (29%), Positives = 170/369 (46%), Gaps = 44/369 (11%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           G+  +  R  P   V    V     S H VA+   G  +TWG N  GQLG+G   Q   P
Sbjct: 483 GDGTTTQRTSPTAVVVSGIVKTAGGSAHSVALGAGGAVWTWGYNAYGQLGNGTTTQVVTP 542

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
           T +  +S   +    AG +HTV ++ DG   A+G+N +GQLG+G+  N++ P  V  L  
Sbjct: 543 TQLPGMS--GVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVPEL-D 599

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            VTA + G+  TV L +    ++   G   YGQLG GT              +  +  P 
Sbjct: 600 GVTAISAGSTHTVALKA--DGTVWAWGSNLYGQLGDGT--------------FTHRSSPV 643

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            + +L  E +V +A G  HTVAV   G ++ WG+G  G+LG     ++ VP +V      
Sbjct: 644 QVPSL--ENVVSIAAGHFHTVAVKGDGTLWVWGYGPQGQLGLGTTTNQSVPVQV------ 695

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMD 337
           + L     I+AG  ++      GQ++ WG   +   GD  +  +  P++     N+  + 
Sbjct: 696 SGLGHAVAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLTNVIALA 755

Query: 338 SGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSA----MPKKVDILEGM-HVISV-- 389
           +G     V   D +  ++G+   G+LG G    +SS     M   VD+  G+ H++ +  
Sbjct: 756 AGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSSPTATLMNSVVDLSSGVNHMMGLRK 815

Query: 390 -----ACGY 393
                ACGY
Sbjct: 816 DAWVRACGY 824



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 93/318 (29%), Positives = 137/318 (43%), Gaps = 36/318 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H + V   G  + WG N  GQLG+G + QR+ PT V  L+  ++  A AG  H+V VTED
Sbjct: 156 HTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGLN--QVVSASAGAEHSVAVTED 213

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNA 187
           G+   +G N +GQLG G+  N +   PV+   +S+V A A     TV L +    ++   
Sbjct: 214 GSVWTWGSNAYGQLGDGT--NTLRAVPVQVPGMSDVVAVAAAGSRTVALKA--DGTVWTW 269

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G+   G+LG GT                    P  +  L+G  +  +A G  HT+AV   
Sbjct: 270 GINSSGELGDGTTTH--------------SLLPIQVPNLSG--VTNIAAGLWHTLAVKKD 313

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G  ++WG   YG+LG     +   P  V        L      S G V++      G  +
Sbjct: 314 GSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRAL------SGGVVHTVALKWDGTAW 367

Query: 308 MWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGEL 362
            WG        NG       P+   +      +D+G  H      D +  +WG   YG L
Sbjct: 368 GWGYNSAGQLGNGTTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGAL 427

Query: 363 GYGPYGQKSSAMPKKVDI 380
           G G     SS++P +V +
Sbjct: 428 GTG--NTTSSSVPVQVPL 443



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 172/418 (41%), Gaps = 93/418 (22%)

Query: 49  RLRPLVG---VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           RLRP++      +R ++ G V  H VA+  +G  + WG N  GQLG+G       P  V+
Sbjct: 335 RLRPVLVAGLTGVRALSGGVV--HTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVA 392

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP------------ 153
            L++    +  AG  HT+   +DG   A+G N +G LG+G+  +   P            
Sbjct: 393 ALTQ--AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSGVRWFG 450

Query: 154 -----------------------------------------SPVRCLVSEVTATACGADF 172
                                                    SP   +VS +  TA G+  
Sbjct: 451 AGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTSPTAVVVSGIVKTAGGSAH 510

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           +V L +  G ++   G   YGQLG+GT  +  T                 +  ++G  ++
Sbjct: 511 SVALGA--GGAVWTWGYNAYGQLGNGTTTQVVTP--------------TQLPGMSG--VI 552

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            VA G NHTVA+ + G V  WG+  YG+LG+    ++  P+ V        L     ISA
Sbjct: 553 DVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTANQLTPQSVP------ELDGVTAISA 606

Query: 293 GSVNSSCTAGGGQLYMWG-KLKNNGDDWMY---PKPLMDLSGWNLRCMDSGNMHHF-VGA 347
           GS ++      G ++ WG  L     D  +     P+   S  N+  + +G+ H   V  
Sbjct: 607 GSTHTVALKADGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKG 666

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           D +   WG+   G+LG G    +S  +P +V  L   H +++A G  H++ ++    V
Sbjct: 667 DGTLWVWGYGPQGQLGLGTTTNQS--VPVQVSGLG--HAVAIAAGGYHTVALLANGQV 720



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 157/366 (42%), Gaps = 50/366 (13%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +PTR+R L     + V+A   + H VAV  +G  +TWG N  GQLG G    R  P  V 
Sbjct: 187 APTRVRGL----NQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPVQVP 242

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            +S   +    A  S TV +  DG    +G N  G+LG G+  + + P  V  L S VT 
Sbjct: 243 GMS--DVVAVAAAGSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVPNL-SGVTN 299

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G   T  L+  +  S  + G   YGQLG GT                 + RP  +A 
Sbjct: 300 IAAGLWHT--LAVKKDGSAWSWGNNAYGQLGDGTTLN--------------RLRPVLVAG 343

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G  +  ++ G  HTVA+   G  + WG+   G+LG+    +  +P +V    +     
Sbjct: 344 LTG--VRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTNSSIPVQVAALTQ----- 396

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPL-MDLSGWNLRCMDSGN 340
               I AG  ++      G LY WG         G+      P+ + LSG  +R   +G 
Sbjct: 397 -AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSVPVQVPLSG--VRWFGAGY 453

Query: 341 MHHF-------VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +         +    +  +WGH   GELG G   Q++S  P  V ++ G  ++  A G 
Sbjct: 454 YYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTS--PTAV-VVSG--IVKTAGGS 508

Query: 394 GHSLVI 399
            HS+ +
Sbjct: 509 AHSVAL 514



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 69/145 (47%), Gaps = 6/145 (4%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA      H VA+   G+ +TWG N  GQLG    IQR  P +V  L+   +    AG  
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSSGQLGDATIIQRYSPVLVPGLT--NVIALAAGGY 759

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
            T V+  DG   AFG+N +GQLG G+  +    SP   L++ V   + G +  + L   +
Sbjct: 760 TTAVLKRDGTVWAFGYNPNGQLGDGTTTS--RSSPTATLMNSVVDLSSGVNHMMGLR--K 815

Query: 181 GASILNAGLPQYGQLGHGTDNEYNT 205
            A +   G    GQLG GT  +  T
Sbjct: 816 DAWVRACGYNSAGQLGDGTTTQRPT 840



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 118/285 (41%), Gaps = 34/285 (11%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G  HT+ V   G+  A+G N  GQLG+G       P+ VR L ++V + + GA+ +V  +
Sbjct: 153 GVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL-NQVVSASAGAEHSV--A 209

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             E  S+   G   YGQLG GT+                  R   +       +V VA  
Sbjct: 210 VTEDGSVWTWGSNAYGQLGDGTNTL----------------RAVPVQVPGMSDVVAVAAA 253

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            + TVA+ + G V+TWG    G LG        +P +V        L     I+AG  ++
Sbjct: 254 GSRTVALKADGTVWTWGINSSGELGDGTTTHSLLPIQVP------NLSGVTNIAAGLWHT 307

Query: 298 SCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
                 G  + WG        +G      +P++      +R +  G +H   +  D +  
Sbjct: 308 LAVKKDGSAWSWGNNAYGQLGDGTTLNRLRPVLVAGLTGVRALSGGVVHTVALKWDGTAW 367

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            WG+   G+LG G     +S++P +V  L     + +  G  H+L
Sbjct: 368 GWGYNSAGQLGNGT--TTNSSIPVQVAALT--QAVEIDAGGYHTL 408



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 17/173 (9%)

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            V+ G  HT+ V S G ++ WG    G+LG+ ++     P RV     N V+      SA
Sbjct: 149 SVSPGVYHTLEVKSGGSLWAWGNNPSGQLGNGQRTQRNAPTRVRGL--NQVVSA----SA 202

Query: 293 GSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVG 346
           G+ +S      G ++ WG        +G + +   P+  + G +  +    +G+    + 
Sbjct: 203 GAEHSVAVTEDGSVWTWGSNAYGQLGDGTNTLRAVPV-QVPGMSDVVAVAAAGSRTVALK 261

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           AD +  +WG    GELG G      S +P +V  L G  V ++A G  H+L +
Sbjct: 262 ADGTVWTWGINSSGELGDGT--TTHSLLPIQVPNLSG--VTNIAAGLWHTLAV 310


>gi|22795248|gb|AAN08220.1| putative chromosome condensation regulator [Oryza sativa Japonica
           Group]
 gi|108709680|gb|ABF97475.1| regulator of chromosome condensation, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 505

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 169/429 (39%), Gaps = 76/429 (17%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  + +L  P  L P +     G ++R++   C   H  AV  +G  YTWG N+ GQL
Sbjct: 34  RKGK-ECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQL 92

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-------GNSLAFGWNKH---- 139
           G G +     P  V  L    +K    G   T  V E          S  + W ++    
Sbjct: 93  GDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSD 152

Query: 140 ------GQLGSGSIRNEIEPSPV----------RCLVSEVT-ATACGADFTVWLSSVEGA 182
                 G     +     E S +          RCL  EV    +CGA   + LS  E  
Sbjct: 153 YPRLFWGAFAPNTASGATEQSTITCASSQFLSLRCLSLEVIHQVSCGAVHVMALS--EDG 210

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNH 240
            +   G  +YGQLG G  +E   + + V  AY       P  +       IV+V+CG  H
Sbjct: 211 LLQAWGYNEYGQLGRGCTSE-GLQGARVLNAYARFLDEAPELV------KIVRVSCGEYH 263

Query: 241 TVAVDSKGYVYTWGFGGYGRLGH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
           T A+   G VYTWG G  G+LGH   +    E +PRRV    R  +      +S G V+S
Sbjct: 264 TAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD----VSCGGVHS 319

Query: 298 SCTAGGGQLYMWG----------------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
                 G LY WG                    NG D +     + +    ++ +  G+ 
Sbjct: 320 CAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHS 379

Query: 342 HHFVGA-DSSCISWGHAQYGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLV 398
           H  V   DS    WG+  YG+       +KS+    P  VD   G  V  +A G GHS V
Sbjct: 380 HTLVSMKDSRIYGWGYNSYGQAA----NEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAV 434

Query: 399 IVDRTNVGE 407
           + D  ++ E
Sbjct: 435 LTDACSLKE 443


>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
           domestica]
          Length = 531

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G      + + + P +L  L G  I+ ++ G    H +    +G  Y
Sbjct: 42  EVFVFGLNCSNCLGTGD---NQSTIVPKKLEALCGKKIKSLSYG-SGPHVLLSTEDGMVY 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P  + + L   ++ +   G  H++ +  DG   A+G+N  
Sbjct: 98  AWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC 157

Query: 140 GQLGSGSIRNEIEPSPV-RCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL +  V + ACG   T  ++ ++   +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +                Q  P  +AAL    ++++ CG  HT+A+  +G +Y WG   
Sbjct: 216 GNNGN--------------QLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANT 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + +   P ++ V ++  V+   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNLLSPAQIMV-EKERVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT +     FG N    LG+G  ++ I P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEAIYVTHNDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGM-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+ + G VY WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V+S   G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V+
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 54/189 (28%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ + AL G+ I  ++ G+  H +     G VY WG  GY +LG+        P +V   
Sbjct: 65  PKKLEALCGKKIKSLSYGSGPHVLLSTEDGMVYAWGHNGYSQLGNGTTNQGIAPIQV--- 121

Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
              N+L  + + ++ GS +S   A  G++Y                              
Sbjct: 122 -CTNLLIKQVIEVACGSHHSMALAADGEVY------------------------------ 150

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
                          +WG+   G++G G    + +  P+KV + L    V+S+ACG   S
Sbjct: 151 ---------------AWGYNNCGQVGSGSTANQPT--PRKVTNCLHIKRVVSIACGQTSS 193

Query: 397 LVIVDRTNV 405
           + ++D   V
Sbjct: 194 MAVLDNGEV 202


>gi|222625331|gb|EEE59463.1| hypothetical protein OsJ_11655 [Oryza sativa Japonica Group]
          Length = 581

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 169/429 (39%), Gaps = 76/429 (17%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  + +L  P  L P +     G ++R++   C   H  AV  +G  YTWG N+ GQL
Sbjct: 110 RKGK-ECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQL 168

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-------GNSLAFGWNKH---- 139
           G G +     P  V  L    +K    G   T  V E          S  + W ++    
Sbjct: 169 GDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSD 228

Query: 140 ------GQLGSGSIRNEIEPSPV----------RCLVSEVT-ATACGADFTVWLSSVEGA 182
                 G     +     E S +          RCL  EV    +CGA   + LS  E  
Sbjct: 229 YPRLFWGAFAPNTASGATEQSTITCASSQFLSLRCLSLEVIHQVSCGAVHVMALS--EDG 286

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNH 240
            +   G  +YGQLG G  +E   + + V  AY       P  +       IV+V+CG  H
Sbjct: 287 LLQAWGYNEYGQLGRGCTSE-GLQGARVLNAYARFLDEAPELV------KIVRVSCGEYH 339

Query: 241 TVAVDSKGYVYTWGFGGYGRLGH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
           T A+   G VYTWG G  G+LGH   +    E +PRRV    R  +      +S G V+S
Sbjct: 340 TAAISENGEVYTWGLGSMGQLGHCSLQSGDKELIPRRVVALDRTVIRD----VSCGGVHS 395

Query: 298 SCTAGGGQLYMWG----------------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
                 G LY WG                    NG D +     + +    ++ +  G+ 
Sbjct: 396 CAVTEDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVQLVTCGHS 455

Query: 342 HHFVG-ADSSCISWGHAQYGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLV 398
           H  V   DS    WG+  YG+       +KS+    P  VD   G  V  +A G GHS V
Sbjct: 456 HTLVSMKDSRIYGWGYNSYGQAA----NEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAV 510

Query: 399 IVDRTNVGE 407
           + D  ++ E
Sbjct: 511 LTDACSLKE 519


>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
 gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
          Length = 1058

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 153/335 (45%), Gaps = 38/335 (11%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P  +       +++   G  HT+ +T  G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVACGHRHTLFLTATGKVYACGSN 67

Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            + QLG    + R ++ P     ++ +++   CG+  ++ LS  +   +L+ G    GQL
Sbjct: 68  DYSQLGHDLPTKRPQLIPELQDYVIIQIS---CGSRHSLALS--DWGQVLSWGDNDCGQL 122

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GH T+ E       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+WG 
Sbjct: 123 GHATEKEI------VQL-------PKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169

Query: 256 GGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
             YG+LG     D      P R+       +  P A I+ G  +S   +  G ++ WG+ 
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYG 365
                  N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+LG+G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 286 --FSSNEMLPRMVMELMGSTITQVACGNRHTLALV 318



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 113/235 (48%), Gaps = 25/235 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
           P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG     D    + P  
Sbjct: 134 PKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLR 191

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           ++ L    +     G +H+ ++++ G    +G N  GQLG     N   P+ ++ L +  
Sbjct: 192 LTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPR 221
           V   ACG +F+V+L++  G     AG   YGQLGHG + NE                 PR
Sbjct: 252 VRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---------------LPR 294

Query: 222 AIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  K   +P+ V
Sbjct: 295 MVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 167/371 (45%), Gaps = 35/371 (9%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            G+ L+C GST    +G   G  D  +++P ++       ++ VA G    H + +   G
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPRQIPWTPDTAVQQVACG--HRHTLFLTATG 59

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + Y  G N+  QLGH   +   RP ++ EL  Y I +   G  H++ +++ G  L++G N
Sbjct: 60  KVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 138 KHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             GQLG  + +  ++ P  VR LVS+ V   ACG + ++ L+S     + + G   YGQL
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQL 175

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  + N+    +            P  +  L G  +  +ACG NH+  +   G V+ WG 
Sbjct: 176 GVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WG 310
              G+LG  ++ +   P ++   +   V      ++ G   S      G ++      +G
Sbjct: 225 NNCGQLGLNDETNRAYPTQLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYG 280

Query: 311 KLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPY 367
           +L +    + M P+ +M+L G  +  +  GN H    V +     ++G    G+L  G  
Sbjct: 281 QLGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLALVPSRGKVYAFGLGSSGQL--GTR 338

Query: 368 GQKSSAMPKKV 378
             KS  +P+ V
Sbjct: 339 STKSLMLPQVV 349


>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
          Length = 892

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 20/231 (8%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK-IQRDRPT 102
           L  P  L     + +  VA G  S H VA+  EG+ YTWG+N RGQLG G K      P 
Sbjct: 105 LYLPRMLEAFCRIPVSQVACG--SRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQ 162

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VS 161
            V  LS   + +  AG  H+  ++  G+   +G N  GQLG G  ++   P+ V  L + 
Sbjct: 163 CVRSLSGMPLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           + T+ +CG D T  L+  +  ++   G  Q+GQLGH +                 + RPR
Sbjct: 223 KTTSISCGKDHTAILT--KHGTVFTFGSGQFGQLGHNSSRN--------------ELRPR 266

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            +A L G  + ++ACG  HT+ +     +Y++G     +LG        VP
Sbjct: 267 LVAELWGAKVTRIACGRYHTLVLQENNKIYSFGCNDQNQLGRSNDSHPSVP 317



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 81/160 (50%), Gaps = 5/160 (3%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++ SP  +R L G+ +  V+AG    H  A+ V G  + WGRN+ GQLG GD   R  PT
Sbjct: 157 SISSPQCVRSLSGMPLVQVSAG--GDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPT 214

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            V  L+  K      G+ HT ++T+ G    FG  + GQLG  S RNE+ P  V  L  +
Sbjct: 215 SVDSLNLKKTTSISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGA 274

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           +VT  ACG   T+ L   E   I + G     QLG   D+
Sbjct: 275 KVTRIACGRYHTLVLQ--ENNKIYSFGCNDQNQLGRSNDS 312



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 119/304 (39%), Gaps = 45/304 (14%)

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
           + I    AGR        +GN+     +     G    R   +   V+C   ++ A  CG
Sbjct: 29  FHIADLSAGRGALAFAKTNGNAFVMRTSD----GENGARMRGKQKFVKC-KEKIEAVGCG 83

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
            D  + LS  E  S+    + Q   L                        PR + A    
Sbjct: 84  DDEVILLS--EKGSVYRVDVTQALYL------------------------PRMLEAFCRI 117

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEA 288
            + +VACG+ HTVA+  +G VYTWG    G+LG  ++      P+ V    R+    P  
Sbjct: 118 PVSQVACGSRHTVALTKEGQVYTWGQNSRGQLGLGKKGCSISSPQCV----RSLSGMPLV 173

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            +SAG  +S   +  G ++ WG+         +  D   P  +  L+      +  G  H
Sbjct: 174 QVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDSQDRCTPTSVDSLNLKKTTSISCGKDH 233

Query: 343 H-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              +    +  ++G  Q+G+LG+     ++   P+ V  L G  V  +ACG  H+LV+ +
Sbjct: 234 TAILTKHGTVFTFGSGQFGQLGHN--SSRNELRPRLVAELWGAKVTRIACGRYHTLVLQE 291

Query: 402 RTNV 405
              +
Sbjct: 292 NNKI 295



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 65/146 (44%), Gaps = 9/146 (6%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +SC   H   +   G  +T+G  + GQLGH       RP +V+EL   K+ +   GR HT
Sbjct: 227 ISCGKDHTAILTKHGTVFTFGSGQFGQLGHNSSRNELRPRLVAELWGAKVTRIACGRYHT 286

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS-PVRCLVSEVTATACGADFTVWLSSVEG 181
           +V+ E+    +FG N   QLG     N+  PS P+  L+ +V    C   +     +   
Sbjct: 287 LVLQENNKIYSFGCNDQNQLGRS---NDSHPSVPLPVLLPQV--YKCSLLYREIQRTFSS 341

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKD 207
           AS LN    +       T  +Y+  D
Sbjct: 342 ASCLNRSFLEKKDKYFQTSPKYHGLD 367


>gi|403330678|gb|EJY64235.1| hypothetical protein OXYTRI_24854 [Oxytricha trifallax]
          Length = 1365

 Score =  107 bits (267), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 90/355 (25%), Positives = 153/355 (43%), Gaps = 41/355 (11%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI--QRDRPTIVSELSKYKIK 113
           + I++V+  C   H   +      Y+ G N  GQLG GD     ++ P +V  L   K  
Sbjct: 116 IGIKYVS--CGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVEALMDQKPI 173

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR------CLVSEVTATA 167
               G +HT+V TE G+  ++G    G LG+G++ ++  P  +          S++   +
Sbjct: 174 SIACGANHTLVCTERGDVYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVS 233

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
            G  F+  L   +   +   G    GQLG G  ++ N   S  K                
Sbjct: 234 AGMRFSAILD--QSGRVYTCGQNDAGQLGIGGRDQENIPISIKKFP-------------- 277

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            E +  +ACG  H + +  +G VY+ G   +G+LG   +++   P  +          P 
Sbjct: 278 -ERVSMIACGQMHLLMLTKQGTVYSCGANSFGQLGLNNKRNSSSPLLIQDISH----IPM 332

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF--- 344
             ++AGS ++S +   G LY+WG       +++ P  +  + G  +  +  GN  HF   
Sbjct: 333 RYVAAGSFSASISYDSGDLYLWG--SGVFGEFLTPHRVKTIKGMTVS-VSIGN--HFGIA 387

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           V  D    SWGH   GELG G + ++ +  P+ ++ L    V  V+CG   S+ +
Sbjct: 388 VNQDGIVYSWGHNNSGELGQGDFDERPT--PQIINQLNDKIVTLVSCGRNFSIAL 440



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 17/183 (9%)

Query: 132 LAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGL 189
            ++G ++ GQLG G  +  +  P P  C  +  +   +CG +   ++++  G  + + G 
Sbjct: 85  FSWGSDQAGQLGLGQSQIGKSYPVPRYCTYNIGIKYVSCGDEHAAFITT--GNMVYSMGS 142

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
              GQLG G        D S+K+    +  P  + AL  +  + +ACG NHT+    +G 
Sbjct: 143 NTNGQLGVG--------DMSLKM----KNSPMLVEALMDQKPISIACGANHTLVCTERGD 190

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYM 308
           VY+WG G +G LG     D+++P+ + +         + + +SAG   S+     G++Y 
Sbjct: 191 VYSWGQGIFGALGAGNLDDQFLPKLIHISHDQLSTKSQMIQVSAGMRFSAILDQSGRVYT 250

Query: 309 WGK 311
            G+
Sbjct: 251 CGQ 253



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           G  ++P R++ + G+ +  V+ G  +   +AV+ +G  Y+WG N  G+LG GD  +R  P
Sbjct: 360 GEFLTPHRVKTIKGMTVS-VSIG--NHFGIAVNQDGIVYSWGHNNSGELGQGDFDERPTP 416

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
            I+++L+   +     GR+ ++ + +     A   N+H QL S
Sbjct: 417 QIINQLNDKIVTLVSCGRNFSIALGQTLKQEAALCNQHEQLQS 459



 Score = 48.5 bits (114), Expect = 0.007,   Method: Composition-based stats.
 Identities = 53/224 (23%), Positives = 90/224 (40%), Gaps = 38/224 (16%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G +  CG+  +  +G        N  SP  ++ +  + +R+VAAG  S   ++ D  G
Sbjct: 295 KQGTVYSCGANSFGQLGLNNKR---NSSSPLLIQDISHIPMRYVAAGSFSA-SISYD-SG 349

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y WG    G+     +++  +   VS            G    + V +DG   ++G N
Sbjct: 350 DLYLWGSGVFGEFLTPHRVKTIKGMTVS---------VSIGNHFGIAVNQDGIVYSWGHN 400

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSV--EGASILNAGLPQYGQ 194
             G+LG G       P  +  L  + VT  +CG +F++ L     + A++ N    Q+ Q
Sbjct: 401 NSGELGQGDFDERPTPQIINQLNDKIVTLVSCGRNFSIALGQTLKQEAALCN----QHEQ 456

Query: 195 LG-----HGTDNEYNT------------KDSSVKLAYEAQPRPR 221
           L        T N + T              S +  +Y++QP  R
Sbjct: 457 LQSQNSYQNTSNTFQTHFNYNSNQNQAQNGSFIGQSYQSQPSHR 500



 Score = 40.0 bits (92), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 38/86 (44%), Gaps = 1/86 (1%)

Query: 321 YPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           YP P        ++ +  G+ H  F+   +   S G    G+LG G    K    P  V+
Sbjct: 106 YPVPRYCTYNIGIKYVSCGDEHAAFITTGNMVYSMGSNTNGQLGVGDMSLKMKNSPMLVE 165

Query: 380 ILEGMHVISVACGYGHSLVIVDRTNV 405
            L     IS+ACG  H+LV  +R +V
Sbjct: 166 ALMDQKPISIACGANHTLVCTERGDV 191


>gi|330796931|ref|XP_003286517.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
 gi|325083498|gb|EGC36949.1| hypothetical protein DICPUDRAFT_97415 [Dictyostelium purpureum]
          Length = 815

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/287 (29%), Positives = 136/287 (47%), Gaps = 23/287 (8%)

Query: 26  GSTCWDAVGRRKGAL-DGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
            ST   + G+  G + D N  +P +++ L+   ++  ++AG       AV   G+ +TWG
Sbjct: 173 ASTSEQSKGKHIGKIIDYNQTTPIQVQGLLANEEVIDISAGW--AFSAAVTKSGKIFTWG 230

Query: 84  RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
            NE+GQLG   +     P +V  L   KI     GR H   VTEDG+   +G    GQLG
Sbjct: 231 FNEKGQLGLKHRWFNSSPQLVKTLLDVKIVSVSCGRQHIGAVTEDGDLYTWGLGVFGQLG 290

Query: 144 SGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGT 199
             ++++ + P  V        +V+  +CG++FT+ L       IL A G  +Y QLG   
Sbjct: 291 HSNVKSYLHPKKVAAFSLNGIQVSQVSCGSNFTMVLGR---NQILYAFGHGEYAQLGATE 347

Query: 200 DNEY---NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           + ++    ++D+  K +      P+ + AL  + I  V CG  HT+A+     VY WG+G
Sbjct: 348 ETQHLDMGSRDNHFKYS-----SPKVVEALEDKKIKYVTCGHLHTLALTEDNEVYVWGWG 402

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             G LG   ++ + VP+ V       +    + ISAG  +S    G 
Sbjct: 403 SSGCLGLNSKRFQLVPQLVTSISGEEI----SCISAGEKHSLIVRGS 445



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 93/391 (23%), Positives = 161/391 (41%), Gaps = 47/391 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTI 103
           + P  L  L G  I   ++G    H + V   G  Y+WGR + GQLG  +K+    +P +
Sbjct: 23  LEPKVLESLKGKVIVSCSSG--EAHNICVSRFGDVYSWGRGKEGQLGVPEKMLFSTKPNL 80

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
           +  L   ++ K   G  H++ +T+ G    + W   GQL      ++I+ S      +  
Sbjct: 81  IKTLLHERVVKVACGNFHSLALTDQGR--VYEW---GQL------HKIDDSKTGLEATNG 129

Query: 164 TATACGADFTVWLSSVEG--ASILNAGLPQYGQL--GHGTDNEYNTKDSSV-----KLAY 214
                G     + S +E   +  LN     Y      +  D+E +T + S      K+  
Sbjct: 130 LLEMPGMSKPKYQSIIENSVSQYLNGEKEIYDSTSGNNDDDDEASTSEQSKGKHIGKIID 189

Query: 215 EAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
             Q  P  +   LA E ++ ++ G   + AV   G ++TWGF   G+LG + +     P+
Sbjct: 190 YNQTTPIQVQGLLANEEVIDISAGWAFSAAVTKSGKIFTWGFNEKGQLGLKHRWFNSSPQ 249

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKL-KNNGDDWMYPKPL-- 325
            V       ++     +S G  +       G LY W     G+L  +N   +++PK +  
Sbjct: 250 LVKTLLDVKIVS----VSCGRQHIGAVTEDGDLYTWGLGVFGQLGHSNVKSYLHPKKVAA 305

Query: 326 MDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQK----------SSAM 374
             L+G  +  +  G N    +G +    ++GH +Y +LG     Q             + 
Sbjct: 306 FSLNGIQVSQVSCGSNFTMVLGRNQILYAFGHGEYAQLGATEETQHLDMGSRDNHFKYSS 365

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK V+ LE   +  V CG+ H+L + +   V
Sbjct: 366 PKVVEALEDKKIKYVTCGHLHTLALTEDNEV 396



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 60/124 (48%), Gaps = 16/124 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT-ACGADFTVWLSSVEGASILNAGLP 190
           ++ G NK+GQLG  +I+  +EP  +  L  +V  + + G    + +S      + + G  
Sbjct: 4   ISVGNNKNGQLGIENIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRF--GDVYSWGRG 61

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           + GQLG      ++TK             P  I  L  E +VKVACG  H++A+  +G V
Sbjct: 62  KEGQLGVPEKMLFSTK-------------PNLIKTLLHERVVKVACGNFHSLALTDQGRV 108

Query: 251 YTWG 254
           Y WG
Sbjct: 109 YEWG 112



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 2/94 (2%)

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
           N  + + PK L  L G  +    SG  H+  V       SWG  + G+LG  P     S 
Sbjct: 18  NIKEHLEPKVLESLKGKVIVSCSSGEAHNICVSRFGDVYSWGRGKEGQLGV-PEKMLFST 76

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
            P  +  L    V+ VACG  HSL + D+  V E
Sbjct: 77  KPNLIKTLLHERVVKVACGNFHSLALTDQGRVYE 110


>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
          Length = 456

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/337 (26%), Positives = 164/337 (48%), Gaps = 35/337 (10%)

Query: 80  YTWGRNERGQLGH-GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           YTWGR +  +LG  G +    +P ++       I++   G  HT+V+ EDG   +FG+N+
Sbjct: 13  YTWGRAKNYRLGRRGTRDDSCQPELIKVFENCAIQQVACGGGHTLVLLEDGCLHSFGYNQ 72

Query: 139 HGQLGSGS-IRNEIEPS-PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           +GQLG+G+ + + ++ S  +  L +++ A ACG   +  L  V G ++   G  + G+LG
Sbjct: 73  YGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAAL-DVNG-TVFTWGGGKNGRLG 130

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           H   N+  T+    ++ +     PRA          K+ CG + T A+   G +YTWG+G
Sbjct: 131 H---NDEQTRTIPCRITH----LPRA---------HKIFCGYHITAAITDDG-LYTWGWG 173

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----- 311
            +G+LG    +D + P++V +F   N+   +  ++ G  +       G +Y WG      
Sbjct: 174 EHGQLGQGSLEDSYGPKKV-IFDDANLAISQ--LACGDRHCLVRTESGDVYTWGSNEFGQ 230

Query: 312 --LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
             +    + +  P  L  L+G  +  + +G+ H     ++ S  +WG    G+ G+G Y 
Sbjct: 231 LGIGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDY- 289

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
                MP  V+ L G+ ++ V CG+  ++ +    ++
Sbjct: 290 -NDCDMPFLVESLVGVFILKVFCGHNFTVALSKDNDI 325



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 106/228 (46%), Gaps = 20/228 (8%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           R +  +  + +A  C   H  A+DV G  +TWG  + G+LGH D+  R  P  ++ L   
Sbjct: 90  RDISSLSNKLIAVACGRYHSAALDVNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHLP-- 147

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATAC 168
           +  K   G   T  +T+DG    +GW +HGQLG GS+ +   P  V    +   ++  AC
Sbjct: 148 RAHKIFCGYHITAAITDDG-LYTWGWGEHGQLGQGSLEDSYGPKKVIFDDANLAISQLAC 206

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
           G      L   E   +   G  ++GQLG G  NE  +              P  + +LAG
Sbjct: 207 GDRHC--LVRTESGDVYTWGSNEFGQLGIGRYNEIYSS-------------PVLLTSLAG 251

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             +  VA G  H+ AV + G ++TWG G  G+ GH +  D  +P  V+
Sbjct: 252 MMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVE 299



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 160/378 (42%), Gaps = 54/378 (14%)

Query: 36  RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
           R+G  D +   P  ++      I+ VA G    H + +  +G  +++G N+ GQLG+G K
Sbjct: 25  RRGTRDDS-CQPELIKVFENCAIQQVACG--GGHTLVLLEDGCLHSFGYNQYGQLGNGTK 81

Query: 96  IQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
           +    D    +S LS  K+     GR H+  +  +G    +G  K+G+LG     N+ + 
Sbjct: 82  VDSPLDASRDISSLSN-KLIAVACGRYHSAALDVNGTVFTWGGGKNGRLG----HNDEQT 136

Query: 154 SPVRCLVSEVT---ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSS 209
             + C ++ +       CG   T   +++    +   G  ++GQLG G+ ++ Y  K   
Sbjct: 137 RTIPCRITHLPRAHKIFCGYHIT---AAITDDGLYTWGWGEHGQLGQGSLEDSYGPK--- 190

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
                      + I   A   I ++ACG  H +     G VYTWG   +G+LG       
Sbjct: 191 -----------KVIFDDANLAISQLACGDRHCLVRTESGDVYTWGSNEFGQLG------- 232

Query: 270 WVPRRVDVFQRNNVLPPEA-----VISAGSVNSSCTAGGGQLYMWG----KLKNNGD--D 318
            + R  +++    +L   A      ++AG  +S+     G L+ WG        +GD  D
Sbjct: 233 -IGRYNEIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGCGAEGQCGHGDYND 291

Query: 319 WMYPKPLMDLSG-WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P  +  L G + L+     N    +  D+    +G+  YG+LG G   + S   P+K
Sbjct: 292 CDMPFLVESLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGS--KSSCCTPRK 349

Query: 378 VDILEGMHVISVACGYGH 395
           +        I + CG+ H
Sbjct: 350 L-FFSIPGTIDITCGHFH 366



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/136 (35%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  L  L G+ + FVAAG    H  AV   G  +TWG    GQ GHGD    D P +V 
Sbjct: 242 SPVLLTSLAGMMVTFVAAG--DRHSAAVTNTGSLFTWGCGAEGQCGHGDYNDCDMPFLVE 299

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L    I K   G + TV +++D +   FG N +GQLG GS  +   P  +   +     
Sbjct: 300 SLVGVFILKVFCGHNFTVALSKDNDIYVFGNNSYGQLGDGSKSSCCTPRKLFFSIPGTID 359

Query: 166 TACG-ADFTVWLSSVE 180
             CG    T+W +  E
Sbjct: 360 ITCGHFHCTLWTTLEE 375


>gi|145345400|ref|XP_001417200.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577427|gb|ABO95493.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 418

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 143/340 (42%), Gaps = 64/340 (18%)

Query: 46  SPTRLRPLVGV---DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           S     P+ GV   D+R VAAG    H V +   G  +T G N  GQLGH   +      
Sbjct: 54  SSNYFHPVEGVSDLDVRAVAAG--GAHSVFLVAGGHVFTCGLNADGQLGHSAGLPFSPEP 111

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
           ++  L   ++    AG  HT+ V  DG   AFG N  GQLG+G++   I P  +  L  E
Sbjct: 112 MLVRL-DVEVVSVAAGNGHTLCVDVDGCVWAFGKNTAGQLGTGNVDGTI-PRKIGALAKE 169

Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V   ACGA+ +  L+  +   + + G    G LGHG++      D        A+  P
Sbjct: 170 ARVAQVACGAEHS--LAVADDGRVYSWGSSTDGVLGHGSET---WNDGWFYRTARAELAP 224

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           R + +L  + +V VA G  H+  +D +G +YTWG G + +LG                  
Sbjct: 225 RLVRSLEDKKVVAVAAGHMHSACIDDRGNLYTWGQGRFNQLG------------------ 266

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
                    +SA   +   T                     P P+M L    +  +  G 
Sbjct: 267 ---------LSAKPSDHETT---------------------PSPVMSLR--FVHEIACGG 294

Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           +H     ++  +SWG  Q+GELG+G +    SA+PK + +
Sbjct: 295 LHSLANTNAGVVSWGANQHGELGHGHHSDIKSAVPKPIKM 334



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 106/241 (43%), Gaps = 34/241 (14%)

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           L+AG   +G+LGHG+ +E +   S     Y        +  ++   +  VA G  H+V +
Sbjct: 28  LSAGNGDHGRLGHGSPDEAHDGWSPRSSNYF-----HPVEGVSDLDVRAVAAGGAHSVFL 82

Query: 245 DSKGYVYTWGFGGYGRLGHREQ---KDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCT 300
            + G+V+T G    G+LGH        E +  R+DV         E V ++AG+ ++ C 
Sbjct: 83  VAGGHVFTCGLNADGQLGHSAGLPFSPEPMLVRLDV---------EVVSVAAGNGHTLCV 133

Query: 301 AGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSG-WNLRCMDSGNMHHFVGADSSCI-S 353
              G ++ +GK     L     D   P+ +  L+    +  +  G  H    AD   + S
Sbjct: 134 DVDGCVWAFGKNTAGQLGTGNVDGTIPRKIGALAKEARVAQVACGAEHSLAVADDGRVYS 193

Query: 354 WGHAQYGELGYGP---------YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           WG +  G LG+G             ++   P+ V  LE   V++VA G+ HS  I DR N
Sbjct: 194 WGSSTDGVLGHGSETWNDGWFYRTARAELAPRLVRSLEDKKVVAVAAGHMHSACIDDRGN 253

Query: 405 V 405
           +
Sbjct: 254 L 254


>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
 gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
          Length = 489

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 132/285 (46%), Gaps = 39/285 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           NL+ PT +   V  +++FV   C   H   V  +G+  TWG  ++G+LGH  ++Q++   
Sbjct: 174 NLLLPTLI---VAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKN 230

Query: 103 ----------------IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS 146
                           +   L   KI +A  G  HT  +T+DG    +G+ K+G LG G+
Sbjct: 231 KSYSPRSYADYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGN 290

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
                 P  V  L S +    CG D+T  L   +  +I + G  +YGQLG  T +  N  
Sbjct: 291 WDQVDLPKKVEGL-SNIVKIDCGMDYTFALD--KDGNIYSWGSNRYGQLGT-TQSNINKH 346

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
           +  ++L     P            +V ++CG  H+  ++ KG  + WG+G  G+LGH+E+
Sbjct: 347 NVPIQLQL---PH-------GSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEK 396

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            +   P++++  +     P   V+  G      T   G+L+++G+
Sbjct: 397 TNLNQPKKLEFTE-----PLRRVVCGGGHTGVITT-AGKLFLFGR 435



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 141/345 (40%), Gaps = 45/345 (13%)

Query: 81  TWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           +WG  + GQLG+G++ +    P+ V  LS   I +  A    +  VT  G    +G  + 
Sbjct: 101 SWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTSQGQIYTWGKTRG 160

Query: 140 GQLGS----GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           G L          N + P+ +     +    ACG      ++  +   ++  G P  G+L
Sbjct: 161 GSLSQQKSLSRATNLLLPTLIVAPEVQFVQVACGKTHLAGVT--KDGKLITWGNPDQGKL 218

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIA----------ALAGETIVKVACGTNHTVAVD 245
           GH    +  +K+ S          PR+ A          AL  + I++ +CG  HT  + 
Sbjct: 219 GHNAQLQQESKNKSYS--------PRSYADYNAINFVGGALESKKIIQASCGFQHTACLT 270

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
             G VYTWGFG  G LGH       +P++V+    +N++     I  G   +      G 
Sbjct: 271 QDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGL--SNIVK----IDCGMDYTFALDKDGN 324

Query: 306 LYMWGK--------LKNNGDDWMYPKPLMDLSG-WNLRCMDSGNMHH-FVGADSSCISWG 355
           +Y WG          ++N +    P  L    G  ++  +  G  H  F+        WG
Sbjct: 325 IYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWG 384

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +   G+LG+    + +   PKK++  E +    V CG GH+ VI 
Sbjct: 385 YGNDGQLGHKE--KTNLNQPKKLEFTEPLR--RVVCGGGHTGVIT 425



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 97/222 (43%), Gaps = 24/222 (10%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + + A C   H   +  +G  YTWG  + G LGHG+  Q D P  V  LS   I K   G
Sbjct: 255 KIIQASCGFQHTACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLSN--IVKIDCG 312

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV----SEVTATACGADFTV 174
             +T  + +DGN  ++G N++GQLG+          P++  +    S V   +CG + + 
Sbjct: 313 MDYTFALDKDGNIYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSA 372

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           +L+    A I   G    GQLGH      N            QP+         E + +V
Sbjct: 373 FLNDKGEAFIW--GYGNDGQLGHKEKTNLN------------QPKKLEFT----EPLRRV 414

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
            CG  HT  + + G ++ +G G  G+LG  +  +     R++
Sbjct: 415 VCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESMAAFRIE 456



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 129/293 (44%), Gaps = 37/293 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGL 189
           L++G  ++GQLG+G+    +  PSPV+ L  E +       D +  ++S          +
Sbjct: 100 LSWGNGQNGQLGNGNETLSLSIPSPVQVLSDEDIIQVNASGDISAAVTS-------QGQI 152

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
             +G+   G+ ++  +   +  L       P  I A   +  V+VACG  H   V   G 
Sbjct: 153 YTWGKTRGGSLSQQKSLSRATNLLL-----PTLIVAPEVQ-FVQVACGKTHLAGVTKDGK 206

Query: 250 VYTWGFGGYGRLGHREQKDE------WVPRRVDVFQRNNV----LPPEAVISA--GSVNS 297
           + TWG    G+LGH  Q  +      + PR    +   N     L  + +I A  G  ++
Sbjct: 207 LITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKIIQASCGFQHT 266

Query: 298 SCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
           +C    G++Y WG  KN      N D    PK +  LS  N+  +D G  + F +  D +
Sbjct: 267 ACLTQDGEVYTWGFGKNGALGHGNWDQVDLPKKVEGLS--NIVKIDCGMDYTFALDKDGN 324

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVIVDR 402
             SWG  +YG+LG          +P ++ +  G  HV+ ++CG  HS  + D+
Sbjct: 325 IYSWGSNRYGQLGTTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDK 377



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 167/396 (42%), Gaps = 62/396 (15%)

Query: 44  LVSPTRLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           L  P+ ++ L   DI  V A+G +S    AV  +G+ YTWG+   G L     + R    
Sbjct: 119 LSIPSPVQVLSDEDIIQVNASGDISA---AVTSQGQIYTWGKTRGGSLSQQKSLSRATNL 175

Query: 103 IVSEL---SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG------------SGSI 147
           ++  L    + +  +   G++H   VT+DG  + +G    G+LG            S S 
Sbjct: 176 LLPTLIVAPEVQFVQVACGKTHLAGVTKDGKLITWGNPDQGKLGHNAQLQQESKNKSYSP 235

Query: 148 RNEIEPSPVRCL-----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
           R+  + + +  +       ++   +CG   T  L+  +   +   G  + G LGHG    
Sbjct: 236 RSYADYNAINFVGGALESKKIIQASCGFQHTACLT--QDGEVYTWGFGKNGALGHGN--- 290

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                      ++    P+ +  L+   IVK+ CG ++T A+D  G +Y+WG   YG+LG
Sbjct: 291 -----------WDQVDLPKKVEGLS--NIVKIDCGMDYTFALDKDGNIYSWGSNRYGQLG 337

Query: 263 HREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD--- 317
             +       VP ++ +   ++ +     IS G  +S+     G+ ++WG   N+G    
Sbjct: 338 TTQSNINKHNVPIQLQLPHGSSHVVD---ISCGEEHSAFLNDKGEAFIWG-YGNDGQLGH 393

Query: 318 ----DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
               +   PK L + +    R +  G     +        +G  + G+LG G   +  +A
Sbjct: 394 KEKTNLNQPKKL-EFTEPLRRVVCGGGHTGVITTAGKLFLFGRGRDGQLGRGDVNESMAA 452

Query: 374 M---PKK-VDILEGM--HVISVACGYGHSLVIVDRT 403
               PK+ V+I + +   V+ +A G  H L I  + 
Sbjct: 453 FRIEPKEVVNISQTLKAEVLEIALGSNHCLAIAAKN 488



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 13/171 (7%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           +K G +   GS  +  +G  +  ++ + V P +L+   G     V   C   H   ++ +
Sbjct: 320 DKDGNIYSWGSNRYGQLGTTQSNINKHNV-PIQLQLPHGSS-HVVDISCGEEHSAFLNDK 377

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G  + WG    GQLGH +K   ++P  + E ++  +++   G  HT V+T  G    FG 
Sbjct: 378 GEAFIWGYGNDGQLGHKEKTNLNQPKKL-EFTE-PLRRVVCGGGHTGVITTAGKLFLFGR 435

Query: 137 NKHGQLGSGSIRN-----EIEPSPV----RCLVSEVTATACGADFTVWLSS 178
            + GQLG G +        IEP  V    + L +EV   A G++  + +++
Sbjct: 436 GRDGQLGRGDVNESMAAFRIEPKEVVNISQTLKAEVLEIALGSNHCLAIAA 486


>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 1289

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 118/253 (46%), Gaps = 22/253 (8%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            C + H +A+   G  YTWG  E G+LGHGD   R  P  V  L +  +  A  G +HT 
Sbjct: 559 ACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVVSASCGGAHTA 618

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEG 181
           V+T  G+   FG  ++G+LG G  +    P P+      + ++   CG +FT  L     
Sbjct: 619 VLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALD--RQ 676

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL---AGETIVKVACGT 238
            S+   G    GQ G G    Y  +D  V         PR +  L   AG ++V VACG 
Sbjct: 677 GSVFTWGKTGEGQCGLG----YVDRDQVV---------PRCVDKLRDVAGSSVVDVACGY 723

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE-AVISAGSVNS 297
            HTV + + G +Y+WG G YG+LG  +   + +P RV +       P + A +  G+ +S
Sbjct: 724 THTVVLTASGELYSWGLGEYGQLGTGDVY-QPLPARVQLPADALCAPDQLARVYCGAFHS 782

Query: 298 SCTAGGGQLYMWG 310
             T     ++ WG
Sbjct: 783 IATTEQRVMFAWG 795



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 157/379 (41%), Gaps = 59/379 (15%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG------HGDKIQRDR------------P 101
            V   C   H + +   G  Y++G NE  ++       H   +  +             P
Sbjct: 479 IVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAP 538

Query: 102 TIVSELSKYK------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
            +V EL+  K      I     G  H++ +T+ G    +G  + G+LG G +R+   P  
Sbjct: 539 HLVEELALEKALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRK 598

Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           V  L+ E V + +CG   T  L++    S+   G  + G+LG G DN++  +D+      
Sbjct: 599 VMSLLRESVVSASCGGAHTAVLTA--KGSVFTFGRGRNGRLGLG-DNKW--RDT------ 647

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVP 272
              P P  +    G +I  V CG N T A+D +G V+TWG  G G+  LG+ + +D+ VP
Sbjct: 648 ---PHP-IVGFPQGTSISLVVCGWNFTAALDRQGSVFTWGKTGEGQCGLGYVD-RDQVVP 702

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD----DWMYPKPLMDL 328
           R VD   R+        ++ G  ++      G+LY WG L   G     D   P P    
Sbjct: 703 RCVDKL-RDVAGSSVVDVACGYTHTVVLTASGELYSWG-LGEYGQLGTGDVYQPLPARVQ 760

Query: 329 SGWNLRCMDSGNMHHFVGADSSC--------ISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
              +  C        + GA  S          +WG   YG  G G    K    P+++D 
Sbjct: 761 LPADALCAPDQLARVYCGAFHSIATTEQRVMFAWGLNSYGACGLGHTANKDK--PERIDC 818

Query: 381 LEGMHVISVACGYGHSLVI 399
                 + VACG+ +++ +
Sbjct: 819 FSSQTELVVACGHKYTIAL 837



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 20/189 (10%)

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           AL   TI  VACG  H++A+   G +YTWG G  GRLGH + +D  VPR+V    R    
Sbjct: 549 ALHRTTIAMVACGAQHSLAITDAGELYTWGSGEDGRLGHGDMRDRAVPRKVMSLLR---- 604

Query: 285 PPEAVISA--GSVNSSCTAGGGQLYMWGKLKNN----GDD-WM-YPKPLMDL-SGWNLRC 335
             E+V+SA  G  +++     G ++ +G+ +N     GD+ W   P P++    G ++  
Sbjct: 605 --ESVVSASCGGAHTAVLTAKGSVFTFGRGRNGRLGLGDNKWRDTPHPIVGFPQGTSISL 662

Query: 336 MDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE---GMHVISVAC 391
           +  G N    +    S  +WG    G+ G G Y  +   +P+ VD L    G  V+ VAC
Sbjct: 663 VVCGWNFTAALDRQGSVFTWGKTGEGQCGLG-YVDRDQVVPRCVDKLRDVAGSSVVDVAC 721

Query: 392 GYGHSLVIV 400
           GY H++V+ 
Sbjct: 722 GYTHTVVLT 730



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 88/193 (45%), Gaps = 31/193 (16%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKY---KIKKAGAGRSHTVVVT 126
           A+D +G  +TWG+   GQ G G  + RD+  P  V +L       +     G +HTVV+T
Sbjct: 672 ALDRQGSVFTWGKTGEGQCGLG-YVDRDQVVPRCVDKLRDVAGSSVVDVACGYTHTVVLT 730

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIE-----PSPVRCLVSEVTATACGADFTVWLSSVEG 181
             G   ++G  ++GQLG+G +   +      P+   C   ++    CGA  ++  ++ E 
Sbjct: 731 ASGELYSWGLGEYGQLGTGDVYQPLPARVQLPADALCAPDQLARVYCGAFHSI--ATTEQ 788

Query: 182 ASILNAGLPQYGQ--LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
             +   GL  YG   LGH  + +                +P  I   + +T + VACG  
Sbjct: 789 RVMFAWGLNSYGACGLGHTANKD----------------KPERIDCFSSQTELVVACGHK 832

Query: 240 HTVAVDSKGYVYT 252
           +T+A++    +YT
Sbjct: 833 YTIALEVNASLYT 845


>gi|21537357|gb|AAM61698.1| UVB-resistance protein-like [Arabidopsis thaliana]
          Length = 396

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 149/333 (44%), Gaps = 38/333 (11%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   +++  ++V  L  + ++    G  +++ + +DG    +GWN+ G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVW--LSSVEGASILNAGLPQYGQLGH 197
           LG     + E  PS V+ L + ++   A GA    W  L+  +       G  +YGQ G 
Sbjct: 70  LGHPPETKTESTPSLVKSLANVKIVQAAIGA----WHCLAVDDQGRAYAWGGNEYGQCG- 124

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
               E  +KD + +        P+  A     T+ +VA G  H+V +  +GYV+TWG   
Sbjct: 125 ----EEPSKDETGRPVRRDIVIPKRCAQQL--TVRQVAAGGTHSVVLTREGYVWTWG--- 175

Query: 258 YGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
                       W P   +++ V  R   L    +I+ G+ ++      G L+ WG  + 
Sbjct: 176 ----------QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEY 225

Query: 314 ---NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
                GD     YP P+  L    L  + +G  H   +  +     WG  ++G LG+G  
Sbjct: 226 GQLGTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDN 285

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            + S  +P+KV++L G  +I V+CG  HS+ + 
Sbjct: 286 DKSSKMLPQKVNLLPGEDIIQVSCGGTHSVALT 318



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 44/279 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQR 98
           +P+ ++ L   +++ V A   + HC+AVD +GR Y WG NE GQ G        G  ++R
Sbjct: 81  TPSLVKSLA--NVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           D         +  +++  AG +H+VV+T +G    + W        G I+    P  V+ 
Sbjct: 139 DIVIPKRCAQQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISVPVRVQG 194

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           L   V   A GA   + L   E  ++   G  +YGQLG G                + QP
Sbjct: 195 L-ENVRLIAVGAFHNLALK--EDGTLWAWGNNEYGQLGTG----------------DTQP 235

Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
           R  P  +  L   T+V +A G  H+ A+ ++G VY WG G +GRLG    ++  + +P++
Sbjct: 236 RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295

Query: 275 VDVFQRNNVLPPEAVI--SAGSVNSSCTAGGGQLYMWGK 311
           V      N+LP E +I  S G  +S      G+++ +G+
Sbjct: 296 V------NLLPGEDIIQVSCGGTHSVALTRDGRIFSFGR 328



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 161/382 (42%), Gaps = 62/382 (16%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYK 111
           L   ++R V  G  S + +A+  +G+ +TWG N+RG LGH  + + +  P++V  L+  K
Sbjct: 35  LEPFNVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVK 92

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
           I +A  G  H + V + G + A+G N++GQ G    ++E    PVR  +  V    C   
Sbjct: 93  IVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAQQ 149

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAI 223
            TV          + AG         GT +   T++  V    +  P         P  +
Sbjct: 150 LTV--------RQVAAG---------GTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRV 192

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L  E +  +A G  H +A+   G ++ WG   YG+LG  + +    P  V       +
Sbjct: 193 QGL--ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL 250

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRC 335
           +     I+AG  +S+     G++Y WG+ +        N+    M P+ +  L G ++  
Sbjct: 251 VD----IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDIIQ 306

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGMH------ 385
           +  G  H   +  D    S+G   +G LGYG     GQ    +P  +   EG        
Sbjct: 307 VSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE-LPIHIPPPEGRFNHTDEE 365

Query: 386 ------VISVACGYGHSLVIVD 401
                    VACG  H+L IV+
Sbjct: 366 DDGKWIAKHVACGGRHTLAIVE 387



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 56/273 (20%)

Query: 182 ASILNAGLPQYGQLGHGTDNE------------YNTKD----SSVKLAY----------- 214
            S++  G  + GQLG GTD E            +N +     S   LA            
Sbjct: 5   TSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64

Query: 215 ------------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                       + +  P  + +LA   IV+ A G  H +AVD +G  Y WG   YG+ G
Sbjct: 65  NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGAWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGGGQLYMWGKLKNN 315
               KDE   R V   +R+ V+P           ++AG  +S      G ++ WG+    
Sbjct: 125 EEPSKDE-TGRPV---RRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP 180

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM 374
           GD      P+      N+R +  G  H+  +  D +  +WG+ +YG+LG G    +S  +
Sbjct: 181 GDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI 240

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           P  V  L+ + ++ +A G  HS  +   TN GE
Sbjct: 241 P--VQGLDDLTLVDIAAGGWHSTAL---TNEGE 268



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 17/206 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L   ++R +A G    H +A+  +G  + WG NE GQLG GD   R  P  V  
Sbjct: 189 PVRVQGLE--NVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQG 244

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
           L    +    AG  H+  +T +G    +G  +HG+LG G     +++ P  V  L  E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLPGEDI 304

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +CG   +V L+      I + G   +G+LG+G      T    ++L     P     
Sbjct: 305 IQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIHIPPPEGRF 359

Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
                   G+ I K VACG  HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385


>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
          Length = 870

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 124/277 (44%), Gaps = 26/277 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           DI+ V   C   H +A+      + WG+N+ GQLG G D  ++  P ++  L      + 
Sbjct: 10  DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGIPFMQV 69

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L S+ +    CG D T 
Sbjct: 70  AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 129

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 130 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 172

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV--DVFQRNNVLPPEAVI 290
           +ACG  HT A V S G +Y++G GG G+LG     +   P  V  + F  N   PP+   
Sbjct: 173 IACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPDVDS 232

Query: 291 SAGSVNSSCTAGGGQLY-MWGKLKNNG--DDWMYPKP 324
                     +GG Q +  +   +N G  DD+  P P
Sbjct: 233 EEYFCVKRIFSGGDQSFSHYASPQNCGPPDDFRCPDP 269



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 54  SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 111

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 112 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 171

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 172 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 205



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 85/176 (48%), Gaps = 22/176 (12%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 5   IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 64

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 65  PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 106

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 107 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 162



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/188 (27%), Positives = 87/188 (46%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R I +L+   IV+VACG  H++A+     V+ WG   YG+LG   + K +  P+ +    
Sbjct: 3   RNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLI---- 58

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
           ++ +  P   ++AG  +S      G ++ WG+ K      N+ +D   P  L  L    +
Sbjct: 59  KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKI 118

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  +    ++G   YG+LG+     + +  P+KV  L G  V  +ACG
Sbjct: 119 VYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQIACG 176

Query: 393 YGHSLVIV 400
             H+   V
Sbjct: 177 RQHTSAFV 184


>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1451

 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 163/360 (45%), Gaps = 42/360 (11%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP ++  L GV    VA        +AV  +G  + WG N  GQLG G  IQR  PT VS
Sbjct: 191 SPAQVVGLTGV----VALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVS 246

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
           +L    +    AG  H + +  DG   A+G N  GQ+G G+  +   PSPV+ + S   A
Sbjct: 247 QLQ--GVSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTD--RPSPVQ-VTSIARA 301

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A  A     L  ++   +   GL   GQLG GT     T DS + +      R R + A
Sbjct: 302 KAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGT-----TADSPLPV------RVRGLGA 350

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
                +  +A GT H V + + G ++TWG G  G+LGH   +    P  V   + +NV  
Sbjct: 351 -----VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSERMLSPEVVT--RLSNV-- 401

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSG 339
             A +++GS +S      G ++ WG+  N   GD    +   P  +  LSG  +    SG
Sbjct: 402 --ASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVPGLSG-VVSVSASG 458

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +    + +D +   WG    G++G G    K  A P +V+ L    V ++A G  H + +
Sbjct: 459 HHSFALRSDGTVWGWGRNAQGQMGDGT--TKDRASPARVEGLS--SVKALASGGSHMVAL 514



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/353 (28%), Positives = 151/353 (42%), Gaps = 42/353 (11%)

Query: 38   GALDGNL---VSPTRLRPLVGVDI-RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
            G  DG L    + +R  P+    +   VA    + H +A+  +G  + WG N  GQLG G
Sbjct: 1130 GNADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDG 1189

Query: 94   DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
               +R  P  V  L K  +    AG  H++ V EDG   A+G+N  GQLG G++  +   
Sbjct: 1190 SNTRRTLPVQVVGLEK--VTAIAAGSYHSLAVREDGTVWAWGYNVFGQLGDGTM--DARA 1245

Query: 154  SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
             P R L  +      G ++   +   +G ++   G   +GQLG GT   +  + S  ++ 
Sbjct: 1246 VPTRMLGLDGAVAVAGGEYHSLMLRFDG-TLWATGNNSHGQLGEGT---FTNRLSPFQVV 1301

Query: 214  YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
               Q R              V  G  H+VA+   G V+TWG  G G+LG        VP 
Sbjct: 1302 ELDQVR-------------TVRAGGYHSVALREDGTVWTWGHNGQGQLGDGTVTTRRVPA 1348

Query: 274  RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPKPLMD 327
             V            A+ S G+  S   A G + + WG+  +     GD  D + P  +  
Sbjct: 1349 PVPGL--------TAIASVGAGTSHTFAVGSETWAWGRNSHGQLGTGDSSDRLEPTLVKG 1400

Query: 328  LSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
            L G     +  G+     GAD S +SWG   +G LG G  GQ++  +P  V +
Sbjct: 1401 LHGVK-SVLAGGDFSVAQGADGSAMSWGTNVHGTLGIGLPGQRT--VPGAVTL 1450



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 160/362 (44%), Gaps = 44/362 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++PT++  L GV    V AG    H +A+  +G  + WG N  GQ+G  D    DRP+ V
Sbjct: 240 LAPTQVSQLQGVSA--VTAGL--YHALALRSDGTVWAWGSNSSGQMG--DGTWTDRPSPV 293

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
              S  + K   A  + ++V+ +DG   A+G N  GQLG G+  +   P  VR L   VT
Sbjct: 294 QVTSIARAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTADSPLPVRVRGL-GAVT 352

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + A G    V L +    ++   G    GQLGHG+     + +   +L+           
Sbjct: 353 SLAAGTQHAVVLRA--DGTLWTWGHGATGQLGHGSSERMLSPEVVTRLS----------- 399

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
                 +  VA G+ H+VA  S G V+TWG    G+LG     +  +P RV        L
Sbjct: 400 -----NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTTTERHLPVRVP------GL 448

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDS 338
                +SA   +S      G ++ WG+      GD    D   P  +  LS  +++ + S
Sbjct: 449 SGVVSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEGLS--SVKALAS 506

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G  H   +  D +  +WG+   G+LG G    + +  P +V  L G  V SVA G   SL
Sbjct: 507 GGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRA--PVQVTGLSG--VTSVAAGAYFSL 562

Query: 398 VI 399
            +
Sbjct: 563 AL 564



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 159/360 (44%), Gaps = 44/360 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R+  L GV    V+      H  A+  +G  + WGRN +GQ+G G    R  P  V  
Sbjct: 442 PVRVPGLSGV----VSVSASGHHSFALRSDGTVWGWGRNAQGQMGDGTTKDRASPARVEG 497

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           LS   +K   +G SH V +  DG    +G+N  GQLG G+  +   P  V  L S VT+ 
Sbjct: 498 LSS--VKALASGGSHMVALRTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGL-SGVTSV 554

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A GA F++ L +    ++   G    GQLG G   +              +  P  +  L
Sbjct: 555 AAGAYFSLALRT--DGTVWAWGDGFEGQLGDGAGVQ--------------RASPVQVTGL 598

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               +VK+A G  H +AV   G V+ WG    G++G     D +  R V V+    V   
Sbjct: 599 --TRVVKLAAGAAHGLAVRDDGTVWAWGDNTEGQMGDGSWSDRF--RAVQVYGLTGV--- 651

Query: 287 EAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPK----PLMDLSGWNLRCMDSGN 340
            + +  G  +S   A  G L  WG       GD  + P+     +  LSG  ++ + +  
Sbjct: 652 -SSVVGGLYHSMALAQDGTLRAWGGNAYGQFGDGGVTPRVVAGAVPGLSG--IKLLGASY 708

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +H   V  D   ++WG+ ++G+LG G  G   S++P +V  L     +S   G  HSL++
Sbjct: 709 LHVLAVREDGMLLTWGYNRFGQLGLGAAGW--SSLPVQVRGLGQGRRLS--AGRAHSLLV 764



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 106/388 (27%), Positives = 151/388 (38%), Gaps = 78/388 (20%)

Query: 64   GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            G    H +AV  +G   TWG N  GQLG G       P  V  L + +  +  AGR+H++
Sbjct: 705  GASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGR--RLSAGRAHSL 762

Query: 124  VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA-------CGADFTVWL 176
            +V  DG  LA+G N  GQLG GS  +   P   R L     A+A          D TVW 
Sbjct: 763  LVRADGTVLAWGQNTSGQLGDGSTTHRASPVLARNLPCARAASAGRQHSLVLACDGTVW- 821

Query: 177  SSVEGASILNAGLPQYGQLGHG--TDNEYNTK--------------DSSVKLAYEA---- 216
                     + G    GQLG G  T   Y  K              DSS+ L  +     
Sbjct: 822  ---------SWGGNSQGQLGDGGVTSRAYPAKVEGLWGVVAVLAGGDSSMVLRADGTVWT 872

Query: 217  ----------------QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
                            +  P  +  LAG  I     G  H + V   G V+ WG  G G+
Sbjct: 873  WGANGSGQLGDGTLGDRASPLEVKGLAG--IATGVMGEAHALVVSQDGTVWAWGANGRGQ 930

Query: 261  LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDD 318
            LG         P RV        L     +S G   S      G ++ WG   +   GD 
Sbjct: 931  LGDGTTTSSASPVRV------AGLSAAMNVSVGQAYSLAVLPDGTVWSWGANDSGQLGDG 984

Query: 319  W----MYPKPLMDLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSS 372
                   PKP+ DL+  +++ + +G  HH V    D +   WG   +G++G G +  +  
Sbjct: 985  TNVARTTPKPVQDLA--DVKAVTAG-AHHVVAVRHDGTVWGWGANAFGQVGDGTHFWRF- 1040

Query: 373  AMPKKVDILEGMHVISVACGYGHSLVIV 400
              P +V+ L  ++ +  + G  HSL ++
Sbjct: 1041 -RPVRVEGL--LNAVETSAGEQHSLALL 1065



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 110/399 (27%), Positives = 164/399 (41%), Gaps = 63/399 (15%)

Query: 22   LLFCGSTCWDAVGRRKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            +L C  T W   G  +G L DG + S   P ++  L GV +  +A G  S   + +  +G
Sbjct: 813  VLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGLWGV-VAVLAGGDSS---MVLRADG 868

Query: 78   RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
              +TWG N  GQLG G    R  P  V  L+   I     G +H +VV++DG   A+G N
Sbjct: 869  TVWTWGANGSGQLGDGTLGDRASPLEVKGLAG--IATGVMGEAHALVVSQDGTVWAWGAN 926

Query: 138  KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
              GQLG G+  +   P  V  L S     + G  ++  L+ +   ++ + G    GQLG 
Sbjct: 927  GRGQLGDGTTTSSASPVRVAGL-SAAMNVSVGQAYS--LAVLPDGTVWSWGANDSGQLGD 983

Query: 198  GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
            GT+               A+  P+ +  LA   +  V  G +H VAV   G V+ WG   
Sbjct: 984  GTN--------------VARTTPKPVQDLA--DVKAVTAGAHHVVAVRHDGTVWGWGANA 1027

Query: 258  YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNN 315
            +G++G       + P RV+       L      SAG  +S    G  +   WG  +    
Sbjct: 1028 FGQVGDGTHFWRFRPVRVE------GLLNAVETSAGEQHSLALLGDERALSWGSHEYGQL 1081

Query: 316  GDDWMYPK---------------PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
            GD    P                P + +S W+            + AD +  +WG    G
Sbjct: 1082 GDAESGPSLEPVGVKLPSSKVLVPAVSVSAWHQHAA-------ALLADGTVQTWGGNADG 1134

Query: 361  ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +LG G    +S A P  V  L  M  ++VA    H+L +
Sbjct: 1135 QLGDGT--TESRATPITVAGLGAM--VAVAPAARHTLAL 1169



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 148/337 (43%), Gaps = 31/337 (9%)

Query: 68   CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
             + +AV  +G  ++WG N+ GQLG G  + R  P  V +L+  K   AGA   H V V  
Sbjct: 959  AYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLADVKAVTAGA--HHVVAVRH 1016

Query: 128  DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
            DG    +G N  GQ+G G+      P  V  L++ V  T+ G   ++ L   E A  L+ 
Sbjct: 1017 DGTVWGWGANAFGQVGDGTHFWRFRPVRVEGLLNAVE-TSAGEQHSLALLGDERA--LSW 1073

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            G  +YGQLG   ++  + +   VKL     P  + +        V V+    H  A+ + 
Sbjct: 1074 GSHEYGQLGD-AESGPSLEPVGVKL-----PSSKVLVP-----AVSVSAWHQHAAALLAD 1122

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G V TWG    G+LG    +    P  V        + P A       ++      G ++
Sbjct: 1123 GTVQTWGGNADGQLGDGTTESRATPITVAGLGAMVAVAPAA------RHTLALRSDGTVW 1176

Query: 308  MWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
             WG        +G +     P+  +    +  + +G+ H   V  D +  +WG+  +G+L
Sbjct: 1177 AWGDNTFGQLGDGSNTRRTLPVQVVGLEKVTAIAAGSYHSLAVREDGTVWAWGYNVFGQL 1236

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            G G     + A+P ++  L+G   ++VA G  HSL++
Sbjct: 1237 GDGTM--DARAVPTRMLGLDG--AVAVAGGEYHSLML 1269



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 146/355 (41%), Gaps = 59/355 (16%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGR 119
           VAAG    H + V   G  + WG N  GQLG G    QR     V  L+   +    AG 
Sbjct: 53  VAAGA--QHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGLTD--VTSIAAGD 108

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------AD 171
           +H++ +  D     +G N  GQ+G G+  +   P  V  L S+V A A G        AD
Sbjct: 109 AHSLALRADRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGL-SDVVAVAAGEFHSLALRAD 167

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            TVW            G   YGQLG G                +  P P  +  L G  +
Sbjct: 168 GTVWA----------WGSNFYGQLGRGHS--------------QPGPSPAQVVGLTG--V 201

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           V +A G + ++AV S G V+ WG  G G+LG         P +V   Q        + ++
Sbjct: 202 VALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVSQLQ------GVSAVT 255

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GD-DWM-YPKPLMDLSGWNLRCM---DSGNMHHF 344
           AG  ++      G ++ WG   +   GD  W   P P+   S    + +   D+G++   
Sbjct: 256 AGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDRPSPVQVTSIARAKAVAAQDAGSL--V 313

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +  D    +WG    G+LG G      S +P +V  L    V S+A G  H++V+
Sbjct: 314 LLDDGGVFAWGLNSQGQLGIGT--TADSPLPVRVRGLGA--VTSLAAGTQHAVVL 364



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 127/315 (40%), Gaps = 48/315 (15%)

Query: 62   AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
            AA     H + +  +G  ++WG N +GQLG G    R  P  V  L  + +    AG   
Sbjct: 803  AASAGRQHSLVLACDGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGL--WGVVAVLAGGDS 860

Query: 122  TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-------VSEVTATACGADFTV 174
            ++V+  DG    +G N  GQLG G++ +   P  V+ L       + E  A     D TV
Sbjct: 861  SMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQDGTV 920

Query: 175  WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            W     G           GQLG GT     T  +S          P  +A L+    + V
Sbjct: 921  WAWGANG----------RGQLGDGT----TTSSAS----------PVRVAGLS--AAMNV 954

Query: 235  ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            + G  +++AV   G V++WG    G+LG         P+ V        L     ++AG+
Sbjct: 955  SVGQAYSLAVLPDGTVWSWGANDSGQLGDGTNVARTTPKPV------QDLADVKAVTAGA 1008

Query: 295  VNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
             +       G ++ W     G++ +    W + +P+      N     +G  H   +  D
Sbjct: 1009 HHVVAVRHDGTVWGWGANAFGQVGDGTHFWRF-RPVRVEGLLNAVETSAGEQHSLALLGD 1067

Query: 349  SSCISWGHAQYGELG 363
               +SWG  +YG+LG
Sbjct: 1068 ERALSWGSHEYGQLG 1082



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 81/320 (25%), Positives = 132/320 (41%), Gaps = 53/320 (16%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P   S+       K  AG  H++ VT+ G   A+G N  GQLG+GS+  +   +     +
Sbjct: 39  PAARSQALASATSKVAAGAQHSLYVTQAGTVWAWGGNGSGQLGTGSVSFQRVVAQQVPGL 98

Query: 161 SEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
           ++VT+ A G        AD TVW            G    GQ+G GT+ +          
Sbjct: 99  TDVTSIAAGDAHSLALRADRTVW----------TWGGNNAGQVGDGTNVD---------- 138

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
               +P P+ +  L+   +V VA G  H++A+ + G V+ WG   YG+LG    +    P
Sbjct: 139 ----RPTPQKVPGLS--DVVAVAAGEFHSLALRADGTVWAWGSNFYGQLGRGHSQPG--P 190

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLM 326
               V     V+     ++AG   S      G ++ WG   +   GD      + P  + 
Sbjct: 191 SPAQVVGLTGVV----ALAAGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQRLAPTQVS 246

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G  H   + +D +  +WG    G++G G +  +    P  V +     
Sbjct: 247 QLQG--VSAVTAGLYHALALRSDGTVWAWGSNSSGQMGDGTWTDR----PSPVQVTSIAR 300

Query: 386 VISVACGYGHSLVIVDRTNV 405
             +VA     SLV++D   V
Sbjct: 301 AKAVAAQDAGSLVLLDDGGV 320


>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
           stuttgartiensis]
          Length = 1413

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 151/337 (44%), Gaps = 38/337 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H + +  +G  + +G N   QLG G       P  VS L+   I  AG G  HT+ +  D
Sbjct: 602 HTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTD-AIAIAG-GVYHTIALKSD 659

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G    +GWN  GQLG G+  N   P  V  L ++V A A G   T+ L S    ++   G
Sbjct: 660 GTVWTWGWNNSGQLGDGTTINRSTPVQVIGL-TDVIAIAGGDYHTIALKS--DGTVWTWG 716

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              YGQLG G              A   +  P  +  LA   I+ +A G  H++A+ S G
Sbjct: 717 FNYYGQLGGG--------------ATTNRSTPVQVKGLA--DIIAIAGGYVHSIALKSDG 760

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG+ GYG+LG     D   P +V      + L     I+ G +++      G ++ 
Sbjct: 761 TVWAWGYNGYGQLGDGSTTDHLTPVQV------SGLTDIIAIAGGYIHTIALKSDGTVWA 814

Query: 309 WGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGEL 362
           WG  +     +G       P+  +SG       +  ++H +   +D +  +WG   YG+L
Sbjct: 815 WGHNEGGQLGDGTTTNSSTPVQ-VSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQL 873

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G G   ++S  +P  V ++    VI++A GY H++ +
Sbjct: 874 GDGSTTERS--LP--VQVIGLTDVIAIAGGYYHTIAL 906



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 111/231 (48%), Gaps = 23/231 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  +A G  + H +A+  +G  + WG NE GQLG G    R  P  VS L+   I  AG
Sbjct: 294 DVIAIAGG--NAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKVSGLADV-IAIAG 350

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
            G SHT+V+  DG    +G N+ GQLG GS  N   P  V  L ++V A A G   T+ +
Sbjct: 351 -GYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQVSGL-ADVIAIAGGVYHTIAV 408

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            S    ++   G   YGQLG GT     T +SS          P  +  L    ++ +A 
Sbjct: 409 KS--DGTMWAWGYNWYGQLGDGT-----TINSST---------PVQVNGL--TDVIAIAG 450

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
           G  HT+A+ S G V+TWGF  YG+LG     +   P +  +    +V  P 
Sbjct: 451 GYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPT 501



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 111/263 (42%), Gaps = 39/263 (14%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G+  G    N  +P +++ L   DI  +A G V  H +A+  +G  + WG N  GQLG G
Sbjct: 721 GQLGGGATTNRSTPVQVKGLA--DIIAIAGGYV--HSIALKSDGTVWAWGYNGYGQLGDG 776

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                  P  VS L+   I     G  HT+ +  DG   A+G N+ GQLG G+  N   P
Sbjct: 777 STTDHLTPVQVSGLTD--IIAIAGGYIHTIALKSDGTVWAWGHNEGGQLGDGTTTNSSTP 834

Query: 154 SPVRCLVSEVTATA-------CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
             V  L   +  TA         +D TVW            G   YGQLG G+  E    
Sbjct: 835 VQVSGLTDVIAVTARLYHTIALKSDGTVW----------TWGRNIYGQLGDGSTTE---- 880

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                       R   +  +    ++ +A G  HT+A+ S G V+ WG+ G  +LG+   
Sbjct: 881 ------------RSLPVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWGYNGNNQLGNWST 928

Query: 267 KDEWVPRRVDVFQRNNVLPPEAV 289
           K+   P R   +  N+V  P  +
Sbjct: 929 KNSSTPVRSLRYDMNSVTTPAVI 951



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 153/337 (45%), Gaps = 38/337 (11%)

Query: 69   HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            H + +  +G  +  G N  GQLG G  I R  P  VS L+   I  AG G  HT+ +  D
Sbjct: 1050 HTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGLTDV-IAIAG-GDYHTIALKSD 1107

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
                A+G N +GQLG G+I N   P+PV  L + + A A G   T+ L S    ++   G
Sbjct: 1108 NTVWAWGSNSYGQLGDGTITNRSIPTPVTYL-TNIIAIAGGYVHTIALKS--DGTVWAWG 1164

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               YGQLG G+    +T      L          + A+AGE +        HTVA+ S G
Sbjct: 1165 YNGYGQLGDGSTTNRSTPVQVSGL--------TDVIAIAGEYV--------HTVALKSDG 1208

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             V+ WG+ GYG+LG     +   P +V      + L     I+ G V++      G ++ 
Sbjct: 1209 TVWAWGYNGYGQLGDGSTTNRSTPVQV------SGLTDVIAIAGGYVHTIALKSDGTVWT 1262

Query: 309  WGKLKNNGD--DWMYPKPL--MDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGEL 362
            WG   N+G   D      L  + +SG       +G  +H +   +D++  +WG   YG+L
Sbjct: 1263 WG-WNNSGQLGDGTTINRLTPVQVSGLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQL 1321

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            G G    + +  P +V  L     I++A G  H++ +
Sbjct: 1322 GDGTTINRLT--PVQVSGLT--DAIAIAGGDYHTIAL 1354



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 158/356 (44%), Gaps = 38/356 (10%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +P ++  L   D+  +A G    H +A+  +G  + WG NE GQLG G    R  P 
Sbjct: 182 NRSTPVQVSGLT--DVIAIAGGAY--HTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPV 237

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            VS L+   I  AG G +HT+ +  DG   A+G N+ G+LG GS  N   P  V  L S+
Sbjct: 238 QVSGLTDV-IAIAG-GYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGL-SD 294

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V A A G   T+ L S    ++   G  + GQLG G+    +T              P  
Sbjct: 295 VIAIAGGNAHTIALKS--DGTVWAWGDNEGGQLGDGSTTNRST--------------PVK 338

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           ++ LA   ++ +A G +HT+ + S G V+TWG    G+LG     +   P +V      +
Sbjct: 339 VSGLA--DVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQV------S 390

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
            L     I+ G  ++      G ++ WG        +G       P+  ++G       +
Sbjct: 391 GLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTINSSTPVQ-VNGLTDVIAIA 449

Query: 339 GNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
           G  +H +   +D +  +WG   YG+LG G    +S+   + +  ++ +   +V  G
Sbjct: 450 GGYYHTIAMKSDGAVWTWGFNYYGQLGDGSITNRSTPAQRSLSGMKSVATPTVTTG 505



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 142/327 (43%), Gaps = 38/327 (11%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N  +P ++  L   D+  +A G    H +A+  +   + WG N  GQLG G    R  PT
Sbjct: 1078 NRSTPVQVSGLT--DVIAIAGG--DYHTIALKSDNTVWAWGSNSYGQLGDGTITNRSIPT 1133

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
             V+ L+   I     G  HT+ +  DG   A+G+N +GQLG GS  N   P  V  L ++
Sbjct: 1134 PVTYLTN--IIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGL-TD 1190

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            V A A     TV L S    ++   G   YGQLG G+    +T              P  
Sbjct: 1191 VIAIAGEYVHTVALKS--DGTVWAWGYNGYGQLGDGSTTNRST--------------PVQ 1234

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ++ L    ++ +A G  HT+A+ S G V+TWG+   G+LG     +   P +V      +
Sbjct: 1235 VSGL--TDVIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQV------S 1286

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDS 338
             L     I+ G  ++        ++ WG        +G       P+  +SG       +
Sbjct: 1287 GLTDAIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTINRLTPVQ-VSGLTDAIAIA 1345

Query: 339  GNMHHFVG--ADSSCISWGHAQYGELG 363
            G  +H +   +D++  +WG   YG+LG
Sbjct: 1346 GGDYHTIALKSDNTVWAWGSNSYGQLG 1372



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 161/354 (45%), Gaps = 41/354 (11%)

Query: 55  GVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           G +  F+    +S    H + +  +G  +TWG N  GQLG      R  P  VS L+   
Sbjct: 137 GSETTFIPRSQISAGAYHTLTLKPDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTDV- 195

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
           I  AG G  HT+ +  DG   A+G N+ GQLG GS  +   P  V  L ++V A A G  
Sbjct: 196 IAIAG-GAYHTIALKSDGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGL-TDVIAIAGGYA 253

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            T+ L S    ++   G  + G+LG G     +T + S+         P  +  L+   +
Sbjct: 254 HTIALKS--DGTVWAWGDNEGGRLGDG-----STTNRSI---------PVKVGGLS--DV 295

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           + +A G  HT+A+ S G V+ WG    G+LG     +   P +V      + L     I+
Sbjct: 296 IAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRSTPVKV------SGLADVIAIA 349

Query: 292 AGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG- 346
            G  ++      G ++ WG  +     +G       P+  +SG       +G ++H +  
Sbjct: 350 GGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTTNRSTPVQ-VSGLADVIAIAGGVYHTIAV 408

Query: 347 -ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +D +  +WG+  YG+LG G     +S+ P +V+ L    VI++A GY H++ +
Sbjct: 409 KSDGTMWAWGYNWYGQLGDGT--TINSSTPVQVNGLT--DVIAIAGGYYHTIAM 458



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 109/249 (43%), Gaps = 38/249 (15%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N  +P ++  L   D+  +A   V  H VA+  +G  + WG N  GQLG G    R  P 
Sbjct: 1178 NRSTPVQVSGLT--DVIAIAGEYV--HTVALKSDGTVWAWGYNGYGQLGDGSTTNRSTPV 1233

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
             VS L+   I  AG G  HT+ +  DG    +GWN  GQLG G+  N + P  V  L   
Sbjct: 1234 QVSGLTDV-IAIAG-GYVHTIALKSDGTVWTWGWNNSGQLGDGTTINRLTPVQVSGLTDA 1291

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            + A A G   T+ L S    ++   G   YGQLG GT                 +  P  
Sbjct: 1292 I-AIAGGDYHTIALKSDN--TVWAWGSNSYGQLGDGTTIN--------------RLTPVQ 1334

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            ++ L     + +A G  HT+A+ S   V+ WG   YG+LG             DV   N+
Sbjct: 1335 VSGLTDA--IAIAGGDYHTIALKSDNTVWAWGSNSYGQLG-------------DVSTANS 1379

Query: 283  VLPPEAVIS 291
            + P + ++S
Sbjct: 1380 LTPAQCLLS 1388



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 128/302 (42%), Gaps = 38/302 (12%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           SE +     +  AG  HT+ +  DG   A+G N + QLG GS  +   P  V  L   + 
Sbjct: 586 SETTFMPRTQISAGAYHTLTLKPDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTDAI- 644

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G   T+ L S    ++   G    GQLG GT                   R   + 
Sbjct: 645 AIAGGVYHTIALKS--DGTVWTWGWNNSGQLGDGTTIN----------------RSTPVQ 686

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            +    ++ +A G  HT+A+ S G V+TWGF  YG+LG     +   P +V        L
Sbjct: 687 VIGLTDVIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRSTPVQV------KGL 740

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGD----DWMYPKPLMDLSGWNLRCMDS 338
                I+ G V+S      G ++ WG       GD    D + P  +  L+  ++  +  
Sbjct: 741 ADIIAIAGGYVHSIALKSDGTVWAWGYNGYGQLGDGSTTDHLTPVQVSGLT--DIIAIAG 798

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G +H   + +D +  +WGH + G+LG G     +S+ P +V  L    VI+V     H++
Sbjct: 799 GYIHTIALKSDGTVWAWGHNEGGQLGDGT--TTNSSTPVQVSGLT--DVIAVTARLYHTI 854

Query: 398 VI 399
            +
Sbjct: 855 AL 856



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 152/363 (41%), Gaps = 44/363 (12%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            N  +P ++  L  V    +A      H +A+  +G  +TWGRN  GQLG G   +R  P 
Sbjct: 830  NSSTPVQVSGLTDV----IAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGSTTERSLPV 885

Query: 103  IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
             V  L+   I  AG G  HT+ +  DG   A+G+N + QLG+ S +N    +PVR L  +
Sbjct: 886  QVIGLTDV-IAIAG-GYYHTIALKSDGAVWAWGYNGNNQLGNWSTKNS--STPVRSLRYD 941

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            + +    A  T   + V  +S+L  G     +       +Y T                 
Sbjct: 942  MNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTAWFDYGTS---------------- 985

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
             + +  +T   + CGT+      + G +  W    Y R+  +         R   +    
Sbjct: 986  -SGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYY-RIAAQNS-------RGISYGSET 1036

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
            +  P + ISAG+ ++      G ++     W     +G       P+  +SG       +
Sbjct: 1037 IFLPRSQISAGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQ-VSGLTDVIAIA 1095

Query: 339  GNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            G  +H +   +D++  +WG   YG+LG G    +S  +P  V  L   ++I++A GY H+
Sbjct: 1096 GGDYHTIALKSDNTVWAWGSNSYGQLGDGTITNRS--IPTPVTYLT--NIIAIAGGYVHT 1151

Query: 397  LVI 399
            + +
Sbjct: 1152 IAL 1154



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 111/283 (39%), Gaps = 74/283 (26%)

Query: 117  AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
            AG  HT+ +  DG   A G N +GQLG G+  N   P  V  L ++V A A G   T+ L
Sbjct: 1046 AGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRSTPVQVSGL-TDVIAIAGGDYHTIAL 1104

Query: 177  SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
             S    ++   G   YGQLG GT            +   + P P          I+ +A 
Sbjct: 1105 KSDN--TVWAWGSNSYGQLGDGT------------ITNRSIPTPVTYL----TNIIAIAG 1146

Query: 237  GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
            G  HT+A+ S G V+ WG+ GYG+LG     +   P +V        +  E V +     
Sbjct: 1147 GYVHTIALKSDGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTDVIAIAGEYVHTV---- 1202

Query: 297  SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGH 356
                           LK++G  W                                 +WG+
Sbjct: 1203 --------------ALKSDGTVW---------------------------------AWGY 1215

Query: 357  AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              YG+LG G    +S+  P +V  L    VI++A GY H++ +
Sbjct: 1216 NGYGQLGDGSTTNRST--PVQVSGLT--DVIAIAGGYVHTIAL 1254



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 30   WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
            W+  G+       N ++P ++  L   D   +A G    H +A+  +   + WG N  GQ
Sbjct: 1265 WNNSGQLGDGTTINRLTPVQVSGLT--DAIAIAGG--DYHTIALKSDNTVWAWGSNSYGQ 1320

Query: 90   LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
            LG G  I R  P  VS L+   I  AG G  HT+ +  D    A+G N +GQLG  S  N
Sbjct: 1321 LGDGTTINRLTPVQVSGLTD-AIAIAG-GDYHTIALKSDNTVWAWGSNSYGQLGDVSTAN 1378

Query: 150  EIEPSPVRCLVSEVTATACGADF 172
             +  +P +CL+S + +T    + 
Sbjct: 1379 SL--TPAQCLLSPIVSTGTAINI 1399


>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
           harrisii]
          Length = 531

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 138/296 (46%), Gaps = 26/296 (8%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G      + + + P +L  L G  I+ ++ G    H +    +G  Y
Sbjct: 42  EVFVFGLNCSNCLGTGD---NQSTIVPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVY 97

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P  + + L   ++ +   G  H++ +  DG   A+G+N  
Sbjct: 98  AWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC 157

Query: 140 GQLGSGSIRNEIEPSPV-RCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSGS  N+  P  V  CL +  V + ACG   T  ++ ++   +   G    GQLG 
Sbjct: 158 GQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGL 215

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +                Q  P  +AAL    ++++ CG  HT+A+  +G +Y WG   
Sbjct: 216 GNNGN--------------QLTPCRVAALHSVCVLQIVCGYAHTLALTDEGLLYAWGANT 261

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           YG+LG   + +   P ++ V ++  V+   A  SA +  S+    GG +YMWG+ +
Sbjct: 262 YGQLGTGNKSNLLSPAQIMV-EKERVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT       FG N    LG+G  ++ I P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEAIYVTHSDEVFVFGLNCSNCLGTGDNQSTIVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+ + G VY WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V+S   G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G KS+ +     ++E   V+
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKSNLLSPAQIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297


>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
           magnipapillata]
          Length = 896

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 123/285 (43%), Gaps = 38/285 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N   P R+  L    I+ V+  C   H +A+  EG  Y+WG NE GQLG GD   R RP 
Sbjct: 482 NTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYRPV 540

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
           +++ +S  +I     G  HT+ +T D    ++GW  HGQLG  S+ N++ P  +  L S 
Sbjct: 541 LITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSH 600

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +V   A G   +  L+S        A L  YGQLG G+              +  Q  P+
Sbjct: 601 KVIQAAAGYAHSAVLTSQRYVYTFGADL--YGQLGIGS--------------HYKQVIPQ 644

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWG-------------FGGYGRLGHREQKD 268
            + +L  ++I  ++CG   T+A+     ++ WG                YGR      KD
Sbjct: 645 LVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKD 704

Query: 269 ---EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
               + P  +  FQ  +   P   I  G+ +        Q+Y WG
Sbjct: 705 LNHRFYPETLQ-FQLQH---PITQIFCGNWHYIILTSVNQVYTWG 745



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 117/268 (43%), Gaps = 8/268 (2%)

Query: 48  TRLRPLVGVDI---RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           TR RP++   I   + V+  C + H +A+  + + Y+WG    GQLG      +  P  +
Sbjct: 535 TRYRPVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQI 594

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
             L  +K+ +A AG +H+ V+T       FG + +GQLG GS   ++ P  V  L +  +
Sbjct: 595 DLLDSHKVIQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSI 654

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +CG   T+ +S  +          Q+        ++Y  K +S       +  P  +
Sbjct: 655 YLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKDLNHRFYPETL 714

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  I ++ CG  H + + S   VYTWG+   G+LGH  + D+  PR V    R  +
Sbjct: 715 QFQLQHPITQIFCGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAI 774

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           +     ++ G+  S        +  WG+
Sbjct: 775 IG----VAVGAEFSVAFDADDNIMAWGR 798



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 94/201 (46%), Gaps = 28/201 (13%)

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGA 170
           +   GR+H   VT   N   + W K       +++N   P  +  L ++   V + ACG 
Sbjct: 449 RIACGRNHIAFVT--NNKELYTWGKECGGRKDNVQNTCLPMRMENLHNQGIQVVSVACGE 506

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             T+ L   EG  + + G  +YGQLG G T   Y               RP  I  ++ +
Sbjct: 507 FHTIALCE-EG--VYSWGSNEYGQLGVGDTRTRY---------------RPVLITHISSK 548

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            IV V CG  HT+A+ S   VY+WG+G +G+LG +  +++  P+++D+   + V+     
Sbjct: 549 QIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKVIQA--- 605

Query: 290 ISAGSVNSSCTAGGGQLYMWG 310
            +AG  +S+       +Y +G
Sbjct: 606 -AAGYAHSAVLTSQRYVYTFG 625



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 35/237 (14%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N ++P ++  L    +   AAG    H   +  +   YT+G +  GQLG G   ++  P 
Sbjct: 587 NQLTPKQIDLLDSHKVIQAAAG--YAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQ 644

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG--------------QLGSGS-- 146
           +V  L+   I     G   T+ ++ED     +G N H               ++ S +  
Sbjct: 645 LVDSLTLDSIYLISCGPFETIAISEDQTIFCWGRNYHQFYICAKAESSKYGRKMASNTKD 704

Query: 147 IRNEIEPSPVRC-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           + +   P  ++  L   +T   CG    + L+SV    +   G    GQLGH     YN 
Sbjct: 705 LNHRFYPETLQFQLQHPITQIFCGNWHYIILTSVN--QVYTWGYNDCGQLGH-----YNK 757

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            D         Q  PR + AL    I+ VA G   +VA D+   +  WG    G++G
Sbjct: 758 ID---------QSAPRLVKALIRRAIIGVAVGAEFSVAFDADDNIMAWGRNDEGKIG 805



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 3/86 (3%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C + H + +    + YTWG N+ GQLGH +KI +  P +V  L +  I     G   +V 
Sbjct: 727 CGNWHYIILTSVNQVYTWGYNDCGQLGHYNKIDQSAPRLVKALIRRAIIGVAVGAEFSVA 786

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNE 150
              D N +A+G N  G++G   I NE
Sbjct: 787 FDADDNIMAWGRNDEGKIG---IENE 809



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 26/205 (12%)

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           SS  L + + PR R            +ACG NH   V +   +YTWG    GR  + +  
Sbjct: 436 SSNDLLFTSTPRAR------------IACGRNHIAFVTNNKELYTWGKECGGRKDNVQ-- 481

Query: 268 DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPK 323
           +  +P R++      +             + C  G   +Y WG  +      GD     +
Sbjct: 482 NTCLPMRMENLHNQGIQVVSVACGEFHTIALCEEG---VYSWGSNEYGQLGVGDTRTRYR 538

Query: 324 PLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           P++   +S   +  +  G  H   + +D    SWG   +G+LG      ++   PK++D+
Sbjct: 539 PVLITHISSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLK--SVENQLTPKQIDL 596

Query: 381 LEGMHVISVACGYGHSLVIVDRTNV 405
           L+   VI  A GY HS V+  +  V
Sbjct: 597 LDSHKVIQAAAGYAHSAVLTSQRYV 621


>gi|405954062|gb|EKC21598.1| Putative E3 ubiquitin-protein ligase HERC4 [Crassostrea gigas]
          Length = 1059

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/335 (26%), Positives = 155/335 (46%), Gaps = 35/335 (10%)

Query: 80  YTWGRNERGQL--GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + WGR+  GQL  G  ++     P  VS L +  IK+   G  HT++VT+DG   + G N
Sbjct: 5   FGWGRSNDGQLSIGFSEETSILSPKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSN 64

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-----EVTATACGADFTVWLSSVEGASILNAGLPQY 192
           ++G+LG    R+      V  LVS     +V   A G++F++ +++     + + G    
Sbjct: 65  EYGELGHSKPRSRAVSIDVVELVSSLSSMQVIQAAGGSEFSLVITT--AGEVFSWGRNDK 122

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG G            KL+ E + +P+ + +LA  T+V++ CG NH +A+   G +++
Sbjct: 123 GQLGRG------------KLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFS 170

Query: 253 WGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           WG   YG+LG          P+++   +      P A I++G  +S        ++ WGK
Sbjct: 171 WGCNKYGQLGLGSSHSFHDTPQQIVCLRG----IPIAQIASGGNHSFILTWSRAVFGWGK 226

Query: 312 LK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
                   N+  D  +P     L    +  +  G  H   +  +    S+G   +G+LG+
Sbjct: 227 NSFGQLGLNDEYDKSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGH 286

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                ++  +PK+V  L G  +  VACG  H++  
Sbjct: 287 N--STQNEILPKRVMELMGSVISQVACGRRHTVAF 319



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 133/265 (50%), Gaps = 27/265 (10%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G+L  CGS  +  +G  K       +    L   +   ++ + A   S   + +   G
Sbjct: 54  KDGKLYSCGSNEYGELGHSKPRSRAVSIDVVELVSSLS-SMQVIQAAGGSEFSLVITTAG 112

Query: 78  RCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             ++WGRN++GQLG G   K +  +P ++  L+   + +   G +H + +T+DG   ++G
Sbjct: 113 EVFSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLALTDDGRLFSWG 172

Query: 136 WNKHGQLGSGSIRNEIE-PSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLP 190
            NK+GQLG GS  +  + P  + CL    ++++ +    +    W  +V G      G  
Sbjct: 173 CNKYGQLGLGSSHSFHDTPQQIVCLRGIPIAQIASGGNHSFILTWSRAVFGW-----GKN 227

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            +GQLG   ++EY+            +  P    +L  + ++ ++CG +HTVA+  +G V
Sbjct: 228 SFGQLG--LNDEYD------------KSHPTLCKSLRNQKVMYISCGEDHTVALTKEGGV 273

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRV 275
           +++G GG+G+LGH   ++E +P+RV
Sbjct: 274 FSFGAGGFGQLGHNSTQNEILPKRV 298



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 67/137 (48%), Gaps = 3/137 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P ++  L G+ I  +A+G    H   +      + WG+N  GQLG  D+  +  PT+  
Sbjct: 190 TPQQIVCLRGIPIAQIASG--GNHSFILTWSRAVFGWGKNSFGQLGLNDEYDKSHPTLCK 247

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HTV +T++G   +FG    GQLG  S +NEI P  V  L+ S ++
Sbjct: 248 SLRNQKVMYISCGEDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVMELMGSVIS 307

Query: 165 ATACGADFTVWLSSVEG 181
             ACG   TV  S   G
Sbjct: 308 QVACGRRHTVAFSPSSG 324



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 70/182 (38%), Gaps = 45/182 (24%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ ++ L    I +++CG  HT+ V   G +Y+ G   YG LGH + +   V   +DV +
Sbjct: 28  PKEVSRLQELDIKEISCGEKHTLIVTKDGKLYSCGSNEYGELGHSKPRSRAV--SIDVVE 85

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
             + L    VI A        AGG                         S ++L    +G
Sbjct: 86  LVSSLSSMQVIQA--------AGG-------------------------SEFSLVITTAG 112

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +           SWG    G+LG G   ++    PK +  L    V+ + CG  H L +
Sbjct: 113 EV----------FSWGRNDKGQLGRGKLSKEEERKPKLMKSLAVCTVVQITCGANHCLAL 162

Query: 400 VD 401
            D
Sbjct: 163 TD 164



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 48/111 (43%), Gaps = 3/111 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT  + L    + +++ G    H VA+  EG  +++G    GQLGH        P  V E
Sbjct: 243 PTLCKSLRNQKVMYISCG--EDHTVALTKEGGVFSFGAGGFGQLGHNSTQNEILPKRVME 300

Query: 107 LSKYKIKKAGAGRSHTVVVT-EDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           L    I +   GR HTV  +   G   AFG    GQLG G       P P+
Sbjct: 301 LMGSVISQVACGRRHTVAFSPSSGKMYAFGSGGSGQLGLGDTSARNSPFPI 351


>gi|158286476|ref|XP_308776.4| AGAP006994-PA [Anopheles gambiae str. PEST]
 gi|157020486|gb|EAA04764.5| AGAP006994-PA [Anopheles gambiae str. PEST]
          Length = 1055

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 147/333 (44%), Gaps = 33/333 (9%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    G+LG G  ++ Q   P  +      ++ +   G SHT+ +T++G   A G N
Sbjct: 4   YCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNN 63

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            HGQLG   +       P R    E   +T  +CG   ++ L++     + + G    GQ
Sbjct: 64  DHGQLGH-DLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTN--WGQVFSWGSNAVGQ 120

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGH  +N               QP PR I A+  + +V++A G  H +A+ + G +Y WG
Sbjct: 121 LGHDAEN-------------GRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGELYAWG 167

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
              YG+LG      E VP    +     V  P A I+ G  +S   +  G ++ WGK   
Sbjct: 168 SNSYGQLG-IGTTSEKVPMPTLIQSLAGV--PIAFIACGGNHSFAVSKSGAIFGWGKNTF 224

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
                N+ +   YP  L  L    +R +  G +   F+  +    + G   +G+LG+G  
Sbjct: 225 GQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLGHG-- 282

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              +  +P+KV  L G  +  +ACG  H+L  V
Sbjct: 283 SCSNEIVPRKVFELMGSKITQIACGRRHTLAFV 315



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G   G     +  PT ++ L GV I F+A G    H  AV   G  
Sbjct: 161 GELYAWGSNSYGQLG--IGTTSEKVPMPTLIQSLAGVPIAFIACG--GNHSFAVSKSGAI 216

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG+N  GQLG  D   R  PT +  L    ++    G   +V +T +G     G    
Sbjct: 217 FGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTF 276

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG GS  NEI P  V  L+ S++T  ACG   T+      G  I   GL   GQLG G
Sbjct: 277 GQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRG-KIYGFGLGGVGQLGIG 335

Query: 199 TDNEYNT 205
               ++T
Sbjct: 336 MVGNHST 342



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT+LR L  + +R+++ G      V +  EG  +T G    GQLGHG       P  V E
Sbjct: 238 PTQLRTLRSLGVRYISCG--DDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFE 295

Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L   KI +   GR HT+  V   G    FG    GQLG G + N   P  VR
Sbjct: 296 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 347



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 18/168 (10%)

Query: 250 VYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           +Y WG   +G LG    E++   VPR++D  Q + V+  E     G+ ++      G++Y
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVEC----GTSHTLFLTKEGKMY 58

Query: 308 M-----WGKLKNNGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQY 359
                  G+L ++ D     +P  L  L  + + C+  G  H     +     SWG    
Sbjct: 59  ACGNNDHGQLGHDLDTLPNKRPQRLTSLENYIITCISCGTAHSLALTNWGQVFSWGSNAV 118

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           G+LG+     +    P+ +  +   HV+ +A G  H L +   TN GE
Sbjct: 119 GQLGHDAENGRQPT-PRMIKAIGAKHVVQIASGQYHCLAL---TNNGE 162


>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
 gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
          Length = 1379

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 159/357 (44%), Gaps = 32/357 (8%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            ++P +++      +  +AAG    H +AV  +G  ++WG N  GQLG G   Q   P  V
Sbjct: 1016 LTPVQVQVQGLTGVAAIAAGF--SHTLAVRQDGTVWSWGGNAYGQLGDGTTAQSLTPVQV 1073

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
              L+   +    AG +HTV +  DG   A+G N  GQLG G+  +   P  V+ L + V 
Sbjct: 1074 QGLTG--VTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL-TGVI 1130

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
            A A G+  TV L   +  ++   G   +GQLG GT     T              P  + 
Sbjct: 1131 AIAAGSLHTVALR--QDGTVWAWGRNSWGQLGDGTTTHRAT--------------PVQVQ 1174

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
             L G  ++ +A G+ HTVA+   G V+ WGF   G+LG         P +V        +
Sbjct: 1175 GLTG--VIAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQGLTGVTTI 1232

Query: 285  PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
                  +A +V    TA      +WG+L +    D   P  +  L+G  +  + +G  H 
Sbjct: 1233 AAGYFHTA-AVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGLTG--VSALAAGYAHT 1289

Query: 344  -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              VG D +  +WG+    +LG G    +S+  P +V+ L G    S+A G  H++ +
Sbjct: 1290 VVVGEDGTVWAWGNNSGTQLGNGSSTDRST--PVQVEALTG--AFSLAAGRFHTVAM 1342



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 154/357 (43%), Gaps = 32/357 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P +++ L GV     A      H VAV  +G  + WG    GQLG G  + R  P  V
Sbjct: 512 LTPVQVQGLAGV----TAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQV 567

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L+   +    AG +HTV + +DG   A+G+N +GQLG G+    + P  V  +   V 
Sbjct: 568 QGLTG--VTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAGHLTPVQVPGVTGAV- 624

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G   TV L  ++  ++   G   +GQLG GT    ++              P  + 
Sbjct: 625 AIAAGGSHTVAL--LQDGTVWTWGYNIWGQLGDGTTTHRHS--------------PVQVQ 668

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNV 283
            LA   ++ +A    HTVAV   G V+TWG    G+LG         P +V  +     +
Sbjct: 669 GLA--DVIAIATNNGHTVAVRQDGTVWTWGLNSSGQLGDGTTTQRLTPVQVHGLTDATAI 726

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           L   +   A   + +  A G     WG+L  +G       P+      ++  M +G  H 
Sbjct: 727 LTSSSQTVAMRQDRTLWAWGDN--HWGQL-GDGTTTRRLTPVQVQGLMDVTAMAAGGYHM 783

Query: 344 -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              G D +  +WG   YG+LG GP   +   +P +V  L      ++A G  H++ +
Sbjct: 784 AAAGQDGTLWTWGLNSYGQLGGGPLSYR--LLPVQVQGLTSATATAIAAGDSHTVAV 838



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 156/368 (42%), Gaps = 50/368 (13%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            ++P +++ L+  D+  +AAG    H  A   +G  +TWG N  GQLG G    R  P  V
Sbjct: 762  LTPVQVQGLM--DVTAMAAG--GYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQV 817

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEV 163
              L+        AG SHTV V +DG   A+G N  GQLG G+    + P  V+   + +V
Sbjct: 818  QGLTSATATAIAAGDSHTVAVRQDGTVWAWGSNFSGQLGDGTTAQSLTPVQVQVQGLMDV 877

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            TA A G       ++ +  ++   GL  YGQLG G             L+Y   P    +
Sbjct: 878  TAMAAGGYHMA--AAGQDGTLWTWGLNSYGQLGGG------------PLSYRLLP----V 919

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                   +  +A G  H  A    G ++TWG   YG+LG        +P +V        
Sbjct: 920  QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNSYGQLGGGPLSYRLLPVQV------QG 973

Query: 284  LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL-----------MDLSGWN 332
            L     ++AG  + +     G L+ WG L + G   +   PL             L+G  
Sbjct: 974  LMSVTAMAAGGYHMAAAGQDGTLWTWG-LNSYGQ--LGGGPLSQSLTPVQVQVQGLTG-- 1028

Query: 333  LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
            +  + +G  H   V  D +  SWG   YG+LG G   Q  S  P +V  L G+  IS   
Sbjct: 1029 VAAIAAGFSHTLAVRQDGTVWSWGGNAYGQLGDGTTAQ--SLTPVQVQGLTGVTAIS--A 1084

Query: 392  GYGHSLVI 399
            G  H++ +
Sbjct: 1085 GDAHTVAL 1092



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 157/362 (43%), Gaps = 46/362 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P +++ L GV    +AAG +  + VA   +G  + WG NE GQLG G   +R  P  V 
Sbjct: 363 TPVQVQGLTGVTA--IAAGYL--YTVASKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQ 418

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L+   +    AG  +TV   +DG   A+G NK  QLG G++     P  V+ L   +TA
Sbjct: 419 GLTG--VTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGL-EGITA 475

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A     TV  +  +  ++   G    GQLG GT     T              P  +  
Sbjct: 476 IAASNLLTV--AVRQDGTVWAWGDNARGQLGDGTTTRRLT--------------PVQVQG 519

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           LAG  +  VA    H VAV   G V+ WG G +G+LG     D   P +V        L 
Sbjct: 520 LAG--VTAVAASDYHLVAVRQDGTVWAWGVGFWGQLGDGTGMDRSTPVQV------QGLT 571

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDS 338
               I+AGS ++      G ++ WG   N G          + P  +  ++G     + +
Sbjct: 572 GVTAIAAGSNHTVALRQDGTVWAWG-FNNYGQLGDGTTAGHLTPVQVPGVTG--AVAIAA 628

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G  H   +  D +  +WG+  +G+LG G    + S  P +V  L    VI++A   GH++
Sbjct: 629 GGSHTVALLQDGTVWTWGYNIWGQLGDGTTTHRHS--PVQVQGLA--DVIAIATNNGHTV 684

Query: 398 VI 399
            +
Sbjct: 685 AV 686



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 156/364 (42%), Gaps = 46/364 (12%)

Query: 41  DGNLVSPTRLRPLVGVDI----RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           DG L   T  R    V +      +AAG    H VA   +G  +TWGRN  GQLG G  I
Sbjct: 102 DGQLGDGTTTRRFSPVQVMTGATAIAAGI--YHTVAASQDGTVWTWGRNSSGQLGDGTSI 159

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           QR  P  V  L+   +    AGR+H+  + + G    +G N  GQLG G+    + P  V
Sbjct: 160 QRFSPVQVQGLT--GVTAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQV 217

Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
           + L   +  +A  ++    ++  +  ++   G    GQLG GT        ++V+     
Sbjct: 218 QGLTGVIAISANDSET---VALRQDGTVWAWGNNSSGQLGDGT--------TTVRFT--- 263

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
              P  +  L G  +  +A G    VA+   G ++ WG    G+LG+      + P +V 
Sbjct: 264 ---PVQVLGLTG--VTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQV- 317

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSG 330
                  L     I+A  +++      G L+ WG   +   GD        P  +  L+G
Sbjct: 318 -----QGLTGVTAIAASGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVRFTPVQVQGLTG 372

Query: 331 WNLRCMDSGNMHHFVG-ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  + +G ++      D +  +WG  ++G+LG G   ++ +  P +V  L G  V ++
Sbjct: 373 --VTAIAAGYLYTVASKQDGTVWAWGDNEWGQLGDGTTTRRLT--PVQVQGLTG--VTAI 426

Query: 390 ACGY 393
           A GY
Sbjct: 427 AAGY 430



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 141/332 (42%), Gaps = 42/332 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +AV  +G  + WG N+ GQLG G   +R  P  V            AG  HTV  ++D
Sbjct: 84  HTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV----MTGATAIAAGIYHTVAASQD 139

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G    +G N  GQLG G+      P  V+ L + VTA A G + +  L   +G ++   G
Sbjct: 140 GTVWTWGRNSSGQLGDGTSIQRFSPVQVQGL-TGVTAVAAGRNHSAALG--QGGTVWTWG 196

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLG GT  +  T              P  +  L G  ++ ++   + TVA+   G
Sbjct: 197 DNLVGQLGDGTSTQRLT--------------PVQVQGLTG--VIAISANDSETVALRQDG 240

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG    G+LG       + P  V V     V      I+AG   +      G L+ 
Sbjct: 241 TVWAWGNNSSGQLGDGTTTVRFTP--VQVLGLTGV----TAIAAGGGFAVALRQDGTLWA 294

Query: 309 W-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           W     G+L N      Y P+ +  L+G  +  + +  +H   +  D +  +WG+   G+
Sbjct: 295 WGSNSRGQLGNGTTFGSYRPEQVQGLTG--VTAIAASGIHTVALRQDGTLWAWGNNSSGQ 352

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
           LG G    + +  P +V  L G  V ++A GY
Sbjct: 353 LGDGTTTVRFT--PVQVQGLTG--VTAIAAGY 380



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 105/232 (45%), Gaps = 25/232 (10%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P +++ L GV    +A    S H VA+  +G  + WG N+ GQLG G   +R  P  V 
Sbjct: 1169 TPVQVQGLTGV----IAIAAGSLHTVALRQDGTVWAWGFNDLGQLGDGTTTRRLTPAQVQ 1224

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             L+   +    AG  HT  V +DG +  +G+N  GQLG G+  +   P  V+ L + V+A
Sbjct: 1225 GLTG--VTTIAAGYFHTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQVQGL-TGVSA 1281

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             A G   TV +   E  ++   G     QLG+G+  + +T              P  + A
Sbjct: 1282 LAAGYAHTVVVG--EDGTVWAWGNNSGTQLGNGSSTDRST--------------PVQVEA 1325

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            L G     +A G  HTVA+   G  + WG    G++G     D   P  V V
Sbjct: 1326 LTGA--FSLAAGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTADRPTPVNVMV 1375



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 78/161 (48%), Gaps = 9/161 (5%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            ++P +++ L GV    +AAG    H  AV  +G  +TWG N  GQLG G    R  P  V
Sbjct: 1218 LTPAQVQGLTGVTT--IAAGYF--HTAAVRQDGTAWTWGFNLWGQLGDGTFTDRATPVQV 1273

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
              L+   +    AG +HTVVV EDG   A+G N   QLG+GS  +   P  V  L    +
Sbjct: 1274 QGLTG--VSALAAGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVEALTGAFS 1331

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
              A G   TV +S  +GA     G    GQ+G GT  +  T
Sbjct: 1332 -LAAGRFHTVAMSP-DGAG-WGWGRNNLGQVGDGTTADRPT 1369



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 61/120 (50%), Gaps = 10/120 (8%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P +++ L GV    +AAG    H V V  +G  + WG N   QLG+G    R  P  V 
Sbjct: 1269 TPVQVQGLTGVSA--LAAGY--AHTVVVGEDGTVWAWGNNSGTQLGNGSSTDRSTPVQVE 1324

Query: 106  ELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L+  + +    AGR HTV ++ DG    +G N  GQ+G G+  +   P+PV  +V E T
Sbjct: 1325 ALTGAFSLA---AGRFHTVAMSPDGAGWGWGRNNLGQVGDGTTAD--RPTPVNVMVQEGT 1379



 Score = 58.5 bits (140), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 76/285 (26%), Positives = 114/285 (40%), Gaps = 37/285 (12%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
           +  AG G +HT+ V +DG   A+G N  GQLG G+      P  V   ++  TA A G  
Sbjct: 76  VLAAGNG-NHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQV---MTGATAIAAGIY 131

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            TV  ++ +  ++   G    GQLG GT  +              +  P  +  L G  +
Sbjct: 132 HTV--AASQDGTVWTWGRNSSGQLGDGTSIQ--------------RFSPVQVQGLTG--V 173

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
             VA G NH+ A+   G V+TWG    G+LG         P +V        L     IS
Sbjct: 174 TAVAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLTPVQV------QGLTGVIAIS 227

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCMDSGNMHHFV 345
           A    +      G ++ WG   +   GD        P  ++ L+G        G     +
Sbjct: 228 ANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLTG-VTAIAAGGGFAVAL 286

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
             D +  +WG    G+LG G      S  P++V  L G+  I+ +
Sbjct: 287 RQDGTLWAWGSNSRGQLGNGT--TFGSYRPEQVQGLTGVTAIAAS 329



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 76/174 (43%), Gaps = 21/174 (12%)

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           A AA AG   V  A   NHT+AV   G V+ WG    G+LG     D    RR   F   
Sbjct: 68  AFAAPAGP--VLAAGNGNHTLAVRQDGTVWAWGNNDDGQLG-----DGTTTRR---FSPV 117

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRC 335
            V+     I+AG  ++   +  G ++ WG+  +   GD        P  +  L+G  +  
Sbjct: 118 QVMTGATAIAAGIYHTVAASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLTG--VTA 175

Query: 336 MDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
           + +G  H   +G   +  +WG    G+LG G   Q+ +  P +V  L G+  IS
Sbjct: 176 VAAGRNHSAALGQGGTVWTWGDNLVGQLGDGTSTQRLT--PVQVQGLTGVIAIS 227


>gi|159038147|ref|YP_001537400.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916982|gb|ABV98409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 166/393 (42%), Gaps = 50/393 (12%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
            +L  G   +  +G   GA D +   P  L P  G  +  +AAG    H +A+   G   
Sbjct: 57  TVLAWGDNLFGQLGDGTGA-DSDTPIPVSLPP--GTTVTAIAAG--DEHSLALTSTGTVL 111

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
            WGRN  GQLG      R  P  VS      +    AGRSH++ +T  G++LA+G N  G
Sbjct: 112 AWGRNRFGQLGDETNTSRSTPVTVSLPPGTTVTAIAAGRSHSLAITSTGSALAWGRNFSG 171

Query: 141 QLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           QLG G+  +  +P  V     + VTA A G   ++ ++S   A  L  G    GQLG GT
Sbjct: 172 QLGDGTTNDSNKPVAVNLPPGTTVTAIAAGDGHSLAVTSAGTA--LAWGRNFAGQLGDGT 229

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
            N+  T              P  ++   G T+  +A G  H++A+ S G    WG  G G
Sbjct: 230 TNDSTT--------------PVTVSVAPGTTVTDIAAGRVHSLAITSAGTALGWGRNGSG 275

Query: 260 RLGH-----------REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY- 307
           +LG                   V   V   + +++    AV SAG    +  A G  LY 
Sbjct: 276 QLGDGTTNDSTTPTTVSPPTGTVFTTVAAGEDHSL----AVTSAG----TALAAGDNLYG 327

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
             G   N   +      L   +   +  +  G  H+  V A  + ++WG    G+LG G 
Sbjct: 328 QLGDGTNTSSNTFVTVSLPPST--TITAIAVGRFHNLGVTATGAALAWGINIDGQLGDGT 385

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              +++  P+ VD+       +VA G+GHSL +
Sbjct: 386 TTNRNT--PQAVDLPVST---TVAGGFGHSLAL 413



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 97/250 (38%), Gaps = 27/250 (10%)

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            +   +  +   A  T+  S+V   ++L  G   +GQLG GT  + +T            
Sbjct: 32  AVTQAIAVSPTAAQNTLSPSTVGSDTVLAWGDNLFGQLGDGTGADSDT------------ 79

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  ++   G T+  +A G  H++A+ S G V  WG   +G+LG         P  V +
Sbjct: 80  --PIPVSLPPGTTVTAIAAGDEHSLALTSTGTVLAWGRNRFGQLGDETNTSRSTPVTVSL 137

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGW 331
                V      I+AG  +S      G    WG+           +D   P  +    G 
Sbjct: 138 PPGTTV----TAIAAGRSHSLAITSTGSALAWGRNFSGQLGDGTTNDSNKPVAVNLPPGT 193

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  + +G+ H   V +  + ++WG    G+LG G      S  P  V +  G  V  +A
Sbjct: 194 TVTAIAAGDGHSLAVTSAGTALAWGRNFAGQLGDG--TTNDSTTPVTVSVAPGTTVTDIA 251

Query: 391 CGYGHSLVIV 400
            G  HSL I 
Sbjct: 252 AGRVHSLAIT 261


>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
          Length = 1039

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 126/261 (48%), Gaps = 25/261 (9%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            G L  CGS     +GR+  + DG   SP  +    G  +  +A G    H +A+D  G+
Sbjct: 53  NGHLYTCGSNEVGQLGRQTNSADG--TSPVLVDTFKGCTLSTIACGLQ--HSMALDEWGQ 108

Query: 79  CYTWGRNERGQLGH--GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
            ++WG +  GQLG   G   Q D+P I+  L+   + +   G  HTVV+T +G+  A+G 
Sbjct: 109 PFSWGSDSMGQLGSNLGSHAQ-DKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGA 167

Query: 137 NKHGQLGSGSIRN-EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           N +GQ G G+  N E  P  +  ++   +   ACG++ T  LS  +  ++   G   +GQ
Sbjct: 168 NSYGQCGLGNRSNKETTPQALSSILGIPIALIACGSNHTFALS--QSGAVFGWGKNSHGQ 225

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG         +D       E++  P  +  L    +  ++CG + T  +   G V+T G
Sbjct: 226 LG--------LQDR------ESRCYPTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCG 271

Query: 255 FGGYGRLGHREQKDEWVPRRV 275
            G YG+ GH   KDE VPR+V
Sbjct: 272 AGEYGQTGHGNTKDELVPRKV 292



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 98/329 (29%), Positives = 152/329 (46%), Gaps = 54/329 (16%)

Query: 102 TIVSELSKYK----IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
            I   LSK+K    I++  AG  HT+ ++ +G+    G N+ GQLG  +  N  +  SPV
Sbjct: 23  VIKPTLSKWKESSHIQQISAGEFHTLYLSNNGHLYTCGSNEVGQLGRQT--NSADGTSPV 80

Query: 157 R------CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
                  C +S +   ACG   ++ L   E     + G    GQLG              
Sbjct: 81  LVDTFKGCTLSTI---ACGLQHSMALD--EWGQPFSWGSDSMGQLGSN------------ 123

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKD 268
            L   AQ +P+ I  LA + +++VACG+ HTV + + G +Y WG   YG+  LG+R  K 
Sbjct: 124 -LGSHAQDKPKIIKTLATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNK- 181

Query: 269 EWVPRRVDVFQRNNVL-PPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMY 321
           E  P+ +     +++L  P A+I+ GS ++   +  G ++ WGK  +      + +   Y
Sbjct: 182 ETTPQAL-----SSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCY 236

Query: 322 PKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           P  L  L    +  +  G +   F+  D    + G  +YG+ G+G    K   +P+KV  
Sbjct: 237 PTHLKTLRNVKVCHISCGEDFTAFLTLDGGVFTCGAGEYGQTGHG--NTKDELVPRKVME 294

Query: 381 LEGMHVISVACGYGHSLVIVDRTNVGERL 409
           L G  V  VACG  H L       VGER+
Sbjct: 295 LMGSTVTQVACGRRHMLC-----RVGERI 318



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 150/350 (42%), Gaps = 37/350 (10%)

Query: 29  CWDAVGRRKGALD--GNL---VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
           CW      +  ++  GNL   + PT  +      I+ ++AG    H + +   G  YT G
Sbjct: 3   CWGNATHHELCIECPGNLDLVIKPTLSKWKESSHIQQISAG--EFHTLYLSNNGHLYTCG 60

Query: 84  RNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
            NE GQLG   +      P +V       +     G  H++ + E G   ++G +  GQL
Sbjct: 61  SNEVGQLGRQTNSADGTSPVLVDTFKGCTLSTIACGLQHSMALDEWGQPFSWGSDSMGQL 120

Query: 143 GS--GSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           GS  GS   + +P  ++ L ++ V   ACG+  TV L++     +   G   YGQ G G 
Sbjct: 121 GSNLGS-HAQDKPKIIKTLATKNVIQVACGSYHTVVLTN--NGDLYAWGANSYGQCGLGN 177

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
            +   T              P+A++++ G  I  +ACG+NHT A+   G V+ WG   +G
Sbjct: 178 RSNKETT-------------PQALSSILGIPIALIACGSNHTFALSQSGAVFGWGKNSHG 224

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------ 313
           +LG ++++    P  +   +   V      IS G   ++     G ++  G  +      
Sbjct: 225 QLGLQDRESRCYPTHLKTLRNVKV----CHISCGEDFTAFLTLDGGVFTCGAGEYGQTGH 280

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELG 363
            N  D + P+ +M+L G  +  +  G  H         ++ G+   G+LG
Sbjct: 281 GNTKDELVPRKVMELMGSTVTQVACGRRHMLCRVGERILACGYGARGQLG 330



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT L+ L  V +  ++ G        + ++G  +T G  E GQ GHG+      P  V E
Sbjct: 237 PTHLKTLRNVKVCHISCG--EDFTAFLTLDGGVFTCGAGEYGQTGHGNTKDELVPRKVME 294

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           L    + +   GR H +    +   LA G+   GQLG   +   + P+PV
Sbjct: 295 LMGSTVTQVACGRRHMLCRVGE-RILACGYGARGQLGCPHMAFALVPTPV 343


>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 479

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 122/254 (48%), Gaps = 29/254 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           ++ +AAG    H VA+  +G  + WG N+ GQLG G    R  P  V  +S   +    A
Sbjct: 228 VKAIAAGA--YHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIAA 283

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
           G  HTV +  DG   A+G N+H QLG+ + + E   +PV+   +S+V A A GA +TV L
Sbjct: 284 GMYHTVALKNDGTVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVL 343

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            +    ++   G+ +YG+LG GT N   T              P  +  ++   +  +A 
Sbjct: 344 KN--DGTVWAWGVNEYGKLGDGTTNNSFT--------------PVQVNGISN--VKAIAA 385

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G  HTV + + G V+TWG+  YG LG+    D   P +V        +     I+AG+ +
Sbjct: 386 GAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQV------KGISDVKAIAAGACH 439

Query: 297 SSCTAGGGQLYMWG 310
           +      G ++ WG
Sbjct: 440 TVALKNDGTVWAWG 453



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 115/246 (46%), Gaps = 23/246 (9%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+       N   P +++ +   D+  +AAG    H VA+  +G  + WG NE  Q
Sbjct: 252 WNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIAAGM--YHTVALKNDGTVWAWGDNEHDQ 307

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG+    +    T V       +K   AG S+TVV+  DG   A+G N++G+LG G+  N
Sbjct: 308 LGNETTKEEYHSTPVQVKGISDVKAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNN 367

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
              P  V   +S V A A GA  TV L +    ++   G   YG+LG+GT     T DSS
Sbjct: 368 SFTPVQVNG-ISNVKAIAAGAYHTVVLKN--DGTVWTWGYNHYGELGNGT-----TVDSS 419

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
             +  +     +AIAA           G  HTVA+ + G V+ WG   YG LG+    D 
Sbjct: 420 TPVQVKGISDVKAIAA-----------GACHTVALKNDGTVWAWGCNYYGELGNGTAVDS 468

Query: 270 WVPRRV 275
             P +V
Sbjct: 469 STPVQV 474



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/273 (27%), Positives = 122/273 (44%), Gaps = 32/273 (11%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGAD 171
           +K   AG  HTV +  DG   A+GWN  GQLG G+  N   P  V+  +S+V A A G  
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWGWNDCGQLGDGTTTNRTIPVQVKG-ISDVVAIAAGMY 286

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            TV L +    ++   G  ++ QLG+ T  E            E    P  +  ++   +
Sbjct: 287 HTVALKN--DGTVWAWGDNEHDQLGNETTKE------------EYHSTPVQVKGISD--V 330

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
             +A G ++TV + + G V+ WG   YG+LG     + + P +V      N +     I+
Sbjct: 331 KAIAAGASYTVVLKNDGTVWAWGVNEYGKLGDGTTNNSFTPVQV------NGISNVKAIA 384

Query: 292 AGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
           AG+ ++      G ++ W     G+L N    D   P  +  +S  +++ + +G  H   
Sbjct: 385 AGAYHTVVLKNDGTVWTWGYNHYGELGNGTTVDSSTPVQVKGIS--DVKAIAAGACHTVA 442

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           +  D +  +WG   YGELG G     S+ +  K
Sbjct: 443 LKNDGTVWAWGCNYYGELGNGTAVDSSTPVQVK 475


>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
 gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
          Length = 1056

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 184/425 (43%), Gaps = 67/425 (15%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G +  CGS  +  +G+ K        +P  +  +    I  V  G    H VAV  +G
Sbjct: 52  KDGTVYTCGSNEFGQLGQEKSH-----TNPESVHAIETFTITKVTCG--KAHTVAVSDQG 104

Query: 78  RCYTWGRNERGQLGHGDKIQ---RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
             + WG N  GQ+G G K++   +  P ++  L+K  + +   G +H++ +T  G+   +
Sbjct: 105 LVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCW 164

Query: 135 GWNKHGQLGSGSIRNEI-EPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           G N  GQLG G   + + EP+PV  L  V  +  +A GA  +  LSS    ++   G  +
Sbjct: 165 GDNSSGQLGIGKTHSSMSEPAPVLSLNGVPFMLISAGGAH-SFALSS--SGALFGWGKNE 221

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG      ++T D         +P P  + +L  + +  V+CG  HT  + S G V+
Sbjct: 222 YGQLG-----VHDTTD---------RPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVF 267

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQ----------RNNVLPPEAVISAGSVNSSCTA 301
           T+G G  G+LGH     E+ PR+V              R + L    V S+G V +    
Sbjct: 268 TFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTL--ALVPSSGRVYTFGRG 325

Query: 302 GGGQL----------YMWGK---LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
           G GQL           M  K   L++N    M P+   D   + +R +D+G  H F  A 
Sbjct: 326 GDGQLGLGVTNNCNSPMTAKGPWLRSNNIKSMLPEADGDSVVYTVRRIDAGGDHCFAMAS 385

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
           S         YG+   GP   +   +P+    +  + V         + +  D ++V E+
Sbjct: 386 S---------YGDETDGPEDMR---LPRPSQSILHLSVPVTMDLVKRATIASDLSDVSEK 433

Query: 409 LDQVI 413
           L+ + 
Sbjct: 434 LEIIF 438



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 148/332 (44%), Gaps = 31/332 (9%)

Query: 80  YTWGRNERGQLGHGDKIQR--DRPTIVSELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           + WG+   GQLG G+  Q     P ++  L     +++   G +HT  + +DG     G 
Sbjct: 2   FCWGKCSEGQLGVGETEQEFISTPRLLENLEFSSNVREVSCGWNHTAFLCKDGTVYTCGS 61

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N+ GQLG    ++   P  V  + +  +T   CG   TV +S  +   +   G   YGQ+
Sbjct: 62  NEFGQLGQE--KSHTNPESVHAIETFTITKVTCGKAHTVAVS--DQGLVFAWGDNSYGQI 117

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G+           K+  + Q  P+ +  LA  ++V++ACG NH++A+   G+++ WG 
Sbjct: 118 GLGS-----------KVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGHLFCWGD 166

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
              G+LG  +     +     V   N V  P  +ISAG  +S   +  G L+ WGK +  
Sbjct: 167 NSSGQLGIGKTHSS-MSEPAPVLSLNGV--PFMLISAGGAHSFALSSSGALFGWGKNEYG 223

Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYG 368
               ++  D   P  L  L    +  +  G  H  V  +D    ++G    G+LG+    
Sbjct: 224 QLGVHDTTDRPLPTLLKSLRSQGVCYVSCGEKHTAVLTSDGGVFTFGCGTSGQLGHN--S 281

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                 P+KV  L G  V  +ACG  H+L +V
Sbjct: 282 NHHEYTPRKVFELMGSVVTQIACGRAHTLALV 313



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 143/327 (43%), Gaps = 36/327 (11%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           VSC   H   +  +G  YT G NE GQLG   +     P  V  +  + I K   G++HT
Sbjct: 40  VSCGWNHTAFLCKDGTVYTCGSNEFGQLGQ--EKSHTNPESVHAIETFTITKVTCGKAHT 97

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGS-IRNEIE--PSPVRCLVS-EVTATACGADFTVWLSS 178
           V V++ G   A+G N +GQ+G GS ++ +++  P  ++ L    V   ACG + ++ L+ 
Sbjct: 98  VAVSDQGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTI 157

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                +   G    GQLG G               + +   P  + +L G   + ++ G 
Sbjct: 158 --SGHLFCWGDNSSGQLGIGK-------------THSSMSEPAPVLSLNGVPFMLISAGG 202

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H+ A+ S G ++ WG   YG+LG  +  D  +P  +   +   V      +S G  +++
Sbjct: 203 AHSFALSSSGALFGWGKNEYGQLGVHDTTDRPLPTLLKSLRSQGV----CYVSCGEKHTA 258

Query: 299 CTAGGGQLYMW-----GKLKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFVGADSS-- 350
                G ++ +     G+L +N +   Y P+ + +L G  +  +  G  H      SS  
Sbjct: 259 VLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVVTQIACGRAHTLALVPSSGR 318

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKK 377
             ++G    G+LG G     +S M  K
Sbjct: 319 VYTFGRGGDGQLGLGVTNNCNSPMTAK 345


>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
           6115]
 gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
           kuznetsovii DSM 6115]
          Length = 1401

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 148/335 (44%), Gaps = 56/335 (16%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  ++ L GV    VA    S + +A+  +G  + WG N  GQLG G    R  P  V 
Sbjct: 59  TPVPVQNLTGV----VAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTTNRYTPVQVQ 114

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT- 164
            L+      AG G  H++ +  DG   A+G+N +GQLG G+I N   P  V+ L   V  
Sbjct: 115 NLTGVVAIAAGGG--HSLALKSDGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVVAV 172

Query: 165 ------ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQ 217
                 + A  +D TVW     G          YGQLG GT  N Y              
Sbjct: 173 AAGGGHSLALKSDGTVWAWGYNG----------YGQLGDGTTMNRYT------------- 209

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  +  L G  +V +A G++H++A+ S G V+ WG  GYG+LG     +   P RV  
Sbjct: 210 --PVQVQNLTG--VVAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPVRVQG 265

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY-PKPLMDLSGW 331
                       I+AG+ +S      G ++ W     G+L +      Y P  + +L+G 
Sbjct: 266 LTD------VVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNLTG- 318

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
            +  + +G  H   + +D +  +WG+  +GELG G
Sbjct: 319 -VVAIAAGGGHSLALKSDGTVWAWGNNDWGELGDG 352



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/195 (30%), Positives = 93/195 (47%), Gaps = 16/195 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +P +++ L GV    VA    S H +A+  +G  + WG N  GQLG G    R  P 
Sbjct: 206 NRYTPVQVQNLTGV----VAIAAGSSHSLALKSDGTVWAWGNNGYGQLGDGTTTNRTTPV 261

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V  L+   +    AG  H++ +  DG    +GWN  GQLG G+  N   P  V+ L + 
Sbjct: 262 RVQGLTD--VVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNRYTPVQVQNL-TG 318

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT--KDSSVKLAYEAQP-- 218
           V A A G   ++ L S    ++   G   +G+LG GT  + +T  + S + L  +  P  
Sbjct: 319 VVAIAAGGGHSLALKS--DGTVWAWGNNDWGELGDGTRTDRHTPVQVSGLNLGQQTTPDT 376

Query: 219 ---RPRAIAALAGET 230
               P +++ +AG+T
Sbjct: 377 LLVSPASLSIIAGQT 391


>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 566

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 170/367 (46%), Gaps = 52/367 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+G D+R +A  C + H  A +  G  YTWG  + G+LGH  +  R  P  VS 
Sbjct: 169 PRVVEALLGKDVRGIA--CGAAHTAAWNGAGVLYTWGAGQ-GRLGHDHERDRFIPLEVSA 225

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L   K+ +A  G +HT  +T+ G    +G  K G LG G       P  V  L  +V   
Sbjct: 226 LGGKKVVQAACGYAHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASLALQVIVV 285

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
                    + +    ++   G  + GQLG G        D + +++      P  +A L
Sbjct: 286 VIVVVVVAAVVAGGSGTVYAWGGNEKGQLGFG--------DRTPRMS------PALLADL 331

Query: 227 AGETIVKVACG---TNHTVAVDSKGY-----VYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +  +I ++AC    +N  V    +       ++TWG G  G+LGH  +++E VPR+V   
Sbjct: 332 S--SISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVMAL 389

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNL 333
           ++ N++     ++AG  +++     G+++ WG     +L +      Y KPL+  S    
Sbjct: 390 EQVNII----AVAAGKAHTAALTSQGEVWTWGDGSDGQLGHGAAILRYCKPLLIES---- 441

Query: 334 RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
              DSG+++          +WG+++ G LG G   ++  ++P+ V+ +EG  V +VACG 
Sbjct: 442 -LKDSGHLY----------AWGNSRRGALG-GGLAEEVVSVPRAVEAMEGKKVKAVACGK 489

Query: 394 GHSLVIV 400
            H   +V
Sbjct: 490 RHCAALV 496



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 125/283 (44%), Gaps = 36/283 (12%)

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N +G++G G   +   P  V  L+  +V   ACGA  T   ++  GA +L       G+L
Sbjct: 153 NDNGRVGHGDEEDHKVPRVVEALLGKDVRGIACGAAHT---AAWNGAGVLYTWGAGQGRL 209

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GH  D+E   +D  +         P  ++AL G+ +V+ ACG  HT A+   G VYTWG 
Sbjct: 210 GH--DHE---RDRFI---------PLEVSALGGKKVVQAACGYAHTAAITDAGRVYTWGQ 255

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
           G  G LGH ++     PR V       +     VI    V +    G G +Y WG  +  
Sbjct: 256 GKGGVLGHGDESACSTPREVASLA---LQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKG 312

Query: 316 ----GDDW--MYPKPLMDLSGWN-LRC------MDSGNMHHFVGADSSCISWGHAQYGEL 362
               GD    M P  L DLS  + + C      +     H          +WG    G+L
Sbjct: 313 QLGFGDRTPRMSPALLADLSSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQL 372

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+G   ++   +P++V  LE +++I+VA G  H+  +  +  V
Sbjct: 373 GHGT--EEEELVPRQVMALEQVNIIAVAAGKAHTAALTSQGEV 413


>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 530

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 113/253 (44%), Gaps = 21/253 (8%)

Query: 51  RPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
           RP+ G    R     C   H V V  + R +T+G N  GQLGHGD   R  P  ++    
Sbjct: 153 RPVAGFAGYRVTKVACSYSHTVVVTDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQG 212

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
             +     G  HTVV    G   +FG N HGQLG     +   P   R   S V   ACG
Sbjct: 213 LGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGLEGGESRFTPVQHRACTSVVEQLACG 272

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
              TV LS      ++  G   YGQLG G                E+  +   +  LAG 
Sbjct: 273 YYHTVALS--RAGEVVAFGRNDYGQLGLG--------------HRESTWQGGQVPDLAGL 316

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I++VACG+ HT+++D +G VY +G   +G+LG   ++D   P  V+   ++ V      
Sbjct: 317 RIIQVACGSYHTISLDDEGRVYPFGRNNHGQLGTGTREDACRPCFVEGLSQSFVCQ---- 372

Query: 290 ISAGSVNSSCTAG 302
           ++AG  ++ C  G
Sbjct: 373 VAAGFYHTLCLTG 385



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 148/348 (42%), Gaps = 38/348 (10%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           E   Y +G+N  G+LG GD ++R  PT+        I    AG   T V+T  G   + G
Sbjct: 10  ERELYGFGQNACGELGLGDTLERHTPTLSQTSRGKDIVGVTAGNELTAVLTNTGEVYSCG 69

Query: 136 WNKHGQLGSGSIRN---EIEPSPVRCLVSE--------VTATACGADFTVWLSSVEGASI 184
           +N  GQ G G I     E+ PS  +  + E        V+    G      +   E   +
Sbjct: 70  YNSEGQCGIGEIDETVPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGEL 129

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
              G    GQLGHG           V   Y     PR +A  AG  + KVAC  +HTV V
Sbjct: 130 QTCGRNNSGQLGHG----------EVGKGYSL---PRPVAGFAGYRVTKVACSYSHTVVV 176

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
                 +T+G  GYG+LGH +      P  +  FQ   VL     ++ G  ++  +   G
Sbjct: 177 TDDDRTWTFGGNGYGQLGHGDHSSRSAPAALACFQGLGVLS----VACGVYHTVVSVASG 232

Query: 305 QLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISWGHA 357
            LY +GK     L   G +  +  P+   +  ++    +   +H V    +   +++G  
Sbjct: 233 GLYSFGKNDHGQLGLEGGESRF-TPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGRN 291

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            YG+LG G   ++S+    +V  L G+ +I VACG  H++ + D   V
Sbjct: 292 DYGQLGLGH--RESTWQGGQVPDLAGLRIIQVACGSYHTISLDDEGRV 337


>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
            magnipapillata]
          Length = 2284

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 122/268 (45%), Gaps = 19/268 (7%)

Query: 44   LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
            + SP  L  +  ++I+ ++      HC+A+  +G  ++WG  E G+LGHG++    +P  
Sbjct: 1515 VTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKR 1574

Query: 104  VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSE 162
            +       I    AG SH+  +  +G    +G  ++G+LG G   ++++P  V  L    
Sbjct: 1575 IEFFCGKIITNICAGGSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFF 1634

Query: 163  VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            V   ACG+     L      ++ + G   YG+LG G                +    P  
Sbjct: 1635 VLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRG--------------GSDGCKVPMI 1680

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            I  L+G+ IVKV CG+  ++A+   G +YTWG G Y RLGH  ++    P  V       
Sbjct: 1681 IEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKI 1740

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            V      IS GS++       G++Y WG
Sbjct: 1741 V----TSISCGSLHCVVCTDEGEVYCWG 1764



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 48/416 (11%)

Query: 13  ETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
           E    K  ++   G    D +G  KG+    + SPT    L  +  +F+A G  S   + 
Sbjct: 551 ENSTNKQVDVFMWGLNDKDQLGGLKGS---KVKSPTLCDHLSSLQCKFIAGGSKSTFFIT 607

Query: 73  VDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAG--AGRSHTVVVTEDG 129
              +G+ Y+ G +  G+LG GD       P +V+ L++  + K    +G +H + +T DG
Sbjct: 608 N--KGKLYSCGESSFGKLGIGDITGNVTSPRLVTGLNQLIVTKVSVHSGGNHVMALTSDG 665

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAG 188
            + ++G  ++GQLG G++ +  +P  +   V + VT  +CG+  +  +  VE   +   G
Sbjct: 666 LAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCGSAHSAAI--VENKYLYTWG 723

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
           L  +G+LGHG +              E   +P+ +    G  +V+V+CG+    TV +  
Sbjct: 724 LGDFGRLGHGDE--------------ETILQPKFVTHFLGYNVVQVSCGSRDAQTVCITD 769

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
              V++WG G +G+LG    +   +P  V+  +   +      I  G+  +      G +
Sbjct: 770 DDKVWSWGDGDFGKLGRGGSERCLIPVEVEQLRGLQICK----ILCGAQFTVALTKTGTV 825

Query: 307 YMWGKLKNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWG 355
           + WGK    GD +            PK +  L G ++  +  G +H   V  D    SWG
Sbjct: 826 WTWGK----GDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVFSWG 881

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQ 411
              +G+LG G    K   +P  +  L    +  VACG  HS+   + T     +D+
Sbjct: 882 DNDHGQLGTGETDVKK--VPNLITGLHNHRIKYVACGSSHSIAWTEITTSACIIDK 935



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 99/219 (45%), Gaps = 21/219 (9%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P R+    G  I  + AG    H  A+ + G  YTWG+   G+LGHGD   + +P  V  
Sbjct: 1572 PKRIEFFCGKIITNICAG--GSHSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEA 1629

Query: 107  LSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
            L  + +     G+G + T+ +T D N  ++G   +G+LG G       P  +  L  + +
Sbjct: 1630 LQFFFVLDVACGSGDAQTLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGI 1689

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG+ F++ L+      +   G   Y +LGHGT+              E   RP  +
Sbjct: 1690 VKVECGSQFSMALTKY--GVLYTWGKGDYYRLGHGTE--------------EHVRRPMMV 1733

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
             AL  + +  ++CG+ H V    +G VY WG    G+LG
Sbjct: 1734 TALFNKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLG 1772



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/344 (23%), Positives = 141/344 (40%), Gaps = 33/344 (9%)

Query: 66   VSCHCVAVDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--AGRSHT 122
            + C  V +  +G   +  G    GQLG G       P ++  +    IKK    +G  H 
Sbjct: 1482 IDCDTVCITTDGALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHC 1541

Query: 123  VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
            + ++ DG   ++G  + G+LG G+ +   +P  +     ++    C          + G 
Sbjct: 1542 LALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNG- 1600

Query: 183  SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--H 240
             +   G  +YG+LGHG  ++              Q +P+ + AL    ++ VACG+    
Sbjct: 1601 ELYTWGKGRYGRLGHGDSDD--------------QLKPKQVEALQFFFVLDVACGSGDAQ 1646

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T+ + +   V++WG G YG+LG        VP  ++      ++  E     GS  S   
Sbjct: 1647 TLCITNDDNVWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVE----CGSQFSMAL 1702

Query: 301  AGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVGADS-SCIS 353
               G LY WGK       +G +    +P+M  + +N  +  +  G++H  V  D      
Sbjct: 1703 TKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNKIVTSISCGSLHCVVCTDEGEVYC 1762

Query: 354  WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            WG    G+LG G    + +  P     L    +  ++CG  H++
Sbjct: 1763 WGDNDEGQLGDGTIIARQT--PTLNTFLLNKKIDRISCGSAHTI 1804



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 101/233 (43%), Gaps = 31/233 (13%)

Query: 178  SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC- 236
            + +GA +   G    GQLG G                E    PR + ++    I K++  
Sbjct: 1490 TTDGALVFATGYGNNGQLGLGYS--------------ETVTSPRLLESIKHINIKKISVH 1535

Query: 237  -GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
             G  H +A+ S G V++WG G  G+LGH  ++    P+R++ F    +      I AG  
Sbjct: 1536 SGGRHCLALSSDGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKII----TNICAGGS 1591

Query: 296  NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW---NLRCMDSGNMHHFVG 346
            +S+     G+LY WGK +       + DD + PK +  L  +   ++ C         + 
Sbjct: 1592 HSAAIGLNGELYTWGKGRYGRLGHGDSDDQLKPKQVEALQFFFVLDVACGSGDAQTLCIT 1651

Query: 347  ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             D +  SWG   YG+LG G  G     +P  ++ L G  ++ V CG   S+ +
Sbjct: 1652 NDDNVWSWGDGDYGKLGRG--GSDGCKVPMIIEDLSGKGIVKVECGSQFSMAL 1702



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 4/145 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L G+ I  +  G  +   VA+   G  +TWG+ +  +LGHG  I   +P +V  
Sbjct: 795 PVEVEQLRGLQICKILCG--AQFTVALTKTGTVWTWGKGDFYRLGHGTDIHVRQPKLVEG 852

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    +     G  H + VT+DG   ++G N HGQLG+G    +  P+ +  L +  +  
Sbjct: 853 LRGKHVIDIAVGALHCLAVTQDGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNHRIKY 912

Query: 166 TACGADFTV-WLSSVEGASILNAGL 189
            ACG+  ++ W      A I++  L
Sbjct: 913 VACGSSHSIAWTEITTSACIIDKPL 937



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 11/155 (7%)

Query: 52   PLVGVDIR---FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
            P++  D+     V   C S   +A+   G  YTWG+ +  +LGHG +    RP +V+ L 
Sbjct: 1678 PMIIEDLSGKGIVKVECGSQFSMALTKYGVLYTWGKGDYYRLGHGTEEHVRRPMMVTALF 1737

Query: 109  KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATA 167
               +     G  H VV T++G    +G N  GQLG G+I     P+    L++ ++   +
Sbjct: 1738 NKIVTSISCGSLHCVVCTDEGEVYCWGDNDEGQLGDGTIIARQTPTLNTFLLNKKIDRIS 1797

Query: 168  CGADFTVWLSSVEGASILNAGLP-----QYGQLGH 197
            CG+  T+  S+ + +      LP     +Y  L H
Sbjct: 1798 CGSAHTIAWSTSKASE--RRSLPLEVPVEYNNLKH 1830


>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
 gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
          Length = 1053

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 124/251 (49%), Gaps = 30/251 (11%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
           G+   A D ++V  P  +R LV   +  V   C S H +A+   G  Y+WG N  GQLG 
Sbjct: 116 GQLGHASDQDIVKLPKIVRNLVSKTV--VQIACGSNHSLALTCCGELYSWGSNLYGQLGV 173

Query: 92  --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSI 147
               D  Q + P  ++ L    +     G +H+ ++++  +S  FGW  N  GQLG    
Sbjct: 174 SSPNDLQQSNTPMRLTTLLGIPVSAIACGGNHSFLISK--SSAVFGWGRNNCGQLGLNDE 231

Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNT 205
            N   P+ ++ L +  V   ACG +F+V+L+ +EG  +   G   YGQLGHG + NE   
Sbjct: 232 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLT-IEGG-VFTCGAGAYGQLGHGFSSNEM-- 287

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHR 264
                         PR +  L G TI +VACG  HT+A V S+G +Y +G G  G+LG R
Sbjct: 288 -------------LPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTR 334

Query: 265 EQKDEWVPRRV 275
             K   +P+ V
Sbjct: 335 NTKSLNLPQLV 345



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 152/334 (45%), Gaps = 36/334 (10%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  ++ Q   P+ +       + +   G  HT+ +T  G   A G N
Sbjct: 4   YCWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKVYACGSN 63

Query: 138 KHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            + QLG     +  ++   ++  V  +T  ACG+  ++ LS  E   + + G  + GQLG
Sbjct: 64  DYSQLGHELPTKRPLQIPELQDYV--ITQIACGSRHSMALS--EWGQVFSWGDNECGQLG 119

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           H +D +       VKL       P+ +  L  +T+V++ACG+NH++A+   G +Y+WG  
Sbjct: 120 HASDQDI------VKL-------PKIVRNLVSKTVVQIACGSNHSLALTCCGELYSWGSN 166

Query: 257 GYGRLGHREQKD---EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            YG+LG     D      P R+       +  P + I+ G  +S   +    ++ WG+  
Sbjct: 167 LYGQLGVSSPNDLQQSNTPMRLTTL----LGIPVSAIACGGNHSFLISKSSAVFGWGRNN 222

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGP 366
                 N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+LG+G 
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHG- 281

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 282 -FSSNEMLPRMVMELMGSTISQVACGNRHTLALV 314



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 92/365 (25%), Positives = 159/365 (43%), Gaps = 39/365 (10%)

Query: 29  CWDAVGRRKGALDG----NLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
           CW      +  L G     +++P+R+  +P   V+       C   H + +   G+ Y  
Sbjct: 5   CWGNASHGQLGLGGIEEEQILTPSRIPWKPDSAVN----QIACGHRHTLFLTASGKVYAC 60

Query: 83  GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
           G N+  QLGH  ++   RP  + EL  Y I +   G  H++ ++E G   ++G N+ GQL
Sbjct: 61  GSNDYSQLGH--ELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQL 118

Query: 143 GSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           G  S ++ ++ P  VR LVS+ V   ACG++ ++ L+      + + G   YGQLG  + 
Sbjct: 119 GHASDQDIVKLPKIVRNLVSKTVVQIACGSNHSLALTCC--GELYSWGSNLYGQLGVSSP 176

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
           N+    ++           P  +  L G  +  +ACG NH+  +     V+ WG    G+
Sbjct: 177 NDLQQSNT-----------PMRLTTLLGIPVSAIACGGNHSFLISKSSAVFGWGRNNCGQ 225

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNN- 315
           LG  ++ +   P ++   +    L    V      +   T  GG        +G+L +  
Sbjct: 226 LGLNDETNRAYPTQLKTLR---TLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLGHGF 282

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSA 373
             + M P+ +M+L G  +  +  GN H    V +      +G    G+L  G    KS  
Sbjct: 283 SSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL--GTRNTKSLN 340

Query: 374 MPKKV 378
           +P+ V
Sbjct: 341 LPQLV 345



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 78/178 (43%), Gaps = 4/178 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G           +P RL  L+G+ +  +A G    H   +      
Sbjct: 158 GELYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLLGIPVSAIACG--GNHSFLISKSSAV 215

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WGRN  GQLG  D+  R  PT +  L    ++    G   +V +T +G     G   +
Sbjct: 216 FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTIEGGVFTCGAGAY 275

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           GQLG G   NE+ P  V  L+ S ++  ACG   T+ L    G  I   GL   GQLG
Sbjct: 276 GQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRG-RIYGFGLGSSGQLG 332


>gi|195586891|ref|XP_002083201.1| GD13608 [Drosophila simulans]
 gi|194195210|gb|EDX08786.1| GD13608 [Drosophila simulans]
          Length = 1058

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 151/335 (45%), Gaps = 38/335 (11%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P  +       +++   G  HT+ +T  G   A G N
Sbjct: 8   YCWGSTSHGQLGLGGIEDEQILTPRQIPWTPDTAVQQVSCGHRHTLFLTATGKVYACGSN 67

Query: 138 KHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            + QLG    + R ++ P     ++ +++   CG+  ++ LS  +   +L+ G    GQL
Sbjct: 68  DYSQLGHDLPTKRPQLIPELQDYVIIQIS---CGSRHSLALS--DWGQVLSWGDNDCGQL 122

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GH T+ E       V+L       P+ +  L  +T+V++ACG NH++A+ S G +Y+WG 
Sbjct: 123 GHATEKEI------VQL-------PKVVRQLVSKTVVQIACGNNHSLALTSCGELYSWGS 169

Query: 256 GGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
             YG+LG     D      P R+       +  P A I+ G  +S   +  G ++ WG+ 
Sbjct: 170 NIYGQLGVNSPNDLTHCNYPLRLTTL----LGIPLAAIACGGNHSFLISKSGAVFGWGRN 225

Query: 313 K------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYG 365
                  N+  +  YP  L  L    +R    G+    F+  +    + G   YG+LG+G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAGAYGQLGHG 285

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                +  +P+ V  L G  +  VACG  H+L  V
Sbjct: 286 --FSSNEMLPRMVMELMGSTITQVACGNRHTLAFV 318



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/235 (33%), Positives = 113/235 (48%), Gaps = 25/235 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
           P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG     D    + P  
Sbjct: 134 PKVVRQLVSKTV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLR 191

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           ++ L    +     G +H+ ++++ G    +G N  GQLG     N   P+ ++ L +  
Sbjct: 192 LTTLLGIPLAAIACGGNHSFLISKSGAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRTLG 251

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPR 221
           V   ACG +F+V+L++  G     AG   YGQLGHG + NE                 PR
Sbjct: 252 VRFAACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---------------LPR 294

Query: 222 AIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            +  L G TI +VACG  HT+A V S+G VY +G G  G+LG R  K   +P+ V
Sbjct: 295 MVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQLGTRSTKSLMLPQVV 349



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 167/370 (45%), Gaps = 33/370 (8%)

Query: 19  GGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            G+ L+C GST    +G   G  D  +++P ++       ++ V+ G    H + +   G
Sbjct: 3   SGKELYCWGSTSHGQLGL-GGIEDEQILTPRQIPWTPDTAVQQVSCG--HRHTLFLTATG 59

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + Y  G N+  QLGH   +   RP ++ EL  Y I +   G  H++ +++ G  L++G N
Sbjct: 60  KVYACGSNDYSQLGH--DLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDN 117

Query: 138 KHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
             GQLG  + +  ++ P  VR LVS+ V   ACG + ++ L+S     + + G   YGQL
Sbjct: 118 DCGQLGHATEKEIVQLPKVVRQLVSKTVVQIACGNNHSLALTSC--GELYSWGSNIYGQL 175

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  + N+    +            P  +  L G  +  +ACG NH+  +   G V+ WG 
Sbjct: 176 GVNSPNDLTHCN-----------YPLRLTTLLGIPLAAIACGGNHSFLISKSGAVFGWGR 224

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQ----RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              G+LG  ++ +   P ++   +    R      E  +   +     T G G    +G+
Sbjct: 225 NNCGQLGLNDETNRAYPTQLKTLRTLGVRFAACGDEFSVFLTNEGGVFTCGAG---AYGQ 281

Query: 312 LKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYG 368
           L +    + M P+ +M+L G  +  +  GN H   FV +     ++G    G+L  G   
Sbjct: 282 LGHGFSSNEMLPRMVMELMGSTITQVACGNRHTLAFVPSRGKVYAFGLGSSGQL--GTRS 339

Query: 369 QKSSAMPKKV 378
            KS  +P+ V
Sbjct: 340 TKSLMLPQVV 349


>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
          Length = 531

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 23/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           ++P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  +
Sbjct: 63  LTPKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV 121

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VS 161
            + L   ++ +   G  H+V +  DG   A+G+N  GQ+GSGS  N+  P  V  CL + 
Sbjct: 122 CTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 181

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            V   ACG   T  ++ ++   +   G    GQLG G  N  N            Q  P 
Sbjct: 182 RVVGIACGQ--TSSMAVLDTGEVYGWGYNGNGQLGLG--NNVN------------QLTPV 225

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            +AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++ 
Sbjct: 226 RVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPTHIMV-EKE 284

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            V+   A  SA +  S+    GG +YMWG+ +
Sbjct: 285 RVVEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 100/235 (42%), Gaps = 24/235 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  L   KIK    G   H ++ TEDG   A+G N 
Sbjct: 44  FVFGLNYSNCLGTGDNQSTLTPKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+    I P  V    L+ +V   ACG+  +V L++     +   G    GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSVALAA--DGEVFAWGYNNCGQVG 161

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            G+                 QP PR +   L  + +V +ACG   ++AV   G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGY 207

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            G G+LG     ++  P RV       V      I  G  ++      G LY WG
Sbjct: 208 NGNGQLGLGNNVNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 136/309 (44%), Gaps = 36/309 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VTED     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTEDDEVFVFGLNYSNCLGTGDNQSTLTPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H+VA+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLS 329
               N L  + V  I+ G  +S      G++Y WG   N      N  + + P  +  L 
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALH 231

Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+ 
Sbjct: 232 SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPTHIMVEKERVVE 288

Query: 389 V-ACGYGHS 396
           + AC   H+
Sbjct: 289 IAACHSAHT 297



 Score = 41.2 bits (95), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     PT
Sbjct: 220 NQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPT 277

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDG 129
            +    +  ++ A    +HT      G
Sbjct: 278 HIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 279

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  +R L G+ I+ ++  C  CHC+AV +E +  +WGRN+ G+
Sbjct: 91  WGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS--CGDCHCLAVTMENKVLSWGRNQNGE 148

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +      +IK   AG  H+V +TEDG+   +GW ++G LG G   +
Sbjct: 149 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 208

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            + P  V     ++   +CG   T+ +SS  G  +   G  +YGQLGHG           
Sbjct: 209 RLIPEKVNIDGDKIVMVSCGWRHTISISSSGG--LYTHGWSKYGQLGHGD---------- 256

Query: 210 VKLAYEAQPRPRAIAALAGETIVKV 234
               +E    PR + AL+ + I +V
Sbjct: 257 ----FEDCLVPRKVQALSDKLISQV 277



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 130/280 (46%), Gaps = 31/280 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +  ++AG  + H VA+       +WGR E GQLGHGD   R  PT +S      I     
Sbjct: 14  VLLISAG--ASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTC 71

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G  +TV  ++ G  + ++GW   G+LG G   +   P P+R L    +   +CG D    
Sbjct: 72  GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCG-DCHCL 130

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             ++E   +L+ G  Q G+LG GT     TKDS V         P+ I A  G  I  VA
Sbjct: 131 AVTMEN-KVLSWGRNQNGELGLGT-----TKDSHV---------PQKILAFEGIRIKMVA 175

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H+VA+   G +Y WG+G YG LG  +  D  +P +V++     V+     +S G  
Sbjct: 176 AGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVM-----VSCGWR 230

Query: 296 NSSCTAGGGQLYM--WGKLKNNG----DDWMYPKPLMDLS 329
           ++   +  G LY   W K    G    +D + P+ +  LS
Sbjct: 231 HTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALS 270



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 21/234 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
           PT+L    G DI  V+  C + + VA    G+  Y+WG  + G+LGHGD      P  + 
Sbjct: 55  PTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 112

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   +IK+   G  H + VT +   L++G N++G+LG G+ ++   P  +       + 
Sbjct: 113 ALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 172

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ +V ++  E   +   G  +YG LG G  N+        +L  E         
Sbjct: 173 MVAAGAEHSVAIT--EDGDLYGWGWGRYGNLGLGDTND--------RLIPEK-------V 215

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            + G+ IV V+CG  HT+++ S G +YT G+  YG+LGH + +D  VPR+V   
Sbjct: 216 NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 269



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 36/261 (13%)

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           I +E   SP   L+      + GA  TV L  + G  + + G  + GQLGHG     +T 
Sbjct: 3   IMSEKSASPPHVLL-----ISAGASHTVAL--LTGNVVCSWGRGEDGQLGHG-----DTD 50

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY-VYTWGFGGYGRLGHRE 265
           D  +         P  ++A  G+ IV V CG ++TVA    G  VY+WG+G +GRLGH +
Sbjct: 51  DRLL---------PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGD 101

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDW 319
             D ++P  +   Q   +      IS G  +        ++  WG+ +N         D 
Sbjct: 102 PSDLFIPHPIRALQGLRI----KQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDS 157

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
             P+ ++   G  ++ + +G  H   +  D     WG  +YG LG G    +   +P+KV
Sbjct: 158 HVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR--LIPEKV 215

Query: 379 DILEGMHVISVACGYGHSLVI 399
           +I +G  ++ V+CG+ H++ I
Sbjct: 216 NI-DGDKIVMVSCGWRHTISI 235



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/274 (27%), Positives = 128/274 (46%), Gaps = 30/274 (10%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVW 175
           AG SHTV +       ++G  + GQLG G   + + P+ +      ++ +  CGAD+TV 
Sbjct: 19  AGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV- 77

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             S  G  + + G   +G+LGHG  ++                 P  I AL G  I +++
Sbjct: 78  ARSKSGKDVYSWGWGDFGRLGHGDPSDLFI--------------PHPIRALQGLRIKQIS 123

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG  H +AV  +  V +WG    G LG    KD  VP+++  F+   +     +++AG+ 
Sbjct: 124 CGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRI----KMVAAGAE 179

Query: 296 NSSCTAGGGQLYMWG--KLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           +S      G LY WG  +  N G    +D + P+ + ++ G  +  +  G  H   + + 
Sbjct: 180 HSVAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSS 238

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
               + G ++YG+LG+G +  +   +P+KV  L 
Sbjct: 239 GGLYTHGWSKYGQLGHGDF--EDCLVPRKVQALS 270



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 88/178 (49%), Gaps = 12/178 (6%)

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           ++ ++ G +HTVA+ +   V +WG G  G+LGH +  D  +P ++  F   +++   +V 
Sbjct: 14  VLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIV---SVT 70

Query: 291 SAGSVNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF 344
                  + +  G  +Y WG        +GD  D   P P+  L G  ++ +  G+ H  
Sbjct: 71  CGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCL 130

Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            V  ++  +SWG  Q GELG G    K S +P+K+   EG+ +  VA G  HS+ I +
Sbjct: 131 AVTMENKVLSWGRNQNGELGLGT--TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 186



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 11/138 (7%)

Query: 277 VFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLS 329
           +    +  PP  + ISAG+ ++     G  +  WG+ ++      + DD + P  L    
Sbjct: 3   IMSEKSASPPHVLLISAGASHTVALLTGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFD 62

Query: 330 GWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
           G ++  +  G  +    + S     SWG   +G LG+G        +P  +  L+G+ + 
Sbjct: 63  GQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGD--PSDLFIPHPIRALQGLRIK 120

Query: 388 SVACGYGHSLVIVDRTNV 405
            ++CG  H L +     V
Sbjct: 121 QISCGDCHCLAVTMENKV 138


>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Meleagris gallopavo]
          Length = 1056

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 34/282 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
           +I+ V   C   H +A+      ++WG+N+ GQLG G + ++ + P ++  L      + 
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L   +V    CG D T 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSLVTQ 298

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP--PEAVI 290
           + CG  HT A V S G +Y++G GG G+LG     +   P  V    + N LP   + +I
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGNWLPYSTQCLI 354

Query: 291 SAGSVNSSCT----AGGGQL---YMWGKLKNNGDDWMYPKPL 325
            A S    C     +GG Q    Y + +     DD+ YP  L
Sbjct: 355 PADSEQYYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 146/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-LNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKA 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R RP  V  L    I     G +HT+ + + G   A+G    GQLG       I  P  +
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  +G+ + + G  +YGQLG G +             Y+
Sbjct: 132 KSLSEIQIVQVACGYYHSLALS--KGSEVFSWGQNKYGQLGLGYE-------------YK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P  I +L G    ++A G  H+  +   G ++ WG   +G+LG  +  D +VP  +
Sbjct: 177 KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   V+          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +I+  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
           GQLG    R    P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           GT+              E    PR I +L+   IV+VACG  H++A+     V++WG   
Sbjct: 120 GTE--------------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   E K +  P  +    ++ +  P A I+AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  + CG  H+   V
Sbjct: 282 EIN--PRKVFELMGSLVTQITCGRQHTTAFV 310



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  EI   P +    L   +    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +A+ RP  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WG    G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVF 159

Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
            WG+ K    G  + Y     P  +  L G     + +G  H FV   S  I  WG  ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG          +P  +  L    V+ + CG  H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRTQKVVHICCGEDHT 254


>gi|444910521|ref|ZP_21230705.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719140|gb|ELW59939.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 715

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 157/347 (45%), Gaps = 41/347 (11%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA    + H +A+   G   +WG N  GQLG+G       P  VS L+   IK   AG +
Sbjct: 207 VAISAGAAHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGLNN--IKSLAAGGN 264

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           H++ +  DG   A+G+N +GQ+G+G+  N + P  V  L S VTA + G   +  + S  
Sbjct: 265 HSLALKSDGTVTAWGYNAYGQVGNGATANVLSPIAVSTL-SGVTAVSAGVSHSHAIGSSN 323

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G  I   GL  YG LG+ T    +T              P  I   +G  +  VA G  H
Sbjct: 324 GV-IWGWGLNTYGGLGNNTKVNRST--------------PGTILLTSG--LQGVAGGAQH 366

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           T+ V   G V+ WG   YG++G     D    RR+   Q  + L     ++AG+ +S   
Sbjct: 367 TIYVKGDGTVWAWGSNTYGQIG-----DGTPLRRLTPVQL-STLTGIIAVAAGANHSLAL 420

Query: 301 AGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI 352
           A  G ++ WG+  N+G        +   P  + +L+G  +  + +G  H   +  D +  
Sbjct: 421 AANGTVFAWGR-NNHGQLGDGSTTNRSLPTQVPNLTG--IVALAAGATHSLALRFDGTVY 477

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +WG    G+LG      + S  P  V  LE   V++++ G  HSL I
Sbjct: 478 AWGRNHLGQLGDETCTDRLS--PVAVHYLE--KVVAISAGDNHSLAI 520



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 165/360 (45%), Gaps = 49/360 (13%)

Query: 50  LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
           L PL   D+  +AAG  + H +A+   G  ++WG N  GQLG+G    +        L+ 
Sbjct: 150 LSPLT--DVVAIAAG--THHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTD 205

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
                AGA  +H++ +  +G  +++G N +GQLG+G+      P  V  L + + + A G
Sbjct: 206 AVAISAGA--AHSLALRANGAVVSWGANTYGQLGNGTTTTSASPVGVSGL-NNIKSLAAG 262

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
            + ++ L S    ++   G   YGQ+G+G              A      P A++ L+G 
Sbjct: 263 GNHSLALKS--DGTVTAWGYNAYGQVGNG--------------ATANVLSPIAVSTLSG- 305

Query: 230 TIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
            +  V+ G +H+ A+  S G ++ WG   YG LG+  + +   P          +L    
Sbjct: 306 -VTAVSAGVSHSHAIGSSNGVIWGWGLNTYGGLGNNTKVNRSTP--------GTILLTSG 356

Query: 289 V--ISAGSVNSSCTAGGGQLYMWGK--LKNNGDDW----MYPKPLMDLSGWNLRCMDSGN 340
           +  ++ G+ ++    G G ++ WG       GD      + P  L  L+G  +  + +G 
Sbjct: 357 LQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDGTPLRRLTPVQLSTLTG--IIAVAAGA 414

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            H   + A+ +  +WG   +G+LG G    +S  +P +V  L G  ++++A G  HSL +
Sbjct: 415 NHSLALAANGTVFAWGRNNHGQLGDGSTTNRS--LPTQVPNLTG--IVALAAGATHSLAL 470



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 152/358 (42%), Gaps = 40/358 (11%)

Query: 28  TCW--DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
           T W  +A G+       N++SP  +  L GV    V+AG    H +     G  + WG N
Sbjct: 276 TAWGYNAYGQVGNGATANVLSPIAVSTLSGV--TAVSAGVSHSHAIGSS-NGVIWGWGLN 332

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
             G LG+  K+ R  P  +  L    ++    G  HT+ V  DG   A+G N +GQ+G G
Sbjct: 333 TYGGLGNNTKVNRSTPGTI--LLTSGLQGVAGGAQHTIYVKGDGTVWAWGSNTYGQIGDG 390

Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           +    + P  +  L + + A A GA+ ++ L++    ++   G   +GQLG G+      
Sbjct: 391 TPLRRLTPVQLSTL-TGIIAVAAGANHSLALAA--NGTVFAWGRNNHGQLGDGSTTN--- 444

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                      +  P  +  L G  IV +A G  H++A+   G VY WG    G+LG   
Sbjct: 445 -----------RSLPTQVPNLTG--IVALAAGATHSLALRFDGTVYAWGRNHLGQLGDET 491

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWM 320
             D   P  V   ++         ISAG  +S      G  + WG     +L ++G    
Sbjct: 492 CTDRLSPVAVHYLEK------VVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSG 545

Query: 321 YPKPLMD-LSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQKSSAMP 375
              PL+  + G       +   +H +  +++  +W  G   YG+LG G    KS+ +P
Sbjct: 546 RFSPLISQIPGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVP 603



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 143/342 (41%), Gaps = 42/342 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +AV  +G  +  G N  G+LG+G       P  VS L+   +    AG  H++ +  D
Sbjct: 7   HTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTG--VISVAAGYYHSLALKSD 64

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADFTVWLSSVEG 181
           G   A+G N +G LG  +     +P  V  L   +        + A  +D TVW     G
Sbjct: 65  GTVWAWGLNTYGNLGDNTTTTRTKPVQVLNLTGVIAIAADYYQSFALKSDGTVWSWGYNG 124

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S L                  N   ++ KL  + Q     I +   + +V +A GT+HT
Sbjct: 125 NSALG-----------------NASPATQKLPAQVQQSFGGILSPLTD-VVAIAAGTHHT 166

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A+ S G V++WG    G+LG+       +  +    Q  N L     ISAG+ +S    
Sbjct: 167 LALKSNGTVWSWGLNSSGQLGNGT-----LATQSAAVQAVN-LTDAVAISAGAAHSLALR 220

Query: 302 GGGQLYMWGKLK----NNGDDWMYPKPLMDLSGW-NLRCMDSGNMHHF-VGADSSCISWG 355
             G +  WG        NG       P + +SG  N++ + +G  H   + +D +  +WG
Sbjct: 221 ANGAVVSWGANTYGQLGNGTTTTSASP-VGVSGLNNIKSLAAGGNHSLALKSDGTVTAWG 279

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           +  YG++G G      S  P  V  L G+  +S    + H++
Sbjct: 280 YNAYGQVGNGATANVLS--PIAVSTLSGVTAVSAGVSHSHAI 319



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 28/266 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P +L  L G  I  VAAG    H +A+   G  + WGRN  GQLG G    R  PT V
Sbjct: 396 LTPVQLSTLTG--IIAVAAGA--NHSLALAANGTVFAWGRNNHGQLGDGSTTNRSLPTQV 451

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L+   I    AG +H++ +  DG   A+G N  GQLG  +  + + P  V  L  +V 
Sbjct: 452 PNLT--GIVALAAGATHSLALRFDGTVYAWGRNHLGQLGDETCTDRLSPVAVHYL-EKVV 508

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A + G + +  L+  +  +    G  ++GQL        ++   S + +      P  + 
Sbjct: 509 AISAGDNHS--LAIHQNGTAFAWGSDEHGQL-------CDSGSGSGRFSPLISQIPGIVK 559

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
                  + +A G NHT+ +++ G  +  G   YG+LG     D+  P  +        L
Sbjct: 560 G------IGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVPI------TTL 607

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
              A ++AG   S+     G +  WG
Sbjct: 608 TNAARLAAGGNTSAALTTNGTVSTWG 633



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 129/297 (43%), Gaps = 46/297 (15%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGA 170
           G  HT+ V +DG   A G+N HG+LG+G+  + + P  V  L   ++       + A  +
Sbjct: 4   GAHHTLAVRQDGTVWASGYNYHGELGNGTATDSLSPVQVSNLTGVISVAAGYYHSLALKS 63

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           D TVW            GL  YG LG   DN   T+            +P  +  L G  
Sbjct: 64  DGTVWA----------WGLNTYGNLG---DNTTTTRT-----------KPVQVLNLTG-- 97

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-- 288
           ++ +A     + A+ S G V++WG+ G   LG+     + +P +V       +L P    
Sbjct: 98  VIAIAADYYQSFALKSDGTVWSWGYNGNSALGNASPATQKLPAQVQQ-SFGGILSPLTDV 156

Query: 289 -VISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
             I+AG+ ++      G ++ WG   +    NG        +  ++  +   + +G  H 
Sbjct: 157 VAIAAGTHHTLALKSNGTVWSWGLNSSGQLGNGTLATQSAAVQAVNLTDAVAISAGAAHS 216

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             + A+ + +SWG   YG+LG G     +SA P  V  L   ++ S+A G  HSL +
Sbjct: 217 LALRANGAVVSWGANTYGQLGNGT--TTTSASPVGVSGLN--NIKSLAAGGNHSLAL 269



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/226 (27%), Positives = 100/226 (44%), Gaps = 13/226 (5%)

Query: 49  RLRPL-VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL-GHGDKIQRDRPTIVSE 106
           RL P+ V    + VA      H +A+   G  + WG +E GQL   G    R  P I   
Sbjct: 495 RLSPVAVHYLEKVVAISAGDNHSLAIHQNGTAFAWGSDEHGQLCDSGSGSGRFSPLISQI 554

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
               K     AG +HT+++  +G + A G N +GQLG G+  ++  P P+  L +     
Sbjct: 555 PGIVKGIGIAAGANHTLLLEANGTAWACGDNLYGQLGDGTTTDKSAPVPITTL-TNAARL 613

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G + +  L++    ++   GL   GQLG   DN   ++ +   +     P     + +
Sbjct: 614 AAGGNTSAALTT--NGTVSTWGLNSSGQLG---DNTTASRTTIAPVLRTVYPTVEVFSGV 668

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           A      +  GT H  AV + GYV++WG    G++G     +  +P
Sbjct: 669 A-----SLGAGTAHLTAVKTDGYVHSWGLNDSGQIGDGTLVNRPLP 709



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 58/154 (37%), Gaps = 23/154 (14%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD--IRFVAAGCVSCHCVAVD 74
           E  G    CG   +  +G      DG     +   P+  +    R  A G  S    A+ 
Sbjct: 574 EANGTAWACGDNLYGQLG------DGTTTDKSAPVPITTLTNAARLAAGGNTSA---ALT 624

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY--------KIKKAGAGRSHTVVVT 126
             G   TWG N  GQLG  D     R TI   L            +   GAG +H   V 
Sbjct: 625 TNGTVSTWGLNSSGQLG--DNTTASRTTIAPVLRTVYPTVEVFSGVASLGAGTAHLTAVK 682

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
            DG   ++G N  GQ+G G++ N   P P   L+
Sbjct: 683 TDGYVHSWGLNDSGQIGDGTLVN--RPLPTAALL 714


>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
           [Cucumis sativus]
          Length = 302

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 21/234 (8%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WGRN+ GQLG G       P  +       IK   AG  HT  VTEDG    +GW ++G 
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGELFGWGWGRYGN 60

Query: 142 LGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG G   + + P  V  +  + +   ACG   T+ +SS+ G  +   G  +YGQLGHG  
Sbjct: 61  LGLGDRNDRLVPQKVSSVDGDKMVMVACGWRHTISVSSLGG--LYTYGWSKYGQLGHGD- 117

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
                        +E +  P  + AL G+ I +++ G  HT+A+ + G +Y WG+  +G+
Sbjct: 118 -------------FEDRLVPHRLEALRGDNISQISGGWRHTMALTTDGKLYGWGWNKFGQ 164

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
           +G  +  D   P ++   Q   V+     IS G  ++        ++ WG+  N
Sbjct: 165 VGAGDNIDHCSPIQIKFPQDQKVIQ----ISCGWRHTLAVTDKQNVFSWGRGTN 214



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 114/236 (48%), Gaps = 20/236 (8%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  + +LV P +++   G+ I+ VAAG    H  AV  +G  + WG    G LG GD+  
Sbjct: 12  GTTEDSLV-PQKIQAFEGISIKMVAAGAE--HTAAVTEDGELFGWGWGRYGNLGLGDRND 68

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  VS +   K+     G  HT+ V+  G    +GW+K+GQLG G   + + P  + 
Sbjct: 69  RLVPQKVSSVDGDKMVMVACGWRHTISVSSLGGLYTYGWSKYGQLGHGDFEDRLVPHRLE 128

Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            L  + ++  + G   T+ L++     +   G  ++GQ+G G + ++ +           
Sbjct: 129 ALRGDNISQISGGWRHTMALTT--DGKLYGWGWNKFGQVGAGDNIDHCS----------- 175

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
              P  I     + +++++CG  HT+AV  K  V++WG G  G+LGH E  D   P
Sbjct: 176 ---PIQIKFPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQLGHGESVDRNTP 228



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/273 (25%), Positives = 122/273 (44%), Gaps = 68/273 (24%)

Query: 134 FGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQY 192
           +G N++GQLG G+  + + P  ++      +   A GA+ T   +  E   +   G  +Y
Sbjct: 1   WGRNQNGQLGLGTTEDSLVPQKIQAFEGISIKMVAAGAEHTA--AVTEDGELFGWGWGRY 58

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G LG G  N+        +L       P+ ++++ G+ +V VACG  HT++V S G +YT
Sbjct: 59  GNLGLGDRND--------RLV------PQKVSSVDGDKMVMVACGWRHTISVSSLGGLYT 104

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           +G+  YG+LGH + +D  VP R++  + +N+    + IS G  ++      G+LY W   
Sbjct: 105 YGWSKYGQLGHGDFEDRLVPHRLEALRGDNI----SQISGGWRHTMALTTDGKLYGW--- 157

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS 372
                            GWN                         ++G++G G      S
Sbjct: 158 -----------------GWN-------------------------KFGQVGAGDNIDHCS 175

Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             P ++   +   VI ++CG+ H+L + D+ NV
Sbjct: 176 --PIQIKFPQDQKVIQISCGWRHTLAVTDKQNV 206



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 2/79 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+     + +  SP +++     D + +   C   H +AV  +   ++WGR   GQ
Sbjct: 159 WNKFGQVGAGDNIDHCSPIQIK--FPQDQKVIQISCGWRHTLAVTDKQNVFSWGRGTNGQ 216

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LGHG+ + R+ P I+  LS
Sbjct: 217 LGHGESVDRNTPMILEALS 235


>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Meleagris gallopavo]
          Length = 1048

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 34/282 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
           +I+ V   C   H +A+      ++WG+N+ GQLG G + ++ + P ++  L      + 
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L   +V    CG D T 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSLVTQ 298

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP--PEAVI 290
           + CG  HT A V S G +Y++G GG G+LG     +   P  V    + N LP   + +I
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGNWLPYSTQCLI 354

Query: 291 SAGSVNSSCT----AGGGQL---YMWGKLKNNGDDWMYPKPL 325
            A S    C     +GG Q    Y + +     DD+ YP  L
Sbjct: 355 PADSEQYYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 145/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH     
Sbjct: 15  GGIDEEIVLEPRKSDFF-LNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGHEKA-- 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R RP  V  L    I     G +HT+ + + G   A+G    GQLG       I  P  +
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  +G+ + + G  +YGQLG G +             Y+
Sbjct: 132 KSLSEIQIVQVACGYYHSLALS--KGSEVFSWGQNKYGQLGLGYE-------------YK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P  I +L G    ++A G  H+  +   G ++ WG   +G+LG  +  D +VP  +
Sbjct: 177 KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   V+          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +I+  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
           GQLG    R    P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           GT+              E    PR I +L+   IV+VACG  H++A+     V++WG   
Sbjct: 120 GTE--------------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   E K +  P  +    ++ +  P A I+AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  + CG  H+   V
Sbjct: 282 EIN--PRKVFELMGSLVTQITCGRQHTTAFV 310



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  EI   P +    L   +    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +A+ RP  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WG    G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVF 159

Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
            WG+ K    G  + Y     P  +  L G     + +G  H FV   S  I  WG  ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG          +P  +  L    V+ + CG  H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRTQKVVHICCGEDHT 254


>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
           gallus]
          Length = 1056

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 127/282 (45%), Gaps = 34/282 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
           +I+ V   C   H +A+      ++WG+N+ GQLG G + ++ + P ++  L      + 
Sbjct: 136 EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L   +V    CG D T 
Sbjct: 196 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSLVTQ 298

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP--PEAVI 290
           + CG  HT A V S G +Y++G GG G+LG     +   P  V    + N LP   + +I
Sbjct: 299 ITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGNWLPYSTQCLI 354

Query: 291 SAGSVNSSCT----AGGGQL---YMWGKLKNNGDDWMYPKPL 325
            A S    C     +GG Q    Y + +     DD+ YP  L
Sbjct: 355 PADSEQYYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLL 396



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 146/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-LNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKA 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R RP  V  L    I     G +HT+ + + G   A+G    GQLG       I  P  +
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  +G+ + + G  +YGQLG G +             Y+
Sbjct: 132 KSLSEIQIVQVACGYYHSLALS--KGSEVFSWGQNKYGQLGLGYE-------------YK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P  I +L G    ++A G  H+  +   G ++ WG   +G+LG  +  D +VP  +
Sbjct: 177 KQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   V+          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSLVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +I+  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
           GQLG    R    P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           GT+              E    PR I +L+   IV+VACG  H++A+     V++WG   
Sbjct: 120 GTE--------------ECIRVPRNIKSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   E K +  P  +    ++ +  P A I+AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGYEYKKQNSPHVI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDDNDRYVPTLLKSLRTQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  + CG  H+   V
Sbjct: 282 EIN--PRKVFELMGSLVTQITCGRQHTTAFV 310



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 118/277 (42%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  EI   P +    L   +    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +A+ RP  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WG    G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECIRVPRNIKSLSEIQIVQ----VACGYYHSLALSKGSEVF 159

Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQY 359
            WG+ K    G  + Y     P  +  L G     + +G  H FV   S  I  WG  ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG          +P  +  L    V+ + CG  H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRTQKVVHICCGEDHT 254


>gi|195014693|ref|XP_001984062.1| GH15214 [Drosophila grimshawi]
 gi|193897544|gb|EDV96410.1| GH15214 [Drosophila grimshawi]
          Length = 1052

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 93/332 (28%), Positives = 152/332 (45%), Gaps = 32/332 (9%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       + +   G  HT+ +T  G   A G N
Sbjct: 4   YCWGNASHGQLGLGGIEDEQILTPSKMPWQPDSAVNQIACGHRHTLFLTASGKVYACGSN 63

Query: 138 KHGQLGS--GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            + QLG    S R    P  V C+++++   ACG+  ++ L+  E   +L+ G  + GQL
Sbjct: 64  DYAQLGHELSSKRPLQIPELVDCVITQI---ACGSRHSMALT--EWGQVLSWGDNECGQL 118

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           GH +D +       V+L       P+ + AL  +T+V++ACG NH++A+   G +Y WG 
Sbjct: 119 GHASDQDV------VQL-------PKTVRALVSKTVVQIACGNNHSLALTCCGELYAWGS 165

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK-- 313
             YG+LG +    E       +     +  P   I+ G  +S   +    ++ WG+    
Sbjct: 166 NIYGQLGVK-TPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCG 224

Query: 314 ----NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYG 368
               N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+LG+G  G
Sbjct: 225 QLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCG 284

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +   +P+ V  L G  +  VACG  H+L +V
Sbjct: 285 NE--MLPRMVMELMGSTISQVACGNRHTLAMV 314



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 123/251 (49%), Gaps = 30/251 (11%)

Query: 34  GRRKGALDGNLVS-PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG- 91
           G+   A D ++V  P  +R LV   +  V   C + H +A+   G  Y WG N  GQLG 
Sbjct: 116 GQLGHASDQDVVQLPKTVRALVSKTV--VQIACGNNHSLALTCCGELYAWGSNIYGQLGV 173

Query: 92  --HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSI 147
               +  Q + P +++ L    ++    G +H+ ++++  +S  FGW  N  GQLG    
Sbjct: 174 KTPSELGQCNAPMLLTTLLGIPVRAIACGGNHSFLISK--SSAVFGWGRNNCGQLGLNDE 231

Query: 148 RNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNT 205
            N   P+ ++ L +  V   ACG +F+V+L++  G     AG   YGQLGHG   NE   
Sbjct: 232 TNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFCGNEM-- 287

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHR 264
                         PR +  L G TI +VACG  HT+A V ++G +Y +G G  G+LG R
Sbjct: 288 -------------LPRMVMELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQLGTR 334

Query: 265 EQKDEWVPRRV 275
             K   +P+ V
Sbjct: 335 NTKSLNLPQMV 345



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 158/354 (44%), Gaps = 39/354 (11%)

Query: 38  GALDGNLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
           G  D  +++P+++  +P   V+       C   H + +   G+ Y  G N+  QLGH  +
Sbjct: 18  GIEDEQILTPSKMPWQPDSAVN----QIACGHRHTLFLTASGKVYACGSNDYAQLGH--E 71

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PS 154
           +   RP  + EL    I +   G  H++ +TE G  L++G N+ GQLG  S ++ ++ P 
Sbjct: 72  LSSKRPLQIPELVDCVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVVQLPK 131

Query: 155 PVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            VR LVS+ V   ACG + ++ L+      +   G   YGQLG  T +E    ++     
Sbjct: 132 TVRALVSKTVVQIACGNNHSLALTCC--GELYAWGSNIYGQLGVKTPSELGQCNA----- 184

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P  +  L G  +  +ACG NH+  +     V+ WG    G+LG  ++ +   P 
Sbjct: 185 ------PMLLTTLLGIPVRAIACGGNHSFLISKSSAVFGWGRNNCGQLGLNDETNRAYPT 238

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNN--GDDWMYPKPLM 326
           ++   +   V      ++ G   S      G ++      +G+L +   G++ M P+ +M
Sbjct: 239 QLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFCGNE-MLPRMVM 293

Query: 327 DLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           +L G  +  +  GN H    V A      +G    G+L  G    KS  +P+ V
Sbjct: 294 ELMGSTISQVACGNRHTLAMVPARGRIYGFGLGSSGQL--GTRNTKSLNLPQMV 345



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 81/178 (45%), Gaps = 4/178 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G +  +  G   +P  L  L+G+ +R +A G    H   +      
Sbjct: 158 GELYAWGSNIYGQLGVKTPSELGQCNAPMLLTTLLGIPVRAIACG--GNHSFLISKSSAV 215

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WGRN  GQLG  D+  R  PT +  L    ++    G   +V +T +G     G   +
Sbjct: 216 FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 275

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           GQLG G   NE+ P  V  L+ S ++  ACG   T+ +    G  I   GL   GQLG
Sbjct: 276 GQLGHGFCGNEMLPRMVMELMGSTISQVACGNRHTLAMVPARG-RIYGFGLGSSGQLG 332


>gi|302807678|ref|XP_002985533.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
 gi|300146739|gb|EFJ13407.1| hypothetical protein SELMODRAFT_122484 [Selaginella moellendorffii]
          Length = 228

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 17/199 (8%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           ++ FV   C S H +A+   G  Y++G+   G LGHG       P IV  L    I +  
Sbjct: 34  ELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIA 93

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
            G +H+  +T +G   ++G  K+GQLG GS+ N ++P PV  L    +T   CGAD+T+ 
Sbjct: 94  CGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           + S     + + G   +GQ GHGT +                  P+ + +L  + IV+ +
Sbjct: 154 IDS--DGQLFSWGHGHWGQTGHGTQDNILV--------------PKLVCSLENDNIVQAS 197

Query: 236 CGTNHTVAVDSKGYVYTWG 254
            G  H VA+ S G VY WG
Sbjct: 198 AGARHAVALTSGGGVYAWG 216



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 24/234 (10%)

Query: 81  TWGRNERGQLGHGDK---IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           +WG  E GQLG  D         P  +    +    +   G SHT+ +T  G+  +FG  
Sbjct: 3   SWGCGEFGQLGLKDAAGVFNSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQG 62

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             G LG G+  +   P  V  L    +   ACG + +  L+ VEG  + + G  +YGQLG
Sbjct: 63  TFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT-VEG-QLFSWGRGKYGQLG 120

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            G+               E   +P  + AL+   + +V CG ++T+A+DS G +++WG G
Sbjct: 121 CGS--------------VENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHG 166

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            +G+ GH  Q +  VP+ V   + +N++      SAG+ ++     GG +Y WG
Sbjct: 167 HWGQTGHGTQDNILVPKLVCSLENDNIVQA----SAGARHAVALTSGGGVYAWG 216



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 24/224 (10%)

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +++ G  ++GQLG         KD++        P PR +        V+VACG++HT+A
Sbjct: 1   LVSWGCGEFGQLG--------LKDAA---GVFNSPLPRFLRGSRELLFVRVACGSSHTLA 49

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           +   G VY++G G +G LGH   +    P  VD      ++     I+ G  +S      
Sbjct: 50  LTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQ----IACGDNHSCALTVE 105

Query: 304 GQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
           GQL+ WG+ K       + ++ + P P+  LS   L  +  G  +   + +D    SWGH
Sbjct: 106 GQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGH 165

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +G+ G+G   Q +  +PK V  LE  +++  + G  H++ + 
Sbjct: 166 GHWGQTGHGT--QDNILVPKLVCSLENDNIVQASAGARHAVALT 207



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C + + +A+D +G+ ++WG    GQ GHG +     P +V  L    I +A AG  H V 
Sbjct: 146 CGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVA 205

Query: 125 VTEDGNSLAFGWNKHGQL 142
           +T  G   A+G N+ GQ+
Sbjct: 206 LTSGGGVYAWGDNEQGQV 223


>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 316

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  +R L G+ I+ ++  C  CHC+AV +E +  +WGRN+ G+
Sbjct: 128 WGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS--CGDCHCLAVTMENKVLSWGRNQNGE 185

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +      +IK   AG  H+V +TEDG+   +GW ++G LG G   +
Sbjct: 186 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 245

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            + P  V     ++   +CG   T+ +SS  G  +   G  +YGQLGHG           
Sbjct: 246 RLIPEKVNIDGDKIVMVSCGWRHTISISSSGG--LYTHGWSKYGQLGHGD---------- 293

Query: 210 VKLAYEAQPRPRAIAALAGETIVKV 234
               +E    PR + AL+ + I +V
Sbjct: 294 ----FEDCLVPRKVQALSDKLISQV 314



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 126/274 (45%), Gaps = 30/274 (10%)

Query: 65  CVSCHCVAVDVEGRCY-TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
           C   +  AV+  G    +WGR E GQLGHGD   R  PT +S      I     G  +TV
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV 114

Query: 124 VVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
             ++ G  + ++GW   G+LG G   +   P P+R L    +   +CG D      ++E 
Sbjct: 115 ARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCG-DCHCLAVTMEN 173

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +L+ G  Q G+LG GT     TKDS V         P+ I A  G  I  VA G  H+
Sbjct: 174 -KVLSWGRNQNGELGLGT-----TKDSHV---------PQKILAFEGIRIKMVAAGAEHS 218

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           VA+   G +Y WG+G YG LG  +  D  +P +V++     V+     +S G  ++   +
Sbjct: 219 VAITEDGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDKIVM-----VSCGWRHTISIS 273

Query: 302 GGGQLYM--WGKLKNNG----DDWMYPKPLMDLS 329
             G LY   W K    G    +D + P+ +  LS
Sbjct: 274 SSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQALS 307



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 21/234 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
           PT+L    G DI  V+  C + + VA    G+  Y+WG  + G+LGHGD      P  + 
Sbjct: 92  PTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 149

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   +IK+   G  H + VT +   L++G N++G+LG G+ ++   P  +       + 
Sbjct: 150 ALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 209

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ +V ++  E   +   G  +YG LG G  N+        +L  E         
Sbjct: 210 MVAAGAEHSVAIT--EDGDLYGWGWGRYGNLGLGDTND--------RLIPEK-------V 252

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            + G+ IV V+CG  HT+++ S G +YT G+  YG+LGH + +D  VPR+V   
Sbjct: 253 NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 306



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 130/291 (44%), Gaps = 45/291 (15%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AG SHTV +      L+  +     L    I   + P   R L S+V A+A         
Sbjct: 19  AGASHTVAL------LSKQFESSEMLARFLISTPLLPESWR-LCSKVNASAV-------- 63

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            +  G  + + G  + GQLGHG     +T D  +         P  ++A  G+ IV V C
Sbjct: 64  -NFPGNVVCSWGRGEDGQLGHG-----DTDDRLL---------PTKLSAFDGQDIVSVTC 108

Query: 237 GTNHTVAVDSKGY-VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           G ++TVA    G  VY+WG+G +GRLGH +  D ++P  +   Q   +      IS G  
Sbjct: 109 GADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRI----KQISCGDC 164

Query: 296 NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGAD 348
           +        ++  WG+ +N         D   P+ ++   G  ++ + +G  H   +  D
Sbjct: 165 HCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITED 224

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                WG  +YG LG G    +   +P+KV+I +G  ++ V+CG+ H++ I
Sbjct: 225 GDLYGWGWGRYGNLGLGDTNDR--LIPEKVNI-DGDKIVMVSCGWRHTISI 272



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 30/257 (11%)

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           ++G  + GQLG G   + + P+ +      ++ +  CGAD+TV   S  G  + + G   
Sbjct: 72  SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV-ARSKSGKDVYSWGWGD 130

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +G+LGHG  ++                 P  I AL G  I +++CG  H +AV  +  V 
Sbjct: 131 FGRLGHGDPSDLFI--------------PHPIRALQGLRIKQISCGDCHCLAVTMENKVL 176

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
           +WG    G LG    KD  VP+++  F+   +     +++AG+ +S      G LY WG 
Sbjct: 177 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRI----KMVAAGAEHSVAITEDGDLYGWGW 232

Query: 311 -KLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
            +  N G    +D + P+ + ++ G  +  +  G  H   + +     + G ++YG+LG+
Sbjct: 233 GRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGH 291

Query: 365 GPYGQKSSAMPKKVDIL 381
           G +  +   +P+KV  L
Sbjct: 292 GDF--EDCLVPRKVQAL 306



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 13/174 (7%)

Query: 236 CGTNHTVAVDSKGYVY-TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           C   +  AV+  G V  +WG G  G+LGH +  D  +P ++  F   +++   +V     
Sbjct: 55  CSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIV---SVTCGAD 111

Query: 295 VNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
              + +  G  +Y WG        +GD  D   P P+  L G  ++ +  G+ H   V  
Sbjct: 112 YTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           ++  +SWG  Q GELG G    K S +P+K+   EG+ +  VA G  HS+ I +
Sbjct: 172 ENKVLSWGRNQNGELGLGT--TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 223



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 41/184 (22%), Positives = 74/184 (40%), Gaps = 31/184 (16%)

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           ++ ++ G +HTVA+ SK +                +  E + R    F  +  L PE+  
Sbjct: 14  VLLISAGASHTVALLSKQF----------------ESSEMLAR----FLISTPLLPESWR 53

Query: 291 SAGSVNSSCTAGGGQLY-MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
               VN+S     G +   WG+ ++      + DD + P  L    G ++  +  G  + 
Sbjct: 54  LCSKVNASAVNFPGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYT 113

Query: 344 FVGADS--SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              + S     SWG   +G LG+G        +P  +  L+G+ +  ++CG  H L +  
Sbjct: 114 VARSKSGKDVYSWGWGDFGRLGHGD--PSDLFIPHPIRALQGLRIKQISCGDCHCLAVTM 171

Query: 402 RTNV 405
              V
Sbjct: 172 ENKV 175


>gi|302810693|ref|XP_002987037.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
 gi|300145202|gb|EFJ11880.1| hypothetical protein SELMODRAFT_125311 [Selaginella moellendorffii]
          Length = 228

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 97/199 (48%), Gaps = 17/199 (8%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           ++ FV   C S H +A+   G  Y++G+   G LGHG       P IV  L    I +  
Sbjct: 34  ELLFVRVACGSSHTLALTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQIA 93

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVW 175
            G +H+  +T +G   ++G  K+GQLG GS+ N ++P PV  L    +T   CGAD+T+ 
Sbjct: 94  CGDNHSCALTVEGQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMA 153

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           + S     + + G   +GQ GHGT +                  P+ + +L  + IV+ +
Sbjct: 154 IDS--DGQLFSWGHGHWGQTGHGTQDNILV--------------PKLVCSLENDNIVQAS 197

Query: 236 CGTNHTVAVDSKGYVYTWG 254
            G  H VA+ S G VY WG
Sbjct: 198 AGARHAVALTSGGGVYAWG 216



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/234 (29%), Positives = 111/234 (47%), Gaps = 24/234 (10%)

Query: 81  TWGRNERGQLGHGDK---IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           +WG  E GQLG  D         P  +    +    +   G SHT+ +T  G+  +FG  
Sbjct: 3   SWGCGEFGQLGLKDAAGVFTSPLPRFLRGSRELLFVRVACGSSHTLALTGSGDVYSFGQG 62

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             G LG G+  +   P  V  L    +   ACG + +  L+ VEG  + + G  +YGQLG
Sbjct: 63  TFGALGHGTTESCSSPVIVDSLWGLGIVQIACGDNHSCALT-VEG-QLFSWGRGKYGQLG 120

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            G+               E   +P  + AL+   + +V CG ++T+A+DS G +++WG G
Sbjct: 121 CGS--------------VENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGHG 166

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            +G+ GH  Q +  VP+ V   + +N++      SAG+ ++     GG +Y WG
Sbjct: 167 HWGQTGHGTQDNILVPKLVCSLENDNIVQA----SAGARHAVALTSGGGVYAWG 216



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/224 (27%), Positives = 105/224 (46%), Gaps = 24/224 (10%)

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +++ G  ++GQLG         KD++        P PR +        V+VACG++HT+A
Sbjct: 1   LVSWGCGEFGQLG--------LKDAA---GVFTSPLPRFLRGSRELLFVRVACGSSHTLA 49

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           +   G VY++G G +G LGH   +    P  VD      ++     I+ G  +S      
Sbjct: 50  LTGSGDVYSFGQGTFGALGHGTTESCSSPVIVDSLWGLGIVQ----IACGDNHSCALTVE 105

Query: 304 GQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGH 356
           GQL+ WG+ K       + ++ + P P+  LS   L  +  G  +   + +D    SWGH
Sbjct: 106 GQLFSWGRGKYGQLGCGSVENHLQPVPVTALSDRLLTQVVCGADYTMAIDSDGQLFSWGH 165

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +G+ G+G   Q +  +PK V  LE  +++  + G  H++ + 
Sbjct: 166 GHWGQTGHGT--QDNILVPKLVCSLENDNIVQASAGARHAVALT 207



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C + + +A+D +G+ ++WG    GQ GHG +     P +V  L    I +A AG  H V 
Sbjct: 146 CGADYTMAIDSDGQLFSWGHGHWGQTGHGTQDNILVPKLVCSLENDNIVQASAGARHAVA 205

Query: 125 VTEDGNSLAFGWNKHGQL 142
           +T  G   A+G N+ GQ+
Sbjct: 206 LTSGGGVYAWGDNEQGQV 223


>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
          Length = 677

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 105/222 (47%), Gaps = 19/222 (8%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           DI+ V   C   H +A+  E   Y+WG+N+ GQLG G +K +   P  +  LS       
Sbjct: 136 DIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG  H+  +T  G    +G NK GQLG     +  +P+ ++ L S+ +    CG D T 
Sbjct: 196 AAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+   G     AG   YGQLGH + +               +  PR +  L G  + ++
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSASH--------------EVNPRKVFELMGNIVTQI 299

Query: 235 ACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           ACG  HT+A V S G +Y++G GG G+LG     ++  P  V
Sbjct: 300 ACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMV 341



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P          ++  G G  HT  V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R +  P  V  L +++  A +CG   T+ L+  +   + + G   +GQ+G  
Sbjct: 64  GQLGHDKSRKK--PEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAAHGQIG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      V +A +    PR I +L+   IV+VACG +H++A+  +  +Y+WG   Y
Sbjct: 118 -----------VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E++ E  PR +          P A I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGSEKRKESAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             N+  D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+L  V
Sbjct: 283 VN--PRKVFELMGNIVTQIACGRQHTLAFV 310



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 93/340 (27%), Positives = 151/340 (44%), Gaps = 35/340 (10%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           ++ P R    +  ++R V  GC + H   V  +G  YT G N+ GQLGH DK  R +P  
Sbjct: 22  VIEPRRCDFFINKNVRDV--GCGNRHTGFVLDDGTVYTCGCNDLGQLGH-DK-SRKKPEQ 77

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
           V  L    I     G +HT+ + + G   ++G   HGQ+G     + I  P  ++ L   
Sbjct: 78  VGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI 137

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           ++   ACG   ++ LS  + ++I + G  QYGQLG G++     K+S+          PR
Sbjct: 138 QIVQVACGHHHSLALS--KESNIYSWGQNQYGQLGLGSEKR---KESA----------PR 182

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I +L+G     +A G  H+ A+   G ++ WG   +G+LG  ++ D   P  +   +  
Sbjct: 183 HIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQ 242

Query: 282 NVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
            ++          A+   G V +    G GQL       N+    + P+ + +L G  + 
Sbjct: 243 KIIYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSASHEVNPRKVFELMGNIVT 297

Query: 335 CMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSS 372
            +  G  H   FV +     S+G    G+LG G    K S
Sbjct: 298 QIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKS 337



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 119/281 (42%), Gaps = 36/281 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  E+   P RC   +   V    CG   T ++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH         D S K       +P  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGH---------DKSRK-------KPEQVGALDAQIIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V++WG   +G++G    +D   VPR +       ++     ++ G  +S   +    +Y
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQ----VACGHHHSLALSKESNIY 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            WG+       L +       P+ +  LSG     + +G  H F    S  I  WG  ++
Sbjct: 160 SWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G+LG      +S   P  +  L    +I + CG  H+  + 
Sbjct: 220 GQLGLNDETDRSD--PALLKSLRSQKIIYICCGEDHTAALT 258



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 6/166 (3%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  ++ L G+    +AAG    H  A+ + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 APRHIKSLSGIPFAHIAAG--GGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +E+ P  V  L+   VT
Sbjct: 238 SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
             ACG   T+      G  I + GL   GQLG G+ +  N K  S+
Sbjct: 298 QIACGRQHTLAFVPSSG-RIYSFGLGGNGQLGIGSTS--NKKSPSM 340



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+ L    I ++   C   H  A+  EG  +T+G    GQLGH        P  V E
Sbjct: 233 PALLKSLRSQKIIYIC--CGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFE 290

Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L    + +   GR HT+  V   G   +FG   +GQLG GS  N+  PS V+
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|405950964|gb|EKC18916.1| RCC1 and BTB domain-containing protein 1 [Crassostrea gigas]
          Length = 531

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 118/246 (47%), Gaps = 18/246 (7%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV-SELSKYKIKKAGAGRSHTVVVTE 127
           H +AV   G  Y+WG N   QLG+G   Q   PT++ + L   KI +   G  H++ +++
Sbjct: 86  HVLAVSKNGEMYSWGHNGYCQLGNGGSGQGLTPTLINTNLQGKKILRVACGSHHSMALSQ 145

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           +G   A+G N  GQ+GSGS  N+  P  V  ++    A +     T  ++ +E   +   
Sbjct: 146 EGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKMALSIACGQTSSMALLENGEVYGW 205

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    GQLG G  N  N            QP P  +  L G  I ++ CG  HT+A+  +
Sbjct: 206 GYNGNGQLGLG--NNVN------------QPNPCRVQQLQGVIISQLVCGYAHTLALSDE 251

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G +++WG   YG+LG   + ++  P +V +   N     E   S  +  S+  +  G+++
Sbjct: 252 GSLFSWGANSYGQLGTGNKANQVSPSKVPM---NGERMVEIAASHYAHISAAMSETGKVF 308

Query: 308 MWGKLK 313
           MWG+ +
Sbjct: 309 MWGQCR 314



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 127/298 (42%), Gaps = 34/298 (11%)

Query: 111 KIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
           KIKK    G+  +  + +T D    A G N    LG G   +  EP  V  L   ++   
Sbjct: 20  KIKKICVFGSSGNEAIYITNDDEVYAIGSNCSSCLGLGDAHSSFEPRKVDVLCKKKIVDI 79

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AA 225
           A G+   V   S  G  + + G   Y QLG+G   +  T              P  I   
Sbjct: 80  AFGSGPHVLAVSKNG-EMYSWGHNGYCQLGNGGSGQGLT--------------PTLINTN 124

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G+ I++VACG++H++A+  +G ++ WG    G++G     ++  PR+V     N +  
Sbjct: 125 LQGKKILRVACGSHHSMALSQEGEIFAWGQNNCGQVGSGSTTNQPTPRKVVAVIGNKM-- 182

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSG 339
               I+ G  +S      G++Y WG   N     G++   P P  +  L G  +  +  G
Sbjct: 183 -ALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQLQGVIISQLVCG 241

Query: 340 NMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG-YGH 395
             H    +D  S  SWG   YG+LG G    + S  P KV  + G  ++ +A   Y H
Sbjct: 242 YAHTLALSDEGSLFSWGANSYGQLGTGNKANQVS--PSKVP-MNGERMVEIAASHYAH 296



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 24/218 (11%)

Query: 42  GNLVSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           G  ++PT +   L G  I  VA  C S H +A+  EG  + WG+N  GQ+G G    +  
Sbjct: 113 GQGLTPTLINTNLQGKKILRVA--CGSHHSMALSQEGEIFAWGQNNCGQVGSGSTTNQPT 170

Query: 101 P-TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           P  +V+ +          G++ ++ + E+G    +G+N +GQLG G+  N+  P  V+ L
Sbjct: 171 PRKVVAVIGNKMALSIACGQTSSMALLENGEVYGWGYNGNGQLGLGNNVNQPNPCRVQQL 230

Query: 160 VSEVTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              + +   CG   T+ LS  EG S+ + G   YGQLG G  N+ N            Q 
Sbjct: 231 QGVIISQLVCGYAHTLALSD-EG-SLFSWGANSYGQLGTG--NKAN------------QV 274

Query: 219 RPRAIAALAGETIVKVACG--TNHTVAVDSKGYVYTWG 254
            P  +  + GE +V++A     + + A+   G V+ WG
Sbjct: 275 SPSKV-PMNGERMVEIAASHYAHISAAMSETGKVFMWG 311


>gi|320163091|gb|EFW39990.1| chromosome condensation regulator RCC1 [Capsaspora owczarzaki ATCC
           30864]
          Length = 1230

 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 158/371 (42%), Gaps = 59/371 (15%)

Query: 47  PTRLRPLVGVDIRFVAAG--CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           PT L     V +  +A+   C   H + + V+G+ Y+ G N++GQLGH  K  R +P  V
Sbjct: 111 PTELEAFSSVSMSTLASAIACGRAHTLFL-VDGQVYSCGSNDQGQLGH--KKHRSKPERV 167

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L  Y I +   G +H++ +T +G   A+G NK  QLG     +  +PS      +  +
Sbjct: 168 DALEPYTITQIACGETHSLALTSNGQVFAWGDNKASQLGLTPSESSRQPS------TRSS 221

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-EAQPRPRAI 223
           A    A      +S++    L+A                        LAY +   RPR +
Sbjct: 222 APKTAA------ASIDDVDELDAA----------------------TLAYMDFMTRPRLV 253

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            AL G  IV++ CG N ++ +  +G V+ WG    G+L  RE K   VP  V        
Sbjct: 254 RALTGHKIVQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTLVKELYGI-- 311

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN-------GDDWMY--PKPLMDLSGWNLR 334
             P   ++AG  ++      GQ+Y WG   NN       GD   +  P  L  L      
Sbjct: 312 --PIRQLAAGGRHTLALTFNGQVYSWG---NNQFGQLGVGDTAPHTIPSRLKTLEHQFCA 366

Query: 335 CMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G  H  V  ++  + S+G    G+LG+G    ++   P+ +  L G     V CG 
Sbjct: 367 HIACGEDHSVVLTETGGVYSFGAGGQGQLGHGTL--QNEINPRMIFELMGKSASQVLCGR 424

Query: 394 GHSLVIVDRTN 404
            H++V   +TN
Sbjct: 425 RHTIVFFPKTN 435



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 116/265 (43%), Gaps = 30/265 (11%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           +  P  +R L G  I  V   C +   + +   G  + WG N  GQL   +      PT+
Sbjct: 247 MTRPRLVRALTGHKI--VQIVCGANFSLVLSERGDVFAWGDNTSGQLCLRELKTVPVPTL 304

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
           V EL    I++  AG  HT+ +T +G   ++G N+ GQLG G       PS ++ L  + 
Sbjct: 305 VKELYGIPIRQLAAGGRHTLALTFNGQVYSWGNNQFGQLGVGDTAPHTIPSRLKTLEHQF 364

Query: 164 TA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-DNEYNTKDSSVKLAYEAQPRPR 221
            A  ACG D +V L+   G     AG    GQLGHGT  NE N               PR
Sbjct: 365 CAHIACGEDHSVVLTETGGVYSFGAG--GQGQLGHGTLQNEIN---------------PR 407

Query: 222 AIAALAGETIVKVACGTNHTVAVDSK-GYVYTWGFGGYGRLGH----REQKDEWVPRRVD 276
            I  L G++  +V CG  HT+    K   +Y +G GG G+LG       Q+    P  V 
Sbjct: 408 MIFELMGKSASQVLCGRRHTIVFFPKTNKIYAFGLGGNGQLGTGVGVEPQQHVLTPMLVR 467

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTA 301
           V     +L     I+ G+  S C A
Sbjct: 468 VLDATPIL----RIATGASASHCFA 488



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 54/132 (40%), Gaps = 13/132 (9%)

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP--LMDLSGWNLRCMD 337
           R+ V+P      AGSV +      GQL   G    N      P+P  L   S  ++  + 
Sbjct: 70  RDTVVPAAHAQLAGSVWAWGNPTDGQL---GLRLTNDHTLAVPEPTELEAFSSVSMSTLA 126

Query: 338 S----GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
           S    G  H     D    S G    G+LG+    +K  + P++VD LE   +  +ACG 
Sbjct: 127 SAIACGRAHTLFLVDGQVYSCGSNDQGQLGH----KKHRSKPERVDALEPYTITQIACGE 182

Query: 394 GHSLVIVDRTNV 405
            HSL +     V
Sbjct: 183 THSLALTSNGQV 194


>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Anolis carolinensis]
          Length = 1060

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 34/355 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEVVLEPRRCNFFLNKTVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R RP  V  L    I     G +HT+ + + G   A+G+   GQLG  G+      P  
Sbjct: 71  SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  +G+ + + G  ++GQLG G D              
Sbjct: 131 IKSLSDVQIVQVACGYYHSLALS--KGSEVFSWGQNKHGQLGLGYD-------------L 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G    ++A G  H+ A+   G V+ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGD-DWMYPKPLMDL 328
           +   +   ++     IS G  +++     G ++      +G+L +N     + P+ + +L
Sbjct: 236 LKSLRSQKIV----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
            G  +  +  G  H   FV +     S+G    G+LG G    + S  P K + L
Sbjct: 292 MGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFL 346



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 25/242 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           D++ V   C   H +A+      ++WG+N+ GQLG G D  ++  P ++  L      + 
Sbjct: 136 DVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+  +T  G    +G NK GQLG     +   P+ ++ L S+ +   +CG D T 
Sbjct: 196 AAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTGHEIN---------------PRKVFELMGNIVTQ 298

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
           +ACG  HT A V S G +Y++G GG G+LG     +   P  V    + N LP    I  
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPV----KGNFLPFNGQIPL 354

Query: 293 GS 294
            S
Sbjct: 355 NS 356



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 34/333 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P   +      ++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R    P  V  L ++ + A +CG   T+ L+  +   +   G    GQLG  
Sbjct: 64  GQLGHEKSRKR--PEQVGALDAQNIVAVSCGEAHTLTLN--DKGQVYAWGFAADGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY                PR I +L+   IV+VACG  H++A+     V++WG   +
Sbjct: 120 GTEEYTRV-------------PRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGYDLKKQTSPQLI----KSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+   G +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
            +  P+KV  L G  V  +ACG  H+   V  T
Sbjct: 283 IN--PRKVFELMGNIVTQIACGRQHTSAFVPST 313



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  E+   P RC   L   V    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +++ RP  + AL  + IV V+CG  HT+ ++ KG
Sbjct: 60  CNDLGQLGHE----------------KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKG 103

Query: 249 YVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WGF   G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQ----VACGYYHSLALSKGSEVF 159

Query: 308 MWGKLKNNGDDWMY-------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            WG+ K+      Y       P+ +  L G     + +G  H F    S +   WG  ++
Sbjct: 160 SWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG     +    +P  +  L    ++ ++CG  H+
Sbjct: 220 GQLGLN--DENDRYVPNLLKSLRSQKIVYISCGEDHT 254


>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
 gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
          Length = 371

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 18/205 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L  P  +R L G+ I+ ++  C  CHC+AV +E +  +WGRN+ G+
Sbjct: 183 WGDFGRLGHGDPSDLFIPHPIRALQGLRIKQIS--CGDCHCLAVTMENKVLSWGRNQNGE 240

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +      +IK   AG  H+V +TEDG+   +GW ++G LG G   +
Sbjct: 241 LGLGTTKDSHVPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTND 300

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            + P  V     ++   +CG   T+ +SS  G  +   G  +YGQLGHG           
Sbjct: 301 RLIPEKVNIDGDKIVMVSCGWRHTISISSSGG--LYTHGWSKYGQLGHGD---------- 348

Query: 210 VKLAYEAQPRPRAIAALAGETIVKV 234
               +E    PR + AL+ + I +V
Sbjct: 349 ----FEDCLVPRKVQALSDKLISQV 369



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 116/234 (49%), Gaps = 21/234 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR-CYTWGRNERGQLGHGDKIQRDRPTIVS 105
           PT+L    G DI  V+  C + + VA    G+  Y+WG  + G+LGHGD      P  + 
Sbjct: 147 PTKLSAFDGQDI--VSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFIPHPIR 204

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVT 164
            L   +IK+   G  H + VT +   L++G N++G+LG G+ ++   P  +       + 
Sbjct: 205 ALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSHVPQKILAFEGIRIK 264

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A GA+ +V ++  E   +   G  +YG LG G  N+        +L  E         
Sbjct: 265 MVAAGAEHSVAIT--EDGDLYGWGWGRYGNLGLGDTND--------RLIPEK-------V 307

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            + G+ IV V+CG  HT+++ S G +YT G+  YG+LGH + +D  VPR+V   
Sbjct: 308 NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 361



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/257 (32%), Positives = 120/257 (46%), Gaps = 29/257 (11%)

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKH 139
           +WGR E GQLGHGD   R  PT +S      I     G  +TV  ++ G  + ++GW   
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDF 186

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G+LG G   +   P P+R L    +   +CG D      ++E   +L+ G  Q G+LG G
Sbjct: 187 GRLGHGDPSDLFIPHPIRALQGLRIKQISCG-DCHCLAVTMEN-KVLSWGRNQNGELGLG 244

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           T     TKDS V         P+ I A  G  I  VA G  H+VA+   G +Y WG+G Y
Sbjct: 245 T-----TKDSHV---------PQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRY 290

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--WGKLKNNG 316
           G LG  +  D  +P +V++     V+     +S G  ++   +  G LY   W K    G
Sbjct: 291 GNLGLGDTNDRLIPEKVNIDGDKIVM-----VSCGWRHTISISSSGGLYTHGWSKYGQLG 345

Query: 317 ----DDWMYPKPLMDLS 329
               +D + P+ +  LS
Sbjct: 346 HGDFEDCLVPRKVQALS 362



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 119/260 (45%), Gaps = 31/260 (11%)

Query: 148 RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           RN+ E  PV+  V         + F    + V G  + + G  + GQLGHG     +T D
Sbjct: 91  RNKEEEEPVK--VHSGMLNLFSSLFNSIQNQVSGNVVCSWGRGEDGQLGHG-----DTDD 143

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY-VYTWGFGGYGRLGHREQ 266
             +         P  ++A  G+ IV V CG ++TVA    G  VY+WG+G +GRLGH + 
Sbjct: 144 RLL---------PTKLSAFDGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDP 194

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWM 320
            D ++P  +   Q   +      IS G  +        ++  WG+ +N         D  
Sbjct: 195 SDLFIPHPIRALQGLRI----KQISCGDCHCLAVTMENKVLSWGRNQNGELGLGTTKDSH 250

Query: 321 YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
            P+ ++   G  ++ + +G  H   +  D     WG  +YG LG G    +   +P+KV+
Sbjct: 251 VPQKILAFEGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGLGDTNDR--LIPEKVN 308

Query: 380 ILEGMHVISVACGYGHSLVI 399
           I +G  ++ V+CG+ H++ I
Sbjct: 309 I-DGDKIVMVSCGWRHTISI 327



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 121/257 (47%), Gaps = 30/257 (11%)

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           ++G  + GQLG G   + + P+ +      ++ +  CGAD+TV   S  G  + + G   
Sbjct: 127 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIVSVTCGADYTV-ARSKSGKDVYSWGWGD 185

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +G+LGHG  ++                 P  I AL G  I +++CG  H +AV  +  V 
Sbjct: 186 FGRLGHGDPSDLFI--------------PHPIRALQGLRIKQISCGDCHCLAVTMENKVL 231

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
           +WG    G LG    KD  VP+++  F+   +     +++AG+ +S      G LY WG 
Sbjct: 232 SWGRNQNGELGLGTTKDSHVPQKILAFEGIRI----KMVAAGAEHSVAITEDGDLYGWGW 287

Query: 311 -KLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
            +  N G    +D + P+ + ++ G  +  +  G  H   + +     + G ++YG+LG+
Sbjct: 288 GRYGNLGLGDTNDRLIPEKV-NIDGDKIVMVSCGWRHTISISSSGGLYTHGWSKYGQLGH 346

Query: 365 GPYGQKSSAMPKKVDIL 381
           G +  +   +P+KV  L
Sbjct: 347 GDF--EDCLVPRKVQAL 361



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 77/163 (47%), Gaps = 12/163 (7%)

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           S   V +WG G  G+LGH +  D  +P ++  F   +++   +V        + +  G  
Sbjct: 121 SGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQDIV---SVTCGADYTVARSKSGKD 177

Query: 306 LYMWG----KLKNNGD--DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           +Y WG        +GD  D   P P+  L G  ++ +  G+ H   V  ++  +SWG  Q
Sbjct: 178 VYSWGWGDFGRLGHGDPSDLFIPHPIRALQGLRIKQISCGDCHCLAVTMENKVLSWGRNQ 237

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            GELG G    K S +P+K+   EG+ +  VA G  HS+ I +
Sbjct: 238 NGELGLGT--TKDSHVPQKILAFEGIRIKMVAAGAEHSVAITE 278


>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Regulator of chromosome condensation and BTB
           domain-containing protein 1
 gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Mus musculus]
          Length = 531

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 31/274 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL    V
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL G  + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P ++       +
Sbjct: 228 AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI-------M 280

Query: 284 LPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
           +  E VI   + +S+ T+     GG +YMWG+ +
Sbjct: 281 VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V L++ +G  +   G   Y QLG+GT N             +  
Sbjct: 71  LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+ + G ++ WG+   G++G     ++  PR+V  
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSTHT 297



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L G+ +  +  G    H +A+  EG  Y WG N  GQLG G K     
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           PT +    +  I+ A    +HT      G
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQG 304


>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
          Length = 614

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 129/283 (45%), Gaps = 28/283 (9%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H  A+   G  YT G N RGQLG G        T+V EL+  ++   G    HT +V ++
Sbjct: 132 HLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMDN 191

Query: 129 GNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILN 186
           G+  A G N +GQLG G  RN E+ P PV       V A ACG  +T+       AS+ +
Sbjct: 192 GDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVLAVACGQHYTI-------ASLRD 244

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G+  +G+  HG     +T +   +    A P  R +       + +++CG +HT  V  
Sbjct: 245 GGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLV-------VPQLSCGYHHTAVVTE 297

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G VYT+G   YG+LG   +     P RV+   R  +      ++ G  ++   +  G++
Sbjct: 298 DGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRI----TQVACGCYHTLVLSDDGKV 353

Query: 307 YMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNMH 342
           + +G+  N+G        D + P+ +  L    +  + +G  H
Sbjct: 354 FPFGR-NNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYH 395



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 146/349 (41%), Gaps = 47/349 (13%)

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKKAGAGRSHTVVVTEDG 129
           ++VEG  Y++G+N  G+L  GD   R  P  V   +     ++     G   T ++ EDG
Sbjct: 28  LEVEG-VYSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDG 86

Query: 130 NSLAFGWNKHGQLGSGSIRN--EIEPSPVRCLVSEVTATACGADFTVWLSSVEG-ASILN 186
           +    G+N  GQ   G+      +  SP   L S  T      + +  L+++    ++  
Sbjct: 87  DVYTCGYNDSGQCAIGTTERVPTLRFSP--GLSSNRTVRIFSGNGSEHLAALHANGNLYT 144

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G    GQLG G+    +T      L  E          LAG+ +  V C   HT  V  
Sbjct: 145 VGFNMRGQLGLGS----STTVMEATLVEE----------LAGKRVADVGCSYFHTAIVMD 190

Query: 247 KGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
            G +Y  G   YG+LG  + ++ E VPR V+ F R  VL     ++ G   +  +   G 
Sbjct: 191 NGDLYACGCNDYGQLGLGDHRNGELVPRPVEYFFRRPVL----AVACGQHYTIASLRDGG 246

Query: 306 LYMWGK-------LKNNGDDWMYPK----PLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
           +  +GK       L +  +    P     PL  L    L C      HH   V  D +  
Sbjct: 247 VVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSC----GYHHTAVVTEDGAVY 302

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           ++G   YG+LG G   +   A P +V+ L  M +  VACG  H+LV+ D
Sbjct: 303 TFGRNDYGQLGLG--HKMHMARPARVESLARMRITQVACGCYHTLVLSD 349



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 1/109 (0%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H   V  +G  YT+GRN+ GQLG G K+   RP  V  L++ +I +   G  HT+V+++D
Sbjct: 291 HTAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRITQVACGCYHTLVLSDD 350

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G    FG N HGQLG  +  + + P  +  L ++ VT  A G   +V L
Sbjct: 351 GKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKTVTKVAAGFYHSVCL 399



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++  P R+  L  + I  VA GC   H + +  +G+ + +GRN  GQLG    +    P 
Sbjct: 319 HMARPARVESLARMRITQVACGCY--HTLVLSDDGKVFPFGRNNHGQLGLETSVDCLSPQ 376

Query: 103 IVSELSKYKIKKAGAGRSHTVVV 125
           ++S L    + K  AG  H+V +
Sbjct: 377 LISTLRNKTVTKVAAGFYHSVCL 399


>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
           (POZ) domain containing protein 1 [Oryctolagus
           cuniculus]
          Length = 531

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++V+  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYAWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  V V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT+      FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++ + + G VY WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMVLAADGEVYAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYAWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHVMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  V    +  ++ A    +HT      G
Sbjct: 276 PAHVMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
          Length = 555

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 167/411 (40%), Gaps = 66/411 (16%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  + +L  P  L P +     G ++R++   C   H  AV  +G  YTWG N+ GQL
Sbjct: 110 RKGK-ECHLRIPKSLPPKLFKWQDGKNLRWIDVACGRGHTAAVASDGSLYTWGANDFGQL 168

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED-------GNSLAFGWNKHGQLG 143
           G G +     P  V  L    +K    G   T  V E          S  + W ++   G
Sbjct: 169 GDGTEESAKEPQKVKALETEFVKSVSCGAHCTAAVAEPRENNGTISRSRLWVWGQN--QG 226

Query: 144 SGSIR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           S   R     + P+ V      +   +CGA   + LS  E   +   G  +YGQLG G  
Sbjct: 227 SDYPRLFWGALAPNTV------IRQVSCGAVHVMALS--EDGLLQAWGYNEYGQLGRGCT 278

Query: 201 NEYNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           +E   + + V  AY       P  +       IV+V+CG  HT A+   G VYTWG G  
Sbjct: 279 SE-GLQGARVLNAYARFLDEAPELV------KIVRVSCGEYHTAAISENGEVYTWGLGSM 331

Query: 259 GRLGH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----- 310
           G+LGH   +    E +PRRV    R  +      +S G V+S      G LY WG     
Sbjct: 332 GQLGHCSLQSGDKELIPRRVVALDRTVIRD----VSCGGVHSCAVTEDGALYAWGGGHVG 387

Query: 311 -----------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQ 358
                          NG D +     + +    ++ +  G+ H  V   DS    WG+  
Sbjct: 388 QLGLGPQSGFFSCALNGSDMLLRNIPVLIIPSGVQLVTCGHSHTLVSMKDSRIYGWGYNS 447

Query: 359 YGELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           YG+       +KS+    P  VD   G  V  +A G GHS V+ D  ++ E
Sbjct: 448 YGQAA----NEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAVLTDACSLKE 493


>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
 gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
 gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_a [Mus musculus]
          Length = 531

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 31/274 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL    V
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL G  + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P ++       +
Sbjct: 228 AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI-------M 280

Query: 284 LPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
           +  E VI   + +S+ T+     GG +YMWG+ +
Sbjct: 281 VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 77/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V L++ +G  +   G   Y QLG+GT N             +  
Sbjct: 71  LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+ + G ++ WG+   G++G     ++  PR+V  
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSTHT 297



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L G+ +  +  G    H +A+  EG  Y WG N  GQLG G K     
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           PT +    +  I+ A    +HT      G
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQG 304


>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
          Length = 580

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 156/356 (43%), Gaps = 60/356 (16%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA---------------GAGRSHTVVVT 126
           WG  E G+LGHGD + +  P  +    ++ +  +                 G  HTV VT
Sbjct: 29  WG--EFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT 86

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASIL 185
           EDG  +++GW   GQLGSG+  ++  P+ V+ L +  V   ACG   T  ++ V    ++
Sbjct: 87  EDGEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDV--GLVM 144

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
             G    GQLG G               + +   PR ++ L  E I ++ACG  HT+A+ 
Sbjct: 145 CWGKGNSGQLGQGD--------------WTSSLLPRTVSTLYNEKIRQIACGMAHTLALS 190

Query: 246 SKGYVYTWGFGGYGRLG---HREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
             G +Y+WG G  G+LG   H+E+  D   P++V V +          I+ GS +     
Sbjct: 191 VNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKF----EFIACGSRHCMAIT 246

Query: 302 GGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLR-CMDSGNMHH--FVGADSSCIS 353
              +L+ W     G+L     +  +   ++  S  NLR C  +   HH   +  +    +
Sbjct: 247 DDCRLFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHHTAVLSDNGEIFT 306

Query: 354 WGHAQYGELGYGPYG-----QKSSAMPK-----KVDILEGMHVISVACGYGHSLVI 399
            G   YG+LG+G        +K+ A+        +  L    +I  ACG  H+LVI
Sbjct: 307 CGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLVI 362



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 168/405 (41%), Gaps = 55/405 (13%)

Query: 30  WDAVGRRKGALDGNLVSPTRLR--PLVGVDIRFVA-----------AGCVSCHCVAVDVE 76
           W   GR       + + P RLR      V + F A             C   H VAV  +
Sbjct: 29  WGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTED 88

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           G   +WG    GQLG G+   +  P +V  LS +++     G  HT VVT+ G  + +G 
Sbjct: 89  GEVVSWGWGNEGQLGSGNAFDQTVPAVVKALSNHRVCGVACGYYHTAVVTDVGLVMCWGK 148

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
              GQLG G   + + P  V  L +E +   ACG   T+ LS V G  I + G    GQL
Sbjct: 149 GNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALS-VNG-EIYSWGAGADGQL 206

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G   E  T D +          P+ +     E    +ACG+ H +A+     +++WG 
Sbjct: 207 GVGKHQE-ETADVAT---------PQKVRVDEEEKFEFIACGSRHCMAITDDCRLFSWGL 256

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WG 310
           G  GRLG  + +  + P    V +R+        ++AG  +++  +  G+++      +G
Sbjct: 257 GADGRLGLGDSESRFSP---TVVRRSIENLRICYVAAGGHHTAVLSDNGEIFTCGRGSYG 313

Query: 311 KLKNNGDD----------------WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
           +L +   D                 ++   L D       C D+  +   +       +W
Sbjct: 314 QLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTL--VISTAGEVFAW 371

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G A+ G+LG G  G + +  P ++  L G+ V  V+CG  HS  +
Sbjct: 372 GAAEDGQLGTG--GTEGANSPVELTSLRGL-VGDVSCGLVHSAAV 413



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 113/298 (37%), Gaps = 48/298 (16%)

Query: 135 GWNKHGQLGSGSIRNEIEPSPVR------------CLVSE----VTATACGADFTVWLSS 178
           GW + G+LG G   +++EP  +R             L  E        ACG   TV ++ 
Sbjct: 28  GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVT- 86

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
            E   +++ G    GQLG G     N  D +V         P  + AL+   +  VACG 
Sbjct: 87  -EDGEVVSWGWGNEGQLGSG-----NAFDQTV---------PAVVKALSNHRVCGVACGY 131

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            HT  V   G V  WG G  G+LG  +     +PR V       +      I+ G  ++ 
Sbjct: 132 YHTAVVTDVGLVMCWGKGNSGQLGQGDWTSSLLPRTVSTLYNEKIRQ----IACGMAHTL 187

Query: 299 CTAGGGQLYMW----------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
             +  G++Y W          GK +    D   P+ +          +  G+ H   +  
Sbjct: 188 ALSVNGEIYSWGAGADGQLGVGKHQEETADVATPQKVRVDEEEKFEFIACGSRHCMAITD 247

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           D    SWG    G LG G    + S    +  I E + +  VA G  H+ V+ D   +
Sbjct: 248 DCRLFSWGLGADGRLGLGDSESRFSPTVVRRSI-ENLRICYVAAGGHHTAVLSDNGEI 304


>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1, isoform CRA_b [Mus musculus]
          Length = 563

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 126/274 (45%), Gaps = 31/274 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 97  PKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 155

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL    V
Sbjct: 156 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKRV 215

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 216 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 259

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL G  + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P ++       +
Sbjct: 260 AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI-------M 312

Query: 284 LPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
           +  E VI   + +S+ T+     GG +YMWG+ +
Sbjct: 313 VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 346



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 38/300 (12%)

Query: 112 IKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
           I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  L   ++ + +
Sbjct: 53  IRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLS 112

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
            G+   V L++ +G  +   G   Y QLG+GT N             +     +    L 
Sbjct: 113 YGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGIAPVQVCTNLL 158

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            + +++VACG++H++A+ + G ++ WG+   G++G     ++  PR+V      N L  +
Sbjct: 159 IKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-----TNCLHTK 213

Query: 288 AV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
            V  I+ G  +S      G++Y WG        L NNG+  + P  +  L G  +  +  
Sbjct: 214 RVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHGMCVNQIVC 272

Query: 339 GNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
           G  H     D   + +WG   YG+LG    G K++ +     ++E   VI + AC   H+
Sbjct: 273 GYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVIEIAACHSTHT 329



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L G+ +  +  G    H +A+  EG  Y WG N  GQLG G K     
Sbjct: 250 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 307

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           PT +    +  I+ A    +HT      G
Sbjct: 308 PTQIMVEKERVIEIAACHSTHTSAAKTQG 336


>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 396

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 38/333 (11%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   +++  ++V  L  + ++    G  +++ + +DG    +GWN+ G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVW--LSSVEGASILNAGLPQYGQLGH 197
           LG     + E  PS V+ L S ++   A G     W  L+  +       G  +YGQ G 
Sbjct: 70  LGHPPETKTESTPSLVKSLASVKIVQAAIGG----WHCLAVDDQGRAYAWGGNEYGQCG- 124

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
               E  +KD + +        P+  A     T+ +VA G  H+V +  +GYV+TWG   
Sbjct: 125 ----EEPSKDETGRPVRRDIVIPKRCAPQL--TVRQVAAGGTHSVVLTREGYVWTWG--- 175

Query: 258 YGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
                       W P   +++ +  R   L    +I+ G+ ++      G L+ WG  + 
Sbjct: 176 ----------QPWPPGDIKQISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEY 225

Query: 314 ---NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
                GD     +P P+  L    L  + +G  H   +  +     WG  ++G LG+G  
Sbjct: 226 GQLGTGDTQPRSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDN 285

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            + S  +P+KV++L G  +I V+CG  HS+ + 
Sbjct: 286 DKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALT 318



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 161/378 (42%), Gaps = 60/378 (15%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKK 114
            ++R V  G  S + +A+  +G+ +TWG N+RG LGH  + + +  P++V  L+  KI +
Sbjct: 38  FNVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLASVKIVQ 95

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
           A  G  H + V + G + A+G N++GQ G    ++E    PVR  +  V    C    TV
Sbjct: 96  AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAPQLTV 152

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAAL 226
                     + AG         GT +   T++  V    +  P         P  +  L
Sbjct: 153 --------RQVAAG---------GTHSVVLTREGYVWTWGQPWPPGDIKQISIPVRVQGL 195

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             E +  +A G  H +A+   G ++ WG   YG+LG  + +    P  V       ++  
Sbjct: 196 --ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDLTLVD- 252

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDS 338
              I+AG  +S+     G++Y WG+ +        N+    M P+ +  L+G ++  +  
Sbjct: 253 ---IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSC 309

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--LEGMH---------- 385
           G  H   +  D    S+G   +G LGYG        +   +DI  LEG            
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFNHTDEEDDGK 369

Query: 386 --VISVACGYGHSLVIVD 401
                VACG  H+L IV+
Sbjct: 370 WIAKHVACGGRHTLAIVE 387



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 40/277 (14%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQR 98
           +P+ ++ L  V I  V A     HC+AVD +GR Y WG NE GQ G        G  ++R
Sbjct: 81  TPSLVKSLASVKI--VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           D         +  +++  AG +H+VV+T +G    + W        G I+    P  V+ 
Sbjct: 139 DIVIPKRCAPQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISIPVRVQG 194

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           L   V   A GA   + L   E  ++   G  +YGQLG G                + QP
Sbjct: 195 L-ENVRLIAVGAFHNLALK--EDGTLWAWGNNEYGQLGTG----------------DTQP 235

Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
           R  P  +  L   T+V +A G  H+ A+ ++G VY WG G +GRLG    ++  + +P++
Sbjct: 236 RSFPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           V++    +++     +S G  +S      G+++ +G+
Sbjct: 296 VNLLAGEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 27/223 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++V P R  P + V  R VAAG    H V +  EG  +TWG+        GD  Q   P 
Sbjct: 139 DIVIPKRCAPQLTV--RQVAAG--GTHSVVLTREGYVWTWGQ----PWPPGDIKQISIPV 190

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
            V  L   ++   GA   H + + EDG   A+G N++GQLG+G  +    P PV+ L  +
Sbjct: 191 RVQGLENVRLIAVGA--FHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDDL 248

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           + V   A G   T   +  E   +   G  ++G+LG G DN     D S K+       P
Sbjct: 249 TLVDIAAGGWHSTALTNEGE---VYGWGRGEHGRLGFG-DN-----DKSSKML------P 293

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
           + +  LAGE I++V+CG  H+VA+   G ++++G G +GRLG+
Sbjct: 294 QKVNLLAGEDIIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGY 336



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 111/269 (41%), Gaps = 48/269 (17%)

Query: 182 ASILNAGLPQYGQLGHGTDNE------------YNTKD----SSVKLAY----------- 214
            S++  G  + GQLG GTD E            +N +     S   LA            
Sbjct: 5   TSVIAWGSGEDGQLGLGTDEEKELASVVEALEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64

Query: 215 ------------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                       + +  P  + +LA   IV+ A G  H +AVD +G  Y WG   YG+ G
Sbjct: 65  NQRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 263 HREQKDEW-VPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
               KDE   P R D+       P   V  ++AG  +S      G ++ WG+    GD  
Sbjct: 125 EEPSKDETGRPVRRDIVIPKRCAPQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPPGDIK 184

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
               P+      N+R +  G  H+  +  D +  +WG+ +YG+LG G    +S  +P  V
Sbjct: 185 QISIPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIP--V 242

Query: 379 DILEGMHVISVACGYGHSLVIVDRTNVGE 407
             L+ + ++ +A G  HS  +   TN GE
Sbjct: 243 QGLDDLTLVDIAAGGWHSTAL---TNEGE 268



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 17/206 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L   ++R +A G    H +A+  +G  + WG NE GQLG GD   R  P  V  
Sbjct: 189 PVRVQGLE--NVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGTGDTQPRSFPIPVQG 244

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
           L    +    AG  H+  +T +G    +G  +HG+LG G     +++ P  V  L  E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +CG   +V L+      I + G   +G+LG+G      T    ++L  +  P     
Sbjct: 305 IQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIDIPPLEGRF 359

Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
                   G+ I K VACG  HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385


>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Anolis carolinensis]
          Length = 1052

 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 159/355 (44%), Gaps = 34/355 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEVVLEPRRCNFFLNKTVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R RP  V  L    I     G +HT+ + + G   A+G+   GQLG  G+      P  
Sbjct: 71  SRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKGQVYAWGFAADGQLGLPGTEEYTRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  +G+ + + G  ++GQLG G D              
Sbjct: 131 IKSLSDVQIVQVACGYYHSLALS--KGSEVFSWGQNKHGQLGLGYD-------------L 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G    ++A G  H+ A+   G V+ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGD-DWMYPKPLMDL 328
           +   +   ++     IS G  +++     G ++      +G+L +N     + P+ + +L
Sbjct: 236 LKSLRSQKIV----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
            G  +  +  G  H   FV +     S+G    G+LG G    + S  P K + L
Sbjct: 292 MGNIVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPVKGNFL 346



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 111/242 (45%), Gaps = 25/242 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           D++ V   C   H +A+      ++WG+N+ GQLG G D  ++  P ++  L      + 
Sbjct: 136 DVQIVQVACGYYHSLALSKGSEVFSWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+  +T  G    +G NK GQLG     +   P+ ++ L S+ +   +CG D T 
Sbjct: 196 AAGGAHSFALTLSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYISCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTGHEIN---------------PRKVFELMGNIVTQ 298

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
           +ACG  HT A V S G +Y++G GG G+LG     +   P  V    + N LP    I  
Sbjct: 299 IACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSPFPV----KGNFLPFNGQIPL 354

Query: 293 GS 294
            S
Sbjct: 355 NS 356



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 143/333 (42%), Gaps = 34/333 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P   +      ++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R    P  V  L ++ + A +CG   T+ L+  +   +   G    GQLG  
Sbjct: 64  GQLGHEKSRKR--PEQVGALDAQNIVAVSCGEAHTLTLN--DKGQVYAWGFAADGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY                PR I +L+   IV+VACG  H++A+     V++WG   +
Sbjct: 120 GTEEYTRV-------------PRNIKSLSDVQIVQVACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGYDLKKQTSPQLI----KSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+   G +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTGHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
            +  P+KV  L G  V  +ACG  H+   V  T
Sbjct: 283 IN--PRKVFELMGNIVTQIACGRQHTSAFVPST 313



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  E+   P RC   L   V    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +++ RP  + AL  + IV V+CG  HT+ ++ KG
Sbjct: 60  CNDLGQLGHE----------------KSRKRPEQVGALDAQNIVAVSCGEAHTLTLNDKG 103

Query: 249 YVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WGF   G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGFAADGQLGLPGTEEYTRVPRNIKSLSDVQIVQ----VACGYYHSLALSKGSEVF 159

Query: 308 MWGKLKNNGDDWMY-------PKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            WG+ K+      Y       P+ +  L G     + +G  H F    S +   WG  ++
Sbjct: 160 SWGQNKHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSGAVFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG     +    +P  +  L    ++ ++CG  H+
Sbjct: 220 GQLGLN--DENDRYVPNLLKSLRSQKIVYISCGEDHT 254


>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
 gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Danio rerio]
 gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
          Length = 531

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 131/276 (47%), Gaps = 31/276 (11%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P +L  L G  +  ++ G    H + V  +G  Y WG N   QLG+G   Q   P +V
Sbjct: 63  IAPKKLDCLSGKKLISLSYGS-GPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILV 121

Query: 105 S-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSE 162
           S  L   ++ +   G  H++ +T +G   A+G+N  GQ+GSGS  N+  P  V  CL ++
Sbjct: 122 STNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNK 181

Query: 163 VTAT-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           V    ACG   T  ++  +   +   G    GQLG G +                Q  P 
Sbjct: 182 VIVNIACGQ--TSSMAVTDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPC 225

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            + AL G  ++++A G  H++A+  +G +Y WG   YG+LG   + ++  P +V      
Sbjct: 226 RLIALQGFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQV------ 279

Query: 282 NVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
            +   E ++   + +S+ T+      GQ+YMWG+ +
Sbjct: 280 -MTEKERIVEIAACHSTHTSAAKTQSGQVYMWGQCR 314



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 35/297 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I++A   GA  +  + +T D      G N    LG+G  ++ I P  + C
Sbjct: 11  TLLSAQELSSIRQACIFGASANEAIYITHDDEVYVLGLNCSNCLGTGDSQSTIAPKKLDC 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V L + +G  +   G   Y QLG+GT N+               
Sbjct: 71  LSGKKLISLSYGSGPHVLLVTEDG-ELYAWGHNGYSQLGNGTTNQ--------------G 115

Query: 218 PRPRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
             P  ++  L G+ + +V+CG++H++A+  +G V+ WG+   G++G     ++  PR+V 
Sbjct: 116 VSPILVSTNLQGKRVTEVSCGSHHSLALTHEGEVFAWGYNNCGQVGSGSTANQPTPRKVS 175

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLS 329
              +N V+     I+ G  +S      G++Y WG        L NNG+  + P  L+ L 
Sbjct: 176 NCLQNKVI---VNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLIALQ 231

Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS---AMPKKVDILE 382
           G+ +  + SG  H     D   + +WG   YG+LG G    + S    M +K  I+E
Sbjct: 232 GFCVLQIASGYAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEKERIVE 288



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 322 PKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           PK L  LSG  L  +  G+  H   V  D    +WGH  Y +LG G   Q  S +    +
Sbjct: 65  PKKLDCLSGKKLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVSTN 124

Query: 380 ILEGMHVISVACGYGHSLVIVDRTNV 405
            L+G  V  V+CG  HSL +     V
Sbjct: 125 -LQGKRVTEVSCGSHHSLALTHEGEV 149


>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
          Length = 534

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 72  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 130

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H+V +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 131 NLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 190

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G  N  N            Q  P  +
Sbjct: 191 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLG--NNVN------------QLTPVRV 234

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 235 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 293

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 294 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 321



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 136/309 (44%), Gaps = 36/309 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 18  TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEA 77

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 78  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 123

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H+VA+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 124 APIQVCTNLLIKQVVEVACGSHHSVALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 181

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLS 329
               N L  + V  I+ G  +S      G++Y WG   N      N  + + P  +  L 
Sbjct: 182 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNVNQLTPVRVAALH 238

Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+ 
Sbjct: 239 SVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVVE 295

Query: 389 V-ACGYGHS 396
           + AC   H+
Sbjct: 296 IAACHSAHT 304



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 2/87 (2%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     P 
Sbjct: 227 NQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPA 284

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDG 129
            +    +  ++ A    +HT      G
Sbjct: 285 HIMVEKERVVEIAACHSAHTSAAKTQG 311


>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
          Length = 531

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            + ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VSIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V+S   G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 72/189 (38%), Gaps = 54/189 (28%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ + AL G+ I  ++ G+  H +     G VY WG  GY +LG+        P +V   
Sbjct: 65  PKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQV--- 121

Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
              N+L  + V ++ GS +S   A                                    
Sbjct: 122 -CTNLLIKQVVEVACGSHHSMALA------------------------------------ 144

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
                    AD    +WG+   G++G G    + +  P+KV + L    V+S+ACG   S
Sbjct: 145 ---------ADGEVFAWGYNNCGQVGSGSTANQPT--PRKVTNCLHIKRVVSIACGQTSS 193

Query: 397 LVIVDRTNV 405
           + ++D   V
Sbjct: 194 MAVLDNGEV 202


>gi|15237253|ref|NP_197108.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|9755650|emb|CAC01803.1| UVB-resistance protein-like [Arabidopsis thaliana]
 gi|114213505|gb|ABI54335.1| At5g16040 [Arabidopsis thaliana]
 gi|332004857|gb|AED92240.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 396

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 145/330 (43%), Gaps = 32/330 (9%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   +++  ++V  L  + ++    G  +++ + +DG    +GWN+ G 
Sbjct: 10  WGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG     + E  PS V+ L +     A    +       +G +    G  +YGQ G    
Sbjct: 70  LGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCG---- 124

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
            E  +KD + +        P+  A     T+ +VA G  H+V +  +GYV+TWG      
Sbjct: 125 -EEPSKDETGRPVRRDIVIPKRCAQQL--TVRQVAAGGTHSVVLTREGYVWTWG------ 175

Query: 261 LGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
                    W P   +++ V  R   L    +I+ G+ ++      G L+ WG  +    
Sbjct: 176 -------QPWPPGDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQL 228

Query: 314 NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             GD     YP P+  L    L  + +G  H   +  +     WG  ++G LG+G   + 
Sbjct: 229 GTGDTQPRSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKS 288

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           S  +P+KV++L G  +I V+CG  HS+ + 
Sbjct: 289 SKMLPQKVNLLAGEDIIQVSCGGTHSVALT 318



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 129/277 (46%), Gaps = 40/277 (14%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQR 98
           +P+ ++ L   +++ V A     HC+AVD +GR Y WG NE GQ G        G  ++R
Sbjct: 81  TPSLVKSLA--NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRR 138

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           D         +  +++  AG +H+VV+T +G    + W        G I+    P  V+ 
Sbjct: 139 DIVIPKRCAQQLTVRQVAAGGTHSVVLTREG----YVWTWGQPWPPGDIKQISVPVRVQG 194

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           L   V   A GA   + L   E  ++   G  +YGQLG G                + QP
Sbjct: 195 L-ENVRLIAVGAFHNLALK--EDGTLWAWGNNEYGQLGTG----------------DTQP 235

Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
           R  P  +  L   T+V +A G  H+ A+ ++G VY WG G +GRLG    ++  + +P++
Sbjct: 236 RSYPIPVQGLDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQK 295

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           V++    +++     +S G  +S      G+++ +G+
Sbjct: 296 VNLLAGEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 62/379 (16%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKK 114
            ++R V  G  S + +A+  +G+ +TWG N+RG LGH  + + +  P++V  L+  KI +
Sbjct: 38  FNVRSVVGG--SRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQ 95

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
           A  G  H + V + G + A+G N++GQ G    ++E    PVR  +  V    C    TV
Sbjct: 96  AAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETG-RPVRRDI--VIPKRCAQQLTV 152

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAAL 226
                     + AG         GT +   T++  V    +  P         P  +  L
Sbjct: 153 --------RQVAAG---------GTHSVVLTREGYVWTWGQPWPPGDIKQISVPVRVQGL 195

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             E +  +A G  H +A+   G ++ WG   YG+LG  + +    P  V       ++  
Sbjct: 196 --ENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTLVD- 252

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDS 338
              I+AG  +S+     G++Y WG+ +        N+    M P+ +  L+G ++  +  
Sbjct: 253 ---IAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSC 309

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYG---PYGQKSSAMPKKVDILEGMH--------- 385
           G  H   +  D    S+G   +G LGYG     GQ    +P  +   EG           
Sbjct: 310 GGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTTGQPLE-LPIHIPPPEGRFNHTDEEDDG 368

Query: 386 ---VISVACGYGHSLVIVD 401
                 VACG  H+L IV+
Sbjct: 369 KWIAKHVACGGRHTLAIVE 387



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 93/206 (45%), Gaps = 17/206 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L   ++R +A G    H +A+  +G  + WG NE GQLG GD   R  P  V  
Sbjct: 189 PVRVQGLE--NVRLIAVGAF--HNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPIPVQG 244

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
           L    +    AG  H+  +T +G    +G  +HG+LG G     +++ P  V  L  E +
Sbjct: 245 LDDLTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDI 304

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +CG   +V L+      I + G   +G+LG+G      T    ++L     P     
Sbjct: 305 IQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIHIPPPEGRF 359

Query: 224 AAL----AGETIVK-VACGTNHTVAV 244
                   G+ I K VACG  HT+A+
Sbjct: 360 NHTDEEDDGKWIAKHVACGGRHTLAI 385



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 113/273 (41%), Gaps = 56/273 (20%)

Query: 182 ASILNAGLPQYGQLGHGTDNE------------YNTKD----SSVKLAY----------- 214
            S++  G  + GQLG GTD E            +N +     S   LA            
Sbjct: 5   TSVIAWGSGEDGQLGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWGW 64

Query: 215 ------------EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                       + +  P  + +LA   IV+ A G  H +AVD +G  Y WG   YG+ G
Sbjct: 65  NQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCG 124

Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTAGGGQLYMWGKLKNN 315
               KDE   R V   +R+ V+P           ++AG  +S      G ++ WG+    
Sbjct: 125 EEPSKDE-TGRPV---RRDIVIPKRCAQQLTVRQVAAGGTHSVVLTREGYVWTWGQPWPP 180

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM 374
           GD      P+      N+R +  G  H+  +  D +  +WG+ +YG+LG G    +S  +
Sbjct: 181 GDIKQISVPVRVQGLENVRLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQPRSYPI 240

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           P  V  L+ + ++ +A G  HS  +   TN GE
Sbjct: 241 P--VQGLDDLTLVDIAAGGWHSTAL---TNEGE 268


>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus laevis]
 gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
          Length = 897

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 69/209 (33%), Positives = 101/209 (48%), Gaps = 19/209 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           DI+ V   C   H +A+  E   Y+WG+N+ GQLG G +K +   P  +  LS       
Sbjct: 136 DIQIVQVACGHHHSLALSKESNIYSWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG  H+  +T  G    +G NK GQLG     +  +P+ ++ L S+ +    CG D T 
Sbjct: 196 AAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQKIIYICCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+   G     AG   YGQLGH + +               +  PR +  L G  + ++
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSASH--------------EVNPRKVFELMGNIVTQI 299

Query: 235 ACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
           ACG  HT+A V S G +Y++G GG G+LG
Sbjct: 300 ACGRQHTLAFVPSSGRIYSFGLGGNGQLG 328



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P          ++  G G  HT  V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R +  P  V  L +++  A +CG   T+ L+  +   + + G   +GQ+G  
Sbjct: 64  GQLGHDKSRKK--PEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAAHGQIG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      V +A +    PR I +L+   IV+VACG +H++A+  +  +Y+WG   Y
Sbjct: 118 -----------VSIAEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWGQNQY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E++ E  PR +          P A I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGSEKRKESAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             N+  D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDETDRSDPALLKSLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+L  V
Sbjct: 283 VN--PRKVFELMGNIVTQIACGRQHTLAFV 310



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 154/339 (45%), Gaps = 33/339 (9%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           ++ P R    +  ++R V  GC + H   V  +G  YT G N+ GQLGH DK  R +P  
Sbjct: 22  VIEPRRCDFFINKNVRDV--GCGNRHTGFVLDDGTVYTCGCNDLGQLGH-DK-SRKKPEQ 77

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
           V  L    I     G +HT+ + + G   ++G   HGQ+G     + I  P  ++ L   
Sbjct: 78  VGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDI 137

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           ++   ACG   ++ LS  + ++I + G  QYGQLG G++     K+S+          PR
Sbjct: 138 QIVQVACGHHHSLALS--KESNIYSWGQNQYGQLGLGSEKR---KESA----------PR 182

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            I +L+G     +A G  H+ A+   G ++ WG   +G+LG  ++ D   P  +   +  
Sbjct: 183 HIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQ 242

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDLSGWNLRC 335
            ++     I  G  +++     G ++      +G+L  N+    + P+ + +L G  +  
Sbjct: 243 KII----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVTQ 298

Query: 336 MDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSS 372
           +  G  H   FV +     S+G    G+LG G    K S
Sbjct: 299 IACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKS 337



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 118/277 (42%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  E+   P RC   +   V    CG   T ++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEVVIEPRRCDFFINKNVRDVGCGNRHTGFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +++ +P  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHD----------------KSRKKPEQVGALDAQIIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V++WG   +G++G    +D   VPR +       ++     ++ G  +S   +    +Y
Sbjct: 104 QVFSWGHAAHGQIGVSIAEDYIRVPRNIKSLSDIQIVQ----VACGHHHSLALSKESNIY 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            WG+       L +       P+ +  LSG     + +G  H F    S  I  WG  ++
Sbjct: 160 SWGQNQYGQLGLGSEKRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG      +S   P  +  L    +I + CG  H+
Sbjct: 220 GQLGLNDETDRSD--PALLKSLRSQKIIYICCGEDHT 254



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 81/166 (48%), Gaps = 6/166 (3%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  ++ L G+    +AAG    H  A+ + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 APRHIKSLSGIPFAHIAAG--GGHSFALTISGAIFGWGRNKFGQLGLNDETDRSDPALLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +E+ P  V  L+   VT
Sbjct: 238 SLRSQKIIYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFELMGNIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
             ACG   T+      G  I + GL   GQLG G+ +  N K  S+
Sbjct: 298 QIACGRQHTLAFVPSSG-RIYSFGLGGNGQLGIGSTS--NKKSPSM 340



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+ L    I ++  G    H  A+  EG  +T+G    GQLGH        P  V E
Sbjct: 233 PALLKSLRSQKIIYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSASHEVNPRKVFE 290

Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L    + +   GR HT+  V   G   +FG   +GQLG GS  N+  PS V+
Sbjct: 291 LMGNIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVK 342


>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
          Length = 743

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 67/319 (21%)

Query: 92  HGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI 151
           HG+++  DRP +V  L+   +     G +H+  +T  G+ L +G  ++G+LG G   +++
Sbjct: 1   HGNRMSYDRPKLVEHLNGMSVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQL 60

Query: 152 EPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
            P  V  L+       ACG+     L   +  ++ + G   YG+LG G  +         
Sbjct: 61  RPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GC 113

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
           KL Y+       I +LAG  +VKV CG+  +VA+   G VYTWG G + RLGH       
Sbjct: 114 KLPYK-------IESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVR 166

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG 330
            P++V   Q   ++     I+ GS++    +  G++Y WG    + D+            
Sbjct: 167 RPKKVAALQGKKIIS----IATGSLHCVACSDSGEVYTWG----DNDE------------ 206

Query: 331 WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
                                        G+LG G     +   P+ V  L+G H++ V 
Sbjct: 207 -----------------------------GQLGDGTV--TAIQWPRLVTALQGKHIVKVT 235

Query: 391 CGYGHSLVIVDRTNVGERL 409
           CG  H+L +   + + ERL
Sbjct: 236 CGSAHTLAL-STSQLSERL 253



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 21/241 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L G+ +  +A  C S H  A+   G   TWG+   G+LGHGD   + RP +V  
Sbjct: 10  PKLVEHLNGMSVADIA--CGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEA 67

Query: 107 LSKYKIKK--AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
           L  Y+      G+G + T+ +T+D N  ++G   +G+LG G       P  +  L    V
Sbjct: 68  LLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGV 127

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG+ F+V L+  +  ++   G   + +LGHG+ +                 RP+ +
Sbjct: 128 VKVECGSQFSVALT--KSGAVYTWGKGDFHRLGHGSVDHVR--------------RPKKV 171

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL G+ I+ +A G+ H VA    G VYTWG    G+LG         PR V   Q  ++
Sbjct: 172 AALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHI 231

Query: 284 L 284
           +
Sbjct: 232 V 232



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG      RP  V+ 
Sbjct: 116 PYKIESLAGLGV--VKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAA 173

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L   KI     G  H V  ++ G    +G N  GQLG G++     P  V  L    +  
Sbjct: 174 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQWPRLVTALQGKHIVK 233

Query: 166 TACGADFTVWLSSVE 180
             CG+  T+ LS+ +
Sbjct: 234 VTCGSAHTLALSTSQ 248


>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
          Length = 287

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 113/263 (42%), Gaps = 31/263 (11%)

Query: 41  DGNLVSPTRLRPLVGVD----------------IRFVAAGCVSCHCVAVDVEGRCYTWGR 84
           DG L +  + RP++ +D                   VA  C S H +A+   G  Y+WG 
Sbjct: 13  DGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALAASGAVYSWGW 72

Query: 85  NERGQLGHGDKIQRDRP--TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
              GQLGHGD    + P   +  E +  K+     G  H+  VT+DG    +G +  GQL
Sbjct: 73  GSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKDGTLYMWGESHWGQL 132

Query: 143 GSGSIRNEIEPS-PVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           G          S PV C + E      +   +CG   T  L++     I   G    GQL
Sbjct: 133 GLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHGRVYIWGRG--DSGQL 190

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G+    NT+D S+        RP+ +    GE +V+VACG  H+ AV  KGYVY W  
Sbjct: 191 GIGSTWFNNTEDESLLRT----SRPQLLDGFNGERVVQVACGAFHSAAVTEKGYVYIWXK 246

Query: 256 GGYGRLGHREQKDEWVPRRVDVF 278
             YG LG  +  D   P+    F
Sbjct: 247 EDYGMLGIGQSSDXQNPKSASSF 269



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 104/244 (42%), Gaps = 27/244 (11%)

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           +++  G    GQLG G           V     A   P+ I  L  E +V V+CG+ HT+
Sbjct: 4   AVITFGCNDDGQLGTGAKRRPMLAIDGVS----AANFPQNIDGLQDEEVVAVSCGSRHTM 59

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+ + G VY+WG+G  G+LGH + K   +P++V  F++N +      IS G  +S+    
Sbjct: 60  ALAASGAVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGL--KVNYISCGGCHSAAVTK 117

Query: 303 GGQLYMWGK---------LKNNGDDWMYPKPLMDLSGWNLRCM---DSGNMHHFVGADSS 350
            G LYMWG+          ++       P       G    C+     G  H     +  
Sbjct: 118 DGTLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHG 177

Query: 351 CIS-WGHAQYGELGYGPYGQKSS--------AMPKKVDILEGMHVISVACGYGHSLVIVD 401
            +  WG    G+LG G     ++        + P+ +D   G  V+ VACG  HS  + +
Sbjct: 178 RVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAVTE 237

Query: 402 RTNV 405
           +  V
Sbjct: 238 KGYV 241



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 110/254 (43%), Gaps = 37/254 (14%)

Query: 81  TWGRNERGQLGHGDKIQ----------RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           T+G N+ GQLG G K +           + P  +  L   ++     G  HT+ +   G 
Sbjct: 7   TFGCNDDGQLGTGAKRRPMLAIDGVSAANFPQNIDGLQDEEVVAVSCGSRHTMALAASGA 66

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGASILNA 187
             ++GW   GQLG G +++   P  V        +V   +CG   +   +  +  ++   
Sbjct: 67  VYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSA--AVTKDGTLYMW 124

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   +GQLG   ++E   +   V+      P P     L  E IVKV+CG  HT A+ + 
Sbjct: 125 GESHWGQLGLPKEHEAAHESLPVEC-----PMPE---GLTKECIVKVSCGGTHTAALTNH 176

Query: 248 GYVYTWGFGGYGRLG-----HREQKDEWV-----PRRVDVFQRNNVLPPEAVISAGSVNS 297
           G VY WG G  G+LG         +DE +     P+ +D F    V+     ++ G+ +S
Sbjct: 177 GRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQ----VACGAFHS 232

Query: 298 SCTAGGGQLYMWGK 311
           +     G +Y+W K
Sbjct: 233 AAVTEKGYVYIWXK 246



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 11/158 (6%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVE 76
           K G L   G + W  +G  K     +   P       G+     V   C   H  A+   
Sbjct: 117 KDGTLYMWGESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNH 176

Query: 77  GRCYTWGRNERGQLGHGDK----------IQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           GR Y WGR + GQLG G            ++  RP ++   +  ++ +   G  H+  VT
Sbjct: 177 GRVYIWGRGDSGQLGIGSTWFNNTEDESLLRTSRPQLLDGFNGERVVQVACGAFHSAAVT 236

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           E G    +    +G LG G   +   P        +++
Sbjct: 237 EKGYVYIWXKEDYGMLGIGQSSDXQNPKSASSFFDDIS 274


>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
          Length = 531

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 31/274 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLTTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  +  CL    V
Sbjct: 124 NLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKITNCLHTKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL G  + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P ++       +
Sbjct: 228 AALHGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI-------M 280

Query: 284 LPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
           +  E VI   + +S+ T+     GG +YMWG+ +
Sbjct: 281 VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 76/310 (24%), Positives = 139/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEAGSIRKACVFGTSANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V L++ +G  +   G   Y QLG+GT N             +  
Sbjct: 71  LCGKKIKSLSYGSGPHVLLTTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +++VACG++H++A+ + G ++ WG+   G++G     ++  PR++  
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKI-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSTHT 297



 Score = 45.1 bits (105), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L G+ +  +  G    H +A+  EG  Y WG N  GQLG G K     
Sbjct: 218 NGNQLTPVRVAALHGMCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           PT +    +  I+ A    +HT      G
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQG 304


>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 479

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 155/357 (43%), Gaps = 58/357 (16%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R VA G    + +A+  +G  +  G N  GQLG+G    R  P  V  LS+     AG 
Sbjct: 122 VRAVAGGYQ--YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGG 179

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------- 169
             SH + +  DG   A+G N +GQLG+GS  +   P  V  L   V A A G        
Sbjct: 180 --SHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGL-QGVVAVAGGYMHSLALC 236

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TVW            G   YGQLG+GT                  P P  +  L   
Sbjct: 237 ADGTVWAW----------GFNDYGQLGNGTTVH--------------SPTPVPVPGL--S 270

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +V VA G  H++A+ + G V+ WG  G+G+LG         P RV+  +          
Sbjct: 271 QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLRE------VVA 324

Query: 290 ISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++ G  +S     GG L+ WG     +L N        P P+  L    +  + +G MH 
Sbjct: 325 VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGA--VTSVAAGGMHS 382

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             V AD +  +WG  + G+LG+    ++  A P +V  L+G   ++VA G+ HSL +
Sbjct: 383 VAVQADGTVWAWGRNEEGQLGHERAPER--ATPVRVPGLQGE--VAVAAGFYHSLSV 435



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 146/380 (38%), Gaps = 76/380 (20%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRF 60
           A+   ++ V    G  +    L    T W       G L +G   + +  RP+ G+  R 
Sbjct: 114 AQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS-RA 172

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA      H +A+  +G  + WG N  GQLG+G    R  P  V  L    +     G  
Sbjct: 173 VAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYM 230

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------ADFT 173
           H++ +  DG   A+G+N +GQLG+G+  +   P PV  L   V+  A G       AD T
Sbjct: 231 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGT 290

Query: 174 VW----------------------------------------LSSVEGASILNAGLPQYG 193
           VW                                        L+   G S+ + G    G
Sbjct: 291 VWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSG 350

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG+G+              + +  RP  +  L    +  VA G  H+VAV + G V+ W
Sbjct: 351 QLGNGS--------------FSSSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAW 394

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G    G+LGH    +   P RV   Q       E  ++AG  +S     GG L+ WG L 
Sbjct: 395 GRNEEGQLGHERAPERATPVRVPGLQG------EVAVAAGFYHSLSVQAGGSLWAWG-LN 447

Query: 314 NNGDDWMYPKPLMDL--SGW 331
           + G       PLM +   GW
Sbjct: 448 DFGQLGDSEAPLMPVPAPGW 467


>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
           guttata]
          Length = 991

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 135/303 (44%), Gaps = 38/303 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVS 105
           P  +R L   +I+ V   C   H +A+      ++WG+N+ GQLG G + ++   P ++ 
Sbjct: 128 PRNIRSLS--EIQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKKQTSPQMIK 185

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
            L      +  AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L S+ V 
Sbjct: 186 SLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQKVV 245

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAI 223
              CG D T  L+   G     AG   YGQLGH  T +E N               PR +
Sbjct: 246 HICCGEDHTAALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKV 288

Query: 224 AALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
             L G  + ++ CG  HT A V S G +Y++G GG G+LG     +   P  V    + +
Sbjct: 289 FELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTV----KGS 344

Query: 283 VLP--PEAVISAGSVNSSCT----AGGGQL---YMWGKLKNNGDDWMYPKPLMDLSGWNL 333
            +P  P+  +S  S    C     +GG Q    Y + +     DD+ YP  L  +  W +
Sbjct: 345 WIPFSPQCPMSTDSEECYCVKRIFSGGDQSFAHYFYPQNMVPPDDFRYPDLLKQI--WTV 402

Query: 334 RCM 336
             M
Sbjct: 403 NEM 405



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 147/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-LNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKA 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R RP  V  L    I     G +HT+ + + G   A+G    GQLG       +  P  +
Sbjct: 72  RKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECVRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           R L   ++   ACG   ++ LS  +G+ + + G  +YGQLG G +             Y+
Sbjct: 132 RSLSEIQIVQVACGYYHSLALS--KGSEVFSWGQNKYGQLGLGYE-------------YK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G    ++A G  H+  +   G ++ WG   +G+LG  +  D +VP  +
Sbjct: 177 KQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDDNDRYVPTLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   V+          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVK 342



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 144/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-H 197
           GQLG    R    P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKARK--RPEHVGALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLATDGQLGLP 119

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           GT+              E    PR I +L+   IV+VACG  H++A+     V++WG   
Sbjct: 120 GTE--------------ECVRVPRNIRSLSEIQIVQVACGYYHSLALSKGSEVFSWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   E K +  P+ +    ++ +  P A I+AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGYEYKKQTSPQMI----KSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDDNDRYVPTLLKSLRSQKVVHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  + CG  H+   V
Sbjct: 282 EIN--PRKVFELMGSVVTQITCGRQHTTAFV 310



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 119/277 (42%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  EI   P +    L   V    CG   TV++  ++  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFV--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +A+ RP  + AL  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KARKRPEHVGALDAQNIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            VY WG    G+LG    ++   VPR +       ++     ++ G  +S   + G +++
Sbjct: 104 QVYAWGLATDGQLGLPGTEECVRVPRNIRSLSEIQIVQ----VACGYYHSLALSKGSEVF 159

Query: 308 MWGKLK--NNGDDWMY-----PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQY 359
            WG+ K    G  + Y     P+ +  L G     + +G  H FV   S  I  WG  ++
Sbjct: 160 SWGQNKYGQLGLGYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG          +P  +  L    V+ + CG  H+
Sbjct: 220 GQLGLN--DDNDRYVPTLLKSLRSQKVVHICCGEDHT 254


>gi|340721971|ref|XP_003399386.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
           terrestris]
          Length = 539

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 128/272 (47%), Gaps = 24/272 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P ++  L G  ++  A G    H +A+  EG+ Y+WG N+  +LG+    +   PT++
Sbjct: 68  IYPKKIEALCGKSVKTFAYG-KGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLI 126

Query: 105 -SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--- 160
            S L+   +     G  H++ +T  G   A+G N  GQ+G G+I + ++P P    +   
Sbjct: 127 PSALNNEFVVDIACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLN 186

Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +V   +CG   +V ++  +   + + G    GQLG G                 +Q  
Sbjct: 187 GKKVVHISCGDSSSVAVT--DNGEVYSWGHNGVGQLGIGNCT--------------SQAE 230

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +A  A   I KV CG  HT+A+  +G +Y WG   YG+LG     + W+P ++ V +
Sbjct: 231 PQKVATFAKIVIEKVVCGYMHTLALSDEGDLYVWGANSYGQLGLNTDSNVWIPTKLQVPE 290

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              +L  +   S     S   + G +++MWG+
Sbjct: 291 MGRIL--DIATSHYHHISLAMSEGNRIFMWGQ 320



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 23/266 (8%)

Query: 50  LRPLVGVDIRF-VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           L P    ++R  +  G  +   + V  +   Y  G N  G LG GD      P  +  L 
Sbjct: 18  LEPKFISNVRMAIVYGKAANETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALC 77

Query: 109 KYKIKKAGAGR-SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTA 165
              +K    G+  H + +TE+G   ++G+N + +LG+ S    + P+ +   ++   V  
Sbjct: 78  GKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSALNNEFVVD 137

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-A 224
            ACG   ++ L++     +   G    GQ+G GT            +    QP P+ +  
Sbjct: 138 IACGGHHSLALTN--KGEVYAWGHNVSGQVGCGT------------ILSTVQPIPKLLHI 183

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L G+ +V ++CG + +VAV   G VY+WG  G G+LG      +  P++V  F +   +
Sbjct: 184 VLNGKKVVHISCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAK---I 240

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG 310
             E V+  G +++   +  G LY+WG
Sbjct: 241 VIEKVV-CGYMHTLALSDEGDLYVWG 265



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/294 (24%), Positives = 122/294 (41%), Gaps = 33/294 (11%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
           G   + T++VT+D      G N +G LG+G   + I P  +  L  +   T         
Sbjct: 33  GKAANETLIVTKDDMVYGIGNNTYGCLGTGDTHSTIYPKKIEALCGKSVKTFAYGKGPHV 92

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKV 234
           L+  E   + + G   Y +LG+ + NE  T              P  I +AL  E +V +
Sbjct: 93  LALTEEGKVYSWGYNDYCELGNRSTNEGLT--------------PTLIPSALNNEFVVDI 138

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRL--GHREQKDEWVPRRVDVFQRNNVLPPEAV--I 290
           ACG +H++A+ +KG VY WG    G++  G      + +P+ + +     VL  + V  I
Sbjct: 139 ACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHI-----VLNGKKVVHI 193

Query: 291 SAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
           S G  +S      G++Y WG          N      P+ +   +   +  +  G MH  
Sbjct: 194 SCGDSSSVAVTDNGEVYSWGHNGVGQLGIGNCTSQAEPQKVATFAKIVIEKVVCGYMHTL 253

Query: 345 VGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
             +D      WG   YG+LG       +  +P K+ + E   ++ +A  + H +
Sbjct: 254 ALSDEGDLYVWGANSYGQLGLNT--DSNVWIPTKLQVPEMGRILDIATSHYHHI 305



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 85/196 (43%), Gaps = 20/196 (10%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ I AL G+++   A G   H +A+  +G VY+WG+  Y  LG+R   +   P  +   
Sbjct: 70  PKKIEALCGKSVKTFAYGKGPHVLALTEEGKVYSWGYNDYCELGNRSTNEGLTPTLIPSA 129

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDL------ 328
             N  +     I+ G  +S      G++Y WG   +     G      +P+  L      
Sbjct: 130 LNNEFVVD---IACGGHHSLALTNKGEVYAWGHNVSGQVGCGTILSTVQPIPKLLHIVLN 186

Query: 329 --SGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
                ++ C DS ++   V  +    SWGH   G+LG G     S A P+KV     + +
Sbjct: 187 GKKVVHISCGDSSSVA--VTDNGEVYSWGHNGVGQLGIG--NCTSQAEPQKVATFAKIVI 242

Query: 387 ISVACGYGHSLVIVDR 402
             V CGY H+L + D 
Sbjct: 243 EKVVCGYMHTLALSDE 258


>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 482

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 107/357 (29%), Positives = 155/357 (43%), Gaps = 58/357 (16%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R VA G    + +A+  +G  +  G N  GQLG+G    R  P  V  LS+     AG 
Sbjct: 125 VRAVAGGYQ--YSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLSRAVAVAAGG 182

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------- 169
             SH + +  DG   A+G N +GQLG+GS  +   P  V  L   V A A G        
Sbjct: 183 --SHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGL-QGVVAVAGGYMHSLALC 239

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           AD TVW            G   YGQLG+GT                  P P  +  L   
Sbjct: 240 ADGTVWAW----------GFNDYGQLGNGTTVH--------------SPTPVPVPGL--S 273

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +V VA G  H++A+ + G V+ WG  G+G+LG         P RV+  +          
Sbjct: 274 QVVSVAAGGFHSLALCADGTVWAWGNNGFGQLGEAVSTQRTKPGRVEGLRE------VVA 327

Query: 290 ISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           ++ G  +S     GG L+ WG     +L N        P P+  L    +  + +G MH 
Sbjct: 328 VAGGFYHSLAVRAGGSLWSWGNNYSGQLGNGSFSSSARPAPVQGLGA--VTSVAAGGMHS 385

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             V AD +  +WG  + G+LG+    ++  A P +V  L+G   ++VA G+ HSL +
Sbjct: 386 VAVQADGTVWAWGRNEEGQLGHERAPER--ATPVRVPGLQGE--VAVAAGFYHSLSV 438



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 146/380 (38%), Gaps = 76/380 (20%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRF 60
           A+   ++ V    G  +    L    T W       G L +G   + +  RP+ G+  R 
Sbjct: 117 AQAADQRGVRAVAGGYQYSLALHADGTVWACGSNSAGQLGNGTTAARSAPRPVPGLS-RA 175

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA      H +A+  +G  + WG N  GQLG+G    R  P  V  L    +     G  
Sbjct: 176 VAVAAGGSHALALCADGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQG--VVAVAGGYM 233

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG-------ADFT 173
           H++ +  DG   A+G+N +GQLG+G+  +   P PV  L   V+  A G       AD T
Sbjct: 234 HSLALCADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQVVSVAAGGFHSLALCADGT 293

Query: 174 VW----------------------------------------LSSVEGASILNAGLPQYG 193
           VW                                        L+   G S+ + G    G
Sbjct: 294 VWAWGNNGFGQLGEAVSTQRTKPGRVEGLREVVAVAGGFYHSLAVRAGGSLWSWGNNYSG 353

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG+G+              + +  RP  +  L    +  VA G  H+VAV + G V+ W
Sbjct: 354 QLGNGS--------------FSSSARPAPVQGLG--AVTSVAAGGMHSVAVQADGTVWAW 397

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G    G+LGH    +   P RV   Q       E  ++AG  +S     GG L+ WG L 
Sbjct: 398 GRNEEGQLGHERAPERATPVRVPGLQG------EVAVAAGFYHSLSVQAGGSLWAWG-LN 450

Query: 314 NNGDDWMYPKPLMDL--SGW 331
           + G       PLM +   GW
Sbjct: 451 DFGQLGDSEAPLMPVPAPGW 470


>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
          Length = 432

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 157/377 (41%), Gaps = 50/377 (13%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +G +  P R        +  ++AG  + H VA+       +WGR E GQLGHGD   R  
Sbjct: 3   EGEVTPPPR-------KVLIISAG--ASHSVALLSGEVVCSWGRGEDGQLGHGDAEDRSS 53

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           PT +S L +++I     G  HTV  ++    + ++GW   G+LG G+  +   P P++ L
Sbjct: 54  PTQLSALDEHQIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKAL 113

Query: 160 VS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
               +   ACG      L+      + + G  Q GQLG G     NT+DS V        
Sbjct: 114 HGVMIKQIACGDSHC--LAVTMDGEVQSWGRNQNGQLGLG-----NTEDSLV-------- 158

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P+ I A  G  I  VA G  HT AV   G +Y W  G   + G  ++ D    +     
Sbjct: 159 -PQKIQAFEGIRIKMVAAGAEHTAAVTEDGDLYGWD-GKIWKFGISDRNDRLFLKEYLCC 216

Query: 279 QRN---NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN--- 332
            R+    V+ P       S+          +Y+W +       W        L+ W    
Sbjct: 217 VRDVDGAVMQPHISFLLWSI----------IYLWMEQIWPTRTWRLGGSPCFLTNWKRSA 266

Query: 333 --LRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
                  SG   H   + +D     WG  ++G++G G    + S  P +V   +   V+ 
Sbjct: 267 TAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCS--PVQVRFPDDQKVVQ 324

Query: 389 VACGYGHSLVIVDRTNV 405
           V+CG+ H+L + +R NV
Sbjct: 325 VSCGWRHTLAVTERNNV 341



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 110/284 (38%), Gaps = 39/284 (13%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       +L +P  ++ L GV I+ +A  C   HC+AV ++G   +WGRN+ GQ
Sbjct: 90  WGDFGRLGHGNSSDLFTPLPIKALHGVMIKQIA--CGDSHCLAVTMDGEVQSWGRNQNGQ 147

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN-KHGQLGSGSIR 148
           LG G+      P  +      +IK   AG  HT  VTEDG+   +GW+ K  + G     
Sbjct: 148 LGLGNTEDSLVPQKIQAFEGIRIKMVAAGAEHTAAVTEDGD--LYGWDGKIWKFGISDRN 205

Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
           + +      C V +V         +  L S+    +      +  +LG       N K S
Sbjct: 206 DRLFLKEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLTNWKRS 265

Query: 209 SVKLAYEA----------------------------------QPRPRAIAALAGETIVKV 234
           +     +                                   Q  P  +     + +V+V
Sbjct: 266 ATAFFSQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQV 325

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +CG  HT+AV  +  V+ WG G  G+LG  E  D   P  ++  
Sbjct: 326 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESLDRNSPNIIEAL 369



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W+  G+     + +  SP ++R     D + V   C   H +AV      + WGR   GQ
Sbjct: 294 WNKFGQVGVGNNLDQCSPVQVR--FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQ 351

Query: 90  LGHGDKIQRDRPTIVSELS 108
           LG G+ + R+ P I+  LS
Sbjct: 352 LGIGESLDRNSPNIIEALS 370


>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
          Length = 816

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 123/269 (45%), Gaps = 19/269 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L   ++  +AA     H +A+  +   Y+WG  + G+LGHGD   ++ PT++  
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L    I     G +++  ++ +G    +G   +G+LG G+  + + P+ +  L  E +  
Sbjct: 564 LKGKDIIDVECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDEHIIK 623

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG+ +   L       + + G   YG+LG G                +    PR I  
Sbjct: 624 VACGSFYAHTLCITSQGKVYSWGDGDYGKLGRG--------------GSDGSKLPRLIEK 669

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    IV+V CG   +VA+   G+VYTWG G   +LGH  +++   P  V+V +   V+ 
Sbjct: 670 LQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKVVG 729

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
               +S G  +       G++Y WGK +N
Sbjct: 730 ----VSLGVSHVLALTDQGEVYGWGKNEN 754



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 25/201 (12%)

Query: 220 PRAIAALAGETIVKVACGT--NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+ + AL  + ++K+A      H +A+     VY+WG G  GRLGH +   +  P  +  
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALTKDYEVYSWGNGDGGRLGHGDTSTKEEPTLIQA 563

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
            +  +++     +  G   S+  +  G LY WG+           +D + P  +  LS  
Sbjct: 564 LKGKDIID----VECGGTYSAAISANGALYTWGRGNYGRLGHGTAEDCLTPTMISALSDE 619

Query: 332 NLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           ++  +  G+ +    A + CI       SWG   YG+LG G  G   S +P+ ++ L+ +
Sbjct: 620 HIIKVACGSFY----AHTLCITSQGKVYSWGDGDYGKLGRG--GSDGSKLPRLIEKLQNV 673

Query: 385 HVISVACGYGHSLVIVDRTNV 405
            ++ V CG   S+ + +  +V
Sbjct: 674 KIVQVYCGAQFSVALSEDGHV 694



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 17/200 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++PT +  L    I  VA G    H + +  +G+ Y+WG  + G+LG G       P ++
Sbjct: 608 LTPTMISALSDEHIIKVACGSFYAHTLCITSQGKVYSWGDGDYGKLGRGGSDGSKLPRLI 667

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EV 163
            +L   KI +   G   +V ++EDG+   +G  +  +LG  +  N   P  V  L   +V
Sbjct: 668 EKLQNVKIVQVYCGAQFSVALSEDGHVYTWGKGEGWKLGHPTEENVRFPEMVEVLRDRKV 727

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              + G    + L+             Q    G G +      DSS     +    PR I
Sbjct: 728 VGVSLGVSHVLALTD------------QGEVYGWGKNENKQICDSSELFVQQ----PRLI 771

Query: 224 AALAGETIVKVACGTNHTVA 243
            AL G+ +V V CG   + A
Sbjct: 772 EALKGQKVVGVCCGPAQSFA 791


>gi|213626735|gb|AAI69997.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 76/308 (24%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G+L   GS  W  +G   G+    +  PT ++ L    + F  A C   H +    +G+ 
Sbjct: 56  GKLYVFGSNNWGQLGLEAGSA---ISKPTCVKALKSEKVVF--ASCGRNHTLLYTEQGKL 110

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRS------------------ 120
           Y+ G N  GQLG GD   R     +S   ++YKIK+  AG +                  
Sbjct: 111 YSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNS 170

Query: 121 --------------------------------HTVVVTEDGNSLAFGWNKHGQLG--SGS 146
                                           H+  VT+DG    FG  ++G+LG  S  
Sbjct: 171 EGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDK 230

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           ++   +P  V  L  +V   +CG + T+ ++  E   +   GL Q+GQLGHGT       
Sbjct: 231 LKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEKE---VYTFGLGQFGQLGHGT------- 280

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                  +E Q  P+A+  L  +TI+ V CG NHT  +  KG +YT+G G +G+LG  E+
Sbjct: 281 -----FIFETQ-LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEE 334

Query: 267 K--DEWVP 272
              +++VP
Sbjct: 335 NFTNQFVP 342



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 142/294 (48%), Gaps = 32/294 (10%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G  HTV+VT +G    FG N  GQLG  +     +P+ V+ L SE V   +CG + T+  
Sbjct: 45  GDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHTLLY 104

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VA 235
           +  E   + ++G    GQLG G        D+S + +++       I+    +  +K ++
Sbjct: 105 T--EQGKLYSSGGNSEGQLGLG--------DTSGRTSFQE------ISFFNTQYKIKQLS 148

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G+N + A+   G ++ WG    G+LG  ++     P+++D+ +      P + IS G  
Sbjct: 149 AGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQKIDIGK------PISWISCGYY 202

Query: 296 NSSCTAGGGQLYMWGKLKNN-----GDDWMYPKPLMDLSGWN--LRCMDSGNMHHFVGAD 348
           +S+     G+LY +G+ +N       D     K    +SG +  ++ +  G  H     +
Sbjct: 203 HSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTE 262

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               ++G  Q+G+LG+G +  ++  +PK VD+L    ++ V CG  H+ VI D+
Sbjct: 263 KEVYTFGLGQFGQLGHGTFIFETQ-LPKAVDVLTKKTILYVTCGENHTAVITDK 315



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 72/299 (24%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +SC   H V V   G+ Y +G N  GQLG        +PT V  L   K+  A  GR+HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTA-TACGADFTV-- 174
           ++ TE G   + G N  GQLG G         EI     +  + +++A +   A  TV  
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDG 161

Query: 175 ----------------------------------WLS--------SVEGASILNAGLPQY 192
                                             W+S          +   +   G P+ 
Sbjct: 162 KLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPEN 221

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LG  +D              +   +P+ ++ L+G+  + V+CG  HT+AV  K  VYT
Sbjct: 222 GKLGLPSD------------KLKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTEK-EVYT 267

Query: 253 WGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           +G G +G+LGH     E  +P+ VDV  +  +L     ++ G  +++     G LY +G
Sbjct: 268 FGLGQFGQLGHGTFIFETQLPKAVDVLTKKTIL----YVTCGENHTAVITDKGLLYTFG 322


>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 1859

 Score =  104 bits (260), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 94/350 (26%), Positives = 147/350 (42%), Gaps = 40/350 (11%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNE-----RGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           C S +  A+   G  Y WGR          LG+G    +  PT V  LS+  +     G 
Sbjct: 631 CGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSEVVL--VSIGY 688

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
            H+  +  +G  L +G  + GQLG G + N+  P  V+ + S  VT   CG   T+ L+ 
Sbjct: 689 YHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPKVVQTMTSHWVTQVQCGEKHTICLT- 747

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
            +   +   G  +YGQLG G D + N               P  + +L    I+++ACG+
Sbjct: 748 -KNGKVFTWGTSEYGQLGLG-DTQKNCT-------------PMLVTSLEKYNIIQIACGS 792

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H   + +   V  +G G    +G        VP  V   +  N+      +S G  +++
Sbjct: 793 THCAVLTNAREVLVFGNGA--AMGSANIIS--VPMMVPALKHLNI----ERLSCGHYSTA 844

Query: 299 CTAGGGQLYMWGKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-S 353
                G +Y WG  +  G       ++PK +  L   ++R +  G  H     DS  I +
Sbjct: 845 ALTECGDVYTWGSGQELGHGTNQSELHPKLVDGLRSQSIRQISCGGRHMAFLTDSGKIYT 904

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
            G   +G+LG+    Q     PKK+D L     ISV+CG  H+  + D T
Sbjct: 905 CGKDPFGQLGHA---QGDQNKPKKIDSLLKTTFISVSCGENHNASLFDTT 951



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 20/203 (9%)

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG-----YGRLGHREQKDE 269
           ++Q  P  +       I  ++CG+ ++ A+   G VY WG G         LG+   +D+
Sbjct: 610 QSQATPERLPNFNIPEICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQ 669

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPK 323
            +P +V+       L    ++S G  +S+     G+L  WG  ++    +GD  +   PK
Sbjct: 670 LLPTKVE------SLSEVVLVSIGYYHSAALKSNGELLTWGCGEDGQLGHGDVLNQTIPK 723

Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            +  ++   +  +  G  H   +  +    +WG ++YG+LG G    + +  P  V  LE
Sbjct: 724 VVQTMTSHWVTQVQCGEKHTICLTKNGKVFTWGTSEYGQLGLG--DTQKNCTPMLVTSLE 781

Query: 383 GMHVISVACGYGHSLVIVDRTNV 405
             ++I +ACG  H  V+ +   V
Sbjct: 782 KYNIIQIACGSTHCAVLTNAREV 804


>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
 gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
           domain containing protein 1 [Bos taurus]
          Length = 531

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 IEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT+      FG N    LG+G   + + P  +  
Sbjct: 11  TLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GL 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  I+ A    +HT      G
Sbjct: 276 PAHIMVEKERVIEIAACHSAHTSAAKTQG 304


>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
          Length = 531

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 IEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 136/310 (43%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT+      FG N    LG+G   + + P  +  
Sbjct: 11  TLLSPHEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GL 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  I+ A    +HT      G
Sbjct: 276 PAHIMVEKERVIEIAACHSAHTSAAKTQG 304


>gi|148228601|ref|NP_001089142.1| retinitis pigmentosa GTPase regulator [Xenopus laevis]
 gi|77808101|gb|ABB03732.1| RPGR [Xenopus laevis]
          Length = 727

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 132/308 (42%), Gaps = 76/308 (24%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G+L   GS  W  +G   G+    +  PT ++ L    + F  A C   H +    +G+ 
Sbjct: 56  GKLYVFGSNNWGQLGLEAGSA---ISKPTCVKALKSEKVVF--ASCGRNHTLLYTEQGKL 110

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRS------------------ 120
           Y+ G N  GQLG GD   R     +S   ++YKIK+  AG +                  
Sbjct: 111 YSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNS 170

Query: 121 --------------------------------HTVVVTEDGNSLAFGWNKHGQLG--SGS 146
                                           H+  VT+DG    FG  ++G+LG  S  
Sbjct: 171 EGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDK 230

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           ++   +P  V  L  +V   +CG + T+ ++  E   +   GL Q+GQLGHGT       
Sbjct: 231 LKKHKKPQRVSGLSGKVKIVSCGGEHTIAVTEKE---VYTFGLGQFGQLGHGT------- 280

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                  +E Q  P+A+  L  +TI+ V CG NHT  +  KG +YT+G G +G+LG  E+
Sbjct: 281 -----FIFETQ-LPKAVDVLTKKTILYVTCGENHTAVITDKGLLYTFGDGRHGKLGLGEE 334

Query: 267 K--DEWVP 272
              +++VP
Sbjct: 335 NFTNQFVP 342



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 83/316 (26%), Positives = 149/316 (47%), Gaps = 43/316 (13%)

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
           ++ DRP  +S            G  HTV+VT +G    FG N  GQLG  +     +P+ 
Sbjct: 34  LKNDRPAHIS-----------CGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTC 82

Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           V+ L SE V   +CG + T+  +  E   + ++G    GQLG G        D+S + ++
Sbjct: 83  VKALKSEKVVFASCGRNHTLLYT--EQGKLYSSGGNSEGQLGLG--------DTSGRTSF 132

Query: 215 EAQPRPRAIAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
           +       I+    +  +K ++ G+N + A+   G ++ WG    G+LG  ++     P+
Sbjct: 133 QE------ISFFNTQYKIKQLSAGSNTSAALTVDGKLFMWGDNSEGQLGLEKEAIYSTPQ 186

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN-----GDDWMYPKPLMDL 328
           ++D+ +      P + IS G  +S+     G+LY +G+ +N       D     K    +
Sbjct: 187 KIDIGK------PISWISCGYYHSAFVTQDGELYTFGEPENGKLGLPSDKLKKHKKPQRV 240

Query: 329 SGWN--LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           SG +  ++ +  G  H     +    ++G  Q+G+LG+G +  ++  +PK VD+L    +
Sbjct: 241 SGLSGKVKIVSCGGEHTIAVTEKEVYTFGLGQFGQLGHGTFIFETQ-LPKAVDVLTKKTI 299

Query: 387 ISVACGYGHSLVIVDR 402
           + V CG  H+ VI D+
Sbjct: 300 LYVTCGENHTAVITDK 315



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 72/299 (24%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +SC   H V V   G+ Y +G N  GQLG        +PT V  L   K+  A  GR+HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGLEAGSAISKPTCVKALKSEKVVFASCGRNHT 101

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTA-TACGADFTV-- 174
           ++ TE G   + G N  GQLG G         EI     +  + +++A +   A  TV  
Sbjct: 102 LLYTEQGKLYSSGGNSEGQLGLGDTSGRTSFQEISFFNTQYKIKQLSAGSNTSAALTVDG 161

Query: 175 ----------------------------------WLS--------SVEGASILNAGLPQY 192
                                             W+S          +   +   G P+ 
Sbjct: 162 KLFMWGDNSEGQLGLEKEAIYSTPQKIDIGKPISWISCGYYHSAFVTQDGELYTFGEPEN 221

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LG  +D              +   +P+ ++ L+G+  + V+CG  HT+AV  K  VYT
Sbjct: 222 GKLGLPSD------------KLKKHKKPQRVSGLSGKVKI-VSCGGEHTIAVTEK-EVYT 267

Query: 253 WGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           +G G +G+LGH     E  +P+ VDV  +  +L     ++ G  +++     G LY +G
Sbjct: 268 FGLGQFGQLGHGTFIFETQLPKAVDVLTKKTIL----YVTCGENHTAVITDKGLLYTFG 322


>gi|444915451|ref|ZP_21235583.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444713382|gb|ELW54282.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 746

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 136/305 (44%), Gaps = 36/305 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G    WG N  GQLG G   QR  P  VS L+   +  +G    H + +  D
Sbjct: 456 HSLALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNV-VALSGGKLYHALALLSD 514

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G+N +GQLG GS  N   P  V  L + V A A G D+++ L S    ++ + G
Sbjct: 515 GTVRAWGYNMNGQLGDGSTSNRWTPVAVSGL-TNVVAIAAGGDYSLALQS--NGTVQSWG 571

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              YG LG     +Y+T            P P+A+  +    +V +A G NH +A+ + G
Sbjct: 572 YGVYGPLGR----DYDTY----------SPTPKAVPGV--TNVVAIAAGANHVLALRADG 615

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            VY WG   +G+LG         P  V V    NV+     I+ G  +S      G +Y 
Sbjct: 616 TVYAWGRNDFGQLGDGTTVQRNTP--VQVPGLTNVV----AIATGWDHSLALRADGTVYA 669

Query: 309 WG----KLKNNGDDWMY---PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYG 360
           WG    +   +G    Y   P P+  L+  N+  + +G         S  + +WG   +G
Sbjct: 670 WGYNYARQLGDGSTANYRQTPAPVPGLT--NVVAVTAGGNQSLALLSSGAVHAWGDNSHG 727

Query: 361 ELGYG 365
           ELG G
Sbjct: 728 ELGNG 732



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 159/362 (43%), Gaps = 44/362 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  +  L GV    VA    + H +A+  +G    WG N  GQLG G   QR  P  V+
Sbjct: 137 SPGAVPGLSGV----VAIAAGNNHALALLSDGTVRAWGYNAYGQLGDGTTTQRRTP--VA 190

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L    +    AG +H++ V  DG   A+G N +G+LG G+      P  V  L + VTA
Sbjct: 191 VLGLTGVVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVSSL-TGVTA 249

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A GA+ +  L+ +   ++   G    G+LG GT  +  T              P A+  
Sbjct: 250 IAAGANHS--LAVLADGTVRAWGYNASGRLGDGTTTQRAT--------------PVAVPG 293

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G  + +++ G  H++A+ + G    WG    G+LG     +   P  V      + L 
Sbjct: 294 LTG--VTEISAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLV------SSLT 345

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSG 339
               +SAG  +S      G    WG   +   GD        P  L  L+G  +  + +G
Sbjct: 346 GVTALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPVGLPGLTG--VAALAAG 403

Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H   V A+ +  +WGH  YG+LG G   Q+++  P  V  L G  V+S+  GY HSL 
Sbjct: 404 GYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTA--PVVVPALTG--VVSLTAGYDHSLA 459

Query: 399 IV 400
           ++
Sbjct: 460 LL 461



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 106/357 (29%), Positives = 151/357 (42%), Gaps = 40/357 (11%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           RPL     R V       H +    +G    WG N  GQLG G   QR  PT V  L+  
Sbjct: 38  RPLRSGSPRAVRLASGKAHSLLATPDGTVRAWGDNASGQLGDGTTTQRSSPTAVPGLAGA 97

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
               AG    +++ +  DG   A+G N +GQLG G+  +   P  V  L S V A A G 
Sbjct: 98  VAVSAGG--EYSLALLGDGTVRAWGNNTYGQLGDGTTPHRASPGAVPGL-SGVVAIAAGN 154

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +  + L  +   ++   G   YGQLG GT  +  T              P A+  L G  
Sbjct: 155 NHALAL--LSDGTVRAWGYNAYGQLGDGTTTQRRT--------------PVAVLGLTG-- 196

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +V +A G NH++AV + G V  WG   YGRLG         P  V      + L     I
Sbjct: 197 VVAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLV------SSLTGVTAI 250

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF 344
           +AG+ +S      G +  WG   +   GD        P  +  L+G  +  + +G  H  
Sbjct: 251 AAGANHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTG--VTEISAGGGHSL 308

Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            + AD +  +WG    G+LG G    ++S  P  V  L G  V +++ G  HSL ++
Sbjct: 309 ALLADGTARAWGSNVSGQLGDGTVSNRTS--PVLVSSLTG--VTALSAGGNHSLALL 361



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 156/363 (42%), Gaps = 41/363 (11%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  SP  +  L GV     A      H +A+  +G    WG N  GQLG G   QR  P 
Sbjct: 334 NRTSPVLVSSLTGV----TALSAGGNHSLALLADGTARAWGANVSGQLGDGTTTQRTLPV 389

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            +  L+   +    AG  H++ V  +G   A+G N +GQLG GS      P  V  L   
Sbjct: 390 GLPGLTG--VAALAAGGYHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVPALTGV 447

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+ TA G D ++ L  +   ++   G    GQLG GT N+  T      L          
Sbjct: 448 VSLTA-GYDHSLAL--LSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTN-------- 496

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           + AL+G  +        H +A+ S G V  WG+   G+LG     + W P  V V    N
Sbjct: 497 VVALSGGKLY-------HALALLSDGTVRAWGYNMNGQLGDGSTSNRWTP--VAVSGLTN 547

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCMD 337
           V+     I+AG   S      G +  WG      L  + D +  P P       N+  + 
Sbjct: 548 VV----AIAAGGDYSLALQSNGTVQSWGYGVYGPLGRDYDTYS-PTPKAVPGVTNVVAIA 602

Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +G  H   + AD +  +WG   +G+LG G   Q+++  P +V  L   +V+++A G+ HS
Sbjct: 603 AGANHVLALRADGTVYAWGRNDFGQLGDGTTVQRNT--PVQVPGLT--NVVAIATGWDHS 658

Query: 397 LVI 399
           L +
Sbjct: 659 LAL 661



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 160/407 (39%), Gaps = 85/407 (20%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  +  L GV    VA      H +AV  +G    WG N  G+LG G   QR  P +VS
Sbjct: 187 TPVAVLGLTGV----VAIAAGENHSLAVLADGTVRAWGNNTYGRLGDGTTTQRTSPVLVS 242

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV--------- 156
            L+      AGA  +H++ V  DG   A+G+N  G+LG G+      P  V         
Sbjct: 243 SLTGVTAIAAGA--NHSLAVLADGTVRAWGYNASGRLGDGTTTQRATPVAVPGLTGVTEI 300

Query: 157 -------RCLVSEVTATACGADFT--------------VWLSSVEGASILNA-------- 187
                    L+++ TA A G++ +              V +SS+ G + L+A        
Sbjct: 301 SAGGGHSLALLADGTARAWGSNVSGQLGDGTVSNRTSPVLVSSLTGVTALSAGGNHSLAL 360

Query: 188 ---------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                    G    GQLG GT  +              +  P  +  L G  +  +A G 
Sbjct: 361 LADGTARAWGANVSGQLGDGTTTQ--------------RTLPVGLPGLTG--VAALAAGG 404

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H++AV + G V  WG   YG+LG         P  V        L     ++AG  +S 
Sbjct: 405 YHSLAVLANGTVRAWGHNTYGQLGDGSTAQRTAPVVVP------ALTGVVSLTAGYDHSL 458

Query: 299 CTAGGGQLYMWGKLKN----NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCI 352
                G +  WG   +    +G       P+      N+  +  G ++H +   +D +  
Sbjct: 459 ALLSDGTVRAWGNNASGQLGDGTTNQRGTPVQVSGLTNVVALSGGKLYHALALLSDGTVR 518

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +WG+   G+LG G    + +  P  V  L   +V+++A G  +SL +
Sbjct: 519 AWGYNMNGQLGDGSTSNRWT--PVAVSGLT--NVVAIAAGGDYSLAL 561



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 8/145 (5%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
            ++  +AAG    H +A+  +G  Y WGRN+ GQLG G  +QR+ P  V  L+   +   
Sbjct: 596 TNVVAIAAGA--NHVLALRADGTVYAWGRNDFGQLGDGTTVQRNTPVQVPGLT--NVVAI 651

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSEVTATACGADFTV 174
             G  H++ +  DG   A+G+N   QLG GS  N  + P+PV  L + V  TA G     
Sbjct: 652 ATGWDHSLALRADGTVYAWGYNYARQLGDGSTANYRQTPAPVPGLTNVVAVTAGGNQSLA 711

Query: 175 WLSSVEGASILNAGLPQYGQLGHGT 199
            LSS    ++   G   +G+LG+G+
Sbjct: 712 LLSS---GAVHAWGDNSHGELGNGS 733


>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
 gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
          Length = 1164

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 136/306 (44%), Gaps = 58/306 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L G  ++ +A G    H VA+  +G  +TWG N  GQLG      R  P  VS 
Sbjct: 672 PGKVINLTG--MKMIAGG--ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVST 727

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L+ +      AG +H++ +  DG   AFG+N +GQLG G+  ++  P  V+ L   V A 
Sbjct: 728 LTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG-VVAI 784

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA- 225
           A G DF++ L S    ++ + G   YG+LG+GT     T  SSV +        +AIAA 
Sbjct: 785 AAGKDFSLALKS--DGTVWSWGQNTYGELGNGT-----TTRSSVPVQVALLTDVKAIAAG 837

Query: 226 ------------------------------------LAGETIVK-VACGTNHTVAVDSKG 248
                                                +G T +K +A G  HT+A+ S G
Sbjct: 838 DYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDG 897

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V++WG+ GYG+LG+       VP  +        L   A I+AG   S      G LY 
Sbjct: 898 TVWSWGYNGYGQLGNGNNTSRSVPAAIP------GLASIASIAAGENQSIAYGNDGILYS 951

Query: 309 WGKLKN 314
           WG+  N
Sbjct: 952 WGRNAN 957



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           +A   +  H + +  +G  + WG N  GQLG G       P  V  L+  K+     G +
Sbjct: 632 LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM--IAGGEN 689

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
           HTV +  DG    +G+N +GQLG  S      P  V  L +  TA + G + ++ L S  
Sbjct: 690 HTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL-TNWTAVSAGENHSLALKS-- 746

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
             ++   G   YGQLG GT                +Q  P  +  L G  +V +A G + 
Sbjct: 747 DGTVWAFGYNGYGQLGDGTT--------------SSQRTPVQVKDLTG--VVAIAAGKDF 790

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           ++A+ S G V++WG   YG LG+       VP +V       +L     I+AG  +    
Sbjct: 791 SLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA------LLTDVKAIAAGDYHGVAL 844

Query: 301 AGGGQLYMWGKLKN----NGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISW 354
              G ++ WG   N    N        P+   ++G  ++ + +G  H   + +D +  SW
Sbjct: 845 KKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSW 902

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G+  YG+LG G     S ++P  +  L    + S+A G   S+
Sbjct: 903 GYNGYGQLGNG--NNTSRSVPAAIPGL--ASIASIAAGENQSI 941



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P +++ L GV    VA        +A+  +G  ++WG+N  G+LG+G   +   P  V+
Sbjct: 771 TPVQVKDLTGV----VAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA 826

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L+   +K   AG  H V + +DG+  A+G+N +G+LG+ S  ++   +PV+  V+ +  
Sbjct: 827 LLTD--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ--STPVQSGVTGIKG 882

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G   T+ L S    ++ + G   YGQLG+G     N    SV         P AI  
Sbjct: 883 IAAGPYHTLALKS--DGTVWSWGYNGYGQLGNG-----NNTSRSV---------PAAIPG 926

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           LA  +I  +A G N ++A  + G +Y+WG    G+LG+    D  VP +V
Sbjct: 927 LA--SIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 974



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 19/201 (9%)

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
           KD++   +  + P     +A  G   + V+   NHT+ + S G V+ WG+ G+G+LG   
Sbjct: 606 KDTAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT 665

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWM 320
                VP +V        L    +I+ G  ++      G L+ W     G+L ++     
Sbjct: 666 SNSTSVPGKVI------NLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTR 719

Query: 321 Y-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           Y P  +  L+ W    + +G  H   + +D +  ++G+  YG+LG G     S   P +V
Sbjct: 720 YSPVQVSTLTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGT--TSSQRTPVQV 775

Query: 379 DILEGMHVISVACGYGHSLVI 399
             L G  V+++A G   SL +
Sbjct: 776 KDLTG--VVAIAAGKDFSLAL 794


>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Ailuropoda melanoleuca]
          Length = 348

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEITSIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Canis lupus familiaris]
          Length = 531

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|301117542|ref|XP_002906499.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262107848|gb|EEY65900.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1711

 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 143/300 (47%), Gaps = 33/300 (11%)

Query: 50  LRPLVGVD---IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVS 105
           LRP+  +    ++F+AA     H +A+   G  Y+WG N+RGQLGH +   +   P ++ 
Sbjct: 398 LRPVQALRSQRVKFIAASNGCEHMIALTDSGLAYSWGYNDRGQLGHENLTTKVHVPKLIE 457

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K++ A     H+ V+T+ G   AFG N  GQLG    +++  P  V+    +E++
Sbjct: 458 SLKDKKLRYASVSYHHSAVITDSGELYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEIS 517

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG   T+  ++  G  +   G   YGQLG G + +       +K+A        ++ 
Sbjct: 518 MVACGLYHTIICTATGG--LFACGKNDYGQLGLGHNRQ-------IKVA--------SLV 560

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           +L  E +  VA G  H+V V + G  +++G   YG+LG   +  + VP  V +     ++
Sbjct: 561 SLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLGIGNKVHQNVPNVVALSANTRMV 620

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPLMDLSGWN-LRCMD 337
                 + G  ++   +  GQ++++G+     L N G  D + P PL      N  RC+D
Sbjct: 621 ----RATCGCYHTVLLSEQGQVFVFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVD 676



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 147/342 (42%), Gaps = 31/342 (9%)

Query: 74  DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           +  G  Y+ G+N  G+LG GD I+R + T +S      I++  +G     V+T DG  L 
Sbjct: 318 EASGELYSCGQNSYGELGTGDDIERHQLTSISLCGWDDIRQVASGNETLAVLTNDGVVLT 377

Query: 134 FGWNKHGQLGSGSIRNEIEP-SPVRCLVSE---VTATACGADFTVWLSSVEGASILNAGL 189
            G NK GQ G G     +    PV+ L S+     A + G +  + L+  +     + G 
Sbjct: 378 CGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALT--DSGLAYSWGY 435

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
              GQLGH    E  T    V         P+ I +L  + +   +   +H+  +   G 
Sbjct: 436 NDRGQLGH----ENLTTKVHV---------PKLIESLKDKKLRYASVSYHHSAVITDSGE 482

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS-SCTAGGGQLYM 308
           +Y +G    G+LG    + +  P+ V  F+   +    ++++ G  ++  CTA GG    
Sbjct: 483 LYAFGMNDCGQLGLDHTQHQSTPQLVKGFEGTEI----SMVACGLYHTIICTATGGLFAC 538

Query: 309 ----WGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELG 363
               +G+L    +  +    L+ L    +  + SG  H  V  +S    S+G   YG+LG
Sbjct: 539 GKNDYGQLGLGHNRQIKVASLVSLPNEMVSYVASGYYHSVVVTNSGRTFSFGRNDYGQLG 598

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G   +    +P  V +     ++   CG  H++++ ++  V
Sbjct: 599 IG--NKVHQNVPNVVALSANTRMVRATCGCYHTVLLSEQGQV 638


>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
          Length = 531

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT+      FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEVASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
 gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
          Length = 1239

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 136/306 (44%), Gaps = 58/306 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G  ++ +A G    H VA+  +G  +TWG N  GQLG      R  P  VS 
Sbjct: 747  PGKVINLTG--MKMIAGG--ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVST 802

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
            L+ +      AG +H++ +  DG   AFG+N +GQLG G+  ++  P  V+ L   V A 
Sbjct: 803  LTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG-VVAI 859

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA- 225
            A G DF++ L S    ++ + G   YG+LG+GT     T  SSV +        +AIAA 
Sbjct: 860  AAGKDFSLALKS--DGTVWSWGQNTYGELGNGT-----TTRSSVPVQVALLTDVKAIAAG 912

Query: 226  ------------------------------------LAGETIVK-VACGTNHTVAVDSKG 248
                                                 +G T +K +A G  HT+A+ S G
Sbjct: 913  DYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDG 972

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             V++WG+ GYG+LG+       VP  +        L   A I+AG   S      G LY 
Sbjct: 973  TVWSWGYNGYGQLGNGNNTSRSVPAAIP------GLASIASIAAGENQSIAYGNDGILYS 1026

Query: 309  WGKLKN 314
            WG+  N
Sbjct: 1027 WGRNAN 1032



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
            +A   +  H + +  +G  + WG N  GQLG G       P  V  L+  K+     G +
Sbjct: 707  LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM--IAGGEN 764

Query: 121  HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
            HTV +  DG    +G+N +GQLG  S      P  V  L +  TA + G + ++ L S  
Sbjct: 765  HTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL-TNWTAVSAGENHSLALKS-- 821

Query: 181  GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              ++   G   YGQLG GT                +Q  P  +  L G  +V +A G + 
Sbjct: 822  DGTVWAFGYNGYGQLGDGTT--------------SSQRTPVQVKDLTG--VVAIAAGKDF 865

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            ++A+ S G V++WG   YG LG+       VP +V       +L     I+AG  +    
Sbjct: 866  SLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA------LLTDVKAIAAGDYHGVAL 919

Query: 301  AGGGQLYMWGKLKN----NGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISW 354
               G ++ WG   N    N        P+   ++G  ++ + +G  H   + +D +  SW
Sbjct: 920  KKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSW 977

Query: 355  GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+  YG+LG G     S ++P  +  L    + S+A G   S+
Sbjct: 978  GYNGYGQLGNG--NNTSRSVPAAIPGL--ASIASIAAGENQSI 1016



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/230 (30%), Positives = 116/230 (50%), Gaps = 26/230 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P +++ L GV    VA        +A+  +G  ++WG+N  G+LG+G   +   P  V+
Sbjct: 846  TPVQVKDLTGV----VAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA 901

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             L+   +K   AG  H V + +DG+  A+G+N +G+LG+ S  ++   +PV+  V+ +  
Sbjct: 902  LLTD--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ--STPVQSGVTGIKG 957

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             A G   T+ L S    ++ + G   YGQLG+G     N    SV         P AI  
Sbjct: 958  IAAGPYHTLALKS--DGTVWSWGYNGYGQLGNG-----NNTSRSV---------PAAIPG 1001

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            LA  +I  +A G N ++A  + G +Y+WG    G+LG+    D  VP +V
Sbjct: 1002 LA--SIASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1049



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 19/201 (9%)

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
           KD++   +  + P     +A  G   + V+   NHT+ + S G V+ WG+ G+G+LG   
Sbjct: 681 KDTAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT 740

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWM 320
                VP +V        L    +I+ G  ++      G L+ W     G+L ++     
Sbjct: 741 SNSTSVPGKVI------NLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTR 794

Query: 321 Y-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           Y P  +  L+ W    + +G  H   + +D +  ++G+  YG+LG G     S   P +V
Sbjct: 795 YSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQLGDGT--TSSQRTPVQV 850

Query: 379 DILEGMHVISVACGYGHSLVI 399
             L G  V+++A G   SL +
Sbjct: 851 KDLTG--VVAIAAGKDFSLAL 869


>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
          Length = 531

 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTTNQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|330845272|ref|XP_003294517.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
 gi|325075008|gb|EGC28958.1| hypothetical protein DICPUDRAFT_159521 [Dictyostelium purpureum]
          Length = 594

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 125/271 (46%), Gaps = 19/271 (7%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP +    + + I+ +A G      +A +  G  Y+WG N  GQLG GD+I R++PT ++
Sbjct: 96  SPVQFSIDIKISIKTIACGDSHTLAIAENPYG-LYSWGCNRWGQLGLGDQINRNQPTRIN 154

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
              +        G  H+++V+  G    FG    G+LG G      +P+ V  LV +   
Sbjct: 155 HSDRATFVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGK-QI 213

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            +CGA             I + G  +YGQLG G          SVK ++    + +    
Sbjct: 214 VSCGAGVMHSSCVDSTGKIYSFGWNRYGQLGTG----------SVK-SHTLPAKMKETQI 262

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
            +    VKV CG NHT+A+ + G + ++GF   G+LG     D+  P +++  ++  VL 
Sbjct: 263 TSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGVGSHLDQINPTKIEFSEK--VLD 320

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
               I+ G  +S C    G+ Y WG + + G
Sbjct: 321 ----IATGYYHSLCVTDNGEAYSWGYMSDGG 347



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 105/212 (49%), Gaps = 26/212 (12%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           FVA  C S H + V   G  YT+G    G+LG GD+  R +PT+VS L   +I   GAG 
Sbjct: 161 FVAIACGSQHSMIVSNFGELYTFGCGTTGRLGLGDESPRFKPTVVSSLVGKQIVSCGAGV 220

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA------TACGADFT 173
            H+  V   G   +FGWN++GQLG+GS+++   P+ ++   +++T+        CG + T
Sbjct: 221 MHSSCVDSTGKIYSFGWNRYGQLGTGSVKSHTLPAKMK--ETQITSKMHFVKVVCGKNHT 278

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + LS+     +++ G    GQLG G              ++  Q  P  I     E ++ 
Sbjct: 279 LALSN--NGEMVSFGFNACGQLGVG--------------SHLDQINPTKIE--FSEKVLD 320

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
           +A G  H++ V   G  Y+WG+   G LG  E
Sbjct: 321 IATGYYHSLCVTDNGEAYSWGYMSDGGLGLSE 352



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 76  EGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL- 132
           +G  Y+WG N  GQ G+G    I    P   S   K  IK    G SHT+ + E+   L 
Sbjct: 70  DGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAENPYGLY 129

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           ++G N+ GQLG G   N  +P+ +     +   A ACG+  ++ +S+     +   G   
Sbjct: 130 SWGCNRWGQLGLGDQINRNQPTRINHSDRATFVAIACGSQHSMIVSNF--GELYTFGCGT 187

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            G+LG G        D S +       +P  +++L G+ IV    G  H+  VDS G +Y
Sbjct: 188 TGRLGLG--------DESPRF------KPTVVSSLVGKQIVSCGAGVMHSSCVDSTGKIY 233

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           ++G+  YG+LG    K   +P ++   Q  + +    V+   +   +             
Sbjct: 234 SFGWNRYGQLGTGSVKSHTLPAKMKETQITSKMHFVKVVCGKNHTLA------------- 280

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
           L NNG+                                  +S+G    G+LG G +  + 
Sbjct: 281 LSNNGE---------------------------------MVSFGFNACGQLGVGSHLDQI 307

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           +  P K++  E   V+ +A GY HSL + D 
Sbjct: 308 N--PTKIEFSE--KVLDIATGYYHSLCVTDN 334



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 124/307 (40%), Gaps = 89/307 (28%)

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS---EVTATACGADFTVWLSSVEGAS 183
           EDG   ++G+N  GQ G+G  +  I PSPV+  +     +   ACG   T+ ++      
Sbjct: 69  EDGLVYSWGYNYFGQCGNGGNQTIIVPSPVQFSIDIKISIKTIACGDSHTLAIAE-NPYG 127

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           + + G  ++GQLG G     N              +P  I      T V +ACG+ H++ 
Sbjct: 128 LYSWGCNRWGQLGLGDQINRN--------------QPTRINHSDRATFVAIACGSQHSMI 173

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--AGSVNSSCTA 301
           V + G +YT+G G  GRLG  ++   + P  V      + L  + ++S  AG ++SSC  
Sbjct: 174 VSNFGELYTFGCGTTGRLGLGDESPRFKPTVV------SSLVGKQIVSCGAGVMHSSCVD 227

Query: 302 GGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
             G++Y +G                    WN                         +YG+
Sbjct: 228 STGKIYSFG--------------------WN-------------------------RYGQ 242

Query: 362 LGYGPYGQKSSAMP---KKVDILEGMHVISVACGYGHSLVIVD-------------RTNV 405
           LG G    KS  +P   K+  I   MH + V CG  H+L + +             +  V
Sbjct: 243 LGTGSV--KSHTLPAKMKETQITSKMHFVKVVCGKNHTLALSNNGEMVSFGFNACGQLGV 300

Query: 406 GERLDQV 412
           G  LDQ+
Sbjct: 301 GSHLDQI 307


>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
           caballus]
          Length = 531

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLIPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein, partial [Acanthamoeba castellanii
           str. Neff]
          Length = 872

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 163/400 (40%), Gaps = 62/400 (15%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G RK A   N + P R+  L     R VA  C   HC+AV V G+ Y WG   +   G  
Sbjct: 64  GERKAA---NALKPVRVEGLR--HERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSA 118

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
           +K        +S L+  ++K+   GRSH+                  Q   GS     +P
Sbjct: 119 NKEYFGMAIGLSGLNSDRMKRM-VGRSHSTYYAAGATGEELEELSRVQ-NFGSFTPYTQP 176

Query: 154 SP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
           SP V   +  V      A ++  L+      + + G  +  QLG G  + YN        
Sbjct: 177 SPEVVTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLG--HRYN-------- 226

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
               Q  P+ +  L G  IV   CG  H+V + + G+VYT+G G +G+LGH    DE  P
Sbjct: 227 ----QSVPQLVPHLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFP 282

Query: 273 RRVDVFQRNNVLPPE----------AVISAGSVNSSCTAGGGQLYMWGKLK-------NN 315
           RRV+      ++P E            I+ GS ++      G ++ WG  +       N 
Sbjct: 283 RRVEA-----LVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNA 337

Query: 316 GDDW--------------MYPKPLMD-LSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQY 359
            +DW                P+ L     G ++  +  G++H+   A D S  SWG   Y
Sbjct: 338 YEDWATGQRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWGWGSY 397

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G LG+G    +   +PK +  + G  ++  A G  HSL +
Sbjct: 398 GVLGHG--NHRFQLVPKLIRRIGGERIVQTAAGAKHSLAV 435



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 93/385 (24%), Positives = 160/385 (41%), Gaps = 74/385 (19%)

Query: 83  GRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           G  + G+LG G D  +   P ++      +I+    G  H++ V E G+   +G  K GQ
Sbjct: 1   GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKEGQ 60

Query: 142 LGSGSIR--NEIEPSPVRCLVSE-VTATACGADFTVWLS-------------SVEGASIL 185
           LG+G  +  N ++P  V  L  E V A  CG +  + ++              VEG++  
Sbjct: 61  LGNGERKAANALKPVRVEGLRHERVVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANK 120

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA-----------------------QPRPRA 222
                  G  G  +D        S    Y A                       QP P  
Sbjct: 121 EYFGMAIGLSGLNSDRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEV 180

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L    +V+VA G + ++AV S+G VY+WGF    +LG   + ++ VP+ V   Q  +
Sbjct: 181 VTGLQHVKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSVPQLVPHLQGVH 240

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNN-GDDWMYPKPLMDL-------- 328
           ++      + G  +S   +  G +Y     ++G+L +    D  +P+ +  L        
Sbjct: 241 IVS----ATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEGVE 296

Query: 329 -SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG---------YGPYGQKSSAM--- 374
            +G  +  +  G+ H   +G   +  +WG A+YG+ G          G   +KS+AM   
Sbjct: 297 SAGERIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICA 356

Query: 375 -PKKVD-ILEGMHVISVACGYGHSL 397
            P+ +    +G H+  V+CG+ H+L
Sbjct: 357 TPRSLSGCFDGKHIAHVSCGHLHNL 381



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 99/235 (42%), Gaps = 44/235 (18%)

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G  + G+LG G DN         K A E    P  +    G+ I  VACG  H++AV   
Sbjct: 1   GTGKVGELGAGRDN---------KEALE----PILLERFRGKRIRSVACGEQHSMAVGET 47

Query: 248 GYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GG 303
           G VY WG    G+LG+ E+K  +   P RV+  +       E V++     + C A   G
Sbjct: 48  GDVYVWGRAKEGQLGNGERKAANALKPVRVEGLRH------ERVVAGVCGYNHCLAVTVG 101

Query: 304 GQLYMWGKLKNNGD---DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
           G+LY WG L  + +   +  Y    + LSG N     S  M   VG   S      A   
Sbjct: 102 GKLYQWGMLHKHVEGSANKEYFGMAIGLSGLN-----SDRMKRMVGRSHSTYYAAGATGE 156

Query: 361 EL----------GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           EL           + PY Q S   P+ V  L+ + V+ VA GY  SL +  +  V
Sbjct: 157 ELEELSRVQNFGSFTPYTQPS---PEVVTGLQHVKVVEVAAGYSFSLAVTSQGEV 208



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 1/73 (1%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C   H +A   +G  Y+WG    G LGHG+   +  P ++  +   +I +  AG  H++ 
Sbjct: 375 CGHLHNLATARDGSVYSWGWGSYGVLGHGNHRFQLVPKLIRRIGGERIVQTAAGAKHSLA 434

Query: 125 VTEDGNSLAFGWN 137
           V   G+S  F ++
Sbjct: 435 VNA-GSSTLFAFD 446


>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
 gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Rattus norvegicus]
          Length = 531

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 127/274 (46%), Gaps = 31/274 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKRIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL   +V
Sbjct: 124 NLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VNIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL G  + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P ++       +
Sbjct: 228 AALHGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTQI-------M 280

Query: 284 LPPEAVISAGSVNSSCTAG----GGQLYMWGKLK 313
           +  E VI   + +S+ T+     GG +YMWG+ +
Sbjct: 281 VEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCR 314



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT+      FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQETGSIRKACVFGISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L  + + + + G+   V LS+ +G  +   G   Y QLG+GT N             +  
Sbjct: 71  LCGKRIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G ++ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHTKKVVNIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G  +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HGVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGSKNNLLSPTQIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSTHT 297



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 41/89 (46%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L GV +  +  G    H +A+  EG  Y WG N  GQLG G K     
Sbjct: 218 NGNQLTPVRVAALHGVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           PT +    +  I+ A    +HT      G
Sbjct: 276 PTQIMVEKERVIEIAACHSTHTSAAKTQG 304


>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
 gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
            KNP414]
          Length = 1224

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 94/306 (30%), Positives = 135/306 (44%), Gaps = 58/306 (18%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G  ++ +A G    H VA+  +G  +TWG N  GQLG      R  P  VS 
Sbjct: 732  PGKVINLTG--MKMIAGG--ENHTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVST 787

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
            L+ +      AG +H++ +  DG   AFG+N +GQLG G+  ++  P  V+ L   V A 
Sbjct: 788  LTNW--TAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTSSQRTPVQVKDLTG-VVAI 844

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA- 225
            A G DF++ L S    ++ + G   YG+LG+GT     T  SSV +        +AIAA 
Sbjct: 845  AAGKDFSLALKS--DGTVWSWGQNTYGELGNGT-----TTRSSVPVQVALLTDVKAIAAG 897

Query: 226  ------------------------------------LAGETIVK-VACGTNHTVAVDSKG 248
                                                 +G T +K +A G  HT+A+ S G
Sbjct: 898  DYHGVALKKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTGIKGIAAGPYHTLALKSDG 957

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             V++WG+ GYG+LG        VP  +        L   A I+AG   S      G LY 
Sbjct: 958  TVWSWGYNGYGQLGSGNNTSRSVPAAIP------GLASMASIAAGENQSIAYGNDGILYS 1011

Query: 309  WGKLKN 314
            WG+  N
Sbjct: 1012 WGRNAN 1017



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 148/343 (43%), Gaps = 39/343 (11%)

Query: 61   VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
            +A   +  H + +  +G  + WG N  GQLG G       P  V  L+  K+     G +
Sbjct: 692  LAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGTSNSTSVPGKVINLTGMKM--IAGGEN 749

Query: 121  HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVE 180
            HTV +  DG    +G+N +GQLG  S      P  V  L +  TA + G + ++ L S  
Sbjct: 750  HTVALRSDGTLHTWGYNGYGQLGDDSTTTRYSPVQVSTL-TNWTAVSAGENHSLALKS-- 806

Query: 181  GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              ++   G   YGQLG GT                +Q  P  +  L G  +V +A G + 
Sbjct: 807  DGTVWAFGYNGYGQLGDGTT--------------SSQRTPVQVKDLTG--VVAIAAGKDF 850

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            ++A+ S G V++WG   YG LG+       VP +V       +L     I+AG  +    
Sbjct: 851  SLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA------LLTDVKAIAAGDYHGVAL 904

Query: 301  AGGGQLYMWGKLKN----NGDDWMYPKPLMD-LSGWNLRCMDSGNMHHF-VGADSSCISW 354
               G ++ WG   N    N        P+   ++G  ++ + +G  H   + +D +  SW
Sbjct: 905  KKDGSVFAWGYNGNGELGNSSTISQSTPVQSGVTG--IKGIAAGPYHTLALKSDGTVWSW 962

Query: 355  GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G+  YG+LG G     S ++P  +  L  M   S+A G   S+
Sbjct: 963  GYNGYGQLGSG--NNTSRSVPAAIPGLASM--ASIAAGENQSI 1001



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 26/230 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P +++ L GV    VA        +A+  +G  ++WG+N  G+LG+G   +   P  V+
Sbjct: 831  TPVQVKDLTGV----VAIAAGKDFSLALKSDGTVWSWGQNTYGELGNGTTTRSSVPVQVA 886

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             L+   +K   AG  H V + +DG+  A+G+N +G+LG+ S  ++   +PV+  V+ +  
Sbjct: 887  LLTD--VKAIAAGDYHGVALKKDGSVFAWGYNGNGELGNSSTISQ--STPVQSGVTGIKG 942

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
             A G   T+ L S    ++ + G   YGQLG G     N    SV         P AI  
Sbjct: 943  IAAGPYHTLALKS--DGTVWSWGYNGYGQLGSG-----NNTSRSV---------PAAIPG 986

Query: 226  LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            LA  ++  +A G N ++A  + G +Y+WG    G+LG+    D  VP +V
Sbjct: 987  LA--SMASIAAGENQSIAYGNDGILYSWGRNANGQLGNGTTVDTNVPHKV 1034



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 19/201 (9%)

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
           KD++   +  + P     +A  G   + V+   NHT+ + S G V+ WG+ G+G+LG   
Sbjct: 666 KDTAGNESAASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWGYNGHGQLGTGT 725

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWM 320
                VP +V        L    +I+ G  ++      G L+ W     G+L ++     
Sbjct: 726 SNSTSVPGKVI------NLTGMKMIAGGENHTVALRSDGTLHTWGYNGYGQLGDDSTTTR 779

Query: 321 Y-PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           Y P  +  L+ W    + +G  H   + +D +  ++G+  YG+LG G     S   P +V
Sbjct: 780 YSPVQVSTLTNWT--AVSAGENHSLALKSDGTVWAFGYNGYGQLGDGT--TSSQRTPVQV 835

Query: 379 DILEGMHVISVACGYGHSLVI 399
             L G  V+++A G   SL +
Sbjct: 836 KDLTG--VVAIAAGKDFSLAL 854


>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
           africana]
          Length = 531

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGSAP-HVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL + +V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  V V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHVLV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+     G +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQSGNVYMWGQCR 314



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/235 (28%), Positives = 101/235 (42%), Gaps = 24/235 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS-HTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  L   KIK    G + H ++ TEDG   A+G N 
Sbjct: 44  FVFGMNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSAPHVLLSTEDGVVYAWGHNG 103

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+    + P  V    L+ +V   ACG+  ++ L++     +   G    GQ+G
Sbjct: 104 YSQLGNGTTNQGVAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            G+                 QP PR +   L  + +V +ACG   ++AV   G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            G G+LG     ++  P RV       V      I  G  ++      G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSGNEALYVTDNDEVFVFGMNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSAPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GV 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHVLVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 3/96 (3%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVV-TEDGNSLAFG 135
           P  V    +  ++ A    +HT    T+ GN   +G
Sbjct: 276 PAHVLVEKERVVEIAACHSAHTSAAKTQSGNVYMWG 311


>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
          Length = 531

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 126/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL + +V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPVHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGNSANEALYVTDNDEVFVFGMNYSNCLGTGDSQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKKVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLNPVHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PVHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
          Length = 560

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 133/291 (45%), Gaps = 30/291 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+   G+ +TWG  + G+LGHGD   +  P ++  L+   I  A  G  H+  V + 
Sbjct: 225 HSMAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+   +G   +G+LG G       P  V   + E +   CG + TV LS+ +G ++ + G
Sbjct: 285 GHLYMWGEGDYGRLGLGDALQRSVPVQVPD-IREASQVVCGFNHTVVLST-DGRTVWSFG 342

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + G+LGHG  N               Q RP+ I AL G TI ++A GT  + AV  +G
Sbjct: 343 AAENGKLGHGDTNR--------------QFRPKIIDALQGLTITQIAAGTQISAAVTREG 388

Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            +Y WGFG    LG+    + + +P+ V       V+     I+ G  +       G ++
Sbjct: 389 ALYVWGFGPC--LGNGSSDETFMLPKVVRGLSGRVVID----IAIGENHVVALTKDGLVF 442

Query: 308 MWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
            WG  +N           +  P+ +  L G  ++ + +G  H FV + + C
Sbjct: 443 TWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFVWSAAPC 493



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 150/387 (38%), Gaps = 99/387 (25%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           + WG N   QL   D    D+      LS Y K+    AG+  T  V  +G  +A G   
Sbjct: 132 FCWGSNSSQQLT--DATPEDKLLYPRNLSVYGKVMSITAGQYCTFAVLSNGTVMANGKGS 189

Query: 139 HGQLGSGSIRNE-----IE-PSPVRCLV----SEVTATACGADFTVWLSSVEGASILNAG 188
           +G+LG+G+  +      IE P+PVR ++    S+  + A G +  +W            G
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSMAIGKNGQIW----------TWG 239

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              YG+LGHG        DS+       Q  P+ I ALA   IV   CG  H+ AV   G
Sbjct: 240 DGDYGKLGHG--------DSTT------QKSPKLIEALASRVIVDADCGHRHSAAVCDAG 285

Query: 249 YVYTWGFGGYGR------------------------------------------------ 260
           ++Y WG G YGR                                                
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAE 345

Query: 261 ---LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---LKN 314
              LGH +   ++ P+ +D  Q   +      I+AG+  S+     G LY+WG    L N
Sbjct: 346 NGKLGHGDTNRQFRPKIIDALQGLTITQ----IAAGTQISAAVTREGALYVWGFGPCLGN 401

Query: 315 NGDD--WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
              D  +M PK +  LSG  +  +  G  H   +  D    +WG+ Q G+ G G  G  +
Sbjct: 402 GSSDETFMLPKVVRGLSGRVVIDIAIGENHVVALTKDGLVFTWGNNQNGQCGTGS-GMAT 460

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLV 398
              P+ V  L G  +  V  G  H+ V
Sbjct: 461 YTSPQMVQGLHGAGIQQVTAGTTHTFV 487



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            V A C   H  AV   G  Y WG  + G+LG GD +QR  P  V ++   +  +   G 
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGF 325

Query: 120 SHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
           +HTVV++ DG ++ +FG  ++G+LG G    +  P  +  L    +T  A G   +  ++
Sbjct: 326 NHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVT 385

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             EGA  +    P    LG+G+ +E                 P+ +  L+G  ++ +A G
Sbjct: 386 R-EGALYVWGFGP---CLGNGSSDETFM-------------LPKVVRGLSGRVVIDIAIG 428

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG 262
            NH VA+   G V+TWG    G+ G
Sbjct: 429 ENHVVALTKDGLVFTWGNNQNGQCG 453



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 119/289 (41%), Gaps = 38/289 (13%)

Query: 130 NSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           N++    N   Q  + S +   IE   +  + ++   TA  +  T+ LSS+  AS  + G
Sbjct: 62  NTIQANANSSNQQSAKSEVIRAIEAQILNMVATKPKVTADQSALTI-LSSIAAASCNDGG 120

Query: 189 L---PQYGQ----LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
               P +       G  +  +        KL Y     PR ++      ++ +  G   T
Sbjct: 121 TNGGPSFADEVFCWGSNSSQQLTDATPEDKLLY-----PRNLSVYG--KVMSITAGQYCT 173

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI-SAGSVNSSCT 300
            AV S G V   G G YGRLG+        P  ++        P   ++ S GS   S  
Sbjct: 174 FAVLSNGTVMANGKGSYGRLGNGASASSSSPILIEF-----PAPVRKILTSKGSDGHSMA 228

Query: 301 AG-GGQLYMW-----GKLKNNGDDWMY--PKPLMDLSGWNLRCMDSGNMHHFVGADSSCI 352
            G  GQ++ W     GKL  +GD      PK +  L+   +   D G+ H     D+  +
Sbjct: 229 IGKNGQIWTWGDGDYGKL-GHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDAGHL 287

Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVI 399
             WG   YG LG G   Q+S  +P +V DI E   V+   CG+ H++V+
Sbjct: 288 YMWGEGDYGRLGLGDALQRS--VPVQVPDIREASQVV---CGFNHTVVL 331


>gi|145509481|ref|XP_001440679.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124407907|emb|CAK73282.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 159/384 (41%), Gaps = 52/384 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN +S    + +   D+ FVA  C S    A+D  G+ YTWGR++ G LG+G     + P
Sbjct: 46  GNSISQYSPQLVPIQDVLFVA--CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINVP 103

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--- 158
           ++V  L     K    G  H   +T DG    +G   HG+LG     +   PS  +    
Sbjct: 104 SLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGNFDHGKLGHSFDNSAKLPSREKYEYQ 163

Query: 159 -------------LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
                        L  +V   A G  FT+ LS  E  ++ + GL + G LG+ T N    
Sbjct: 164 KNLGSAKLPELVQLNFKVQQVALGDQFTIILS--EDGNVYSVGLNKKGILGYQTKN---- 217

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                      +P  + I  L  + IV++  GT+ +VA+DS G ++ WG   +G+LG   
Sbjct: 218 ---------VDEPTFKQIPDL--KNIVQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTPS 266

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM----- 320
                 P  V   Q+   LP     S G       +  G LY WG     GD  +     
Sbjct: 267 ------PSVVQTPQQIKGLPKIKQFSCGEQFIGALSTDGVLYTWGF---GGDGQLGTPSK 317

Query: 321 --YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
              P P       N+  +  G  H  + + +     G  + G+LG G   +  ++  +  
Sbjct: 318 QDIPTPHKIQFDQNIDKVSCGQAHVGIVSKNKLYMHGRGKEGQLGRGSETESPNS-SRYS 376

Query: 379 DILEGMHVISVACGYGHSLVIVDR 402
            +L   +VI +ACG  HS  +V++
Sbjct: 377 PLLVMENVIKIACGGSHSFAVVNQ 400



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 31/184 (16%)

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           V S+  +Y WG+  +G+LG      ++ P+ V +    +VL     ++  S  S+     
Sbjct: 26  VFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QDVL----FVACKSSVSAAIDKS 78

Query: 304 GQLYMWGK----LKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGH 356
           G+LY WG+    L  NG  ++   P  +  L   + + +  GN H   +  D    +WG+
Sbjct: 79  GKLYTWGRSKFGLLGNGQVENINVPSLVQCLKHLDFKFVACGNYHMAAITTDGQLYTWGN 138

Query: 357 AQYGELGYG-------PYGQK--------SSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             +G+LG+        P  +K        S+ +P+ V +     V  VA G   ++++ +
Sbjct: 139 FDHGKLGHSFDNSAKLPSREKYEYQKNLGSAKLPELVQL--NFKVQQVALGDQFTIILSE 196

Query: 402 RTNV 405
             NV
Sbjct: 197 DGNV 200


>gi|46250190|gb|AAH68656.1| MGC81035 protein [Xenopus laevis]
          Length = 530

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 22/268 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I+ ++ G    H +  + +G  Y+WG N   QLG+G+ IQ   P  +
Sbjct: 63  IMPRRLDVLCGKKIKDLSYGS-GPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 121

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
             EL   K+ K   G  H++ +T DG   ++G+N  GQ+GSG+  N+  P  V   +   
Sbjct: 122 CMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSK 181

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +  A  T  ++  +   +   G    GQLG G     NT +         Q  P  +
Sbjct: 182 VVVSIAAGQTSSMAITDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  I++V  G  H++A+  +G +Y WG   +G+LG   + ++ VP +V   +R   
Sbjct: 228 VFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 284

Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
                V +  S N S+  +  GQ+YMWG
Sbjct: 285 --MVEVAACHSTNISAAKSQSGQVYMWG 310



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  L   KIK    G   H ++  EDG   ++G N 
Sbjct: 44  FVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYSWGHNG 103

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+      P  V    L  +V   ACG+  ++ L+S     + + G    GQ+G
Sbjct: 104 YSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTS--DGEVFSWGYNNSGQVG 161

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            GT     T + SV         PR + ++L  + +V +A G   ++A+   G+VY WG+
Sbjct: 162 SGT-----TANQSV---------PRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGY 207

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--GSVNSSCTAGGGQLYMWG 310
            G G+LG     ++ +P R+ VF +     P  +I    G  +S   +  G LY WG
Sbjct: 208 NGTGQLGLGNTGNQLMPCRL-VFAQ-----PVCIIQVVLGYAHSLALSDQGVLYAWG 258



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  T++     FG N    LG+G  ++ I P  +  L   ++   + G+   +
Sbjct: 28  GSSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHI 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L + +G  + + G   Y QLG+G   +  T    V++  E          L  + ++KV
Sbjct: 88  LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIKV 133

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++A+ S G V++WG+   G++G     ++ VPR+V    ++ V+     I+AG 
Sbjct: 134 ACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVV---VSIAAGQ 190

Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            +S      G +Y WG        L N G+  M P  L+      +  +  G  H    +
Sbjct: 191 TSSMAITDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPVCIIQVVLGYAHSLALS 249

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           D   + +WG   +G+LG G   + +  +P KV   E M
Sbjct: 250 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 285


>gi|6522549|emb|CAB61992.1| putative protein [Arabidopsis thaliana]
          Length = 951

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 41/368 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+  V +D + ++ G  + + V V  +G+ Y+WG    G+LGHG       P ++ E
Sbjct: 287 PKVLKSHVALDAQSISCG--TNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 344

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSE-- 162
            +   ++ A  G  HT  VT  G+  A+G   H  G LG GS  +  +  PVR L     
Sbjct: 345 FNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEG 402

Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V A +CG   T +++S EG  +   G   +G LGHG     N               P
Sbjct: 403 IYVKAISCGPWHTAFVTS-EG-KLFTFGDGTFGALGHGDRISTNI--------------P 446

Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
           R + AL G   +K ACG  H+ AV        S G ++TWG G  GRLGH + +   +P 
Sbjct: 447 REVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 506

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
            V      +       ++ G   +   +  GQ+Y  G    + D    P  +    G + 
Sbjct: 507 CVTELDTTSF----QQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSF 562

Query: 334 RCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
               +   HH   + + +   +WG    G+LG+G    +   MP  V  L+G  V  V C
Sbjct: 563 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYR--CMPTLVKALKGKQVRKVVC 620

Query: 392 GYGHSLVI 399
           G  ++  I
Sbjct: 621 GSNYTATI 628



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +        ++CGTN+ V V  +G +Y+WG    GRLGH        P+ +D F 
Sbjct: 287 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFN 346

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            + V     +   G  ++      G LY WG   +N            W   + L  + G
Sbjct: 347 GSTV----ELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEG 402

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  FV ++    ++G   +G LG+G   + S+ +P++V+ L G   I  
Sbjct: 403 IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIKA 460

Query: 390 ACGYGHSLVIV 400
           ACG  HS  +V
Sbjct: 461 ACGVWHSAAVV 471


>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 708

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 110/368 (29%), Positives = 162/368 (44%), Gaps = 40/368 (10%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G+ D N   P R+R L GV    VA      H +AV  +G  + WG N  GQLG G    
Sbjct: 95  GSFD-NRAEPVRVRGLSGV----VAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDN 149

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V   S      AG   +H++ V  DG   A+G N +GQLG+    N  EP  V 
Sbjct: 150 RAEPVRVRGSSGVVAVAAGG--AHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVL 207

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            +   VT +A GA+ ++ +S+    ++   G   +GQLG             +       
Sbjct: 208 RVTGGVTVSA-GANHSLAVSA--DGTVWAWGDNSHGQLG-------------IARTTPLL 251

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  +  + G   V +A G NH++AV   G V+ WG  G+G+LG+    D   P RV  
Sbjct: 252 SIPGRVPEVRGS--VAMAAGDNHSLAVRDDGTVWAWGSNGHGQLGNGFMVDNSEPGRVPG 309

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNL 333
            +          ++AGS +S      G ++ WG      + +G       P        +
Sbjct: 310 LE------GVGAVAAGSNHSLAVRDDGTVWAWGSNVEGQRGDGTTGQLSAPTRVPGVSGV 363

Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             + +   H   V AD S  +WGH  +GELG G    ++S  P +VD L+   V++VA G
Sbjct: 364 VGVAANVFHSLAVSADGSAWAWGHNSHGELGDGS--TRNSPAPVRVDGLK--EVVAVAAG 419

Query: 393 YGHSLVIV 400
             HSL ++
Sbjct: 420 SSHSLALL 427



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 152/352 (43%), Gaps = 53/352 (15%)

Query: 68  CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
            H ++V  +G  +  G N  GQLG G    R  P  V  LS      AG G  H++ V  
Sbjct: 20  SHSLSVHQDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLSGVVTVAAGGG--HSLAVHS 77

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------ADFTVWLSSV 179
           DG   A+G N  GQLG GS  N  EP  VR L S V A A G        AD TVW    
Sbjct: 78  DGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGL-SGVVAVAAGGYHSLAVSADGTVWA--- 133

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
                   G    GQLG   D  ++ +   V++                  +V VA G  
Sbjct: 134 -------WGNNSSGQLG---DGSFDNRAEPVRVRGS-------------SGVVAVAAGGA 170

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H++AV S G ++ WG   YG+LG+R + +   P  V V +    +     +SAG+ +S  
Sbjct: 171 HSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEP--VQVLR----VTGGVTVSAGANHSLA 224

Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW--NLR---CMDSGNMHHF-VGADSSCIS 353
            +  G ++ WG   +         PL+ + G    +R    M +G+ H   V  D +  +
Sbjct: 225 VSADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAMAAGDNHSLAVRDDGTVWA 284

Query: 354 WGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           WG   +G+LG G     S   P +V  LEG  V +VA G  HSL + D   V
Sbjct: 285 WGSNGHGQLGNGFMVDNSE--PGRVPGLEG--VGAVAAGSNHSLAVRDDGTV 332



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 103/229 (44%), Gaps = 25/229 (10%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G+R     G L +PTR+          V       H +AV  +G  + WG N  G+LG G
Sbjct: 341 GQRGDGTTGQLSAPTRVP----GVSGVVGVAANVFHSLAVSADGSAWAWGHNSHGELGDG 396

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
               R+ P  V      ++    AG SH++ +  DG  LA+G N  GQLG G+  +   P
Sbjct: 397 ST--RNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTFGQLGDGTRASHSVP 454

Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
           + VR L   V A A G+  +  L+ +   ++   G    GQLG GT              
Sbjct: 455 AQVRGL-RGVVAVAAGSSHS--LALLADGTVWTWGYNLNGQLGDGT----------TTYR 501

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
           YE    P A+  L  E +V VA G NH++AV S G  + WG    G+LG
Sbjct: 502 YE----PVAVKGL--EGVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLG 544



 Score = 62.4 bits (150), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 37/295 (12%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
           G SH++ V +DG   A G N  GQLG G+    +   PVR L +S V   A G   +  L
Sbjct: 18  GGSHSLSVHQDGTVWAVGGNSVGQLGDGTT--SLRRVPVRVLGLSGVVTVAAGGGHS--L 73

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +     ++   G    GQLG G+              ++ +  P  +  L+G  +V VA 
Sbjct: 74  AVHSDGTVWAWGNNSSGQLGDGS--------------FDNRAEPVRVRGLSG--VVAVAA 117

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G  H++AV + G V+ WG    G+LG     +   P RV              ++AG  +
Sbjct: 118 GGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGSSG------VVAVAAGGAH 171

Query: 297 SSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
           S      G L+ W     G+L N G+ +   P  ++ ++G  +      N    V AD +
Sbjct: 172 SLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLRVTG-GVTVSAGANHSLAVSADGT 230

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +WG   +G+LG        S +P +V  + G   +++A G  HSL + D   V
Sbjct: 231 VWAWGDNSHGQLGIARTTPLLS-IPGRVPEVRGS--VAMAAGDNHSLAVRDDGTV 282



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 97/218 (44%), Gaps = 29/218 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  ++ L GV    VA      H +AV  +G  + WG N +GQLG G    R  P  V  
Sbjct: 504 PVAVKGLEGV----VAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVEVKA 559

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTA 165
            +K      G     ++ V  DG   A+G N  GQLG GS  +   P P+R     EV A
Sbjct: 560 AAKAVAAAQGL----SLAVGSDGFPWAWGNNSSGQLGDGSTTSR--PMPMRVQGAGEVVA 613

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G   ++ LS   G  +   G    GQLG GT +         +LA      P  +  
Sbjct: 614 VAAGNGHSLALSPEGG--VWAWGQNARGQLGEGTLDR--------RLA------PTRVQG 657

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
           L+   +V VA G   ++AV   G V++WG   +G+LG+
Sbjct: 658 LS--GVVAVAAGGAFSLAVRDDGSVWSWGDNAFGQLGN 693


>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
          Length = 371

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 101/226 (44%), Gaps = 26/226 (11%)

Query: 65  CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           CVS    H  A+   G  + WGR   GQLG G       P  +S      +K    G SH
Sbjct: 83  CVSAGHRHAAAIVGGGDVFVWGRGFSGQLGLGTNKSHFTPQPLS--FPMPVKALSCGGSH 140

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLS 177
           ++ +TEDG   A G  K GQLG+GS   E   SPV   + E    V A  CG DF+V   
Sbjct: 141 SLFITEDGRLYATGRGKEGQLGTGS--QESVLSPVEVQMPEGSGRVKAAECGKDFSVI-- 196

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           + E   +   G   YGQLG G    Y                P+ +A LAG+ +  +A G
Sbjct: 197 ATESGQVFTFGSDDYGQLGLGQFARYAMT-------------PKEVAVLAGKNVRSIAAG 243

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             H  AV S G +YTWG+G  G+LG+    D  +P  V   Q   V
Sbjct: 244 DYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRV 289



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 79/327 (24%), Positives = 128/327 (39%), Gaps = 78/327 (23%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           R Y WG      LG G+ +    P    +++   +    AG  H   +   G+   +G  
Sbjct: 55  RMYCWG-----LLGLGETLDVLYP---QKVNLEGVTCVSAGHRHAAAIVGGGDVFVWGRG 106

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
             GQLG G+ ++   P P+      V A +CG   +++++  E   +   G  + GQLG 
Sbjct: 107 FSGQLGLGTNKSHFTPQPL-SFPMPVKALSCGGSHSLFIT--EDGRLYATGRGKEGQLGT 163

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA-CGTNHTVAVDSKGYVYTWGFG 256
           G+               E+   P  +    G   VK A CG + +V     G V+T+G  
Sbjct: 164 GSQ--------------ESVLSPVEVQMPEGSGRVKAAECGKDFSVIATESGQVFTFGSD 209

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
            YG+LG                                         GQ   +       
Sbjct: 210 DYGQLGL----------------------------------------GQFARYA------ 223

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
              M PK +  L+G N+R + +G+ H   V +D    +WG+ + G+LG G       ++P
Sbjct: 224 ---MTPKEVAVLAGKNVRSIAAGDYHAAAVTSDGKLYTWGYGRSGQLGNG--NTVDVSLP 278

Query: 376 KKVDILEGMHVISVACGYGHSLVIVDR 402
             V  L+ + V SVACG  H++ ++DR
Sbjct: 279 VLVRELQNLRVQSVACGCDHTVAVIDR 305



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 20/146 (13%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  +  L G ++R +AAG    H  AV  +G+ YTWG    GQLG+G+ +    P +V
Sbjct: 224 MTPKEVAVLAGKNVRSIAAG--DYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLV 281

Query: 105 SELSKYKIKKAGAGRSHTVVVT----------------EDGNSLAFGWNKHGQLGSGSIR 148
            EL   +++    G  HTV V                 E G     G  + GQLG G I 
Sbjct: 282 RELQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIV 341

Query: 149 NEIEPSPVRCLVSEVTATACGADFTV 174
               P+  R +  +V   ACG   T+
Sbjct: 342 E--SPAVYRSVPLQVQQVACGTSHTL 365



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 17/189 (8%)

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRS 120
           A  C   H + +  +GR Y  GR + GQLG G +     P  V       ++K A  G+ 
Sbjct: 133 ALSCGGSHSLFITEDGRLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAECGKD 192

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
            +V+ TE G    FG + +GQLG G   R  + P  V  L  +   +    D+     + 
Sbjct: 193 FSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAAGDYHAAAVTS 252

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           +G  +   G  + GQLG+G     NT D S+         P  +  L    +  VACG +
Sbjct: 253 DG-KLYTWGYGRSGQLGNG-----NTVDVSL---------PVLVRELQNLRVQSVACGCD 297

Query: 240 HTVAVDSKG 248
           HTVAV  +G
Sbjct: 298 HTVAVIDRG 306



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 87/201 (43%), Gaps = 33/201 (16%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGA 117
           R  AA C     V     G+ +T+G ++ GQLG G   +    P  V+ L+   ++   A
Sbjct: 183 RVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGKNVRSIAA 242

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV-- 174
           G  H   VT DG    +G+ + GQLG+G+  +   P  VR L +  V + ACG D TV  
Sbjct: 243 GDYHAAAVTSDGKLYTWGYGRSGQLGNGNTVDVSLPVLVRELQNLRVQSVACGCDHTVAV 302

Query: 175 ----------WLSS--VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
                      +SS  +E   +   G  + GQLG G   E      SV L  +       
Sbjct: 303 IDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVESPAVYRSVPLQVQ------- 355

Query: 223 IAALAGETIVKVACGTNHTVA 243
                     +VACGT+HT+A
Sbjct: 356 ----------QVACGTSHTLA 366


>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
          Length = 516

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 30/285 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+   G+ +TWG  + G+LGHGD   +  P ++  L+   I  A  G  H+  V + 
Sbjct: 225 HSIAIGKNGQIWTWGDGDYGKLGHGDSTTQKSPKLIEALASRVIVDADCGHRHSAAVCDA 284

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+   +G   +G+LG G       P  V   + E +   CG + TV LS+ +G ++ + G
Sbjct: 285 GHLYMWGEGDYGRLGLGDALQRSVPVQVPD-IREASQVVCGFNHTVVLST-DGRTVWSFG 342

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + G+LGHG  N               Q RP+ I AL G TI ++A GT  + AV  +G
Sbjct: 343 AAENGKLGHGDTNR--------------QFRPKIIDALQGLTITQIAAGTQISAAVTREG 388

Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            +Y WGFG    LG+    + + +P+ V       V+     I+ G  +       G ++
Sbjct: 389 ALYVWGFGPC--LGNGSSDETFMLPKVVRGLSGRVVID----IAVGENHVVALTKDGLVF 442

Query: 308 MWGKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
            WG  +N           +  P+ +  L G  ++ + +G  H FV
Sbjct: 443 TWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 156/393 (39%), Gaps = 91/393 (23%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           + WG N   QL   D    D+      LS Y K+    AG+  T  V  +G  +A G   
Sbjct: 132 FCWGSNSSQQLT--DATPEDKLLYPRNLSVYGKVMSMTAGQYCTFAVLSNGTVMANGKGS 189

Query: 139 HGQLGSGSIRNE-----IE-PSPVRCLV----SEVTATACGADFTVWLSSVEGASILNAG 188
           +G+LG+G+  +      IE P+PVR ++    S+  + A G +  +W            G
Sbjct: 190 YGRLGNGASASSSSPILIEFPAPVRKILTSKGSDGHSIAIGKNGQIW----------TWG 239

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
              YG+LGHG        DS+       Q  P+ I ALA   IV   CG  H+ AV   G
Sbjct: 240 DGDYGKLGHG--------DSTT------QKSPKLIEALASRVIVDADCGHRHSAAVCDAG 285

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNV------------------------ 283
           ++Y WG G YGRLG  +     VP +V D+ + + V                        
Sbjct: 286 HLYMWGEGDYGRLGLGDALQRSVPVQVPDIREASQVVCGFNHTVVLSTDGRTVWSFGAAE 345

Query: 284 ------------LPPEAV----------ISAGSVNSSCTAGGGQLYMWGK---LKNNGDD 318
                         P+ +          I+AG+  S+     G LY+WG    L N   D
Sbjct: 346 NGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVTREGALYVWGFGPCLGNGSSD 405

Query: 319 --WMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
             +M PK +  LSG  +  +  G  H   +  D    +WG+ Q G+ G G  G  +   P
Sbjct: 406 ETFMLPKVVRGLSGRVVIDIAVGENHVVALTKDGLVFTWGNNQNGQCGTGS-GMATYTSP 464

Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
           + V  L G  +  V  G  H+ V   R    E+
Sbjct: 465 QMVQGLHGAGIQQVTAGTTHTFVCFWRNTSREK 497



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 21/205 (10%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            V A C   H  AV   G  Y WG  + G+LG GD +QR  P  V ++   +  +   G 
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYMWGEGDYGRLGLGDALQRSVPVQVPDIR--EASQVVCGF 325

Query: 120 SHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLS 177
           +HTVV++ DG ++ +FG  ++G+LG G    +  P  +  L    +T  A G   +  ++
Sbjct: 326 NHTVVLSTDGRTVWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIAAGTQISAAVT 385

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             EGA  +    P    LG+G+ +E                 P+ +  L+G  ++ +A G
Sbjct: 386 R-EGALYVWGFGP---CLGNGSSDETFM-------------LPKVVRGLSGRVVIDIAVG 428

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLG 262
            NH VA+   G V+TWG    G+ G
Sbjct: 429 ENHVVALTKDGLVFTWGNNQNGQCG 453


>gi|309792077|ref|ZP_07686551.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG-6]
 gi|308225884|gb|EFO79638.1| regulator of chromosome condensation RCC1 [Oscillochloris
           trichoides DG6]
          Length = 778

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 152/365 (41%), Gaps = 38/365 (10%)

Query: 26  GSTCWDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
           G TCW       G L DG  +  +    + G+    VA      H  A+  EG    WG 
Sbjct: 433 GVTCWG--NNESGQLGDGTTIQRSTPVQVEGLSSGVVAITAGDSHTCALSTEGGVTCWGG 490

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
           N  GQLG+G   QR  P  V  LS   +    AG SHT  +T  G    +G N +GQLG 
Sbjct: 491 NGSGQLGNGTTTQRSTPVQVEGLSS-GVMAITAGDSHTCALTTGGGVTCWGGNWYGQLGD 549

Query: 145 GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           G+      P  V  L S V A A G   T  LS+  G +    G   Y QLG GT   +N
Sbjct: 550 GTTTQRNMPVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCW--GWNTYDQLGDGTRTNHN 607

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
           T              P  +  L+   +  +A G  HT A+ + G V  WG+  YG+LG  
Sbjct: 608 T--------------PVQVEGLS-SGVAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDG 652

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYP 322
                  P  V     N +    A I AG  ++   + GG +  WG  K    G+  +  
Sbjct: 653 TTTQRMTPVVV-----NGLSSEVAAIVAGYAHTCALSTGGGVTCWGWNKYYQLGNGTISQ 707

Query: 323 KPL-MDLSGWN--LRCMDSGNMHHF---VGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
           + + MD+ G +  +  + +G+ H      G   +C  WG   YG+LG G    +++  P 
Sbjct: 708 RSIPMDVDGLSSGVAALAAGDAHTCGLSTGGGVTC--WGWDVYGQLGVGTIAYRTT--PV 763

Query: 377 KVDIL 381
            V +L
Sbjct: 764 DVTVL 768



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 110/370 (29%), Positives = 158/370 (42%), Gaps = 48/370 (12%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           L+ N+ S     P+   D           +  A+        WG NE GQLG G  IQR+
Sbjct: 48  LEANIASAQHRTPIAAGDA----------YTCALTTNSAVICWGNNEFGQLGDGTTIQRN 97

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            P  V+ LS   +  A AG +HT  +T  G    +G N+ GQLG+G       P  V  L
Sbjct: 98  TPVAVNGLSSGVVAIA-AGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRTPVQVAGL 156

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S V A A G   T  L++ +GA +   G   YGQLG GT  + +T              
Sbjct: 157 SSGVAAIAAGEYHTCALTT-DGA-VTCWGSNGYGQLGDGTTTQRST-------------- 200

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  +A L+   +  +  G +HT A+ + G V  WG  G G+LG         P  V+V  
Sbjct: 201 PVQVAGLS-SGVTAITAGGSHTCALTTGGAVTCWGRNGNGQLGDGTTTQRSTP--VNVLG 257

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLSGWNL 333
            ++ +   A I+AG V +     GG +  WG            D+   P  ++ LS   +
Sbjct: 258 LSSEV---AAITAGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLSS-GV 313

Query: 334 RCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
             + +GN H      G   SC  WG  QY +LG G   Q+S+  P  V+ L      ++A
Sbjct: 314 TAIAAGNDHTCAITTGGGVSC--WGVNQYSQLGDGTTTQQST--PVVVNGLS-SRAAAIA 368

Query: 391 CGYGHSLVIV 400
            G GH+  + 
Sbjct: 369 AGDGHTCAMT 378



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 162/384 (42%), Gaps = 47/384 (12%)

Query: 26  GSTCWDAVGRRKGALDGNLVSPTRLRPL----VGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G +CW   GR      G+  +  R  P+    +   +  + AG    H  A+  EG    
Sbjct: 382 GVSCW---GRNWSGQLGDGTTTQRRTPMQVEGLSSGVADITAG--DSHTCALSTEGGVTC 436

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG NE GQLG G  IQR  P  V  LS   +    AG SHT  ++ +G    +G N  GQ
Sbjct: 437 WGNNESGQLGDGTTIQRSTPVQVEGLSSGVVAIT-AGDSHTCALSTEGGVTCWGGNGSGQ 495

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LG+G+      P  V  L S V A   G   T  L++  G  +   G   YGQLG GT  
Sbjct: 496 LGNGTTTQRSTPVQVEGLSSGVMAITAGDSHTCALTT--GGGVTCWGGNWYGQLGDGTTT 553

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
           + N   + V L+                 +  +A G +HT A+ ++G V  WG+  Y +L
Sbjct: 554 QRNMPVNVVGLS---------------SGVAAIAAGGSHTCALSTEGGVTCWGWNTYDQL 598

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-N 315
           G   + +   P +V+           A I+AG  ++      G++  W     G+L +  
Sbjct: 599 GDGTRTNHNTPVQVEGLSSG-----VAAIAAGYAHTCALITSGEVTCWGWNWYGQLGDGT 653

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHHF---VGADSSCISWGHAQYGELGYGPYGQKSS 372
               M P  +  LS   +  + +G  H      G   +C  WG  +Y +LG G   Q+S 
Sbjct: 654 TTQRMTPVVVNGLSS-EVAAIVAGYAHTCALSTGGGVTC--WGWNKYYQLGNGTISQRS- 709

Query: 373 AMPKKVDILEGMHVISVACGYGHS 396
            +P  VD L    V ++A G  H+
Sbjct: 710 -IPMDVDGLS-SGVAALAAGDAHT 731



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 160/403 (39%), Gaps = 57/403 (14%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           DG  +       + G+    VA      H  A+   G    WG NE GQLG+G  IQR  
Sbjct: 90  DGTTIQRNTPVAVNGLSSGVVAIAAGYAHTCALTTSGGVSCWGNNESGQLGNGITIQRRT 149

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P  V+ LS   +    AG  HT  +T DG    +G N +GQLG G+      P  V  L 
Sbjct: 150 PVQVAGLSS-GVAAIAAGEYHTCALTTDGAVTCWGSNGYGQLGDGTTTQRSTPVQVAGLS 208

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA---- 216
           S VTA   G   T  L++  G ++   G    GQLG GT  + +T  + + L+ E     
Sbjct: 209 SGVTAITAGGSHTCALTT--GGAVTCWGRNGNGQLGDGTTTQRSTPVNVLGLSSEVAAIT 266

Query: 217 ---------------------------------QPRPRAIAALAGETIVKVACGTNHTVA 243
                                            +  P  +  L+   +  +A G +HT A
Sbjct: 267 AGDVYTCALTTGGGVTCWGANWSGQLGDGTTDERSTPVDVVGLS-SGVTAIAAGNDHTCA 325

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           + + G V  WG   Y +LG      +  P  V     N +    A I+AG  ++     G
Sbjct: 326 ITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVV-----NGLSSRAAAIAAGDGHTCAMTTG 380

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHH-FVGADSSCISWGH 356
           G +  WG+       +G       P M + G +    D  +G+ H   +  +     WG+
Sbjct: 381 GGVSCWGRNWSGQLGDGTTTQRRTP-MQVEGLSSGVADITAGDSHTCALSTEGGVTCWGN 439

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            + G+LG G   Q+S+  P +V+ L    V+++  G  H+  +
Sbjct: 440 NESGQLGDGTTIQRST--PVQVEGLS-SGVVAITAGDSHTCAL 479



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 161/410 (39%), Gaps = 43/410 (10%)

Query: 10  VEEETGKEKGGELLFC------GSTCWDAVGRRKGALDGNLVSPTRLRPL--VGVDIRFV 61
           +  E      G++  C      G TCW A     G L G+  +  R  P+  VG+     
Sbjct: 258 LSSEVAAITAGDVYTCALTTGGGVTCWGA--NWSGQL-GDGTTDERSTPVDVVGLSSGVT 314

Query: 62  AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           A    + H  A+   G    WG N+  QLG G   Q+  P +V+ LS      A AG  H
Sbjct: 315 AIAAGNDHTCAITTGGGVSCWGVNQYSQLGDGTTTQQSTPVVVNGLSSRAAAIA-AGDGH 373

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           T  +T  G    +G N  GQLG G+      P  V  L S V     G   T  LS+  G
Sbjct: 374 TCAMTTGGGVSCWGRNWSGQLGDGTTTQRRTPMQVEGLSSGVADITAGDSHTCALSTEGG 433

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            +    G  + GQLG GT  + +T              P  +  L+   +V +  G +HT
Sbjct: 434 VTCW--GNNESGQLGDGTTIQRST--------------PVQVEGLS-SGVVAITAGDSHT 476

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
            A+ ++G V  WG  G G+LG+        P +V+      +      I+AG  ++    
Sbjct: 477 CALSTEGGVTCWGGNGSGQLGNGTTTQRSTPVQVEGLSSGVM-----AITAGDSHTCALT 531

Query: 302 GGGQLYMWGK--LKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
            GG +  WG       GD        P  ++ LS         G+    +  +     WG
Sbjct: 532 TGGGVTCWGGNWYGQLGDGTTTQRNMPVNVVGLSSGVAAIAAGGSHTCALSTEGGVTCWG 591

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              Y +LG G   + +   P +V+ L    V ++A GY H+  ++    V
Sbjct: 592 WNTYDQLGDGT--RTNHNTPVQVEGLS-SGVAAIAAGYAHTCALITSGEV 638


>gi|240255530|ref|NP_190350.4| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332644794|gb|AEE78315.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 954

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 103/368 (27%), Positives = 157/368 (42%), Gaps = 41/368 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+  V +D + ++  C + + V V  +G+ Y+WG    G+LGHG       P ++ E
Sbjct: 290 PKVLKSHVALDAQSIS--CGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDE 347

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSE-- 162
            +   ++ A  G  HT  VT  G+  A+G   H  G LG GS  +  +  PVR L     
Sbjct: 348 FNGSTVELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEG 405

Query: 163 --VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V A +CG   T +++S EG  +   G   +G LGHG     N               P
Sbjct: 406 IYVKAISCGPWHTAFVTS-EG-KLFTFGDGTFGALGHGDRISTNI--------------P 449

Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
           R + AL G   +K ACG  H+ AV        S G ++TWG G  GRLGH + +   +P 
Sbjct: 450 REVEALNGCRTIKAACGVWHSAAVVSVFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPS 509

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNL 333
            V      +       ++ G   +   +  GQ+Y  G    + D    P  +    G + 
Sbjct: 510 CVTELDTTSF----QQVACGQSITVALSMSGQVYAMGTADPSHDIVRAPSCIEGGLGKSF 565

Query: 334 RCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
               +   HH   + + +   +WG    G+LG+G    +   MP  V  L+G  V  V C
Sbjct: 566 VQEVACGFHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYR--CMPTLVKALKGKQVRKVVC 623

Query: 392 GYGHSLVI 399
           G  ++  I
Sbjct: 624 GSNYTATI 631



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +        ++CGTN+ V V  +G +Y+WG    GRLGH        P+ +D F 
Sbjct: 290 PKVLKSHVALDAQSISCGTNYAVLVTKQGQMYSWGEESGGRLGHGVCSYVPHPKLIDEFN 349

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            + V     +   G  ++      G LY WG   +N            W   + L  + G
Sbjct: 350 GSTV----ELADCGEFHTCAVTASGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEG 405

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             ++ +  G  H  FV ++    ++G   +G LG+G   + S+ +P++V+ L G   I  
Sbjct: 406 IYVKAISCGPWHTAFVTSEGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIKA 463

Query: 390 ACGYGHSLVIV 400
           ACG  HS  +V
Sbjct: 464 ACGVWHSAAVV 474


>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
          Length = 531

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLDALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 IEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT+      FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLDA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GL 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   VI
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVI 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.7 bits (99), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  I+ A    +HT      G
Sbjct: 276 PAHIMVEKERVIEIAACHSAHTSAAKTQG 304


>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
 gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
          Length = 524

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 106/365 (29%), Positives = 152/365 (41%), Gaps = 36/365 (9%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
           L GV    V+AG    H +A+  +G  Y WG N  GQLG+   +    P +VS       
Sbjct: 46  LPGVVFTQVSAGI--NHSLAMGSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPDGVTF 103

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVSEVTATACGA 170
            +  AG  H++ V  DGN+ A+G N  G+LG+G+      P  V    + S VT +   A
Sbjct: 104 TQVSAGADHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVTISQVMA 163

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
                L+      I + G  + GQLG GT     T  SSV L   A   P      AG T
Sbjct: 164 GGFHSLAVGSNGDIYSWGYNRSGQLGDGT-----TLASSVPLKVSAGAVP------AGVT 212

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV- 289
             +V+ G  H++A+ S G  Y WG    G+LG         P  V          P  V 
Sbjct: 213 FSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSA--------PAGVS 264

Query: 290 ---ISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGN 340
              +SAG ++S      G+ Y W     G+L N      + P  +  + G  +  + +G 
Sbjct: 265 FTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQVSAGA 324

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            H   +GAD +  +WG    G+LG       +S +P  V   +G+    +  G  HSL  
Sbjct: 325 DHSLAIGADGNAYAWGLNVNGQLGNNTI--TTSTVPVMVTAPDGVTFTRIEAGGLHSLTA 382

Query: 400 VDRTN 404
               N
Sbjct: 383 ASDEN 387



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 155/362 (42%), Gaps = 53/362 (14%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCY-----TWGRNERGQLGHGDKIQRDRPTIVSELSKYKI 112
             F  A  V+   + V + G  +     T+G    G    G  +    P +V        
Sbjct: 2   FSFRVASVVALSALLVGMSGSAFAAPAETFGS---GPTAGGTTVSGVLPGVV-------F 51

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-----EVTATA 167
            +  AG +H++ +  DGN  A+G+N  GQLG+ SI N    S V  LVS       T  +
Sbjct: 52  TQVSAGINHSLAMGSDGNIYAWGYNSSGQLGNNSILN----SSVPVLVSTPDGVTFTQVS 107

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
            GAD ++ + S   A     G    G+LG+GT     +  SSV L   A   P      +
Sbjct: 108 AGADHSLAVGSDGNAYAW--GRNTDGRLGNGT-----STGSSVPLLVSAGAVP------S 154

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
           G TI +V  G  H++AV S G +Y+WG+   G+LG        VP +V        +P  
Sbjct: 155 GVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSA----GAVPAG 210

Query: 288 AV---ISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLM--DLSGWNLRCMDS 338
                +SAG  +S      G+ Y WG+ +      G     P P +    +G +   + +
Sbjct: 211 VTFSQVSAGDRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQVSA 270

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G++H   VG+D    +WG+   G+LG       SS  P  V  + G+ V  V+ G  HSL
Sbjct: 271 GDLHSLAVGSDGKAYAWGNNDSGQLGNAT--TTSSLAPVLVSPMGGLAVTQVSAGADHSL 328

Query: 398 VI 399
            I
Sbjct: 329 AI 330



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 136/323 (42%), Gaps = 32/323 (9%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE---LSKYK 111
           GV    V+AG    H +AV  +G  Y WGRN  G+LG+G       P +VS     S   
Sbjct: 100 GVTFTQVSAGA--DHSLAVGSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVT 157

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--LVSEVTATACG 169
           I +  AG  H++ V  +G+  ++G+N+ GQLG G+      P  V    + + VT +   
Sbjct: 158 ISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPAGVTFSQVS 217

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           A     L+          G  + GQLG G+ +                P P  ++A AG 
Sbjct: 218 AGDRHSLAIGSNGKTYAWGEARGGQLGIGSISR--------------TPAPALVSAPAGV 263

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
           +  +V+ G  H++AV S G  Y WG    G+LG+        P  V       V      
Sbjct: 264 SFTQVSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGLAVTQ---- 319

Query: 290 ISAGSVNSSCTAGGGQLYMWG-----KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           +SAG+ +S      G  Y WG     +L NN       P  +    G     +++G +H 
Sbjct: 320 VSAGADHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMVTAPDGVTFTRIEAGGLHS 379

Query: 344 FVGA-DSSCISWGHAQYGELGYG 365
              A D +  +WG   +G+LG G
Sbjct: 380 LTAASDENTYTWGANSFGQLGNG 402



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 101/227 (44%), Gaps = 23/227 (10%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           GV    V+AG    H +A+   G+ Y WG    GQLG G   +   P +VS  +     +
Sbjct: 210 GVTFSQVSAG--DRHSLAIGSNGKTYAWGEARGGQLGIGSISRTPAPALVSAPAGVSFTQ 267

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP---SPVRCLVSEVTATACGAD 171
             AG  H++ V  DG + A+G N  GQLG+ +  + + P   SP+  L   VT  + GAD
Sbjct: 268 VSAGDLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVSPMGGL--AVTQVSAGAD 325

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            ++ + +   A     GL   GQLG+      NT  +S          P  + A  G T 
Sbjct: 326 HSLAIGADGNAYAW--GLNVNGQLGN------NTITTSTV--------PVMVTAPDGVTF 369

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            ++  G  H++   S    YTWG   +G+LG+       VP  +  F
Sbjct: 370 TRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAISRF 416



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 77/159 (48%), Gaps = 9/159 (5%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  +    GV    V+AG    H +AV  +G+ Y WG N+ GQLG+        P +VS
Sbjct: 253 APALVSAPAGVSFTQVSAG--DLHSLAVGSDGKAYAWGNNDSGQLGNATTTSSLAPVLVS 310

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--- 162
            +    + +  AG  H++ +  DGN+ A+G N +GQLG     N I  S V  +V+    
Sbjct: 311 PMGGLAVTQVSAGADHSLAIGADGNAYAWGLNVNGQLG----NNTITTSTVPVMVTAPDG 366

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           VT T   A     L++    +    G   +GQLG+GT +
Sbjct: 367 VTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSD 405



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 4/122 (3%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P  + P+ G+ +  V+AG    H +A+  +G  Y WG N  GQLG+        P +V
Sbjct: 304 LAPVLVSPMGGLAVTQVSAGA--DHSLAIGADGNAYAWGLNVNGQLGNNTITTSTVPVMV 361

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR--CLVSE 162
           +        +  AG  H++    D N+  +G N  GQLG+G+    + P  +    +++E
Sbjct: 362 TAPDGVTFTRIEAGGLHSLTAASDENTYTWGANSFGQLGNGTSDGSLVPVAISRFPVITE 421

Query: 163 VT 164
           V+
Sbjct: 422 VS 423


>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Takifugu rubripes]
          Length = 1031

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 149/348 (42%), Gaps = 34/348 (9%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C   H V +  +G  YT G N  GQLGH        P  V  L   KI     G++H++ 
Sbjct: 40  CGGQHSVFLLHDGSVYTCGSNSCGQLGHNKP--GITPEFVGALDTQKITLVSCGQAHSLA 97

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
           V E G   A+G  + GQLG G+    +  P  ++ L    +    CG    + LS  +  
Sbjct: 98  VNEQGQVFAWGAGEEGQLGLGTTETAVRIPRLIKRLCDHRIAQVMCGNQHCIALS--KDG 155

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            +   G    GQLG G       K    KL       P+ + +LAG  + K+  G +H+ 
Sbjct: 156 QLFTWGQNTSGQLGLG-------KGEPSKLF------PQPLKSLAGIPLAKITAGGDHSF 202

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+   G V+ WG    G+LG  + +D  VP  +   +   V+     IS G  +++    
Sbjct: 203 ALSLSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVH----ISCGEEHTAALTK 258

Query: 303 GGQLYM-----WGKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CISW 354
            G L+      WG+L +    + + P+ +++L G  +  +  G  H    A SS    ++
Sbjct: 259 DGGLFTFGDGSWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGGVYAF 318

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEG-MH--VISVACGYGHSLVI 399
           G   +G+LG G      S  P K   L G +H  V  + CG  HS ++
Sbjct: 319 GCNSHGQLGTGVLSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLL 366



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/233 (30%), Positives = 105/233 (45%), Gaps = 21/233 (9%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G+L   G      +G  KG  + + + P  L+ L G+ +  + AG    H  A+ + G
Sbjct: 153 KDGQLFTWGQNTSGQLGLGKG--EPSKLFPQPLKSLAGIPLAKITAG--GDHSFALSLSG 208

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WG+N+ GQLG  D   R  P  +  L   K+     G  HT  +T+DG    FG  
Sbjct: 209 AVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDG 268

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             GQLG GS  NE+ P  V  L+ +EV+   CG   T+  +   G  +   G   +GQLG
Sbjct: 269 SWGQLGHGSTANELLPRRVLELMGTEVSQITCGRHHTLAFAPSSGG-VYAFGCNSHGQLG 327

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE---TIVKVACGTNHTVAVDS 246
            G             L+ +  P P   + L+G    T+ K+ CG +H+  + S
Sbjct: 328 TGV------------LSADKSPYPLKTSFLSGSIHGTVTKITCGGDHSFLLYS 368



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 37/330 (11%)

Query: 82  WGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           WG+ + GQLG G  ++R+    P   +  +   +K+   G  H+V +  DG+    G N 
Sbjct: 4   WGKAKDGQLGIG--VERNPMFEPRNCNVFTGRGLKEIVCGGQHSVFLLHDGSVYTCGSNS 61

Query: 139 HGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            GQLG    +  I P  V  L   ++T  +CG   +  L+  E   +   G  + GQLG 
Sbjct: 62  CGQLGHN--KPGITPEFVGALDTQKITLVSCGQAHS--LAVNEQGQVFAWGAGEEGQLGL 117

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G      T +++V++       PR I  L    I +V CG  H +A+   G ++TWG   
Sbjct: 118 G------TTETAVRI-------PRLIKRLCDHRIAQVMCGNQHCIALSKDGQLFTWGQNT 164

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
            G+LG  + +  +  P+ +    ++    P A I+AG  +S   +  G ++ WGK K   
Sbjct: 165 SGQLGLGKGEPSKLFPQPL----KSLAGIPLAKITAGGDHSFALSLSGAVFGWGKNKAGQ 220

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+  D   P  +  L    +  +  G  H   +  D    ++G   +G+LG+G    
Sbjct: 221 LGLNDIQDRAVPCHIKFLRSQKVVHISCGEEHTAALTKDGGLFTFGDGSWGQLGHG--ST 278

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +  +P++V  L G  V  + CG  H+L  
Sbjct: 279 ANELLPRRVLELMGTEVSQITCGRHHTLAF 308


>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
 gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
           [Cryptosporidium muris RN66]
          Length = 477

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 161/375 (42%), Gaps = 46/375 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +  L   + R     C   H   +   G    WG    GQLG GD      P ++
Sbjct: 30  IEPKLIESLYSFN-RIKEVCCGGHHSAVITHSGELIVWGYGGCGQLGLGDLKDIVIPRVM 88

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI------EPSPVRC 158
           + +    +        H+  + EDG    +G NK G+LG GS+   +       P  V  
Sbjct: 89  TSIK--NVINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEK 146

Query: 159 LVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L++E V   +CG+  T  L+ +  A     GL   G+LGHG  N+  T            
Sbjct: 147 LLNEKVIKVSCGSFHTACLTDLNKA--YTWGLGMQGRLGHGDTNDVYT------------ 192

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P+ I +LAG ++  + CG +HT  + + G VY  G G +G+LG   ++D ++P+ +  
Sbjct: 193 --PKLIESLAGLSVKNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFGSKEDIYIPKLLQG 250

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP----------LMD 327
              N  +     +S G  +S+     G++Y WG+    G  +  P+P          L  
Sbjct: 251 SLTNKSIKE---VSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGPEPDILSPKLVEKLNS 307

Query: 328 LSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           +   N+ C   G+ H  V ++     +WG  +   LG+G    K +  P    IL+  ++
Sbjct: 308 IIAVNISC---GHSHTVVISNIGDVYAWGVTR--NLGHGVIDSKPND-PTLHPILQNKNI 361

Query: 387 ISVACGYGHSLVIVD 401
           + V+CG  H++ + D
Sbjct: 362 VQVSCGKTHTIALSD 376



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 157/336 (46%), Gaps = 30/336 (8%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKY-KIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG +E GQLG   +     P ++  L  + +IK+   G  H+ V+T  G  + +G+   G
Sbjct: 13  WGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIVWGYGGCG 72

Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           QLG G +++ + P  V   +  V   +C    +  +  +E   +   G  + G+LG G+ 
Sbjct: 73  QLGLGDLKDIVIPR-VMTSIKNVINVSCSDRHSAAI--LEDGRLYTWGCNKSGKLGIGS- 128

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
                   +V L       P+ +  L  E ++KV+CG+ HT  +      YTWG G  GR
Sbjct: 129 -------LNVNLNNNIICTPQLVEKLLNEKVIKVSCGSFHTACLTDLNKAYTWGLGMQGR 181

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLK-N 314
           LGH +  D + P+ ++     +V      I  G  +++     G++Y      +GKL   
Sbjct: 182 LGHGDTNDVYTPKLIESLAGLSV----KNIVCGGHHTAILLNNGKVYFCGGGAFGKLGFG 237

Query: 315 NGDDWMYPKPLM-DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSS 372
           + +D   PK L   L+  +++ +  G  H   +       +WG  Q G LG+   G +  
Sbjct: 238 SKEDIYIPKLLQGSLTNKSIKEVSLGYQHSAVITTKGKVYTWG--QGGRLGHIYNGPEPD 295

Query: 373 AM-PKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
            + PK V+ L  +  ++++CG+ H++VI   +N+G+
Sbjct: 296 ILSPKLVEKLNSIIAVNISCGHSHTVVI---SNIGD 328


>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Otolemur garnettii]
          Length = 531

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  +
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERI 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT+      FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   ++
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERIV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERIVEIAACHSAHTSAAKTQG 304


>gi|195441394|ref|XP_002068495.1| GK20388 [Drosophila willistoni]
 gi|194164580|gb|EDW79481.1| GK20388 [Drosophila willistoni]
          Length = 1054

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 23/234 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR---DRPTI 103
           P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG     +    + P  
Sbjct: 130 PKIIRSLVSKHV--VQIACGNNHSLALTSCGELYSWGSNIYGQLGVKPPQELSHCNYPLR 187

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE- 162
           ++ L    +     G +H+ ++++      FG N  GQLG     N   P+ ++ L +  
Sbjct: 188 LTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQLKTLRTLG 247

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   ACG +F+V+L++  G     AG   YGQLGHG++                +  PR 
Sbjct: 248 VRFVACGDEFSVFLTNEGGVFTCGAG--TYGQLGHGSNTN--------------EMLPRM 291

Query: 223 IAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           +  L G TI +VACG  HT+A V S+G VY +G G  G+LG+R      +P+ V
Sbjct: 292 VMELMGSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQLGNRSTNSVTLPQEV 345



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 155/339 (45%), Gaps = 46/339 (13%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           + WG    GQLG G  I+ ++  I S++       +++   G  HT+ +T +G   A G 
Sbjct: 4   FCWGNASHGQLGMGG-IEDEQILIPSQIPWKPDAPLRQIACGHRHTLFLTANGKVYACGN 62

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQ 191
           N   QLG         P+    L+ E     V A ACG+  ++ L+  E   +L+ G   
Sbjct: 63  NDQAQLGHNL------PTKRPLLIPELQNYVVVAIACGSRHSMALT--EWGQVLSWGDND 114

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            GQLG  TD       S ++L       P+ I +L  + +V++ACG NH++A+ S G +Y
Sbjct: 115 CGQLGQSTD------QSIIEL-------PKIIRSLVSKHVVQIACGNNHSLALTSCGELY 161

Query: 252 TWGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
           +WG   YG+LG +  ++      P R+       +  P A I+ G  +S   +    ++ 
Sbjct: 162 SWGSNIYGQLGVKPPQELSHCNYPLRLTTL----LGIPLATIACGGNHSFLISKSSAVFG 217

Query: 309 WGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGE 361
           +G+        N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+
Sbjct: 218 FGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTYGQ 277

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           LG+G     +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 278 LGHG--SNTNEMLPRMVMELMGSTITQVACGNRHTLALV 314



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/351 (25%), Positives = 156/351 (44%), Gaps = 33/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G  D  ++ P+++       +R +A G    H + +   G+ Y  G N++ QLGH   + 
Sbjct: 18  GIEDEQILIPSQIPWKPDAPLRQIACG--HRHTLFLTANGKVYACGNNDQAQLGHN--LP 73

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
             RP ++ EL  Y +     G  H++ +TE G  L++G N  GQLG  + ++ IE P  +
Sbjct: 74  TKRPLLIPELQNYVVVAIACGSRHSMALTEWGQVLSWGDNDCGQLGQSTDQSIIELPKII 133

Query: 157 RCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           R LVS+ V   ACG + ++ L+S     + + G   YGQLG     E +  +        
Sbjct: 134 RSLVSKHVVQIACGNNHSLALTSC--GELYSWGSNIYGQLGVKPPQELSHCN-------- 183

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               P  +  L G  +  +ACG NH+  +     V+ +G    G+LG  ++ +   P ++
Sbjct: 184 ---YPLRLTTLLGIPLATIACGGNHSFLISKSSAVFGFGRNNCGQLGLNDESNRAYPTQL 240

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGD-DWMYPKPLMDLS 329
              +   V      ++ G   S      G ++      +G+L +  + + M P+ +M+L 
Sbjct: 241 KTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGTYGQLGHGSNTNEMLPRMVMELM 296

Query: 330 GWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           G  +  +  GN H    V +      +G    G+L  G     S  +P++V
Sbjct: 297 GSTITQVACGNRHTLALVPSRGRVYGFGLGSSGQL--GNRSTNSVTLPQEV 345



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 83/183 (45%), Gaps = 4/183 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G +      +   P RL  L+G+ +  +A G    H   +      
Sbjct: 158 GELYSWGSNIYGQLGVKPPQELSHCNYPLRLTTLLGIPLATIACG--GNHSFLISKSSAV 215

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + +GRN  GQLG  D+  R  PT +  L    ++    G   +V +T +G     G   +
Sbjct: 216 FGFGRNNCGQLGLNDESNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGTY 275

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG GS  NE+ P  V  L+ S +T  ACG   T+ L    G  +   GL   GQLG+ 
Sbjct: 276 GQLGHGSNTNEMLPRMVMELMGSTITQVACGNRHTLALVPSRG-RVYGFGLGSSGQLGNR 334

Query: 199 TDN 201
           + N
Sbjct: 335 STN 337


>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
 gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 2 [Pan troglodytes]
          Length = 527

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Strongylocentrotus purpuratus]
          Length = 1070

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 45/343 (13%)

Query: 80  YTWGRNERGQLG---HGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           ++WG  + GQLG    GD +     P  V  L+  +I++   G  HT V+  DG  +  G
Sbjct: 4   FSWGCTQDGQLGISGLGDDVPSLSSPREVPALAGKQIREISCGLRHTCVLLRDGTVMMCG 63

Query: 136 WNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            N  GQLG     +E+   P    LV  +T  +CG D T  L+  +   +L  G    GQ
Sbjct: 64  ANDRGQLGQDRPGSELAHVPATETLV--ITQVSCGNDHT--LAVTDRGQVLGWGRNDRGQ 119

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            G       +T DS      E + +PR + +L+   + +VACG+ H++A+   G ++ WG
Sbjct: 120 CG------LSTGDS------EDKRKPRFLKSLSSCQVAQVACGSMHSMALTRDGRIFAWG 167

Query: 255 FGGYGRLGHREQKDEWVPRRV---DVFQRNNVLP--PEAVISAGSVNSSCTAGGGQLYMW 309
              +G+LG         P R    D  Q+ + LP  P   ++ G  +S   +  G ++ W
Sbjct: 168 DNSFGQLGI------GAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGW 221

Query: 310 GKLKNN--------GDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYG 360
           G  KNN         +D + P PL +L    ++ +  G N    + A      +G    G
Sbjct: 222 G--KNNCGQLGLGTTEDRVSPTPLKNLKTKQVKYIACGQNYTAILTASGGLFLFGQGSEG 279

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
           +LG+G +  + +  P+ V    G  +  VACG  H+LV+  RT
Sbjct: 280 QLGHGSHSNEVN--PRSVQGFLGSEITQVACGRQHTLVLEGRT 320



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 102/222 (45%), Gaps = 25/222 (11%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQ--LGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VSC   H +AV   G+   WGRN+RGQ  L  GD   + +P  +  LS  ++ +   G  
Sbjct: 93  VSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPRFLKSLSSCQVAQVACGSM 152

Query: 121 HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI---EPSPVRCLVS-EVTATACGADFTVWL 176
           H++ +T DG   A+G N  GQLG G+    +    P  +  L    +   ACG   +  L
Sbjct: 153 HSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRLACGGWHSFAL 212

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            SV GA +   G    GQLG GT               E +  P  +  L  + +  +AC
Sbjct: 213 -SVSGA-VFGWGKNNCGQLGLGTT--------------EDRVSPTPLKNLKTKQVKYIAC 256

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           G N+T  + + G ++ +G G  G+LGH    +E  PR V  F
Sbjct: 257 GQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGF 298



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 77/156 (49%), Gaps = 4/156 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +L  L GV IR +A  C   H  A+ V G  + WG+N  GQLG G    R  PT +  
Sbjct: 188 PQQLSSLPGVPIRRLA--CGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPTPLKN 245

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L   ++K    G+++T ++T  G    FG    GQLG GS  NE+ P  V+  + SE+T 
Sbjct: 246 LKTKQVKYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGSEITQ 305

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
            ACG   T+ L    G    + G    GQLG   D+
Sbjct: 306 VACGRQHTLVLEGRTG-RFFSLGQGSKGQLGLDNDS 340



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 146/350 (41%), Gaps = 44/350 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +L SP  +  L G  IR ++ G    H   +  +G     G N+RGQLG      +DRP 
Sbjct: 25  SLSSPREVPALAGKQIREISCGLR--HTCVLLRDGTVMMCGANDRGQLG------QDRPG 76

Query: 103 IVSELSKYK------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ--LGSGSIRNEIEPS 154
             SEL+         I +   G  HT+ VT+ G  L +G N  GQ  L +G   ++ +P 
Sbjct: 77  --SELAHVPATETLVITQVSCGNDHTLAVTDRGQVLGWGRNDRGQCGLSTGDSEDKRKPR 134

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            ++ L S +V   ACG+  ++ L+      I   G   +GQLG G       +D      
Sbjct: 135 FLKSLSSCQVAQVACGSMHSMALT--RDGRIFAWGDNSFGQLGIGAPGRTLYRD------ 186

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ +++L G  I ++ACG  H+ A+   G V+ WG    G+LG    +D   P 
Sbjct: 187 -----HPQQLSSLPGVPIRRLACGGWHSFALSVSGAVFGWGKNNCGQLGLGTTEDRVSPT 241

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMD 327
            +   +   V      I+ G   ++     G L+++G+         +  + + P+ +  
Sbjct: 242 PLKNLKTKQV----KYIACGQNYTAILTASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQG 297

Query: 328 LSGWNLRCMDSGNMHHFV--GADSSCISWGHAQYGELGYGPYGQKSSAMP 375
             G  +  +  G  H  V  G      S G    G+LG      KS A P
Sbjct: 298 FLGSEITQVACGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCASP 347



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 101/254 (39%), Gaps = 54/254 (21%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD-VEGRCYTWGRNERGQLGHGDKIQRDRP 101
           N V+P  ++  +G +I  VA  C   H + ++   GR ++ G+  +GQLG  +   +   
Sbjct: 288 NEVNPRSVQGFLGSEITQVA--CGRQHTLVLEGRTGRFFSLGQGSKGQLGLDNDSSKSCA 345

Query: 102 TIVS---------------ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS-- 144
           + V                E S+  I    AG   +  +   GN      +    + S  
Sbjct: 346 SPVPGPWEAPSSTEGCSNGEESRSIIGSIFAGGDQSFCIVSRGNDPDHPLDFREAIPSIE 405

Query: 145 -----GSIRNEI-------EPS-PVRCLVSEVTATAC-GADFTVWLSSVEGASILNAGLP 190
                  +  E+       EPS  V+ L   +++ AC  A F V   S     +   G  
Sbjct: 406 PVVLTKDLLQEVSESSPLLEPSKAVQTLEMALSSPACLNASFLVGAGS---GGLFLFGQG 462

Query: 191 QYGQLGHGT-DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK-G 248
             GQLGHG+  NE N               PR++    G  I +VACG  HT+ ++ + G
Sbjct: 463 SEGQLGHGSHSNEVN---------------PRSVKDFLGNEITQVACGRQHTLVLEGRTG 507

Query: 249 YVYTWGFGGYGRLG 262
             Y+ G G  G+LG
Sbjct: 508 GFYSLGQGSKGQLG 521



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 38/93 (40%), Gaps = 10/93 (10%)

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
           G    FG    GQLG GS  NE+ P  V+  + +E+T  ACG   T+ L    G      
Sbjct: 454 GGLFLFGQGSEGQLGHGSHSNEVNPRSVKDFLGNEITQVACGRQHTLVLEGRTGG----- 508

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
               +  LG G+  +    + S K      P P
Sbjct: 509 ----FYSLGQGSKGQLGLDNGSSKSCASLVPGP 537


>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
           [Ornithorhynchus anatinus]
          Length = 1006

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 102/210 (48%), Gaps = 21/210 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKA 115
           DI+ V   C   H +A+      ++WG+N+ GQLG G + ++   P ++  L      + 
Sbjct: 85  DIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQI 144

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L S+ +    CG D T 
Sbjct: 145 AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 204

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 205 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQ 247

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
           VACG  HT A V S G +Y++G GG G+LG
Sbjct: 248 VACGRQHTSAFVPSSGRIYSFGLGGNGQLG 277



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 23/220 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
           VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  +  LS  +I +   G 
Sbjct: 36  VAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGY 95

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA-DFTVW 175
            H++ +++     ++G NK+GQLG G   + +  P  ++ L  +  +   A GA  F + 
Sbjct: 96  YHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLT 155

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           LS     +I   G  ++GQLG   +N+                 P  + +L  + IV + 
Sbjct: 156 LS----GAIFGWGRNKFGQLGLNDENDRYV--------------PNLLKSLRSQKIVYIC 197

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 198 CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 237



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L+G+    +AAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 129 SPQLIKSLLGIPFMQIAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 186

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 187 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 246

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 247 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 280



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/320 (23%), Positives = 129/320 (40%), Gaps = 49/320 (15%)

Query: 73  VDVEGRCYT----WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           V  +GR +T    W   ER Q              V  L    I     G +HT+ + + 
Sbjct: 6   VPAQGRMWTQDLWWDSQEREQ--------------VVALDAQNIVAVSCGDAHTLALNDK 51

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILN 186
           G   A+G +  GQLG       I  P  ++ L   ++   +CG   ++ LS  +G+ + +
Sbjct: 52  GQVYAWGLDTDGQLGLPGTEECIRVPRNIKSLSDIQIVQVSCGYYHSLALS--KGSEVFS 109

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  +YGQLG G               ++ Q  P+ I +L G   +++A G  H+  +  
Sbjct: 110 WGQNKYGQLGLG-------------FEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTL 156

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAGSVNSSC 299
            G ++ WG   +G+LG  ++ D +VP  +   +   ++          A+   G V +  
Sbjct: 157 SGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFG 216

Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHA 357
             G GQL       N+    + P+ + +L G  +  +  G  H   FV +     S+G  
Sbjct: 217 AGGYGQLG-----HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLG 271

Query: 358 QYGELGYGPYGQKSSAMPKK 377
             G+LG G    + S    K
Sbjct: 272 GNGQLGTGSTSNRKSPFTVK 291



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 88/194 (45%), Gaps = 16/194 (8%)

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EW 270
           L +++Q R + +A L  + IV V+CG  HT+A++ KG VY WG    G+LG    ++   
Sbjct: 17  LWWDSQEREQVVA-LDAQNIVAVSCGDAHTLALNDKGQVYAWGLDTDGQLGLPGTEECIR 75

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPK 323
           VPR +       ++     +S G  +S   + G +++ WG+       L         P+
Sbjct: 76  VPRNIKSLSDIQIVQ----VSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQ 131

Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            +  L G     + +G  H FV   S  I  WG  ++G+LG     +    +P  +  L 
Sbjct: 132 LIKSLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLN--DENDRYVPNLLKSLR 189

Query: 383 GMHVISVACGYGHS 396
              ++ + CG  H+
Sbjct: 190 SQKIVYICCGEDHT 203



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 110/247 (44%), Gaps = 31/247 (12%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLG-HGTDNEYNTKDSSVKLAYEAQPRPR 221
           + A +CG   T+ L+  +   +   GL   GQLG  GT+              E    PR
Sbjct: 35  IVAVSCGDAHTLALN--DKGQVYAWGLDTDGQLGLPGTE--------------ECIRVPR 78

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQR 280
            I +L+   IV+V+CG  H++A+     V++WG   YG+LG   E K +  P+ +    +
Sbjct: 79  NIKSLSDIQIVQVSCGYYHSLALSKGSEVFSWGQNKYGQLGLGFEFKKQTSPQLI----K 134

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLR 334
           + +  P   I+AG  +S      G ++ WG+ K      N+ +D   P  L  L    + 
Sbjct: 135 SLLGIPFMQIAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV 194

Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G  H   +  +    ++G   YG+LG+     + +  P+KV  L G  V  VACG 
Sbjct: 195 YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQVACGR 252

Query: 394 GHSLVIV 400
            H+   V
Sbjct: 253 QHTSAFV 259



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+ L    I ++   C   H  A+  EG  +T+G    GQLGH        P  V E
Sbjct: 182 PNLLKSLRSQKIVYIC--CGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 239

Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L    + +   GR HT   V   G   +FG   +GQLG+GS  N   P  V+
Sbjct: 240 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 291


>gi|449447492|ref|XP_004141502.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 33/331 (9%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G+  +R+    +  L    +    AG  +++ +TEDG    +GWN+ G 
Sbjct: 10  WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG     ++E  PS V+ L +     A    +       +G +    G  +YGQ G   +
Sbjct: 70  LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGEEPE 128

Query: 201 NEYNT-KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
            + NT +     +A   +  P+ I       + +VA G  H+V +  +G+V+TWG     
Sbjct: 129 KKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWG----- 176

Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
                     W P    ++ V  R   L    +I+ G+ ++      G L+ WG  +   
Sbjct: 177 --------QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228

Query: 314 -NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
              GD      P P+  LSG  L  + +G  H     D+  +  WG  ++G LG+G   +
Sbjct: 229 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDK 288

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            S  +P+KV +L G  ++ ++CG  HS+ + 
Sbjct: 289 SSKMVPQKVQLLSGEEIVQISCGGTHSVAVT 319



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 77/315 (24%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
           P++++ L   +++ V A     HC+AVD +GR Y WG NE GQ G         G   +R
Sbjct: 82  PSQVKALS--NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRR 139

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVT-------------------------------- 126
           D         K  +++  AG +H+VV+T                                
Sbjct: 140 DIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMV 199

Query: 127 --------------EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTATACGA 170
                         EDG   A+G N++GQLG+G  +   +P PV+ L  ++ V   A G 
Sbjct: 200 RLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 259

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T   +  +   +   G  ++G+LG G DN     D S K+       P+ +  L+GE 
Sbjct: 260 HST---ALTDNGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------PQKVQLLSGEE 304

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           IV+++CG  H+VAV S G ++++G G +GRLG+  +     P  V +    ++ PP    
Sbjct: 305 IVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPI----DIPPPRGRT 360

Query: 291 SAGSVNSSCTAGGGQ 305
             G   +   A GG+
Sbjct: 361 ENGHWIAKLVACGGR 375



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 164/378 (43%), Gaps = 55/378 (14%)

Query: 50  LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELS 108
           ++ L   ++  V AG  S + +A+  +G+ +TWG N+RG LGH    + +  P+ V  LS
Sbjct: 32  IKALESQNVCSVVAG--SRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALS 89

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
             KI +A  G  H + V + G + A+G N++GQ G    + +    P R  ++      C
Sbjct: 90  NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIA--IPQRC 147

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
                V          + AG         GT +   T++  V    +  P P  I  ++ 
Sbjct: 148 APKLIV--------RQVAAG---------GTHSVVLTREGHVWTWGQPWP-PGDITQISV 189

Query: 229 ETIVK-------VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
              V+       +A G  H +A+   G ++ WG   YG+LG  + +    P  V      
Sbjct: 190 PVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNL 333
            ++     I+AG  +S+     G++Y WG+ +        N+    M P+ +  LSG  +
Sbjct: 250 TLVD----IAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEI 305

Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--------LEGM 384
             +  G  H   V +D    S+G   +G LGYG   + ++  P++V I         E  
Sbjct: 306 VQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGR--KVTTGQPEEVPIDIPPPRGRTENG 363

Query: 385 HVIS--VACGYGHSLVIV 400
           H I+  VACG  H+L +V
Sbjct: 364 HWIAKLVACGGRHTLALV 381



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 47  PTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P R++   G+D +R +A G    H +A+  +G  + WG NE GQLG GD   R +P  V 
Sbjct: 190 PVRVQ---GLDMVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV-SE 162
            LS   +    AG  H+  +T++G    +G  +HG+LG G     +++ P  V+ L   E
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE 304

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +   +CG   +V ++S     + + G   +G+LG+G      T     ++  +  P PR 
Sbjct: 305 IVQISCGGTHSVAVTS--DGRMFSFGRGDHGRLGYG---RKVTTGQPEEVPIDIPP-PRG 358

Query: 223 IAALAGETIVK-VACGTNHTVAV 244
                G  I K VACG  HT+A+
Sbjct: 359 RTE-NGHWIAKLVACGGRHTLAL 380


>gi|449481449|ref|XP_004156186.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC1-like [Cucumis sativus]
          Length = 390

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 146/331 (44%), Gaps = 33/331 (9%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G+  +R+    +  L    +    AG  +++ +TEDG    +GWN+ G 
Sbjct: 10  WGSGEDGQLGLGNNEEREWVCAIKALESQNVCSVVAGSRNSLAITEDGKLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG     ++E  PS V+ L +     A    +       +G +    G  +YGQ G   +
Sbjct: 70  LGHPAGTKSENVPSQVKALSNVKIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGEEPE 128

Query: 201 NEYNT-KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
            + NT +     +A   +  P+ I       + +VA G  H+V +  +G+V+TWG     
Sbjct: 129 KKDNTGRPPRRDIAIPQRCAPKLI-------VRQVAAGGTHSVVLTREGHVWTWG----- 176

Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
                     W P    ++ V  R   L    +I+ G+ ++      G L+ WG  +   
Sbjct: 177 --------QPWPPGDITQISVPVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQ 228

Query: 314 -NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQ 369
              GD      P P+  LSG  L  + +G  H     D+  +  WG  ++G LG+G   +
Sbjct: 229 LGTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDK 288

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            S  +P+KV +L G  ++ ++CG  HS+ + 
Sbjct: 289 SSKMVPQKVQLLSGEEIVQISCGGTHSVAVT 319



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 137/315 (43%), Gaps = 77/315 (24%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
           P++++ L   +++ V A     HC+AVD +GR Y WG NE GQ G         G   +R
Sbjct: 82  PSQVKALS--NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRR 139

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVT-------------------------------- 126
           D         K  +++  AG +H+VV+T                                
Sbjct: 140 DIAIPQRCAPKLIVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDITQISVPVRVQGLDMV 199

Query: 127 --------------EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTATACGA 170
                         EDG   A+G N++GQLG+G  +   +P PV+ L  ++ V   A G 
Sbjct: 200 RLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVDIAAGGW 259

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T   +  +   +   G  ++G+LG G DN     D S K+       P+ +  L+GE 
Sbjct: 260 HST---ALTDNGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------PQKVQLLSGEE 304

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           IV+++CG  H+VAV S G ++++G G +GRLG+  +     P  V +    ++ PP    
Sbjct: 305 IVQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGRKVTTGQPEEVPI----DIPPPRGRT 360

Query: 291 SAGSVNSSCTAGGGQ 305
             G   +   A GG+
Sbjct: 361 ENGHWIAKLVACGGR 375



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 164/378 (43%), Gaps = 55/378 (14%)

Query: 50  LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELS 108
           ++ L   ++  V AG  S + +A+  +G+ +TWG N+RG LGH    + +  P+ V  LS
Sbjct: 32  IKALESQNVCSVVAG--SRNSLAITEDGKLFTWGWNQRGTLGHPAGTKSENVPSQVKALS 89

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
             KI +A  G  H + V + G + A+G N++GQ G    + +    P R  ++      C
Sbjct: 90  NVKIVQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPEKKDNTGRPPRRDIA--IPQRC 147

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
                V          + AG         GT +   T++  V    +  P P  I  ++ 
Sbjct: 148 APKLIV--------RQVAAG---------GTHSVVLTREGHVWTWGQPWP-PGDITQISV 189

Query: 229 ETIVK-------VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
              V+       +A G  H +A+   G ++ WG   YG+LG  + +    P  V      
Sbjct: 190 PVRVQGLDMVRLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNL 333
            ++     I+AG  +S+     G++Y WG+ +        N+    M P+ +  LSG  +
Sbjct: 250 TLVD----IAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEEI 305

Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI--------LEGM 384
             +  G  H   V +D    S+G   +G LGYG   + ++  P++V I         E  
Sbjct: 306 VQISCGGTHSVAVTSDGRMFSFGRGDHGRLGYGR--KVTTGQPEEVPIDIPPPRGRTENG 363

Query: 385 HVIS--VACGYGHSLVIV 400
           H I+  VACG  H+L +V
Sbjct: 364 HWIAKLVACGGRHTLALV 381



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 17/203 (8%)

Query: 47  PTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P R++   G+D +R +A G    H +A+  +G  + WG NE GQLG GD   R +P  V 
Sbjct: 190 PVRVQ---GLDMVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQ 244

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV-SE 162
            LS   +    AG  H+  +T++G    +G  +HG+LG G     +++ P  V+ L   E
Sbjct: 245 GLSGLTLVDIAAGGWHSTALTDNGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVQLLSGEE 304

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +   +CG   +V ++S     + + G   +G+LG+G      T     ++  +  P PR 
Sbjct: 305 IVQISCGGTHSVAVTS--DGRMFSFGRGDHGRLGYG---RKVTTGQPEEVPIDIPP-PRG 358

Query: 223 IAALAGETIVK-VACGTNHTVAV 244
                G  I K VACG  HT+A+
Sbjct: 359 RTE-NGHWIAKLVACGGRHTLAL 380


>gi|428170458|gb|EKX39383.1| hypothetical protein GUITHDRAFT_89130 [Guillardia theta CCMP2712]
          Length = 396

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/271 (29%), Positives = 125/271 (46%), Gaps = 22/271 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +R L  V +  +AAG    H VA+      +TWGR   GQLGHGD      P +V  
Sbjct: 82  PRWIRALETVKVVQIAAG--EDHSVALTDRSEVFTWGRGLHGQLGHGDVSDVWFPFLVKG 139

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVS 161
           L    IK  G G  +T  +T  G  L FG    G+LG+G +      N   P  ++ L  
Sbjct: 140 LQGKGIKSIGCGYENTFAITGTGKVLGFGSAASGKLGNGDVDGGIGGNVYLPVQLKSLAK 199

Query: 162 EVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
                A G  +F+++LS      + + G    GQLG   +     +  S+ L Y    + 
Sbjct: 200 FTIIQATGGKNFSMFLSHT--GQLYSVGYAANGQLGIPFE-----EVESLNLPYTGTMQE 252

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
               +  G  +  V+CG +H++A+   G VY+WG G    LGH   +D + P+ V + + 
Sbjct: 253 ---VSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEA 309

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           +    P   +SAG  +S+  +  G++Y WG+
Sbjct: 310 D----PCVSVSAGGYHSAAVSATGRIYTWGR 336



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 142/341 (41%), Gaps = 43/341 (12%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           Y+ G    G+LG  D+  R   T  +  L   ++K    G  H ++++  G   ++G+N 
Sbjct: 7   YSCGHGAGGRLGLNDERARTAFTGPLGTLQDVEVKSLACGGKHNLLLSRAGKVYSWGYND 66

Query: 139 HGQLGSG-SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             Q G G    ++ EP  +R L + +V   A G D +V L+  + + +   G   +GQLG
Sbjct: 67  SRQTGHGVEDLSDWEPRWIRALETVKVVQIAAGEDHSVALT--DRSEVFTWGRGLHGQLG 124

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           HG  ++                 P  +  L G+ I  + CG  +T A+   G V  +G  
Sbjct: 125 HGDVSDV--------------WFPFLVKGLQGKGIKSIGCGYENTFAITGTGKVLGFGSA 170

Query: 257 GYGRLGHREQK-----DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
             G+LG+ +       + ++P ++    +  ++      + G   S   +  GQLY  G 
Sbjct: 171 ASGKLGNGDVDGGIGGNVYLPVQLKSLAKFTIIQA----TGGKNFSMFLSHTGQLYSVGY 226

Query: 312 LKN----------NGDDWMYPKPLMDLS--GWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
             N             +  Y   + ++S  G  ++ +  G+ H   +  D    SWG   
Sbjct: 227 AANGQLGIPFEEVESLNLPYTGTMQEVSHKGVFVKYVSCGDSHSLALSEDGIVYSWGSGI 286

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              LG+G  G + +  PK V +LE    +SV+ G  HS  +
Sbjct: 287 NWALGHG--GTEDTFTPKMVAMLEADPCVSVSAGGYHSAAV 325



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           GV +++V+  C   H +A+  +G  Y+WG      LGHG       P +V+ L       
Sbjct: 257 GVFVKYVS--CGDSHSLALSEDGIVYSWGSGINWALGHGGTEDTFTPKMVAMLEADPCVS 314

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
             AG  H+  V+  G    +G N  GQLG+G   ++     V+ L + V
Sbjct: 315 VSAGGYHSAAVSATGRIYTWGRNFVGQLGTGQNIDDHSADHVQRLPTRV 363


>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan paniscus]
          Length = 4798

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 3980 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4036

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4037 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4096

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ + SV+G+ +   G   YG+
Sbjct: 4097 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-SVDGSMVWAFGDGDYGK 4155

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4156 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4201

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4202 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4257

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4258 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4291



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 137/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3932 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3988

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 3989 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4047

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4048 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4093

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4094 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4119

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V  D S + ++G   YG+LG G    
Sbjct: 4120 ----------------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTA 4163

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4164 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4192



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4219 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4276

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4277 LQGKNVRQISAGRCHSAAWT 4296



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 722

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 171/396 (43%), Gaps = 37/396 (9%)

Query: 33  VGRRKGALDGNLVSPTRLR-PLVGVDI-RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           + + K  ++  + S  +++ P +  DI   V   C + H  A+D     Y WG N   +L
Sbjct: 1   MSQSKQYVNNQVKSVNKVQTPHLISDISNIVKIVCGANHSYAIDTNFEVYAWGCNLGRKL 60

Query: 91  GHGDKI-----------QRDRPTIVSELSKYKIKKAGAGRSHTVV-VTEDGNSLAFGWNK 138
           G  D+            Q   P  V+ELS  KI     G +H+    TE      +G  +
Sbjct: 61  GLSDEYYNQIFQADIPEQIKIPVKVTELSNKKINNISTGTNHSFAWSTELNQVYCWGIGE 120

Query: 139 HGQLGSGSIRNEIEPSPVRCLVS------EVTATACGADFTVWLSSVEGASILNAGLPQY 192
           +G+LG+   ++   P     L        E++  +CG + TV   +V     +N    Q 
Sbjct: 121 YGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTV---AVIKQINVNNSQSQN 177

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
                G+ +++     + K  Y  QP   +     G      AC ++ T+A+D +G +++
Sbjct: 178 KLYVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKAC-SDFTIAIDKQGRIFS 236

Query: 253 WGFGGYGRLGHR-EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           WG GG+ RLG++ E  ++  P +++   +  ++      S GS +S+     G+LY WG+
Sbjct: 237 WGKGGFNRLGYKAEIVNQKHPLQIESLSKQQIIQ----FSLGSFHSAAITNNGRLYTWGR 292

Query: 312 LKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGY 364
             N           ++PK +  L    +  +  G  H   +  ++   SWG    G+LG 
Sbjct: 293 DSNGQLGHGQAKADIFPKEVQALQNTYIVSVACGEGHTLALSKNNELFSWGLNSSGQLGR 352

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                KSS  PKK+   E   +  +ACG  HSLV++
Sbjct: 353 ASENLKSSD-PKKISFFEDKSIKQIACGSKHSLVLL 387



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/370 (23%), Positives = 158/370 (42%), Gaps = 62/370 (16%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVE-GRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P ++  L    I  ++ G  + H  A   E  + Y WG  E G+LG+ +      P I +
Sbjct: 82  PVKVTELSNKKINNISTG--TNHSFAWSTELNQVYCWGIGEYGKLGNKESKDLQYPEIFN 139

Query: 106 ELSK-----YKIKKAGAGRSHTVVV--------TEDGNSL-AFGWNKHGQLG-----SGS 146
            L +     ++I +   G +HTV V        ++  N L  +G +   QLG     +  
Sbjct: 140 GLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNKLYVWGSSSDWQLGIDTGKTDY 199

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   +E SP     +  +  AC +DFT+ +   +   I + G   + +LG+         
Sbjct: 200 VNQPLEMSPDYWEGNVESVKAC-SDFTIAID--KQGRIFSWGKGGFNRLGY--------- 247

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
               K     Q  P  I +L+ + I++ + G+ H+ A+ + G +YTWG    G+LGH + 
Sbjct: 248 ----KAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAITNNGRLYTWGRDSNGQLGHGQA 303

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------------KLKN 314
           K +  P+ V   Q   ++     ++ G  ++   +   +L+ WG             LK+
Sbjct: 304 KADIFPKEVQALQNTYIVS----VACGEGHTLALSKNNELFSWGLNSSGQLGRASENLKS 359

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGY--GPYGQKS 371
           +      PK +      +++ +  G+ H  V   D +  SWG  QYG+LG+      Q +
Sbjct: 360 SD-----PKKISFFEDKSIKQIACGSKHSLVLLQDGTVYSWGSNQYGQLGFDQDSNAQNT 414

Query: 372 SAMPKKVDIL 381
            A  + VD++
Sbjct: 415 IASSQNVDLI 424


>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4854

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4036 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4092

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4093 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4152

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ + SV+G+ +   G   YG+
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-SVDGSMVWAFGDGDYGK 4211

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4212 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4258 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4313

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4314 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4347



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 137/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3988 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4044

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4103

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4104 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4149

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4175

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V  D S + ++G   YG+LG G    
Sbjct: 4176 ----------------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTA 4219

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4220 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4248



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4275 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4332

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4333 LQGKNVRQISAGRCHSAAWT 4352



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1 [Pan
            troglodytes]
 gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
 gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
          Length = 4861

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ + SV+G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAV-SVDGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 137/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V  D S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSVDGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
 gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
           troglodytes]
 gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
 gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
           Full=Chronic lymphocytic leukemia deletion region gene 7
           protein; Short=CLL deletion region gene 7 protein;
           AltName: Full=Regulator of chromosome condensation and
           BTB domain-containing protein 1
 gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
 gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
 gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [synthetic construct]
 gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
 gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Pan troglodytes]
          Length = 531

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Brachypodium distachyon]
          Length = 480

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 167/409 (40%), Gaps = 62/409 (15%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  D +L  P  L P +     G ++R++   C   H  AV  +G  +TWG N+ GQL
Sbjct: 34  RKGK-DRHLRIPKSLPPKLFKCRDGENLRWIDIACGREHTAAVASDGSLFTWGANDFGQL 92

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
           G G +     P  V+ +    +K    G   T  + E    DG  S +  W      GS 
Sbjct: 93  GDGTEESAKEPKKVNAIETEFVKSVSCGAHCTAAIAEPRENDGTISKSRLWVWGQNQGSD 152

Query: 146 SIR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
             R       P+ V      +   +CGA   + LS  E   +   G  +YGQLG G  +E
Sbjct: 153 YPRLFWGAFAPNTV------ILQVSCGAVHVMALS--EDGVLQAWGYNEYGQLGRGCTSE 204

Query: 203 YNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
              + + V  AY       P  +       IV+V+CG  H  A+   G VYTWG G  G+
Sbjct: 205 -GLQGARVLNAYARFLDDAPELV------KIVRVSCGEYHAAAISEHGEVYTWGLGSMGQ 257

Query: 261 LGHREQKD---EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------- 310
           LGHR  +    E +PRRV   +          +S G V+S     GG LY WG       
Sbjct: 258 LGHRSLQSGDKELIPRRVVALEGMVA----GDVSCGGVHSCAVTEGGTLYAWGGGHVGQL 313

Query: 311 ---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQYG 360
                        NG D +     + +    +R +  G+ H  +   D     WG+  YG
Sbjct: 314 GLGPQSGFFSCALNGSDMLLRNIPVLVIPSGVRLVTCGHSHTLISMKDGRIYGWGYNSYG 373

Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           +       +KS+    P  VD   G  V  +A G GHS V+ D +++ E
Sbjct: 374 QAA----NEKSTYAWYPSPVDWCVG-EVRRLAAGGGHSAVLTDASSLKE 417


>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
 gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
 gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
 gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Homo sapiens]
          Length = 531

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 132/298 (44%), Gaps = 35/298 (11%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACG 169
           K+   G   S  + VT++     FG N    LG+G  ++ + P  +  L   ++ + + G
Sbjct: 23  KVCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYG 82

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +   V LS+ +G  +   G   Y QLG+GT N+                  +    L  +
Sbjct: 83  SGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GIAPVQVCTNLLIK 128

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V      N L  + V
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-----TNCLHIKRV 183

Query: 290 --ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
             I+ G  +S      G++Y WG        L NNG+  + P  +  L    +  +  G 
Sbjct: 184 VGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGY 242

Query: 341 MHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
            H     D   + +WG   YG+LG    G K++ +     ++E   V+ + AC   H+
Sbjct: 243 AHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVVEIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|326492157|dbj|BAJ98303.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1391

 Score =  103 bits (258), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 98/398 (24%), Positives = 158/398 (39%), Gaps = 80/398 (20%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           +I F +  C   + +  D  G+ Y+ G    G+LG G DKI    PT++  L   K+ K 
Sbjct: 90  EINFTSVKCGLRYAIFQDDNGKLYSCGYGNLGELGLGKDKIYTKIPTLIEGLDYKKVSKY 149

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI---------------------------- 147
             G +H V ++ D    ++G   +G+ G+  +                            
Sbjct: 150 SCGPNHVVALSTDHRIFSWGDGNYGKQGTSGVTAVFRPHILPFTKVTASNQKIQEDGSPV 209

Query: 148 --RNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
             R   EP PV     +V   ACG DF+++ +  +G   L  G    G+LG G       
Sbjct: 210 RERQRKEPPPVDYRWIDV---ACGGDFSIF-AGEQGTFAL--GRETNGRLGVGA------ 257

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                   +E    P  I       I+ +ACG  H++A DS+GY Y+WG G  GRLGH  
Sbjct: 258 -------MFEPASIPINIGFFQKIKIMGIACGKGHSMAWDSEGYAYSWGDGTDGRLGHSI 310

Query: 266 QKD------EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD- 318
           +K       E VP+R+   ++  +L    ++S G+ ++      G++  WGK  +N  + 
Sbjct: 311 EKGFHMSKFEIVPKRITTLEKYRIL----LMSCGNSHTCALTNKGEILTWGKASSNKKEE 366

Query: 319 ---------WMYPKPLMDLSGWNLRCMDS-------GNMHH-FVGADSSCISWGHAQYGE 361
                    +  P+ L+     +    +        G  H+  +  D    +WG +    
Sbjct: 367 TFAGNYKLLYFAPRKLIVSPTGDGNTTEPVFIKVVCGPTHNAAIDKDFKLYTWGDSTENC 426

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           LGY    +     P  V     + VI V CG   + VI
Sbjct: 427 LGYP--SEDDVFSPTLVQRFSSIKVIDVGCGDNFTFVI 462



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 64/258 (24%), Positives = 103/258 (39%), Gaps = 26/258 (10%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           DG+ V   + +    VD R++   C     +    +G  +  GR   G+LG G   +   
Sbjct: 205 DGSPVRERQRKEPPPVDYRWIDVACGGDFSIFAGEQG-TFALGRETNGRLGVGAMFEPAS 263

Query: 101 -PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRNEIEPSP 155
            P  +    K KI     G+ H++    +G + ++G    G+LG     G   ++ E  P
Sbjct: 264 IPINIGFFQKIKIMGIACGKGHSMAWDSEGYAYSWGDGTDGRLGHSIEKGFHMSKFEIVP 323

Query: 156 VRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
            R    E   +   +CG   T  L++     IL  G          ++ +  T   + KL
Sbjct: 324 KRITTLEKYRILLMSCGNSHTCALTN--KGEILTWGKAS-------SNKKEETFAGNYKL 374

Query: 213 AYEAQPRPRAIAALAGE------TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
            Y A PR + I +  G+        +KV CG  H  A+D    +YTWG      LG+  +
Sbjct: 375 LYFA-PR-KLIVSPTGDGNTTEPVFIKVVCGPTHNAAIDKDFKLYTWGDSTENCLGYPSE 432

Query: 267 KDEWVPRRVDVFQRNNVL 284
            D + P  V  F    V+
Sbjct: 433 DDVFSPTLVQRFSSIKVI 450



 Score = 45.4 bits (106), Expect = 0.055,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 20/108 (18%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           DGN   P            F+   C   H  A+D + + YTWG +    LG+  +     
Sbjct: 389 DGNTTEPV-----------FIKVVCGPTHNAAIDKDFKLYTWGDSTENCLGYPSEDDVFS 437

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
           PT+V   S  K+   G G + T V+         G NKH  L S +++
Sbjct: 438 PTLVQRFSSIKVIDVGCGDNFTFVI---------GCNKHRNLPSKALK 476


>gi|260796835|ref|XP_002593410.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
 gi|229278634|gb|EEN49421.1| hypothetical protein BRAFLDRAFT_119547 [Branchiostoma floridae]
          Length = 538

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 117/252 (46%), Gaps = 30/252 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +     G  Y+WG N   QLG+G   Q   P +++  L   K+ K   G  H++ +T 
Sbjct: 93  HVLVCTDNGDLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLALTL 152

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CL-VSEVTATACGADFTVWLSSVEGASIL 185
           +G   A+G+N  GQ+GSG+  N+  P  V  CL   +VT  ACG   T  ++ ++   + 
Sbjct: 153 EGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIACGQ--TSSMALLDNGEVY 210

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
             G    GQLG G  N  N            QP P  +AAL    +V++ CG  H +A+ 
Sbjct: 211 GWGYNGNGQLGVG--NNVN------------QPNPCRVAALQQMIVVQIVCGYAHAMALT 256

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN----SSCTA 301
            +G VY WG   YG+LG   + +   P ++        L     +  G+ +    SS   
Sbjct: 257 DEGSVYAWGANSYGQLGTGNKANLVTPTKI-------ALDKGRFVEIGATHYNHVSSAIT 309

Query: 302 GGGQLYMWGKLK 313
             G++YMWG+ +
Sbjct: 310 QTGKVYMWGQCR 321



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 108/244 (44%), Gaps = 24/244 (9%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG 129
           + +  +   Y  G N    LG GD      P  +  L K KI   G G   H +V T++G
Sbjct: 42  IVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIGYGSGPHVLVCTDNG 101

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNA 187
           +  ++G N + QLG+GS    + P  +    +  +V   ACG+  ++ L ++EG  +   
Sbjct: 102 DLYSWGHNGYSQLGNGSTNQGLSPQLITTNLIGRKVVKVACGSHHSLAL-TLEG-EVFAW 159

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVKVACGTNHTVAVDS 246
           G    GQ+G GT                 Q  PR +AA  G   + ++ACG   ++A+  
Sbjct: 160 GYNNCGQVGSGTTTN--------------QATPRKVAACLGTRKVTEIACGQTSSMALLD 205

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G VY WG+ G G+LG     ++  P RV   Q+  V+     I  G  ++      G +
Sbjct: 206 NGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQ----IVCGYAHAMALTDEGSV 261

Query: 307 YMWG 310
           Y WG
Sbjct: 262 YAWG 265



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 128/306 (41%), Gaps = 36/306 (11%)

Query: 112 IKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
           IK+A   G+  +  +V+T+D +  A G N    LG G  ++ +EP  +  L  +      
Sbjct: 28  IKQACVFGSSGNEAIVITQDDDVYALGSNCSSCLGVGDAQSGLEPRKIDILCKKKIVDIG 87

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LA 227
                  L   +   + + G   Y QLG+G+ N+                 P+ I   L 
Sbjct: 88  YGSGPHVLVCTDNGDLYSWGHNGYSQLGNGSTNQ--------------GLSPQLITTNLI 133

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
           G  +VKVACG++H++A+  +G V+ WG+   G++G     ++  PR+V        +   
Sbjct: 134 GRKVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTE- 192

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP-----LMDLSGWNLRCMDS 338
             I+ G  +S      G++Y WG   N     G++   P P     L  +    + C   
Sbjct: 193 --IACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVC--- 247

Query: 339 GNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G  H     D  S  +WG   YG+LG G   + +   P K+ + +G  V   A  Y H  
Sbjct: 248 GYAHAMALTDEGSVYAWGANSYGQLGTG--NKANLVTPTKIALDKGRFVEIGATHYNHVS 305

Query: 398 VIVDRT 403
             + +T
Sbjct: 306 SAITQT 311



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 19/199 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAGA 117
           + V   C S H +A+ +EG  + WG N  GQ+G G    +  P  V+  L   K+ +   
Sbjct: 136 KVVKVACGSHHSLALTLEGEVFAWGYNNCGQVGSGTTTNQATPRKVAACLGTRKVTEIAC 195

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G++ ++ + ++G    +G+N +GQLG G+  N+  P  V  L    V    CG    + L
Sbjct: 196 GQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIVVQIVCGYAHAMAL 255

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +  EG S+   G   YGQLG G      T              P  IA   G  +   A 
Sbjct: 256 TD-EG-SVYAWGANSYGQLGTGNKANLVT--------------PTKIALDKGRFVEIGAT 299

Query: 237 GTNH-TVAVDSKGYVYTWG 254
             NH + A+   G VY WG
Sbjct: 300 HYNHVSSAITQTGKVYMWG 318



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 1/114 (0%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +P ++   +G   +     C     +A+   G  Y WG N  GQLG G+ + +  P 
Sbjct: 174 NQATPRKVAACLGTR-KVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPC 232

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            V+ L +  + +   G +H + +T++G+  A+G N +GQLG+G+  N + P+ +
Sbjct: 233 RVAALQQMIVVQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKI 286



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 4/137 (2%)

Query: 2   AELEAEKMVEEETGKEKGGELLFCGSTC-WDAVGRRKGALDGNLVSPTRLRPLVGVDIRF 60
           A L   K+ E   G+     LL  G    W   G  +  +  N+  P   R      +  
Sbjct: 183 ACLGTRKVTEIACGQTSSMALLDNGEVYGWGYNGNGQLGVGNNVNQPNPCRVAALQQMIV 242

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           V   C   H +A+  EG  Y WG N  GQLG G+K     PT ++ L K +  + GA   
Sbjct: 243 VQIVCGYAHAMALTDEGSVYAWGANSYGQLGTGNKANLVTPTKIA-LDKGRFVEIGATHY 301

Query: 121 HTV--VVTEDGNSLAFG 135
           + V   +T+ G    +G
Sbjct: 302 NHVSSAITQTGKVYMWG 318


>gi|255551398|ref|XP_002516745.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223544118|gb|EEF45643.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 393

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 31/330 (9%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   +++   +V+ L  YK++   AG  +++ + +DG    +GWN+ G 
Sbjct: 10  WGAGEDGQLGIGINEEKEWVCVVNALEPYKVRSVVAGSRNSLAICDDGKLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG     + E  PS V+ L +     A    +       +G +    G  +YGQ G    
Sbjct: 70  LGHPAETKTENIPSQVKALNNVNIVQAAIGGWHCLAVDDQGRAYAWGG-NEYGQCGE--- 125

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
            E   KD + K        P+  A      + +VA G  H+V +  +G+V+TWG      
Sbjct: 126 -EPERKDDTGKTLRRDIVIPQRCAPKL--VVRQVAAGGTHSVVLTREGHVWTWG------ 176

Query: 261 LGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
                    W P   +++ V  R   L    +I+ G+ ++      G L+ WG  +    
Sbjct: 177 -------QPWPPGDIKQISVPVRVQGLEKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQL 229

Query: 314 NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             GD      P P+  LSG  L  + +G  H   +  D     WG  ++G LG+G   + 
Sbjct: 230 GTGDTQPRSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKS 289

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           S  +P+KV++L G  ++ ++CG  HS+ + 
Sbjct: 290 SKMVPQKVNLLAGEDIVQLSCGGTHSVALT 319



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 41/277 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
           P++++ L  V+I  V A     HC+AVD +GR Y WG NE GQ G         G  ++R
Sbjct: 82  PSQVKALNNVNI--VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRR 139

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           D         K  +++  AG +H+VV+T +G+   +G         G I+    P  V+ 
Sbjct: 140 DIVIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQISVPVRVQG 195

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           L  +V   A GA   + L   E  ++   G  +YGQLG G                + QP
Sbjct: 196 L-EKVKLIAVGAFHNLALQ--EDGTLWAWGNNEYGQLGTG----------------DTQP 236

Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
           R  P  +  L+G T+V +A G  H+ A+   G VY WG G +GRLG    ++  + VP++
Sbjct: 237 RSQPIPVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQK 296

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           V++    +++     +S G  +S      G+++ +G+
Sbjct: 297 VNLLAGEDIVQ----LSCGGTHSVALTQDGRMFSFGR 329



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 80/249 (32%), Positives = 125/249 (50%), Gaps = 31/249 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++V P R  P + V  R VAAG    H V +  EG  +TWG+        GD  Q   P 
Sbjct: 140 DIVIPQRCAPKLVV--RQVAAG--GTHSVVLTREGHVWTWGQ----PWPPGDIKQISVPV 191

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
            V  L K K+   GA   H + + EDG   A+G N++GQLG+G  +   +P PV+ L  +
Sbjct: 192 RVQGLEKVKLIAVGA--FHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGL 249

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           + V   A G   T   +  +   +   G  ++G+LG G DN     D S K+       P
Sbjct: 250 TLVDIAAGGWHST---ALTDDGEVYGWGRGEHGRLGFG-DN-----DKSSKMV------P 294

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + +  LAGE IV+++CG  H+VA+   G ++++G G +GRLG+ ++     P  V     
Sbjct: 295 QKVNLLAGEDIVQLSCGGTHSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVP---- 350

Query: 281 NNVLPPEAV 289
            ++ PP+++
Sbjct: 351 TDIPPPKSL 359



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 96/374 (25%), Positives = 157/374 (41%), Gaps = 57/374 (15%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAG 116
           +R V AG  S + +A+  +G+ +TWG N+RG LGH  + + +  P+ V  L+   I +A 
Sbjct: 40  VRSVVAG--SRNSLAICDDGKLFTWGWNQRGTLGHPAETKTENIPSQVKALNNVNIVQAA 97

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
            G  H + V + G + A+G N++GQ G    R +     +R  +  V    C     V  
Sbjct: 98  IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGKTLRRDI--VIPQRCAPKLVV-- 153

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAALAG 228
                   + AG         GT +   T++  V    +  P         P  +  L  
Sbjct: 154 ------RQVAAG---------GTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGL-- 196

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           E +  +A G  H +A+   G ++ WG   YG+LG  + +    P  V       ++    
Sbjct: 197 EKVKLIAVGAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQGLSGLTLVD--- 253

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGN 340
            I+AG  +S+     G++Y WG+ +        N+    M P+ +  L+G ++  +  G 
Sbjct: 254 -IAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDIVQLSCGG 312

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI-----LEGM-----HVIS- 388
            H   +  D    S+G   +G LGYG        +    DI     L G      H I+ 
Sbjct: 313 THSVALTQDGRMFSFGRGDHGRLGYGKKVTTGQPVEVPTDIPPPKSLSGTEEAEGHWIAK 372

Query: 389 -VACGYGHSLVIVD 401
            VACG  H+L IV+
Sbjct: 373 LVACGGRHTLAIVE 386



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/205 (30%), Positives = 102/205 (49%), Gaps = 17/205 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L    ++ +A G    H +A+  +G  + WG NE GQLG GD   R +P  V  
Sbjct: 190 PVRVQGLE--KVKLIAVGAF--HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIPVQG 245

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
           LS   +    AG  H+  +T+DG    +G  +HG+LG G     +++ P  V  L  E +
Sbjct: 246 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAGEDI 305

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +CG   +V L+  +   + + G   +G+LG+G   +  T    V++  +  P P+++
Sbjct: 306 VQLSCGGTHSVALT--QDGRMFSFGRGDHGRLGYG---KKVTTGQPVEVPTDIPP-PKSL 359

Query: 224 AAL---AGETIVK-VACGTNHTVAV 244
           +      G  I K VACG  HT+A+
Sbjct: 360 SGTEEAEGHWIAKLVACGGRHTLAI 384


>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
 gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
           leucogenys]
          Length = 531

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 967

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P          ++  G G  HTV V +DG     G N  
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + G   YGQ+G  
Sbjct: 64  GQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAVYGQIGLS 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           T  EY      +++       PR I +L+   IV+VACG +H++A+     +++WG   Y
Sbjct: 120 TAEEY------IRV-------PRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K E  PR +          P A I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGLEIKKECAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
              +  D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+L  V
Sbjct: 283 VN--PRKVFELMGSIVTQIACGRQHTLAFV 310



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/368 (27%), Positives = 163/368 (44%), Gaps = 38/368 (10%)

Query: 22  LLFCGSTCWDAVGRRKGALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           +L  G+T +  +G   G +D  +V  P R    +  ++R V  GC S H V V  +G  Y
Sbjct: 1   MLCWGNTSFGQLGL--GGIDEEVVLEPRRCDFFINKNVRDV--GCGSRHTVFVLDDGTVY 56

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           T G N+ GQLGH DK +R +P  V  L    I     G +HT+ + + G   ++G   +G
Sbjct: 57  TCGCNDLGQLGH-DKSRR-KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYG 114

Query: 141 QLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           Q+G  +    I  P  ++ L   ++   ACG   ++ LS  + + I + G  QYGQLG G
Sbjct: 115 QIGLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS--KDSDIFSWGQNQYGQLGLG 172

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                        L  + +  PR I +L+G     +A G  H+ A+   G ++ WG   +
Sbjct: 173 -------------LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKF 219

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGK 311
           G+LG  ++ D  VP  +   +   ++          A+   G V +    G GQL     
Sbjct: 220 GQLGLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG---- 275

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQ 369
             N+ +  + P+ + +L G  +  +  G  H   FV +     S+G    G+LG G    
Sbjct: 276 -HNSTNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTIN 334

Query: 370 KSSAMPKK 377
           + S    K
Sbjct: 335 RKSPFTVK 342


>gi|302796691|ref|XP_002980107.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
 gi|300152334|gb|EFJ18977.1| hypothetical protein SELMODRAFT_112120 [Selaginella moellendorffii]
          Length = 1090

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 166/390 (42%), Gaps = 44/390 (11%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           ++VG   G +  + + P  L   V +D+  +A  C + H   V  +G  + WG    G+L
Sbjct: 282 ESVGSGDGGIKTDSLLPKALESAVVLDVHHIA--CGNRHAALVTKQGEVFCWGDESGGRL 339

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIR 148
           GHG  +    P +V  L+    +    G  H+  VT  G+   +G   H  G LG G+  
Sbjct: 340 GHGVDVDVAHPKLVEALATTNTEFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDI 399

Query: 149 NEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   P  V   +    V++ ACG   T  ++S     +   G   +G LGHG        
Sbjct: 400 SHWTPKRVGGPLEGIRVSSVACGVWHTALVTS--AGQLFTFGDGTFGVLGHGDKR----- 452

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGF 255
             SV L       P+ + +L G   V+VACG  HT AV            S G ++TWG 
Sbjct: 453 --SVAL-------PKEVESLKGLKTVRVACGVWHTAAVVEVMVGYSNAGGSSGKLFTWGD 503

Query: 256 GGYGRLGHREQKDEWVPRRVDV---FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           G  GRLGH +++ + VP  V     +    V     +  A ++N      G  LY  G+L
Sbjct: 504 GDKGRLGHGDKEQKLVPTCVAALVDYNFKQVACGHTLTVALTINGRVFTMGSSLY--GQL 561

Query: 313 KNNGDDWMYPKPLMDLSGWN--LRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQ 369
            +   D   P  L++   W   +  +  G  H   + A +   +WG    G LG+G    
Sbjct: 562 GDVRADGKLPG-LVEGRLWEAFVEEIACGAYHVAVLTAKTEVYTWGKGANGRLGHGDVMD 620

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +++  P  V+ L+   V SVACG G +  I
Sbjct: 621 RNT--PTLVEALKEKQVKSVACGSGFTAAI 648



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 87/192 (45%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+A+ +     +  +ACG  H   V  +G V+ WG    GRLGH    D   P+ V+   
Sbjct: 298 PKALESAVVLDVHHIACGNRHAALVTKQGEVFCWGDESGGRLGHGVDVDVAHPKLVEALA 357

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N       ++ G  +S      G L+ WG       L  +G+D   W   +    L G
Sbjct: 358 TTNT----EFVACGEYHSCAVTLSGDLFTWGDGTHSYGLLGHGNDISHWTPKRVGGPLEG 413

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H   V +     ++G   +G LG+G   ++S A+PK+V+ L+G+  + V
Sbjct: 414 IRVSSVACGVWHTALVTSAGQLFTFGDGTFGVLGHG--DKRSVALPKEVESLKGLKTVRV 471

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 472 ACGVWHTAAVVE 483


>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
          Length = 1042

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/332 (27%), Positives = 145/332 (43%), Gaps = 34/332 (10%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + WG    G+LG G  ++     P  +       + KA  G +HT+ +T+DG   + G N
Sbjct: 2   FGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSN 61

Query: 138 KHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG    R    P  V  L    +   ACG   ++ LS      + + G   YGQLG
Sbjct: 62  DYGQLGHDQPRK--RPQLVSGLDAYSIINVACGEMHSLALS--RWGEVFSWGSDNYGQLG 117

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           H             +L    Q  P+ I +LA   +V++A G  H+VA+ + G ++ WG  
Sbjct: 118 H-------------QLGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVWGAN 164

Query: 257 GYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--- 312
            +G+LG       E  P  V          P A+I+ G+ ++   +  G ++ WGK    
Sbjct: 165 DFGQLGLGTITPYESTPTTVCSLSG----IPFALIACGANHTFAVSKSGAVFGWGKNING 220

Query: 313 ---KNNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYG 368
               N+     +P  L  L    +R +  G+    F+  D    S G   YG+LG+G  G
Sbjct: 221 QLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHG--G 278

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +  +P++V  L G  +  ++CG  HSL  V
Sbjct: 279 TSNEILPRQVLELMGSTITQISCGRQHSLAFV 310



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 130/284 (45%), Gaps = 33/284 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H + +  +G+ Y+ G N+ GQLGH     R RP +VS L  Y I     G  H++ ++  
Sbjct: 45  HTLFLTKDGKVYSCGSNDYGQLGHDQP--RKRPQLVSGLDAYSIINVACGEMHSLALSRW 102

Query: 129 GNSLAFGWNKHGQLGS---GSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASI 184
           G   ++G + +GQLG    G++  +I P  ++ L   +V   A G   +V L++     I
Sbjct: 103 GEVFSWGSDNYGQLGHQLGGTL--QIVPKLIKSLAKYQVVQIAAGQRHSVALTN--AGEI 158

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
              G   +GQLG GT   Y +              P  + +L+G     +ACG NHT AV
Sbjct: 159 FVWGANDFGQLGLGTITPYEST-------------PTTVCSLSGIPFALIACGANHTFAV 205

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
              G V+ WG    G+LG  +   +  P ++   + + V      IS G   S+     G
Sbjct: 206 SKSGAVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNSRV----RFISCGDEFSTFLTLDG 261

Query: 305 QLY-----MWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++     M+G+L + G  + + P+ +++L G  +  +  G  H
Sbjct: 262 GVFSCGAGMYGQLGHGGTSNEILPRQVLELMGSTITQISCGRQH 305



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 128/261 (49%), Gaps = 27/261 (10%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNL-VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           GE+   GS  +  +G + G   G L + P  ++ L    +  +AAG    H VA+   G 
Sbjct: 103 GEVFSWGSDNYGQLGHQLG---GTLQIVPKLIKSLAKYQVVQIAAG--QRHSVALTNAGE 157

Query: 79  CYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + WG N+ GQLG G     +  PT V  LS         G +HT  V++ G    +G N
Sbjct: 158 IFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFALIACGANHTFAVSKSGAVFGWGKN 217

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG     ++  P+ +R L  S V   +CG +F+ +L+   G     AG+  YGQLG
Sbjct: 218 INGQLGLNDTVSKKFPTQLRTLRNSRVRFISCGDEFSTFLTLDGGVFSCGAGM--YGQLG 275

Query: 197 HG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWG 254
           HG T NE                 PR +  L G TI +++CG  H++A V S+G VY++G
Sbjct: 276 HGGTSNEI---------------LPRQVLELMGSTITQISCGRQHSLAFVPSRGRVYSYG 320

Query: 255 FGGYGRLGHREQKDEWVPRRV 275
            GG G+LG R+  +   P+ V
Sbjct: 321 LGGAGQLGLRKPSNASTPQVV 341



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 123/264 (46%), Gaps = 32/264 (12%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVE 76
           K G++  CGS  +  +G  +      LVS        G+D    +   C   H +A+   
Sbjct: 51  KDGKVYSCGSNDYGQLGHDQPRKRPQLVS--------GLDAYSIINVACGEMHSLALSRW 102

Query: 77  GRCYTWGRNERGQLGH--GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           G  ++WG +  GQLGH  G  +Q   P ++  L+KY++ +  AG+ H+V +T  G    +
Sbjct: 103 GEVFSWGSDNYGQLGHQLGGTLQI-VPKLIKSLAKYQVVQIAAGQRHSVALTNAGEIFVW 161

Query: 135 GWNKHGQLGSGSIR-NEIEPSPVRCLVSEV--TATACGADFTVWLSSVEGASILNAGLPQ 191
           G N  GQLG G+I   E  P+ V C +S +     ACGA+ T  +S  +  ++   G   
Sbjct: 162 GANDFGQLGLGTITPYESTPTTV-CSLSGIPFALIACGANHTFAVS--KSGAVFGWGKNI 218

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            GQLG          + +V   +  Q R      L    +  ++CG   +  +   G V+
Sbjct: 219 NGQLG---------LNDTVSKKFPTQLR-----TLRNSRVRFISCGDEFSTFLTLDGGVF 264

Query: 252 TWGFGGYGRLGHREQKDEWVPRRV 275
           + G G YG+LGH    +E +PR+V
Sbjct: 265 SCGAGMYGQLGHGGTSNEILPRQV 288



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 71/189 (37%), Gaps = 57/189 (30%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+A+     ++++K A G NHT+ +   G VY+ G   YG+LGH +      PR+     
Sbjct: 25  PKALDWFEAKSVMKAALGANHTLFLTKDGKVYSCGSNDYGQLGHDQ------PRK----- 73

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
                                                     P+ +  L  +++  +  G
Sbjct: 74  -----------------------------------------RPQLVSGLDAYSIINVACG 92

Query: 340 NMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
            MH    +      SWG   YG+LG+   G     +PK +  L    V+ +A G  HS+ 
Sbjct: 93  EMHSLALSRWGEVFSWGSDNYGQLGHQ-LGGTLQIVPKLIKSLAKYQVVQIAAGQRHSVA 151

Query: 399 IVDRTNVGE 407
           +   TN GE
Sbjct: 152 L---TNAGE 157


>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
          Length = 2770

 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 96/340 (28%), Positives = 153/340 (45%), Gaps = 44/340 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  + WG N  G+LG G  I R  P  VS L++     A  G  H++ +  D
Sbjct: 279 HNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGLTEVSAISAAFG--HSMALKSD 336

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G    +G+N  GQLG+ SI   + P  V   V+ ++A   G D+++ + S    ++   G
Sbjct: 337 GTLWTWGYNNRGQLGNNSITQSLVPVQVLTGVASISA---GYDYSLAVKS--DGTVWAWG 391

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN--HTVAVDS 246
              YGQ G+ +     T DS V         P  ++ L G T +      N  H++A+ S
Sbjct: 392 RNYYGQFGNNS-----TIDSLV---------PIQVSGLTGVTSISATSSNNYSHSLALKS 437

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G V+ WG+   G+LG+       VP  V       V+     ISAGS +S      G  
Sbjct: 438 DGTVWGWGYNSTGQLGNNSATQSLVP--VQALGLTGVVS----ISAGSNHSMALKSDGTA 491

Query: 307 YMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
           ++W     G+L NN     + P  +  LSG  +  + +GN H   + +D +  +WG    
Sbjct: 492 WIWGGNSDGQLGNNSTAQSLVPVQVPGLSG--VSAISAGNYHSMALKSDGTVWAWGRNSS 549

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG       ++     + +L G    SV+ G  HS+ +
Sbjct: 550 GQLG----NNSTTVSLVPIQVLTG--TTSVSAGTYHSMAL 583



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 99/372 (26%), Positives = 159/372 (42%), Gaps = 48/372 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L GV      +     H +A+  +G  + WG N  GQLG+    Q   P  V  
Sbjct: 409 PIQVSGLTGVTSISATSSNNYSHSLALKSDGTVWGWGYNSTGQLGNNSATQSLVP--VQA 466

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L    +    AG +H++ +  DG +  +G N  GQLG+ S    + P  V  L S V+A 
Sbjct: 467 LGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPGL-SGVSAI 525

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           + G   ++ L S    ++   G    GQLG+ +        ++V L          I  L
Sbjct: 526 SAGNYHSMALKS--DGTVWAWGRNSSGQLGNNS--------TTVSLV--------PIQVL 567

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
            G T   V+ GT H++A+ S G V+ WG   Y ++      D+ VP +  +    +    
Sbjct: 568 TGTT--SVSAGTYHSMALKSDGAVWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFND 625

Query: 287 EAVISAGSVNSSCTAGGGQ------------LYMWGK-----LKN-NGDDWMYPKPLMDL 328
             V S+  + S  T+ GG             ++ WG      L N  G+  +   P+ DL
Sbjct: 626 GFVPSSQEIKSIATSSGGSYGYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPVRDL 685

Query: 329 SGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
           +G  +  + +G  H   + +D +  +WG   YG LG       +S++P +V  L G  V 
Sbjct: 686 TG--VEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNN--STVTSSIPVQVSGLTG--VS 739

Query: 388 SVACGYGHSLVI 399
           SV  G  HS+ +
Sbjct: 740 SVKAGRLHSMAL 751



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 85/328 (25%), Positives = 145/328 (44%), Gaps = 42/328 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N + P ++  L  V     A G    H +A+  +G  +TWG N RGQLG+    Q   P 
Sbjct: 307 NRIVPVQVSGLTEVSAISAAFG----HSMALKSDGTLWTWGYNNRGQLGNNSITQSLVPV 362

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--V 160
            V       +    AG  +++ V  DG   A+G N +GQ G+ S  + + P  V  L  V
Sbjct: 363 QVLT----GVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTGV 418

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           + ++AT+   +++  L+     ++   G    GQLG+      N+   S+          
Sbjct: 419 TSISATSSN-NYSHSLALKSDGTVWGWGYNSTGQLGN------NSATQSLV--------- 462

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
             + AL    +V ++ G+NH++A+ S G  + WG    G+LG+       VP +V     
Sbjct: 463 -PVQALGLTGVVSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVP---- 517

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRC 335
              L   + ISAG+ +S      G ++ WG+     L NN    +   P+  L+G     
Sbjct: 518 --GLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTT-VSLVPIQVLTG--TTS 572

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGEL 362
           + +G  H   + +D +   WG+ +Y ++
Sbjct: 573 VSAGTYHSMALKSDGAVWGWGNNEYKKI 600



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 160/366 (43%), Gaps = 40/366 (10%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +   L GV    V+    S H +A+  +G  + WG N  GQLG+    Q   P  V  
Sbjct: 463 PVQALGLTGV----VSISAGSNHSMALKSDGTAWIWGGNSDGQLGNNSTAQSLVPVQVPG 518

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           LS   +    AG  H++ +  DG   A+G N  GQLG+ S    + P  V   ++  T+ 
Sbjct: 519 LSG--VSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTVSLVPIQV---LTGTTSV 573

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ------PRP 220
           + G   ++ L S +GA +   G  +Y ++   T+ +      +   AY +       P  
Sbjct: 574 SAGTYHSMALKS-DGA-VWGWGNNEYKKIISNTNLDQLVPVKTAMNAYISDFNDGFVPSS 631

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + I ++A  +         +++A+ S   V+ WG+GG G LG+   +   V   V     
Sbjct: 632 QEIKSIATSS----GGSYGYSLALKSDKTVWAWGYGGSGVLGNGTGEQMLVGYPV----- 682

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGD-DWMYPKPLMDLSGWNLR 334
              L     ISAG  +S      G  + WG      L NN       P  +  L+G  + 
Sbjct: 683 -RDLTGVEQISAGEGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTG--VS 739

Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            + +G +H   + +D +  +WG+   G+LG G   Q+   +P +V  LE   VI+++ G 
Sbjct: 740 SVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQR--LVPVQVSGLE--DVIAISAGD 795

Query: 394 GHSLVI 399
            HS+VI
Sbjct: 796 YHSMVI 801



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 87/319 (27%), Positives = 137/319 (42%), Gaps = 34/319 (10%)

Query: 50  LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
           +R L GV+   ++AG    H +A+  +G  + WG N  G LG+   +    P  VS L+ 
Sbjct: 682 VRDLTGVEQ--ISAG--EGHSLALRSDGTAWAWGDNAYGMLGNNSTVTSSIPVQVSGLTG 737

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG 169
             +    AGR H++ +  DG   A+G+N  GQLG GS    + P  V  L  +V A + G
Sbjct: 738 --VSSVKAGRLHSMALKSDGTVWAWGYNTEGQLGDGSTTQRLVPVQVSGL-EDVIAISAG 794

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
              ++ + S    ++   G    GQLG+ +     T  S V         P  +  L G 
Sbjct: 795 DYHSMVIKS--DGTVWAWGRNSNGQLGNNS-----TTGSLV---------PVQVPGLTG- 837

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            +  ++ GTN + AV S G    WG   YG+L         +P  V V +   V     V
Sbjct: 838 -VALISAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIP--VQVSEPVGVGALSMV 894

Query: 290 ISAGS---VNSSCTAGGGQLYMWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHF- 344
           ++      +    T  G     +G + NN   D   P   + L+G  +  + +G  H   
Sbjct: 895 VANSHSLILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTLGLAG--VVSISAGLYHSMA 952

Query: 345 VGADSSCISWGHAQYGELG 363
           + +D +   WG+  YG+LG
Sbjct: 953 LKSDGTIWGWGYNGYGQLG 971



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 21/216 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  ++AG    H + +  +G  + WGRN  GQLG+        P  V  L+   +  AG
Sbjct: 787 DVIAISAG--DYHSMVIKSDGTVWAWGRNSNGQLGNNSTTGSLVPVQVPGLTGVALISAG 844

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
              S    V  DG +LA+G N +GQL  GS    + P  V   V     +   A+    +
Sbjct: 845 TNTS--AAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSLI 902

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
             ++G ++   G   YG +G+ +       DS V         P     LAG  +V ++ 
Sbjct: 903 LKLDG-TVWGCGRNDYGPIGNNS-----ITDSKV---------PVQTLGLAG--VVSISA 945

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           G  H++A+ S G ++ WG+ GYG+LG         P
Sbjct: 946 GLYHSMALKSDGTIWGWGYNGYGQLGDNSTTSRLAP 981



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 36/296 (12%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           K  +  AG  H + +  DG   A+G+N +G+LG GS  N I P  V  L +EV+A +   
Sbjct: 269 KYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQVSGL-TEVSAISAAF 327

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ L S    ++   G    GQLG+      N+   S+            +  L G  
Sbjct: 328 GHSMALKS--DGTLWTWGYNNRGQLGN------NSITQSLV----------PVQVLTG-- 367

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +  ++ G ++++AV S G V+ WG   YG+ G+    D  VP  + V     V    A  
Sbjct: 368 VASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTIDSLVP--IQVSGLTGVTSISATS 425

Query: 291 SAGSVNSSCTAGGGQLYMW-----GKLKNN-GDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
           S    +S      G ++ W     G+L NN     + P   + L+G  +  + +G+ H  
Sbjct: 426 SNNYSHSLALKSDGTVWGWGYNSTGQLGNNSATQSLVPVQALGLTG--VVSISAGSNHSM 483

Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            + +D +   WG    G+LG     Q  S +P +V  L G+  IS   G  HS+ +
Sbjct: 484 ALKSDGTAWIWGGNSDGQLGNNSTAQ--SLVPVQVPGLSGVSAISA--GNYHSMAL 535



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 52/179 (29%), Positives = 79/179 (44%), Gaps = 19/179 (10%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           E   +V  G  H +A+ S G V+ WG+  YGRLG     +  VP +V      + L   +
Sbjct: 268 EKYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGSTINRIVPVQV------SGLTEVS 321

Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
            ISA   +S      G L+ W     G+L NN        P+  L+G  +  + +G  + 
Sbjct: 322 AISAAFGHSMALKSDGTLWTWGYNNRGQLGNNSITQSL-VPVQVLTG--VASISAGYDYS 378

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG--YGHSLVI 399
             V +D +  +WG   YG+  +G      S +P +V  L G+  IS      Y HSL +
Sbjct: 379 LAVKSDGTVWAWGRNYYGQ--FGNNSTIDSLVPIQVSGLTGVTSISATSSNNYSHSLAL 435


>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
          Length = 675

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/217 (34%), Positives = 110/217 (50%), Gaps = 11/217 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G L  ++ +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 64  KGGELFAWGQNLHGQLG--IGRLFASIPTPQLVEHLSGVPLVQISAG--KAHSMALSMSG 119

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G     + P++V  L   K++    G SHT ++TEDG    FG  
Sbjct: 120 NIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLTEDGQVFTFGAG 179

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           KHGQLG  S +NE+ P  V  L    VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 180 KHGQLGHNSTQNELRPRLVTELTGIRVTQVACGRRHTLAYVSDLG-KVFSFGSGKEGQLG 238

Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
           + GT N+         S+  L +E++   + +  +AG
Sbjct: 239 NGGTHNQLIPLPMKLPSNEDLKFESRTSEKELIMIAG 275



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 121/259 (46%), Gaps = 25/259 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P +V  LS   + +  AG+
Sbjct: 50  IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLVQISAGK 109

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G    E  PS V  L S+ V   ACG   T  L+ 
Sbjct: 110 AHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKVEFLACGGSHTALLT- 168

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            E   +   G  ++GQLGH  T NE                RPR +  L G  + +VACG
Sbjct: 169 -EDGQVFTFGAGKHGQLGHNSTQNEL---------------RPRLVTELTGIRVTQVACG 212

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             HT+A V   G V+++G G  G+LG+    ++ +P  + +   N  L  E+  S   + 
Sbjct: 213 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEDLKFESRTSEKEL- 270

Query: 297 SSCTAGGGQ-LYMWGKLKN 314
               AGG Q + +W   KN
Sbjct: 271 -IMIAGGNQSILLWMGKKN 288



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 61/280 (21%), Positives = 118/280 (42%), Gaps = 42/280 (15%)

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTAT 166
           K KI     G  H ++++ DG    + ++             IE +  +C++ E  +   
Sbjct: 6   KMKIHSVDQGAEHMLILSSDGKPFEYNYS-------------IEHARFQCILQEKSIIQI 52

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
            CG   ++ LS  +G  +   G   +GQLG G               + + P P+ +  L
Sbjct: 53  TCGDYHSLALS--KGGELFAWGQNLHGQLGIGR-------------LFASIPTPQLVEHL 97

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
           +G  +V+++ G  H++A+   G +Y+WG    G+LG      E  P  V+      V   
Sbjct: 98  SGVPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV--- 154

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN 340
              ++ G  +++     GQ++ +G  K      N+  + + P+ + +L+G  +  +  G 
Sbjct: 155 -EFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTGIRVTQVACGR 213

Query: 341 MHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
            H   +V       S+G  + G+LG G    +   +P K+
Sbjct: 214 RHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 253



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 76/170 (44%), Gaps = 16/170 (9%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N HGQLG G +   I    +   +S V   
Sbjct: 44  LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLSGVPLV 103

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAA 225
              A     ++     +I + G    GQLG G TD E                 P  + A
Sbjct: 104 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGE---------------EFPSLVEA 148

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           L  + +  +ACG +HT  +   G V+T+G G +G+LGH   ++E  PR V
Sbjct: 149 LDSQKVEFLACGGSHTALLTEDGQVFTFGAGKHGQLGHNSTQNELRPRLV 198



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R    L  ++I+++ CG  H++A+   G ++ WG   +G+LG  R       P+ V+   
Sbjct: 39  RFQCILQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGRLFASIPTPQLVEHLS 98

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P   ISAG  +S   +  G +Y WG+         + D   +P  +  L    +
Sbjct: 99  G----VPLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQKV 154

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P+ V  L G+ V  VACG
Sbjct: 155 EFLACGGSHTALLTEDGQVFTFGAGKHGQLGHN--STQNELRPRLVTELTGIRVTQVACG 212

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 213 RRHTLAYV 220


>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 531

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGVAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   K+ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL    V
Sbjct: 124 NLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT+D     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSANEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GV 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKKVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHFKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLNPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
            protein [Acanthamoeba castellanii str. Neff]
          Length = 1563

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 123/262 (46%), Gaps = 24/262 (9%)

Query: 57   DIRFVAAGCVS---C---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
             + F  + CV    C   H +A    G  Y WG    GQLG GD+     P  +  L K 
Sbjct: 922  QVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKM 981

Query: 111  KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
             + +  AG +HT+VV + G  + FG  + GQLG+G  ++ + P+ ++ + S V A ACG 
Sbjct: 982  HVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPSIVQA-ACGY 1040

Query: 171  DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
              T  L+  E   +   G    GQLGH  DN  N + +           P+ +  L G+ 
Sbjct: 1041 CHTALLT--EAGEVYTCGSAMSGQLGHA-DNLQNDRLA-----------PKMVEGLNGKR 1086

Query: 231  IVKVACGTNHTVAVDSKGYVYTWG--FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE- 287
            I  +ACG+ HT+A+     VYTWG   G       R+++   + +RV       ++    
Sbjct: 1087 IRFIACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRI 1146

Query: 288  AVISAGSVNSSCTAGGGQLYMW 309
            +++S G  +S  T   G++Y+W
Sbjct: 1147 SLVSCGHAHSVATTMDGEVYVW 1168



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 115/261 (44%), Gaps = 30/261 (11%)

Query: 66   VSC---HCVAVDVEGRCYTWGRNERGQLGHGDK--IQRDRPTIVSELSKYKIKKAGAGRS 120
            VSC   HC A+   G  YTWGRN  G+LGHGDK  + +  P  V       +K+   G  
Sbjct: 880  VSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCVKEVVCGGE 939

Query: 121  HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
            HT+  TE G+   +G  + GQLG G       P P++ L    VT  A G   T+ +  +
Sbjct: 940  HTLARTESGSVYGWGNGRIGQLGLGDRTLHWLPVPIKTLRKMHVTQLAAGYAHTIVV--L 997

Query: 180  EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
            +   ++  G  + GQLG G       KD  V    +A P           +IV+ ACG  
Sbjct: 998  KSGEVMVFGGGEVGQLGTGM-----RKDLLVPTKLQAMP-----------SIVQAACGYC 1041

Query: 240  HTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            HT  +   G VYT G    G+LGH +  Q D   P+ V+      +      I+ GS ++
Sbjct: 1042 HTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRI----RFIACGSFHT 1097

Query: 298  SCTAGGGQLYMWGKLKNNGDD 318
                    +Y WG ++    D
Sbjct: 1098 IAITDLDNVYTWGGVQGTDSD 1118



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/264 (27%), Positives = 119/264 (45%), Gaps = 24/264 (9%)

Query: 18   KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
            K GE++  G      VG+    +  +L+ PT+L+ +  +    V A C  CH   +   G
Sbjct: 998  KSGEVMVFGG---GEVGQLGTGMRKDLLVPTKLQAMPSI----VQAACGYCHTALLTEAG 1050

Query: 78   RCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
              YT G    GQLGH D +Q DR  P +V  L+  +I+    G  HT+ +T+  N   +G
Sbjct: 1051 EVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRFIACGSFHTIAITDLDNVYTWG 1110

Query: 136  WNKHGQLGSGSIRNE--------IEPSPVRCLV-SEVTATACGADFTVWLSSVEGASIL- 185
                G    G++R E        + PS V+ L+   ++  +CG   +V  ++++G   + 
Sbjct: 1111 -GVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLVSCGHAHSV-ATTMDGEVYVW 1168

Query: 186  -NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
             + G  Q   L  G+     +  +   L   A P  +   A +   +   A G   T+ V
Sbjct: 1169 SSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDGQ--DAKSKPVVKHAAAGEEFTLVV 1226

Query: 245  DSKGYVYTWGFGGYGRLGHREQKD 268
               G +Y+WG G +G+LG  +Q D
Sbjct: 1227 TENGLLYSWGSGAFGQLGLGDQGD 1250



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 133/308 (43%), Gaps = 39/308 (12%)

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
            +S  ++     G +H   +TE+G+   +G N  G+LG G  S   ++ P  V    S+ V
Sbjct: 872  VSMRQVVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCV 931

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG + T  L+  E  S+   G  + GQLG G        D ++         P  I
Sbjct: 932  KEVVCGGEHT--LARTESGSVYGWGNGRIGQLGLG--------DRTLHWL------PVPI 975

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
              L    + ++A G  HT+ V   G V  +G G  G+LG   +KD  VP ++        
Sbjct: 976  KTLRKMHVTQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKL------QA 1029

Query: 284  LPPEAVISAGSVNSSCTAGGGQLY-----MWGKL---KNNGDDWMYPKPLMDLSGWNLRC 335
            +P     + G  +++     G++Y     M G+L    N  +D + PK +  L+G  +R 
Sbjct: 1030 MPSIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKRIRF 1089

Query: 336  MDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDI-----LEGMHVISV 389
            +  G+ H     D  +  +WG  Q  +       ++ +A+ K+V       L G  +  V
Sbjct: 1090 IACGSFHTIAITDLDNVYTWGGVQGTDSDGAMRQERKAAILKRVTPSIVKGLMGKRISLV 1149

Query: 390  ACGYGHSL 397
            +CG+ HS+
Sbjct: 1150 SCGHAHSV 1157



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 19/181 (10%)

Query: 231  IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEA 288
            +V V+CG NH  A+   G+VYTWG  G G LGH ++    +  P++V  F+   V   + 
Sbjct: 877  VVNVSCGWNHCAALTENGHVYTWGRNGSGELGHGDKSGVPQLHPKQVIFFKSKCV---KE 933

Query: 289  VISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNM 341
            V+  G  ++      G +Y WG        L +    W+ P P+  L   ++  + +G  
Sbjct: 934  VVCGGE-HTLARTESGSVYGWGNGRIGQLGLGDRTLHWL-PVPIKTLRKMHVTQLAAGYA 991

Query: 342  HHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            H  V   S   + +G  + G+LG G   +K   +P K+  +    ++  ACGY H+ ++ 
Sbjct: 992  HTIVVLKSGEVMVFGGGEVGQLGTG--MRKDLLVPTKLQAMPS--IVQAACGYCHTALLT 1047

Query: 401  D 401
            +
Sbjct: 1048 E 1048



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 110/260 (42%), Gaps = 29/260 (11%)

Query: 155  PVRCLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
            P   LVS  +V   +CG +    L+  E   +   G    G+LGHG  +           
Sbjct: 867  PFGGLVSMRQVVNVSCGWNHCAALT--ENGHVYTWGRNGSGELGHGDKSGV--------- 915

Query: 213  AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                Q  P+ +     + + +V CG  HT+A    G VY WG G  G+LG  ++   W+P
Sbjct: 916  ---PQLHPKQVIFFKSKCVKEVVCGGEHTLARTESGSVYGWGNGRIGQLGLGDRTLHWLP 972

Query: 273  RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNG----DDWMYPKPLM 326
              +   ++ +V      ++AG  ++      G++ ++G  ++   G     D + P  L 
Sbjct: 973  VPIKTLRKMHV----TQLAAGYAHTIVVLKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQ 1028

Query: 327  DLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
             +   ++     G  H  +  ++    + G A  G+LG+    Q     PK V+ L G  
Sbjct: 1029 AMP--SIVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQNDRLAPKMVEGLNGKR 1086

Query: 386  VISVACGYGHSLVIVDRTNV 405
            +  +ACG  H++ I D  NV
Sbjct: 1087 IRFIACGSFHTIAITDLDNV 1106


>gi|225424889|ref|XP_002269566.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 400

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 177/426 (41%), Gaps = 73/426 (17%)

Query: 12  EETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAG------C 65
           EE  ++KGGE+       W       G L    +    L  L+ +  RF +AG      C
Sbjct: 2   EENERDKGGEV-----EIWSWGAGTDGQLGTTRLEDEHLPQLLDLP-RFSSAGPISLLAC 55

Query: 66  VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
              H +A+  +G+  TWGR   GQLGHGD +   +P  V  L  + +    AG SH+  V
Sbjct: 56  GGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFV 115

Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASI 184
           ++ G     G    GQLG G  ++   P  V    S+ V   ACG   ++ L  ++G  +
Sbjct: 116 SDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVL--LKGDQV 173

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
              G  + GQLG   D   NT+  SV         P+A   L G  I+ +    +H+ A+
Sbjct: 174 YGFGSGKRGQLGVSMD---NTRSISV---------PQATVGLEGVEIISIDANGDHSAAL 221

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSSCTA 301
            + G++YTWG  G+G        D   PR          LP       ++ G  +     
Sbjct: 222 SANGHLYTWGR-GFG-----STSDVHCPR---------CLPSSLCFTQVALGWNHMLVLT 266

Query: 302 GGGQLYMWGKLKNN--GD-------------DWMYPKP----------LMDLSGWNLRCM 336
           GGG+++M G  ++   GD             +     P          +  L G N+  +
Sbjct: 267 GGGEVFMLGGNRHGVLGDPQKGSQVKHLSVIEVFLHGPEESREENLEKVQGLDGLNVVQI 326

Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYG-PYGQKSSAMPKKVDILEGMH-VISVACGY 393
            +G  H  +  ++  I +WG  ++G+LG G  Y Q S    +    L G H +I V CG 
Sbjct: 327 AAGAEHSALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGS 386

Query: 394 GHSLVI 399
           G +  I
Sbjct: 387 GFTFAI 392



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 10/163 (6%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           +++WG G  G+LG    +DE +P+ +D+  R +   P ++++ G  +       G++  W
Sbjct: 14  IWSWGAGTDGQLGTTRLEDEHLPQLLDL-PRFSSAGPISLLACGGAHVLALTTDGKVVTW 72

Query: 310 GKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
           G+  +    +GD    + PK +  L  + +  + +G  H    +D+ C+ + G   +G+L
Sbjct: 73  GRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQL 132

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+G    KS   P KV   +  HV  +ACG  HSLV++    V
Sbjct: 133 GHGDC--KSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGDQV 173



 Score = 43.1 bits (100), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LV 160
           V  L    + +  AG  H+ +VTE+     +GW +HGQLG G+  ++I P  VR    L 
Sbjct: 315 VQGLDGLNVVQIAAGAEHSALVTENRVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLP 374

Query: 161 SEVTATA--CGADFTVWLSSV 179
            + T     CG+ FT  + +V
Sbjct: 375 GQHTMIKVYCGSGFTFAIKAV 395


>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii ME49]
 gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii VEG]
          Length = 1015

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 126/298 (42%), Gaps = 48/298 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            + SP  +  L  ++   V+AG +    VA    G  Y WG N  GQLG GD+     P 
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHS--GELYMWGANSEGQLGTGDRRDASVPR 177

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------------SGSI 147
           +V  L    +K     + HTV   +DG++ A+G   +G+LG               S + 
Sbjct: 178 LVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 237

Query: 148 RNEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVEG--ASILNAGLPQYGQ 194
               EP    C V             +   ACG   + +L   E    S+   GL   G+
Sbjct: 238 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGR 297

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGHG + + +               P A+ AL    I  +ACG +HT  V S G +YTWG
Sbjct: 298 LGHGDEEDRHL--------------PTAVHALENVNITAIACGAHHTACVTSAGTLYTWG 343

Query: 255 FGGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              +G+LG    +  + +P+ V    RN  +     ++ GS +S+C    G+LY WG+
Sbjct: 344 GAAFGKLGLGSTRGSQLLPKHVSGPLRNKAV---VSVALGSQHSACVTTDGELYTWGQ 398



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 46/245 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD------ 99
           P  ++ L G  ++ VA  C   H V    +G  Y WG    G+LG HG  I         
Sbjct: 176 PRLVKALHGKVVKAVA--CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVF 233

Query: 100 ------------------RPTIVSELSKYKIKKAGAGRSHTV---VVTEDGNSL-AFGWN 137
                              P ++  L  Y I     G  H+    +  +D  SL   G  
Sbjct: 234 SPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLG 293

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +G+LG G   +   P+ V  L +  +TA ACGA  T  ++S    ++   G   +G+LG
Sbjct: 294 LNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSA--GTLYTWGGAAFGKLG 351

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            G+     T+ S +   + + P       L  + +V VA G+ H+  V + G +YTWG G
Sbjct: 352 LGS-----TRGSQLLPKHVSGP-------LRNKAVVSVALGSQHSACVTTDGELYTWGQG 399

Query: 257 GYGRL 261
             G L
Sbjct: 400 RRGNL 404



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 88/228 (38%), Gaps = 36/228 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC--YTWGRNERGQLGHGDKIQRDRPTI 103
           +P  L  L G  I  VA G      + +  + R   +T G    G+LGHGD+  R  PT 
Sbjct: 252 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 311

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSE 162
           V  L    I     G  HT  VT  G    +G    G+LG GS R +++ P  V   +  
Sbjct: 312 VHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRN 371

Query: 163 VTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDN-------------------- 201
                  A  +V L S   A +   G L  +GQ   G                       
Sbjct: 372 K------AVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTSFA 425

Query: 202 EYNTKDSSVKLAY-----EAQP-RPRAIAALAGETIVKVACGTNHTVA 243
           E  T  +S K        E  P RP  + AL G+ +V+++C +  TVA
Sbjct: 426 ETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVA 473



 Score = 45.8 bits (107), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 42/223 (18%)

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           E    PR + AL      +V+ G      V   G +Y WG    G+LG  +++D  VPR 
Sbjct: 119 EEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRL 178

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------------------N 315
           V       V      ++    ++ C    G  Y WG   N                   +
Sbjct: 179 VKALHGKVV----KAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFS 234

Query: 316 GDDWMYPKPLM------------DLSGWNLRCMDSGNMHH-FVGA----DSSCISWGHAQ 358
                 P+PL              L G+ +  +  G  H  F+G      +S  + G   
Sbjct: 235 PATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL 294

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G LG+G   ++   +P  V  LE +++ ++ACG  H+  +  
Sbjct: 295 NGRLGHG--DEEDRHLPTAVHALENVNITAIACGAHHTACVTS 335



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 66/176 (37%), Gaps = 39/176 (22%)

Query: 265 EQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD-- 317
           E  +E   PR VD  +  N       +SAG +  +  A  G+LYMWG         GD  
Sbjct: 116 ETSEEMASPRLVDALKNIN----SERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRR 171

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSA--- 373
           D   P+ +  L G  ++ +     H     D  S  +WG A  G LG       SSA   
Sbjct: 172 DASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLG 231

Query: 374 --------------------MPKKVDILEGMHVISVACGYGHSLVI----VDRTNV 405
                                P+ ++ L G  +  VACG  HS  +     DRT++
Sbjct: 232 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSL 287


>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
          Length = 345

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLSGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  LS  KIK    G   H ++ TEDG   A+G N 
Sbjct: 44  FVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+    I P  V    L+ +V   ACG+  ++ L++     +   G    GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            G+                 QP PR +   L  + +V +ACG   ++AV   G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            G G+LG     ++  P RV       V      I  G  ++      G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT+D     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LSGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +   C   H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIV--CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Takifugu rubripes]
          Length = 1042

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 104/224 (46%), Gaps = 23/224 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSELSKYKIK 113
           D++     C   H  A+   G+ ++WG+N+ GQLG   HG  I    P I+  L      
Sbjct: 136 DVQIAQVACGYRHSHALSKGGQVFSWGQNQFGQLGLGMHGSSI--STPQIIQSLQGIPFA 193

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
           +  AG +H+  +T  G    +G NK GQLG     +   P+ ++ L S+ V   +CG D 
Sbjct: 194 QLSAGGAHSFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDH 253

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           T  L+   G     AG   YGQLGH + N               +  PR +  L G  + 
Sbjct: 254 TAALTKEGGVFTFGAG--GYGQLGHNSTNH--------------EINPRKVFELMGNIVT 297

Query: 233 KVACGTNHTVAVD-SKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           +++CG  HT+A   S G +Y++G GG G+LG R   +   P  V
Sbjct: 298 QISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPV 341



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/325 (26%), Positives = 140/325 (43%), Gaps = 31/325 (9%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V +  +G  YT G N+ GQLGH     R +P  V  L    I     G SHT
Sbjct: 39  VGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKP--RKKPEHVVALDAQIIVAVSGGESHT 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
           + + + G   ++G    GQLG  +    +  P  ++CL   ++   ACG   +  LS  +
Sbjct: 97  LALNDKGQIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYRHSHALS--K 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G  + + G  Q+GQLG G         SS+         P+ I +L G    +++ G  H
Sbjct: 155 GGQVFSWGQNQFGQLGLGMHG------SSIS-------TPQIIQSLQGIPFAQLSAGGAH 201

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           + A+   G V+ WG   +G+LG  +  D W P  +   +   V+     +S G  +++  
Sbjct: 202 SFAITLSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVI----YVSCGEDHTAAL 257

Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHFVGADSS--CI 352
              G ++      +G+L +N  +  + P+ + +L G  +  +  G  H      SS    
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSGKMY 317

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
           S+G    G+LG      + S  P K
Sbjct: 318 SFGLGGNGQLGTRSTCNRKSPAPVK 342



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAG 188
           L +G   +GQLG G I  EI   P +C      +V    CG   TV+L  ++  ++   G
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFL--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 + + +P  + AL  + IV V+ G +HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KPRKKPEHVVALDAQIIVAVSGGESHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            +++WG G  G+LG    ++   VPR +       +    A ++ G  +S   + GGQ++
Sbjct: 104 QIFSWGLGSDGQLGLNNFEECVRVPRNIKCLSDVQI----AQVACGYRHSHALSKGGQVF 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG+       L  +G     P+ +  L G     + +G  H F +    +   WG  ++
Sbjct: 160 SWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG      +    P  +  L    VI V+CG  H+
Sbjct: 220 GQLGLNDTNDR--WFPALLKSLRSQRVIYVSCGEDHT 254



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/328 (27%), Positives = 138/328 (42%), Gaps = 32/328 (9%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K+   G G  HTV + +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           GQLG    R   +P  V  L +++     G + +  L+  +   I + GL   GQLG   
Sbjct: 64  GQLGHEKPRK--KPEHVVALDAQIIVAVSGGE-SHTLALNDKGQIFSWGLGSDGQLG--- 117

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
               N  +  V++       PR I  L+   I +VACG  H+ A+   G V++WG   +G
Sbjct: 118 ---LNNFEECVRV-------PRNIKCLSDVQIAQVACGYRHSHALSKGGQVFSWGQNQFG 167

Query: 260 RLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
           +LG          P+ +   Q      P A +SAG  +S      G ++ WG+ K     
Sbjct: 168 QLGLGMHGSSISTPQIIQSLQG----IPFAQLSAGGAHSFAITLSGAVFGWGRNKFGQLG 223

Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKS 371
            N+ +D  +P  L  L    +  +  G  H   +  +    ++G   YG+LG+     + 
Sbjct: 224 LNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEI 283

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVI 399
           +  P+KV  L G  V  ++CG  H+L  
Sbjct: 284 N--PRKVFELMGNIVTQISCGRQHTLAF 309



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 86/180 (47%), Gaps = 6/180 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGG++   G   +  +G   G    ++ +P  ++ L G+    ++AG    H  A+ + G
Sbjct: 154 KGGQVFSWGQNQFGQLGL--GMHGSSISTPQIIQSLQGIPFAQLSAG--GAHSFAITLSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WGRN+ GQLG  D   R  P ++  L   ++     G  HT  +T++G    FG  
Sbjct: 210 AVFGWGRNKFGQLGLNDTNDRWFPALLKSLRSQRVIYVSCGEDHTAALTKEGGVFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG  S  +EI P  V  L+   VT  +CG   T+  +   G  + + GL   GQLG
Sbjct: 270 GYGQLGHNSTNHEINPRKVFELMGNIVTQISCGRQHTLAFTPSSG-KMYSFGLGGNGQLG 328


>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Hydra magnipapillata]
          Length = 364

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 127/271 (46%), Gaps = 30/271 (11%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +  L   DI  +A G +  H +AV   G  Y+WG    GQLGH  + ++ +P +V
Sbjct: 63  LEPKIIEQLCQKDIVQLAYG-MGPHVLAVTDSGELYSWGHGGYGQLGHTSE-EKSKPVLV 120

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
               + K+ +   G  H++ +TEDG   A+G N  GQLG G   N+  P  V  + S+ +
Sbjct: 121 --YMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKI 178

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            + +CG  FTV L++     + + G    GQLG   +N  N          + QP  R  
Sbjct: 179 VSVSCGQSFTVMLTT--DGELYSWGYNGNGQLG--IENNTN----------QLQPV-RVT 223

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            +L G+ I K+ CG  H + +   G +Y+WG   YG+LG     +  VP  ++    +  
Sbjct: 224 GSLFGKFIEKIVCGMAHVLVLTDIGELYSWGANSYGQLGLGTTHNTSVPTLINTTTDDRW 283

Query: 284 LPPEA----VISAGSVNSSCTAGGGQLYMWG 310
               A     ISAG   S      G++YMWG
Sbjct: 284 SDIAAHHYNHISAGVTIS------GKIYMWG 308



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 102/236 (43%), Gaps = 24/236 (10%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFG 135
           G  Y  G N  G LG GD      P I+ +L +  I +   G   H + VT+ G   ++G
Sbjct: 41  GDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWG 100

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
              +GQLG  S   E +  PV   + + V   ACG+  ++ L+  E   +   G    GQ
Sbjct: 101 HGGYGQLGHTS---EEKSKPVLVYMQKKVIQVACGSYHSIALT--EDGEVYAWGSNNCGQ 155

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG G  N               Q  P+ ++ +  + IV V+CG + TV + + G +Y+WG
Sbjct: 156 LGLGISNN--------------QATPKRVSLIPSKKIVSVSCGQSFTVMLTTDGELYSWG 201

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           + G G+LG     ++  P RV        +     I  G  +       G+LY WG
Sbjct: 202 YNGNGQLGIENNTNQLQPVRVTGSLFGKFIEK---IVCGMAHVLVLTDIGELYSWG 254



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 123/282 (43%), Gaps = 38/282 (13%)

Query: 111 KIKKA----GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
           K+KKA    GAG    + +T +G+  A G+N +G LG G   + +EP  +  L   ++  
Sbjct: 20  KVKKAFVFGGAGNEALLTLT-NGDVYALGFNGNGCLGVGDGSSTLEPKIIEQLCQKDIVQ 78

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G    V L+  +   + + G   YGQLGH                  ++ + + +  
Sbjct: 79  LAYGMGPHV-LAVTDSGELYSWGHGGYGQLGH-----------------TSEEKSKPVLV 120

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
              + +++VACG+ H++A+   G VY WG    G+LG     ++  P+RV +     ++ 
Sbjct: 121 YMQKKVIQVACGSYHSIALTEDGEVYAWGSNNCGQLGLGISNNQATPKRVSLIPSKKIVS 180

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDS 338
               +S G   +      G+LY WG        ++NN +     +    L G  +  +  
Sbjct: 181 ----VSCGQSFTVMLTTDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVC 236

Query: 339 GNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           G  H  V  D     SWG   YG+LG G     ++++P  ++
Sbjct: 237 GMAHVLVLTDIGELYSWGANSYGQLGLGT--THNTSVPTLIN 276



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 55/182 (30%)

Query: 219 RPRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            P+ I  L  + IV++A G   H +AV   G +Y+WG GGYG+LGH  ++     + V V
Sbjct: 64  EPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLGHTSEEKS---KPVLV 120

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
           + +  V+     ++ GS +S      G++Y                              
Sbjct: 121 YMQKKVIQ----VACGSYHSIALTEDGEVY------------------------------ 146

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                          +WG    G+LG G     + A PK+V ++    ++SV+CG   ++
Sbjct: 147 ---------------AWGSNNCGQLGLGI--SNNQATPKRVSLIPSKKIVSVSCGQSFTV 189

Query: 398 VI 399
           ++
Sbjct: 190 ML 191


>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
           [Toxoplasma gondii GT1]
          Length = 1020

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 126/298 (42%), Gaps = 48/298 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            + SP  +  L  ++   V+AG +    VA    G  Y WG N  GQLG GD+     P 
Sbjct: 120 EMASPRLVDALKNINSERVSAGGMQMAVVAHS--GELYMWGANSEGQLGTGDRRDASVPR 177

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------------SGSI 147
           +V  L    +K     + HTV   +DG++ A+G   +G+LG               S + 
Sbjct: 178 LVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 237

Query: 148 RNEIEPSPVRCLVSE-----------VTATACGADFTVWLSSVEG--ASILNAGLPQYGQ 194
               EP    C V             +   ACG   + +L   E    S+   GL   G+
Sbjct: 238 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGR 297

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LGHG + + +               P A+ AL    I  +ACG +HT  V S G +YTWG
Sbjct: 298 LGHGDEEDRHL--------------PTAVHALENVNITAIACGAHHTACVTSAGTLYTWG 343

Query: 255 FGGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
              +G+LG    +  + +P+ V    RN  +     ++ GS +S+C    G+LY WG+
Sbjct: 344 GAAFGKLGLGSTRGSQLLPKHVSGPLRNKAV---VSVALGSQHSACVTTDGELYTWGQ 398



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 100/245 (40%), Gaps = 46/245 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRD------ 99
           P  ++ L G  ++ VA  C   H V    +G  Y WG    G+LG HG  I         
Sbjct: 176 PRLVKALHGKVVKAVA--CSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVF 233

Query: 100 ------------------RPTIVSELSKYKIKKAGAGRSHTV---VVTEDGNSL-AFGWN 137
                              P ++  L  Y I     G  H+    +  +D  SL   G  
Sbjct: 234 SPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLG 293

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +G+LG G   +   P+ V  L +  +TA ACGA  T  ++S    ++   G   +G+LG
Sbjct: 294 LNGRLGHGDEEDRHLPTAVHALENVNITAIACGAHHTACVTSA--GTLYTWGGAAFGKLG 351

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            G+     T+ S +   + + P       L  + +V VA G+ H+  V + G +YTWG G
Sbjct: 352 LGS-----TRGSQLLPKHVSGP-------LRNKAVVSVALGSQHSACVTTDGELYTWGQG 399

Query: 257 GYGRL 261
             G L
Sbjct: 400 RRGNL 404



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 81/223 (36%), Gaps = 42/223 (18%)

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           E    PR + AL      +V+ G      V   G +Y WG    G+LG  +++D  VPR 
Sbjct: 119 EEMASPRLVDALKNINSERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRRDASVPRL 178

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-------------------N 315
           V       V      ++    ++ C    G  Y WG   N                   +
Sbjct: 179 VKALHGKVV----KAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFS 234

Query: 316 GDDWMYPKPLM------------DLSGWNLRCMDSGNMHH-FVGA----DSSCISWGHAQ 358
                 P+PL              L G+ +  +  G  H  F+G      +S  + G   
Sbjct: 235 PATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL 294

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G LG+G   ++   +P  V  LE +++ ++ACG  H+  +  
Sbjct: 295 NGRLGHG--DEEDRHLPTAVHALENVNITAIACGAHHTACVTS 335



 Score = 45.8 bits (107), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 64/228 (28%), Positives = 88/228 (38%), Gaps = 36/228 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC--YTWGRNERGQLGHGDKIQRDRPTI 103
           +P  L  L G  I  VA G      + +  + R   +T G    G+LGHGD+  R  PT 
Sbjct: 252 TPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGLNGRLGHGDEEDRHLPTA 311

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSE 162
           V  L    I     G  HT  VT  G    +G    G+LG GS R +++ P  V   +  
Sbjct: 312 VHALENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLGSTRGSQLLPKHVSGPLRN 371

Query: 163 VTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDN-------------------- 201
                  A  +V L S   A +   G L  +GQ   G                       
Sbjct: 372 K------AVVSVALGSQHSACVTTDGELYTWGQGRRGNLTRFFRGAWRRSLVSSSSTSFA 425

Query: 202 EYNTKDSSVKLAY-----EAQP-RPRAIAALAGETIVKVACGTNHTVA 243
           E  T  +S K        E  P RP  + AL G+ +V+++C +  TVA
Sbjct: 426 ETPTLHASSKTILGHGDPEVPPNRPACLRALNGKGVVQLSCASTFTVA 473



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 66/176 (37%), Gaps = 39/176 (22%)

Query: 265 EQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD-- 317
           E  +E   PR VD  +  N       +SAG +  +  A  G+LYMWG         GD  
Sbjct: 116 ETSEEMASPRLVDALKNIN----SERVSAGGMQMAVVAHSGELYMWGANSEGQLGTGDRR 171

Query: 318 DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSA--- 373
           D   P+ +  L G  ++ +     H     D  S  +WG A  G LG       SSA   
Sbjct: 172 DASVPRLVKALHGKVVKAVACSQEHTVCCLDDGSAYAWGCALNGRLGLHGLSIPSSAGLG 231

Query: 374 --------------------MPKKVDILEGMHVISVACGYGHSLVI----VDRTNV 405
                                P+ ++ L G  +  VACG  HS  +     DRT++
Sbjct: 232 VFSPATGARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSL 287


>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
           [Papio anubis]
 gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
           protein 1 [Macaca fascicularis]
 gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
 gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
          Length = 531

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLSGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  LS  KIK    G   H ++ TEDG   A+G N 
Sbjct: 44  FVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+    I P  V    L+ +V   ACG+  ++ L++     +   G    GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            G+                 QP PR +   L  + +V +ACG   ++AV   G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            G G+LG     ++  P RV       V      I  G  ++      G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT+D     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LSGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.0 bits (97), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|148223431|ref|NP_001085755.1| HECT and RLD domain containing E3 ubiquitin protein ligase family
           member 6 [Xenopus laevis]
 gi|49115314|gb|AAH73297.1| MGC80684 protein [Xenopus laevis]
          Length = 1028

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/267 (30%), Positives = 123/267 (46%), Gaps = 26/267 (9%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G LL CG   +  +GR+        +S    + +V V        C + H VA+  EG
Sbjct: 51  KDGTLLSCGQNPYGQLGRKGNNSRIEQISSLEAQTIVDV-------SCGTNHSVAMCDEG 103

Query: 78  RCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
             Y+WG    GQLG G    ++  P  ++ L   KI +   G  H+V + EDG   ++G 
Sbjct: 104 NIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNRKIIQISCGNFHSVALAEDGRVFSWGQ 163

Query: 137 NKHGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           NK GQLG GS I N+  P  V+ L  +  V  TA G+  T  LS     ++   G    G
Sbjct: 164 NKCGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQ-TFALSM--SGTVFAWGRNNAG 220

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG   D            A +   +P A+ +L    +  ++CG  HT  ++  G VYT+
Sbjct: 221 QLGFKND------------AKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTF 268

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR 280
           G   YG+LG +      VP++++ + R
Sbjct: 269 GDDTYGQLGQQSGNQTSVPQKIEEYSR 295



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/246 (26%), Positives = 116/246 (47%), Gaps = 31/246 (12%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   + G   +++L  ++  ++L+ G   YGQLG   +N                 R   
Sbjct: 36  VQKVSIGEKHSLYL--LKDGTLLSCGQNPYGQLGRKGNNS----------------RIEQ 77

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRN 281
           I++L  +TIV V+CGTNH+VA+  +G +Y+WG G  G+LG  +     + P+R+      
Sbjct: 78  ISSLEAQTIVDVSCGTNHSVAMCDEGNIYSWGDGSEGQLGTGKFSSKNFTPKRITGLLNR 137

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLR 334
            ++     IS G+ +S   A  G+++ WG+       L +   +   P+ +  L G  L 
Sbjct: 138 KIIQ----ISCGNFHSVALAEDGRVFSWGQNKCGQLGLGSQIINQATPQLVKSLKGIPLV 193

Query: 335 CMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            + +G    F  + S +  +WG    G+LG+    +K +  P  VD L  + V  ++CG 
Sbjct: 194 QVTAGGSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGE 253

Query: 394 GHSLVI 399
            H+ V+
Sbjct: 254 EHTAVL 259



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 153/341 (44%), Gaps = 43/341 (12%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKY-----KIKKAGAGRSHTVVVTEDGNSLAF 134
           Y WG N  GQL     ++ ++  +  + + Y      ++K   G  H++ + +DG  L+ 
Sbjct: 2   YCWGDNCFGQLA---VLEEEKEVVHFKENDYFQKKESVQKVSIGEKHSLYLLKDGTLLSC 58

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G N +GQLG     + IE   +  L ++ +   +CG + +V  +  +  +I + G    G
Sbjct: 59  GQNPYGQLGRKGNNSRIE--QISSLEAQTIVDVSCGTNHSV--AMCDEGNIYSWGDGSEG 114

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG G   ++++K+ +          P+ I  L    I++++CG  H+VA+   G V++W
Sbjct: 115 QLGTG---KFSSKNFT----------PKRITGLLNRKIIQISCGNFHSVALAEDGRVFSW 161

Query: 254 GFGGYGRLGHREQ-KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK- 311
           G    G+LG   Q  ++  P+ V   +      P   ++AG   +   +  G ++ WG+ 
Sbjct: 162 GQNKCGQLGLGSQIINQATPQLVKSLKG----IPLVQVTAGGSQTFALSMSGTVFAWGRN 217

Query: 312 ------LKNNGDDWMY-PKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELG 363
                  KN+     + P  +  L    +  +  G  H  V   D    ++G   YG+LG
Sbjct: 218 NAGQLGFKNDAKKGTFKPYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLG 277

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
                Q S  +P+K++      V  VACG  H+L+ V   N
Sbjct: 278 QQSGNQTS--VPQKIEEY-SRQVSQVACGRYHTLLYVFTCN 315



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 4/129 (3%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR--DR 100
           N  +P  ++ L G+ +  V AG       A+ + G  + WGRN  GQLG  +  ++   +
Sbjct: 177 NQATPQLVKSLKGIPLVQVTAG--GSQTFALSMSGTVFAWGRNNAGQLGFKNDAKKGTFK 234

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P  V  L    +     G  HT V+ +DG    FG + +GQLG  S      P  +    
Sbjct: 235 PYAVDSLRDLGVAYISCGEEHTAVLNKDGIVYTFGDDTYGQLGQQSGNQTSVPQKIEEYS 294

Query: 161 SEVTATACG 169
            +V+  ACG
Sbjct: 295 RQVSQVACG 303


>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
           [Papio anubis]
          Length = 355

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 125/270 (46%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEGLSGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 101/235 (42%), Gaps = 24/235 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  LS  KIK    G   H ++ TEDG   A+G N 
Sbjct: 44  FVFGLNYSNCLGTGDNQSTLVPKKLEGLSGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNG 103

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+    I P  V    L+ +V   ACG+  ++ L++     +   G    GQ+G
Sbjct: 104 YSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACGSHHSMALAA--DGEVFAWGYNNCGQVG 161

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            G+                 QP PR +   L  + +V +ACG   ++AV   G VY WG+
Sbjct: 162 SGSTAN--------------QPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGY 207

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            G G+LG     ++  P RV       V      I  G  ++      G LY WG
Sbjct: 208 NGNGQLGLGNNGNQLTPVRVAALHSVCV----NQIVCGYAHTLALTDEGLLYAWG 258



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 138/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   S  + VT+D     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKACVFGTSASEALYVTDDDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LSGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +   C   H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIV--CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|159037224|ref|YP_001536477.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916059|gb|ABV97486.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 558

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/326 (29%), Positives = 136/326 (41%), Gaps = 34/326 (10%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG N  GQLG G  I R+ P  VS      +     G SH++ +T  G  LA+G N  GQ
Sbjct: 62  WGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQ 121

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LG+G+  N   P  V  L  + T  A  A     L+     ++L  G    GQLG+G   
Sbjct: 122 LGTGNNLNSSVPITV-ALPPDTTVVAIAASHGHSLALTSAGAVLAWGANNVGQLGNG--- 177

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
             NT +S+  +     P         G T+  +A GTNH++A+ S G    WG  G G+L
Sbjct: 178 --NTFNSNTPVTVNLPP---------GTTVATIAAGTNHSLAITSTGAALAWGGNGNGQL 226

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLYMWGKLKN---- 314
           G+        P  V        LPP   I+   AGS  S      G    WG   N    
Sbjct: 227 GNNSTATSLEPIAV-------TLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNGQLG 279

Query: 315 --NGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
             N  D + P  +    G  +  + +G  H   V +  + ++WG    G+LG G     +
Sbjct: 280 TGNNADSLIPIAVALPPGTTITSIAAGFTHSLAVTSTGTALAWGGNSRGQLGIG--TTTN 337

Query: 372 SAMPKKVDILEGMHVISVACGYGHSL 397
           S  P  V++     + +   G+ HSL
Sbjct: 338 SDTPVIVNLPPDTTITTNDGGFFHSL 363



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 143/359 (39%), Gaps = 44/359 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D    A      H +A+   G    WG N  GQLG G+ +    P  V+      +    
Sbjct: 89  DTTVTAVAGGDSHSLALTSAGAVLAWGENNFGQLGTGNNLNSSVPITVALPPDTTVVAIA 148

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT-ACGADFTVW 175
           A   H++ +T  G  LA+G N  GQLG+G+  N   P  V        AT A G + ++ 
Sbjct: 149 ASHGHSLALTSAGAVLAWGANNVGQLGNGNTFNSNTPVTVNLPPGTTVATIAAGTNHSLA 208

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           ++S   A            L  G +      ++S   + E    P A+      TI  +A
Sbjct: 209 ITSTGAA------------LAWGGNGNGQLGNNSTATSLE----PIAVTLPPSTTITAIA 252

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---A 292
            G+++++A+ S G    WG    G+LG     D  +P  V        LPP   I+   A
Sbjct: 253 AGSSYSLAITSTGTALAWGGNSNGQLGTGNNADSLIPIAV-------ALPPGTTITSIAA 305

Query: 293 GSVNSSCTAGGGQLYMWG---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           G  +S      G    WG             N D  +    +++L        + G   H
Sbjct: 306 GFTHSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPV----IVNLPPDTTITTNDGGFFH 361

Query: 344 FVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +G+ S+   ++WG+   G+LG G     +S  P  V +  G  + ++A G GHSL +V
Sbjct: 362 SLGSMSTGAALAWGNNFSGQLGTG--NNTNSLDPIAVALPSGTKITTIAAGGGHSLALV 418



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 75/282 (26%), Positives = 117/282 (41%), Gaps = 36/282 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G N  GQLG GS      P  V     + VTA A G   ++ L+S    ++L  G  
Sbjct: 60  LAWGANNVGQLGDGSTIARNAPVAVSLPPDTTVTAVAGGDSHSLALTSA--GAVLAWGEN 117

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            +GQLG G     N  +SSV +     P           T+V +A    H++A+ S G V
Sbjct: 118 NFGQLGTG-----NNLNSSVPITVALPPD---------TTVVAIAASHGHSLALTSAGAV 163

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP---EAVISAGSVNSSCTAGGGQLY 307
             WG    G+LG+    +   P  V+       LPP    A I+AG+ +S      G   
Sbjct: 164 LAWGANNVGQLGNGNTFNSNTPVTVN-------LPPGTTVATIAAGTNHSLAITSTGAAL 216

Query: 308 MW------GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
            W          N+    + P  +       +  + +G+ +   + +  + ++WG    G
Sbjct: 217 AWGGNGNGQLGNNSTATSLEPIAVTLPPSTTITAIAAGSSYSLAITSTGTALAWGGNSNG 276

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           +LG G      S +P  V +  G  + S+A G+ HSL +   
Sbjct: 277 QLGTG--NNADSLIPIAVALPPGTTITSIAAGFTHSLAVTST 316



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G  I  +AAG    H +AV   G    WG N RGQLG G     D P IV+      I  
Sbjct: 297 GTTITSIAAGF--THSLAVTSTGTALAWGGNSRGQLGIGTTTNSDTPVIVNLPPDTTITT 354

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
              G  H++     G +LA+G N  GQLG+G+  N ++P
Sbjct: 355 NDGGFFHSLGSMSTGAALAWGNNFSGQLGTGNNTNSLDP 393


>gi|328704352|ref|XP_003242465.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Acyrthosiphon pisum]
          Length = 893

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAG 116
           +  V   C   HC+A+   G  YTWG NE GQLG G       +PT+V+ L    I    
Sbjct: 157 MLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIA 216

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
            G  H+ VV++ G    +G N  GQLG  S  +   P+ ++ + + +V   A G DF+V+
Sbjct: 217 CGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 276

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+   G     AG+  YGQLGHG              ++  +  PR +  L G T+ +V 
Sbjct: 277 LTYDGGVFTCGAGM--YGQLGHG--------------SFSNEIVPRKVLELMGSTVTQVT 320

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           CG  HT+  V SKG VY++G G  G+LG +   +   P+ V
Sbjct: 321 CGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 361



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 147/333 (44%), Gaps = 35/333 (10%)

Query: 80  YTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           Y WG    G+LG G   +        IV+  S   IK    G +HT+ VTEDG   A G 
Sbjct: 21  YCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS 80

Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N  GQLG    R +++  P V  LV  +T+ ACG   ++ L+  E   +   G    GQL
Sbjct: 81  NDFGQLGHDGCRTKLQKIPGVESLV--MTSVACGEAHSMALN--EWGQLYTWGSDSCGQL 136

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  TD                Q +P+ +  LA   +V+++CG  H +A+ + G +YTWG 
Sbjct: 137 GLETDEG-------------IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS 183

Query: 256 GGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
             +G+LG          P  V+      V  P + I+ G  +S   +  G ++ WGK   
Sbjct: 184 NEFGQLGLGLGPGNVSKPTLVNSL----VGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 239

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
                N+      P  L  +    ++ +  G +   F+  D    + G   YG+LG+G +
Sbjct: 240 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF 299

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +   +P+KV  L G  V  V CG  H+L +V
Sbjct: 300 SNE--IVPRKVLELMGSTVTQVTCGRRHTLTLV 330



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 34/261 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N+  PT +  LVG+ I F+A G    H   V   G  + WG+N+ GQLG   +     P 
Sbjct: 197 NVSKPTLVNSLVGLPISFIACG--GYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPA 254

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            +  +   K+K    G   +V +T DG     G   +GQLG GS  NEI P  V  L+ S
Sbjct: 255 QLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGS 314

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            VT   CG   T+ L   +G  + + GL   GQL  GT +  N+    + L     P   
Sbjct: 315 TVTQVTCGRRHTLTLVPSKG-RVYSFGLGSVGQL--GTKSSINSNTPQLVLGPWLSP--- 368

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-------------EQKD 268
                +G ++++    TN    V S   +Y  G   + R+ H+             E   
Sbjct: 369 -----SGTSMIE----TNKQYVVKS---IYAGGDQCFVRVTHKSLDICPDDYRIIQESSQ 416

Query: 269 EWVPRRVDVFQRNNVLPPEAV 289
            W  +  DV   + +LP   V
Sbjct: 417 IWTVKLSDVINLSTILPENPV 437



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 65/179 (36%), Gaps = 59/179 (32%)

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR--EQKDEWVPRRVDVFQRNNVLPPEA 288
           I  VACG NHT+AV   G +Y  G   +G+LGH     K + +P    +   +       
Sbjct: 56  IKSVACGNNHTLAVTEDGQLYACGSNDFGQLGHDGCRTKLQKIPGVESLVMTS------- 108

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
            ++ G  +S      GQLY W                                    G+D
Sbjct: 109 -VACGEAHSMALNEWGQLYTW------------------------------------GSD 131

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           S          G+LG     +     PK V  L  M ++ ++CGY H + +   TN GE
Sbjct: 132 SC---------GQLGLET-DEGIQYKPKIVKTLASMLLVQISCGYKHCMAL---TNHGE 177


>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
           [Xenopus (Silurana) tropicalis]
 gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
          Length = 1049

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 96/330 (29%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P          ++  G G  HTV V +DG     G N  
Sbjct: 4   WGNTSFGQLGLGGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + G   YGQ+G  
Sbjct: 64  GQLGHDKSRR--KPEQVGALDAQIIVAVSCGEAHTLALN--DKGQVFSWGHAVYGQIGLS 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           T  EY      +++       PR I +L+   IV+VACG +H++A+     +++WG   Y
Sbjct: 120 TAEEY------IRV-------PRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K E  PR +          P A I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGLEIKKECAPRHIKSLSG----IPFAHIAAGGGHSFALTISGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
              +  D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+L  V
Sbjct: 283 VN--PRKVFELMGSIVTQIACGRQHTLAFV 310



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 116/247 (46%), Gaps = 36/247 (14%)

Query: 35  RRK----GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RRK    GALD  ++               VA  C   H +A++ +G+ ++WG    GQ+
Sbjct: 72  RRKPEQVGALDAQII---------------VAVSCGEAHTLALNDKGQVFSWGHAVYGQI 116

Query: 91  GHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIR 148
           G     +  R P  +  LS  +I +   G  H++ +++D +  ++G N++GQLG G  I+
Sbjct: 117 GLSTAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALSKDSDIFSWGQNQYGQLGLGLEIK 176

Query: 149 NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            E  P  ++ L     A         +  ++ GA I   G  ++GQLG   + + N    
Sbjct: 177 KECAPRHIKSLSGIPFAHIAAGGGHSFALTISGA-IFGWGRNKFGQLGLTDETDRNV--- 232

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                      P  + +L  + I+ + CG +HT A+  +G V+T+G GGYG+LGH     
Sbjct: 233 -----------PALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNH 281

Query: 269 EWVPRRV 275
           E  PR+V
Sbjct: 282 EVNPRKV 288



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 161/364 (44%), Gaps = 38/364 (10%)

Query: 26  GSTCWDAVGRRKGALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
           G+T +  +G   G +D  +V  P R    +  ++R V  GC S H V V  +G  YT G 
Sbjct: 5   GNTSFGQLGL--GGIDEEVVLEPRRCDFFINKNVRDV--GCGSRHTVFVLDDGTVYTCGC 60

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS 144
           N+ GQLGH DK +R +P  V  L    I     G +HT+ + + G   ++G   +GQ+G 
Sbjct: 61  NDLGQLGH-DKSRR-KPEQVGALDAQIIVAVSCGEAHTLALNDKGQVFSWGHAVYGQIGL 118

Query: 145 GSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
            +    I  P  ++ L   ++   ACG   ++ LS  + + I + G  QYGQLG G    
Sbjct: 119 STAEEYIRVPRNIKSLSDVQIVQVACGHHHSLALS--KDSDIFSWGQNQYGQLGLG---- 172

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                    L  + +  PR I +L+G     +A G  H+ A+   G ++ WG   +G+LG
Sbjct: 173 ---------LEIKKECAPRHIKSLSGIPFAHIAAGGGHSFALTISGAIFGWGRNKFGQLG 223

Query: 263 HREQKDEWVPRRVDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
             ++ D  VP  +   +   ++          A+   G V +    G GQL       N+
Sbjct: 224 LTDETDRNVPALLKSLRSQKIIHICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNS 278

Query: 316 GDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSA 373
            +  + P+ + +L G  +  +  G  H   FV +     S+G    G+LG G    + S 
Sbjct: 279 TNHEVNPRKVFELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSP 338

Query: 374 MPKK 377
              K
Sbjct: 339 FTVK 342


>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
          Length = 4862

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCH 4354



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4340 LQGKNIRQISAGRCHSAAWT 4359



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|296086438|emb|CBI32027.3| unnamed protein product [Vitis vinifera]
          Length = 405

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 175/421 (41%), Gaps = 66/421 (15%)

Query: 12  EETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAG------C 65
           EE  ++KGGE+       W       G L    +    L  L+ +  RF +AG      C
Sbjct: 10  EENERDKGGEV-----EIWSWGAGTDGQLGTTRLEDEHLPQLLDLP-RFSSAGPISLLAC 63

Query: 66  VSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
              H +A+  +G+  TWGR   GQLGHGD +   +P  V  L  + +    AG SH+  V
Sbjct: 64  GGAHVLALTTDGKVVTWGRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFV 123

Query: 126 TEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL---SSVEG 181
           ++ G     G    GQLG G  ++   P  V    S+ V   ACG   ++ L   + + G
Sbjct: 124 SDTGCLFTCGDGSFGQLGHGDCKSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGLSG 183

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             +   G  + GQLG   D   NT+  SV         P+A   L G  I+ +    +H+
Sbjct: 184 DQVYGFGSGKRGQLGVSMD---NTRSISV---------PQATVGLEGVEIISIDANGDHS 231

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAGSVNSS 298
            A+ + G++YTWG  G+G        D   PR          LP       ++ G  +  
Sbjct: 232 AALSANGHLYTWGR-GFG-----STSDVHCPR---------CLPSSLCFTQVALGWNHML 276

Query: 299 CTAGGGQLYMWGKLKNN--GDDWMYPK--------------PLMDLSGWNLRCMDSGNMH 342
              GGG+++M G  ++   GD     +               +  L G N+  + +G  H
Sbjct: 277 VLTGGGEVFMLGGNRHGVLGDPQKGSQVKHLSEESREENLEKVQGLDGLNVVQIAAGAEH 336

Query: 343 HFVGADSSCI--SWGHAQYGELGYG-PYGQKSSAMPKKVDILEGMH-VISVACGYGHSLV 398
             +   +  +  +WG  ++G+LG G  Y Q S    +    L G H +I V CG G +  
Sbjct: 337 SALVTGNILVIKTWGWGEHGQLGLGNTYDQISPQAVRLGHRLPGQHTMIKVYCGSGFTFA 396

Query: 399 I 399
           I
Sbjct: 397 I 397



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 83/163 (50%), Gaps = 10/163 (6%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           +++WG G  G+LG    +DE +P+ +D+  R +   P ++++ G  +       G++  W
Sbjct: 22  IWSWGAGTDGQLGTTRLEDEHLPQLLDL-PRFSSAGPISLLACGGAHVLALTTDGKVVTW 80

Query: 310 GKLKN----NGD--DWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGEL 362
           G+  +    +GD    + PK +  L  + +  + +G  H    +D+ C+ + G   +G+L
Sbjct: 81  GRGTSGQLGHGDMVSSLQPKHVKLLESFVMTHVSAGWSHSGFVSDTGCLFTCGDGSFGQL 140

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G+G    KS   P KV   +  HV  +ACG  HSLV++  T +
Sbjct: 141 GHGDC--KSHCSPVKVSYFDSKHVDQIACGMRHSLVLLKGTGL 181


>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1100

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 157/374 (41%), Gaps = 45/374 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   + +D++++A  C   H V V  +G  ++WG    G+LGHG       P ++  
Sbjct: 298 PKALESTIVLDVQYIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA 355

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
           LS   I+    G  H+  VT  G+   +G    G LG G+  +   P  V  L+    V+
Sbjct: 356 LSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 415

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + ACG   T  ++S     +   G   +G LGHG          SV +       PR + 
Sbjct: 416 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SVFI-------PREVD 459

Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           +L G   V+ ACG  HT AV             S G ++TWG G   RLGH +++ + VP
Sbjct: 460 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 519

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
             V       V P    ++ G   +      G +Y     ++G+L N   D   P  +  
Sbjct: 520 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVEG 575

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L    +  +  G  H   + + +   +WG    G LG+G    ++S  P  V+ L+   
Sbjct: 576 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS--PTLVESLKDKQ 633

Query: 386 VISVACGYGHSLVI 399
           V S+ACG   +  +
Sbjct: 634 VKSIACGSNFTAAV 647



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG    V L + +G S  + G    G+LGHG D+                 
Sbjct: 305 IVLDVQYIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNVQ-------------- 348

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P+ I AL+   I  VACG  H+ AV   G +YTWG G +G LGH  +   WVP+RV+  
Sbjct: 349 HPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 408

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                +   + I+ G  +++     GQL+                               
Sbjct: 409 MEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 434

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         ++G   +G LG+G   +KS  +P++VD L+G+  +  ACG  H+  
Sbjct: 435 --------------TFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVRAACGVWHTAA 478

Query: 399 IVD 401
           +V+
Sbjct: 479 VVE 481


>gi|323451188|gb|EGB07066.1| hypothetical protein AURANDRAFT_71888 [Aureococcus anophagefferens]
          Length = 1060

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/234 (35%), Positives = 111/234 (47%), Gaps = 25/234 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIV--SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y  G N  GQLG GD+  R  P  V  S L K ++     G S++VVV   G   + G N
Sbjct: 35  YACGYNATGQLGCGDRESRVVPWRVRTSRLGKGRVDGVACGSSYSVVVVA-GQVASCGKN 93

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            HGQLG G    E  P  V  L    V A A     T+ L   +   + + G    GQLG
Sbjct: 94  VHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLALD--DRGRVYSWGRGDEGQLG 151

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           HG              A+EA P PR IA L   ++V V  G  H++A+D+ G VY+WG G
Sbjct: 152 HG--------------AFEAVPHPRRIARLP-TSVVAVGAGRTHSLALDADGAVYSWGCG 196

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             G LGH +++ +  PR V+ F+      P A +S GS +++     G L  WG
Sbjct: 197 DDGALGHGDRRRQLAPRAVEFFKTR----PAAAVSCGSRHNAVVTADGALVTWG 246



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 150/366 (40%), Gaps = 51/366 (13%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C S + V V V G+  + G+N  GQLGHG + +   P +V  L   ++    A  +HT+ 
Sbjct: 74  CGSSYSVVV-VAGQVASCGKNVHGQLGHGGRDEETAPRVVEGLRGVRVVAVAARGAHTLA 132

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASI 184
           + + G   ++G    GQLG G+   E  P P R      +  A GA  T  L+     ++
Sbjct: 133 LDDRGRVYSWGRGDEGQLGHGAF--EAVPHPRRIARLPTSVVAVGAGRTHSLALDADGAV 190

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
            + G    G LGHG        D   +LA      PRA+          V+CG+ H   V
Sbjct: 191 YSWGCGDDGALGHG--------DRRRQLA------PRAVEFFKTRPAAAVSCGSRHNAVV 236

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA-GSVNSSCT--- 300
            + G + TWG+  YG+ G     D   P  V +         E V++A G  ++ C    
Sbjct: 237 TADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGA---ECVLAACGYRHTLCATRH 293

Query: 301 AGGGQLYMWG---------------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH--- 342
           A G  ++ +G                 +  G  ++  +   D  G  +  + +G  H   
Sbjct: 294 ASGDAIWAFGWNAYGQCGGSTCSAAAPRRVGGKFLGSQEGGD--GAVVEALSAGGRHSVC 351

Query: 343 --HFVGADSSCISWGHAQYGELGYGP-----YGQKSSAMPKKVDILEGMHVISVACGYGH 395
                G  ++  +WG    G+LG G         + +A   +V+ +    +  +ACG+ H
Sbjct: 352 CVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARVNSVGQRPLRGLACGWAH 411

Query: 396 SLVIVD 401
           ++ +VD
Sbjct: 412 TVFVVD 417



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 118/273 (43%), Gaps = 32/273 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           +R VA      H +A+D  GR Y+WGR + GQLGHG       P  ++ L    +   GA
Sbjct: 118 VRVVAVAARGAHTLALDDRGRVYSWGRGDEGQLGHGAFEAVPHPRRIARLPT-SVVAVGA 176

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           GR+H++ +  DG   ++G    G LG G  R ++ P  V    +    A +CG+     +
Sbjct: 177 GRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTRPAAAVSCGSRHNAVV 236

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           ++ +GA ++  G   YGQ G     +   + + V L  +            G   V  AC
Sbjct: 237 TA-DGA-LVTWGWAAYGQCGASAGGD-GLRPAEVPLPGD-----------GGAECVLAAC 282

Query: 237 GTNHTVAVD---SKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVI-- 290
           G  HT+      S   ++ +G+  YG+ G         PRRV   F  +      AV+  
Sbjct: 283 GYRHTLCATRHASGDAIWAFGWNAYGQCGG-STCSAAAPRRVGGKFLGSQEGGDGAVVEA 341

Query: 291 -SAGSVNSSC----TAGGGQLYMWGKLKNNGDD 318
            SAG  +S C      GG   Y WG+    GDD
Sbjct: 342 LSAGGRHSVCCVRLPGGGTATYAWGR----GDD 370



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/241 (26%), Positives = 98/241 (40%), Gaps = 16/241 (6%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           R +  +    VA G    H +A+D +G  Y+WG  + G LGHGD+ ++  P  V      
Sbjct: 162 RRIARLPTSVVAVGAGRTHSLALDADGAVYSWGCGDDGALGHGDRRRQLAPRAVEFFKTR 221

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL---VSEVTATA 167
                  G  H  VVT DG  + +GW  +GQ G+ +  + + P+ V       +E    A
Sbjct: 222 PAAAVSCGSRHNAVVTADGALVTWGWAAYGQCGASAGGDGLRPAEVPLPGDGGAECVLAA 281

Query: 168 CGADFTVWLSS-VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           CG   T+  +    G +I   G   YGQ G  T +    +    K     +         
Sbjct: 282 CGYRHTLCATRHASGDAIWAFGWNAYGQCGGSTCSAAAPRRVGGKFLGSQE-------GG 334

Query: 227 AGETIVKVACGTNHTV-AVDSKG---YVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQRN 281
            G  +  ++ G  H+V  V   G     Y WG G  G+LG  +++D    PR      R 
Sbjct: 335 DGAVVEALSAGGRHSVCCVRLPGGGTATYAWGRGDDGQLGSGDRRDRRANPRVAATAARV 394

Query: 282 N 282
           N
Sbjct: 395 N 395


>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1075

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 45/374 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   + +D++ +A  C   H V V  +G  ++WG    G+LGHG      +P ++  
Sbjct: 299 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 356

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
           L+   I+    G  H+  VT  G+   +G    G LG G+  +   P  V  L+    V+
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + ACG   T  ++S     +   G   +G LGHG          SV +       PR + 
Sbjct: 417 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDKK-------SVFI-------PREVD 460

Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH  ++ + VP
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
             V       V P    ++ G   +      G +Y     ++G+L N+  D   P  +  
Sbjct: 521 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEG 576

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L    +  +  G  H   + + +   +WG    G LG+G    ++S  P  V+ L+   
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 634

Query: 386 VISVACGYGHSLVI 399
           V S+ACG   +  +
Sbjct: 635 VKSIACGTNFTAAV 648



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG    V L + +G S  + G    G+LGHG D+                 
Sbjct: 306 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNIQ-------------- 349

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +P+ I AL    I  VACG  H+ AV   G +YTWG G +G LGH  +   WVP+RV+  
Sbjct: 350 QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFL 409

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                +   + I+ G  +++     GQL+                               
Sbjct: 410 LEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 435

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         ++G   +G LG+G   +KS  +P++VD L+G+  +  ACG  H+  
Sbjct: 436 --------------TFGDGTFGVLGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAA 479

Query: 399 IVD 401
           +V+
Sbjct: 480 VVE 482



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 94/215 (43%), Gaps = 39/215 (18%)

Query: 58  IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +R V A C   H  AV               G+ +TWG  ++G+LGHG+K  +  PT V+
Sbjct: 465 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVA 524

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
            L +    +   G S TV +T  G+    G   +GQLG+    G + N +E    +  V 
Sbjct: 525 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKLPNRVEGKLHKSFVE 584

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           E+   ACGA     L+S     +   G    G+LGHG  ++ N+              P 
Sbjct: 585 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDVDDRNS--------------PT 625

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            + +L  + +  +ACGTN T AV     ++ W  G
Sbjct: 626 LVESLKDKQVKSIACGTNFTAAV----CIHRWASG 656



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 129/311 (41%), Gaps = 35/311 (11%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
           ++    G  H V+VT+ G S ++G    G+LG G   N  +P  +  L  + +   ACG 
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG- 368

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F     ++ G  +   G   +G LGHG +  +              P+ R    L G  
Sbjct: 369 EFHSCAVTLSG-DLYTWGKGDFGVLGHGNEVSHWV------------PK-RVNFLLEGIH 414

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
           +  +ACG  HT  V S G ++T+G G +G LGH ++K  ++PR VD  +    V     V
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 474

Query: 290 ISAGSV-------NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCM 336
               +V       +SS     G+L+ WG          N +  + P  +  L   N   +
Sbjct: 475 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQV 534

Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYG 394
             G+        S  + + G   YG+LG          +P +V+  L    V  +ACG  
Sbjct: 535 ACGHSLTVALTTSGHVYTMGSPVYGQLG---NSHADGKLPNRVEGKLHKSFVEEIACGAY 591

Query: 395 HSLVIVDRTNV 405
           H  V+  RT V
Sbjct: 592 HVAVLTSRTEV 602


>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
           [Strongylocentrotus purpuratus]
          Length = 536

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 38/256 (14%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHTVVVTE 127
           H VA    G  Y+WG N   QLG+G   Q   P  I   L   KI +   G  H++V+T+
Sbjct: 90  HVVAATENGEIYSWGHNGYCQLGNGTTNQGLLPHRITGNLGSCKISQIACGSHHSLVLTD 149

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASIL 185
            G   A+G+N  GQ+GSG+  N   P  V  ++    V + ACG   T  L+ V+   + 
Sbjct: 150 RGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQ--TSSLAVVDSGEVY 207

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
             G    GQLG G  N  N            QP P  +++L G  I + ACG  H++A+ 
Sbjct: 208 GWGYNGNGQLGLG--NNVN------------QPSPCKVSSLNGLIISQAACGYAHSMALS 253

Query: 246 SKGYVYTWGFGGYGRLGHREQKD--------EWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            +G +YTWG   YG+LG   + +        E + R +D+   +      A ISA    +
Sbjct: 254 DEGNIYTWGANSYGQLGTGNKANLCGAAKIGESIGRFIDIAATH-----YAHISAAMTQT 308

Query: 298 SCTAGGGQLYMWGKLK 313
                 G++YMWG+ +
Sbjct: 309 ------GKVYMWGQCR 318



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 29/260 (11%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
           G+  +  + VT+D    AFG N +  LG G + + + P  +  L  + + A A G+   V
Sbjct: 32  GSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGPHV 91

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            +++ E   I + G   Y QLG+GT N             +     R    L    I ++
Sbjct: 92  -VAATENGEIYSWGHNGYCQLGNGTTN-------------QGLLPHRITGNLGSCKISQI 137

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--A 292
           ACG++H++ +  +G V+ WG+   G++G     +   PR+V      +VL  + V+S   
Sbjct: 138 ACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVV-----SVLGGKRVVSIAC 192

Query: 293 GSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVG 346
           G  +S      G++Y WG   N     G++   P P  +  L+G  +     G  H    
Sbjct: 193 GQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMAL 252

Query: 347 ADSSCI-SWGHAQYGELGYG 365
           +D   I +WG   YG+LG G
Sbjct: 253 SDEGNIYTWGANSYGQLGTG 272



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 64/120 (53%), Gaps = 1/120 (0%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           ++  G+       N+ +P ++  ++G   R V+  C     +AV   G  Y WG N  GQ
Sbjct: 158 YNNCGQVGSGATANISTPRKVVSVLGGK-RVVSIACGQTSSLAVVDSGEVYGWGYNGNGQ 216

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G+ + +  P  VS L+   I +A  G +H++ ++++GN   +G N +GQLG+G+  N
Sbjct: 217 LGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSDEGNIYTWGANSYGQLGTGNKAN 276



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 66/137 (48%), Gaps = 4/137 (2%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP-TIVSELSKYKIKKAGAGRSHT 122
            C S H + +   G  + WG N  GQ+G G       P  +VS L   ++     G++ +
Sbjct: 138 ACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVSVLGGKRVVSIACGQTSS 197

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTVWLSSVEG 181
           + V + G    +G+N +GQLG G+  N+  P  V  L   + +  ACG   ++ LS  EG
Sbjct: 198 LAVVDSGEVYGWGYNGNGQLGLGNNVNQPSPCKVSSLNGLIISQAACGYAHSMALSD-EG 256

Query: 182 ASILNAGLPQYGQLGHG 198
            +I   G   YGQLG G
Sbjct: 257 -NIYTWGANSYGQLGTG 272


>gi|158286478|ref|XP_001688080.1| AGAP006994-PB [Anopheles gambiae str. PEST]
 gi|157020487|gb|EDO64729.1| AGAP006994-PB [Anopheles gambiae str. PEST]
          Length = 1060

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 151/337 (44%), Gaps = 36/337 (10%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    G+LG G  ++ Q   P  +      ++ +   G SHT+ +T++G   A G N
Sbjct: 4   YCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVECGTSHTLFLTKEGKMYACGNN 63

Query: 138 KHGQLGS--GSIRNE-IEPSPVRCLVSE----VTATACGADFTVWLSSVEGASILNAGLP 190
            HGQLG    ++ N+    S  + L S     +T  +CG   ++ L++     + + G  
Sbjct: 64  DHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTN--WGQVFSWGSN 121

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
             GQLGH  +N               QP PR I A+  + +V++A G  H +A+ + G +
Sbjct: 122 AVGQLGHDAEN-------------GRQPTPRMIKAIGAKHVVQIASGQYHCLALTNNGEL 168

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           Y WG   YG+LG      E VP    +     V  P A I+ G  +S   +  G ++ WG
Sbjct: 169 YAWGSNSYGQLG-IGTTSEKVPMPTLIQSLAGV--PIAFIACGGNHSFAVSKSGAIFGWG 225

Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELG 363
           K        N+ +   YP  L  L    +R +  G +   F+  +    + G   +G+LG
Sbjct: 226 KNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTFGQLG 285

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +G     +  +P+KV  L G  +  +ACG  H+L  V
Sbjct: 286 HG--SCSNEIVPRKVFELMGSKITQIACGRRHTLAFV 320



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 85/187 (45%), Gaps = 6/187 (3%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G   G     +  PT ++ L GV I F+A G    H  AV   G  
Sbjct: 166 GELYAWGSNSYGQLG--IGTTSEKVPMPTLIQSLAGVPIAFIACG--GNHSFAVSKSGAI 221

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG+N  GQLG  D   R  PT +  L    ++    G   +V +T +G     G    
Sbjct: 222 FGWGKNTFGQLGLNDLNSRCYPTQLRTLRSLGVRYISCGDDFSVFLTNEGGVFTCGAGTF 281

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG GS  NEI P  V  L+ S++T  ACG   T+      G  I   GL   GQLG G
Sbjct: 282 GQLGHGSCSNEIVPRKVFELMGSKITQIACGRRHTLAFVPSRG-KIYGFGLGGVGQLGIG 340

Query: 199 TDNEYNT 205
               ++T
Sbjct: 341 MVGNHST 347



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT+LR L  + +R+++ G      V +  EG  +T G    GQLGHG       P  V E
Sbjct: 243 PTQLRTLRSLGVRYISCG--DDFSVFLTNEGGVFTCGAGTFGQLGHGSCSNEIVPRKVFE 300

Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L   KI +   GR HT+  V   G    FG    GQLG G + N   P  VR
Sbjct: 301 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLGGVGQLGIGMVGNHSTPQIVR 352



 Score = 44.7 bits (104), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 73/173 (42%), Gaps = 23/173 (13%)

Query: 250 VYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           +Y WG   +G LG    E++   VPR++D  Q + V+  E     G+ ++      G++Y
Sbjct: 3   IYCWGNTAHGELGLGGIEEEQVMVPRKMDWSQADEVVRVEC----GTSHTLFLTKEGKMY 58

Query: 308 M-----WGKLKNNGDDWMYPKP-------LMDLSGWNLRCMDSGNMHHFVGAD-SSCISW 354
                  G+L ++ D     +P       L  L  + + C+  G  H     +     SW
Sbjct: 59  ACGNNDHGQLGHDLDTLPNKRPRMSRFKRLTSLENYIITCISCGTAHSLALTNWGQVFSW 118

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           G    G+LG+     +    P+ +  +   HV+ +A G  H L +   TN GE
Sbjct: 119 GSNAVGQLGHDAENGRQPT-PRMIKAIGAKHVVQIASGQYHCLAL---TNNGE 167


>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
          Length = 4862

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNIRQISAGRCH 4354



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4340 LQGKNIRQISAGRCHSAAWT 4359



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|66801165|ref|XP_629508.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
 gi|60462899|gb|EAL61096.1| regulator of chromosome condensation  domain-containing protein
           [Dictyostelium discoideum AX4]
          Length = 455

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 125/276 (45%), Gaps = 49/276 (17%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH---------- 92
           N  +PT +  L    I  +  G    H +AV   G  + WG N  GQ+G           
Sbjct: 180 NRTAPTPVETLNNQHIIDIGVGL--DHSIAVTKAGHVFGWGYNVEGQIGQKVVEYTRMNS 237

Query: 93  ------GDK--------------IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
                 G++              ++   PT+V  L + KI     G   T +++  GN  
Sbjct: 238 TTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFCGYDSTFLLSARGNVY 297

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASILNAG 188
           +FG N+ G LG GS        P +   +E    +   + GA  T++L+S  G ++ + G
Sbjct: 298 SFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQLSSGASHTLFLTS--GGNVYSCG 355

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               G+LG G D     +DS   L Y  Q + +         IVKVA G +H++A+D +G
Sbjct: 356 WGTEGRLGLGMDTS--NRDSPTLLKYFNQNKIK---------IVKVAAGGSHSMALDDQG 404

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            VYTWG G  G+LGH  + DE +P++++ F  +NV+
Sbjct: 405 RVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVI 440



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 153/356 (42%), Gaps = 39/356 (10%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           +  + Y WG N+ G +    + Q   PT +  L    ++K   GRS T+V+T DG  L F
Sbjct: 107 ISNKVYMWGTNKSGNMSLPSE-QYRFPTTIDLLKNTFVEKVIGGRSFTLVLTRDGKVLGF 165

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G N  GQLG G  RN   P+PV  L ++ +     G D ++ ++  +   +   G    G
Sbjct: 166 GENNFGQLGLGDTRNRTAPTPVETLNNQHIIDIGVGLDHSIAVT--KAGHVFGWGYNVEG 223

Query: 194 QLGHGTDNEYNTKDSSVK------------LAYEAQPR-----PRAIAALAGETIVKVAC 236
           Q+G     EY   +S+ +            L  +  P      P  +  L    I  V C
Sbjct: 224 QIGQKVV-EYTRMNSTTEVMDGEEEGGAGSLREQMIPDVEYTLPTLVPGLEQIKISNVFC 282

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNVLPPEAVISAGS 294
           G + T  + ++G VY++G    G LG   +    V  P ++   + N  +     +S+G+
Sbjct: 283 GYDSTFLLSARGNVYSFGSNEIGTLGLGSELKGRVTKPTKIKFTETNEKIKQ---LSSGA 339

Query: 295 VNSSCTAGGGQLYM--WGK-----LKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFV 345
            ++     GG +Y   WG      L  +  +   P  L   +   ++ +   +G  H   
Sbjct: 340 SHTLFLTSGGNVYSCGWGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMA 399

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             D   + +WG+   G+LG+G   +    +PK+++     +VI +  G  +SLV++
Sbjct: 400 LDDQGRVYTWGNGSNGKLGHG--NESDENLPKQINFFSHSNVIDIFAGIDNSLVLI 453



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 19  GGELLFCGSTCWDAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           GG +  CG   W   GR    +D  N  SPT L+      I+ V       H +A+D +G
Sbjct: 348 GGNVYSCG---WGTEGRLGLGMDTSNRDSPTLLKYFNQNKIKIVKVAAGGSHSMALDDQG 404

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           R YTWG    G+LGHG++   + P  ++  S   +    AG  +++V+ ++
Sbjct: 405 RVYTWGNGSNGKLGHGNESDENLPKQINFFSHSNVIDIFAGIDNSLVLIKE 455


>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
           distachyon]
          Length = 1007

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 165/380 (43%), Gaps = 49/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D++ ++  C S H      +G  +TWG    G+LGHG      RP 
Sbjct: 241 DVLIPKPLESDVVLDVQQIS--CGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPK 298

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  L+   ++    G  HT  VT  G+   +G   +  G LG G   +   P  V   +
Sbjct: 299 LVESLAVSNVEYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPL 358

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG+    W S++  +S  +   G   +G LGHG  N  N       +AY  
Sbjct: 359 EGLQVLSVACGS----WHSALAMSSGKVFTFGDGTFGALGHG--NREN-------VAY-- 403

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKG----------YVYTWGFGGYGRLGHREQ 266
              P+ + +L+G   +KVACG  H+ A+               ++TWG G   RLGH ++
Sbjct: 404 ---PKEVESLSGFRTMKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDK 460

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDWMY 321
           +   VP  V     NN       ++ G   +   A  G ++      +G+L N   D   
Sbjct: 461 EARLVPTVVQALVDNNF----HQVACGYSMTIALATSGHVFTMGSSNYGQLGNPKADGKQ 516

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D LS   +  +  G+ H   + + S   +WG    G LG+G  G +    P  VD
Sbjct: 517 PCQVQDKLSSELVEEISCGSYHVAVLTSRSEVYTWGMGANGRLGHG--GIEDKKKPTIVD 574

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S+ACG   +  I
Sbjct: 575 ALKDRHVKSIACGSNFTTCI 594



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + +++CG+ H      +G V+TWG    GRLGH   +D   P+ V+   
Sbjct: 245 PKPLESDVVLDVQQISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLA 304

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            +NV      I+ G  ++      G LY WG    N            W+  +    L G
Sbjct: 305 VSNV----EYIACGEFHTCAVTASGDLYNWGDGSYNAGLLGHGIGASHWLPKRVSGPLEG 360

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   +++ A PK+V+ L G   + V
Sbjct: 361 LQVLSVACGSWHSALAMSSGKVFTFGDGTFGALGHG--NRENVAYPKEVESLSGFRTMKV 418

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  HS  IV+ T+
Sbjct: 419 ACGVWHSAAIVETTS 433



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 52/171 (30%), Positives = 79/171 (46%), Gaps = 17/171 (9%)

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF----QRNNVLPPEAVISAGSVNSSC 299
           ++S G VY WG   +  +   E     V  + DV       ++V+     IS GS + + 
Sbjct: 210 IESLGDVYVWG-EVWTDVIPSEGSSNLVCSKTDVLIPKPLESDVVLDVQQISCGSRHIAL 268

Query: 300 TAGGGQLYMWG-----KLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCI 352
           T   G+++ WG     +L +  D D   PK +  L+  N+  +  G  H   V A     
Sbjct: 269 TTRQGEVFTWGEELGGRLGHGTDEDISRPKLVESLAVSNVEYIACGEFHTCAVTASGDLY 328

Query: 353 SWGHAQY--GELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIV 400
           +WG   Y  G LG+G     S  +PK+V   LEG+ V+SVACG  HS + +
Sbjct: 329 NWGDGSYNAGLLGHGIGA--SHWLPKRVSGPLEGLQVLSVACGSWHSALAM 377


>gi|351542219|ref|NP_001084549.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus laevis]
          Length = 600

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 124/268 (46%), Gaps = 22/268 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I+ ++ G    H +  + +G  Y+WG N   QLG+G+ IQ   P  +
Sbjct: 133 IMPRRLDVLCGKKIKDLSYGS-GPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 191

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
             EL   K+ K   G  H++ +T DG   ++G+N  GQ+GSG+  N+  P  V   +   
Sbjct: 192 CMELLSKKVIKVACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSK 251

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +  A  T  ++  +   +   G    GQLG G     NT +         Q  P  +
Sbjct: 252 VVVSIAAGQTSSMAITDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 297

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  I++V  G  H++A+  +G +Y WG   +G+LG   + ++ VP +V   +R   
Sbjct: 298 VFAQPVCIIQVVLGYAHSLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 354

Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
                V +  S N S+  +  GQ+YMWG
Sbjct: 355 --MVEVAACHSTNISAAKSQSGQVYMWG 380



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDGNSLAFGWNK 138
           + +G N    LG GD      P  +  L   KIK    G   H ++  EDG   ++G N 
Sbjct: 114 FVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHILLCNEDGEVYSWGHNG 173

Query: 139 HGQLGSGSIRNEIEPSPV--RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           + QLG+G+      P  V    L  +V   ACG+  ++ L+S     + + G    GQ+G
Sbjct: 174 YSQLGNGNTIQGTTPVQVCMELLSKKVIKVACGSHHSMALTS--DGEVFSWGYNNSGQVG 231

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            GT     T + SV         PR + ++L  + +V +A G   ++A+   G+VY WG+
Sbjct: 232 SGT-----TANQSV---------PRKVSSSLQSKVVVSIAAGQTSSMAITDNGHVYGWGY 277

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA--GSVNSSCTAGGGQLYMWG 310
            G G+LG     ++ +P R+ VF +     P  +I    G  +S   +  G LY WG
Sbjct: 278 NGTGQLGLGNTGNQLMPCRL-VFAQ-----PVCIIQVVLGYAHSLALSDQGVLYAWG 328



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 29/278 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G+  +  +  T++     FG N    LG+G  ++ I P  +  L   ++   + G+   +
Sbjct: 98  GSSANEAIYTTQNNEVFVFGMNSSNCLGTGDNQSAIMPRRLDVLCGKKIKDLSYGSGPHI 157

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L + +G  + + G   Y QLG+G   +  T    V++  E          L  + ++KV
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIKV 203

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++A+ S G V++WG+   G++G     ++ VPR+V    ++ V+     I+AG 
Sbjct: 204 ACGSHHSMALTSDGEVFSWGYNNSGQVGSGTTANQSVPRKVSSSLQSKVV---VSIAAGQ 260

Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            +S      G +Y WG        L N G+  M P  L+      +  +  G  H    +
Sbjct: 261 TSSMAITDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPVCIIQVVLGYAHSLALS 319

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           D   + +WG   +G+LG G   + +  +P KV   E M
Sbjct: 320 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 355


>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus gallus]
          Length = 4860

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4158

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + TV +S+ +G+ +   G   YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVST-DGSMVWAFGDGDYGK 4217

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4263

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P++V V   + V   +  I+ G+ ++   +  G +Y WG    
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQVPVL--SGVFIED--IAVGAEHTLALSSTGDVYAWGSNSE 4319

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4320 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 4353



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+    V+  S  + ++   G++ T V+  +G  LA 
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 4050

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V + G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLF 4155

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H    +    + W  G   YG+LG G    
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTA 4225

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVDIL G+ +  VACG   S+ + 
Sbjct: 4226 KSS--PQKVDILCGIGIKKVACGTQFSVALT 4254



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 34/303 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G +++ + +G  H      +  D   ++W H
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW-H 746

Query: 357 AQY 359
             Y
Sbjct: 747 RPY 749



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGVSIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  +A G  + H +A+   G  Y WG N  GQLG G       PT+++ 
Sbjct: 4281 PQQVPVLSGVFIEDIAVG--AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4338

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4339 LQGKNIRQISAGRCHSAAWT 4358



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
          Length = 1062

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 45/374 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   + +D++ +A  C   H V V  +G  ++WG    G+LGHG      +P ++  
Sbjct: 286 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 343

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
           L+   I+    G  H+  VT  G+   +G    G LG G+  +   P  V  L+    V+
Sbjct: 344 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 403

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + ACG   T  ++S     +   G   +G LGHG          SV +       PR + 
Sbjct: 404 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDKK-------SVFI-------PREVD 447

Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH  ++ + VP
Sbjct: 448 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 507

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
             V       V P    ++ G   +      G +Y     ++G+L N+  D   P  +  
Sbjct: 508 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 563

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L    +  +  G  H   + + +   +WG    G LG+G    ++S  P  V+ L+   
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 621

Query: 386 VISVACGYGHSLVI 399
           V S+ACG   +  +
Sbjct: 622 VKSIACGTNFTAAV 635



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG    V L + +G S  + G    G+LGHG D+                 
Sbjct: 293 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNIQ-------------- 336

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +P+ I AL    I  VACG  H+ AV   G +YTWG G +G LGH  +   WVP+RV+  
Sbjct: 337 QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFL 396

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                +   + I+ G  +++     GQL+                               
Sbjct: 397 LEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 422

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         ++G   +G LG+G   +KS  +P++VD L+G+  +  ACG  H+  
Sbjct: 423 --------------TFGDGTFGVLGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAA 466

Query: 399 IVD 401
           +V+
Sbjct: 467 VVE 469



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 39/215 (18%)

Query: 58  IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +R V A C   H  AV               G+ +TWG  ++G+LGHG+K  +  PT V+
Sbjct: 452 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVA 511

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
            L +    +   G S TV +T  G+    G   +GQLG+    G   N +E    +  V 
Sbjct: 512 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVE 571

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           E+   ACGA     L+S     +   G    G+LGHG  ++ N+              P 
Sbjct: 572 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDVDDRNS--------------PT 612

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            + +L  + +  +ACGTN T AV     ++ W  G
Sbjct: 613 LVESLKDKQVKSIACGTNFTAAV----CIHRWASG 643



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 130/311 (41%), Gaps = 35/311 (11%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
           ++    G  H V+VT+ G S ++G    G+LG G   N  +P  +  L  + +   ACG 
Sbjct: 297 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG- 355

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F     ++ G  +   G   +G LGHG +  +              P+ R    L G  
Sbjct: 356 EFHSCAVTLSG-DLYTWGKGDFGVLGHGNEVSHWV------------PK-RVNFLLEGIH 401

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
           +  +ACG  HT  V S G ++T+G G +G LGH ++K  ++PR VD  +    V     V
Sbjct: 402 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 461

Query: 290 ISAGSV-------NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCM 336
               +V       +SS     G+L+ WG          N +  + P  +  L   N   +
Sbjct: 462 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFCQV 521

Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYG 394
             G+        S  + + G   YG+LG      K+   P +V+  L    V  +ACG  
Sbjct: 522 ACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGAY 578

Query: 395 HSLVIVDRTNV 405
           H  V+  RT V
Sbjct: 579 HVAVLTSRTEV 589


>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Meleagris
            gallopavo]
          Length = 4334

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 3516 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 3572

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 3573 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 3632

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + TV + S++G+ +   G   YG+
Sbjct: 3633 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAV-SMDGSMVWAFGDGDYGK 3691

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 3692 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 3737

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P++V V   + V   +  I+ G+ ++   +  G +Y WG    
Sbjct: 3738 QDRLIGLPEGRARNHNRPQQVPVL--SGVFIED--IAVGAEHTLALSSTGDVYAWGSNSE 3793

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 3794 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 3827



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 135/331 (40%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+    V+  S  + ++   G++ T V+  +G  LA 
Sbjct: 3468 GKCDVYLWGAGRHGQLAEAG---RNVMVPVAAPSFSQAQQVVCGQNCTFVIQANGTVLAC 3524

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 3525 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 3583

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V + G ++
Sbjct: 3584 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLF 3629

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 3630 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 3655

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H    +    + W  G   YG+LG G    
Sbjct: 3656 ----------------LEGYQIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTA 3699

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVDIL G+ +  VACG   S+ + 
Sbjct: 3700 KSS--PQKVDILCGIGIKKVACGTQFSVALT 3728



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 130/303 (42%), Gaps = 34/303 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G +++ + +G  H      +  D   ++W H
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVSIQQISAGTSHSLAWTALPRDRQVVAW-H 746

Query: 357 AQY 359
             Y
Sbjct: 747 RPY 749



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGVSIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  +A G  + H +A+   G  Y WG N  GQLG G       PT+++ 
Sbjct: 3755 PQQVPVLSGVFIEDIAVG--AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 3812

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 3813 LQGKNIRQISAGRCHSAAWT 3832



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4846

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4028 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4084

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4085 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4144

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4203

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4204 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4250 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4305

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4306 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4339



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3980 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4036

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4095

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4096 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4141

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4167

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4168 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4211

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4212 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4240



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4267 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4324

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4325 LQGKNVRQISAGRCHSAAWT 4344



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4853

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4035 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4091

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4092 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4151

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4210

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4211 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4257 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4312

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4313 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4346



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3987 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4043

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4102

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4103 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4148

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4174

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4175 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4218

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4219 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4247



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4274 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4331

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4332 LQGKNVRQISAGRCHSAAWT 4351



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4854

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4036 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4092

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4093 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4152

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4153 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4211

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4212 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4257

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4258 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4313

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4314 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4347



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3988 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4044

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4045 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4103

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4104 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4149

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4150 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4175

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4176 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4219

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4220 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4248



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4275 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4332

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4333 LQGKNVRQISAGRCHSAAWT 4352



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
          Length = 4861

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
            guttata]
          Length = 4864

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 153/341 (44%), Gaps = 44/341 (12%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4046 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4102

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4103 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4162

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + TV +S+ +G+ +   G   YG+
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTVAVST-DGSMVWAFGDGDYGK 4221

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4222 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4267

Query: 255  FG-------GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
                     G  R  +R Q+   VP    VF  +        I+ G+ ++   +  G +Y
Sbjct: 4268 QDRLIGLPEGRARNHNRPQQ---VPLLAGVFIED--------IAVGAEHTLALSSTGDVY 4316

Query: 308  MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
             WG          + +    P  +  L G N+R + +G  H
Sbjct: 4317 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4357



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/303 (26%), Positives = 130/303 (42%), Gaps = 34/303 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+ +++ V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN-VGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G  ++ + +G  H      +  D   ++W H
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVGGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW-H 746

Query: 357 AQY 359
             Y
Sbjct: 747 RPY 749



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 133/331 (40%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S    ++   G++ T V+  +G  LA 
Sbjct: 3998 GKCDVYLWGAGRHGQLAEAG---RNVMIPAAAPSFSPAQQVVCGQNCTFVIQANGTVLAC 4054

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4113

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V + G ++
Sbjct: 4114 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLF 4159

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4185

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H    +    + W  G   YG+LG G    
Sbjct: 4186 ----------------LEGYQIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTA 4229

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVDIL G+ +  VACG   S+ + 
Sbjct: 4230 KSS--PQKVDILCGIGIKKVACGTQFSVALT 4258



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 94/377 (24%), Positives = 153/377 (40%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P + S  S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQ--------------------------------- 279
           G G +GRLGH +     +P  V D+                                   
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 280 ---RNNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVGG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++    
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI--IN 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLASSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDIINVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  +A G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4285 PQQVPLLAGVFIEDIAVG--AEHTLALSSTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4342

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4343 LQGKNVRQISAGRCHSAAWT 4362



 Score = 45.4 bits (106), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
          Length = 628

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 142/332 (42%), Gaps = 73/332 (21%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK--KAGAGRSHTVVVTEDGNSL-AF 134
           + Y+WG N  GQ     +     PT V +L   +++     +G SH + +   GN + A+
Sbjct: 97  QIYSWGYNYFGQCASNSQSIIQLPTRVEQLINMQLRVLAMASGDSHVLAIVHPGNQVYAW 156

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFTVWLSSVEGASILNAGLPQYG 193
           G N+ GQLG+G   N   P+P+      V T+ +CGA  ++ LS+     + + G    G
Sbjct: 157 GCNRWGQLGTGDQTNRATPTPIAIATPTVFTSVSCGAQHSMALSNY--GELYSWGCGTGG 214

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           + GHG++                   P+ ++AL G+ I  +A G  H+ A D +G VYTW
Sbjct: 215 RTGHGSE--------------APSLSPQVVSALVGKQITSMAGGMLHSAATDLRGSVYTW 260

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+  YG+LG+   K    P ++   ++++V+     ++ G  ++      G +Y      
Sbjct: 261 GWNKYGQLGNNTAKKHLSPNKLRDMEKHHVVK----VTCGKNHTHLLTAEGHIY------ 310

Query: 314 NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
                                                  S+G    G+LG G Y    S 
Sbjct: 311 ---------------------------------------SFGFNVCGQLGVGGYAD--SQ 329

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            PKKVD+ E  H + +  GY H+L + ++ NV
Sbjct: 330 QPKKVDLPE--HAVDIVSGYYHTLCLTNKGNV 359



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 21/221 (9%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +PT +   +     F +  C + H +A+   G  Y+WG    G+ GHG +     P 
Sbjct: 171 NRATPTPI--AIATPTVFTSVSCGAQHSMALSNYGELYSWGCGTGGRTGHGSEAPSLSPQ 228

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS- 161
           +VS L   +I     G  H+      G+   +GWNK+GQLG+ + +  + P+ +R +   
Sbjct: 229 VVSALVGKQITSMAGGMLHSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKLRDMEKH 288

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            V    CG + T  L++ EG  I + G    GQLG G               Y    +P+
Sbjct: 289 HVVKVTCGKNHTHLLTA-EG-HIYSFGFNVCGQLGVG--------------GYADSQQPK 332

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            +     E  V +  G  HT+ + +KG VY+WG+   G LG
Sbjct: 333 KVD--LPEHAVDIVSGYYHTLCLTNKGNVYSWGYMSDGALG 371



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 115/246 (46%), Gaps = 18/246 (7%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           +SP  +  LVG  I  +A G +  H  A D+ G  YTWG N+ GQLG+    +   P  +
Sbjct: 225 LSPQVVSALVGKQITSMAGGML--HSAATDLRGSVYTWGWNKYGQLGNNTAKKHLSPNKL 282

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC------ 158
            ++ K+ + K   G++HT ++T +G+  +FG+N  GQLG G   +  +P  V        
Sbjct: 283 RDMEKHHVVKVTCGKNHTHLLTAEGHIYSFGFNVCGQLGVGGYADSQQPKKVDLPEHAVD 342

Query: 159 LVSEVTATAC---GADFTVWLSSVEGASIL-----NAGLPQYGQLGHGTDNEYNTKDSSV 210
           +VS    T C     +   W    +GA  L     +   P+   L H   N  ++ DS  
Sbjct: 343 IVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIPLSHIRHNYSDSMDSYN 402

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDE 269
            + YE+           G+   K+A G  ++  + + G +Y +GFG   R+G+    +D+
Sbjct: 403 SI-YESGGEGTNPRYAKGDVAEKIAAGAWNSAIITTSGKLYCFGFGDSYRIGNGTNTEDQ 461

Query: 270 WVPRRV 275
            +P +V
Sbjct: 462 DIPCQV 467


>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
            mulatta]
          Length = 4824

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4006 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4062

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4063 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4122

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4123 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4181

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4182 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4227

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4228 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 4283

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4284 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4317



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3958 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4014

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4015 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4073

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4074 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4119

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4120 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4145

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4146 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4189

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4190 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4218



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4245 PQQIPVLAGMIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4302

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4303 LQGKNVRQISAGRCHSAAWT 4322



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|328704350|ref|XP_001948518.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Acyrthosiphon pisum]
          Length = 1053

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAG 116
           +  V   C   HC+A+   G  YTWG NE GQLG G       +PT+V+ L    I    
Sbjct: 138 MLLVQISCGYKHCMALTNHGELYTWGSNEFGQLGLGLGPGNVSKPTLVNSLVGLPISFIA 197

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
            G  H+ VV++ G    +G N  GQLG  S  +   P+ ++ + + +V   A G DF+V+
Sbjct: 198 CGGYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVF 257

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+   G     AG+  YGQLGHG              ++  +  PR +  L G T+ +V 
Sbjct: 258 LTYDGGVFTCGAGM--YGQLGHG--------------SFSNEIVPRKVLELMGSTVTQVT 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           CG  HT+  V SKG VY++G G  G+LG +   +   P+ V
Sbjct: 302 CGRRHTLTLVPSKGRVYSFGLGSVGQLGTKSSINSNTPQLV 342



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 97/333 (29%), Positives = 147/333 (44%), Gaps = 35/333 (10%)

Query: 80  YTWGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
           Y WG    G+LG G   +        IV+  S   IK    G +HT+ VTEDG   A G 
Sbjct: 2   YCWGNTINGELGLGGIEENYILSPEEIVNFESVNNIKSVACGNNHTLAVTEDGQLYACGS 61

Query: 137 NKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           N  GQLG    R +++  P V  LV  +T+ ACG   ++ L+  E   +   G    GQL
Sbjct: 62  NDFGQLGHDGCRTKLQKIPGVESLV--MTSVACGEAHSMALN--EWGQLYTWGSDSCGQL 117

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  TD                Q +P+ +  LA   +V+++CG  H +A+ + G +YTWG 
Sbjct: 118 GLETDEG-------------IQYKPKIVKTLASMLLVQISCGYKHCMALTNHGELYTWGS 164

Query: 256 GGYGRLGHREQKDEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
             +G+LG          P  V+      V  P + I+ G  +S   +  G ++ WGK   
Sbjct: 165 NEFGQLGLGLGPGNVSKPTLVNSL----VGLPISFIACGGYHSFVVSKSGAVFGWGKNDF 220

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYGELGYGPY 367
                N+      P  L  +    ++ +  G +   F+  D    + G   YG+LG+G +
Sbjct: 221 GQLGINSQTSLSSPAQLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSF 280

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +   +P+KV  L G  V  V CG  H+L +V
Sbjct: 281 SNE--IVPRKVLELMGSTVTQVTCGRRHTLTLV 311



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 109/261 (41%), Gaps = 34/261 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N+  PT +  LVG+ I F+A G    H   V   G  + WG+N+ GQLG   +     P 
Sbjct: 178 NVSKPTLVNSLVGLPISFIACG--GYHSFVVSKSGAVFGWGKNDFGQLGINSQTSLSSPA 235

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
            +  +   K+K    G   +V +T DG     G   +GQLG GS  NEI P  V  L+ S
Sbjct: 236 QLKTIRTVKVKYIAGGEDFSVFLTYDGGVFTCGAGMYGQLGHGSFSNEIVPRKVLELMGS 295

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            VT   CG   T+ L   +G  + + GL   GQL  GT +  N+    + L     P   
Sbjct: 296 TVTQVTCGRRHTLTLVPSKG-RVYSFGLGSVGQL--GTKSSINSNTPQLVLGPWLSP--- 349

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-------------EQKD 268
                +G ++++    TN    V S   +Y  G   + R+ H+             E   
Sbjct: 350 -----SGTSMIE----TNKQYVVKS---IYAGGDQCFVRVTHKSLDICPDDYRIIQESSQ 397

Query: 269 EWVPRRVDVFQRNNVLPPEAV 289
            W  +  DV   + +LP   V
Sbjct: 398 IWTVKLSDVINLSTILPENPV 418


>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
 gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
           finger domain-containing protein [Arabidopsis thaliana]
          Length = 1075

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 158/374 (42%), Gaps = 45/374 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   + +D++ +A  C   H V V  +G  ++WG    G+LGHG      +P ++  
Sbjct: 299 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDA 356

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
           L+   I+    G  H+  VT  G+   +G    G LG G+  +   P  V  L+    V+
Sbjct: 357 LNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVS 416

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + ACG   T  ++S     +   G   +G LGHG          SV +       PR + 
Sbjct: 417 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDKK-------SVFI-------PREVD 460

Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH  ++ + VP
Sbjct: 461 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
             V       V P    ++ G   +      G +Y     ++G+L N+  D   P  +  
Sbjct: 521 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEG 576

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L    +  +  G  H   + + +   +WG    G LG+G    ++S  P  V+ L+   
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDVDDRNS--PTLVESLKDKQ 634

Query: 386 VISVACGYGHSLVI 399
           V S+ACG   +  +
Sbjct: 635 VKSIACGTNFTAAV 648



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 101/243 (41%), Gaps = 66/243 (27%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG    V L + +G S  + G    G+LGHG D+                 
Sbjct: 306 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNIQ-------------- 349

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +P+ I AL    I  VACG  H+ AV   G +YTWG G +G LGH  +   WVP+RV+  
Sbjct: 350 QPKLIDALNTTNIELVACGEFHSCAVTLSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFL 409

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                +   + I+ G  +++     GQL+                               
Sbjct: 410 LEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 435

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         ++G   +G LG+G   +KS  +P++VD L+G+  +  ACG  H+  
Sbjct: 436 --------------TFGDGTFGVLGHG--DKKSVFIPREVDSLKGLRTVRAACGVWHTAA 479

Query: 399 IVD 401
           +V+
Sbjct: 480 VVE 482



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 93/215 (43%), Gaps = 39/215 (18%)

Query: 58  IRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +R V A C   H  AV               G+ +TWG  ++G+LGHG+K  +  PT V+
Sbjct: 465 LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVA 524

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVS 161
            L +    +   G S TV +T  G+    G   +GQLG+    G   N +E    +  V 
Sbjct: 525 ALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKTPNRVEGKLHKSFVE 584

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           E+   ACGA     L+S     +   G    G+LGHG  ++ N+              P 
Sbjct: 585 EI---ACGAYHVAVLTS--RTEVYTWGKGSNGRLGHGDVDDRNS--------------PT 625

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            + +L  + +  +ACGTN T AV     ++ W  G
Sbjct: 626 LVESLKDKQVKSIACGTNFTAAV----CIHRWASG 656



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 130/312 (41%), Gaps = 37/312 (11%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGA 170
           ++    G  H V+VT+ G S ++G    G+LG G   N  +P  +  L  + +   ACG 
Sbjct: 310 VQNIACGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNIQQPKLIDALNTTNIELVACG- 368

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           +F     ++ G  +   G   +G LGHG +  +              P+ R    L G  
Sbjct: 369 EFHSCAVTLSG-DLYTWGKGDFGVLGHGNEVSHWV------------PK-RVNFLLEGIH 414

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
           +  +ACG  HT  V S G ++T+G G +G LGH ++K  ++PR VD  +    V     V
Sbjct: 415 VSSIACGPYHTAVVTSAGQLFTFGDGTFGVLGHGDKKSVFIPREVDSLKGLRTVRAACGV 474

Query: 290 ISAGSV-------NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCM 336
               +V       +SS     G+L+ WG          N +  + P  +  L   N  C 
Sbjct: 475 WHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNF-CQ 533

Query: 337 DSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGY 393
            +      V   +S    + G   YG+LG      K+   P +V+  L    V  +ACG 
Sbjct: 534 VACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKT---PNRVEGKLHKSFVEEIACGA 590

Query: 394 GHSLVIVDRTNV 405
            H  V+  RT V
Sbjct: 591 YHVAVLTSRTEV 602


>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
          Length = 953

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           DI+ V   C   H +A+      + WG+N+ GQLG G D  ++  P ++  L      + 
Sbjct: 32  DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 91

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L S+ +    CG D T 
Sbjct: 92  AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 151

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 152 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTE 194

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
           +ACG  HT A V S G +Y++G GG G+LG
Sbjct: 195 IACGRQHTSAFVPSSGRIYSFGLGGNGQLG 224



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  L+ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 76  SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 133

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 134 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 193

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 194 EIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 227



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 22/176 (12%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 27  IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 86

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 87  PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 128

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 129 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 184



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
           R R I +L+   IV+VACG  H++A+     V+ WG   YG+LG   + K +  P+ +  
Sbjct: 23  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL-- 80

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
             ++ +  P   ++AG  +S      G ++ WG+ K      N+ +D   P  L  L   
Sbjct: 81  --KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 138

Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H   +  +    ++G   YG+LG+     + +  P+KV  L G  V  +A
Sbjct: 139 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTEIA 196

Query: 391 CGYGHSLVIV 400
           CG  H+   V
Sbjct: 197 CGRQHTSAFV 206



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+ L    I ++  G    H  A+  EG  +T+G    GQLGH        P  V E
Sbjct: 129 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 186

Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L    + +   GR HT   V   G   +FG   +GQLG+GS  N   P  V+
Sbjct: 187 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 238


>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
          Length = 624

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 102/365 (27%), Positives = 156/365 (42%), Gaps = 43/365 (11%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAV-DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           +L  L+   +      C   H +AV   +    +WG N  GQLG GD++ R  PT +S L
Sbjct: 129 KLPTLIKQGLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGL 188

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTAT 166
           S+       AG  H+ V+++ G   +FG    G+LG G+      P P+  LV   + + 
Sbjct: 189 SQSIPVFVAAGSQHSFVLSKFGELFSFGCGTFGRLGHGNELPSFNPRPISTLVGKHIVSV 248

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G   +  + S +GA +   G  +YGQLG GT               +    P     L
Sbjct: 249 AAGLMHSAAVDS-QGA-LYTWGWNRYGQLGLGT--------------VKKHTLPNKNKEL 292

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               IVKV CG NHT+ +D  G+VY++GF   G+LG     D   P R+D+  + N    
Sbjct: 293 ERFNIVKVVCGKNHTLVLDVNGHVYSFGFNVCGQLGIGSYTDSIKPNRIDLDLKQN---D 349

Query: 287 EAV-ISAGSVNSSCTAGGGQLYMWGKLKNN----GD---DWMYPKPLMDLSGWNLRCMDS 338
           E + I+AG  +       G +Y +G + +     GD       PK LM  S +N    DS
Sbjct: 350 EIIDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPK-LMPFSHFNHEFNDS 408

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE---GMHVISVACGYGH 395
            + +  +          + +Y           ++ +P KV  L    G   + +A G  H
Sbjct: 409 IDSYKEI----------YGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWH 458

Query: 396 SLVIV 400
           S +I 
Sbjct: 459 SAIIT 463



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 132/293 (45%), Gaps = 48/293 (16%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRP---LVGVDIRFVAAGCVSCHCVAVD 74
           K GEL   G   +  +G       GN +     RP   LVG  I  VAAG +  H  AVD
Sbjct: 208 KFGELFSFGCGTFGRLGH------GNELPSFNPRPISTLVGKHIVSVAAGLM--HSAAVD 259

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            +G  YTWG N  GQLG G   +   P    EL ++ I K   G++HT+V+  +G+  +F
Sbjct: 260 SQGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERFNIVKVVCGKNHTLVLDVNGHVYSF 319

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           G+N  GQLG GS  + I+P+ +   +    E+   A G  + V L + +G  + + G   
Sbjct: 320 GFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGY-YHVLLLTKKGC-VYSFGYIS 377

Query: 192 YGQLGHGT----------------DNEYNTKDSSVKLAY----------------EAQPR 219
            G LG G                 ++E+N    S K  Y                +  P+
Sbjct: 378 DGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDSYKEIYGEYNSDSENDINNNNAKLPPK 437

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
              +    G+  VK+A G  H+  + S G +YT+G G   RLG+  Q+D+ +P
Sbjct: 438 VVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTFGLGDNFRLGNNCQEDQDMP 490



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 122/304 (40%), Gaps = 69/304 (22%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           PT++ +     +     G SH + V+  D   L++G N+ GQLG G   N   P+P+  L
Sbjct: 131 PTLIKQ--GLIVSMIACGDSHALAVLPNDATVLSWGCNRWGQLGLGDQVNRCHPTPISGL 188

Query: 160 VSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              +    A G+  +  LS      + + G   +G+LGHG  NE  + +           
Sbjct: 189 SQSIPVFVAAGSQHSFVLSKF--GELFSFGCGTFGRLGHG--NELPSFN----------- 233

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            PR I+ L G+ IV VA G  H+ AVDS+G +YTWG+  YG+LG    K   +P +    
Sbjct: 234 -PRPISTLVGKHIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKEL 292

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
           +R N++     +  G  ++      G +Y                               
Sbjct: 293 ERFNIVK----VVCGKNHTLVLDVNGHVY------------------------------- 317

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         S+G    G+LG G Y          +D+ +   +I +A GY H L+
Sbjct: 318 --------------SFGFNVCGQLGIGSYTDSIKPNRIDLDLKQNDEIIDIAAGYYHVLL 363

Query: 399 IVDR 402
           +  +
Sbjct: 364 LTKK 367


>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
           [Albugo laibachii Nc14]
          Length = 954

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 121/265 (45%), Gaps = 30/265 (11%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           RP++ +        C + H VA+   G  Y+WG  E G+LGHG+   R+ P  +  L ++
Sbjct: 296 RPIIHI-------ACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRH 348

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATA 167
           +I+    G SHT VV++      FG  ++G+LG G  +    P  V         +    
Sbjct: 349 RIEYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTPQEVPTWGFRKQRIIKVV 408

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
           CG +FT+ L S+EG  + + G    GQ G G                + +  P  I  L 
Sbjct: 409 CGWNFTIAL-SLEG-RVFSWGKQSEGQCGLG-------------FCDQDELSPCLIEKLL 453

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD--VFQRNNVLP 285
              IV VACG  H++A+ S+  V +WG G YG+LG R    +  P  +D  +F      P
Sbjct: 454 DNRIVDVACGYTHSLALTSQHEVLSWGLGEYGQLG-RGIVYQPSPESIDQSLFACEGGHP 512

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWG 310
               I  G+ +S  TAG   LY WG
Sbjct: 513 QR--IYCGAFHSIITAGSKILYAWG 535



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 110/254 (43%), Gaps = 30/254 (11%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +   ACG +  ++LSS              G +    D+  +T + +  L      +   
Sbjct: 242 IAEIACGGNHILYLSSA-------------GDVYSSEDHAISTTEPTNMLQTPQLVKELT 288

Query: 223 I-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
           +  AL    I+ +ACG  H+VA+ S G VY+WG G  GRLGH E +D  VPR++    R+
Sbjct: 289 LEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRH 348

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLR--- 334
            +      +S G  +++  +    ++ +G+ +N     GD   +  P  ++  W  R   
Sbjct: 349 RI----EYVSCGGSHTAVVSDQNLVFTFGRGRNGRLGLGDTKCHDTP-QEVPTWGFRKQR 403

Query: 335 ---CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
               +   N    +  +    SWG    G+ G G +  +    P  ++ L    ++ VAC
Sbjct: 404 IIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLG-FCDQDELSPCLIEKLLDNRIVDVAC 462

Query: 392 GYGHSLVIVDRTNV 405
           GY HSL +  +  V
Sbjct: 463 GYTHSLALTSQHEV 476



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 87/382 (22%), Positives = 160/382 (41%), Gaps = 46/382 (12%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            +L++P ++  L G  I  +A G    H + +   G  Y+   +        + +Q   P
Sbjct: 226 NSLLTPQKVDVLPGQSIAEIACG--GNHILYLSSAGDVYSSEDHAISTTEPTNMLQT--P 281

Query: 102 TIVSELSKYK------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
            +V EL+  K      I     G  H+V +T  G   ++G  + G+LG G +R+   P  
Sbjct: 282 QLVKELTLEKALHRRPIIHIACGAKHSVALTSAGEVYSWGSGEDGRLGHGEMRDRNVPRK 341

Query: 156 VRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           +  L+   +   +CG   T  +S  +   +   G  + G+LG G    ++T         
Sbjct: 342 IMALLRHRIEYVSCGGSHTAVVS--DQNLVFTFGRGRNGRLGLGDTKCHDT--------- 390

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVP 272
              P+         + I+KV CG N T+A+  +G V++WG    G+  LG  +Q DE  P
Sbjct: 391 ---PQEVPTWGFRKQRIIKVVCGWNFTIALSLEGRVFSWGKQSEGQCGLGFCDQ-DELSP 446

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--GKLKNNGDDWMY-PKP----- 324
             ++    N ++     ++ G  +S       ++  W  G+    G   +Y P P     
Sbjct: 447 CLIEKLLDNRIVD----VACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPSPESIDQ 502

Query: 325 -LMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            L    G + + +  G  H  + A S  + +WG   YG  G G    +   +P++ D   
Sbjct: 503 SLFACEGGHPQRIYCGAFHSIITAGSKILYAWGLNSYGACGLGHTLNRD--IPERNDFFA 560

Query: 383 GMHV-ISVACGYGHSLVI-VDR 402
            +   + + CG+ +++ + VD+
Sbjct: 561 NIDTDVVLCCGHKYTIALEVDK 582


>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
 gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
          Length = 1080

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 159/380 (41%), Gaps = 46/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+ ++  G    H   V  +G  +TWG +  G+LGHG      +P 
Sbjct: 250 DMLIPKPLESDVVLDVNYIEPGV--SHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPR 307

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  L+   +     G  HT  V+  G+   +G   H  G LG G+  +   P  V   +
Sbjct: 308 LVDSLAITSVSFVACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPL 367

Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              +V + ACGA  T  ++S     +   G    G LGHG D E         +AY    
Sbjct: 368 EGHQVVSIACGAWHTALITS--NGKLFTFGDGTLGVLGHG-DRE--------SVAY---- 412

Query: 219 RPRAIAALAGETIVKVACGTNHTVAV-------------DSKGYVYTWGFGGYGRLGHRE 265
            P+ +  L+G   VKVACG  HT A+              S   ++TWG G   RLGH  
Sbjct: 413 -PKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHAN 471

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMY 321
           ++    P  V      N L    V    S+  + TA G    M    +G+L N   D   
Sbjct: 472 KETYLQPTCVAALADYNFL---QVACGHSLTVALTASGHVFTMGSKAYGQLGNPTSDGKV 528

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D L G  +  +  G  H   + + S   +WG    G LG+G    + +  P  V+
Sbjct: 529 PILVRDKLQGETVEEISCGTHHVAVLTSRSELYTWGRGANGRLGHGDIEDQKT--PILVE 586

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV ++ACG   +  I
Sbjct: 587 ALKERHVKNIACGANFTTCI 606



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 87/302 (28%), Positives = 129/302 (42%), Gaps = 18/302 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           + GE+   G    D+ GR     D +   P  +  L    + FVA  C   H  AV + G
Sbjct: 280 RQGEIFTWGE---DSGGRLGHGFDKDYGKPRLVDSLAITSVSFVA--CGEYHTCAVSISG 334

Query: 78  RCYTWG--RNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
             YTWG   +  G LGHG  +    P  V+  L  +++     G  HT ++T +G    F
Sbjct: 335 DLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTALITSNGKLFTF 394

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G    G LG G   +   P  ++ L   +    ACG   T  +  V   S  ++      
Sbjct: 395 GDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAIIEVNDQSGSSSNTSSSK 454

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           +L    D +      + K  Y    +P  +AALA    ++VACG + TVA+ + G+V+T 
Sbjct: 455 KLFTWGDGDQYRLGHANKETYL---QPTCVAALADYNFLQVACGHSLTVALTASGHVFTM 511

Query: 254 GFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           G   YG+LG+    D  VP  V D  Q   V      IS G+ + +      +LY WG+ 
Sbjct: 512 GSKAYGQLGN-PTSDGKVPILVRDKLQGETV----EEISCGTHHVAVLTSRSELYTWGRG 566

Query: 313 KN 314
            N
Sbjct: 567 AN 568



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 32/305 (10%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
           G SH  +VT  G    +G +  G+LG G  ++  +P  V  L ++ V+  ACG   T  +
Sbjct: 271 GVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSVSFVACGEYHTCAV 330

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           S          G    G LGHGTD  ++             P+ R    L G  +V +AC
Sbjct: 331 SISGDLYTWGDGTHNAGILGHGTDVSHSI------------PK-RVTGPLEGHQVVSIAC 377

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP-------PEAV 289
           G  HT  + S G ++T+G G  G LGH +++    P+ + +   +  +          A+
Sbjct: 378 GAWHTALITSNGKLFTFGDGTLGVLGHGDRESVAYPKELQLLSGHKAVKVACGVWHTAAI 437

Query: 290 ISAGS--VNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGN- 340
           I       +SS T+   +L+ WG          N + ++ P  +  L+ +N   +  G+ 
Sbjct: 438 IEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALADYNFLQVACGHS 497

Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +   + A     + G   YG+LG      K   + +  D L+G  V  ++CG  H  V+ 
Sbjct: 498 LTVALTASGHVFTMGSKAYGQLGNPTSDGKVPILVR--DKLQGETVEEISCGTHHVAVLT 555

Query: 401 DRTNV 405
            R+ +
Sbjct: 556 SRSEL 560



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 16/178 (8%)

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +  G +H   V  +G ++TWG    GRLGH   KD   PR VD     +V    + ++ G
Sbjct: 268 IEPGVSHIALVTRQGEIFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITSV----SFVACG 323

Query: 294 SVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM---DLSGWNLRCMDSGNMHH- 343
             ++   +  G LY WG   +N      G D  +  P      L G  +  +  G  H  
Sbjct: 324 EYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGAWHTA 383

Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            + ++    ++G    G LG+G   ++S A PK++ +L G   + VACG  H+  I++
Sbjct: 384 LITSNGKLFTFGDGTLGVLGHG--DRESVAYPKELQLLSGHKAVKVACGVWHTAAIIE 439


>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
 gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
 gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
          Length = 1057

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 159/382 (41%), Gaps = 42/382 (10%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+ +VA G    H   V  +   +TWG    G+LGHG      +P 
Sbjct: 248 DILVPKPLESNVMLDVSYVACGVK--HAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPR 305

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  LS   ++    G  HT  +T  G+   +G   H  G LG GS  +   P  V   +
Sbjct: 306 LVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 365

Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              +V+A +CG   T  ++S     +   G   +G LGHG                E   
Sbjct: 366 EGLQVSAVSCGTWHTALITS--SGKLYTFGDGTFGVLGHGN--------------RETIS 409

Query: 219 RPRAIAALAGETIVKVACGTNHTVAV---------DSKGYVYTWGFGGYGRLGHREQ--- 266
            P+ + +L G   + V+CG  HT AV          S G ++TWG G   RLGH ++   
Sbjct: 410 YPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK 469

Query: 267 -KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
            K   VP  +D      V      I   +     TAG     ++G+L N  +D  YP+ +
Sbjct: 470 LKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSS---VYGQLGNPNNDGRYPRLV 526

Query: 326 MD-LSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            + L G  +  +  G  H  V   S  + +WG    G LG+G    + +  P  V+ L  
Sbjct: 527 EEKLGGGGVVEVACGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKT--PTFVEALRD 584

Query: 384 MHVISVACGYGHSLVIVDRTNV 405
             V  +ACG G +  I    +V
Sbjct: 585 RSVKRIACGSGFTAAICQHKSV 606


>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
            gorilla gorilla]
          Length = 4502

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 3684 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 3740

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 3741 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 3800

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 3801 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 3859

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 3860 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 3905

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 3906 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 3961

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 3962 GQLGLGHTNHVREPTVVTGLQGKNVRQISAGRCH 3995



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3636 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3692

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 3693 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 3751

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 3752 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 3797

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 3798 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 3823

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 3824 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 3867

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 3868 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 3896



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 3923 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTVVTG 3980

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 3981 LQGKNVRQISAGRCHSAAWT 4000



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
          Length = 947

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 21/210 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKA 115
           DI+ V   C   H +A+      + WG+N+ GQLG G D  ++  P ++  L      + 
Sbjct: 26  DIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGIPFMQV 85

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+ V+T  G    +G NK GQLG     +   P+ ++ L S+ +    CG D T 
Sbjct: 86  AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTA 145

Query: 175 WLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
            L+   G     AG   YGQLGH  T +E N               PR +  L G  + +
Sbjct: 146 ALTKEGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTE 188

Query: 234 VACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
           +ACG  HT A V S G +Y++G GG G+LG
Sbjct: 189 IACGRQHTSAFVPSSGRIYSFGLGGNGQLG 218



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  L+ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 70  SPQLLKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 127

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 128 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 187

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 188 EIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 221



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 22/176 (12%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 21  IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 80

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 81  PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 122

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 123 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 178



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 52/190 (27%), Positives = 88/190 (46%), Gaps = 14/190 (7%)

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDV 277
           R R I +L+   IV+VACG  H++A+     V+ WG   YG+LG   + K +  P+ +  
Sbjct: 17  RIRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLL-- 74

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
             ++ +  P   ++AG  +S      G ++ WG+ K      N+ +D   P  L  L   
Sbjct: 75  --KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQ 132

Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H   +  +    ++G   YG+LG+     + +  P+KV  L G  V  +A
Sbjct: 133 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTEIA 190

Query: 391 CGYGHSLVIV 400
           CG  H+   V
Sbjct: 191 CGRQHTSAFV 200



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+ L    I ++  G    H  A+  EG  +T+G    GQLGH        P  V E
Sbjct: 123 PNLLKSLRSQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 180

Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L    + +   GR HT   V   G   +FG   +GQLG+GS  N   P  V+
Sbjct: 181 LMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 232


>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
            alkenivorans AK-01]
 gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
            alkenivorans AK-01]
          Length = 1525

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/355 (28%), Positives = 171/355 (48%), Gaps = 46/355 (12%)

Query: 60   FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD--KIQRDRPTIVSELSKYKIKKAGA 117
             VAAG      +A+  +G  ++WG N  GQLG G    +    PT V  L      K  A
Sbjct: 985  MVAAG--GNFSLALKTDGSLWSWGDNGTGQLGLGLGQSVNVFTPTKVDALPP--AAKIAA 1040

Query: 118  GRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
            G +H + +  DG+  ++G+N  GQLG   SG+   +  P  +   +S V A ACG   + 
Sbjct: 1041 GDNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKNRPQKINA-ISNVAAIACGGSHS- 1098

Query: 175  WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
             L+     S+ + G   YGQLG G DN   T              P+ + A++   +  +
Sbjct: 1099 -LAVARDGSLWSWGYNYYGQLGLG-DNYSKTT-------------PQKVNAIS--NVAAI 1141

Query: 235  ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            A G  +++A+   G V++WG    G+LG  + +D   P++V+V    NV    A I+AG 
Sbjct: 1142 AAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLS--NV----AAIAAGE 1195

Query: 295  VNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGA 347
             +S      G ++ WG+        ++ DD   P+P+  +S  N++ + +GN H F +  
Sbjct: 1196 DHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTIS--NIKAIAAGNSHSFAISE 1253

Query: 348  DSSCISWGHAQYGELGYGPYGQKSSA-MPKKVDILEGMHVISVACGYGHSLVIVD 401
            +    +WG+   G+LG G  G  ++   P+KV ++   +V+ ++ G  HSL + +
Sbjct: 1254 EGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NVVGLSGGNYHSLALTE 1306



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 128/268 (47%), Gaps = 31/268 (11%)

Query: 48  TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           T  RP     I  VAA  C   H +A+  +G  ++WG N  GQLG GD + +  P  V+ 
Sbjct: 586 TENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNA 645

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           LS   +    AG  H++ +T DG+  ++G N +GQLG G   +   P  V   +S V A 
Sbjct: 646 LS--NVVAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKVNA-ISNVVAI 702

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           A G   ++ L+     S+ + G    GQLG G +++ NT            P+P    + 
Sbjct: 703 AAGYRHSLALT--RDGSVWSWGNNTRGQLGLGDNDDRNT------------PQPVTTIS- 747

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEWVPRRVDVFQRNNV 283
               I  +A G N+++A+  +G V+ WG+   G+LG   H    DE  P++V V    NV
Sbjct: 748 ---NIKAIAVGNNYSIAISEEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVIS--NV 802

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           +     +SAGS +S      G L+ WG 
Sbjct: 803 VG----LSAGSSHSIALTEDGALWAWGN 826



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 102/341 (29%), Positives = 142/341 (41%), Gaps = 64/341 (18%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +A+  +G  + WGRN+  QLG GD I R  P     +S   I    AGR  ++ +  D
Sbjct: 78  HSLALKGDGTVWVWGRNDYNQLGLGDDINRLAPEQAPVVSN--IVSVAAGRLFSLALASD 135

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+  A+G N +GQLG G   N + PS    L S+V A A G D+   L++ +   +   G
Sbjct: 136 GSLWAWGGNYYGQLGMGDNDNRLTPSKTPGL-SDVAAIA-GGDYHA-LAATQSGEVWAMG 192

Query: 189 LPQYGQLGHGTDNE---------YNTK--------------DSSV-------------KL 212
              +GQLG   D+           N K              D +V              +
Sbjct: 193 RNDHGQLGFTGDHADAPVQVAGLSNVKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGI 252

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           A EA   P  IA L+   I  +A G  H +A+   G V+ WG  G G+LG  + +    P
Sbjct: 253 AGEAVATPAPIAVLS--NITAIAAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAP 310

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD---------DWMYPK 323
            RV      + L     I++G  +S      G L+ WG   NNGD         D   P 
Sbjct: 311 GRV------SSLADVTAIASGWFHSLALTSDGVLWAWG---NNGDGRLGTDATSDQSLPA 361

Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
            +  +S  N      G  H   + AD S  SWG   YG+LG
Sbjct: 362 QVSSIS--NAVSFAGGQRHSLAIAADGSVWSWGGNAYGQLG 400



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 123/268 (45%), Gaps = 31/268 (11%)

Query: 48   TRLRPLVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            T+ RP     I  VAA  C   H +AV  +G  ++WG N  GQLG GD   +  P  V+ 
Sbjct: 1075 TKNRPQKINAISNVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNA 1134

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
            +S   +    AG  +++ +T DG+  ++G N  GQLG G   +   P  V  L S V A 
Sbjct: 1135 IS--NVAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVL-SNVAAI 1191

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
            A G D ++ L+     S+ + G    GQLG   +++ NT            P+P    + 
Sbjct: 1192 AAGEDHSLALT--RDGSVWSWGRNSRGQLGLDDNDDRNT------------PQPVTTIS- 1236

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEWVPRRVDVFQRNNV 283
                I  +A G +H+ A+  +G  + WG+   G+LG        +E  P++V V    NV
Sbjct: 1237 ---NIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVIS--NV 1291

Query: 284  LPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            +     +S G+ +S      G L+ WG 
Sbjct: 1292 VG----LSGGNYHSLALTEDGALWAWGD 1315



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/240 (28%), Positives = 115/240 (47%), Gaps = 23/240 (9%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            +P ++  L  V    VA      H +A+ ++G  ++WG N  GQLG GD   R+ P  V
Sbjct: 638 TTPRKVNALSNV----VAMAAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKV 693

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           + +S   +    AG  H++ +T DG+  ++G N  GQLG G   +   P PV   +S + 
Sbjct: 694 NAIS--NVVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTT-ISNIK 750

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A A G ++++ +S  E   +   G    GQLG GT            LA E  P+   + 
Sbjct: 751 AIAVGNNYSIAIS--EEGLVWAWGYNCSGQLGIGTHG---------SLADENTPQKVIVI 799

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           +     +V ++ G++H++A+   G ++ WG    G++   E+  E++   V VFQ   V 
Sbjct: 800 S----NVVGLSAGSSHSIALTEDGALWAWGNNEAGQIA-AEEAIEYIDNPVQVFQSGEVF 854



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 129/271 (47%), Gaps = 34/271 (12%)

Query: 43   NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK---IQRD 99
            N+ +PT++  L       +AAG    H +A+  +G  ++WG N  GQLG G       ++
Sbjct: 1022 NVFTPTKVDALPPA--AKIAAG--DNHALALAPDGSVWSWGYNSDGQLGLGSSGTYSTKN 1077

Query: 100  RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            RP  ++ +S   +     G SH++ V  DG+  ++G+N +GQLG G   ++  P  V   
Sbjct: 1078 RPQKINAIS--NVAAIACGGSHSLAVARDGSLWSWGYNYYGQLGLGDNYSKTTPQKVNA- 1134

Query: 160  VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +S V A A G  +++ L+     S+ + G    GQLG G + + NT              
Sbjct: 1135 ISNVAAIAAGEYYSLALT--RDGSVWSWGDNSDGQLGLGDNEDRNT-------------- 1178

Query: 220  PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            P+ +  L+   +  +A G +H++A+   G V++WG    G+LG  +  D   P+ V    
Sbjct: 1179 PQKVEVLS--NVAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTIS 1236

Query: 280  RNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
              N+      I+AG+ +S   +  G  + WG
Sbjct: 1237 --NI----KAIAAGNSHSFAISEEGLAWAWG 1261



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 120/270 (44%), Gaps = 35/270 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRP 101
           N ++P++   L   D+  +A G    H +A    G  +  GRN+ GQLG  GD    D P
Sbjct: 156 NRLTPSKTPGLS--DVAAIAGG--DYHALAATQSGEVWAMGRNDHGQLGFTGD--HADAP 209

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLV 160
             V+ LS   +K   AG   ++ +  DG   A+G N+  QLG+G     +  P+P+  L 
Sbjct: 210 VQVAGLSN--VKSVAAGEFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVL- 266

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           S +TA A G    + L+  E  S+   G    GQLG G               +E    P
Sbjct: 267 SNITAIAAGRRHAMALA--EDGSVWAWGANGSGQLGFGD--------------FETPKAP 310

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
             +++LA   +  +A G  H++A+ S G ++ WG  G GRLG     D+ +P +V     
Sbjct: 311 GRVSSLA--DVTAIASGWFHSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISN 368

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                     + G  +S   A  G ++ WG
Sbjct: 369 ------AVSFAGGQRHSLAIAADGSVWSWG 392



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 161/356 (45%), Gaps = 48/356 (13%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIVSELSKYKIKKAGA 117
            VAAG      +A+  +G  ++WG N  GQLG G     D   PT V  L       AG 
Sbjct: 496 MVAAG--GGFSLALKTDGSVWSWGNNGSGQLGLGLGENDDVFTPTNVDALPLAASIAAGG 553

Query: 118 GRSHTVVVTEDGNSLAFGWNK---HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
           G  H + +  DG+  ++G N     G    G+   E  P  +   +S V A ACG   ++
Sbjct: 554 G--HALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINA-ISNVAAIACGGSHSL 610

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+     S  + G   YGQLG G DN   T              PR + AL+   +V +
Sbjct: 611 ALA--RDGSFWSWGYNYYGQLGLG-DNVSKTT-------------PRKVNALS--NVVAM 652

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A G  H++A+   G +++WG   YG+LG  +      PR+V      N +     I+AG 
Sbjct: 653 AAGDRHSLALTLDGSLWSWGDNTYGQLGLGDNDHRNTPRKV------NAISNVVAIAAGY 706

Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            +S      G ++ WG        L +N DD   P+P+  +S  N++ +  GN +    +
Sbjct: 707 RHSLALTRDGSVWSWGNNTRGQLGLGDN-DDRNTPQPVTTIS--NIKAIAVGNNYSIAIS 763

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSA-MPKKVDILEGMHVISVACGYGHSLVIVD 401
           +   + +WG+   G+LG G +G  +    P+KV ++   +V+ ++ G  HS+ + +
Sbjct: 764 EEGLVWAWGYNCSGQLGIGTHGSLADENTPQKVIVIS--NVVGLSAGSSHSIALTE 817



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 163/384 (42%), Gaps = 58/384 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P R+  L   D+  +A+G    H +A+  +G  + WG N  G+LG      +  P  VS
Sbjct: 309 APGRVSSLA--DVTAIASGWF--HSLALTSDGVLWAWGNNGDGRLGTDATSDQSLPAQVS 364

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            +S   +  AG G+ H++ +  DG+  ++G N +GQLG  S+      +PV  L S    
Sbjct: 365 SISN-AVSFAG-GQRHSLAIAADGSVWSWGGNAYGQLGVESLTPASVLTPVHTLYS---- 418

Query: 166 TACGADF------------TVWLSSVEGASILNAG-----LPQYGQLGHGTDNEYNTKDS 208
              G DF             +W    +G   L+       +   GQ     D   +  D 
Sbjct: 419 ---GEDFHLFYDTDGDGAANIWDDDDDGDGFLDESDNCPCVSNPGQEDEDGDGTGDFCDG 475

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG--FGGYGRLGHREQ 266
                ++ QP         G     VA G   ++A+ + G V++WG    G   LG  E 
Sbjct: 476 CPGDFFKIQPGFSGC----GNPNPMVAAGGGFSLALKTDGSVWSWGNNGSGQLGLGLGEN 531

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK----LKNNGDDWMY- 321
            D + P  VD       LP  A I+AG  ++   A  G ++ WG+        G    Y 
Sbjct: 532 DDVFTPTNVD------ALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYS 585

Query: 322 ----PKPLMDLSGWNLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYGPYGQKSSAMPK 376
               P+ +  +S  N+  +  G  H    A D S  SWG+  YG+LG G    K++  P+
Sbjct: 586 TENRPQKINAIS--NVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTT--PR 641

Query: 377 KVDILEGMHVISVACGYGHSLVIV 400
           KV+ L   +V+++A G  HSL + 
Sbjct: 642 KVNALS--NVVAMAAGDRHSLALT 663



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 9/121 (7%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P ++  L   ++  +AAG    H +A+  +G  ++WGRN RGQLG  D   R+ P  V+
Sbjct: 1178 TPQKVEVLS--NVAAIAAG--EDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVT 1233

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSE 162
             +S   IK   AG SH+  ++E+G + A+G+N  GQLG   SGS+ NE  P  V+ + + 
Sbjct: 1234 TIS--NIKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKVISNV 1291

Query: 163  V 163
            V
Sbjct: 1292 V 1292



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 97/207 (46%), Gaps = 24/207 (11%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
           +++ VAAG      +A+  +G  + WG NE  QLG G   +    P  ++ LS   I   
Sbjct: 217 NVKSVAAG--EFFSLALKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSN--ITAI 272

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
            AGR H + + EDG+  A+G N  GQLG G       P  V  L ++VTA A G     W
Sbjct: 273 AAGRRHAMALAEDGSVWAWGANGSGQLGFGDFETPKAPGRVSSL-ADVTAIASG-----W 326

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
             S+  A   +  L  +G  G G      T D S+         P  +++++    V  A
Sbjct: 327 FHSL--ALTSDGVLWAWGNNGDGRLGTDATSDQSL---------PAQVSSIS--NAVSFA 373

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLG 262
            G  H++A+ + G V++WG   YG+LG
Sbjct: 374 GGQRHSLAIAADGSVWSWGGNAYGQLG 400



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 55/108 (50%), Gaps = 10/108 (9%)

Query: 51   RPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTIVSE 106
            +P+  + +I+ +AAG  + H  A+  EG  + WG N  GQLG    G     + P  V  
Sbjct: 1230 QPVTTISNIKAIAAG--NSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLANENTPQKVKV 1287

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS--GSIRNEIE 152
            +S   +     G  H++ +TEDG   A+G N  GQ+GS  G  +N ++
Sbjct: 1288 ISN--VVGLSGGNYHSLALTEDGALWAWGDNDDGQIGSTGGDRKNPVQ 1333


>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
          Length = 1099

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 160/377 (42%), Gaps = 49/377 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ +A  C   H   V  +G  ++WG    G+LGHG       P ++  
Sbjct: 296 PKALESAVVLDVQNIA--CGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIES 353

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
           LS   I+    G  HT  VT  G+   +G   +N +G LG G+  +   P  V   +   
Sbjct: 354 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVPKRVNGPLEGI 412

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            V++ +CG   T  ++S     +   G   +G LGHG          SV L       PR
Sbjct: 413 HVSSISCGPWHTAVVTS--SGQLFTFGDGTFGVLGHG-------DRKSVSL-------PR 456

Query: 222 AIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDE 269
            I +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH +++ +
Sbjct: 457 EIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESK 516

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKP 324
            VP RV      N       ++ G   +   +  G +Y     ++G L N   D   P P
Sbjct: 517 LVPTRVVTLDEPNF----CQVACGHSMTVALSRLGHVYTMGSCVYGHLGNTQADGKLPTP 572

Query: 325 LM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
           +   LS   +  +  G  H   + + +   +WG    G LG+G    +++  P  V+ L+
Sbjct: 573 VEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGCLGHGDTNDRNT--PTLVEALK 630

Query: 383 GMHVISVACGYGHSLVI 399
              V S+ACG   +  I
Sbjct: 631 DKQVKSIACGTNFTAAI 647



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+A+ +     +  +ACG  H   V  +G V++WG    GRLGH    D   P+ ++   
Sbjct: 296 PKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPHPKLIESLS 355

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG       L  +G+    W+  +    L G
Sbjct: 356 NTNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG 411

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H  V   S    ++G   +G LG+G   +KS ++P++++ L+G+  +  
Sbjct: 412 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHG--DRKSVSLPREIESLKGLRTVQA 469

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 470 ACGVWHTAAVVE 481



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 79/330 (23%), Positives = 126/330 (38%), Gaps = 33/330 (10%)

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
           G K+    P  +       ++    G  H  +VT+ G   ++G    G+LG G   +   
Sbjct: 288 GVKMDSLLPKALESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESGGRLGHGVDSDVPH 347

Query: 153 PSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           P  +  L  + +   ACG   T  ++          G   YG LGHG    +        
Sbjct: 348 PKLIESLSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWV------ 401

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
                 P+ R    L G  +  ++CG  HT  V S G ++T+G G +G LGH ++K   +
Sbjct: 402 ------PK-RVNGPLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSL 454

Query: 272 PRRVDVFQ-RNNVLPPEAVISAGSV-------NSSCTAGGGQLYMWGKLKN------NGD 317
           PR ++  +    V     V    +V       +SS     G+L+ WG          + +
Sbjct: 455 PREIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 514

Query: 318 DWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
             + P  ++ L   N   +  G+ M   +       + G   YG LG     Q    +P 
Sbjct: 515 SKLVPTRVVTLDEPNFCQVACGHSMTVALSRLGHVYTMGSCVYGHLG---NTQADGKLPT 571

Query: 377 KVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
            V+  L    V  +ACG  H  V+  RT V
Sbjct: 572 PVEGKLSKSFVEEIACGAYHVAVLTSRTEV 601


>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
          Length = 2441

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 1623 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 1679

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 1680 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 1739

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 1740 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 1798

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 1799 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 1844

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 1845 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 1900

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 1901 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 1934



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 1575 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 1631

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 1632 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 1690

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 1691 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 1736

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 1737 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 1762

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 1763 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 1806

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 1807 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 1835



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 1862 PQQIPVLAGVIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 1919

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 1920 LQGKNVRQISAGRCHSAAWT 1939


>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
            anubis]
          Length = 3314

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 2496 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 2552

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 2553 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2612

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 2613 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 2671

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 2672 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2717

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 2718 QDRLIGLPEGRARNHNRPQQIPVLAGMII----EDVAVGAEHTLALASNGDVYAWGSNSE 2773

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 2774 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 2807



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 2448 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 2504

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 2505 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 2563

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 2564 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 2609

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 2610 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 2635

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 2636 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 2679

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 2680 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 2708



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L G+ I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 2735 PQQIPVLAGMIIEDVAVG--AEHTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 2792

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 2793 LQGKNVRQISAGRCHSAAWT 2812


>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
 gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
            Full=HECT domain and RCC1-like domain-containing protein
            1; AltName: Full=p532; AltName: Full=p619
 gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
 gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
            RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
            sapiens]
          Length = 4861

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|297828852|ref|XP_002882308.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297328148|gb|EFH58567.1| ankyrin repeat family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1081

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 151/377 (40%), Gaps = 71/377 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
           P R+  L G  I+ V+A     H VA+   G  YTWG    G+LGH       G      
Sbjct: 177 PGRVDSLHGCFIKLVSAA--KFHSVAISSHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 234

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
              ++S L   ++K   A + HTV+ TE G+   +G N+ GQLG  S+  +  P  V  L
Sbjct: 235 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 294

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +++ A +     T  +S  E   +   G  + GQLG+GT N  +               
Sbjct: 295 KAKIVAVSAANKHTAVVS--ECGEVFTWGCNREGQLGYGTSNSASNYS------------ 340

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+    +A    HT+ + + G VYTW        GHR       PRR+ +  
Sbjct: 341 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHR----LVTPRRIIISR 388

Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
                      F R   L   A I+AG V+S   A  G L+ W                 
Sbjct: 389 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGALFYWVS--------------- 432

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHA--QYGELGYGPYGQKSSAMPKKVDILEG 383
             S  N RC    ++H   V + S+   W  A    GE+ Y   G+    MP  +  L  
Sbjct: 433 --SDSNFRCQQLHSLHGKTVVSISAGKYWASAVTSTGEV-YMWDGKDGKDMPPSLSRLHN 489

Query: 384 M-HVISVACGYGHSLVI 399
           +    +VA G  H LV+
Sbjct: 490 LKRATTVAVGETHLLVV 506



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 29/202 (14%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           Q  P  + +L G  I  V+    H+VA+ S G VYTWGFG  GRLGH E          D
Sbjct: 174 QKVPGRVDSLHGCFIKLVSAAKFHSVAISSHGEVYTWGFGRGGRLGHPE---------FD 224

Query: 277 VFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGDD 318
           +   +  V+ P  VIS           A   ++     GG +Y WG  +       + D 
Sbjct: 225 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 284

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P+ +  L    +  + + N H  V ++     +WG  + G+LGYG     S+  P+ 
Sbjct: 285 QATPRKVTSLKA-KIVAVSAANKHTAVVSECGEVFTWGCNREGQLGYGTSNSASNYSPRL 343

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           VD L+G    ++A    H+LV+
Sbjct: 344 VDYLKGKVFTAIASSKYHTLVL 365



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 31/246 (12%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G++  +  P  V  L    IK   A + H+V ++  G    +
Sbjct: 151 VATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISSHGEVYTW 210

Query: 135 GWNKHGQLGSGSIRNEIEPSPV---RCLVS-----EVTATACGADFTVWLSSVEGASILN 186
           G+ + G+LG          + V   R ++S      V A A     TV   + EG  +  
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYT 268

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + GQLG+ +               + Q  PR + +L  + IV V+    HT  V  
Sbjct: 269 WGSNREGQLGYTS--------------VDTQATPRKVTSLKAK-IVAVSAANKHTAVVSE 313

Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            G V+TWG    G+LG+        + PR VD + +  V      I++   ++      G
Sbjct: 314 CGEVFTWGCNREGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDG 369

Query: 305 QLYMWG 310
           ++Y WG
Sbjct: 370 EVYTWG 375



 Score = 42.7 bits (99), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 21/164 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++WG G   +LG   Q  + VP RVD      +     ++SA   +S   +  G++Y W
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISSHGEVYTW 210

Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
           G          +   +        P   +SG   R +   +   HH V A       +WG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 270

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             + G+LGY      + A P+KV  L+   +++V+    H+ V+
Sbjct: 271 SNREGQLGYTSVD--TQATPRKVTSLKA-KIVAVSAANKHTAVV 311


>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
          Length = 4861

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4354



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359



 Score = 45.4 bits (106), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
            domestica]
          Length = 4790

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 3972 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4028

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4029 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFG 4088

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4089 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4147

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4148 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4193

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      I+ G+ ++   A  G +Y WG    
Sbjct: 4194 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDIAVGAEHTLALASTGDVYAWGSNSE 4249

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4250 GQLGLGHTNHVREPTLITILQGKNIRQISAGRCH 4283



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3924 GKCDVYLWGAGRHGQLAEAG---RNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3980

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 3981 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4039

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +++++CG  H+  V S G ++
Sbjct: 4040 YGKLGHGNSDR--------------QRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLF 4085

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4086 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4111

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4112 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4155

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4156 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4184



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G  ++ + +G  H      +  D   ++W  
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHR 747

Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
               +L    +    S + +  D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGVAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/283 (25%), Positives = 121/283 (42%), Gaps = 25/283 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             G+LG+G   +     PK ++ L+GM +  V  G   SL + 
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALT 630



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  +A G    H +A+   G  Y WG N  GQLG G       PT+++ 
Sbjct: 4211 PQQIPVLAGVVIEDIAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITI 4268

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4269 LQGKNIRQISAGRCHSAAWT 4288



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|366163660|ref|ZP_09463415.1| YD repeat protein [Acetivibrio cellulolyticus CD2]
          Length = 2438

 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 95/331 (28%), Positives = 148/331 (44%), Gaps = 37/331 (11%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           +A+  +G    WG N+ GQLG G+ ++  +   + +L +Y IK+  AG  H V +  DG 
Sbjct: 623 LALANDGSVKVWGNNDYGQLGLGNTLEYKKIATIPDL-RY-IKQLDAGTDHAVALLNDGT 680

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
              +G N +GQLG G +     P+ V  L S V   A G DFT+ L  +E  ++   G  
Sbjct: 681 VKVWGKNDYGQLGLGDLDKRTSPTKVEGL-SGVKQIAAGQDFTLVL--MEDGTVKGWGSN 737

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
            YGQL          K S VK+       P+         + ++A G N   A+ + G V
Sbjct: 738 DYGQL---------CKPSDVKIVKTPIDLPQL------SDVKEIAVGGNCAFAILNNGTV 782

Query: 251 YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             WG   YG+LG  ++ +   P +V        L     IS    N+      G + +WG
Sbjct: 783 KAWGDNDYGQLGLGDKLERSTPTQV------TGLSSVKKISVCWSNAIALLNDGTVKVWG 836

Query: 311 KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQ 369
            + N    +  P  + +L   N++ +  G  ++FV   D S   WG    G LG G   Q
Sbjct: 837 HINN----YTLPTSVGELK--NVKQVGVGVYNYFVLLQDGSVKGWGSNTLGSLGVGDTEQ 890

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           ++  +P K+D +EG     +  G  HS V++
Sbjct: 891 RT--LPTKIDGIEGAK--QLINGNAHSFVLM 917


>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
 gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
          Length = 1765

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/286 (26%), Positives = 128/286 (44%), Gaps = 43/286 (15%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHT 122
           GC   H VA+   G  + WG N+ GQLG G++++ D+   V  +     I++   G  H 
Sbjct: 507 GCGENHTVALTGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRRIACGSKHC 566

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
           + V + G+  A+G N  GQLG G +R   EP+ V  L  +     CG D++  ++S  GA
Sbjct: 567 LAVAQYGDVFAWGANDDGQLGLGVLRPSFEPAAVTAL-RQAIDVFCGDDYSACITSNGGA 625

Query: 183 SILNAGL--------------PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
             ++  L               + G+LG G D    +  +  K+ +              
Sbjct: 626 QTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPFSV------------ 673

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
             +   + GT+H +A+ ++G  Y WG G YGRLG     + + P + D         P+ 
Sbjct: 674 -PVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTANAYAPTKCDF--------PKG 724

Query: 289 V----ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY--PKPLMDL 328
           V    ++AG+ +S   +  G L++WGK ++      Y  P+  M L
Sbjct: 725 VRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSPRIFMQL 770



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 94/381 (24%), Positives = 147/381 (38%), Gaps = 74/381 (19%)

Query: 77  GRCYTWGRNERGQLGH-------GDKIQRD---------------RPTIVSELSKYKIKK 114
           G+ YT+G   RG+LG+       G + Q D               +P  V    K KI +
Sbjct: 126 GKVYTFGLGNRGRLGYPKSKAEGGARQQGDDAGDGQEDGPSWFTPKPARVRFRDKCKIAR 185

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-------------- 160
              G  HT+ +++ G   A+G   +G LG G   +    SPVR L+              
Sbjct: 186 ISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAY--SPVRVLLGSEKGSGKKKENLG 243

Query: 161 ------SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V  T C A     ++     ++   G    G+LG G    +N    S     
Sbjct: 244 IGRRGTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLG----HNRGSLS----- 294

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
                P  +  +    +V V+ G +H+  +D +G +YTWG GG+GRLGH +Q +  VPR+
Sbjct: 295 -----PAVVDYILDRDVVFVSAGDSHSACIDRQGVLYTWGSGGFGRLGHGDQGEIPVPRK 349

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG---------KLKNNGDDWMYPKPL 325
           V+ F    VL     ++ G+ ++      G ++ WG              G     PK L
Sbjct: 350 VEGFGGVPVLQ----VACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHL 405

Query: 326 MDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGM 384
            D+    L           V      + WG      LG+G   Q++   PK V D+   M
Sbjct: 406 SDIEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHG--DQQNQPFPKYVADLRNRM 463

Query: 385 HVISVACGYGHSLVIVDRTNV 405
           +V  +    G S +  D ++ 
Sbjct: 464 YVADLQSMLGVSRLRRDYSDF 484



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 164/426 (38%), Gaps = 76/426 (17%)

Query: 33  VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           +G  +G+L     SP  +  ++  D+ FV+AG    H   +D +G  YTWG    G+LGH
Sbjct: 286 LGHNRGSL-----SPAVVDYILDRDVVFVSAG--DSHSACIDRQGVLYTWGSGGFGRLGH 338

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG------WNKHGQLGSGS 146
           GD+ +   P  V       + +   G  HT+ +T  G   A+G        +    G G 
Sbjct: 339 GDQGEIPVPRKVEGFGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGM 398

Query: 147 IRNEIEPSPVRCLVSEV-------TATACGADFTVWLSSVEGASILNAGLPQ---YGQLG 196
           +      S +   V  V        A   G D  VW   V G+S L  G  Q   + +  
Sbjct: 399 VTVPKHLSDIEVAVLNVAAGPYHSAAVTVGGDLLVW--GVGGSSRLGHGDQQNQPFPKYV 456

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE------------TIVKVACGTNHTVAV 244
               N     D    L      R  +   + GE            T+  + CG NHTVA+
Sbjct: 457 ADLRNRMYVADLQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVAL 516

Query: 245 DSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
              G V+ WG    G+LG  EQ  +D++ P ++D F       P   I+ GS +    A 
Sbjct: 517 TGTGAVWVWGSNDEGQLGLGEQVEEDQYEPVKLDCFST-----PIRRIACGSKHCLAVAQ 571

Query: 303 GGQLYMWGKLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHFVGAD-SSCI-------- 352
            G ++ WG   +        +P  + +    LR      +  F G D S+CI        
Sbjct: 572 YGDVFAWGANDDGQLGLGVLRPSFEPAAVTALR----QAIDVFCGDDYSACITSNGGAQT 627

Query: 353 ---------------SWGHAQYGELGYGPYGQKSSAM-PKKVDILEGMHVISVACGYGHS 396
                          +WG A+ G+LG G      S + P+KV     + V + + G  H+
Sbjct: 628 VSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKVPF--SVPVCACSLGTSHA 685

Query: 397 LVIVDR 402
           L I  R
Sbjct: 686 LAITAR 691



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 97/409 (23%), Positives = 147/409 (35%), Gaps = 89/409 (21%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV---SELSKYKIKK------- 114
           C + H +A+   G  Y WG    G LG GD      P  V   SE    K K+       
Sbjct: 188 CGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRR 247

Query: 115 ---------AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
                      AG  H++  T DG    +G   +G+LG G  R  + P+ V  ++     
Sbjct: 248 GTDPVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRGSLSPAVVDYILDRDVV 307

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
                D        +G  +   G   +G+LGHG   E               P PR +  
Sbjct: 308 FVSAGDSHSACIDRQGV-LYTWGSGGFGRLGHGDQGEI--------------PVPRKVEG 352

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW---VPRRVDVFQRNN 282
             G  +++VACGT HT+A+  KG V+ WG G    LG  E        VP+ +     ++
Sbjct: 353 FGGVPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHL-----SD 407

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGD--DWMYPKPLMDLSG------ 330
           +      ++AG  +S+    GG L +WG        +GD  +  +PK + DL        
Sbjct: 408 IEVAVLNVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVAD 467

Query: 331 ---------------------------------WNLRCMDSGNMHHFVGADSSCI-SWGH 356
                                            W L+ +  G  H      +  +  WG 
Sbjct: 468 LQSMLGVSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGS 527

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              G+LG G   ++    P K+D      +  +ACG  H L +    +V
Sbjct: 528 NDEGQLGLGEQVEEDQYEPVKLDCF-STPIRRIACGSKHCLAVAQYGDV 575



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/164 (30%), Positives = 69/164 (42%), Gaps = 15/164 (9%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           GR       N  +PT+     GV IR VAAG  + H +A+ ++G  + WG+ E       
Sbjct: 703 GRLGIGTTANAYAPTKCDFPKGVRIRSVAAG--ASHSLALSMDGDLWIWGKKE----DTC 756

Query: 94  DKIQRDRPTIVSELSKY----KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
                + P I  +L       K+K   A   H++ VTE G   A+G NK  Q G G  + 
Sbjct: 757 STTNYNSPRIFMQLESPSGVPKVKSIAAAEHHSLAVTETGEVFAWGDNKLYQTGCGKRQA 816

Query: 150 EIEPSPVRCL----VSEVTATACGADFTVWLS-SVEGASILNAG 188
           E    P        V +  AT   A F V  S  V  A ++N G
Sbjct: 817 ERLDRPEMIAGLPNVCQWVATGPQASFFVLCSGEVYAAGVINGG 860



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 64/239 (26%), Positives = 91/239 (38%), Gaps = 60/239 (25%)

Query: 220 PRAIAALAGETIVKVACGTNHTV-----AVDSKGYVYTWGFGGYGRLGH---------RE 265
           P  +   +   + +V+CGTN++      A  S G VYT+G G  GRLG+         R+
Sbjct: 93  PGLVPFFSRHGVFEVSCGTNNSAVLVKRAQQSGGKVYTFGLGNRGRLGYPKSKAEGGARQ 152

Query: 266 QKDE----------WV---PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           Q D+          W    P RV    +  +    A IS G+ ++   + GG LY WG  
Sbjct: 153 QGDDAGDGQEDGPSWFTPKPARVRFRDKCKI----ARISCGADHTLALSDGGALYAWGVG 208

Query: 313 K----NNGDDWMYPKPLMDLSGWN---------------------LRCMDSGNMHHFV-G 346
                  GD      P+  L G                       + C  +G  H     
Sbjct: 209 SYGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACT 268

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +D +  +WGH   G LG G    + S  P  VD +    V+ V+ G  HS  I DR  V
Sbjct: 269 SDGTLWTWGHGGNGRLGLG--HNRGSLSPAVVDYILDRDVVFVSAGDSHSACI-DRQGV 324



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 65/265 (24%), Positives = 106/265 (40%), Gaps = 21/265 (7%)

Query: 13  ETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVA 72
           E+G E G +L   G+     +G  +    G++++P +    V   +   A    + H +A
Sbjct: 633 ESGTEFG-DLWTWGAAESGKLGLGEDVASGSILTPQK----VPFSVPVCACSLGTSHALA 687

Query: 73  VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL 132
           +   G CY WG    G+LG G       PT        +I+   AG SH++ ++ DG+  
Sbjct: 688 ITARGECYAWGAGYYGRLGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGD-- 745

Query: 133 AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
            + W K     S +  N    SP R  +   + +         + S+  A   +  + + 
Sbjct: 746 LWIWGKKEDTCSTTNYN----SP-RIFMQLESPSGVPK-----VKSIAAAEHHSLAVTET 795

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G++    DN+        + A E   RP  IA L       VA G   +  V   G VY 
Sbjct: 796 GEVFAWGDNKLYQTGCGKRQA-ERLDRPEMIAGLP-NVCQWVATGPQASFFVLCSGEVYA 853

Query: 253 WGFGGYGRLGH--REQKDEWVPRRV 275
            G    GRLG    ++K ++ P  V
Sbjct: 854 AGVINGGRLGTGWSKRKYQFAPAAV 878


>gi|443697240|gb|ELT97775.1| hypothetical protein CAPTEDRAFT_180059 [Capitella teleta]
          Length = 453

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 132/298 (44%), Gaps = 29/298 (9%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   GS C   +G    A+ G  + P ++  L   +I   A G    H +A    G  Y
Sbjct: 43  EVYSLGSNCSGCLGLGSDAMSG--LEPRKVEQLCKKNIVSFAYGS-GPHVLATTNAGEVY 99

Query: 81  TWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           +WG N   QLG+G   Q   PT + S L   +I     G  H++ ++ +G   A+G N  
Sbjct: 100 SWGHNGYCQLGNGSTNQGPTPTPVTSSLLGKRITAIACGSHHSMALSSEGEIFAWGQNNC 159

Query: 140 GQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           GQ+GSG+  N+  P  V   +   +  + ACG   T  +++ +   +   G    GQLG 
Sbjct: 160 GQVGSGTTSNQPTPRKVTACIGSKKCISIACGQ--TSSIAAFDTGEVFGWGYNGNGQLGL 217

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G  N  N            QP P  +  L    I ++ACG  HT+ +  +G +Y WG   
Sbjct: 218 G--NNIN------------QPNPCRLVVLNNVFITQIACGYAHTLGLTDEGSLYAWGANS 263

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN--SSCTAGGGQLYMWGKLK 313
           YG+LG   + +   P R+ V      L     I+A   N  S+     G+++MWG+ +
Sbjct: 264 YGQLGTGNKANMISPVRIAV-----DLGRFVEIAATHYNHLSAALTQAGKVFMWGQCR 316



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 128/289 (44%), Gaps = 28/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSE-VTATACGADFT 173
           G+  +  +V+T D    + G N  G LG GS   + +EP  V  L  + + + A G+   
Sbjct: 29  GSAGNEAIVITNDDEVYSLGSNCSGCLGLGSDAMSGLEPRKVEQLCKKNIVSFAYGSGPH 88

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           V L++     + + G   Y QLG+G+ N+  T            P P   ++L G+ I  
Sbjct: 89  V-LATTNAGEVYSWGHNGYCQLGNGSTNQGPT------------PTP-VTSSLLGKRITA 134

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +ACG++H++A+ S+G ++ WG    G++G     ++  PR+V     +        I+ G
Sbjct: 135 IACGSHHSMALSSEGEIFAWGQNNCGQVGSGTTSNQPTPRKVTACIGSKKC---ISIACG 191

Query: 294 SVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKP--LMDLSGWNLRCMDSGNMHHFVGA 347
             +S      G+++ WG   N     G++   P P  L+ L+   +  +  G  H     
Sbjct: 192 QTSSIAAFDTGEVFGWGYNGNGQLGLGNNINQPNPCRLVVLNNVFITQIACGYAHTLGLT 251

Query: 348 DS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
           D  S  +WG   YG+LG G      S +   VD+  G  V   A  Y H
Sbjct: 252 DEGSLYAWGANSYGQLGTGNKANMISPVRIAVDL--GRFVEIAATHYNH 298


>gi|432930911|ref|XP_004081521.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Oryzias
           latipes]
          Length = 531

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 138/302 (45%), Gaps = 38/302 (12%)

Query: 21  ELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCY 80
           E+   G  C + +G        + + P +L  L G  I  ++ G    H +    +G  +
Sbjct: 42  EVFVLGLNCSNCLGTGDSQ---STIVPKKLDFLNGRKIVSLSYGS-GPHVLMATEDGELF 97

Query: 81  TWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            WG N   QLG+G   Q   P +VS  +   K+ +   G  H++ +T+ G   A+G+N  
Sbjct: 98  AWGHNGYSQLGNGTTNQGVAPVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNC 157

Query: 140 GQLGSGSIRNEIEPSPVR---CLVSEVTA-TACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQ+GSGS  N  +P+P R   CL ++V     CG   T  L+ V+   +   G    GQL
Sbjct: 158 GQVGSGSTAN--QPTPRRVSSCLQNKVAVGIVCGQ--TSSLAVVDNGEVYGWGYNGNGQL 213

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G +                Q  P  + AL G  ++++ CG  H +A+  +G +Y WG 
Sbjct: 214 GLGNNGN--------------QLTPCRLVALQGLCVLQIVCGYAHCLALSDEGVLYAWGS 259

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGK 311
             YG+LG   + ++  P ++       +   E ++   + +S+ T+      GQ+YMWG+
Sbjct: 260 NTYGQLGTGNKSNQLSPVQI-------MSEKERIVEVAACHSTHTSAAKTQSGQVYMWGQ 312

Query: 312 LK 313
            +
Sbjct: 313 CR 314



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/296 (28%), Positives = 136/296 (45%), Gaps = 39/296 (13%)

Query: 104 VSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           + ELS   I+KA   G+  +  V VT D      G N    LG+G  ++ I P  +  L 
Sbjct: 15  LEELSM--IRKACVFGSSANEAVYVTHDDEVFVLGLNCSNCLGTGDSQSTIVPKKLDFLN 72

Query: 161 -SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             ++ + + G+   V +++ +G  +   G   Y QLG+GT N+                 
Sbjct: 73  GRKIVSLSYGSGPHVLMATEDG-ELFAWGHNGYSQLGNGTTNQ--------------GVA 117

Query: 220 PRAIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P  ++A +  + +V+VACG++H++A+   G VY WG+   G++G     ++  PRRV   
Sbjct: 118 PVLVSANMLNKKVVEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSC 177

Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSG 330
            +N V    AV I  G  +S      G++Y WG        L NNG+  + P  L+ L G
Sbjct: 178 LQNKV----AVGIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLVALQG 232

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS---AMPKKVDILE 382
             +  +  G  H    +D   + +WG   YG+LG G    + S    M +K  I+E
Sbjct: 233 LCVLQIVCGYAHCLALSDEGVLYAWGSNTYGQLGTGNKSNQLSPVQIMSEKERIVE 288



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGA--DSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           + PK L  L+G  +  +  G+  H + A  D    +WGH  Y +LG G   Q  + +   
Sbjct: 63  IVPKKLDFLNGRKIVSLSYGSGPHVLMATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVS 122

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTNV 405
            ++L    V+ VACG  HS+ + D   V
Sbjct: 123 ANMLNK-KVVEVACGSHHSMALTDSGEV 149


>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
 gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 163/368 (44%), Gaps = 45/368 (12%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAG 118
            VA  C   H + +   G  Y  G N+ GQLG   DK     P  VS L K KI    AG
Sbjct: 68  LVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPK-KIIHIAAG 126

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIE-PSPVRCLVS-EVTATACGADFTVW 175
             H+  +T DG    +G N +GQLG G    N +  PS V CL    +   A G++ +V 
Sbjct: 127 YYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPSKVECLNGISIKMVALGSEHSV- 185

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY---EAQPRPRAIAALAGETIV 232
            ++ +    L+ G    G+LGHG +        S  L +    ++ RPR I  L G  + 
Sbjct: 186 -AATDQGEALSWGAGGSGRLGHGHE--------SSLLGFFRTSSEYRPRLIRRLEGIKVK 236

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            VA G  H+  +D  G V+ +G     + G RE K+   P  +      + LP    ++ 
Sbjct: 237 NVAAGLLHSACIDENGSVFIFGERAMDKFGFREAKNATAPSMI------SELPYSKQVAC 290

Query: 293 GSVNSSCTAGGGQLYMWGKLKNN--GDDWM----YPK---------PLMDLS-GW-NLRC 335
           G  ++   +  G+L+ WG  +N   G  +M    +P+         P+  +S GW +   
Sbjct: 291 GGYHTCVISSSGELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAA 350

Query: 336 MDSGNMHHFV--GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
           +  GN+  +   G+  +    GH+  G+LG G         PK V+  E +  + V+CG+
Sbjct: 351 ISEGNVFTWGWGGSYGTFSDDGHSSGGQLGQGS--DVDHIKPKMVEFEESVRALQVSCGF 408

Query: 394 GHSLVIVD 401
            H+  I++
Sbjct: 409 NHTGAILE 416



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 142/336 (42%), Gaps = 36/336 (10%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  + G+LG G    + RP + S    + +     G +HT+ +TE G   A G N  GQ
Sbjct: 38  WGNGDFGRLGLGSLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQ 97

Query: 142 LGSGSIRN-EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG    +N   EP  V  L  ++   A G   +  +++     +   G    GQLG G  
Sbjct: 98  LGVSVDKNYTTEPLEVSALPKKIIHIAAGYYHSAAITA--DGELYMWGKNSNGQLGLG-- 153

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
                     K A  A   P  +  L G +I  VA G+ H+VA   +G   +WG GG GR
Sbjct: 154 ----------KKAANAVSVPSKVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGR 203

Query: 261 LGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           LGH  +           E+ PR +   +   V      ++AG ++S+C    G ++++G+
Sbjct: 204 LGHGHESSLLGFFRTSSEYRPRLIRRLEGIKV----KNVAAGLLHSACIDENGSVFIFGE 259

Query: 312 LKNNGDDWMYPK----PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP 366
              +   +   K    P M       + +  G  H  V + S    +WG  + G LG G 
Sbjct: 260 RAMDKFGFREAKNATAPSMISELPYSKQVACGGYHTCVISSSGELFTWGSNENGCLGMGF 319

Query: 367 YGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVD 401
              ++   P++++       V  V+CG+ H+  I +
Sbjct: 320 --METIHFPERIEGPFSKNPVSQVSCGWKHTAAISE 353



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/216 (29%), Positives = 101/216 (46%), Gaps = 25/216 (11%)

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           + E+Q RP   +A    ++V +ACG  HT+ +   G VY  G   +G+LG    K+ +  
Sbjct: 50  SLESQWRPAVCSAFDHHSLVAIACGGAHTLFLTESGCVYAAGLNDFGQLGVSVDKN-YTT 108

Query: 273 RRVDVFQRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNN--------GDDWMYPK 323
             ++V    + LP + + I+AG  +S+     G+LYMWGK  N          +    P 
Sbjct: 109 EPLEV----SALPKKIIHIAAGYYHSAAITADGELYMWGKNSNGQLGLGKKAANAVSVPS 164

Query: 324 PLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGP-------YGQKSSAMP 375
            +  L+G +++ +  G+ H     D    +SWG    G LG+G        +   S   P
Sbjct: 165 KVECLNGISIKMVALGSEHSVAATDQGEALSWGAGGSGRLGHGHESSLLGFFRTSSEYRP 224

Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV---GER 408
           + +  LEG+ V +VA G  HS  I +  +V   GER
Sbjct: 225 RLIRRLEGIKVKNVAAGLLHSACIDENGSVFIFGER 260



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 64/171 (37%), Gaps = 22/171 (12%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           ++ G +   G    D  G R+     N  +P+ +  L           C   H   +   
Sbjct: 249 DENGSVFIFGERAMDKFGFREAK---NATAPSMISELPYSK----QVACGGYHTCVISSS 301

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           G  +TWG NE G LG G       P  I    SK  + +   G  HT  ++E GN   +G
Sbjct: 302 GELFTWGSNENGCLGMGFMETIHFPERIEGPFSKNPVSQVSCGWKHTAAISE-GNVFTWG 360

Query: 136 W------------NKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
           W            +  GQLG GS  + I+P  V    S      +CG + T
Sbjct: 361 WGGSYGTFSDDGHSSGGQLGQGSDVDHIKPKMVEFEESVRALQVSCGFNHT 411


>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 693

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 157/365 (43%), Gaps = 48/365 (13%)

Query: 47  PTRLRPLVGVD--IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           PT+  P + V   I  VA      H +A+  +G  + WG N  GQLG G  I R  P  V
Sbjct: 333 PTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPRPSPVQV 392

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
            +L+   +    AG SH++ +  DG   A+G N  GQLG G+  + + P  V  L ++V 
Sbjct: 393 PDLTD--VVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDL-TDVV 449

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A + G + T+ L +    ++   G    GQLG GT                  PR   + 
Sbjct: 450 ALSAGGNHTLALRT--NGTVWAWGSNSDGQLGDGT----------------TTPRLSPVQ 491

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-----HREQKDEWVPRRVDVFQ 279
            L    +V ++ G  H++AV + G V+ WG    G+LG     HR    + VP   DV  
Sbjct: 492 MLGLTNVVALSAGYYHSLAVHTDGTVWAWGSNSDGQLGDGTTTHRLTPVQ-VPGLTDVV- 549

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPK--PLMDLSGWNLRC 335
                     +SAG  +S      G ++ WG   ++  GD    P+  P+      ++  
Sbjct: 550 ---------ALSAGDSHSLALRTDGTVWAWGSNSSSQLGDGTTTPRGSPVQVPGLTDVVA 600

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           + +G  H   +  D +  +WG   YG+LG G    +    P  V  L G    ++  G G
Sbjct: 601 LSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTTTPR--LFPVLVSNLTGTS--NLYAGAG 656

Query: 395 HSLVI 399
           HSL +
Sbjct: 657 HSLAL 661



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 147/337 (43%), Gaps = 36/337 (10%)

Query: 68  CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
            H +A+  +G  + WG N  GQLG G    R  P  V  L+   +    AG  H + +  
Sbjct: 6   SHSLALHTDGTVWAWGSNSSGQLGDGTTTPRGSPVQVPGLT--DVVALSAGNHHCLALRT 63

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG   A+G N  GQLG G+    +    V  L ++V A + G+ +T+ L +    ++   
Sbjct: 64  DGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGL-TDVVALSAGSSYTLALRT--DGTVWAW 120

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   YGQLG GT                  PR   +       +V ++ G  H++A+ + 
Sbjct: 121 GYNFYGQLGDGT----------------TTPRLAPVQVPGLTDVVALSSGIYHSLALRTD 164

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G V+ WG    G+LG     D    RR+   Q    L     +SAG  +S      G ++
Sbjct: 165 GTVWAWGDNASGQLG-----DGTATRRLSPVQVPG-LTDVVALSAGGYHSLAVRTDGTVW 218

Query: 308 MWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
            WG   +   GD    P+  P+      N+  + + + +   +  D +  +WG+  YG+L
Sbjct: 219 AWGSNFSGQLGDGTATPRLSPVQVSGLTNVVALSADDSYTLALRTDGTVWAWGYNSYGQL 278

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G G    + S  P +V  L   +V++++ GY HSL +
Sbjct: 279 GDGTTTPRLS--PVQVPGLT--NVVALSAGYSHSLAL 311



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 153/349 (43%), Gaps = 38/349 (10%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
            D+  ++AG  + HC+A+  +G  + WG N  GQLG G    R     V  L+   +   
Sbjct: 46  TDVVALSAG--NHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD--VVAL 101

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
            AG S+T+ +  DG   A+G+N +GQLG G+    + P  V  L ++V A + G   ++ 
Sbjct: 102 SAGSSYTLALRTDGTVWAWGYNFYGQLGDGTTTPRLAPVQVPGL-TDVVALSSGIYHSLA 160

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L +    ++   G    GQLG GT                A  R   +       +V ++
Sbjct: 161 LRT--DGTVWAWGDNASGQLGDGT----------------ATRRLSPVQVPGLTDVVALS 202

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G  H++AV + G V+ WG    G+LG         P  V V    NV+     +SA   
Sbjct: 203 AGGYHSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSP--VQVSGLTNVV----ALSADDS 256

Query: 296 NSSCTAGGGQLYMWG--KLKNNGDDWMYPK--PLMDLSGWNLRCMDSGNMHHF-VGADSS 350
            +      G ++ WG       GD    P+  P+      N+  + +G  H   +  D +
Sbjct: 257 YTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVVALSAGYSHSLALRTDGT 316

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +WG+   G+LG G   Q+S ++P    +   + V++++ GY HSL +
Sbjct: 317 VWAWGYNYNGQLGNGIPTQRSPSIP----VFGLIDVVALSAGYSHSLAL 361



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 160/362 (44%), Gaps = 44/362 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           +SP ++  L   D+  ++AG    H +AV  +G  + WG N  GQLG G    R  P  V
Sbjct: 187 LSPVQVPGLT--DVVALSAG--GYHSLAVRTDGTVWAWGSNFSGQLGDGTATPRLSPVQV 242

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
           S L+   +    A  S+T+ +  DG   A+G+N +GQLG G+    + P  V  L + V 
Sbjct: 243 SGLTN--VVALSADDSYTLALRTDGTVWAWGYNSYGQLGDGTTTPRLSPVQVPGLTNVV- 299

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A  A ++  L+     ++   G    GQLG+G   +                R  +I 
Sbjct: 300 --ALSAGYSHSLALRTDGTVWAWGYNYNGQLGNGIPTQ----------------RSPSIP 341

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
                 +V ++ G +H++A+ + G V+ WG+   G+LG         P  V V    +V+
Sbjct: 342 VFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQLGDGTTIPR--PSPVQVPDLTDVV 399

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDW----MYPKPLMDLSGWNLRCMDS 338
                +SAG  +S      G +  WG   +   GD      + P  + DL+  ++  + +
Sbjct: 400 ----ALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLSPVQVPDLT--DVVALSA 453

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           G  H   +  + +  +WG    G+LG G     ++     V +L   +V++++ GY HSL
Sbjct: 454 GGNHTLALRTNGTVWAWGSNSDGQLGDG----TTTPRLSPVQMLGLTNVVALSAGYYHSL 509

Query: 398 VI 399
            +
Sbjct: 510 AV 511



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 70/243 (28%), Positives = 97/243 (39%), Gaps = 27/243 (11%)

Query: 23  LFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDI-RFVAAGCVSCHCVAVDVEGRCYT 81
           L    T W       G L     +P RL P+  + +   VA      H +AV  +G  + 
Sbjct: 461 LRTNGTVWAWGSNSDGQLGDGTTTP-RLSPVQMLGLTNVVALSAGYYHSLAVHTDGTVWA 519

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG N  GQLG G    R  P  V  L+   +    AG SH++ +  DG   A+G N   Q
Sbjct: 520 WGSNSDGQLGDGTTTHRLTPVQVPGLTD--VVALSAGDSHSLALRTDGTVWAWGSNSSSQ 577

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LG G+      P  V  L   V  +A GA     L+     ++   G   YGQLG GT  
Sbjct: 578 LGDGTTTPRGSPVQVPGLTDVVALSAGGAHS---LALRTDGTVWAWGSNYYGQLGDGT-- 632

Query: 202 EYNTKDSSVKLAYEAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                           PR  P  ++ L G +   +  G  H++A+ + G    WG    G
Sbjct: 633 --------------TTPRLFPVLVSNLTGTS--NLYAGAGHSLALRTDGTGRAWGNNYGG 676

Query: 260 RLG 262
           +LG
Sbjct: 677 QLG 679



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
            D+  ++AG    H +A+  +G  + WG N  GQLG G    R  P +VS L+      A
Sbjct: 596 TDVVALSAG--GAHSLALRTDGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLTGTSNLYA 653

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
           GAG  H++ +  DG   A+G N  GQLG G+    + P
Sbjct: 654 GAG--HSLALRTDGTGRAWGNNYGGQLGDGTSAFFLHP 689


>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
           scrofa]
          Length = 969

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 673 AYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 732

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 733 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 792

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 793 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 844

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 845 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 898

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 899 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 931



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 677 DTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 727

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 728 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 782

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 783 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 840

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 841 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHGT--EEHVRY 896

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 897 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 927



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 85/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 639 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAH 698

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 699 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 758

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHF- 344
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 759 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 816

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           V  +    SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 817 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 870



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/255 (21%), Positives = 103/255 (40%), Gaps = 41/255 (16%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 732 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 791

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 792 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 851

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 852 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 895

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
               +   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 896 ----YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPSA 951

Query: 223 IAALAGETIVKVACG 237
           +  L  + IV +ACG
Sbjct: 952 LPGLDTKHIVGIACG 966


>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 684

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/345 (29%), Positives = 151/345 (43%), Gaps = 38/345 (11%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            VAA   S H +A+  +G  + WG N  GQLG+G    R  P  V  LS        AG 
Sbjct: 38  VVAAAAGSIHSLALRNDGTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLSGG--VSVDAGH 95

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
            H++ V +DG   A+G N +GQLG G+    + P  V+ L SEV A   G+  ++ L S 
Sbjct: 96  YHSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGL-SEVVAVTAGSSHSLALRS- 153

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
              ++   G    GQLG GT                   R   +  L    +V V  G++
Sbjct: 154 -DGTVWAWGANASGQLGEGTTTN----------------RLVPVPVLGLSEVVAVEAGSS 196

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H++A+ S G V+ WG    G+LG        VP +        VL     + AGS  S  
Sbjct: 197 HSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQ--------VLSGVVAMEAGSGYSLA 248

Query: 300 TAGGGQLYMWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSG-NMHHFVGADSSCISW 354
               G ++ WG   +   GDD +  +  P+  L    +  + +G ++   + +D +  +W
Sbjct: 249 VRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLGLSEVVAVAAGSSLSLALRSDGTVWAW 308

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G   YG+ G G    +  A P +   L G   ++VA GY HSL +
Sbjct: 309 GSNDYGQRGEGTTSNR--AFPVQARGLSGG--VAVAAGYAHSLAV 349



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 151/338 (44%), Gaps = 42/338 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +AV  +G  + WG N  GQLG G   +R  P  V  LS  ++    AG SH++ +  D
Sbjct: 97  HSLAVRDDGTVWAWGDNPNGQLGEGTTTRRLVPVQVQGLS--EVVAVTAGSSHSLALRSD 154

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N  GQLG G+  N + P PV  L SEV A   G+  ++ L S    ++   G
Sbjct: 155 GTVWAWGANASGQLGEGTTTNRLVPVPVLGL-SEVVAVEAGSSHSLALRS--DGTVWAWG 211

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLG GT  +                R   +  L+G  +V +  G+ +++AV + G
Sbjct: 212 ANASGQLGDGTTTK----------------RLVPVQVLSG--VVAMEAGSGYSLAVRNDG 253

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG+   G+LG         P  V V   + V+     ++AGS  S      G ++ 
Sbjct: 254 TVWAWGYNFSGQLGDDTVTSRSTP--VQVLGLSEVVA----VAAGSSLSLALRSDGTVWA 307

Query: 309 WG------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           WG      + +    +  +P     LSG     + +G  H   V +D +  +WG    G+
Sbjct: 308 WGSNDYGQRGEGTTSNRAFPVQARGLSG--GVAVAAGYAHSLAVRSDGTVWAWGSNASGQ 365

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           LG G    +S   P +V  L G  V++V+ G   SL I
Sbjct: 366 LGEGTTSNRSE--PVQVQGLSG--VVAVSAGASSSLAI 399



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 154/371 (41%), Gaps = 39/371 (10%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G+R      N   P + R L G     VA      H +AV  +G  + WG N  GQLG G
Sbjct: 314 GQRGEGTTSNRAFPVQARGLSG----GVAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEG 369

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
               R  P  V  LS      AGA  S ++ +  DG   A+G N  GQLG G+  + + P
Sbjct: 370 TTSNRSEPVQVQGLSGVVAVSAGA--SSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVP 427

Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
             V+ L S V A   G  F+  L+     ++   G   YGQLG        T  S   L 
Sbjct: 428 VQVQGL-SGVVAVVAGTSFS--LAVRNDGTVWGWGYNGYGQLG--------TFTSLFVLV 476

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P  +  L+G  +V VA G  H++AV S G V+  G    G+LG     +   P 
Sbjct: 477 ------PVQVTGLSG--VVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTNRSAPV 528

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD-DWMYPKPLMDLSG 330
           +V        L     ++AG  +S      G ++ WG       GD  W      + ++G
Sbjct: 529 QV------TGLSGVVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVTG 582

Query: 331 WNLR--CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
            + R     S +    V  D +  +WG   YG+LG G     +  +P +V  L G  V++
Sbjct: 583 LSGRGSVAASSDYSMAVRYDGTVWAWGFNLYGQLGDGTT-SSNQLVPVQVQQLRG--VVA 639

Query: 389 VACGYGHSLVI 399
           V  G  HSL +
Sbjct: 640 VEVGSSHSLAL 650



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 168/416 (40%), Gaps = 88/416 (21%)

Query: 41  DGNLVSPTRLRPLVGVDIR----FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           +G L   T  R LV V ++     VA    S H +A+  +G  + WG N  GQLG G   
Sbjct: 115 NGQLGEGTTTRRLVPVQVQGLSEVVAVTAGSSHSLALRSDGTVWAWGANASGQLGEGTTT 174

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP--- 153
            R  P  V  LS+    +AG+  SH++ +  DG   A+G N  GQLG G+    + P   
Sbjct: 175 NRLVPVPVLGLSEVVAVEAGS--SHSLALRSDGTVWAWGANASGQLGDGTTTKRLVPVQV 232

Query: 154 -------------------------------------------SPVRCL-VSEVTATACG 169
                                                      +PV+ L +SEV A A G
Sbjct: 233 LSGVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRSTPVQVLGLSEVVAVAAG 292

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L S    ++   G   YGQ G GT +           A+  Q R      L+G 
Sbjct: 293 SSLSLALRS--DGTVWAWGSNDYGQRGEGTTSNR---------AFPVQAR-----GLSGG 336

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
             V VA G  H++AV S G V+ WG    G+LG     +   P +V        L     
Sbjct: 337 --VAVAAGYAHSLAVRSDGTVWAWGSNASGQLGEGTTSNRSEPVQV------QGLSGVVA 388

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHH 343
           +SAG+ +S      G ++ WG   +   GD    D + P  +  LSG  +  +   +   
Sbjct: 389 VSAGASSSLAIRSDGTVWAWGSNASGQLGDGTTTDRLVPVQVQGLSG-VVAVVAGTSFSL 447

Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            V  D +   WG+  YG+L  G +      +P +V  L G  V++VA G  HSL +
Sbjct: 448 AVRNDGTVWGWGYNGYGQL--GTFTSLFVLVPVQVTGLSG--VVAVAAGNLHSLAV 499



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 74/226 (32%), Positives = 109/226 (48%), Gaps = 24/226 (10%)

Query: 42  GNLVSPTRLRPLVGVDIR----FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G L + T L  LV V +      VA    + H +AV  +G  +  GRN+ GQLG G    
Sbjct: 464 GQLGTFTSLFVLVPVQVTGLSGVVAVAAGNLHSLAVRSDGTVWALGRNDNGQLGDGSWTN 523

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V+ LS   +    AG SH++ V  DG+  A+G+N  GQLG GS      P  V 
Sbjct: 524 RSAPVQVTGLSG--VVSVAAGDSHSLAVRYDGSVWAWGYNSFGQLGDGSWFQRSAPVQVT 581

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L S   + A  +D++  ++     ++   G   YGQLG GT +               Q
Sbjct: 582 GL-SGRGSVAASSDYS--MAVRYDGTVWAWGFNLYGQLGDGTTSSN-------------Q 625

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
             P  +  L G  +V V  G++H++A+ S G V+TWG+  +G+LG+
Sbjct: 626 LVPVQVQQLRG--VVAVEVGSSHSLALRSDGTVWTWGYNSFGQLGN 669



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 149/336 (44%), Gaps = 52/336 (15%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           +G  +  G N  GQLG G +  R  P  V  LS+  +  A AG  H++ +  DG   A+G
Sbjct: 4   DGTVWAAGNNGSGQLGDGTRDNRSTPVQVLGLSE--VVAAAAGSIHSLALRNDGTVWAWG 61

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADFTVWLSSVEGASILNAG 188
           +N +GQLG+GS+ +  EP  V+ L   V+       + A   D TVW            G
Sbjct: 62  YNGYGQLGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVWA----------WG 111

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLG GT                 +  P  +  L+   +V V  G++H++A+ S G
Sbjct: 112 DNPNGQLGEGTTTR--------------RLVPVQVQGLS--EVVAVTAGSSHSLALRSDG 155

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG    G+LG     +  VP  V V   + V+  E    AGS +S      G ++ 
Sbjct: 156 TVWAWGANASGQLGEGTTTNRLVP--VPVLGLSEVVAVE----AGSSHSLALRSDGTVWA 209

Query: 309 WGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
           WG   +   GD     +  P+  LSG  +  M++G+ +   V  D +  +WG+   G+LG
Sbjct: 210 WGANASGQLGDGTTTKRLVPVQVLSG--VVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLG 267

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                 +S+     V +L    V++VA G   SL +
Sbjct: 268 DDTVTSRST----PVQVLGLSEVVAVAAGSSLSLAL 299



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 3/80 (3%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVV 125
           S + +AV  +G  + WG N  GQLG G        P  V +L      + G+  SH++ +
Sbjct: 593 SDYSMAVRYDGTVWAWGFNLYGQLGDGTTSSNQLVPVQVQQLRGVVAVEVGS--SHSLAL 650

Query: 126 TEDGNSLAFGWNKHGQLGSG 145
             DG    +G+N  GQLG+G
Sbjct: 651 RSDGTVWTWGYNSFGQLGNG 670


>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
            [Callithrix jacchus]
 gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
            [Callithrix jacchus]
          Length = 4860

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4217

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P++V V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALASNGDVYAWGSNSE 4319

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4320 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4353



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4225

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4338

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4339 LQGKNVRQISAGRCHSAAWT 4358



 Score = 45.4 bits (106), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|356501930|ref|XP_003519776.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 388

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 153/355 (43%), Gaps = 45/355 (12%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTV 123
           C   H +A+   G+  +WGR   GQLGHG+ +     P  V+ L  Y I    AG SH+ 
Sbjct: 58  CGGAHVIALTSAGKALSWGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSG 117

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGA 182
            V++ G     G    GQLG G   +   P  V C V   V   ACG   ++ L  ++G 
Sbjct: 118 FVSDTGFVFTCGDGSFGQLGHGDNASHCSPVKVSCFVDLHVAQVACGMRHSLVL--LKGN 175

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            +   G  + GQLG   D     +  SV +       P+ ++   G  IV  A   +H+ 
Sbjct: 176 QVYGFGSGKRGQLGVSND-----RVKSVNV-------PKVVSGFEGVEIVGTAANGDHSA 223

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           AV   G+VYTWG G  G       +D  VP+ +     N+ L    V + G  ++   +G
Sbjct: 224 AVSVDGHVYTWGRGFKGF------EDAHVPQCL-----NSSLNFTKV-ALGWNHALAMSG 271

Query: 303 GGQLYMWG--------KLKNNGDDWMYP-------KPLMDLSGWNLRCMDSGNMHHFVGA 347
            G++YM G         L+N G    +P       + +  L G  +  + +G  H  +  
Sbjct: 272 EGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDIAAGAEHSVIVT 331

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDI-LEGMHVISVACGYGHSLVIV 400
           +   I +WG  ++G+LG G    ++S +   +D  L     I V CG G +  + 
Sbjct: 332 EHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSLDYDLNEAASIRVFCGSGFTFAVT 386



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 82/344 (23%), Positives = 148/344 (43%), Gaps = 38/344 (11%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           E R ++WG    GQLG   KI +D   P ++ + S   I     G +H + +T  G +L+
Sbjct: 17  EQRVWSWGAGTEGQLG--TKILQDEHFPQLLHQFSLSSISSLACGGAHVIALTSAGKALS 74

Query: 134 FGWNKHGQLGSGS-IRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQ 191
           +G    GQLG G  + N + P  V  L    +T  + G   + ++S      +   G   
Sbjct: 75  WGRGNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDT--GFVFTCGDGS 132

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLGHG +  + +              P  ++      + +VACG  H++ +     VY
Sbjct: 133 FGQLGHGDNASHCS--------------PVKVSCFVDLHVAQVACGMRHSLVLLKGNQVY 178

Query: 252 TWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
            +G G  G+LG  +   K   VP+ V  F+   ++      +A   +S+  +  G +Y W
Sbjct: 179 GFGSGKRGQLGVSNDRVKSVNVPKVVSGFEGVEIVG----TAANGDHSAAVSVDGHVYTW 234

Query: 310 GKLKNNGDDWMYPKPL---MDLS----GWNLRCMDSGNMH-HFVGADSSCISWGHAQYGE 361
           G+     +D   P+ L   ++ +    GWN     SG    + +G +   +       G 
Sbjct: 235 GRGFKGFEDAHVPQCLNSSLNFTKVALGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGP 294

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             + P  ++ +   +KV  L+G  +  +A G  HS+++ +   +
Sbjct: 295 AKHFPDLREFNL--EKVPGLDGTKITDIAAGAEHSVIVTEHGEI 336



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 16/170 (9%)

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
           +S+  V++WG G  G+LG +  +DE  P+ +  F  +++    + ++ G  +       G
Sbjct: 15  ESEQRVWSWGAGTEGQLGTKILQDEHFPQLLHQFSLSSI----SSLACGGAHVIALTSAG 70

Query: 305 QLYMWGKLKNNGD--------DWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWG 355
           +   WG+  N+G         + +YPK +  L G+ +  + +G  H  FV       + G
Sbjct: 71  KALSWGR-GNSGQLGHGEVVSNTLYPKAVTSLDGYFITHVSAGWSHSGFVSDTGFVFTCG 129

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +G+LG+G     S   P KV     +HV  VACG  HSLV++    V
Sbjct: 130 DGSFGQLGHGD--NASHCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQV 177



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 109/283 (38%), Gaps = 48/283 (16%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +  N + P  +  L G  I  V+AG    H   V   G  +T G    GQLGHGD   
Sbjct: 86  GEVVSNTLYPKAVTSLDGYFITHVSAGW--SHSGFVSDTGFVFTCGDGSFGQLGHGDNAS 143

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
              P  VS      + +   G  H++V+ +      FG  K GQLG  + R  ++   V 
Sbjct: 144 HCSPVKVSCFVDLHVAQVACGMRHSLVLLKGNQVYGFGSGKRGQLGVSNDR--VKSVNVP 201

Query: 158 CLVS-----EVTATACGADFTVWLSSVEG---------ASILNAGLPQ------------ 191
            +VS     E+  TA   D +  +S V+G             +A +PQ            
Sbjct: 202 KVVSGFEGVEIVGTAANGDHSAAVS-VDGHVYTWGRGFKGFEDAHVPQCLNSSLNFTKVA 260

Query: 192 ----YGQLGHGTDNEYNTKDSSVKLAYEAQ--------PRPR-----AIAALAGETIVKV 234
               +     G    Y    + + +  + Q        P  R      +  L G  I  +
Sbjct: 261 LGWNHALAMSGEGEVYMLGGNHLGVLSDLQNIGPAKHFPDLREFNLEKVPGLDGTKITDI 320

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           A G  H+V V   G + TWG+G +G+LG  + +D+  P  V +
Sbjct: 321 AAGAEHSVIVTEHGEIKTWGWGEHGQLGLGDTRDQTSPVTVSL 363


>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Equus caballus]
          Length = 4860

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVST-DGSMVWAFGDGDYGK 4217

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASNGDVYAWGSNSE 4319

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4320 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4353



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 137/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V  D S + ++G   YG+LG G    
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTA 4225

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ V+      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLVEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G  ++ + +G  H      +  D   ++W  
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747

Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
               +L    +    S + +  D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ +  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLVEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4281 PQQIPVLAGVVIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4339 LQGKNIRQISAGRCHSAAWT 4358



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP +V EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|410908657|ref|XP_003967807.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Takifugu rubripes]
          Length = 388

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 142/348 (40%), Gaps = 58/348 (16%)

Query: 85  NERGQLGHGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
           N  GQLGHG    R  P +   + L    ++    G  HT V+TEDG     G N  GQL
Sbjct: 3   NSYGQLGHGGVEDRPVPGLCDAAALKDKAVRVVTGGGGHTAVITEDGEVFVCGQNHRGQL 62

Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
           G G + +         L   VT   CG DFT++L+  +   +L+ G   +GQLG G    
Sbjct: 63  GLGHLTDISTLQRCLGLTQTVTNVTCGWDFTLFLT--DSGRVLSCGSNAFGQLGIGQKPA 120

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
           Y T D  +  + +A              +V VA G  H++AV   G VY WG G   +  
Sbjct: 121 Y-TADVQIVESLKA-------------AVVSVAAGLRHSLAVTDSGCVYQWGIGLMSQ-A 165

Query: 263 HREQKDEWVPRRVDVFQRNNVLPP---------EAVISAGSVNSSCTAGGGQLYMWGKLK 313
            R      VP  +     ++VLP            V++AGS++  C    G L++WG   
Sbjct: 166 KRTLSPSPVPSHL-----SSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLWG--S 218

Query: 314 NNGDDWMYPKPLMD---------LSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELG 363
           N     +  +P +          L G  +  + SG  H     ++    +WG   YG+LG
Sbjct: 219 NKHSQLLSSEPFLSSPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNYGQLG 278

Query: 364 -----------YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                            +   +P++V  L+G     + CG  H+L I+
Sbjct: 279 RHASTSQSSESQSTTEDQEVRLPEEVPALQG--ATQITCGSEHNLAIL 324



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 116/298 (38%), Gaps = 21/298 (7%)

Query: 20  GELLFCGSTCWDAVGRRKGALD-GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           GE+  CG          +G L  G+L   + L+  +G+        C     + +   GR
Sbjct: 49  GEVFVCGQ-------NHRGQLGLGHLTDISTLQRCLGLTQTVTNVTCGWDFTLFLTDSGR 101

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
             + G N  GQLG G K        + E  K  +    AG  H++ VT+ G    +G   
Sbjct: 102 VLSCGSNAFGQLGIGQKPAYTADVQIVESLKAAVVSVAAGLRHSLAVTDSGCVYQWGIGL 161

Query: 139 HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             Q      +  + PSPV   +S V  +            V   S+    L + G L   
Sbjct: 162 MSQ-----AKRTLSPSPVPSHLSSVLPSLVPGLNQKMSRVVAAGSMHCVCLTENGDLFLW 216

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
             N+++   SS    + + P P   + L GET+++V  G  H VA    G V+TWG G Y
Sbjct: 217 GSNKHSQLLSSEP--FLSSPTPVERSLLGGETVLRVWSGWTHIVAQTETGRVFTWGRGNY 274

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG------GGQLYMWG 310
           G+LG      +    +     +   LP E     G+   +C +       GG+L  WG
Sbjct: 275 GQLGRHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITCGSEHNLAILGGRLLSWG 332



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 14/126 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKI----------KKAGA 117
           H VA    GR +TWGR   GQLG H    Q       +E  + ++           +   
Sbjct: 256 HIVAQTETGRVFTWGRGNYGQLGRHASTSQSSESQSTTEDQEVRLPEEVPALQGATQITC 315

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G  H + +   G  L++GWN+HG  G GS  +  +P  V  L        CGA  ++ + 
Sbjct: 316 GSEHNLAIL-GGRLLSWGWNEHGMCGDGSHADVFQPQLVPAL--RPLLIGCGAGHSMAVC 372

Query: 178 SVEGAS 183
           +   AS
Sbjct: 373 AAVAAS 378


>gi|348506950|ref|XP_003441020.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like
           [Oreochromis niloticus]
          Length = 651

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 30/300 (10%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
           G E+   G  C   +G   G    + V P +L  L G  +  ++ G      +A D +G+
Sbjct: 160 GNEVFVFGLNCSSCLGTGDGL---STVMPKKLDFLRGKKVASLSYGSGPHVLLATD-DGQ 215

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + WG N   QLG+G       P +++  L   K+K+   G  H++ +T DG   A+G+N
Sbjct: 216 LFAWGHNGYSQLGNGSTNPGLSPVLITANLQNKKVKEVSCGSHHSMALTLDGEVFAWGYN 275

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
             GQ+GSGS  N+  P  V   +    A+      T  ++ V+   +   G    GQLG 
Sbjct: 276 NCGQIGSGSTANQPYPRKVTGCLQGKNASGITCGQTSSMALVDNGEVYGWGYNGNGQLGI 335

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +                Q  P  +AAL G  I ++  G  H +A+  KG +Y WG   
Sbjct: 336 GNNGN--------------QLTPCRVAALQGMCIQQIVSGYGHCLALTDKGLLYAWGANT 381

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG----GQLYMWGKLK 313
           YG+LG   + +   P  +       +   E V+   + +S+ T+      GQ++MWG+ +
Sbjct: 382 YGQLGTGTKSNHLSPVHI-------MADKERVVEVAACHSTHTSAAKTQSGQVFMWGQCR 434



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 31/261 (11%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G   +  + +T       FG N    LG+G   + + P  +  L   +V + + G+   V
Sbjct: 148 GTTANEAIYITHGNEVFVFGLNCSSCLGTGDGLSTVMPKKLDFLRGKKVASLSYGSGPHV 207

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            L++ +G  +   G   Y QLG+G+ N                  P  I A L  + + +
Sbjct: 208 LLATDDG-QLFAWGHNGYSQLGNGSTN--------------PGLSPVLITANLQNKKVKE 252

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD-VFQRNNVLPPEAVISA 292
           V+CG++H++A+   G V+ WG+   G++G     ++  PR+V    Q  N     + I+ 
Sbjct: 253 VSCGSHHSMALTLDGEVFAWGYNNCGQIGSGSTANQPYPRKVTGCLQGKNA----SGITC 308

Query: 293 GSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
           G  +S      G++Y WG        + NNG+  + P  +  L G  ++ + SG  H   
Sbjct: 309 GQTSSMALVDNGEVYGWGYNGNGQLGIGNNGNQ-LTPCRVAALQGMCIQQIVSGYGHCLA 367

Query: 346 GADSSCI-SWGHAQYGELGYG 365
             D   + +WG   YG+LG G
Sbjct: 368 LTDKGLLYAWGANTYGQLGTG 388


>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
 gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
          Length = 1878

 Score =  102 bits (253), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 72/255 (28%), Positives = 119/255 (46%), Gaps = 37/255 (14%)

Query: 74  DVEGRCYTWGRNERGQLGH-------GDKIQRDR---------PTIVSELSKYKIKKAGA 117
           +  GR YT G  +RG+LG+       G++  ++          P IV+     KI +   
Sbjct: 114 EASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKISRISC 173

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADFTVW 175
           G +H++ +++ G   A+G  ++G LG+G + +   P  +    ++  V   A GA  +  
Sbjct: 174 GANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPVKIEAGPTDKKVLHIAAGARHS-- 231

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L   E   +   G    G+LG G              +Y  +  P  I +L+   I  VA
Sbjct: 232 LCCNEDGQVFAWGSNSNGRLGTGG-------------SYGMKTVPTQIKSLSQYHITLVA 278

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G +H+  +DS GY+YTWG GG G+LGH  Q D  +PRR++         P   ++ G+ 
Sbjct: 279 AGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEGISS----LPFVQLTLGAF 334

Query: 296 NSSCTAGGGQLYMWG 310
           NS   +  G++Y+WG
Sbjct: 335 NSMALSQSGEVYIWG 349



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 78/274 (28%), Positives = 124/274 (45%), Gaps = 43/274 (15%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-----PTIVSELSKYK----IKK 114
            C + H + +   G  + WG N+ GQLG   + ++ +      + ++E ++ K    I++
Sbjct: 494 ACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIRR 553

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL--VSEVTA------- 165
              G  H++     GN  ++G    GQLG+G+IRN  EP+ +  L  V EV         
Sbjct: 554 VACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGELYSAC 613

Query: 166 -TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             AC       L ++    +   G    G+LG G        D  +K    A   PR + 
Sbjct: 614 IVACITTGNKDLDTINSGDLWIWGDGDLGKLGLG--------DHVLKSCIAA---PRHLN 662

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
              G  I+KVA G++HT+A+ + G + TWG G YGRLG    K    P ++         
Sbjct: 663 L--GTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTNSTKSHSNPIKIR-------F 713

Query: 285 PPEAV----ISAGSVNSSCTAGGGQLYMWGKLKN 314
           P + V    I+ GS +S   +  G L++WGK +N
Sbjct: 714 PIKGVQIVDIAVGSYHSMAVSSLGDLWVWGKAEN 747



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 80/320 (25%), Positives = 140/320 (43%), Gaps = 41/320 (12%)

Query: 107 LSKYKIKKAGAGRSHTVVVTE---DGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
           L  +   +A +  +H  +V +    G   A+G N +  LG G    E   P  V    + 
Sbjct: 34  LGGHSFTRAASSLNHYFIVAKLKNKGQLYAWGVNTNNVLGLGIENGEFNFPMKVNFFSAL 93

Query: 162 EVTATACGADFT-VWLSSVEGAS--ILNAGLPQYGQLGHGTD-----NEYNTKDSSVKLA 213
           EV   +CG   T V +  +  AS  +   GL   G+LG+        NE++  D +    
Sbjct: 94  EVFQVSCGYSHTAVLVKGISEASGRVYTMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWY 153

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
               P P  +       I +++CG NH++A+   G V+ WG G YG LG  E  D + P 
Sbjct: 154 ---TPIPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQYGCLGTGELNDVYSPV 210

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWM--YPKPLM 326
           +++    +  +     I+AG+ +S C    GQ++ W     G+L   G   M   P  + 
Sbjct: 211 KIEAGPTDKKV---LHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIK 267

Query: 327 DLSGWNLRCMDSGNMHHFVGADSSCI-------SWGHAQYGELGYGPYGQKSSAMPKKVD 379
            LS +++  + +G  H      S CI       +WG+   G+LG+G   Q    +P++++
Sbjct: 268 SLSQYHITLVAAGESH------SGCIDSFGYIYTWGNGGSGKLGHGT--QSDCNIPRRIE 319

Query: 380 ILEGMHVISVACGYGHSLVI 399
            +  +  + +  G  +S+ +
Sbjct: 320 GISSLPFVQLTLGAFNSMAL 339



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 69/263 (26%), Positives = 114/263 (43%), Gaps = 45/263 (17%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   ACG   T+ L  V G +I   G  +YGQLG  T     ++D     ++  +P    
Sbjct: 490 VRQIACGTSHTLLL--VYGGTIFAWGDNKYGQLGIDTRRR-KSQDGDKNESFLNEPTEIK 546

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            +    E I +VACG+ H++  D KG  ++WG G  G+LG    ++ + P  +   +  N
Sbjct: 547 FS----EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLK--N 600

Query: 283 VLPPEAVISAGSVNSSC-------------TAGGGQLYMWGKLKNNGD-------DWMYP 322
           V+     ++ G + S+C             T   G L++WG    +GD       D +  
Sbjct: 601 VIE----VAGGELYSACIVACITTGNKDLDTINSGDLWIWG----DGDLGKLGLGDHVLK 652

Query: 323 KPLMDLSGWNLRC----MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
             +      NL      +  G+ H   + A    I+WG   YG LG      KS + P K
Sbjct: 653 SCIAAPRHLNLGTPIIKVALGSSHTLALTASGELITWGAGYYGRLGTN--STKSHSNPIK 710

Query: 378 VDI-LEGMHVISVACGYGHSLVI 399
           +   ++G+ ++ +A G  HS+ +
Sbjct: 711 IRFPIKGVQIVDIAVGSYHSMAV 733



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 88/376 (23%), Positives = 140/376 (37%), Gaps = 76/376 (20%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
           +AAG  + H +  + +G+ + WG N  G+LG G     +  PT +  LS+Y I    AG 
Sbjct: 224 IAAG--ARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQYHITLVAAGE 281

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
           SH+  +   G    +G    G+LG G                  T + C          +
Sbjct: 282 SHSGCIDSFGYIYTWGNGGSGKLGHG------------------TQSDCNIP-----RRI 318

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-----PRAIAALAGETIVKV 234
           EG S     LP + QL  G  N      S     + A+       P  I A     I  +
Sbjct: 319 EGIS----SLP-FVQLTLGAFNSMALSQSGEVYIWGAKQHEIISLPTKIDAFDSH-ICHI 372

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-------DEWVPRRVDVFQRNNVLPP- 286
             G   + A+D +  +Y W      RL    +K       +E + +R++   +N VL P 
Sbjct: 373 NSGPYISFAMDVRHNIYLWN----NRLLVNSKKSEALNANEEQLYKRMN--SKNPVLLPF 426

Query: 287 --------EAVISAG---------SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
                   + +   G          V+    + GG   +    K+NG   +       + 
Sbjct: 427 FQSKAFVDDCIFYMGFNLVDYKGNKVSYEPKSEGGLFSVNRIYKSNGSSEIGSLVGSQIP 486

Query: 330 GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKS-------SAMPKKVDIL 381
            W++R +  G  H  +      I +WG  +YG+LG     +KS       S + +  +I 
Sbjct: 487 SWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIK 546

Query: 382 EGMHVISVACGYGHSL 397
               +  VACG  HSL
Sbjct: 547 FSEPIRRVACGSWHSL 562



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/194 (24%), Positives = 84/194 (43%), Gaps = 26/194 (13%)

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLP-- 285
           ++ ++ACGT+HT+ +   G ++ WG   YG+LG   R +K +   +          +   
Sbjct: 489 SVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFS 548

Query: 286 -PEAVISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYP-------KPLMDLSGWN 332
            P   ++ GS +S C    G  + WG+     L       +Y        K +++++G  
Sbjct: 549 EPIRRVACGSWHSLCCDIKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEVAGGE 608

Query: 333 L------RCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS-AMPKKVDILEGMH 385
           L       C+ +GN             WG    G+LG G +  KS  A P+ +++  G  
Sbjct: 609 LYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDHVLKSCIAAPRHLNL--GTP 666

Query: 386 VISVACGYGHSLVI 399
           +I VA G  H+L +
Sbjct: 667 IIKVALGSSHTLAL 680



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/227 (25%), Positives = 94/227 (41%), Gaps = 40/227 (17%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--------NEI---EP 153
           S++  + +++   G SHT+++   G   A+G NK+GQLG  + R        NE    EP
Sbjct: 483 SQIPSWSVRQIACGTSHTLLLVYGGTIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEP 542

Query: 154 SPVRCLVSEVTATACGADFTVWLS---SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
           + ++     +   ACG+    W S    ++G +  + G    GQLG G           V
Sbjct: 543 TEIK-FSEPIRRVACGS----WHSLCCDIKG-NCFSWGRGDRGQLGTGAIRNLYEPAGIV 596

Query: 211 KLAYEAQPRPRAIAALAGE--TIVKVACGTNHTVAVDS--KGYVYTWGFGGYGRLG---H 263
            L          I    GE  +   VAC T     +D+   G ++ WG G  G+LG   H
Sbjct: 597 TLK-------NVIEVAGGELYSACIVACITTGNKDLDTINSGDLWIWGDGDLGKLGLGDH 649

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             +     PR +      N+  P   ++ GS ++      G+L  WG
Sbjct: 650 VLKSCIAAPRHL------NLGTPIIKVALGSSHTLALTASGELITWG 690



 Score = 46.2 bits (108), Expect = 0.033,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 2/93 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT+++ L    I  VAAG    H   +D  G  YTWG    G+LGHG +   + P  +  
Sbjct: 263 PTQIKSLSQYHITLVAAG--ESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIEG 320

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           +S     +   G  +++ +++ G    +G  +H
Sbjct: 321 ISSLPFVQLTLGAFNSMALSQSGEVYIWGAKQH 353


>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Sarcophilus harrisii]
          Length = 979

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 22/234 (9%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
           +  L+  +I +   G  H++ +++     ++G NKHGQLG G  ++ +  P  ++ L+  
Sbjct: 131 IKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGI 190

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             T  A G   +  L+ + GA I   G  ++GQLG   +N+                 P 
Sbjct: 191 PFTQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDENDRFV--------------PN 234

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ +    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG       I  P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  +G+ + + G  ++GQLG G                +
Sbjct: 132 KSLTDIQIVQIACGYYHSLALS--KGSEVFSWGQNKHGQLGLG-------------FELK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G    +VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 RQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +++       PR I +L    IV++ACG  H++A+     V++WG   +
Sbjct: 120 GTEEY------IRV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGFELKRQSSPQLI----KSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
           [Metaseiulus occidentalis]
          Length = 1152

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/366 (24%), Positives = 159/366 (43%), Gaps = 39/366 (10%)

Query: 38  GALDGNLVSPTRLRP-LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G ++ ++V   R  P L G+ +R +A G  + H + +   GR  + G N+  QLG   ++
Sbjct: 32  GGIEDHIVRVPRSIPQLEGIRVRQIATG--AHHTLVLTSHGRVLSCGSNDHDQLGQ--EV 87

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSP 155
              +P  V+ L   +I +   G+ H++ +TE G    +G N  GQLG+G    + + P  
Sbjct: 88  STTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQVYMWGSNSKGQLGNGEGQESRLSPRF 147

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           V+ L    V   ACG++  + L  +   ++   G    GQLG GT               
Sbjct: 148 VKTLAPFTVVQIACGSNHCLAL--LNNGALYAWGDNGNGQLGIGT-------------VG 192

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           E Q  P  +  L G  + ++ACG NH++ +   G ++ WG   +G+LG  + KD   P  
Sbjct: 193 EPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTL 252

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP---LMDLSGW 331
           +   ++ +V      I+AG  +S+     G ++ +G        W + +     + L G 
Sbjct: 253 LKTLRQQHV----KFIAAGGAHSAALTAHGGVFTFG--------WSFYESHEVRISLRGT 300

Query: 332 NLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
                 +     F   +       +  YG+LG+G   +     P K+  L G  +  +A 
Sbjct: 301 ESNPQSALARKLFSLIEREFCRHSYGSYGQLGHG--SKNDQLTPMKIQELMGTTITQIAL 358

Query: 392 GYGHSL 397
           G  H++
Sbjct: 359 GRCHTV 364



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/271 (28%), Positives = 129/271 (47%), Gaps = 31/271 (11%)

Query: 82  WGRNERGQLGHG---DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           +G    G+LG G   D I R  P  + +L   ++++   G  HT+V+T  G  L+ G N 
Sbjct: 21  FGNTNSGELGLGGIEDHIVR-VPRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSND 79

Query: 139 HGQLGSGSIRNEIEP-SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
           H QLG      + EP + ++CL   +    CG   ++ L+  E   +   G    GQLG+
Sbjct: 80  HDQLGQEVSTTKPEPVTALQCL--RIVQVCCGQQHSMALT--EAGQVYMWGSNSKGQLGN 135

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G                E++  PR +  LA  T+V++ACG+NH +A+ + G +Y WG  G
Sbjct: 136 GE-------------GQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDNG 182

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
            G+LG     +   P+RV V   N +  P + I+ G+ +S   +  G +++WG  +    
Sbjct: 183 NGQLGIGTVGE---PQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGSNRFGQL 239

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
             ++  D  +P  L  L   +++ + +G  H
Sbjct: 240 GLSDNKDRAFPTLLKTLRQQHVKFIAAGGAH 270



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 145/337 (43%), Gaps = 75/337 (22%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGR 78
           G +L CGS   D +G+         VS T+  P+  +  +R V   C   H +A+   G+
Sbjct: 70  GRVLSCGSNDHDQLGQE--------VSTTKPEPVTALQCLRIVQVCCGQQHSMALTEAGQ 121

Query: 79  CYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            Y WG N +GQLG+G+ +  R  P  V  L+ + + +   G +H + +  +G   A+G N
Sbjct: 122 VYMWGSNSKGQLGNGEGQESRLSPRFVKTLAPFTVVQIACGSNHCLALLNNGALYAWGDN 181

Query: 138 KHGQLGSGSIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            +GQLG G++  E +  PV     L   ++  ACGA+ ++ LS  +   I   G  ++GQ
Sbjct: 182 GNGQLGIGTV-GEPQRVPVEVTNLLGLPLSQIACGANHSMVLS--KSGVIFVWGSNRFGQ 238

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG  +DN    KD +          P  +  L  + +  +A G  H+ A+ + G V+T+G
Sbjct: 239 LGL-SDN----KDRAF---------PTLLKTLRQQHVKFIAAGGAHSAALTAHGGVFTFG 284

Query: 255 ----------------------------------------FGGYGRLGHREQKDEWVPRR 274
                                                   +G YG+LGH  + D+  P +
Sbjct: 285 WSFYESHEVRISLRGTESNPQSALARKLFSLIEREFCRHSYGSYGQLGHGSKNDQLTPMK 344

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGG-GQLYMWG 310
           +       +      I+ G  ++ C A   G+++ +G
Sbjct: 345 IQELMGTTI----TQIALGRCHTVCYAPTVGKVFTFG 377



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 92/217 (42%), Gaps = 30/217 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+G+ +  +A G  + H + +   G  + WG N  GQLG  D   R  PT++  
Sbjct: 198 PVEVTNLLGLPLSQIACG--ANHSMVLSKSGVIFVWGSNRFGQLGLSDNKDRAFPTLLKT 255

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  +K   AG +H+  +T  G    FGW+ +            E   VR  +    + 
Sbjct: 256 LRQQHVKFIAAGGAHSAALTAHGGVFTFGWSFY------------ESHEVRISLRGTESN 303

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A      S +E           YGQLGHG+ N+              Q  P  I  L
Sbjct: 304 PQSALARKLFSLIE-REFCRHSYGSYGQLGHGSKND--------------QLTPMKIQEL 348

Query: 227 AGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
            G TI ++A G  HTV    + G V+T+G GG G+LG
Sbjct: 349 MGTTITQIALGRCHTVCYAPTVGKVFTFGLGGNGQLG 385



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 115/280 (41%), Gaps = 40/280 (14%)

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNA 187
           +L FG    G+LG G I + I   P      E   V   A GA  T+ L+S     +L+ 
Sbjct: 18  TLGFGNTNSGELGLGGIEDHIVRVPRSIPQLEGIRVRQIATGAHHTLVLTS--HGRVLSC 75

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   + QLG     E +T             +P  + AL    IV+V CG  H++A+   
Sbjct: 76  GSNDHDQLGQ----EVSTT------------KPEPVTALQCLRIVQVCCGQQHSMALTEA 119

Query: 248 GYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGG 304
           G VY WG    G+LG+ E Q+    PR V        L P  V+     ++ C A    G
Sbjct: 120 GQVYMWGSNSKGQLGNGEGQESRLSPRFV------KTLAPFTVVQIACGSNHCLALLNNG 173

Query: 305 QLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGH 356
            LY WG   N        G+    P  + +L G  L  +  G  H  V + S  I  WG 
Sbjct: 174 ALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLLGLPLSQIACGANHSMVLSKSGVIFVWGS 233

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            ++G+LG      K  A P  +  L   HV  +A G  HS
Sbjct: 234 NRFGQLGLS--DNKDRAFPTLLKTLRQQHVKFIAAGGAHS 271



 Score = 44.7 bits (104), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 66/182 (36%), Gaps = 52/182 (28%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR+I  L G  + ++A G +HT+ + S G V + G   + +LG      +  P  V   Q
Sbjct: 42  PRSIPQLEGIRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQEVSTTK--PEPVTALQ 99

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
              ++     +  G  +S      GQ+YM                               
Sbjct: 100 CLRIVQ----VCCGQQHSMALTEAGQVYM------------------------------- 124

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                         WG    G+LG G  GQ+S   P+ V  L    V+ +ACG  H L +
Sbjct: 125 --------------WGSNSKGQLGNGE-GQESRLSPRFVKTLAPFTVVQIACGSNHCLAL 169

Query: 400 VD 401
           ++
Sbjct: 170 LN 171


>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
           and BTB (POZ) domain containing protein 1 [Ciona
           intestinalis]
          Length = 554

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 86/312 (27%), Positives = 130/312 (41%), Gaps = 34/312 (10%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  L    G  I  ++AG    H + +  +G  Y+WG N   QLG+G       P+++
Sbjct: 87  LEPRLLESFSGQKIISLSAGS-GPHVLVLTQDGGVYSWGHNSYMQLGNGGTSPGTSPSLL 145

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SE 162
           S     K+ +   G  H++ +T +G    +G+N  GQ+GSGS  N+  P  V   +    
Sbjct: 146 SRNISNKVVQIACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKR 205

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +    CG   T  L   +   + + G    GQLG G  N  N            Q  P  
Sbjct: 206 IIDITCGQ--TTSLCVTDSGEVYSWGYNGNGQLGVG--NNVN------------QTNPCR 249

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +AAL G  I +V CG  H +A+   G V+ WG   YG+LG   + +   P +V   +   
Sbjct: 250 VAALQGVVIAQVVCGYAHALALTDNGVVFGWGANSYGQLGSGNKANTCTPLQVAT-RIGR 308

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           V+   A   + S  S+     G +YMWG+L+        P    DL+             
Sbjct: 309 VVCLAATHYSHS--SAARNQSGHIYMWGQLRQQATPEPKPTNFTDLNAV----------- 355

Query: 343 HFVGADSSCISW 354
            F G  S  +SW
Sbjct: 356 -FAGFSSPPVSW 366



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 17/211 (8%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG 129
           +   ++ + Y+ G N  G LG GD      P ++   S  KI    AG   H +V+T+DG
Sbjct: 59  IFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDG 118

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEPSPV-RCLVSEVTATACGADFTVWLSSVEGASILNAG 188
              ++G N + QLG+G       PS + R + ++V   ACG+  ++ L++ EG  +   G
Sbjct: 119 GVYSWGHNSYMQLGNGGTSPGTSPSLLSRNISNKVVQIACGSHHSMALTT-EG-EVYTWG 176

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQ+G G+             A +  PR +  A +  + I+ + CG   ++ V   G
Sbjct: 177 YNNCGQIGSGST------------ANQGSPR-KVTACIGNKRIIDITCGQTTSLCVTDSG 223

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            VY+WG+ G G+LG     ++  P RV   Q
Sbjct: 224 EVYSWGYNGNGQLGVGNNVNQTNPCRVAALQ 254



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 120/289 (41%), Gaps = 28/289 (9%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
           G   +  +  T D    + G N  G LG G   + +EP  +     + + + + G+   V
Sbjct: 52  GQSATEVIFTTLDEKVYSLGTNTSGCLGVGDNSSSLEPRLLESFSGQKIISLSAGSGPHV 111

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            + + +G  + + G   Y QLG+G                     P  ++      +V++
Sbjct: 112 LVLTQDGG-VYSWGHNSYMQLGNG--------------GTSPGTSPSLLSRNISNKVVQI 156

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++A+ ++G VYTWG+   G++G     ++  PR+V     N  +     I+ G 
Sbjct: 157 ACGSHHSMALTTEGEVYTWGYNNCGQIGSGSTANQGSPRKVTACIGNKRIID---ITCGQ 213

Query: 295 VNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
             S C    G++Y WG   N      N  +   P  +  L G  +  +  G  H     D
Sbjct: 214 TTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQTNPCRVAALQGVVIAQVVCGYAHALALTD 273

Query: 349 SSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +  +  WG   YG+LG G   + ++  P +V    G  V   A  Y HS
Sbjct: 274 NGVVFGWGANSYGQLGSG--NKANTCTPLQVATRIGRVVCLAATHYSHS 320


>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
           magnipapillata]
          Length = 809

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 154/364 (42%), Gaps = 28/364 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L+G DIR VA G  + H +AV V G  ++WG    G+LG  + + R  P  +  
Sbjct: 397 PRVVEALLGRDIRTVACG--TEHTLAVSVNGEMFSWGCGRGGKLGLKNILDRYMPLKIGA 454

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-CLVSEVTA 165
                I        H+  VTE G    FG +      +   R +  P  V     +++ A
Sbjct: 455 FENVNITFVSCNELHSASVTESGELYTFGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKA 514

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            +CG +FT+ L+S EG  + + G    GQLG G  N+                 P  I  
Sbjct: 515 VSCGLEFTIALNS-EG-ELYSFGKNDCGQLGAGHFNDIE--------------EPYLIKH 558

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G  I KV+CG+ H  AV   G V+ WG   +G+LG  + +   +P        N  + 
Sbjct: 559 LNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFWNEEIQ 618

Query: 286 PEAVISAGSVNSSCTA-----GGGQLYMWGKLKNNGDDWMYPKPLMDL-SGWNLRCMDSG 339
                 + +V  SCT      G GQ    G   N    ++    ++ + +   +  +D G
Sbjct: 619 DIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVAVNQTSPYITNPCILSMPNNTKIAKVDCG 678

Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H     +S C+ +WG+   G LG+G +  +   +P  V+ L    V S+ACG  H+  
Sbjct: 679 IEHTAAVTESGCLYTWGNGSRGRLGHGDHQDR--YVPTLVESLAYKQVQSIACGAYHTAA 736

Query: 399 IVDR 402
            V R
Sbjct: 737 CVIR 740



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 96/223 (43%), Gaps = 27/223 (12%)

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           +   I   G    G LGHG + E              +  PR + AL G  I  VACGT 
Sbjct: 371 DACDIYTWGASPKGVLGHGEETE--------------ELFPRVVEALLGRDIRTVACGTE 416

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           HT+AV   G +++WG G  G+LG +   D ++P ++  F+  N+      +S   ++S+ 
Sbjct: 417 HTLAVSVNGEMFSWGCGRGGKLGLKNILDRYMPLKIGAFENVNI----TFVSCNELHSAS 472

Query: 300 TAGGGQLYMWGK----LKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHHFVGADS--SCI 352
               G+LY +G+    L    +D     P  +D S  N     S  +   +  +S     
Sbjct: 473 VTESGELYTFGRSGPHLGYTTEDRKQAVPRKVDFSTANKIKAVSCGLEFTIALNSEGELY 532

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
           S+G    G+LG G +       P  +  L G+ +  V+CG  H
Sbjct: 533 SFGKNDCGQLGAGHFNDIEE--PYLIKHLNGVRISKVSCGSKH 573


>gi|322785446|gb|EFZ12117.1| hypothetical protein SINV_05294 [Solenopsis invicta]
          Length = 585

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 124/278 (44%), Gaps = 33/278 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG-------RCYTWGRNERGQLGHGDKIQRD 99
           P ++  L   DI+  A G    H +A+  EG       + Y+WG N   +LG+G   Q  
Sbjct: 113 PKKVDALCEKDIKMFAYGS-GPHVLALTKEGEVRLYLRKVYSWGHNGYCELGNGTCNQGL 171

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            PT V+ L   +I     G  H+V + EDG   A+G N  GQ GS    N+  P  V   
Sbjct: 172 YPTQVNSLGIKRIVDIACGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVNSN 231

Query: 160 VS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           ++  +V   ACG   TV L  +E   +   G    GQLG G               Y  Q
Sbjct: 232 LAGKKVAQIACGQTSTVAL--LENGEVYGWGYNGVGQLGIGN--------------YVNQ 275

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  I  L G  IVKVACG  HT+A+  +G +Y WG   YG+LG   + +   P  V  
Sbjct: 276 MTPCRIGTLLGTVIVKVACGYVHTLALTDEGQLYVWGGNSYGQLGISNKTNACNPVLVK- 334

Query: 278 FQRNNVLPPEAVISAGSVNSSCTA--GGGQLYMWGKLK 313
               + +   + I+A   N +  A   GG++YMWG  +
Sbjct: 335 ----HEMGRVSDIAALHYNHTSVAVGEGGRVYMWGHCR 368



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/241 (27%), Positives = 104/241 (43%), Gaps = 30/241 (12%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR-SHTVVVTEDG-------NS 131
           Y  G N  G LG GD      P  V  L +  IK    G   H + +T++G         
Sbjct: 92  YALGSNIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALTKEGEVRLYLRKV 151

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLP 190
            ++G N + +LG+G+    + P+ V  L +  +   ACG+  +V L+  E   I   G  
Sbjct: 152 YSWGHNGYCELGNGTCNQGLYPTQVNSLGIKRIVDIACGSHHSVALN--EDGEIYAWGQN 209

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDSKGY 249
             GQ G                    Q  PR + + LAG+ + ++ACG   TVA+   G 
Sbjct: 210 NCGQAGSSITTN--------------QGVPRQVNSNLAGKKVAQIACGQTSTVALLENGE 255

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           VY WG+ G G+LG     ++  P R+       ++     ++ G V++      GQLY+W
Sbjct: 256 VYGWGYNGVGQLGIGNYVNQMTPCRIGTLLGTVIVK----VACGYVHTLALTDEGQLYVW 311

Query: 310 G 310
           G
Sbjct: 312 G 312



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 71/287 (24%), Positives = 114/287 (39%), Gaps = 71/287 (24%)

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEG 181
           ++VT D    A G N  G LG+G   + + P  V  L   ++   A G+   V   + EG
Sbjct: 83  LIVTRDKMVYALGSNIAGCLGTGDAHSTLYPKKVDALCEKDIKMFAYGSGPHVLALTKEG 142

Query: 182 A------SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
                   + + G   Y +LG+GT N+                 P  + +L  + IV +A
Sbjct: 143 EVRLYLRKVYSWGHNGYCELGNGTCNQ--------------GLYPTQVNSLGIKRIVDIA 188

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           CG++H+VA++  G +Y WG    G+ G     ++ VPR+V+    N      A I+ G  
Sbjct: 189 CGSHHSVALNEDGEIYAWGQNNCGQAGSSITTNQGVPRQVN---SNLAGKKVAQIACGQT 245

Query: 296 NSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWG 355
           ++      G++Y WG    NG                                       
Sbjct: 246 STVALLENGEVYGWGY---NG--------------------------------------- 263

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
               G+LG G Y  + +  P ++  L G  ++ VACGY H+L + D 
Sbjct: 264 ---VGQLGIGNYVNQMT--PCRIGTLLGTVIVKVACGYVHTLALTDE 305


>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
           porcellus]
          Length = 531

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL V  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPMRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLNPEHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  S     S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSTHI--SAAKTQGGHVYMWGQCR 314



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 136/303 (44%), Gaps = 37/303 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   G   +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEVASIRKACVFGTSANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHVKRVVGIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPMRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +  +  ++E   V+
Sbjct: 231 HRVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLNPEHIMVEKERVV 287

Query: 388 SVA 390
            +A
Sbjct: 288 EIA 290



 Score = 38.9 bits (89), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPMRVAALHRVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLN 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +H       G
Sbjct: 276 PEHIMVEKERVVEIAACHSTHISAAKTQG 304


>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
           [Amphimedon queenslandica]
          Length = 599

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 165/394 (41%), Gaps = 58/394 (14%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           +AV  +   + G++VS  RL          V  G +    +  D     Y WG  +RG+L
Sbjct: 125 EAVSAKLVEMRGSIVSEDRLE---------VQLGTIKTKVLLKDNSCDLYLWGGGDRGRL 175

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
           GH D   R  P +V  L    +     G SHT+ +   G   ++G    G LG G++R+ 
Sbjct: 176 GHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNSKGQVFSWGAGPQGCLGHGNLRDR 235

Query: 151 IEP----SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
             P     P+R +   V   AC  + +  +S        +  L  +G+ G          
Sbjct: 236 YSPLMIDGPLRDV--NVVHVACYENHSAVISE-------DGNLYTWGKAG----PFLGYM 282

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
           D SV      Q +PR + AL G  IV+VACG +HT+ +D +G VY++G   +G LG    
Sbjct: 283 DDSV----TKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELGQGHD 338

Query: 267 ----KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD 317
               K   VP  V + +          +S G  +S+     G L+MW     G+L     
Sbjct: 339 KAITKPTMVPNLVSICK----------VSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEP 388

Query: 318 DWMY-PKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGY--GPYGQKSSA 373
             ++ P P+   +   L  +  G  H   + A+     WG     + G     YG+ SS 
Sbjct: 389 KSLFSPTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSS- 447

Query: 374 MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
            P+ + +  G+    + CG   ++++   T++G+
Sbjct: 448 -PRGIVLPSGIRPTQINCGANFTVLV---TSIGQ 477



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/278 (28%), Positives = 119/278 (42%), Gaps = 23/278 (8%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
           W   G   G +D ++   T+ R +  +   R V   C   H + +D EGR Y++G N+ G
Sbjct: 272 WGKAGPFLGYMDDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFG 331

Query: 89  QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR 148
           +LG G      +PT+V  L    I K   GR H+  + EDG    +GW   GQLG G  +
Sbjct: 332 ELGQGHDKAITKPTMVPNL--VSICKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPK 389

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           +   P+PV     + +   +CG   T        A+I   G+      G    ++     
Sbjct: 390 SLFSPTPVNGFNDQPLEDVSCGYGHT--------AAITANGVAYC--WGDNASSQCGVPS 439

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
           S     Y     PR I   +G    ++ CG N TV V S G ++TWG    G+LG+ E K
Sbjct: 440 S----VYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWGCNMSGQLGNGEAK 495

Query: 268 DEWV-PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
             +  P  V+      V     +++ G  +  C  G G
Sbjct: 496 KTFSQPMPVESLSEKRV----KMVACGEDHIGCLVGHG 529



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 92/218 (42%), Gaps = 32/218 (14%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           D  +  PT +  LV +        C   H  A+D +G  + WG   RGQLG G+      
Sbjct: 338 DKAITKPTMVPNLVSI----CKVSCGRHHSAAIDEDGVLFMWGWGARGQLGQGEPKSLFS 393

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS--------GSIRNEIE 152
           PT V+  +   ++    G  HT  +T +G +  +G N   Q G          S R  + 
Sbjct: 394 PTPVNGFNDQPLEDVSCGYGHTAAITANGVAYCWGDNASSQCGVPSSVYGELSSPRGIVL 453

Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
           PS +R      T   CGA+FTV ++S+    +   G    GQLG+G              
Sbjct: 454 PSGIR-----PTQINCGANFTVLVTSI--GQLFTWGCNMSGQLGNGE------------- 493

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           A +   +P  + +L+ + +  VACG +H   +   G+V
Sbjct: 494 AKKTFSQPMPVESLSEKRVKMVACGEDHIGCLVGHGWV 531


>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
          Length = 1983

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 18/268 (6%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG--HGDKIQRDRPTIV 104
           P R+  L  + + F+A G  S    A+   G+ YTWG++ +G+LG   G  +    P +V
Sbjct: 544 PKRIETLAKMSVVFIACGKDST--AALTDTGKVYTWGKSAQGKLGLGSGKPLAIVVPQLV 601

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCL-VSE 162
            +LS + + +   GR+H    T+      +G N  GQLG   I + + +P  +  L  + 
Sbjct: 602 QDLSSHVVCQISLGRNHAACSTDMHKFFVWGSNTFGQLGIPHISSYMPDPYEITSLREAN 661

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           + + ACG   T  L S    S+++ G   +GQLGHG D E  T  S     ++     + 
Sbjct: 662 IRSIACGGWHT--LISTNTGSVMSCGKGWHGQLGHG-DYESLTALSKTLPYFK-----KI 713

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +       IVKV+ G   + A+ +KG ++TWG G   +LGH   K+E  PR V+ F +  
Sbjct: 714 VEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIR 773

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           V+     +S G  +       G  Y WG
Sbjct: 774 VVD----VSIGDSHMLALDYSGLPYSWG 797



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 31/216 (14%)

Query: 73  VDVEG-RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           ++++G   + WG  E G+LG+  +  +  P IV       +K    G+ HT+ ++ DG  
Sbjct: 85  IELQGSHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSADGVV 144

Query: 132 LAFGWNKHGQLGSG----SIRNEI-EPSPVRCL---------VSEVTATACGADFTVWLS 177
           L+ G N +GQLG G    S    + EPS  + L         ++ +   A G   ++ L+
Sbjct: 145 LSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALN 204

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             +   I + G   +G+LG G+D    +              PR +A+L    +V +ACG
Sbjct: 205 --DTGKIFSWGSGSWGKLGIGSDANAES--------------PRFVASLQNSKVVHIACG 248

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
            +HT A+ + G V+TWG G  G+LGH+  K+E+ PR
Sbjct: 249 AHHTAAITTVGDVWTWGKGLRGQLGHKSVKEEFSPR 284



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 23/268 (8%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            +P  +R L  V I  VA  C + HC+A+  E R Y WG  + G  G  +      P  +S
Sbjct: 1685 TPVEIRSLNTVKIMKVA--CGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELS 1742

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSEVT 164
             L+   I    AG  H+  +++ G+   +G N +GQLG G+    E  P+ +  L   V 
Sbjct: 1743 SLAACSIIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVM 1802

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
              + GA+ +  L  V   ++   GL   GQLG G   + +T                A+ 
Sbjct: 1803 DVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLT--------------AVD 1848

Query: 225  ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNN 282
            AL    IV  +CG  HT AV   G + TWG G  G+LG +    KD   P ++     + 
Sbjct: 1849 ALDDRQIVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICND- 1907

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
               P   +  G   +   +  G+LYM G
Sbjct: 1908 ---PMVKVVCGQEVTIVVSEKGELYMAG 1932



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 119/304 (39%), Gaps = 56/304 (18%)

Query: 57   DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ------RDRPTIVSELSKY 110
            + + V   C   H +A   +G  Y WG  +RGQLG  +            P  V  L +Y
Sbjct: 1212 NTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRY 1271

Query: 111  KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-ATACG 169
             I     GR H + +T +   L++G  + GQLG     ++  P  V+ L         CG
Sbjct: 1272 FILSIACGRWHNMTLTSERQVLSWGAGEFGQLGLDHNLSKGTPQMVKALDGRAPCKILCG 1331

Query: 170  ADFTVWLSS--VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR-------- 219
                 W S+  +E   IL  G   YGQLGHG     +    +  L  E + R        
Sbjct: 1332 G----WHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANH 1387

Query: 220  ---------------------------------PRAIAALAGETIVKVACGTNHTVAVDS 246
                                             P +I  L G+ I +VA G  H++A+  
Sbjct: 1388 TLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSV 1447

Query: 247  KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
             G V++WG   +G+LGH    D+  P    + +R+ + P    I+ G   S+  +  G++
Sbjct: 1448 FGEVWSWGGSPFGQLGHETITDKLAP--TPLLERHKIPPDVKSIACGYTFSAAMSAKGEV 1505

Query: 307  YMWG 310
            + WG
Sbjct: 1506 FTWG 1509



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 148/356 (41%), Gaps = 46/356 (12%)

Query: 73   VDVEGR--CYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDG 129
            VD+EG    YTWG    G+LGHG       P  I S  S  KI +   G  H++  + DG
Sbjct: 1173 VDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDG 1232

Query: 130  NSLAFGWNKHGQLGS------GSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGA 182
               A+G    GQLGS        I     P PV  L    + + ACG    + L+S    
Sbjct: 1233 GVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNMTLTSER-- 1290

Query: 183  SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
             +L+ G  ++GQLG   +    T              P+ + AL G    K+ CG  H+ 
Sbjct: 1291 QVLSWGAGEFGQLGLDHNLSKGT--------------PQMVKALDGRAPCKILCGGWHSA 1336

Query: 243  AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR------------NNVLPPEAVI 290
            A+   G +  WG   YG+LGH + K    P RV+ + R            N+ L    V+
Sbjct: 1337 AILESGKILLWGKNVYGQLGHGDTKSCSAP-RVNQYLRLEGKVRTAGLGANHTL---VVM 1392

Query: 291  SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
             A  V +  +   GQL +    +   +    P  + +L+G N+  + +G+ H   +    
Sbjct: 1393 VANKVFAMGSNIDGQLGLDDPSRTGKN---VPVSIEELNGKNICQVAAGDQHSLALSVFG 1449

Query: 350  SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               SWG + +G+LG+     K +  P          V S+ACGY  S  +  +  V
Sbjct: 1450 EVWSWGGSPFGQLGHETITDKLAPTPLLERHKIPPDVKSIACGYTFSAAMSAKGEV 1505



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 95/423 (22%), Positives = 169/423 (39%), Gaps = 93/423 (21%)

Query: 45   VSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            ++PT L  R  +  D++ +A  C      A+  +G  +TWG  E G+LGH  K+    P+
Sbjct: 1471 LAPTPLLERHKIPPDVKSIA--CGYTFSAAMSAKGEVFTWGNGESGELGHAPKVLTYAPS 1528

Query: 103  IVSELS---------KYKIKKAGAGRSHTVVVTEDGN----------SLAFG-------- 135
            ++ + S         K+        R  T+ +T   N          S+A G        
Sbjct: 1529 LIKDFSEVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRS 1588

Query: 136  -----------------WNKHG-----------QLGSGSIRNEIEPSPVRCLV-SEVTAT 166
                               +HG           QLG   ++    PS ++ L+ + +   
Sbjct: 1589 HTTGHHTTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHI 1648

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
            +  +D + +++  +  S+  +G  ++G+LG G                   P P  I +L
Sbjct: 1649 SANSDMSAFVT--DSGSLYVSGGSEHGRLGLG--------------HMAPAPTPVEIRSL 1692

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
                I+KVACGT H +A+  +  VY WG G +G  G     D   P+ +      +++  
Sbjct: 1693 NTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLAACSIIG- 1751

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
               + AG  +S+  +  G L+MWGK  +NG   +      + S   +  +D   M   +G
Sbjct: 1752 ---VHAGGFHSAALSQYGDLFMWGK-NSNGQLGLGTTSAAEDSPTKISNLDGVVMDVSLG 1807

Query: 347  ADSSCI----------SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            A+ S +          + G    G+LG G +  +S+     VD L+   ++S +CG  H+
Sbjct: 1808 ANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTA--VDALDDRQIVSASCGAAHT 1865

Query: 397  LVI 399
              +
Sbjct: 1866 AAV 1868



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 148/403 (36%), Gaps = 78/403 (19%)

Query: 65   CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-KYKIKKAGAGRSHTV 123
            C   H  A+   G+   WG+N  GQLGHGD      P +   L  + K++ AG G +HT+
Sbjct: 1330 CGGWHSAAILESGKILLWGKNVYGQLGHGDTKSCSAPRVNQYLRLEGKVRTAGLGANHTL 1389

Query: 124  VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVE 180
            VV       A G N  GQLG        +  PV         +   A G   ++ LS   
Sbjct: 1390 VVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQHSLALSVF- 1448

Query: 181  GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
               + + G   +GQLGH T  +        KLA    P P          +  +ACG   
Sbjct: 1449 -GEVWSWGGSPFGQLGHETITD--------KLA----PTPLLERHKIPPDVKSIACGYTF 1495

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR-------------------- 280
            + A+ +KG V+TWG G  G LGH  +   + P  +  F                      
Sbjct: 1496 SAAMSAKGEVFTWGNGESGELGHAPKVLTYAPSLIKDFSEVVQIACGFKHMAGIVFKPRM 1555

Query: 281  ------------NNVLPPEAVISAGSVNSSCTAGG-------------------GQLYMW 309
                        +N       I+AGSV+ S  +                     G +++W
Sbjct: 1556 KTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSAFSASNQKRHGCVFVW 1615

Query: 310  -----GKLKNNGDDWMYPKPLMD--LSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGEL 362
                 G+L   G        LM   L+   +    + +M  FV    S    G +++G L
Sbjct: 1616 GEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDSGSLYVSGGSEHGRL 1675

Query: 363  GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G G      +  P ++  L  + ++ VACG  H L + +   V
Sbjct: 1676 GLGHMA--PAPTPVEIRSLNTVKIMKVACGTYHCLALTEEKRV 1716



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 155/410 (37%), Gaps = 64/410 (15%)

Query: 50  LRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
             P +   +R   A  + C   H + +   G+ Y+ G N  GQLG GD   R  PT+V+ 
Sbjct: 281 FSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTG 340

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
            +  K+    A    ++ +T  G   AFG      L    I   +   P   L+  V  T
Sbjct: 341 FANEKVIDIDAKGCRSIALTNTGKVFAFGNETEPHLNR--IPRFVAGLPKSDLIIAVART 398

Query: 167 ACGADFTV--------W--LSSVEGASILNAGL---------------------PQYGQL 195
           A   DF +        W   SS E +S +                         P+ G  
Sbjct: 399 A-HFDFAISDTGQLFRWRPFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCT 457

Query: 196 GHGTDNEYNTKDSS--VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK---GYV 250
                   +T  SS   + + E  P  + + AL   T       T       S+   GY+
Sbjct: 458 QAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEYLDEFATVQVRDSPSREGDGYI 517

Query: 251 YTWGFGGYGRLGH-----REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           YT+G G +GRLGH     R ++    P+R++   + +V+     I+ G  +++     G+
Sbjct: 518 YTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVV----FIACGKDSTAALTDTGK 573

Query: 306 LYMWGKLKNNGDDWMYPKPL--------MDLSGWNLRCMDSGNMHHFVGAD-SSCISWGH 356
           +Y WGK           KPL         DLS   +  +  G  H     D      WG 
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVG 406
             +G+LG  P+       P ++  L   ++ S+ACG  H+L+    TN G
Sbjct: 634 NTFGQLGI-PHISSYMPDPYEITSLREANIRSIACGGWHTLI---STNTG 679



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 87/342 (25%), Positives = 145/342 (42%), Gaps = 75/342 (21%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDR-----PTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
           +G  YT+G+   G+LGHG +  R       P  +  L+K  +     G+  T  +T+ G 
Sbjct: 514 DGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGK 573

Query: 131 SLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVSEVTA--------TACGAD---FTVWLS 177
              +G +  G+LG GS +    + P  V+ L S V           AC  D   F VW S
Sbjct: 574 VYTWGKSAQGKLGLGSGKPLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVWGS 633

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           +             +GQLG    + Y              P P  I +L    I  +ACG
Sbjct: 634 NT------------FGQLGIPHISSY-------------MPDPYEITSLREANIRSIACG 668

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKD--------EWVPRRVDVFQRNNVLPPEAV 289
             HT+   + G V + G G +G+LGH + +          +  + V+ F  + ++     
Sbjct: 669 GWHTLISTNTGSVMSCGKGWHGQLGHGDYESLTALSKTLPYFKKIVEGFGDSFIVK---- 724

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM----------YPKPLMDLSGWNLRCMD-S 338
           +SAG  +S+     G+L+ WGK    GD++           YP+ +   +   +R +D S
Sbjct: 725 VSAGKESSAAITNKGRLFTWGK----GDEYQLGHESSKNEAYPREVEFFA--KIRVVDVS 778

Query: 339 GNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMPKKV 378
               H +  D S +  SWG+   G+LG+G   ++ + +P+ +
Sbjct: 779 IGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERET-LPRPI 819



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 109/257 (42%), Gaps = 36/257 (14%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK--------------IKK 114
           H + +  +G   + G N  GQLG GD +   R T VSE SK K              I  
Sbjct: 134 HTLFLSADGVVLSCGSNVYGQLGMGDHM-LSRSTPVSEPSKQKSLDKLQAIIQSLNNIVG 192

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFT 173
             AG  H++ + + G   ++G    G+LG GS  N   P  V  L  S+V   ACGA  T
Sbjct: 193 IAAGYYHSLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHT 252

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             +++V        GL   GQLGH           SVK  +     PR  A+L      K
Sbjct: 253 AAITTVGDVWTWGKGL--RGQLGH----------KSVKEEFS----PRLNASLRKCGAQK 296

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           + CG +HT+ +   G +Y+ G   +G+LG  +  D  +P  V  F    V+     I A 
Sbjct: 297 IRCGDDHTLVILRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANEKVID----IDAK 352

Query: 294 SVNSSCTAGGGQLYMWG 310
              S      G+++ +G
Sbjct: 353 GCRSIALTNTGKVFAFG 369



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 90/404 (22%), Positives = 151/404 (37%), Gaps = 54/404 (13%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G++   GS  W  +G      D N  SP  +  L    +  +A  C + H  A+   G  
Sbjct: 207 GKIFSWGSGSWGKLGI---GSDANAESPRFVASLQNSKVVHIA--CGAHHTAAITTVGDV 261

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           +TWG+  RGQLGH    +   P + + L K   +K   G  HT+V+   G   + G N H
Sbjct: 262 WTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIRCGDDHTLVILRSGQLYSMGANTH 321

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE----VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQLG G   + I P+ V    +E    + A  C              ++ N G  +    
Sbjct: 322 GQLGLGDATDRIIPTLVTGFANEKVIDIDAKGC-----------RSIALTNTG--KVFAF 368

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL-AGETIVKVACGTNHTVAVDSKGYVYTW- 253
           G+ T+   N               PR +A L   + I+ VA   +   A+   G ++ W 
Sbjct: 369 GNETEPHLNRI-------------PRFVAGLPKSDLIIAVARTAHFDFAISDTGQLFRWR 415

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNN----VLPPEAVISAGSVNSSCTAGGGQLYMW 309
            F          +    +   V +F  +N    +  PE   +   ++ + +         
Sbjct: 416 PFSSEEESSRMLESFHAIKGVVRMFCGHNHMAVICSPEMGCTQAMISRNKSTSFSSDISR 475

Query: 310 GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA-----DSSCISWGHAQYGELGY 364
             L+    + + P       G N   +D         +     D    ++G   +G LG+
Sbjct: 476 ASLEKFPSEKILPA-----LGTNTEYLDEFATVQVRDSPSREGDGYIYTYGKGVFGRLGH 530

Query: 365 G---PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G      ++S   PK+++ L  M V+ +ACG   +  + D   V
Sbjct: 531 GVEYTRSEESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKV 574



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 29/227 (12%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +G+LGHG   EY   + SVK        P+ I  LA  ++V +ACG + T A+   G VY
Sbjct: 525 FGRLGHGV--EYTRSEESVK-------HPKRIETLAKMSVVFIACGKDSTAALTDTGKVY 575

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMW 309
           TWG    G+LG    K    P  + V Q    L    V  IS G  +++C+    + ++W
Sbjct: 576 TWGKSAQGKLGLGSGK----PLAIVVPQLVQDLSSHVVCQISLGRNHAACSTDMHKFFVW 631

Query: 310 GK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGE 361
           G        + +       P  +  L   N+R +  G  H  +  ++ S +S G   +G+
Sbjct: 632 GSNTFGQLGIPHISSYMPDPYEITSLREANIRSIACGGWHTLISTNTGSVMSCGKGWHGQ 691

Query: 362 LGYGPYGQ---KSSAMPKKVDILEGM---HVISVACGYGHSLVIVDR 402
           LG+G Y      S  +P    I+EG     ++ V+ G   S  I ++
Sbjct: 692 LGHGDYESLTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNK 738



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 70/304 (23%), Positives = 127/304 (41%), Gaps = 45/304 (14%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGN--LVSPTRLRPLVGV--------DIRFVAAGCVSCH 69
           G +L CGS  +  +G     L  +  +  P++ + L  +        +I  +AAG    H
Sbjct: 142 GVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYY--H 199

Query: 70  CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
            +A++  G+ ++WG    G+LG G     + P  V+ L   K+     G  HT  +T  G
Sbjct: 200 SLALNDTGKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVHIACGAHHTAAITTVG 259

Query: 130 NSLAFGWNKHGQLGSGSIRNEIEP----SPVRCLVSEVTATACGADFTVWLSSVEGASIL 185
           +   +G    GQLG  S++ E  P    S  +C   ++    CG D T+ +  +    + 
Sbjct: 260 DVWTWGKGLRGQLGHKSVKEEFSPRLNASLRKCGAQKIR---CGDDHTLVI--LRSGQLY 314

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
           + G   +GQLG G        D++ ++       P  +   A E ++ +      ++A+ 
Sbjct: 315 SMGANTHGQLGLG--------DATDRII------PTLVTGFANEKVIDIDAKGCRSIALT 360

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           + G V+ +G          E     +PR V    +++++   A  +      S T   GQ
Sbjct: 361 NTGKVFAFG-------NETEPHLNRIPRFVAGLPKSDLIIAVARTAHFDFAISDT---GQ 410

Query: 306 LYMW 309
           L+ W
Sbjct: 411 LFRW 414



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/274 (24%), Positives = 111/274 (40%), Gaps = 29/274 (10%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SP+ ++ L+   I  ++A   S     V   G  Y  G +E G+LG G       P  + 
Sbjct: 1633 SPSLMQSLLATSIVHISAN--SDMSAFVTDSGSLYVSGGSEHGRLGLGHMAPAPTPVEIR 1690

Query: 106  ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             L+  KI K   G  H + +TE+    A+G  K G  G  +  + +EP  +  L      
Sbjct: 1691 SLNTVKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSLA----- 1745

Query: 166  TACGADFTVWLSSVEGASILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRA 222
             AC       +  V      +A L QYG L   G  ++ +     +S      A+  P  
Sbjct: 1746 -ACS------IIGVHAGGFHSAALSQYGDLFMWGKNSNGQLGLGTTSA-----AEDSPTK 1793

Query: 223  IAALAGETIVKVACGTNHTVAVD--SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            I+ L G  ++ V+ G NH+  +   +   ++T G    G+LG  +  D      VD    
Sbjct: 1794 ISNLDG-VVMDVSLGANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDD 1852

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
              ++      S G+ +++  +  G L  WG  +N
Sbjct: 1853 RQIVSA----SCGAAHTAAVSQYGDLITWGNGRN 1882



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 20/178 (11%)

Query: 239  NHTVAVDSKG--YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
            N    VD +G  ++YTWG G  GRLGH        P+ +  F  N  +     ++ G  +
Sbjct: 1168 NKRYEVDLEGEYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKI---VEVACGCEH 1224

Query: 297  SSCTAGGGQLYMW--------GKLKNNG----DDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
            S   +  G +Y W        G L+N      +    P+P+++L  + +  +  G  H+ 
Sbjct: 1225 SLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRYFILSIACGRWHNM 1284

Query: 345  -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             + ++   +SWG  ++G+LG       S   P+ V  L+G     + CG  HS  I++
Sbjct: 1285 TLTSERQVLSWGAGEFGQLGLDH--NLSKGTPQMVKALDGRAPCKILCGGWHSAAILE 1340



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 87/184 (47%), Gaps = 10/184 (5%)

Query: 131 SLAFGWN--KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNA 187
           S  F W   ++G+LG+ S   +  P  V    +  V   A G   T++LS+     +L+ 
Sbjct: 90  SHVFMWGDGENGKLGNQSEEIQHVPYIVPAFRNVLVKVCALGKQHTLFLSA--DGVVLSC 147

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G   YGQLG G      +   S     ++  + +AI   +   IV +A G  H++A++  
Sbjct: 148 GSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQ-SLNNIVGIAAGYYHSLALNDT 206

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G +++WG G +G+LG     +   PR V   Q + V+     I+ G+ +++     G ++
Sbjct: 207 GKIFSWGSGSWGKLGIGSDANAESPRFVASLQNSKVVH----IACGAHHTAAITTVGDVW 262

Query: 308 MWGK 311
            WGK
Sbjct: 263 TWGK 266



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           A+  +GR +TWG+ +  QLGH        P  V   +K ++     G SH + +   G  
Sbjct: 734 AITNKGRLFTWGKGDEYQLGHESSKNEAYPREVEFFAKIRVVDVSIGDSHMLALDYSGLP 793

Query: 132 LAFGWNKHGQLGSGSI-RNEIEPSPV 156
            ++G    GQLG G +   E  P P+
Sbjct: 794 YSWGNGSAGQLGHGEMCERETLPRPI 819



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 23/176 (13%)

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-------ISAGSVNSSCTA 301
           +V+ WG G  G+LG++ ++ + VP  V  F RN ++   A+       +SA  V  SC +
Sbjct: 91  HVFMWGDGENGKLGNQSEEIQHVPYIVPAF-RNVLVKVCALGKQHTLFLSADGVVLSCGS 149

Query: 302 G-GGQLYMWGKLKNNGDDWMYPKPLMDLSGW--------NLRCMDSGNMHHFVGADSSCI 352
              GQL M   + +       P     L           N+  + +G  H     D+  I
Sbjct: 150 NVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNNIVGIAAGYYHSLALNDTGKI 209

Query: 353 -SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
            SWG   +G+LG G      S  P+ V  L+   V+ +ACG  H+  I   T VG+
Sbjct: 210 FSWGSGSWGKLGIGSDANAES--PRFVASLQNSKVVHIACGAHHTAAI---TTVGD 260



 Score = 39.3 bits (90), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 3/50 (6%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---RPTIV 104
           IR V       H +A+D  G  Y+WG    GQLGHG+  +R+   RP ++
Sbjct: 772 IRVVDVSIGDSHMLALDYSGLPYSWGNGSAGQLGHGEMCERETLPRPIML 821


>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
          Length = 1046

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 26/259 (10%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G +  CGS     +G  KG     LV     + + GV        C   H +AV+ +G+ 
Sbjct: 53  GSVYTCGSNSCGQLGHDKGGSRPELVGALDAQKISGV-------SCGQAHSLAVNEQGQV 105

Query: 80  YTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           + WG  + GQLG G   +  R P ++ +L +++I +   G  H + +++DG    +G N 
Sbjct: 106 FAWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENS 165

Query: 139 HGQLGSGSIR-NEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            GQLG G    + + P P++ L    +T  + G D +  LS     ++   G    GQLG
Sbjct: 166 SGQLGLGKGEPSTLSPQPLKSLCGIPLTQISAGGDHSFALSF--SGAVFGWGKNSAGQLG 223

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
              +     +D +V         P  I  L  + +V ++CG  HT A+  +G ++T+G G
Sbjct: 224 LNDE-----QDRAV---------PCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNG 269

Query: 257 GYGRLGHREQKDEWVPRRV 275
             G+LGH   ++E +PRRV
Sbjct: 270 SKGQLGHDSTRNEPLPRRV 288



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 156/360 (43%), Gaps = 36/360 (10%)

Query: 29  CWDAVGRRK---GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRN 85
           CW + G  +   GA + ++  P       G  ++ VA G  + H + +  +G  YT G N
Sbjct: 4   CWGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACG--NQHSLFLLHDGSVYTCGSN 61

Query: 86  ERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
             GQLGH DK    RP +V  L   KI     G++H++ V E G   A+G    GQLG G
Sbjct: 62  SCGQLGH-DK-GGSRPELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLG 119

Query: 146 SIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
           +    +  P  ++ L    ++   CG    + LS  +   +   G    GQLG G     
Sbjct: 120 TAEEAVRVPRLIKKLCEHRISQVMCGNHHCIALS--KDGQLFVWGENSSGQLGLG----- 172

Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
             K     L+      P+ + +L G  + +++ G +H+ A+   G V+ WG    G+LG 
Sbjct: 173 --KGEPSTLS------PQPLKSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLGL 224

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY 321
            +++D  VP  +   +   V+     IS G  +++     G L+ +G       G D   
Sbjct: 225 NDEQDRAVPCHIKFLRSQKVV----YISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTR 280

Query: 322 PKPL----MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
            +PL    M+L G  +  +  G  H   FV +     ++G    G+LG G  G   S +P
Sbjct: 281 NEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVP 340



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/182 (33%), Positives = 85/182 (46%), Gaps = 6/182 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G+L   G      +G  KG  + + +SP  L+ L G+ +  ++AG    H  A+   G
Sbjct: 154 KDGQLFVWGENSSGQLGLGKG--EPSTLSPQPLKSLCGIPLTQISAG--GDHSFALSFSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WG+N  GQLG  D+  R  P  +  L   K+     G  HT  +T++G    FG  
Sbjct: 210 AVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             GQLG  S RNE  P  V  L+ +EV+  ACG + T+      G  I   G    GQLG
Sbjct: 270 SKGQLGHDSTRNEPLPRRVMELMGTEVSQIACGRNHTLAFVPSTGL-IYAFGCNTQGQLG 328

Query: 197 HG 198
            G
Sbjct: 329 TG 330



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 33/332 (9%)

Query: 82  WGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG +  GQLG G  +     P          +K+   G  H++ +  DG+    G N  G
Sbjct: 5   WGSSGAGQLGIGASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCG 64

Query: 141 QLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           QLG    +    P  V  L   +++  +CG   +  L+  E   +   G    GQLG GT
Sbjct: 65  QLGHD--KGGSRPELVGALDAQKISGVSCGQAHS--LAVNEQGQVFAWGAGDGGQLGLGT 120

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                        A EA   PR I  L    I +V CG +H +A+   G ++ WG    G
Sbjct: 121 -------------AEEAVRVPRLIKKLCEHRISQVMCGNHHCIALSKDGQLFVWGENSSG 167

Query: 260 RLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
           +LG  + +     P+ +    ++    P   ISAG  +S   +  G ++ WGK       
Sbjct: 168 QLGLGKGEPSTLSPQPL----KSLCGIPLTQISAGGDHSFALSFSGAVFGWGKNSAGQLG 223

Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS 371
            N+  D   P  +  L    +  +  G  H   +  +    ++G+   G+LG+     ++
Sbjct: 224 LNDEQDRAVPCHIKFLRSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHD--STRN 281

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
             +P++V  L G  V  +ACG  H+L  V  T
Sbjct: 282 EPLPRRVMELMGTEVSQIACGRNHTLAFVPST 313



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C   H  A+  EG  +T+G   +GQLGH        P  V EL   ++ +   G
Sbjct: 243 KVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTEVSQIACG 302

Query: 119 RSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
           R+HT+  V   G   AFG N  GQLG+G   +   P PV
Sbjct: 303 RNHTLAFVPSTGLIYAFGCNTQGQLGTGIRGSAKSPVPV 341


>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
           griseus]
 gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
          Length = 531

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q   P  + +
Sbjct: 65  PKKLEALCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL    V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            + ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VSIACGQ--TSSMAVLDSGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALQSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  S  +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSTHT--SAAKTQGGHVYMWGQCR 314



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 34/292 (11%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+KA   GA  +  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQETASIRKACVFGASANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEA 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N             +  
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTN-------------QGI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 APVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               + L  + V+S   G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TSCLHTKRVVSIACGQTSSMAVLDSGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD 379
               +  +  G  H     D   + +WG   YG+LG G      S  P  V+
Sbjct: 231 QSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLSPTPIMVE 282



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G K     
Sbjct: 218 NGNQLTPVRVAALQSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGSKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           PT +    +  ++ A    +HT      G
Sbjct: 276 PTPIMVEKERVVEIAACHSTHTSAAKTQG 304



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/189 (22%), Positives = 72/189 (38%), Gaps = 54/189 (28%)

Query: 220 PRAIAALAGETIVKVACGTN-HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           P+ + AL G+ I  ++ G+  H +     G VY WG  GY +LG+        P +V   
Sbjct: 65  PKKLEALCGKKIKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQV--- 121

Query: 279 QRNNVLPPEAV-ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
              N+L  + V ++ GS +S   A  G++                               
Sbjct: 122 -CTNLLIKQVVEVACGSHHSMALAADGEV------------------------------- 149

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHS 396
                          +WG+   G++G G    + +  P+KV   L    V+S+ACG   S
Sbjct: 150 --------------FAWGYNNCGQVGSGSTANQPT--PRKVTSCLHTKRVVSIACGQTSS 193

Query: 397 LVIVDRTNV 405
           + ++D   V
Sbjct: 194 MAVLDSGEV 202


>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Sarcophilus harrisii]
          Length = 1057

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 22/234 (9%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
           +  L+  +I +   G  H++ +++     ++G NKHGQLG G  ++ +  P  ++ L+  
Sbjct: 131 IKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGI 190

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             T  A G   +  L+ + GA I   G  ++GQLG   +N+                 P 
Sbjct: 191 PFTQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDENDRFV--------------PN 234

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ +    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG       I  P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  +G+ + + G  ++GQLG G                +
Sbjct: 132 KSLTDIQIVQIACGYYHSLALS--KGSEVFSWGQNKHGQLGLG-------------FELK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G    +VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 RQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +++       PR I +L    IV++ACG  H++A+     V++WG   +
Sbjct: 120 GTEEY------IRV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGFELKRQSSPQLI----KSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
            africana]
          Length = 4858

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4040 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4096

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4097 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4156

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +SS +G+ +   G   YG+
Sbjct: 4157 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSS-DGSMVWAFGDGDYGK 4215

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4216 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4261

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4262 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4317

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4318 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4351



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3992 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4048

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4049 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4107

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4108 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4153

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4154 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4179

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V +D S + ++G   YG+LG G    
Sbjct: 4180 ----------------LEGYQIGQVACGLNHTLAVSSDGSMVWAFGDGDYGKLGLGNSTA 4223

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4224 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4252



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 LVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     R +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIRKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4279 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4336

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4337 LQGKNVRQISAGRCHSAAWT 4356



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|224127630|ref|XP_002329325.1| predicted protein [Populus trichocarpa]
 gi|222870779|gb|EEF07910.1| predicted protein [Populus trichocarpa]
          Length = 392

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 148/337 (43%), Gaps = 31/337 (9%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            E     WG  E GQLG G+  +++   IV  L  YK++   AG  +++ + +DG    +
Sbjct: 3   TESSVIAWGSGEDGQLGIGNNEEKEWVCIVKALEPYKVRSVVAGSRNSLAICDDGKLFTW 62

Query: 135 GWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           GWN+ G LG     + E  PS V+ L +     A    +       +G +    G  +YG
Sbjct: 63  GWNQRGTLGHPPETKTENIPSQVKALANVNIVQAAIGGWHCLAVDDQGRAYAWGG-NEYG 121

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           Q G     E   KD + +        P+  A+     + +VA G  H+V +  +G+V++W
Sbjct: 122 QCGE----EPERKDDTGRPLRRDIVIPQRCASKL--VVRQVAAGGTHSVVLTREGHVWSW 175

Query: 254 GFGGYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           G               W P   +++ V  R   L    +I+ G+ ++      G L+ WG
Sbjct: 176 G-------------QPWPPGDIKQISVPVRVQGLERVRLIAVGAFHNLALQEDGTLWAWG 222

Query: 311 KLK----NNGDDWMYPKPL--MDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
             +      GD     +P+    LSG  L  + +G  H   +  D     WG  ++G LG
Sbjct: 223 NNEYGQLGTGDTQPRSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLG 282

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +G   + S  +P++V++L G  ++ V+CG  HS+ + 
Sbjct: 283 FGDNDKSSKMVPQRVNLLVGEDIVQVSCGGTHSVALT 319



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 132/277 (47%), Gaps = 41/277 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH--------GDKIQR 98
           P++++ L  V+I  V A     HC+AVD +GR Y WG NE GQ G         G  ++R
Sbjct: 82  PSQVKALANVNI--VQAAIGGWHCLAVDDQGRAYAWGGNEYGQCGEEPERKDDTGRPLRR 139

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           D        SK  +++  AG +H+VV+T +G+  ++G         G I+    P  V+ 
Sbjct: 140 DIVIPQRCASKLVVRQVAAGGTHSVVLTREGHVWSWG----QPWPPGDIKQISVPVRVQG 195

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           L   V   A GA   + L   E  ++   G  +YGQLG G                + QP
Sbjct: 196 L-ERVRLIAVGAFHNLALQ--EDGTLWAWGNNEYGQLGTG----------------DTQP 236

Query: 219 R--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRR 274
           R  P  +  L+G T+V +A G  H+ A+   G VY WG G +GRLG    ++  + VP+R
Sbjct: 237 RSQPITVQGLSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQR 296

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           V++    +++     +S G  +S      G++Y +G+
Sbjct: 297 VNLLVGEDIVQ----VSCGGTHSVALTRDGRMYTFGR 329



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 16/204 (7%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L    +R +A G    H +A+  +G  + WG NE GQLG GD   R +P  V  
Sbjct: 190 PVRVQGLE--RVRLIAVGAF--HNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPITVQG 245

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSE-V 163
           LS   +    AG  H+  +T+DG    +G  +HG+LG G     +++ P  V  LV E +
Sbjct: 246 LSGLTLVDIAAGGWHSTALTDDGEVYGWGRGEHGRLGFGDNDKSSKMVPQRVNLLVGEDI 305

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +CG   +V L+      +   G   +G+LG+G      T    +++  +  P P+ +
Sbjct: 306 VQVSCGGTHSVALT--RDGRMYTFGRGDHGRLGYG---RKVTTGQPMEVPIDIPP-PKNL 359

Query: 224 --AALAGETIVK-VACGTNHTVAV 244
             +  AG  I K VA G  HT+A+
Sbjct: 360 TDSGDAGRWIAKLVASGGRHTLAI 383


>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
            garnettii]
          Length = 4828

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4010 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4066

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4067 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4126

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4127 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4185

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4186 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4231

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4232 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASNGDVYAWGSNSE 4287

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4288 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4321



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3962 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4018

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4019 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4077

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4078 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4123

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4124 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4149

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4150 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4193

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4194 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4222



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4249 PQQIPVLAGVVIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4306

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4307 LQGKNIRQISAGRCHSAAWT 4326



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Sarcophilus harrisii]
          Length = 1049

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 118/234 (50%), Gaps = 22/234 (9%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS- 161
           +  L+  +I +   G  H++ +++     ++G NKHGQLG G  ++ +  P  ++ L+  
Sbjct: 131 IKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKRQSSPQLIKSLLGI 190

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
             T  A G   +  L+ + GA I   G  ++GQLG   +N+                 P 
Sbjct: 191 PFTQVAAGGAHSFVLT-LSGA-IFGWGRNKFGQLGLNDENDRFV--------------PN 234

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 235 LLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 147/351 (41%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ +    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG       I  P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  +G+ + + G  ++GQLG G                +
Sbjct: 132 KSLTDIQIVQIACGYYHSLALS--KGSEVFSWGQNKHGQLGLG-------------FELK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G    +VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 RQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +++       PR I +L    IV++ACG  H++A+     V++WG   +
Sbjct: 120 GTEEY------IRV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGFELKRQSSPQLI----KSLLGIPFTQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
 gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
          Length = 1028

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 160/379 (42%), Gaps = 55/379 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L  +  +D + +A G  S H V V  +G+ ++WG +  G+LGHG      +P ++  
Sbjct: 289 PKALDRIAALDAQIIACG--SKHAVIVTKQGQIFSWGESSGGKLGHGADADVSQPKVIDA 346

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVSEV- 163
           LS+  +     G  HT  VT  GN   +G + H  G LG GS  +   P  V   +  V 
Sbjct: 347 LSESNVVLVACGEFHTCAVTVSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIESVR 406

Query: 164 -TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
            +  +CG   T  +SS     +   G   +G LGHG  +  +              +PR 
Sbjct: 407 ISFVSCGPWHTAAVSS--QGKLFTFGDGTFGALGHGDRSSTS--------------KPRE 450

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   +KV+CG  HT AV               G ++TWG G  G+LGH +++   
Sbjct: 451 VESLKGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRL 510

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG--GQLYM-----WGKLKNNGDDWMYPK 323
           VP  V +        P  V      +S   A    GQ+Y      +G+L +       P 
Sbjct: 511 VPSCVSM--------PAGVCQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPI 562

Query: 324 PLM-DLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
               D+   +++ +  G+ HH V   S+    +WG    G+LG+G    K    P  V  
Sbjct: 563 HTDGDIRNCHIKQIACGS-HHVVALSSNGDVYTWGKGINGQLGHGDI--KDRHTPTLVKA 619

Query: 381 LEGMHVISVACGYGHSLVI 399
           L+   V SV CG   + VI
Sbjct: 620 LKHKQVKSVVCGSNFTAVI 638



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 105/220 (47%), Gaps = 18/220 (8%)

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
           N Y+ K S + +  +A   P+A+  +A      +ACG+ H V V  +G +++WG    G+
Sbjct: 272 NMYDVKSSPI-MRMDAL-LPKALDRIAALDAQIIACGSKHAVIVTKQGQIFSWGESSGGK 329

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---- 316
           LGH    D   P+ +D    +NV+    +++ G  ++      G LY WG   +N     
Sbjct: 330 LGHGADADVSQPKVIDALSESNVV----LVACGEFHTCAVTVSGNLYTWGDDTHNTGYLG 385

Query: 317 -----DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
                  W+  + +  +    +  +  G  H   V +     ++G   +G LG+G   + 
Sbjct: 386 HGSAVSHWIPREVIGQIESVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHG--DRS 443

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLD 410
           S++ P++V+ L+G+  + V+CG  H+  ++D  N  +RLD
Sbjct: 444 STSKPREVESLKGLRTLKVSCGIWHTAAVIDFINESDRLD 483


>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
          Length = 598

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 144/338 (42%), Gaps = 44/338 (13%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           YTWGR++ GQ G G       P  V  L    +  A  G  ++  VT DG     G N  
Sbjct: 40  YTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGELYTTGSNDA 99

Query: 140 GQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
            QLG       +EP  V  L ++ V   ACG      L+ V+   +   G  +YGQLG G
Sbjct: 100 RQLGVKGREVALEPIRVSALEMNNVHGVACGQGHM--LAVVDNGHLAAWGSNEYGQLGTG 157

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                         A  AQ  PR +  + G    +VA G  H++A+ S G VY++G G +
Sbjct: 158 EVG-----------ASAAQ--PRVLKRIRGAHFARVAAGATHSLALTSSGQVYSFGEGSF 204

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGKLK--- 313
           G LGH +  +   P  V        L PEA++S  AG   S+  +  G+++ WG+ K   
Sbjct: 205 GALGHGDVNNRAKPTLV------QALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQ 258

Query: 314 -NNGD--DWMYPKPLMDL-SGWNLRCMDSGNMHHFVGAD--SSCISWGHAQYGELGYGPY 367
             NG+  +   P+P+  +     + C D    HH +         +WG    G+LG G  
Sbjct: 259 LGNGEFGNAFLPQPVPGIEQAVQVACGD----HHCIALTRWGEVYTWGLHSSGQLGQG-S 313

Query: 368 GQKSSAM------PKKVDILEGMHVISVACGYGHSLVI 399
              S A+      P +VD L    +  V+ G  HS  +
Sbjct: 314 NLGSEALNGCLCSPSRVDSLADQSIRQVSAGARHSFFV 351



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 165/387 (42%), Gaps = 40/387 (10%)

Query: 33  VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           +G+     D N  +P  ++ L G D+   A G  +   V  D  G  YT G N+  QLG 
Sbjct: 47  LGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRD--GELYTTGSNDARQLGV 104

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI-RNEI 151
             +     P  VS L    +     G+ H + V ++G+  A+G N++GQLG+G +  +  
Sbjct: 105 KGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQLGTGEVGASAA 164

Query: 152 EPSPV-RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
           +P  + R   +     A GA  ++ L+S     + + G   +G LGHG  N         
Sbjct: 165 QPRVLKRIRGAHFARVAAGATHSLALTS--SGQVYSFGEGSFGALGHGDVNN-------- 214

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW 270
                 + +P  + AL  E IV +A G   + AV   G V+TWG   YG+LG+ E  + +
Sbjct: 215 ------RAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKYGQLGNGEFGNAF 268

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW--------GKLKNNGDDWM-- 320
           +P+ V   ++         ++ G  +       G++Y W        G+  N G + +  
Sbjct: 269 LPQPVPGIEQ------AVQVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNLGSEALNG 322

Query: 321 ---YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
               P  +  L+  ++R + +G  H F  +    + WG     E         S A+P +
Sbjct: 323 CLCSPSRVDSLADQSIRQVSAGARHSFFVSPGEQL-WGAGANDEGQLALQSVPSVALPTR 381

Query: 378 VDILEGMHVISVACGYGHSLVIVDRTN 404
           V  L G+ +        HS+ ++D ++
Sbjct: 382 VPGLPGLPMRFAVAAGDHSIAVLDESS 408



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 111/256 (43%), Gaps = 14/256 (5%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G L   GS  +  +G   G +  +   P  L+ + G     VAAG  + H +A+   G+ 
Sbjct: 141 GHLAAWGSNEYGQLG--TGEVGASAAQPRVLKRIRGAHFARVAAG--ATHSLALTSSGQV 196

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y++G    G LGHGD   R +PT+V  L    I    AG   +  V+  G    +G NK+
Sbjct: 197 YSFGEGSFGALGHGDVNNRAKPTLVQALWPEAIVSIAAGEYFSAAVSLSGRVFTWGRNKY 256

Query: 140 GQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           GQLG+G   N   P PV   + +    ACG    + L+      +   GL   GQLG G+
Sbjct: 257 GQLGNGEFGNAFLPQPVPG-IEQAVQVACGDHHCIALT--RWGEVYTWGLHSSGQLGQGS 313

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
           +      +  +         P  + +LA ++I +V+ G  H+  V     ++  G    G
Sbjct: 314 NLGSEALNGCLC-------SPSRVDSLADQSIRQVSAGARHSFFVSPGEQLWGAGANDEG 366

Query: 260 RLGHREQKDEWVPRRV 275
           +L  +      +P RV
Sbjct: 367 QLALQSVPSVALPTRV 382



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 12/163 (7%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           +YTWG    G+ G    ++   P  V   Q  +V+      + GS NS+     G+LY  
Sbjct: 39  LYTWGRSDLGQTGSGRDQNSTAPEPVQALQGKDVV----HAAGGSYNSAFVTRDGELYTT 94

Query: 310 G-----KLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCIS-WGHAQYGEL 362
           G     +L   G +  + P  +  L   N+  +  G  H     D+  ++ WG  +YG+L
Sbjct: 95  GSNDARQLGVKGREVALEPIRVSALEMNNVHGVACGQGHMLAVVDNGHLAAWGSNEYGQL 154

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G G  G  S+A P+ +  + G H   VA G  HSL +     V
Sbjct: 155 GTGEVG-ASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQV 196


>gi|301618542|ref|XP_002938670.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Xenopus
           (Silurana) tropicalis]
          Length = 1029

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 121/262 (46%), Gaps = 28/262 (10%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G LL CG   +  +GR+        +S    + +V +        C + H VAV  EG  
Sbjct: 53  GTLLSCGQNPYGQLGRKSNNSSIEQISSLEAQTIVDI-------SCGTNHSVAVSDEGSI 105

Query: 80  YTWGRNERGQLGHGDKIQRD-RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           Y+WG    GQLG G+   R+  P  ++ L   KI +   G  H++ ++EDG   ++G NK
Sbjct: 106 YSWGDGSEGQLGTGNLSSRNFTPKKITGLFNTKIIQISCGNFHSLALSEDGRVFSWGQNK 165

Query: 139 HGQLGSGS-IRNEIEPSPVRCL--VSEVTATACGAD-FTVWLSSVEGASILNAGLPQYGQ 194
            GQLG GS I N+  P  V+ L  +  V  TA G+  F + +S     ++   G    GQ
Sbjct: 166 CGQLGLGSQIINQATPQLVKSLKGIPLVQVTAGGSQSFALSMS----GTVFAWGKNNAGQ 221

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG  +D    T             +P A+ +L    +  ++CG  HT  +   G VYT+G
Sbjct: 222 LGFKSDPMKGTF------------KPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFG 269

Query: 255 FGGYGRLGHREQKDEWVPRRVD 276
              +G+LG        VP++++
Sbjct: 270 DDTHGQLGQNSGNQTSVPQKIE 291



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 47/343 (13%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-----IKKAGAGRSHTVVVTEDGNSLAF 134
           Y WG N  GQL     +Q ++  +  + + Y      ++K   G  HT+ + EDG  L+ 
Sbjct: 2   YCWGDNCFGQLAL---LQGEKEVVHFKENDYFQSQECVQKVSCGEKHTLYLLEDGTLLSC 58

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G N +GQLG  S  + IE   +  L ++ +   +CG + +V +S  EG SI + G    G
Sbjct: 59  GQNPYGQLGRKSNNSSIE--QISSLEAQTIVDISCGTNHSVAVSD-EG-SIYSWGDGSEG 114

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG G  +  N               P+ I  L    I++++CG  H++A+   G V++W
Sbjct: 115 QLGTGNLSSRNFT-------------PKKITGLFNTKIIQISCGNFHSLALSEDGRVFSW 161

Query: 254 GFGGYGRLGHREQ-KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
           G    G+LG   Q  ++  P+ V   +      P   ++AG   S   +  G ++ WG  
Sbjct: 162 GQNKCGQLGLGSQIINQATPQLVKSLKG----IPLVQVTAGGSQSFALSMSGTVFAWG-- 215

Query: 313 KNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGE 361
           KNN     +          P  +  L    +  +  G  H  V   D S  ++G   +G+
Sbjct: 216 KNNAGQLGFKSDPMKGTFKPHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQ 275

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           LG     Q S  +P+K++   G  V  VACG  H+L+ V   N
Sbjct: 276 LGQNSGNQTS--VPQKIEDYAG-QVSQVACGRYHTLLYVFSCN 315



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 4/129 (3%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--R 100
           N  +P  ++ L G+ +  V AG       A+ + G  + WG+N  GQLG      +   +
Sbjct: 177 NQATPQLVKSLKGIPLVQVTAG--GSQSFALSMSGTVFAWGKNNAGQLGFKSDPMKGTFK 234

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P  V+ L    +     G  HT V+++DG+   FG + HGQLG  S      P  +    
Sbjct: 235 PHAVNSLRNLGVAYISCGEEHTAVLSKDGSVYTFGDDTHGQLGQNSGNQTSVPQKIEDYA 294

Query: 161 SEVTATACG 169
            +V+  ACG
Sbjct: 295 GQVSQVACG 303


>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
 gi|223942555|gb|ACN25361.1| unknown [Zea mays]
 gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
           protein [Zea mays]
          Length = 480

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 120/409 (29%), Positives = 163/409 (39%), Gaps = 62/409 (15%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  + +L  P  L P +     G  +R+    C   H  AV  +G  +TWG NE GQL
Sbjct: 34  RKGK-ECHLRIPKSLPPKLFKLGNGKSLRWTDIACGREHTAAVASDGSLFTWGANEFGQL 92

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
           G G +     P  V  L    +K    G   T  V E    DG  S +  W      GS 
Sbjct: 93  GDGTEDSAKEPKKVKSLETEFVKSVSCGAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSD 152

Query: 146 SIR---NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
             R       P+ V      +   +CGA   + LS  E   +   G  +YGQLG G  ++
Sbjct: 153 YPRLFWGAFTPNTV------IKQVSCGAVHVMALS--EDGLLQAWGYNEYGQLGRGRTSQ 204

Query: 203 YNTKDSSVKLAYE--AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
              + + V  AY       P  +       IV+V+CG  HT A+   G VYTWG G  G+
Sbjct: 205 -GLQGARVLNAYARFLDDAPEQV------KIVRVSCGEYHTAAISENGEVYTWGLGSMGQ 257

Query: 261 LGH---REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG------- 310
           LGH   +   +E +PRRV       V      +S G V+S     GG LY WG       
Sbjct: 258 LGHCSLQSGDNELIPRRVVALDGIVV----GDVSCGGVHSCAVTEGGALYAWGGGHVGQL 313

Query: 311 ---------KLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQYG 360
                        NG D +     + +    +R    G+ H  V   D     WG+  YG
Sbjct: 314 GVGPQGGFFSCSLNGSDMLLRNIPVLVIPSGVRLATCGHSHTLVSMKDGRIYGWGYNSYG 373

Query: 361 ELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           +       +KS+    P  VD   G  V  +A G GHS V+ D  ++ E
Sbjct: 374 Q----ATNEKSTYAWFPSPVDWCVG-EVRRLAAGGGHSAVLTDACSLKE 417


>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 747

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 169/394 (42%), Gaps = 72/394 (18%)

Query: 28  TCWDAVGRRKGAL-DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWG 83
           T W     R G L DG + +   P ++  L GV    V     + HCVA+   G  +TWG
Sbjct: 220 TVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGV----VTLSAGASHCVALRSNGTAWTWG 275

Query: 84  RNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG 143
            N  GQLG G   QR  P   +++    +  A AG  H++ V  DG   A+G N++ QLG
Sbjct: 276 LNTMGQLGDGTTTQRSVP---AQVGLTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLG 332

Query: 144 SGSIRNEIEPSPVRCLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQL 195
           +G++ + +   P++  +S       G        AD TVW          + G   +GQL
Sbjct: 333 NGNMTSSLL--PIQAGLSGGITLVAGFKHSLTLRADGTVW----------SWGDNVFGQL 380

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G GT   Y  + S V++A      P             VA G  H+V  DS G V++WG 
Sbjct: 381 GDGT---YQPRMSPVRVATTTLGNP------------GVASGQLHSVYRDSAGRVWSWGD 425

Query: 256 GGYGRLGHREQKDEWVPR------RVDVFQRNN---VLPPEAVISAGSVNSSCTAGGGQL 306
              G+LG+    D+  P        V V   N    VL  +  + A  VNS    G G  
Sbjct: 426 NEDGQLGNGIGADKLTPALTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVNSRGEVGDG-- 483

Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
                   N +    P  ++ LSG  +  + +G  H   +  D +  +WG  +YG+LG G
Sbjct: 484 -------TNANT-SQPVRVLGLSG--ITAISAGAYHSLALRTDGTVWAWGFNRYGQLGNG 533

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             G      P +V  L G  V ++A G+ HSL +
Sbjct: 534 --GTVDQNQPVQVAGLSG--VTAIAAGHSHSLAL 563



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 49/275 (17%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           + N   P R+  L G  I  ++AG    H +A+  +G  + WG N  GQLG+G  + +++
Sbjct: 485 NANTSQPVRVLGLSG--ITAISAGA--YHSLALRTDGTVWAWGFNRYGQLGNGGTVDQNQ 540

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL- 159
           P  V+ LS   +    AG SH++ +  DG   A+G+N  GQ+GSG+  N     PV+ + 
Sbjct: 541 PVQVAGLSG--VTAIAAGHSHSLALCGDGTVWAWGYNFDGQIGSGT--NNWHILPVQAVG 596

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT-------------- 205
           +S VTA   G   ++ L S    ++ + G    GQLG+G     N               
Sbjct: 597 LSSVTAITAGGYHSLALRS--DGTVWSWGYNGSGQLGNGALASLNAPGPVSNLTGVVSIA 654

Query: 206 ----------KDSSVK---LAYEAQ---------PRPRAIAALAGETIVKVACGTNHTVA 243
                      D +V+     ++ Q           P  +A ++G  +V V  G +H++A
Sbjct: 655 AGDYHSLALRSDGTVRAWGFNFDGQIGDGSLTNRHVPVMVAGMSG--VVSVIAGDHHSMA 712

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           + S G  + WG    G+LG   + D  +P RV++F
Sbjct: 713 MRSDGTTWAWGANTEGQLGDGTRNDSIIPVRVELF 747



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 156/338 (46%), Gaps = 40/338 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H + +  +G  ++WG N  GQLG G    R  P  V+  +      A +G+ H+V     
Sbjct: 359 HSLTLRADGTVWSWGDNVFGQLGDGTYQPRMSPVRVATTTLGNPGVA-SGQLHSVYRDSA 417

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   ++G N+ GQLG+G   +++ P+ +  L   V+  A G   TV L      ++   G
Sbjct: 418 GRVWSWGDNEDGQLGNGIGADKLTPA-LTGLTGAVSVVA-GNRHTVVLKG--DTTVWAWG 473

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
           +   G++G GT+            A  +QP    +  L    I  ++ G  H++A+ + G
Sbjct: 474 VNSRGEVGDGTN------------ANTSQP----VRVLGLSGITAISAGAYHSLALRTDG 517

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WGF  YG+LG+    D+  P +V        L     I+AG  +S    G G ++ 
Sbjct: 518 TVWAWGFNRYGQLGNGGTVDQNQPVQVAG------LSGVTAIAAGHSHSLALCGDGTVWA 571

Query: 309 WG-----KLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           WG     ++ +  ++W + P   + LS  ++  + +G  H   + +D +  SWG+   G+
Sbjct: 572 WGYNFDGQIGSGTNNWHILPVQAVGLS--SVTAITAGGYHSLALRSDGTVWSWGYNGSGQ 629

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           LG G     ++  P  V  L G  V+S+A G  HSL +
Sbjct: 630 LGNGALASLNA--PGPVSNLTG--VVSIAAGDYHSLAL 663



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 147/347 (42%), Gaps = 60/347 (17%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H V V  +G  + WG N +GQLG+G  +  + PT V   +        +G SH++ +  D
Sbjct: 61  HSVGVHSDGSVWAWGFNRQGQLGNG--LFTNSPTPVKVKNLTDAVAVASGDSHSLALRSD 118

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N  GQLG+GS     EP  V+ L S V + A G   +  L S    ++   G
Sbjct: 119 GTVWAWGDNYSGQLGTGSTAVSAEPVQVQGL-SGVLSVASGFAHSAALRS--DGTVWAWG 175

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             +Y QLG               L   +   P  +  L G  ++ VA G N T+A+ + G
Sbjct: 176 DNRYRQLG--------------PLTAGSSSVPVQVPGLGG--VIAVAAGGNTTLALRADG 219

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG    G+LG     D  V  R +  Q   VL    V++  +  S C A       
Sbjct: 220 TVWAWGDNRSGQLG-----DGTVTTRGNPLQ---VLGLTGVVTLSAGASHCVA------- 264

Query: 309 WGKLKNNGDDWMYPKPLMDLSG---------------WNLRCMDSGNMHHF-VGADSSCI 352
              L++NG  W +    M   G                ++    +GN H   V +D +  
Sbjct: 265 ---LRSNGTAWTWGLNTMGQLGDGTTTQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVW 321

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +WG  +Y +LG G     SS +P +  +  G   I++  G+ HSL +
Sbjct: 322 AWGDNRYRQLGNG--NMTSSLLPIQAGLSGG---ITLVAGFKHSLTL 363



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 96/349 (27%), Positives = 145/349 (41%), Gaps = 38/349 (10%)

Query: 36  RKGALDGNLV--SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           R+G L   L   SPT ++     D   VA+G    H +A+  +G  + WG N  GQLG G
Sbjct: 78  RQGQLGNGLFTNSPTPVKVKNLTDAVAVASG--DSHSLALRSDGTVWAWGDNYSGQLGTG 135

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
                  P  V  LS   +    +G +H+  +  DG   A+G N++ QLG  +  +   P
Sbjct: 136 STAVSAEPVQVQGLS--GVLSVASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVP 193

Query: 154 SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
             V  L   V A A G + T+ L +    ++   G  + GQLG GT              
Sbjct: 194 VQVPGL-GGVIAVAAGGNTTLALRA--DGTVWAWGDNRSGQLGDGT-------------- 236

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
              +  P  +  L G  +V ++ G +H VA+ S G  +TWG    G+LG        VP 
Sbjct: 237 VTTRGNPLQVLGLTG--VVTLSAGASHCVALRSNGTAWTWGLNTMGQLGDGTTTQRSVPA 294

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGDDWMYPKPLMDLSGW 331
           +V        L       AG+ +S      G ++ WG  + +  G+  M    L   +G 
Sbjct: 295 QVG-------LTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQLGNGNMTSSLLPIQAGL 347

Query: 332 NLRCMDSGNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           +          H +   AD +  SWG   +G+LG G Y  + S  P +V
Sbjct: 348 SGGITLVAGFKHSLTLRADGTVWSWGDNVFGQLGDGTYQPRMS--PVRV 394



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 128/296 (43%), Gaps = 35/296 (11%)

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC 168
           +  + +   G+ H+V V  DG+  A+G+N+ GQLG+G   N   P  V+ L   V A A 
Sbjct: 49  RASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKVKNLTDAV-AVAS 107

Query: 169 GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
           G   ++ L S    ++   G    GQLG G+                    P  +  L+G
Sbjct: 108 GDSHSLALRS--DGTVWAWGDNYSGQLGTGST--------------AVSAEPVQVQGLSG 151

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
             ++ VA G  H+ A+ S G V+ WG   Y +LG        VP +V        L    
Sbjct: 152 --VLSVASGFAHSAALRSDGTVWAWGDNRYRQLGPLTAGSSSVPVQVP------GLGGVI 203

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYPK--PLMDLSGWNLRCMDSGNMHHF 344
            ++AG   +      G ++ WG  ++   GD  +  +  PL  L    +  + +G  H  
Sbjct: 204 AVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRGNPLQVLGLTGVVTLSAGASHCV 263

Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            + ++ +  +WG    G+LG G   Q+S  +P +V + +   V++   G  HSL +
Sbjct: 264 ALRSNGTAWTWGLNTMGQLGDGTTTQRS--VPAQVGLTD---VMAAVAGNYHSLAV 314



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 20/190 (10%)

Query: 218 PRPRAIAALAGE-TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           P  +  AALAG  ++ +++ G  H+V V S G V+ WGF   G+LG+    +   P +V 
Sbjct: 38  PVDQTRAALAGRASVARLSLGQYHSVGVHSDGSVWAWGFNRQGQLGNGLFTNSPTPVKV- 96

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMYPKP--LMDLSG 330
              +N  L     +++G  +S      G ++ WG   +     G   +  +P  +  LSG
Sbjct: 97  ---KN--LTDAVAVASGDSHSLALRSDGTVWAWGDNYSGQLGTGSTAVSAEPVQVQGLSG 151

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  + SG  H   + +D +  +WG  +Y +L  GP    SS++P +V  L G  VI+V
Sbjct: 152 --VLSVASGFAHSAALRSDGTVWAWGDNRYRQL--GPLTAGSSSVPVQVPGLGG--VIAV 205

Query: 390 ACGYGHSLVI 399
           A G   +L +
Sbjct: 206 AAGGNTTLAL 215


>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
            (Silurana) tropicalis]
          Length = 4842

 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 151/338 (44%), Gaps = 38/338 (11%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4024 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4080

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4081 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4140

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L    +   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4141 NGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSA-DGSLVWAFGDGDYGK 4199

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4200 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4245

Query: 255  ----FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                 G          + + VP  + +F  +        I+ G+ ++   +  G++Y WG
Sbjct: 4246 QDRLIGLPEGRARNHNRPQLVPVLLGIFIDD--------IAVGAEHTLALSASGEVYAWG 4297

Query: 311  KLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                      + +    P  +  L G N+R + +G  H
Sbjct: 4298 SNSEGQLGLGHTNHVREPTLVTALQGKNIRQISAGRCH 4335



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 133/282 (47%), Gaps = 43/282 (15%)

Query: 134  FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
            +G  +HGQL     RN + PS      S+     CG + T  + +    ++L  G   YG
Sbjct: 3983 WGAGRHGQLAEAG-RNVMIPSGAGSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 4038

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
            +LG G  ++ +                  I+AL G  + ++  +CG++ H++A+   G V
Sbjct: 4039 RLGQGNSDDLHVLT--------------VISALQGFVVTQLVTSCGSDGHSMALTESGEV 4084

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++WG G YG+LGH     +  PR+++  Q   V+     +S G  +S+     G+L+ +G
Sbjct: 4085 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTADGKLFTFG 4140

Query: 311  KLKNNGD----------DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQ 358
                NGD          +   P+ +  L G ++  +  G  H   V AD S + ++G   
Sbjct: 4141 ----NGDYGRLGLGNTSNKKLPERVTALEGLHIGQVACGLNHTLAVSADGSLVWAFGDGD 4196

Query: 359  YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            YG+LG G    KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4197 YGKLGLGNSTAKSS--PQKVDVLCGIGIKKVACGTQFSVALT 4236



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ + AL G    KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFTRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 24/204 (11%)

Query: 65  CVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           CVS    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   + +   G SH
Sbjct: 515 CVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--NVGEVSCGSSH 572

Query: 122 TVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-GADFTVWLSSV 179
           T+ +++DG ++ +FG   +G+LG G      +P  V  L    T   C G+  ++ L+S 
Sbjct: 573 TIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSSLALTST 632

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
                   G      LG G+                   RP+ I  LA   IV ++ G +
Sbjct: 633 GQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAATRIVDISIGDS 675

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGH 263
           H +A+     VY WG    G+ G 
Sbjct: 676 HCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           VV+E      +G N   QL  G+    ++P    C     T  A    +  ++ S +G S
Sbjct: 367 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPCFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK V+ L+GM    V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVVEALQGMFTRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  +  L+G+ I  +A G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4263 PQLVPVLLGIFIDDIAVGAE--HTLALSASGEVYAWGSNSEGQLGLGHTNHVREPTLVTA 4320

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4321 LQGKNIRQISAGRCHSAAWT 4340



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+  R V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFTRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|443704116|gb|ELU01328.1| hypothetical protein CAPTEDRAFT_228560 [Capitella teleta]
          Length = 1874

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 24/296 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVG-VDIRFVAAGCVSCHCVAVDV 75
            +  G +L CG   +  +G  +G  D +L S T +  L G V  + V +     H +A+  
Sbjct: 1037 QANGTVLACGEGSYGRLG--QGNSD-DLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTE 1093

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG  L FG
Sbjct: 1094 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFG 1153

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G++ N   P  V+ L +  +   ACG + TV +S+ +G++    G   YG+
Sbjct: 1154 NGDYGRLGLGTVCNRKTPERVKALENYHIGHVACGLNHTVCVSA-DGSTTWAFGDGDYGK 1212

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G  +  +T              P  I AL+G  + KVACGT  +VA+   G+V TWG
Sbjct: 1213 LGLGNTSAKST--------------PVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWG 1258

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                      + +    P++V     + +   E V+  GS ++      G ++ WG
Sbjct: 1259 QDRLIGQTEAQMRGHCTPQKVTTLAGHFI---EEVV-VGSEHTLALTSDGNVWGWG 1310



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 139/337 (41%), Gaps = 35/337 (10%)

Query: 80   YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
            Y WG    GQL       R   T +   S    ++   G++ T V+  +G  LA G   +
Sbjct: 994  YLWGGGRHGQLCEAG---RSVLTPLHTSSFSSAQQIICGQNCTFVIQANGTVLACGEGSY 1050

Query: 140  GQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            G+LG G+   + +    S ++  V     T+ G+D    L+  E   + + G   YG+LG
Sbjct: 1051 GRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHS-LALTESGEVFSWGDGDYGKLG 1109

Query: 197  HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            HG  +               Q RPR I AL GE ++++ACG  H+  V   G + T+G G
Sbjct: 1110 HGNSDR--------------QRRPRQIEALQGEEVIQIACGFKHSAVVTVDGKLLTFGNG 1155

Query: 257  GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM------WG 310
             YGRLG     +   P RV   +  ++      ++ G  ++ C +  G          +G
Sbjct: 1156 DYGRLGLGTVCNRKTPERVKALENYHI----GHVACGLNHTVCVSADGSTTWAFGDGDYG 1211

Query: 311  KL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
            KL   N      P  +  LSG  ++ +  G      +  D   ++WG  +   +G     
Sbjct: 1212 KLGLGNTSAKSTPVKIEALSGLKVKKVACGTQFSVALTRDGFVLTWGQDRL--IGQTEAQ 1269

Query: 369  QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +    P+KV  L G  +  V  G  H+L +    NV
Sbjct: 1270 MRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNV 1306



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 128/309 (41%), Gaps = 34/309 (11%)

Query: 73   VDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK---AGAGRSHTVVVTEDG 129
            +   G     G    G+LG G+       TIVS L  + + +   +     H++ +TE G
Sbjct: 1036 IQANGTVLACGEGSYGRLGQGNSDDLHSLTIVSALQGFVVTQLVTSVGSDGHSLALTESG 1095

Query: 130  NSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAG 188
               ++G   +G+LG G+   +  P  +  L   EV   ACG   +  + +V+G  +L  G
Sbjct: 1096 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQIACGFKHSA-VVTVDG-KLLTFG 1153

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               YG+LG GT     T              P  + AL    I  VACG NHTV V + G
Sbjct: 1154 NGDYGRLGLGTVCNRKT--------------PERVKALENYHIGHVACGLNHTVCVSADG 1199

Query: 249  YVYTWGF--GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
               TW F  G YG+LG      +  P +++      V      ++ G+  S      G +
Sbjct: 1200 ST-TWAFGDGDYGKLGLGNTSAKSTPVKIEALSGLKV----KKVACGTQFSVALTRDGFV 1254

Query: 307  YMWG--KLKNNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
              WG  +L    +  M     P+ +  L+G  +  +  G+ H   + +D +   WG    
Sbjct: 1255 LTWGQDRLIGQTEAQMRGHCTPQKVTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNAD 1314

Query: 360  GELGYGPYG 368
            G+LG G  G
Sbjct: 1315 GQLGLGHTG 1323



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 6/110 (5%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR--PTI 103
            +P ++  L G+ ++ VA G  +   VA+  +G   TWG++    +G  +   R    P  
Sbjct: 1223 TPVKIEALSGLKVKKVACG--TQFSVALTRDGFVLTWGQDRL--IGQTEAQMRGHCTPQK 1278

Query: 104  VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            V+ L+ + I++   G  HT+ +T DGN   +G N  GQLG G      EP
Sbjct: 1279 VTTLAGHFIEEVVVGSEHTLALTSDGNVWGWGLNADGQLGLGHTGTVREP 1328


>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
            harrisii]
          Length = 4865

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4047 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4103

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4104 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLFTFG 4163

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4164 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4222

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4223 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4268

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4269 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4324

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4325 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 4358



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3999 GKCDVYLWGAGRHGQLAEAG---RNVMIPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4055

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4056 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4114

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +++++CG  H+  V S G ++
Sbjct: 4115 YGKLGHGNSDR--------------QRRPRQIEALQGEEVIQMSCGFKHSAVVTSDGKLF 4160

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4161 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4186

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4187 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4230

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4231 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4259



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  V+E
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGVAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+  +  
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVSED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+++ 
Sbjct: 4286 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4343

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4344 LQGKNIRQISAGRCHSAAWT 4363



 Score = 45.1 bits (105), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
          Length = 3507

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 2689 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 2745

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 2746 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2805

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 2806 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 2864

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 2865 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 2910

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 2911 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 2966

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 2967 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 3000



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 2641 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 2697

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 2698 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 2756

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 2757 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 2802

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 2803 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 2828

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 2829 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 2872

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 2873 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 2901



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 2928 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 2985

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 2986 LQGKNIRQISAGRCHSAAWT 3005


>gi|46249868|gb|AAH68834.1| LOC398469 protein [Xenopus laevis]
          Length = 530

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 22/268 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H +  + +G  Y+WG N   QLG+G+ IQ   P  +
Sbjct: 63  IMPRRLDVLCGKKIVDLSYGS-GPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 121

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
             EL   K+ +   G  H++ +T DG   ++G+N  GQ+GSG+  N+  P  V   +   
Sbjct: 122 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSK 181

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +  A  T  ++  +   +   G    GQLG G     NT +         Q  P  +
Sbjct: 182 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  I++V  G  HT+A+  +G +Y WG   +G+LG   + ++ VP +V   +R   
Sbjct: 228 VFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 284

Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
                V +  S N S+  +  GQ+YMWG
Sbjct: 285 --MVEVTACHSTNISAAKSQSGQVYMWG 310



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G   +  +  T++     FG N    LG+G  ++ I P  +  L   ++   + G+   +
Sbjct: 28  GCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHI 87

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L + +G  + + G   Y QLG+G   +  T    V++  E          L  + +++V
Sbjct: 88  LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIQV 133

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++A+ S G V++WG+   G++G     ++ VPR+V    ++ V+     ISAG 
Sbjct: 134 ACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVV---VSISAGQ 190

Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            +S      G +Y WG        L N G+  M P  L+      +  +  G  H    +
Sbjct: 191 TSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPICIIQVVLGYAHTLALS 249

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           D   + +WG   +G+LG G   + +  +P KV   E M
Sbjct: 250 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 285



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 14/179 (7%)

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           C  N  +       V+ +G      LG  + +   +PRR+DV     ++  +    +G  
Sbjct: 29  CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIV--DLSYGSGPH 86

Query: 296 NSSCTAGGGQLYMWG----KLKNNGDDWMYPKPL---MDLSGWNLRCMDSGNMHHF-VGA 347
              C    G++Y WG        NG+      P+   M+L    +  +  G+ H   + +
Sbjct: 87  ILLCNE-DGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTS 145

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVIVDRTNV 405
           D    SWG+   G++G G    +S  +P+KV   L+   V+S++ G   S+ + D  +V
Sbjct: 146 DGEVFSWGYNNCGQVGSGTTANQS--VPRKVASSLQSKVVVSISAGQTSSMALTDNGHV 202


>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +++     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI- 96
           G+ +   + P  +  L    I  ++ G    HC+++  +   Y WG N  GQ G G+   
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIG--DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
              +P  VS L    I++  AG SH++  T
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWT 734


>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
 gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
          Length = 1050

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/280 (29%), Positives = 126/280 (45%), Gaps = 36/280 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
           L +G++  GQ G GS    I P P V   + +  V   ACG + +V+L  +E   +   G
Sbjct: 2   LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFL--LEDGEVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
           L   GQLGH ++                  +P  I ALAG+ IV VACG +H+VA+  +G
Sbjct: 60  LNTKGQLGHESEGS----------------KPEPIGALAGQHIVHVACGESHSVALSDQG 103

Query: 249 YVYTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V++WG G  G+LG    +D   VPR +    +  +L     IS G+ +    A  GQ +
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----ISCGNWHCLALAADGQFF 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG+       L         P+ +  L G  L  + +G  H F +    +   WG    
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG     ++    P  V +L    V+ ++CG  H+ V+
Sbjct: 220 GQLGLS--DERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG +  GQ G G  +Q     P +   +    +K+   G +H+V + EDG     G N  
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG  S  +  +P P+  L  + +   ACG   +V LS  +   + + G    GQLG  
Sbjct: 64  GQLGHESEGS--KPEPIGALAGQHIVHVACGESHSVALS--DQGQVFSWGAGSDGQLGLT 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           T               +A   PR I  L  +TI++++CG  H +A+ + G  +TWG   Y
Sbjct: 120 TIE-------------DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG  +E   +  P+RV          P A ++AG  +S   +  G ++ WGK      
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDG----IPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
             ++  D   P  +  L    +  +  G  H  V   S    ++G    G+LG+     +
Sbjct: 223 GLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P++V  L G  V  +ACG  H+L  V
Sbjct: 283 VN--PRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 140/315 (44%), Gaps = 35/315 (11%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
             C   H V +  +G  YT G N +GQLGH  + +  +P  +  L+   I     G SH+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPEPIGALAGQHIVHVACGESHS 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
           V +++ G   ++G    GQLG  +I + +  P  ++ L  + +   +CG     W  L+ 
Sbjct: 97  VALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN----WHCLAL 152

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                    G   YGQLG G +               +Q  P+ + +L G  + +VA G 
Sbjct: 153 AADGQFFTWGQNSYGQLGLGKEC-------------PSQASPQRVKSLDGIPLAQVAAGG 199

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H+ A+   G V+ WG    G+LG  +++D   P  V + +   V+     IS G  +++
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV----YISCGEEHTA 255

Query: 299 CTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
                G ++ +     G+L ++  +D + P+ +++L G  +  +  G  H   FV +   
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 351 CISWGHAQYGELGYG 365
             ++G    G+LG G
Sbjct: 316 IYAFGCGTRGQLGTG 330



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R++ L G+ +  VAAG    H  A+ + G  + WG+N  GQLG  D+  R+ P  V 
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 298 QIACGRHHTLAFVPSSGM-IYAFGCGTRGQLGTG 330



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 19/231 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P  +  L G  I  VA G    H VA+  +G+ ++WG    GQLG    +     P ++ 
Sbjct: 75  PEPIGALAGQHIVHVACG--ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVT 164
           +L++  I +   G  H + +  DG    +G N +GQLG G    ++  P  V+ L     
Sbjct: 133 KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A         +  S+ GA +   G    GQLG   + +  +              P  + 
Sbjct: 193 AQVAAGGAHSFALSLSGA-VFGWGKNSSGQLGLSDERDRES--------------PCHVK 237

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288


>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 1036

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAG 188
           L +G   +GQLG G I  EI   P +C       V    CG   TV+L  ++  ++   G
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFL--LDDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +++ +P  + AL  + IV V+CG +HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KSRKKPEHVVALDAQIIVAVSCGESHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V++WG G  G+LG    ++   VPR +       +    A ++ G  +S   + GGQ++
Sbjct: 104 QVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQI----AQVACGYWHSHALSKGGQVF 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG+       L  +G     P+ +  L G     + +G  H F +    +   WG  ++
Sbjct: 160 SWGQNQFGQLGLGMHGSSISTPQIIQSLQGIPFAQLSAGGAHSFAITLSGAVFGWGKNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG      K    P  +  L    VI V+CG  H+
Sbjct: 220 GQLGLN--DTKDRWFPALLKSLRSQRVIFVSCGEDHT 254



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 19/228 (8%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R    GC   H V +  +G  YT G N+ GQLGH     R +P  V  L    I     G
Sbjct: 35  RVCDVGCGLKHTVFLLDDGTVYTCGCNDLGQLGHEKS--RKKPEHVVALDAQIIVAVSCG 92

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWL 176
            SHT+ + + G   ++G   +GQLG  +    +  P  ++CL   ++   ACG   +  L
Sbjct: 93  ESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRNIKCLSDVQIAQVACGYWHSHAL 152

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           S  +G  + + G  Q+GQLG G         SS+         P+ I +L G    +++ 
Sbjct: 153 S--KGGQVFSWGQNQFGQLGLGMHG------SSIS-------TPQIIQSLQGIPFAQLSA 197

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           G  H+ A+   G V+ WG   +G+LG  + KD W P  +   +   V+
Sbjct: 198 GGAHSFAITLSGAVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVI 245



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIRF-VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ ++WG    GQLG  +  +  R P  
Sbjct: 71  SRKKPEHVVALDAQIIVAVSCGESHTLALNDKGQVFSWGLGSNGQLGLNNFEECVRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCL--V 160
           +  LS  +I +   G  H+  +++ G   ++G N+ GQLG G   + I  P  ++ L  +
Sbjct: 131 IKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSISTPQIIQSLQGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                +A GA  F + LS     ++   G  ++GQLG       +TKD            
Sbjct: 191 PFAQLSAGGAHSFAITLS----GAVFGWGKNKFGQLGLN-----DTKDRWF--------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + ++ V+CG +HT A+     V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHEINPRKV 288



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 136/322 (42%), Gaps = 34/322 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         ++   G G  HTV + +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEHVVALDAQIIVAVSCGESHTLALN--DKGQVFSWGLGSNGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N  +  V++       PR I  L+   I +VACG  H+ A+   G V++WG   +
Sbjct: 118 ----LNNFEECVRV-------PRNIKCLSDVQIAQVACGYWHSHALSKGGQVFSWGQNQF 166

Query: 259 GRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG          P+ +   Q      P A +SAG  +S      G ++ WGK K    
Sbjct: 167 GQLGLGMHGSSISTPQIIQSLQG----IPFAQLSAGGAHSFAITLSGAVFGWGKNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+  D  +P  L  L    +  +  G  H   +       ++G   YG+LG+     +
Sbjct: 223 GLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAGGYGQLGHNCTNHE 282

Query: 371 SSAMPKKVDILEGMHVISVACG 392
            +  P+KV  L G  V  ++CG
Sbjct: 283 IN--PRKVFELMGNVVTQISCG 302



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 7/160 (4%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGG++   G   +  +G   G    ++ +P  ++ L G+    ++AG    H  A+ + G
Sbjct: 154 KGGQVFSWGQNQFGQLGL--GMHGSSISTPQIIQSLQGIPFAQLSAG--GAHSFAITLSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WG+N+ GQLG  D   R  P ++  L   ++     G  HT  +T+      FG  
Sbjct: 210 AVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQRVIFVSCGEDHTAALTKLRGVFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWL 176
            +GQLG     +EI P  V  L+ + VT  +CG+  T WL
Sbjct: 270 GYGQLGHNCTNHEINPRKVFELMGNVVTQISCGS--TRWL 307



 Score = 42.0 bits (97), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 28/50 (56%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P+K +   G  V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVCDVGCGLKHTVFLLD 51


>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Pongo abelii]
          Length = 4864

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4046 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4102

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4103 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4162

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4163 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4221

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ I  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4222 LGLGNST--------------AKSSPQKIDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4267

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ +     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4268 QDRLIGLPEGRARNHNRPQQIPLLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4323

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4324 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4357



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3998 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4054

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4055 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4113

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4114 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4159

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4160 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4185

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4186 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4229

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+K+D+L G+ +  VACG   S+ + 
Sbjct: 4230 KSS--PQKIDVLCGIGIKKVACGTQFSVALT 4258



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4285 PQQIPLLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4342

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4343 LQGKNVRQISAGRCHSAAWT 4362



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
            norvegicus]
          Length = 4859

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +++     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI- 96
           G+ +   + P  +  L    I  ++ G    HC+++  +   Y WG N  GQ G G+   
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIG--DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
              +P  VS L    I++  AG SH++  T
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWT 734


>gi|91201899|emb|CAJ74959.1| similar to chromosomal condensation regulatory protein [Candidatus
           Kuenenia stuttgartiensis]
          Length = 620

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 41/364 (11%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           P  GV    ++ G    H +A+D EG+ + WG NE GQLG G    +  P  V   +   
Sbjct: 151 PTPGVVTPQISGGW--SHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTTPVAVQINALTT 208

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR--NEIEPSPVRCLVSEVTATACG 169
           I     G  H++ +   G   A+G+N  G+LG G+    + +        ++++ A + G
Sbjct: 209 ITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAG 268

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
            ++++ LSS    S+L  G    GQLG+G     NT  +SV     + P  + I+A    
Sbjct: 269 GEYSIALSS--DGSVLTWGANSDGQLGNG-----NTDQNSVPTKISSLPLMKGISA---- 317

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVPRRVDVFQRNNVLPPEA 288
                  G  H++AV   G+VY WG    G++G+ E+  D  V   V V    ++     
Sbjct: 318 -------GEAHSLAVTEDGFVYAWGLNDEGQIGNGEKSADNPVLNPVQVQGLTDI----D 366

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGWNLRCMDSGNM 341
            + AG+  S      G+++ WG L + G        +   P  + +L+   +  +  G+ 
Sbjct: 367 AVCAGATFSLALGIDGRVWAWG-LNDEGQLGDGTNTNSTTPVEVTNLA--KISAVACGSD 423

Query: 342 HHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           H     +    SWG    G+LG G    +SS+ P  +D+     ++ VA G  HSL I  
Sbjct: 424 HSLAIRNGKVKSWGLNDEGQLGDG--STRSSSAP--LDVTGLSDIVYVAAGESHSLAITS 479

Query: 402 RTNV 405
           + N+
Sbjct: 480 KGNI 483



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 122/243 (50%), Gaps = 28/243 (11%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            G  D N V PT++  L    ++ ++AG    H +AV  +G  Y WG N+ GQ+G+G+K 
Sbjct: 294 NGNTDQNSV-PTKISSLP--LMKGISAG--EAHSLAVTEDGFVYAWGLNDEGQIGNGEK- 347

Query: 97  QRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
             D P +  V       I    AG + ++ +  DG   A+G N  GQLG G+  N   P 
Sbjct: 348 SADNPVLNPVQVQGLTDIDAVCAGATFSLALGIDGRVWAWGLNDEGQLGDGTNTNSTTPV 407

Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            V  L ++++A ACG+D ++   ++    + + GL   GQLG G+     T+ SS     
Sbjct: 408 EVTNL-AKISAVACGSDHSL---AIRNGKVKSWGLNDEGQLGDGS-----TRSSSA---- 454

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
                P  +  L+   IV VA G +H++A+ SKG +Y WG  G G+LG    +    P+ 
Sbjct: 455 -----PLDVTGLS--DIVYVAAGESHSLAITSKGNIYVWGLNGDGQLGDGTNRSSRTPKT 507

Query: 275 VDV 277
           +D+
Sbjct: 508 IDL 510



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 128/314 (40%), Gaps = 87/314 (27%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERG------------------------------- 88
             A  C   H +A+D  GR + WG N  G                               
Sbjct: 209 ITAVDCGGDHSMALDSLGRVWAWGYNGDGELGGGTTENNSNVPVPVPVPNLTDIIAISAG 268

Query: 89  ----------------------QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
                                 QLG+G+  Q   PT +S L    +K   AG +H++ VT
Sbjct: 269 GEYSIALSSDGSVLTWGANSDGQLGNGNTDQNSVPTKISSLP--LMKGISAGEAHSLAVT 326

Query: 127 EDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGAS 183
           EDG   A+G N  GQ+G+G  S  N +  +PV+   ++++ A   GA F++ L  ++G  
Sbjct: 327 EDGFVYAWGLNDEGQIGNGEKSADNPVL-NPVQVQGLTDIDAVCAGATFSLAL-GIDG-R 383

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   GL   GQLG GT+    T      LA                 I  VACG++H++A
Sbjct: 384 VWAWGLNDEGQLGDGTNTNSTTPVEVTNLAK----------------ISAVACGSDHSLA 427

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           +   G V +WG    G+LG    +    P  +DV   ++++     ++AG  +S      
Sbjct: 428 I-RNGKVKSWGLNDEGQLGDGSTRSSSAP--LDVTGLSDIV----YVAAGESHSLAITSK 480

Query: 304 GQLYMWGKLKNNGD 317
           G +Y+WG    NGD
Sbjct: 481 GNIYVWGL---NGD 491



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 82/205 (40%), Gaps = 36/205 (17%)

Query: 218 PRPRAI------AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
           PRPR        A   G    +++ G +H++A+DS+G ++ WG    G+LG      +  
Sbjct: 138 PRPRPTGTQPQPAPTPGVVTPQISGGWSHSLALDSEGKLWAWGLNEDGQLGDGTNDSQTT 197

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM----------- 320
           P  V +    N L     +  G  +S      G+++ WG    NGD  +           
Sbjct: 198 PVAVQI----NALTTITAVDCGGDHSMALDSLGRVWAWGY---NGDGELGGGTTENNSNV 250

Query: 321 ----YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
                   L D+    +     G     + +D S ++WG    G+LG G   Q S  +P 
Sbjct: 251 PVPVPVPNLTDI----IAISAGGEYSIALSSDGSVLTWGANSDGQLGNGNTDQNS--VPT 304

Query: 377 KVDILEGMHVISVACGYGHSLVIVD 401
           K+  L  M  IS   G  HSL + +
Sbjct: 305 KISSLPLMKGIS--AGEAHSLAVTE 327


>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Cricetulus griseus]
          Length = 4859

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +++     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI- 96
           G+ +   + P  +  L    I  ++ G    HC+++  +   Y WG N  GQ G G+   
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIG--DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
              +P  VS L    I++  AG SH++  T
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWT 734


>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 isoform 1 [Canis lupus familiaris]
          Length = 4861

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4354



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4255



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 136/325 (41%), Gaps = 37/325 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ + AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA--GGGQ 305
           G VY WG G     G  E      P+ ++      ++     IS G  +S C A     +
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIG--DSXCLALRHDNE 685

Query: 306 LYMWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISW 354
           +Y WG          N+      PK +  L G  ++ + +G  H      +  D   ++W
Sbjct: 686 VYAWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAW 745

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVD 379
                 +L    +    S + +  D
Sbjct: 746 HRPYCVDLEESTFSHLRSFLERYCD 770



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 149/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +   LS    +   AG+  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKMA--LSFSDAQTIEAGQYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ V          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+     +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  V  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +  +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSXCLALRHDNEVYAWGNNSMGQCGQ 699



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK V+ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4340 LQGKNIRQISAGRCHSAAWT 4359


>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
 gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
          Length = 892

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 155/376 (41%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG      +P ++  
Sbjct: 101 PKPLEFAVRLDVQNIS--CGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDA 158

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           LS   I+    G  HT  VT  G+   +  G  K G LG G+  +   P  V   +    
Sbjct: 159 LSHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPLEGIH 218

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V++ +CG   T  ++S     +   G   +G LGHG                E+   PR 
Sbjct: 219 VSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGD--------------RESISVPRE 262

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH +++ + 
Sbjct: 263 VESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKL 322

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    ++ G   +      G +Y     ++G+L N   D M P  +
Sbjct: 323 VPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNTQADGMLPVRV 378

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G    K++  P  V+ L+ 
Sbjct: 379 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDKNT--PTLVEALKD 436

Query: 384 MHVISVACGYGHSLVI 399
             V SV CG   +  I
Sbjct: 437 KQVRSVVCGINFTAAI 452



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+P   A      +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D 
Sbjct: 101 PKPLEFAVRL--DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLIDA 158

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
               N+     +++ G  ++      G LY WG       L  +G+D   W+       L
Sbjct: 159 LSHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNGPL 214

Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G ++  +  G  H   V +     ++G   +G LG+G   ++S ++P++V+ L+G+  +
Sbjct: 215 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRESISVPREVESLKGLRTV 272

Query: 388 SVACGYGHSLVIVD 401
             ACG  H+  +V+
Sbjct: 273 RAACGVWHTAAVVE 286


>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus cuniculus]
          Length = 4860

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4217

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P++V V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4319

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4320 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4353



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4225

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4281 PQQVPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4338

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4339 LQGKNIRQISAGRCHSAAWT 4358



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|90657596|gb|ABD96895.1| hypothetical protein [Cleome spinosa]
          Length = 477

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 118/402 (29%), Positives = 163/402 (40%), Gaps = 69/402 (17%)

Query: 47  PTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           P +L P +     G + R++   C   H  AV  +G  +TWG NE GQLG G ++ R RP
Sbjct: 45  PKQLPPDLFGCPSGANSRWLDIACGREHTSAVASDGSLFTWGANEYGQLGDGTEVGRKRP 104

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSGSIRNEIEPSPV 156
             V  L    +K    G   T  + E    DG  S++  W      GS   R      P 
Sbjct: 105 KKVKHLQSEFVKSVSCGAFCTAAIAEPRENDGTLSMSRLWVWGQNQGSNLPRLFSGAFPA 164

Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
              + +V+   CG    V LS  EG  +L A G  ++GQLG G  +             E
Sbjct: 165 ETAIRQVS---CGTAHVVALSE-EG--LLQAWGYNEHGQLGRGVTS-------------E 205

Query: 216 AQPRPRAIAALAG--------ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
               PR IAA A           I +++CG  HT AV  KG VYTWG G  G+LGH   +
Sbjct: 206 GLQAPRLIAAYAKFLDEAPELVKIAQISCGEYHTAAVSEKGEVYTWGLGSMGQLGHISLQ 265

Query: 268 ---DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN---------- 314
               E +PRRV       V      +S G V++   +  G LY WG  +           
Sbjct: 266 VGDKELIPRRVAGLDSLCV----KEVSCGGVHTCALSSDGALYAWGGGQAGQLGLGPQSG 321

Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPY 367
                  G + +       +   +++ +  G+ H  V   D     WG+  YG+      
Sbjct: 322 FFSCILGGTEMLLRNVPALVIPIDVQLVACGHSHTLVYMKDGRIRGWGYNSYGQAA---- 377

Query: 368 GQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
             KSS    P  VD   G  V  +A G GHS V+ D  ++ E
Sbjct: 378 NDKSSYAWFPSPVDWCVG-QVRKLAAGGGHSAVLTDAFSLKE 418



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 154/362 (42%), Gaps = 47/362 (12%)

Query: 71  VAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSEL------SKYKIKKAGAGRSHT 122
           V +  +   Y WG N+ GQ G    +K+ R    +  +L      +  +      GR HT
Sbjct: 14  VTLPTKSAIYVWGYNQSGQTGRNGKEKLLRIPKQLPPDLFGCPSGANSRWLDIACGREHT 73

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEG 181
             V  DG+   +G N++GQLG G+      P  V+ L SE V + +CGA  T  ++    
Sbjct: 74  SAVASDGSLFTWGANEYGQLGDGTEVGRKRPKKVKHLQSEFVKSVSCGAFCTAAIAEPRE 133

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
               N G     +L     N+ +             PR  + A  A   I +V+CGT H 
Sbjct: 134 ----NDGTLSMSRLWVWGQNQGSNL-----------PRLFSGAFPAETAIRQVSCGTAHV 178

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAV----ISAGSVN 296
           VA+  +G +  WG+  +G+LG     +    PR +  + +     PE V    IS G  +
Sbjct: 179 VALSEEGLLQAWGYNEHGQLGRGVTSEGLQAPRLIAAYAKFLDEAPELVKIAQISCGEYH 238

Query: 297 SSCTAGGGQLYMWGKLK---------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVG 346
           ++  +  G++Y WG              GD  + P+ +  L    ++ +  G +H   + 
Sbjct: 239 TAAVSEKGEVYTWGLGSMGQLGHISLQVGDKELIPRRVAGLDSLCVKEVSCGGVHTCALS 298

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE--------GMHVISVACGYGHSLV 398
           +D +  +WG  Q G+LG GP     S +    ++L          + V  VACG+ H+LV
Sbjct: 299 SDGALYAWGGGQAGQLGLGPQSGFFSCILGGTEMLLRNVPALVIPIDVQLVACGHSHTLV 358

Query: 399 IV 400
            +
Sbjct: 359 YM 360



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 51/236 (21%), Positives = 100/236 (42%), Gaps = 31/236 (13%)

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G  Q GQ G       N K+  +++  +  P      + A    + +ACG  HT AV S 
Sbjct: 26  GYNQSGQTGR------NGKEKLLRIPKQLPPDLFGCPSGANSRWLDIACGREHTSAVASD 79

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC-------- 299
           G ++TWG   YG+LG   +     P++V   Q   V      +S G+  ++         
Sbjct: 80  GSLFTWGANEYGQLGDGTEVGRKRPKKVKHLQSEFV----KSVSCGAFCTAAIAEPREND 135

Query: 300 -TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
            T    +L++WG+ + +    ++       +   +R +  G  H    ++   + +WG+ 
Sbjct: 136 GTLSMSRLWVWGQNQGSNLPRLFSGAFPAETA--IRQVSCGTAHVVALSEEGLLQAWGYN 193

Query: 358 QYGELGYGPYGQKSSAMPKKV--------DILEGMHVISVACGYGHSLVIVDRTNV 405
           ++G+LG G   +   A P+ +        +  E + +  ++CG  H+  + ++  V
Sbjct: 194 EHGQLGRGVTSEGLQA-PRLIAAYAKFLDEAPELVKIAQISCGEYHTAAVSEKGEV 248


>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
            boliviensis boliviensis]
          Length = 4860

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 153/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4042 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4098

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4099 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4158

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4159 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSVVWAFGDGDYGK 4217

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4218 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4263

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     V+  +  ++ G+ ++   A  G +Y WG    
Sbjct: 4264 QDRLIGLPEGRARNHNRPQQIPVLA--GVIIED--VAVGAEHTLALASNGDVYAWGSNSE 4319

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4320 GQLGLGHTNHVREPTLVTGLQGKNVRQISAGRCH 4353



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3994 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4050

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4051 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4109

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4110 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4155

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4156 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4181

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4182 ----------------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTA 4225

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4226 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4254



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV V+ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4281 PQQIPVLAGVIIEDVAVGAE--HTLALASNGDVYAWGSNSEGQLGLGHTNHVREPTLVTG 4338

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4339 LQGKNVRQISAGRCHSAAWT 4358



 Score = 45.4 bits (106), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDVSIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 962

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 154/369 (41%), Gaps = 42/369 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+  V +D + ++  C + + V V  +G+ Y+WG    G+LGHG       P ++ E
Sbjct: 295 PKVLKSHVALDAQSIS--CGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDE 352

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--- 161
                ++ A  G  HT  VT  G+  A+G   H  G LG GS  +  +  PVR L     
Sbjct: 353 FDGSTVELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWK--PVRILGQMEG 410

Query: 162 -EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             V   +CG   T +++S     +   G   +G LGHG     N               P
Sbjct: 411 INVRTISCGPWHTAFVTS--AGKLFTFGDGTFGALGHGDRISTNI--------------P 454

Query: 221 RAIAALAGETIVKVACGTNHTVAV-------DSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
           R + AL G   ++ ACG  H+ AV        S G ++TWG G  G+LGH +     +P 
Sbjct: 455 REVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPL 514

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY-PKPLMDLSGWN 332
            V      +       ++ G   +   +  GQ+Y  G    + DD +  P  +    G +
Sbjct: 515 SVTELDTTSF----QQVACGQSITVALSMSGQVYAMGTADPSQDDVVRAPSCIEGGLGKS 570

Query: 333 LRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
                +   HH   + + +   +WG    G+LG+G    +   MP  V  L+G  V  V 
Sbjct: 571 FVQEVACGYHHIAVLNSKAEVYTWGKGSNGQLGHGDTEYRR--MPTLVKALKGKQVRKVV 628

Query: 391 CGYGHSLVI 399
           CG  ++  I
Sbjct: 629 CGSNYTATI 637



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 85/191 (44%), Gaps = 16/191 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +        ++CGTN+ V V  +G +Y+WG    GRLGH        P+ +D F 
Sbjct: 295 PKVLKSHVALDAQSISCGTNYAVLVTKQGQLYSWGEESGGRLGHGVCSYVPHPKLIDEFD 354

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            + V     +   G  ++      G LY WG   +N            W   + L  + G
Sbjct: 355 GSTV----ELADCGEFHTCAVTTSGDLYAWGDGDHNAGLLGLGSGASHWKPVRILGQMEG 410

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            N+R +  G  H  FV +     ++G   +G LG+G   + S+ +P++V+ L G   I  
Sbjct: 411 INVRTISCGPWHTAFVTSAGKLFTFGDGTFGALGHG--DRISTNIPREVEALNGCRTIRT 468

Query: 390 ACGYGHSLVIV 400
           ACG  HS  +V
Sbjct: 469 ACGVWHSAAVV 479


>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
          Length = 4870

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4052 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4108

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4109 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4168

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4227

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4228 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4274 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4329

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4330 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4363



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 4004 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4060

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4119

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4120 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4165

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4191

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4192 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4235

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4236 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4264



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +++     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4291 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4349 LQGKNIRQISAGRCHSAAWT 4368



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI- 96
           G+ +   + P  +  L    I  ++ G    HC+++  +   Y WG N  GQ G G+   
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIG--DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
              +P  VS L    I++  AG SH++  T
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWT 734


>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
          Length = 923

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 111/217 (51%), Gaps = 11/217 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G +  +  +P  +  L GV +  ++AG    H +A+ V G
Sbjct: 53  KGGELFAWGQNLHGQLGV--GKIFDSTTAPQIVEHLSGVPLAQISAG--KSHSMALSVSG 108

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G    +D P+++  L   K++    G SHT ++T+DG    FG  
Sbjct: 109 NIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLTKDGLVFTFGAG 168

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  L  + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 169 KYGQLGHNSTQNELRPCLVTKLAGNRVTQVACGRQHTLAYVSDLG-KVFSFGSGEEGQLG 227

Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
           + GT N+         S+ +L +E +   + +  +AG
Sbjct: 228 NGGTHNQLIPLPMKLPSNEELKFENRTSEKELIIIAG 264



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 25/259 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P IV  LS   + +  AG+
Sbjct: 39  IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLAQISAGK 98

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           SH++ ++  GN  ++G N  GQLG G   ++  PS +  L ++ V   ACG   T  L+ 
Sbjct: 99  SHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVEFLACGGSHTALLT- 157

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +   +   G  +YGQLGH  T NE                RP  +  LAG  + +VACG
Sbjct: 158 -KDGLVFTFGAGKYGQLGHNSTQNEL---------------RPCLVTKLAGNRVTQVACG 201

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             HT+A V   G V+++G G  G+LG+    ++ +P  + +   N  L  E   S   + 
Sbjct: 202 RQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIPLPMKL-PSNEELKFENRTSEKEL- 259

Query: 297 SSCTAGGGQ-LYMWGKLKN 314
               AGG Q + +W K +N
Sbjct: 260 -IIIAGGNQSILLWIKKEN 277



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 79/177 (44%), Gaps = 14/177 (7%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N HGQLG G I +      +   +S V   
Sbjct: 33  LQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQIVEHLSGVPLA 92

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A  +  ++     +I + G   +GQLG G     +T D            P  I AL
Sbjct: 93  QISAGKSHSMALSVSGNIYSWGRNDFGQLGLG-----HTDDKDF---------PSLIEAL 138

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             + +  +ACG +HT  +   G V+T+G G YG+LGH   ++E  P  V     N V
Sbjct: 139 ENQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGNRV 195



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 12/187 (6%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           R    L  + I+++ CG  H++A+   G ++ WG   +G+LG  +  D     ++ V   
Sbjct: 28  RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFDSTTAPQI-VEHL 86

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLR 334
           + V  P A ISAG  +S   +  G +Y WG+         + DD  +P  +  L    + 
Sbjct: 87  SGV--PLAQISAGKSHSMALSVSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEALENQKVE 144

Query: 335 CMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            +  G  H   +  D    ++G  +YG+LG+     ++   P  V  L G  V  VACG 
Sbjct: 145 FLACGGSHTALLTKDGLVFTFGAGKYGQLGHN--STQNELRPCLVTKLAGNRVTQVACGR 202

Query: 394 GHSLVIV 400
            H+L  V
Sbjct: 203 QHTLAYV 209


>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
          Length = 4859

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4352



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +++     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLSLSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4338 LQGKNIRQISAGRCHSAAWT 4357



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI- 96
           G+ +   + P  +  L    I  ++ G    HC+++  +   Y WG N  GQ G G+   
Sbjct: 647 GSSEATALRPKLIEELAATRIVDISIG--DSHCLSLSHDNEVYAWGNNSMGQCGQGNSTG 704

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
              +P  VS L    I++  AG SH++  T
Sbjct: 705 PITKPKKVSGLDGIAIQQISAGTSHSLAWT 734


>gi|255539128|ref|XP_002510629.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
 gi|223551330|gb|EEF52816.1| guanine nucleotide exchange factor P532, putative [Ricinus
           communis]
          Length = 450

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 116/263 (44%), Gaps = 30/263 (11%)

Query: 63  AGCVS---CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           A CV+    H VA+   G+ +TWG    G LGH    +   P +V  +S  KI+      
Sbjct: 158 AKCVALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKIRHIATSG 217

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACGADF 172
           +HT  +TE G    +G ++                     PS V+ L   V A  CG  F
Sbjct: 218 THTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGFF 277

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           T  L+  E   I N G     +LG G                  QP+P  I  L G  ++
Sbjct: 278 TAVLT--EEGQIWNWGANSNYELGRGNKTG------------GWQPKP--IPNLEGVRVI 321

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
           ++A G  H++A+  +G V +WGFGG+G+LGH   +++ +P  +D      V+     I+ 
Sbjct: 322 QIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALADQRVV----YIAC 377

Query: 293 GSVNSSCTAGGGQLYMWGKLKNN 315
           G   S+     G+LYMWG  K++
Sbjct: 378 GGSTSAAITDEGKLYMWGNAKDS 400



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/185 (28%), Positives = 79/185 (42%), Gaps = 19/185 (10%)

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VA G  H+VA+ S G V+TWG+GG+G LGH     E +PR V       +     + ++G
Sbjct: 161 VALGGVHSVALTSLGQVFTWGYGGFGALGHCVYHRELLPRLVQGISNEKI---RHIATSG 217

Query: 294 SVNSSCTAGGGQLYMWGK-------------LKNNGDDWMYPKPLMDLSGWNLRCMDSGN 340
           +  ++ T  G ++Y WG+               N G     P  +  L+         G 
Sbjct: 218 THTAAITETG-EVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVPVAAVFCGGF 276

Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               +  +    +WG     ELG G   +     PK +  LEG+ VI +A G  HSL + 
Sbjct: 277 FTAVLTEEGQIWNWGANSNYELGRG--NKTGGWQPKPIPNLEGVRVIQIASGGYHSLALT 334

Query: 401 DRTNV 405
           D   V
Sbjct: 335 DEGKV 339



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 31/213 (14%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           G L  P++++ L    +   A  C       +  EG+ + WG N   +LG G+K    +P
Sbjct: 253 GGLSIPSKVKALT---VPVAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQP 309

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
             +  L   ++ +  +G  H++ +T++G  L++G+  HGQLG  SI+N+  P  +  L  
Sbjct: 310 KPIPNLEGVRVIQIASGGYHSLALTDEGKVLSWGFGGHGQLGHPSIQNQKIPMVIDALAD 369

Query: 162 E-VTATACGADFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSVKLA--YEAQ 217
           + V   ACG   +        A+I + G L  +G          N KDS + +    E Q
Sbjct: 370 QRVVYIACGGSTS--------AAITDEGKLYMWG----------NAKDSQLGVPGLPEVQ 411

Query: 218 PRPRAIA------ALAGETIVKVACGTNHTVAV 244
           P P  +        L    ++ VA G +H + +
Sbjct: 412 PCPVEVVFLMEDDGLGPHKVLSVAVGASHAMCL 444



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 28/252 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP----TIVSELSKYKIK 113
           IR +A      H  A+   G  YTWGR+E          +        +I S++    + 
Sbjct: 210 IRHIATS--GTHTAAITETGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPSKVKALTVP 267

Query: 114 KAGA--GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGA 170
            A    G   T V+TE+G    +G N + +LG G+     +P P+  L    V   A G 
Sbjct: 268 VAAVFCGGFFTAVLTEEGQIWNWGANSNYELGRGNKTGGWQPKPIPNLEGVRVIQIASGG 327

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ L+  +   +L+ G   +GQLGH +               + Q  P  I ALA + 
Sbjct: 328 YHSLALT--DEGKVLSWGFGGHGQLGHPS--------------IQNQKIPMVIDALADQR 371

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAV 289
           +V +ACG + + A+  +G +Y WG     +LG     + +  P  V     ++ L P  V
Sbjct: 372 VVYIACGGSTSAAITDEGKLYMWGNAKDSQLGVPGLPEVQPCPVEVVFLMEDDGLGPHKV 431

Query: 290 IS--AGSVNSSC 299
           +S   G+ ++ C
Sbjct: 432 LSVAVGASHAMC 443


>gi|327260067|ref|XP_003214857.1| PREDICTED: secretion-regulating guanine nucleotide exchange
           factor-like [Anolis carolinensis]
          Length = 409

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 147/352 (41%), Gaps = 50/352 (14%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSEL--SKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           +TWG N  GQLG G +     P ++     ++  +K    G  H+ V+T+ G     G N
Sbjct: 13  FTWGANSYGQLGLGHREDVFLPQVLKGFLCNRETVKNITGGGGHSAVLTDTGELFLCGQN 72

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG G   +         L    V   ACG DFT+ L+      + + G   +GQLG
Sbjct: 73  KNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAG--SGQVFSCGSNSFGQLG 130

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
               +E +T               + I +L  E +V VA G  H +AV   G V+ WG  
Sbjct: 131 ISQTSEGSTVS-------------KRIESLQ-EKVVNVAAGLRHALAVTENGSVFQWGI- 175

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKL 312
           G      R  + E VP  +   Q   V   E     ++++GS +++     G+LY+WG  
Sbjct: 176 GMSSQAKRACQGEMVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDEGELYVWGNN 235

Query: 313 KN----NGDDWMYPKPLMD---LSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELG- 363
           K+    N DD++     +D     G  +R + +G  H     +     +WG A YG+LG 
Sbjct: 236 KHKQLVNKDDFVLKPQKIDAHYFGGEKVRRVWNGWTHMVAQTEMGKVFTWGRADYGQLGR 295

Query: 364 ----YGPYGQKSSA-----------MPKKVDILEGMHVISVACGYGHSLVIV 400
               Y   GQ   A            P  V  L G     +ACG  H+L IV
Sbjct: 296 SGLPYEQMGQDGKASDENSVKEPLHSPALVPALTGAS--QIACGSEHNLAIV 345



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 79/360 (21%), Positives = 139/360 (38%), Gaps = 49/360 (13%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H   +   G  +  G+N+ GQLG G         + S L    + +   G   T+++   
Sbjct: 56  HSAVLTDTGELFLCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGS 115

Query: 129 GNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           G   + G N  GQLG S +         +  L  +V   A G      L+  E  S+   
Sbjct: 116 GQVFSCGSNSFGQLGISQTSEGSTVSKRIESLQEKVVNVAAGLRHA--LAVTENGSVFQW 173

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G+    Q       E       +  ++    +P  +  L    +  VA G++H  A+  +
Sbjct: 174 GIGMSSQAKRACQGE-------MVPSFLRARQPCKVTGLEDARVKIVASGSSHATALTDE 226

Query: 248 GYVYTWGFGGYGRLGHREQKDEWV--PRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGG 303
           G +Y WG   + +L     KD++V  P+++D     +    E V  +  G  +       
Sbjct: 227 GELYVWGNNKHKQL---VNKDDFVLKPQKIDA----HYFGGEKVRRVWNGWTHMVAQTEM 279

Query: 304 GQLYMWGK-----LKNNG-------------DDWMYPKPLMD------LSGWNLRCMDSG 339
           G+++ WG+     L  +G             D+    +PL        L+G +   +  G
Sbjct: 280 GKVFTWGRADYGQLGRSGLPYEQMGQDGKASDENSVKEPLHSPALVPALTGASQ--IACG 337

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           + H+       C SWG  ++G  G G   + +   P+ +D+L    ++ V CG GHS+  
Sbjct: 338 SEHNLAIVGGQCFSWGWNEHGMCGNGT--EANVCAPQPLDVLSSAKLLYVGCGAGHSMAF 395



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/165 (24%), Positives = 80/165 (48%), Gaps = 15/165 (9%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLY 307
           ++TWG   YG+LG   ++D ++P+ +  F  N     E V  I+ G  +S+     G+L+
Sbjct: 12  LFTWGANSYGQLGLGHREDVFLPQVLKGFLCNR----ETVKNITGGGGHSAVLTDTGELF 67

Query: 308 MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWGHAQYG 360
           + G+ KN      + +D  + K    L G ++  +  G +    +       S G   +G
Sbjct: 68  LCGQNKNGQLGLGHTEDVTHFKLCSSLCGCSVIQVACGWDFTIILAGSGQVFSCGSNSFG 127

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +LG     + S+ + K+++ L+   V++VA G  H+L + +  +V
Sbjct: 128 QLGISQTSEGST-VSKRIESLQ-EKVVNVAAGLRHALAVTENGSV 170



 Score = 39.3 bits (90), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 46/101 (45%), Gaps = 10/101 (9%)

Query: 30  WDAVGRRKGALDGNLV-----SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGR 84
           ++ +G+   A D N V     SP  +  L G         C S H +A+ V G+C++WG 
Sbjct: 300 YEQMGQDGKASDENSVKEPLHSPALVPALTGAS----QIACGSEHNLAI-VGGQCFSWGW 354

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
           NE G  G+G +     P  +  LS  K+   G G  H++  
Sbjct: 355 NEHGMCGNGTEANVCAPQPLDVLSSAKLLYVGCGAGHSMAF 395


>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4846

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4028 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4084

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4085 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4144

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4145 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSVVWAFGDGDYGK 4203

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4204 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4249

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4250 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4305

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4306 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4339



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3980 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4036

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4095

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4096 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4141

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4142 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4167

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4168 ----------------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTA 4211

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4212 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4240



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++++ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLSLTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C  
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             +    +  G         Q    G G      + +++         RP+ I  LA   
Sbjct: 623 SQSSLSLTSTG---------QVYAWGCGACLGCGSSEATAL-------RPKLIEELAATR 666

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
           IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 25/275 (9%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             G+LG+G   +     PK ++ L+GM +  V  G
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAG 622



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4267 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4324

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4325 LQGKNIRQISAGRCHSAAWT 4344



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +++   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LSLTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 389

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 132/279 (47%), Gaps = 44/279 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
           SP  +  L GV I  V A     HC+AVD +GR Y WG NE GQ G   +        ++
Sbjct: 84  SPAPVEALAGVKI--VQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALR 141

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
           RD PT      K K+++  AG +H+VV+T++G+   +G  W        G I+    P  
Sbjct: 142 RDIPTPQRCALKLKVQQVAAGGTHSVVLTQEGHVWTWGQPWPP------GDIKQISTPVR 195

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           V+ L  +V   A GA   + LS  E A +   G  +YGQLG G                +
Sbjct: 196 VQGL-EKVMMIAVGAFHNLALS--EDAVLWAWGNNEYGQLGIG----------------D 236

Query: 216 AQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVP 272
            QPR  P  +  L+G ++V +A G  H+ A+   G VY WG G +GRLG  + K    VP
Sbjct: 237 TQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVP 296

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            +V +    +++     +S G  +S      G+++ +G+
Sbjct: 297 LKVQLLDGEDIV----QVSCGGTHSVALTSDGRIFSYGR 331



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 146/334 (43%), Gaps = 40/334 (11%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   ++D    V+ L  Y +    AG  +++ + +DG    +GWN+ G 
Sbjct: 13  WGSGEDGQLGMGGCDEKDWAHRVAALDPYAVSAVVAGSRNSLAICDDGRLFTWGWNQRGT 72

Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVW--LSSVEGASILNAGLPQYGQLGH 197
           LG     + E  P+PV  L   ++   A G     W  L+  +       G  +YGQ G 
Sbjct: 73  LGHPPETKTESSPAPVEALAGVKIVQAAIGG----WHCLAVDDKGRAYAWGGNEYGQCG- 127

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
               E   K+   +      P P+  A      + +VA G  H+V +  +G+V+TWG   
Sbjct: 128 ---EEPERKEDGTRALRRDIPTPQRCALKL--KVQQVAAGGTHSVVLTQEGHVWTWG--- 179

Query: 258 YGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                       W P   +++    R   L    +I+ G+ ++   +    L+ WG  + 
Sbjct: 180 ----------QPWPPGDIKQISTPVRVQGLEKVMMIAVGAFHNLALSEDAVLWAWGNNEY 229

Query: 315 N----GDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPY 367
                GD     +P+    LSG +L  + +G  H   +  D    +WG  ++G LG+G  
Sbjct: 230 GQLGIGDTQPRSQPIRVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFG-- 287

Query: 368 GQKSSAM-PKKVDILEGMHVISVACGYGHSLVIV 400
             KSS M P KV +L+G  ++ V+CG  HS+ + 
Sbjct: 288 DDKSSHMVPLKVQLLDGEDIVQVSCGGTHSVALT 321



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 171/385 (44%), Gaps = 57/385 (14%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSEL 107
           R+  L    +  V AG  S + +A+  +GR +TWG N+RG LGH  + + +  P  V  L
Sbjct: 34  RVAALDPYAVSAVVAG--SRNSLAICDDGRLFTWGWNQRGTLGHPPETKTESSPAPVEAL 91

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------SGSIRNEIEPSPVRC 158
           +  KI +A  G  H + V + G + A+G N++GQ G         + ++R +I P+P RC
Sbjct: 92  AGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDI-PTPQRC 150

Query: 159 -LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L  +V   A G   +V L+  +   +   G P       G   + +T            
Sbjct: 151 ALKLKVQQVAAGGTHSVVLT--QEGHVWTWGQP----WPPGDIKQIST------------ 192

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  +  L  E ++ +A G  H +A+     ++ WG   YG+LG  + +    P RV+ 
Sbjct: 193 --PVRVQGL--EKVMMIAVGAFHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPIRVEG 248

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSG 330
               +++     I+AG  +S+     G++Y WG+ ++     GDD    M P  +  L G
Sbjct: 249 LSGLSLVD----IAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDG 304

Query: 331 WNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAM--------PKKVDIL 381
            ++  +  G  H   + +D    S+G   +G LGYG        M        PK     
Sbjct: 305 EDIVQVSCGGTHSVALTSDGRIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKTSAGP 364

Query: 382 EGM-HVISVACGYGHSLVIVDRTNV 405
           +G+     VACG  H+L IV  T++
Sbjct: 365 DGLWQANFVACGGRHTLAIVTWTDM 389



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 98/205 (47%), Gaps = 13/205 (6%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            + +P R++ L  V +  V A     H +A+  +   + WG NE GQLG GD   R +P 
Sbjct: 189 QISTPVRVQGLEKVMMIAVGA----FHNLALSEDAVLWAWGNNEYGQLGIGDTQPRSQPI 244

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
            V  LS   +    AG  H+  +T+DG   A+G  +HG+LG G  + + + P  V+ L  
Sbjct: 245 RVEGLSGLSLVDIAAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKSSHMVPLKVQLLDG 304

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           E +   +CG   +V L+S     I + G   +G+LG+G      T    +++     P P
Sbjct: 305 EDIVQVSCGGTHSVALTS--DGRIFSYGRGDHGRLGYG---RKVTTGHPMEVPLNLPP-P 358

Query: 221 RAIAALAGETIVK-VACGTNHTVAV 244
           +  A   G      VACG  HT+A+
Sbjct: 359 KTSAGPDGLWQANFVACGGRHTLAI 383


>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
           [Meleagris gallopavo]
          Length = 1050

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 127/280 (45%), Gaps = 36/280 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
           L +G++  GQ G GS    I P P V   + +  V   ACG + +V+L  +E   +   G
Sbjct: 2   LCWGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFL--LEDGEVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
           L   GQLGH ++                  +P  I ALAG+ IV VACG +H+VA+  +G
Sbjct: 60  LNTKGQLGHESEGS----------------KPELIGALAGQHIVHVACGESHSVALSDQG 103

Query: 249 YVYTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V++WG G  G+LG    +D   VPR +    +  +L     IS G+ +    A  GQ +
Sbjct: 104 QVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----ISCGNWHCLALAADGQFF 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            WG+       L         P+ +  L G  L  + +G  H F  + S +   WG    
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG     ++    P  V +L    V+ ++CG  H+ V+
Sbjct: 220 GQLGLS--DERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 143/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG +  GQ G G  +Q     P +   +    +K+   G +H+V + EDG     G N  
Sbjct: 4   WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG  S  +  +P  +  L  + +   ACG   +V LS  +   + + G    GQLG  
Sbjct: 64  GQLGHESEGS--KPELIGALAGQHIVHVACGESHSVALS--DQGQVFSWGAGSDGQLGLT 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           T               +A   PR I  L  +TI++++CG  H +A+ + G  +TWG   Y
Sbjct: 120 TIE-------------DAVTVPRLIKKLNQQTILQISCGNWHCLALAADGQFFTWGQNSY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG  +E   +  P+RV          P A ++AG  +S   +  G ++ WGK      
Sbjct: 167 GQLGLGKECPSQASPQRVKSLDG----IPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
             ++  D   P  +  L    +  +  G  H  V   S    ++G    G+LG+     +
Sbjct: 223 GLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P++V  L G  V  +ACG  H+L  V
Sbjct: 283 VN--PRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 141/315 (44%), Gaps = 35/315 (11%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
             C   H V +  +G  YT G N +GQLGH  + +  +P ++  L+   I     G SH+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGH--ESEGSKPELIGALAGQHIVHVACGESHS 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
           V +++ G   ++G    GQLG  +I + +  P  ++ L  + +   +CG     W  L+ 
Sbjct: 97  VALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQISCGN----WHCLAL 152

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                    G   YGQLG G +               +Q  P+ + +L G  + +VA G 
Sbjct: 153 AADGQFFTWGQNSYGQLGLGKEC-------------PSQASPQRVKSLDGIPLAQVAAGG 199

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H+ A+   G V+ WG    G+LG  +++D   P  V + +   V+     IS G  +++
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV----YISCGEEHTA 255

Query: 299 CTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
                G ++ +     G+L ++  +D + P+ +++L G  +  +  G  H   FV +   
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 351 CISWGHAQYGELGYG 365
             ++G    G+LG G
Sbjct: 316 IYAFGCGTRGQLGTG 330



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R++ L G+ +  VAAG    H  A+ + G  + WG+N  GQLG  D+  R+ P  V 
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 298 QIACGRHHTLAFVPSSGM-IYAFGCGTRGQLGTG 330



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 100/231 (43%), Gaps = 19/231 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P  +  L G  I  VA G    H VA+  +G+ ++WG    GQLG    +     P ++ 
Sbjct: 75  PELIGALAGQHIVHVACG--ESHSVALSDQGQVFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVT 164
           +L++  I +   G  H + +  DG    +G N +GQLG G    ++  P  V+ L     
Sbjct: 133 KLNQQTILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A         +  S+ GA +   G    GQLG   + +  +              P  + 
Sbjct: 193 AQVAAGGAHSFALSLSGA-VFGWGKNSSGQLGLSDERDRES--------------PCHVK 237

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288


>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
 gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
           2259]
          Length = 744

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 168/371 (45%), Gaps = 51/371 (13%)

Query: 41  DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           DG L +   P +++ L GV    VA G    H +A+  +G  + WG N+ GQLG G  I 
Sbjct: 128 DGTLSTRGDPVQVQGLSGVTT--VALGA--THSLALCYDGSVWAWGANDHGQLGDGTSIA 183

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P +V+ L   ++    AG +H++ V  DG   A+G N  GQLG G+      P P++
Sbjct: 184 RRTPQMVAGLQ--EVVAVAAGANHSLAVLSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQ 241

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L S + A A G   +  L+     ++   G    GQLG G+                ++
Sbjct: 242 GL-SGIVAVASGTSHS--LALRYDGNVWAWGSNYSGQLGDGSS--------------LSR 284

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  +  L+G  IV V  G ++++AV   G V+TWG   YG+LG        + R V V
Sbjct: 285 SSPVQVTELSG--IVSVEGGPDYSMAVRYDGTVWTWGINTYGQLGDGTT----IARSVPV 338

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN--NGDD----WMYPKPLMDLSGW 331
             + + L     ++AG  ++        ++ WG   N   GD+    +  P+ +++    
Sbjct: 339 --QTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNVNGQRGDESRSVYFSPRTILN---- 392

Query: 332 NLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  M + N H   V +D    +WG    G+LG G    K+   P +V      +V+SVA
Sbjct: 393 EVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGT--TKNRWAPAEVL----GNVVSVA 446

Query: 391 CGYGHSLVIVD 401
            G  HSL + D
Sbjct: 447 AGRRHSLAVRD 457



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 147/349 (42%), Gaps = 40/349 (11%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            V     + H +AV  +G  + WG N  GQLG G    R  P  V       +    AGR
Sbjct: 394 VVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTKNRWAPAEVLG----NVVSVAAGR 449

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
            H++ V +DG+  A+G N  GQLG G+  +   P  V   +S + + A G+D++V L   
Sbjct: 450 RHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRTIPMQVPG-ISGIASVAAGSDYSVALRYD 508

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
              ++   G   YGQLG GT    +               P  +  L+G  IV +A G  
Sbjct: 509 R--TLWAWGENSYGQLGDGTTVNRHV--------------PTRVQGLSG--IVAIATGNG 550

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H +AV S G V+ WG    G+LG     +   P +V       VL     ++AG+ +S  
Sbjct: 551 HMLAVRSNGTVWAWGDNSSGQLGDGTTINRATPVQV------QVLSGIVAVAAGAAHSLA 604

Query: 300 TAGGGQLYMWG--KLKNNGDDWMYPKPL-MDLSGWNLRCMDSGNMHHFVG--ADSSCISW 354
               G L+ WG       GD    P+ +   + G       S   HH +   AD +   W
Sbjct: 605 VRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQGIGSAVAVSAAKHHSLAVLADGTLWDW 664

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMH----VISVACGYGHSLVI 399
           G   YG+LG       ++  P KV  L G+         + G+GHSL +
Sbjct: 665 GANNYGQLGRNQ--DNTNPTPSKVTTLTGVTEAVGTFGYSIGFGHSLAL 711



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/229 (31%), Positives = 102/229 (44%), Gaps = 30/229 (13%)

Query: 41  DGNLVS---PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           DG  V+   PTR++ L G+    VA    + H +AV   G  + WG N  GQLG G  I 
Sbjct: 524 DGTTVNRHVPTRVQGLSGI----VAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTIN 579

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R  P  V  LS      AGA  +H++ V  DG   A+G N   QLG G+    + P+ V+
Sbjct: 580 RATPVQVQVLSGIVAVAAGA--AHSLAVRYDGTLWAWGINNTSQLGDGTGIPRLVPTQVQ 637

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            + S V  +A        L+ +   ++ + G   YGQLG   DN                
Sbjct: 638 GIGSAVAVSAAKHHS---LAVLADGTLWDWGANNYGQLGRNQDNT--------------N 680

Query: 218 PRPRAIAALAGET----IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
           P P  +  L G T        + G  H++A+ S GY+  WG   YG+LG
Sbjct: 681 PTPSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLVGWGHNTYGQLG 729



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 87/290 (30%), Positives = 133/290 (45%), Gaps = 38/290 (13%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           +G   ++ V  DG   A+G N  GQLG G++    +P  V+ L S VT  A GA  +  L
Sbjct: 101 SGDDFSMAVRSDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGL-SGVTTVALGATHS--L 157

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           +     S+   G   +GQLG GT                A+  P+ +A L  + +V VA 
Sbjct: 158 ALCYDGSVWAWGANDHGQLGDGTS--------------IARRTPQMVAGL--QEVVAVAA 201

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G NH++AV S G V+ WG    G+LG        V RRV V  +   L     +++G+ +
Sbjct: 202 GANHSLAVLSDGTVWAWGENYDGQLGDGTT----VTRRVPVPIQG--LSGIVAVASGTSH 255

Query: 297 SSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
           S      G ++ WG   +   GD        P  + +LSG  +  ++ G  +   V  D 
Sbjct: 256 SLALRYDGNVWAWGSNYSGQLGDGSSLSRSSPVQVTELSG--IVSVEGGPDYSMAVRYDG 313

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +  +WG   YG+LG G    +S  +P +   L G  V++VA G  H+L +
Sbjct: 314 TVWTWGINTYGQLGDGTTIARS--VPVQTSGLSG--VVAVAAGRTHALAM 359



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 6/104 (5%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRS 120
           VA      H +AV  +G  + WG N  GQLG         P+ V+ L+         G S
Sbjct: 643 VAVSAAKHHSLAVLADGTLWDWGANNYGQLGRNQDNTNPTPSKVTTLTGVTEAVGTFGYS 702

Query: 121 ----HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
               H++ +  DG  + +G N +GQLG+G   N   P PV  L+
Sbjct: 703 IGFGHSLALRSDGYLVGWGHNTYGQLGTGVPEN--IPVPVLSLL 744


>gi|312373149|gb|EFR20956.1| hypothetical protein AND_18231 [Anopheles darlingi]
          Length = 1270

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 28/320 (8%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSH 121
           A C + H + +  +G+ Y+ G N+ GQLGH  + +   RP +++ L  Y I +A  G +H
Sbjct: 352 AACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTALENYIITQACCGTAH 411

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSV 179
           ++ +T  G   ++G N  GQLG  +    +I P  +R + + +V   A G    + L++ 
Sbjct: 412 SLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAKQVVQIAAGHYHCLALTN- 470

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
               +   G   YGQLG G  NE   K S+          P  + +LAG  I  +ACG N
Sbjct: 471 -SGELYAWGSNAYGQLGLGMTNE---KVST----------PTLVQSLAGVPIAFIACGGN 516

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H+ AV   G ++ WG   +G+LG  +      P ++   +   V     V      +   
Sbjct: 517 HSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGV---RYVSCGDDFSVFL 573

Query: 300 TAGGGQLY----MWGKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
           TAGGG        +G+L +   ++ + P+ + +L G  +  +  G  H   FV +     
Sbjct: 574 TAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRGKIY 633

Query: 353 SWGHAQYGELGYGPYGQKSS 372
            +G +  G+LG G  G  ++
Sbjct: 634 GFGLSGVGQLGIGIVGNYNT 653



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 136/300 (45%), Gaps = 31/300 (10%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATA- 167
           +I +A  G SHT+++T DG   + G N HGQLG    S+ N+  P  +  L + +   A 
Sbjct: 348 EIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNK-RPQLLTALENYIITQAC 406

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
           CG   ++ L++     + + G    GQLG  TD                Q  PR I ++A
Sbjct: 407 CGTAHSLALTN--WGQVYSWGSNAVGQLGQETDT-------------TRQIIPRLIRSIA 451

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE 287
            + +V++A G  H +A+ + G +Y WG   YG+LG     +E V     V     V  P 
Sbjct: 452 AKQVVQIAAGHYHCLALTNSGELYAWGSNAYGQLG-LGMTNEKVSTPTLVQSLAGV--PI 508

Query: 288 AVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSG-N 340
           A I+ G  +S   +  G ++ WGK        N+ +   +P  L  L    +R +  G +
Sbjct: 509 AFIACGGNHSFAVSKSGAIFGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDD 568

Query: 341 MHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              F+ A     + G   +G+LG+G     +  +P+ V  L G  +  +ACG  H+L  V
Sbjct: 569 FSVFLTAGGGVFTCGAGTFGQLGHG--SCNNEILPRMVFELMGSKITQIACGRRHTLAFV 626



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 86/187 (45%), Gaps = 6/187 (3%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G   G  +  + +PT ++ L GV I F+A G    H  AV   G  
Sbjct: 472 GELYAWGSNAYGQLGL--GMTNEKVSTPTLVQSLAGVPIAFIACG--GNHSFAVSKSGAI 527

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG+N  GQLG  D   R  PT +  L    ++    G   +V +T  G     G    
Sbjct: 528 FGWGKNTFGQLGLNDLNSRQFPTQLRTLRSLGVRYVSCGDDFSVFLTAGGGVFTCGAGTF 587

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG GS  NEI P  V  L+ S++T  ACG   T+      G  I   GL   GQLG G
Sbjct: 588 GQLGHGSCNNEILPRMVFELMGSKITQIACGRRHTLAFVPSRG-KIYGFGLSGVGQLGIG 646

Query: 199 TDNEYNT 205
               YNT
Sbjct: 647 IVGNYNT 653



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 88/189 (46%), Gaps = 14/189 (7%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVF 278
           PR +  +  + I + ACG +HT+ + + G +Y+ G   +G+LGH  E      P+ +   
Sbjct: 338 PRKMDWMHAKEIARAACGASHTLLLTNDGKMYSCGNNDHGQLGHDVESLPNKRPQLLTAL 397

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD--WMYPKPLMDLSGW 331
           +  N +  +A    G+ +S      GQ+Y W     G+L    D    + P+ +  ++  
Sbjct: 398 E--NYIITQA--CCGTAHSLALTNWGQVYSWGSNAVGQLGQETDTTRQIIPRLIRSIAAK 453

Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  + +G+ H     +S    +WG   YG+LG G   +K S  P  V  L G+ +  +A
Sbjct: 454 QVVQIAAGHYHCLALTNSGELYAWGSNAYGQLGLGMTNEKVST-PTLVQSLAGVPIAFIA 512

Query: 391 CGYGHSLVI 399
           CG  HS  +
Sbjct: 513 CGGNHSFAV 521



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT+LR L  + +R+V+ G      V +   G  +T G    GQLGHG       P +V E
Sbjct: 549 PTQLRTLRSLGVRYVSCG--DDFSVFLTAGGGVFTCGAGTFGQLGHGSCNNEILPRMVFE 606

Query: 107 LSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L   KI +   GR HT+  V   G    FG +  GQLG G + N   P  VR
Sbjct: 607 LMGSKITQIACGRRHTLAFVPSRGKIYGFGLSGVGQLGIGIVGNYNTPQIVR 658


>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
          Length = 883

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A   + ++P  ++ LV  +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 477 AYSSDALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 536

Query: 99  DRPTIVSEL----SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S      +  ++     G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 537 EEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 596

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 597 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 648

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ +  L    +VKV CG+  +VA+   G VY+WG G   RLGH  ++    P+
Sbjct: 649 ------PKLVEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 702

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 703 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 735



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ LVS  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 481 DALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 531

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 532 DTVPLE-----EPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 586

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 587 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSD 644

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC         +  D    SWG      LG+G   ++    
Sbjct: 645 GCKTPKLVEKLQDLDVVKVRC--GSQFSVALTKDGQVYSWGKGDNQRLGHGT--EEHVRY 700

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 701 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 731



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 151/372 (40%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N++ P +   L  + +  +A  C     + +   GR YT       Q    D +    P
Sbjct: 438 ANVIGPIQCAGLASLGVSQIA--CAEKRFLILSRSGRVYT-------QAYSSDALA---P 485

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L    I K  A     H + +   G   ++G    G+LG G      EP  +   
Sbjct: 486 QLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAF 545

Query: 160 V-----SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V   ACG+ ++  +++ EG  +   G   YG+LGHG+     ++D ++    
Sbjct: 546 CGKQAGQRVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI---- 594

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                P  +A L G  ++ VACG+    T+AV   G V++WG G YG+LG         P
Sbjct: 595 -----PMLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTP 649

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + V+  Q  +V+     +  GS  S      GQ+Y WGK  N        +   YPK L 
Sbjct: 650 KLVEKLQDLDVVK----VRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 705

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +     +  K    P  +  L+  H
Sbjct: 706 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKPE--PAALPGLDTKH 763

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 764 IVGIACGPAQSF 775



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++    GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 536 LEEPKLISAFCGKQAGQRVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 595

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P +V +L
Sbjct: 596 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLVEKL 655

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   +V +T+DG   ++G   + +LG G+  +   P              
Sbjct: 656 QDLDVVKVRCGSQFSVALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 702

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY-----NTKDSSVKLAYEAQPRPRA 222
                   L  ++G  +++        L    D+E      N +       +  +P P A
Sbjct: 703 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLHATKPEPAA 755

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 756 LPGLDTKHIVGIACGPAQSFA 776



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P   A LA   + ++AC                                           
Sbjct: 443 PIQCAGLASLGVSQIACAEKRFLILSRSGRVYTQAYSSDALAPQLVQGLVSRNIVKIAAH 502

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 503 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRVVHIACGST 562

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHF- 344
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 563 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 620

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           V  +    SWG   YG+LG G  G      PK V+ L+ + V+ V CG   S+ + 
Sbjct: 621 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLVEKLQDLDVVKVRCGSQFSVALT 674


>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
           niloticus]
          Length = 1004

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 96/338 (28%), Positives = 147/338 (43%), Gaps = 32/338 (9%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V +  +G  YT G N  GQLGH DK     P +V  L   KI     GR H+
Sbjct: 38  VGCGGQHSVFLMHDGSVYTCGSNSCGQLGH-DKAGIS-PEVVGALDTQKITMVSCGRGHS 95

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVE 180
           + V E G   A+G    GQLG G+    +  P  V+ L    ++   CG    V LS   
Sbjct: 96  MAVNEQGQLFAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALS--R 153

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              +   G    GQLG G       K    KL       P  + +LAG  + ++  G +H
Sbjct: 154 DGQLFTWGQNTSGQLGLG-------KGEPSKLF------PHPLKSLAGIPLAQITAGGDH 200

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           + A+   G V+ WG    G+LG  +++D  VP  +   +   V+     IS G  +++  
Sbjct: 201 SFALSLSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVV----YISCGDEHTAAL 256

Query: 301 AGGGQLYM-----WGKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
              G L+      WG+L + + +  + P+ +++L G  +  +  G  H   FV +     
Sbjct: 257 TKDGGLFTFGDGSWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGVVY 316

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDI-LEGMHVISV 389
           ++G   +G+LG G  G   S  P K  +  E   VI++
Sbjct: 317 AFGCNSHGQLGTGILGDARSPFPVKTSVPSEDFRVINI 354



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 125/262 (47%), Gaps = 32/262 (12%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G +  CGS     +G  K       +SP  +  L    I  V+  C   H +AV+ +G+ 
Sbjct: 52  GSVYTCGSNSCGQLGHDKAG-----ISPEVVGALDTQKITMVS--CGRGHSMAVNEQGQL 104

Query: 80  YTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           + WG  + GQLG G      R P +V  L  ++I +   G  H V ++ DG    +G N 
Sbjct: 105 FAWGAGDGGQLGLGTTETTVRIPRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNT 164

Query: 139 HGQLGSGSIR-NEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
            GQLG G    +++ P P++ L    ++++TA   G D +  LS + GA +   G  + G
Sbjct: 165 SGQLGLGKGEPSKLFPHPLKSLAGIPLAQITA---GGDHSFALS-LSGA-VFGWGKNRAG 219

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG       + +D +V         P  I  L  + +V ++CG  HT A+   G ++T+
Sbjct: 220 QLGLN-----DKQDRAV---------PCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTF 265

Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
           G G +G+LGH     E +PRRV
Sbjct: 266 GDGSWGQLGHGSTNSELLPRRV 287



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 148/334 (44%), Gaps = 33/334 (9%)

Query: 82  WGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG  + GQLG G +K     P      S   +K+ G G  H+V +  DG+    G N  G
Sbjct: 4   WGNAKDGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNSCG 63

Query: 141 QLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           QLG    +  I P  V  L   ++T  +CG   ++ ++  E   +   G    GQLG G 
Sbjct: 64  QLGHD--KAGISPEVVGALDTQKITMVSCGRGHSMAVN--EQGQLFAWGAGDGGQLGLG- 118

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                T +++V++       PR +  L    I +V CG  H VA+   G ++TWG    G
Sbjct: 119 -----TTETTVRI-------PRLVKRLCDHRISQVMCGNQHCVALSRDGQLFTWGQNTSG 166

Query: 260 RLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
           +LG  + +  +  P  +    ++    P A I+AG  +S   +  G ++ WGK +     
Sbjct: 167 QLGLGKGEPSKLFPHPL----KSLAGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLG 222

Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKS 371
            N+  D   P  +  L    +  +  G+ H   +  D    ++G   +G+LG+G     S
Sbjct: 223 LNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDGSWGQLGHG--STNS 280

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P++V  L G  V  +ACG  H+L  V  + V
Sbjct: 281 ELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGV 314



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 85/182 (46%), Gaps = 6/182 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           + G+L   G      +G  KG  + + + P  L+ L G+ +  + AG    H  A+ + G
Sbjct: 153 RDGQLFTWGQNTSGQLGLGKG--EPSKLFPHPLKSLAGIPLAQITAG--GDHSFALSLSG 208

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WG+N  GQLG  DK  R  P  +  L   K+     G  HT  +T+DG    FG  
Sbjct: 209 AVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQKVVYISCGDEHTAALTKDGGLFTFGDG 268

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             GQLG GS  +E+ P  V  L+ +EV+  ACG   T+      G  +   G   +GQLG
Sbjct: 269 SWGQLGHGSTNSELLPRRVLELMGTEVSQIACGRHHTLAFVPSSGV-VYAFGCNSHGQLG 327

Query: 197 HG 198
            G
Sbjct: 328 TG 329


>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
 gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
          Length = 994

 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 114/232 (49%), Gaps = 20/232 (8%)

Query: 48  TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
           T  RPL G+D R  +   C   H +A+  +G  + WG N  GQLG   ++     P  + 
Sbjct: 105 TVCRPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQ 164

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L +  + +  AG +H+ V++  G    +G N  GQLG G   +   P+ V+ L  + T 
Sbjct: 165 SLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTV 224

Query: 166 T-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + +CG + T  LS  +G ++   G   +GQLGH +      KD         +  PR +A
Sbjct: 225 SISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRLVA 268

Query: 225 ALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L G  + +V CG +HT+   DS   +Y++G G  G+LG+ EQ  + VP  V
Sbjct: 269 ELWGSKVSQVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVPLPV 320



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 97/231 (41%), Gaps = 19/231 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G L   G      +G RK        SP  L+ L  + +  ++AG    H   + + G  
Sbjct: 135 GLLFVWGENALGQLGLRKE--QAGTQSPQHLQSLCEIPVAQISAG--GNHSFVLSLSGVV 190

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG N  GQLG GD   R  PTIV  LS  K      G  HT  +++ G    FG    
Sbjct: 191 FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 250

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG  S+++E  P  V  L  S+V+   CG   T+         I + G    GQLG+G
Sbjct: 251 GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVFED-SSNRIYSFGCGMQGQLGNG 309

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAVDSKG 248
                      VK   ++ P P  +     E T+ K+  G +H+ A+  K 
Sbjct: 310 ---------EQVK---QSVPLPVLLPTECTEFTMEKLIAGEHHSFALFFKN 348



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 16/193 (8%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
           R +  L    ++++ACG  H++A+ + G ++ WG    G+LG R EQ     P+ +    
Sbjct: 108 RPLKGLDNRQVIQIACGDQHSMALSNDGLLFVWGENALGQLGLRKEQAGTQSPQHLQSLC 167

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWN 332
                 P A ISAG  +S   +  G ++ WG        L +  D ++ P  +  LSG  
Sbjct: 168 E----IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFI-PTIVKSLSGKK 222

Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
              +  G  H   +    +  ++G   +G+LG+     K    P+ V  L G  V  V C
Sbjct: 223 TVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--KDEHHPRLVAELWGSKVSQVTC 280

Query: 392 GYGHSLVIVDRTN 404
           G  H+LV  D +N
Sbjct: 281 GRHHTLVFEDSSN 293


>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
          Length = 4853

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4035 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4091

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4092 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4151

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4152 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSVVWAFGDGDYGK 4210

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4211 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4256

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4257 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4312

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4313 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 4346



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3987 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4043

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4044 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4102

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4103 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4148

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4149 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4174

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4175 ----------------LEGYQIGQVACGLNHTLAVSADGSVVWAFGDGDYGKLGLGNSTA 4218

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4219 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4247



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++++ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLSLTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C  
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             +    +  G         Q    G G      + +++         RP+ I  LA   
Sbjct: 623 SQSSLSLTSTG---------QVYAWGCGACLGCGSSEATAL-------RPKLIEELAATR 666

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
           IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 25/275 (9%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             G+LG+G   +     PK ++ L+GM +  V  G
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAG 622



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4274 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4331

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4332 LQGKNIRQISAGRCHSAAWT 4351



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +++   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LSLTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
           latipes]
          Length = 1059

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 147/329 (44%), Gaps = 34/329 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G GR HT  + EDG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLEDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQIIVALSCGESHTLALN--DKGQVFSWGLGSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                N  +  +++       PR I +L+   + +VACG  H++A+   G++++WG   Y
Sbjct: 118 ----LNNFEECIRV-------PRNIKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG     +   VP+ +   Q      P A I+AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGMTGQSISVPQHLQSLQG----IPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D  +P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +  P+KV  L G  V  +ACG  H+L  
Sbjct: 283 VN--PRKVFELMGNVVTQIACGRQHTLAF 309



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/211 (31%), Positives = 97/211 (45%), Gaps = 19/211 (9%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKA 115
           D++     C   H +A+   G  ++WG+N  GQLG G   Q    P  +  L      + 
Sbjct: 136 DVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGIPFAQI 195

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTV 174
            AG +H+  +T  G    +G NK GQLG     +   P+ ++ L S+ V   +CG D T 
Sbjct: 196 AAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTA 255

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L+   G     AG   YGQLGH + N               +  PR +  L G  + ++
Sbjct: 256 ALTKEGGVFTFGAG--GYGQLGHNSTNH--------------EVNPRKVFELMGNVVTQI 299

Query: 235 ACGTNHTVAVD-SKGYVYTWGFGGYGRLGHR 264
           ACG  HT+A   S G + ++G GG G+LG R
Sbjct: 300 ACGRQHTLAFTPSSGKMDSFGLGGNGQLGTR 330



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 119/236 (50%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIRFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D + + A  C   H +A++ +G+ ++WG    GQLG  +  +  R P  
Sbjct: 71  SRKKPEQVVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCL--V 160
           +  LS  ++ +   G  H++ +++ G+  ++G N++GQLG G     I  P  ++ L  +
Sbjct: 131 IKSLSDVQVAQVACGYWHSLALSKGGHIFSWGQNRYGQLGLGMTGQSISVPQHLQSLQGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                 A GA  F + LS     ++   G  ++GQLG    N+              +  
Sbjct: 191 PFAQIAAGGAHSFALTLS----GAVFGWGRNKFGQLGLNDTND--------------RCF 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + AL  + ++ ++CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKV 288



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 91/344 (26%), Positives = 148/344 (43%), Gaps = 33/344 (9%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           +V P +     G  +R V  GC   H   +  +G  YT G N+ GQLGH  +  R +P  
Sbjct: 22  VVEPRKCEFFHGKRVRDV--GCGRRHTAFLLEDGTVYTCGCNDLGQLGH--EKSRKKPEQ 77

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS- 161
           V  L    I     G SHT+ + + G   ++G    GQLG  +    I  P  ++ L   
Sbjct: 78  VVALDAQIIVALSCGESHTLALNDKGQVFSWGLGSDGQLGLNNFEECIRVPRNIKSLSDV 137

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +V   ACG   ++ LS  +G  I + G  +YGQLG G   +      S+ +       P+
Sbjct: 138 QVAQVACGYWHSLALS--KGGHIFSWGQNRYGQLGLGMTGQ------SISV-------PQ 182

Query: 222 AIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRN 281
            + +L G    ++A G  H+ A+   G V+ WG   +G+LG  +  D   P  +   +  
Sbjct: 183 HLQSLQGIPFAQIAAGGAHSFALTLSGAVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQ 242

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRC 335
            V+     IS G  +++     G ++      +G+L +N  +  + P+ + +L G  +  
Sbjct: 243 RVI----YISCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNVVTQ 298

Query: 336 MDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKK 377
           +  G  H      SS    S+G    G+LG      + S  P K
Sbjct: 299 IACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVK 342



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 84/180 (46%), Gaps = 6/180 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGG +   G   +  +G   G    ++  P  L+ L G+    +AAG    H  A+ + G
Sbjct: 154 KGGHIFSWGQNRYGQLGL--GMTGQSISVPQHLQSLQGIPFAQIAAG--GAHSFALTLSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WGRN+ GQLG  D   R  P ++  L   ++     G  HT  +T++G    FG  
Sbjct: 210 AVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQRVIYISCGEDHTAALTKEGGVFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG  S  +E+ P  V  L+   VT  ACG   T+  +   G  + + GL   GQLG
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGNVVTQIACGRQHTLAFTPSSG-KMDSFGLGGNGQLG 328



 Score = 38.1 bits (87), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P+K +   G  V  V CG  H+  +++
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLLE 51


>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Felis catus]
          Length = 1143

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 11/217 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G+   ++  P  +  L G+ +  ++AG    H +A+ + G
Sbjct: 273 KGGELFAWGQNLHGQLG--IGSQFASIAIPQIVENLSGIPLVQISAG--KAHSMALSMSG 328

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G    +D P+++  L   K++    G SHT ++T+DG    FG  
Sbjct: 329 NIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAG 388

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           KHGQLG  S +NE+ P  V  L  + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 389 KHGQLGHNSTQNELRPRLVTELAGNRVTQIACGRQHTLAYVSDLG-KVFSFGSGKEGQLG 447

Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
           + GT N+         S+ +L +E++   + +  +AG
Sbjct: 448 NGGTHNQLIPLPMKLPSNEELTFESRASEKELIMIAG 484



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/260 (30%), Positives = 124/260 (47%), Gaps = 25/260 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G +      P IV  LS   + +  AG+
Sbjct: 259 IQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLVQISAGK 318

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G    +  PS +  L ++ V   ACG   T  L+ 
Sbjct: 319 AHSMALSMSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQKVEFLACGGSHTALLT- 377

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +   +   G  ++GQLGH  T NE                RPR +  LAG  + ++ACG
Sbjct: 378 -KDGLVFTFGAGKHGQLGHNSTQNEL---------------RPRLVTELAGNRVTQIACG 421

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             HT+A V   G V+++G G  G+LG+    ++ +P  + +   N  L  E+  S   + 
Sbjct: 422 RQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELTFESRASEKEL- 479

Query: 297 SSCTAGGGQ-LYMWGKLKNN 315
               AGG Q + +W   KN+
Sbjct: 480 -IMIAGGNQSILLWMGKKNS 498



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 78/177 (44%), Gaps = 14/177 (7%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N HGQLG GS    I    +   +S +   
Sbjct: 253 LQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPLV 312

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A     ++     +I + G   +GQLG G                + +  P  I AL
Sbjct: 313 QISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHT--------------DGKDFPSLIEAL 358

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             + +  +ACG +HT  +   G V+T+G G +G+LGH   ++E  PR V     N V
Sbjct: 359 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAGNRV 415



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 18/190 (9%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQ 279
           R    L  + I+++ CG  H++A+   G ++ WG   +G+LG   Q     +P+ V+   
Sbjct: 248 RFQCILQEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVE--- 304

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGW 331
            N    P   ISAG  +S   +  G +Y WG+           +G D  +P  +  L   
Sbjct: 305 -NLSGIPLVQISAGKAHSMALSMSGNIYSWGRNDFGQLGLGHTDGKD--FPSLIEALDNQ 361

Query: 332 NLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H   +  D    ++G  ++G+LG+     ++   P+ V  L G  V  +A
Sbjct: 362 KVEFLACGGSHTALLTKDGLVFTFGAGKHGQLGHN--STQNELRPRLVTELAGNRVTQIA 419

Query: 391 CGYGHSLVIV 400
           CG  H+L  V
Sbjct: 420 CGRQHTLAYV 429


>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
           sativus]
          Length = 806

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 156/381 (40%), Gaps = 54/381 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D+  +A  C   H V V  +G  ++WG    G+LGHG +     P I+  
Sbjct: 281 PKALESTVVLDVHGIA--CGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDT 338

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--E 162
           LS   ++    G  HT  VT  G+   +G   H  G LG GS  +   P  V   +    
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVSGQMEGIR 398

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+  +CGA  T  ++S     +   G   +G LGHG     N               PR 
Sbjct: 399 VSYISCGAWHTAVVTS--AGQLFTFGDGSFGALGHGDHITSNF--------------PRE 442

Query: 223 IAALAGETIVKVACGTNHTVAV---------------DSKGYVYTWGFGGYGRLGHREQK 267
           +  L G    KVACG  HT A                 S   +YTWG G  GRLGH + +
Sbjct: 443 VETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNE 502

Query: 268 DEWVPRRVDVFQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
              VP  V       +           A+ +AG V +  +   GQL   G    NG    
Sbjct: 503 PRLVPECVAALMEERICQVACGNDLTVALTTAGRVYTMGSTAYGQL---GSATANGK--- 556

Query: 321 YPKPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
            P  +  +++   +  +  G+ H   + + +   +WG    G+LG+G    +++  P  V
Sbjct: 557 LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNT--PTIV 614

Query: 379 DILEGMHVISVACGYGHSLVI 399
           D+L+   V +VACG   ++VI
Sbjct: 615 DVLKDKQVKNVACGSKFTVVI 635


>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
            [Ornithorhynchus anatinus]
          Length = 4866

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 150/334 (44%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4048 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4104

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4105 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMFTFG 4164

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4165 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVST-DGSMVWAFGDGDYGK 4223

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4224 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4269

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P++V V     +      ++ G+ ++      G +Y WG    
Sbjct: 4270 QDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLAITSTGDVYAWGSNSE 4325

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4326 GQLGLGHTNHVREPTLITVLQGKNIRQISAGRCH 4359



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ V+      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLVEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G  ++ + +G  H      +  D   ++W  
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHR 747

Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
               +L    +    S + +  D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/331 (26%), Positives = 136/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+        S  + ++   G++ T V+  +G  LA 
Sbjct: 4000 GKCDVYLWGAGRHGQLAEAG---RNVMIPAGAPSFSQAQQVICGQNCTFVIQANGTVLAC 4056

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4057 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4115

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V + G ++
Sbjct: 4116 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKMF 4161

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4162 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4187

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V  D S + ++G   YG+LG G    
Sbjct: 4188 ----------------LEGYQIGQVACGLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTA 4231

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4232 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4260



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGVAIQQISAGTSHSL 731



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ +  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLVEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 25/290 (8%)

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           T +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S+   G   YG+LG G  N  +T     KL +E     + +++  G           HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 470

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A  ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+   
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527

Query: 302 GGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
             G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+++ 
Sbjct: 4287 PQQVPVLAGVVIEDVAVGAE--HTLAITSTGDVYAWGSNSEGQLGLGHTNHVREPTLITV 4344

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4345 LQGKNIRQISAGRCHSAAWT 4364



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 43/126 (34%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP +V EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLVEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
 gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
            SB210]
          Length = 1984

 Score =  100 bits (250), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 98/362 (27%), Positives = 157/362 (43%), Gaps = 59/362 (16%)

Query: 74   DVEGRCYTWGRNERGQLGH---------GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
            D  G  ++WG+N  GQ+G+           KI+ + P ++  L    +     G  H+V 
Sbjct: 1497 DAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVA 1556

Query: 125  VTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
            +T  G  LA+G N H QLG G  S  +   P+P+  L + + + +CG++ T+ L  +   
Sbjct: 1557 ITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPIPAL-TNIQSVSCGSEHTLALDYI--G 1613

Query: 183  SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
             + + G  + G LGHG +              +  P P+ I AL G  +  + CG  H++
Sbjct: 1614 QVFSWGNGEGGLLGHGNE--------------DVCPSPKIIEALKGLNVDFIVCGGLHSL 1659

Query: 243  AVDSKGYVYTWGFGGYGRLG------HREQKDEWVPRRVDVFQRNNVLPPEAV----ISA 292
             +     VY+WG    G+LG        E+     P+RV    + N+   E V    I+A
Sbjct: 1660 VLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRV----KGNL---EGVGVIQIAA 1712

Query: 293  GSVNSSCTAGGGQLYMWGKLKN-------NGDDW-MYPKPLMDLSGWNLRCMDSG-NMHH 343
            G  +S   A  GQ+Y WG   N         D + +Y   L+       +    G N  +
Sbjct: 1713 GEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSN 1772

Query: 344  FVGADSSCISWGHAQYGELG-YGPYGQKSSA----MPKKVDILEGMHVISVACGYGHSLV 398
             +G +   I         L  Y P  QK +     +PKK+D    + V+ V+CG+ HSL 
Sbjct: 1773 QLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSLA 1832

Query: 399  IV 400
            +V
Sbjct: 1833 LV 1834



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 99/379 (26%), Positives = 157/379 (41%), Gaps = 37/379 (9%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P  + PL    +  VA  C   H VA+   G    WG N   QLG G+K     P     
Sbjct: 1533 PKLIVPLKDTIVTSVA--CGYQHSVAITYAGTVLAWGDNSHSQLGLGEKSPSSVPFPTPI 1590

Query: 107  LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLVS-EV 163
             +   I+    G  HT+ +   G   ++G  + G LG G+   ++ PSP  +  L    V
Sbjct: 1591 PALTNIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGN--EDVCPSPKIIEALKGLNV 1648

Query: 164  TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
                CG   ++ L+  +   + + G  + GQL  G D +  T +      Y   P+ R  
Sbjct: 1649 DFIVCGGLHSLVLT--KNRQVYSWGRNEGGQL--GIDKKLFTNEK----CYLTTPK-RVK 1699

Query: 224  AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
              L G  ++++A G  H++A+   G VY WG+   G++G   Q D +      +  + N 
Sbjct: 1700 GNLEGVGVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLGMQTDTYPVYEPQLIPKLNK 1759

Query: 284  LPPEAVISAGSVNS-------------SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSG 330
            +  E +   G  +S             S T      Y     K    D   PK +     
Sbjct: 1760 I--EKIFCCGLNDSNQLGLEKEPIKITSTTNNILDQYKPQDQKRAVTDVFIPKKMDCFHQ 1817

Query: 331  WNLRCMDSGNMHH--FVGADSS---CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
              +  +  G+ H    V AD+      +WG  ++G+LG G  GQ SS +P+ +  L+ + 
Sbjct: 1818 IPVLHVSCGHNHSLALVVADTKHYMLFAWGMHKHGQLGIGETGQNSS-VPRPITYLQDVT 1876

Query: 386  VISVACGYGHSLVIVDRTN 404
              S+ACG  HSLV+ +  N
Sbjct: 1877 TYSMACGSYHSLVVANDVN 1895



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 71/275 (25%), Positives = 110/275 (40%), Gaps = 50/275 (18%)

Query: 119  RSHTVVVTEDGNSLAFGW--NKHGQLG----------SGSIRNEIEPSPVRCLVSEVTAT 166
            + ++    +D   + F W  N  GQ+G          S  I+       V    + VT+ 
Sbjct: 1488 KDYSTFSKKDAVGVMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSV 1547

Query: 167  ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
            ACG   +V ++     ++L  G   + QLG G  +      SSV       P P  I AL
Sbjct: 1548 ACGYQHSVAITY--AGTVLAWGDNSHSQLGLGEKSP-----SSV-------PFPTPIPAL 1593

Query: 227  AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
                I  V+CG+ HT+A+D  G V++WG G  G LGH  +     P+ ++  +  NV   
Sbjct: 1594 T--NIQSVSCGSEHTLALDYIGQVFSWGNGEGGLLGHGNEDVCPSPKIIEALKGLNV--- 1648

Query: 287  EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM---------------DLSGW 331
               I  G ++S       Q+Y WG  +N G      K L                +L G 
Sbjct: 1649 -DFIVCGGLHSLVLTKNRQVYSWG--RNEGGQLGIDKKLFTNEKCYLTTPKRVKGNLEGV 1705

Query: 332  NLRCMDSGNMHHFVGA-DSSCISWGHAQYGELGYG 365
             +  + +G  H    A +     WG+   G++G G
Sbjct: 1706 GVIQIAAGEAHSLALALNGQVYGWGYNMNGQIGLG 1740



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 84/217 (38%), Gaps = 64/217 (29%)

Query: 193  GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
            GQ+G+  D + N     +K+ +     P+ I  L    +  VACG  H+VA+   G V  
Sbjct: 1511 GQMGNVYDPKQNLLSKKIKVNF-----PKLIVPLKDTIVTSVACGYQHSVAITYAGTVLA 1565

Query: 253  WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
            WG   + +LG  E+    VP                                        
Sbjct: 1566 WGDNSHSQLGLGEKSPSSVP---------------------------------------- 1585

Query: 313  KNNGDDWMYPKPLMDLSGWNLRCMDSGNMH----HFVGADSSCISWGHAQYGELGYGPYG 368
                    +P P+  L+  N++ +  G+ H     ++G      SWG+ + G LG+G   
Sbjct: 1586 --------FPTPIPALT--NIQSVSCGSEHTLALDYIG---QVFSWGNGEGGLLGHG--N 1630

Query: 369  QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +     PK ++ L+G++V  + CG  HSLV+     V
Sbjct: 1631 EDVCPSPKIIEALKGLNVDFIVCGGLHSLVLTKNRQV 1667



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 54/252 (21%)

Query: 15   GKEKGGEL-----LFCGSTCWDAVGRRKGALDGNLVSPTRLR-PLVGVDIRFVAAGCVSC 68
            G+ +GG+L     LF    C+             L +P R++  L GV +  +AAG    
Sbjct: 1671 GRNEGGQLGIDKKLFTNEKCY-------------LTTPKRVKGNLEGVGVIQIAAG--EA 1715

Query: 69   HCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-----RPTIVSELSKY-KIKKAGAGRSHT 122
            H +A+ + G+ Y WG N  GQ+G G  +Q D      P ++ +L+K  KI   G   S+ 
Sbjct: 1716 HSLALALNGQVYGWGYNMNGQIGLG--MQTDTYPVYEPQLIPKLNKIEKIFCCGLNDSNQ 1773

Query: 123  -------VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTV 174
                   + +T   N++   +    Q    ++ +   P  + C     V   +CG + ++
Sbjct: 1774 LGLEKEPIKITSTTNNILDQYKPQDQ--KRAVTDVFIPKKMDCFHQIPVLHVSCGHNHSL 1831

Query: 175  WL--SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
             L  +  +   +   G+ ++GQLG G   +    +SSV         PR I  L   T  
Sbjct: 1832 ALVVADTKHYMLFAWGMHKHGQLGIGETGQ----NSSV---------PRPITYLQDVTTY 1878

Query: 233  KVACGTNHTVAV 244
             +ACG+ H++ V
Sbjct: 1879 SMACGSYHSLVV 1890


>gi|23271234|gb|AAH38104.1| RCBTB1 protein [Homo sapiens]
          Length = 355

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 124/270 (45%), Gaps = 23/270 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-IVS 105
           P +L  L G  I+ ++ G    H +    +G  Y WG N   QLG+G   Q      + +
Sbjct: 65  PKKLEGLCGKKIKSLSYGS-GPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIATVQVCT 123

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV-RCL-VSEV 163
            L   ++ +   G  H++ +  DG   A+G+N  GQ+GSGS  N+  P  V  CL +  V
Sbjct: 124 NLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRV 183

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              ACG   T  ++ ++   +   G    GQLG G +                Q  P  +
Sbjct: 184 VGIACGQ--TSSMAVLDNGEVYGWGYNGNGQLGLGNNGN--------------QLTPVRV 227

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           AAL    + ++ CG  HT+A+  +G +Y WG   YG+LG   + +   P  + V ++  V
Sbjct: 228 AALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLSPAHIMV-EKERV 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           +   A  SA +  S+    GG +YMWG+ +
Sbjct: 287 VEIAACHSAHT--SAAKTQGGHVYMWGQCR 314



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 137/310 (44%), Gaps = 38/310 (12%)

Query: 102 TIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           T++S      I+K    G   S  + VT++     FG N    LG+G  ++ + P  +  
Sbjct: 11  TLLSPQEIASIRKVCVFGTSASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEG 70

Query: 159 LV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           L   ++ + + G+   V LS+ +G  +   G   Y QLG+GT N+               
Sbjct: 71  LCGKKIKSLSYGSGPHVLLSTEDGV-VYAWGHNGYSQLGNGTTNQ-------------GI 116

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
              +    L  + +V+VACG++H++A+ + G V+ WG+   G++G     ++  PR+V  
Sbjct: 117 ATVQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKV-- 174

Query: 278 FQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDL 328
               N L  + V  I+ G  +S      G++Y WG        L NNG+  + P  +  L
Sbjct: 175 ---TNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQ-LTPVRVAAL 230

Query: 329 SGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
               +  +  G  H     D   + +WG   YG+LG    G K++ +     ++E   V+
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQLG---TGNKNNLLSPAHIMVEKERVV 287

Query: 388 SV-ACGYGHS 396
            + AC   H+
Sbjct: 288 EIAACHSAHT 297



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +  G    H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 218 NGNQLTPVRVAALHSVCVNQIVCG--YAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  ++ A    +HT      G
Sbjct: 276 PAHIMVEKERVVEIAACHSAHTSAAKTQG 304


>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
          Length = 4856

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4038 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4094

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4095 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4154

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4155 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4213

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4214 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4259

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4260 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4315

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4316 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4349



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3990 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4046

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4047 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4105

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4106 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4151

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4152 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4177

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4178 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4221

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4222 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4250



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 33/323 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSEAT-ALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G  ++ + +G  H      +  D   ++W  
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747

Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
               +L    +    S + +  D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ +          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 25/290 (8%)

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           T +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S+   G   YG+LG G  N  +T     KL +E     + +++  G           HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 470

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A  ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+   
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527

Query: 302 GGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
             G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4277 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4334

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4335 LQGKNVRQISAGRCHSAAWT 4354



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
 gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
          Length = 1096

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 150/334 (44%), Gaps = 40/334 (11%)

Query: 41   DGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
            DG L       P++G+ + R +A G  + H +A+  +GR  +WG N  G+LG G  + R 
Sbjct: 782  DGTLFPRAEPVPVIGLSECRAIAGG--ATHGLALKTDGRVLSWGANAEGELGDGTTVARR 839

Query: 100  RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
             P +V  L+   +     G  H++ +  DG+  A+G N  GQLG G+  + + P  V+ L
Sbjct: 840  APAVVGPLAG--VLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTTVSRVLPVRVQGL 897

Query: 160  VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             + V A A G  F+  L+     ++   G    GQLG  T     T  S V         
Sbjct: 898  -TGVAAIAAGDGFS--LALKHDGTVWAWGGNTLGQLGDNT-----TLRSLV--------- 940

Query: 220  PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
            P    AL G  +  VA G NH++A+   G ++ WG   YG LG   Q  +  P +V    
Sbjct: 941  PVRTQALTG--VTAVAAGRNHSLALKGDGTLWAWGSNTYGELGDGTQARKLAPVQV---- 994

Query: 280  RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL------KNNGDDW-MYPKPLMDLSGWN 332
                L   + + AG  +S     GG+++ WG+       K    +W + P  +  L+  +
Sbjct: 995  --TSLTGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQVPGLT--S 1050

Query: 333  LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
               +  G  H   + +D S  +WGH   G+LG G
Sbjct: 1051 AVAVAGGGEHSLALLSDRSVWAWGHGDMGQLGTG 1084



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 155/371 (41%), Gaps = 54/371 (14%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H VA+ V+G  + WG N R QLG G + QR  P  V+ L++ K   AG G  H+V V  +
Sbjct: 308 HSVALRVDGTVWAWGSNARAQLGDGTQTQRLSPCQVTGLTQVKGVAAGGGL-HSVAVKGN 366

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA-------DFTVWLSSVEG 181
           G   A+G N  GQ+G G+   ++ P+  R LV     +A G        D T W   +  
Sbjct: 367 GEVWAWGSNSEGQVGDGTYLMKLVPTTARVLVERADVSAGGGHTLALKPDGTAWGWGLNA 426

Query: 182 ASILNAG-------------LPQYGQLGHGTDNEYNTKDSSVKLAYEAQ----------- 217
            S L  G             L +   +  GT +    K+      + A            
Sbjct: 427 QSQLGDGTTTARPLPVQVLNLTRVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTAL 486

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
            R + +        + VA G  H++A+   G V+ WG    G+LG         P R   
Sbjct: 487 NRSQPVKVSGTLVAMTVASGNFHSLALSVDGSVWAWGDNSLGQLGDGTV----TPTRNAP 542

Query: 278 FQRNNVLPPEAVIS--AGSVNSSCTAGGGQLYMWGKL------KNNGDDWMYPKPLMDLS 329
           F+  N+   E V+S  AG  +S      G +++WG+       +N G     P+ +  L+
Sbjct: 543 FRVPNL---EGVVSLAAGGEHSLALKADGTVWVWGRQDTCADPENVGRVLRVPEQVQGLT 599

Query: 330 GWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
             +   + +G  H  V  AD +  +WG    G+L  G +  + +  P +VD L G  VIS
Sbjct: 600 --DAVAVRAGRCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMT--PARVDGLTG--VIS 653

Query: 389 VACGYGHSLVI 399
            + G   +L +
Sbjct: 654 FSVGSEQTLAL 664



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 167/398 (41%), Gaps = 67/398 (16%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            ++P R+  L GV I F      S   +A+  +G  + WG N +GQLG G  + R RPT V
Sbjct: 640  MTPARVDGLTGV-ISFSVG---SEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQV 695

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
              L+  +    GA   H +V+ +D    A+G N  GQ+G G++  + + +PVR  ++   
Sbjct: 696  PTLTDVRTVAMGA--VHALVLKDDLTLWAWGSNAEGQVGDGAL--DWQAAPVRSGLAASR 751

Query: 165  ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT-----------------------DN 201
              A    +++ ++ ++G S+ + G    GQLG GT                        +
Sbjct: 752  GLAAATQYSLGIA-LDG-SVQSTGANASGQLGDGTLFPRAEPVPVIGLSECRAIAGGATH 809

Query: 202  EYNTKDSSVKLAYEAQPR-------------PRAIAALAGETIVKVACGTNHTVAVDSKG 248
                K     L++ A                P  +  LAG  ++ +A G  H++A+   G
Sbjct: 810  GLALKTDGRVLSWGANAEGELGDGTTVARRAPAVVGPLAG--VLSIAVGARHSLALLGDG 867

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             V  WG    G+LG        +P RV        L   A I+AG   S      G ++ 
Sbjct: 868  SVQAWGSNIQGQLGDGTTVSRVLPVRV------QGLTGVAAIAAGDGFSLALKHDGTVWA 921

Query: 309  WG--KLKNNGDDW----MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
            WG   L   GD+     + P     L+G  +  + +G  H   +  D +  +WG   YGE
Sbjct: 922  WGGNTLGQLGDNTTLRSLVPVRTQALTG--VTAVAAGRNHSLALKGDGTLWAWGSNTYGE 979

Query: 362  LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            LG G   +K +  P +V  L G+  +    G  HSL +
Sbjct: 980  LGDGTQARKLA--PVQVTSLTGVSALD--AGDHHSLAV 1013



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 165/423 (39%), Gaps = 65/423 (15%)

Query: 22  LLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRF---VAAGCVSCHCVAVDVEGR 78
           +L    T W   G   G L       TR  P+     R     A G    H +A+  +G 
Sbjct: 61  VLKADGTVWSWGGNNYGQLG---TGSTRQNPMPARVWRLFSITAIGAGELHSLALKSDGT 117

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            ++WG N  GQLG G  I R  P  V  L+   +    AG SH++V+  DG   A+G N 
Sbjct: 118 VWSWGANTNGQLGDGTLISRSVPAPVPGLT--NVVAIAAGFSHSMVLKADGTVWAWGLNA 175

Query: 139 HGQLGSGSIRNEIEPSPVRCL----------VSEVTATACGADFTVWLSSVEG------- 181
            GQLG G+    + P  V  L          V  +  TA G  +T W  +V+G       
Sbjct: 176 AGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWT-WGGNVDGQLGTGDL 234

Query: 182 -ASILNAGLPQYGQL----GHGTDNEYNTKDSSV---------KL---AYEAQPRPRAIA 224
                 A LP    +    G G+ +     D SV         +L   +  + P P  + 
Sbjct: 235 VGRSTAAALPGMTGVVALSGGGSHSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTPTQVP 294

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            L    +V V  G  H+VA+   G V+ WG     +LG   Q      +R+   Q   + 
Sbjct: 295 GL--TEMVAVTGGGQHSVALRVDGTVWAWGSNARAQLGDGTQT-----QRLSPCQVTGLT 347

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWG-KLKNNGDDWMYPKPLMDLSGWNLRCM------D 337
             + V + G ++S    G G+++ WG   +    D  Y   LM L     R +       
Sbjct: 348 QVKGVAAGGGLHSVAVKGNGEVWAWGSNSEGQVGDGTY---LMKLVPTTARVLVERADVS 404

Query: 338 SGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           +G  H   +  D +   WG     +LG G     ++A P  V +L    V +V+ G  HS
Sbjct: 405 AGGGHTLALKPDGTAWGWGLNAQSQLGDG----TTTARPLPVQVLNLTRVAAVSAGTYHS 460

Query: 397 LVI 399
           L +
Sbjct: 461 LAL 463



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 100/351 (28%), Positives = 142/351 (40%), Gaps = 65/351 (18%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H + +  +G  ++WG N  GQLG G   Q   P  V  L  + I   GAG  H++ +  D
Sbjct: 58  HSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRL--FSITAIGAGELHSLALKSD 115

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG--------ADFTVWLSSVE 180
           G   ++G N +GQLG G++ +   P+PV  L + V A A G        AD TVW     
Sbjct: 116 GTVWSWGANTNGQLGDGTLISRSVPAPVPGL-TNVVAIAAGFSHSMVLKADGTVW----- 169

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
                  GL   GQLG GT     T              P  +  L G  +  +A G  H
Sbjct: 170 -----AWGLNAAGQLGDGTPTRRLT--------------PVQVLGLTG--VKDIAAGNVH 208

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN--VLPPEA---VISAGSV 295
           ++A+ + G ++TWG    G+LG             D+  R+    LP       +S G  
Sbjct: 209 SLALTADGRLWTWGGNVDGQLGTG-----------DLVGRSTAAALPGMTGVVALSGGGS 257

Query: 296 NSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG--ADS 349
           +S      G ++ WGK        G     P P   + G       +G   H V    D 
Sbjct: 258 HSLILKMDGSVWSWGKNDAGQLGLGSVVSTPTP-TQVPGLTEMVAVTGGGQHSVALRVDG 316

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG-HSLVI 399
           +  +WG     +LG G   Q+ S  P +V  L    V  VA G G HS+ +
Sbjct: 317 TVWAWGSNARAQLGDGTQTQRLS--PCQVTGLT--QVKGVAAGGGLHSVAV 363



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 130/296 (43%), Gaps = 41/296 (13%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AGR H++V+  DG   ++G N +GQLG+GS R    P+ V  L S +TA   G   ++ L
Sbjct: 54  AGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRLFS-ITAIGAGELHSLAL 112

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            S    ++ + G    GQLG GT            L   + P P  +  L    +V +A 
Sbjct: 113 KS--DGTVWSWGANTNGQLGDGT------------LISRSVPAP--VPGL--TNVVAIAA 154

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G +H++ + + G V+ WG    G+LG         P  V V     V      I+AG+V+
Sbjct: 155 GFSHSMVLKADGTVWAWGLNAAGQLGDGTPTRRLTP--VQVLGLTGVKD----IAAGNVH 208

Query: 297 SSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD------LSGWN-LRCMDSGNMHHFV-GAD 348
           S      G+L+ WG    N D  +    L+       L G   +  +  G  H  +   D
Sbjct: 209 SLALTADGRLWTWG---GNVDGQLGTGDLVGRSTAAALPGMTGVVALSGGGSHSLILKMD 265

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI-VDRT 403
            S  SWG    G+LG G     S+  P +V  L  M  ++V  G  HS+ + VD T
Sbjct: 266 GSVWSWGKNDAGQLGLGSV--VSTPTPTQVPGLTEM--VAVTGGGQHSVALRVDGT 317



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 146/382 (38%), Gaps = 64/382 (16%)

Query: 38  GALDGNLVSPTRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G L    V+PTR  P    ++   V+      H +A+  +G  + WGR +       + +
Sbjct: 528 GQLGDGTVTPTRNAPFRVPNLEGVVSLAAGGEHSLALKADGTVWVWGRQD--TCADPENV 585

Query: 97  QR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
            R    P  V  L+     +AG  R H+VV+  DG   A+G N  GQL  G+  + + P+
Sbjct: 586 GRVLRVPEQVQGLTDAVAVRAG--RCHSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPA 643

Query: 155 PVRCLVSEVTAT-------ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
            V  L   ++ +       A  AD T W            G    GQLG G         
Sbjct: 644 RVDGLTGVISFSVGSEQTLALKADGTAW----------AWGPNAQGQLGGGL-------- 685

Query: 208 SSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK 267
                   + PR R         +  VA G  H + +     ++ WG    G++G     
Sbjct: 686 --------SVPRTRPTQVPTLTDVRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALD 737

Query: 268 DEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPK 323
            +  P R  +     +         +   GSV S+     GQL         GD  ++P+
Sbjct: 738 WQAAPVRSGLAASRGLAAATQYSLGIALDGSVQSTGANASGQL---------GDGTLFPR 788

Query: 324 ----PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
               P++ LS    R +  G  H   +  D   +SWG    GELG G    + +  P  V
Sbjct: 789 AEPVPVIGLS--ECRAIAGGATHGLALKTDGRVLSWGANAEGELGDGTTVARRA--PAVV 844

Query: 379 DILEGMHVISVACGYGHSLVIV 400
             L G  V+S+A G  HSL ++
Sbjct: 845 GPLAG--VLSIAVGARHSLALL 864



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 81/322 (25%), Positives = 127/322 (39%), Gaps = 51/322 (15%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R  A    + H +A+  +G  + WG N  G +G G  + R +P  VS           +G
Sbjct: 449 RVAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQPVKVS--GTLVAMTVASG 506

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSI---RNEIEPSPVRCLVSEVTATACG------ 169
             H++ ++ DG+  A+G N  GQLG G++   RN   P  V  L   V+  A G      
Sbjct: 507 NFHSLALSVDGSVWAWGDNSLGQLGDGTVTPTRN--APFRVPNLEGVVSLAAGGEHSLAL 564

Query: 170 -ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
            AD TVW+               +G+     D E   +   +++  + Q    A+A  AG
Sbjct: 565 KADGTVWV---------------WGRQDTCADPENVGR--VLRVPEQVQGLTDAVAVRAG 607

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
                  C   H+V + + G ++ WG    G+L      D   P RVD      V+    
Sbjct: 608 R------C---HSVVLRADGTLWAWGRNAEGQLADGTFTDRMTPARVDGL--TGVIS--- 653

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN--GDDWMYP--KPLMDLSGWNLRCMDSGNMHHF 344
             S GS  +      G  + WG       G     P  +P    +  ++R +  G +H  
Sbjct: 654 -FSVGSEQTLALKADGTAWAWGPNAQGQLGGGLSVPRTRPTQVPTLTDVRTVAMGAVHAL 712

Query: 345 VGADSSCI-SWGHAQYGELGYG 365
           V  D   + +WG    G++G G
Sbjct: 713 VLKDDLTLWAWGSNAEGQVGDG 734



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 21/175 (12%)

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQRNNVLPPEAVIS 291
            V  G +H++ + + G V++WG   YG+LG    +   +P RV  +F           I 
Sbjct: 51  SVLAGRHHSLVLKADGTVWSWGGNNYGQLGTGSTRQNPMPARVWRLFSIT-------AIG 103

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNN--GDDWMY----PKPLMDLSGWNLRCMDSGNMHHFV 345
           AG ++S      G ++ WG   N   GD  +     P P+  L+  N+  + +G  H  V
Sbjct: 104 AGELHSLALKSDGTVWSWGANTNGQLGDGTLISRSVPAPVPGLT--NVVAIAAGFSHSMV 161

Query: 346 -GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             AD +  +WG    G+LG G   ++ +  P +V  L G  V  +A G  HSL +
Sbjct: 162 LKADGTVWAWGLNAAGQLGDGTPTRRLT--PVQVLGLTG--VKDIAAGNVHSLAL 212



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ-RDRPTI 103
            ++P ++  L GV     A      H +AV   G+ + WGRN+ GQ+G G K   +  P  
Sbjct: 989  LAPVQVTSLTGVS----ALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKGVKSNWQLLPAQ 1044

Query: 104  VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
            V  L+   +  AG G  H++ +  D +  A+G    GQLG+G   + +  SPV+ 
Sbjct: 1045 VPGLTS-AVAVAGGGE-HSLALLSDRSVWAWGHGDMGQLGTG--MSNLRLSPVQV 1095


>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Monodelphis domestica]
          Length = 1057

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  L+  +I +   G  H++ +++     ++G NKHGQLG G  ++++  P  ++ L  +
Sbjct: 131 IKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRFV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 33/326 (10%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V V  +G  YT G N+ GQLGH  +  R +P  V  L    I     G +HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
           + + + G   A+G +  GQLG       I+ P  ++ L   ++   ACG   ++ LS  +
Sbjct: 97  LALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS--K 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G+ + + G  ++GQLG G                ++Q  P+ I +L G   ++VA G  H
Sbjct: 155 GSEVFSWGQNKHGQLGLG-------------FELKSQSAPQLIKSLLGIPFMQVAAGGAH 201

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
           +  +   G ++ WG   +G+LG  ++ D +VP  +   +   ++          A+   G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
            V +    G GQL       N+    + P+ + +L G  +  +  G  H   FV +    
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
            S+G    G+LG G    + S    K
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +K+       PR I +L    IV++ACG  H++A+     V++WG   +
Sbjct: 120 GTEEY------IKV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGFELKSQSAPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 APQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331



 Score = 38.1 bits (87), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Monodelphis domestica]
          Length = 1049

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 119/236 (50%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  L+  +I +   G  H++ +++     ++G NKHGQLG G  ++++  P  ++ L  +
Sbjct: 131 IKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKHGQLGLGFELKSQSAPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRFV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 141/326 (43%), Gaps = 33/326 (10%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V V  +G  YT G N+ GQLGH  +  R +P  V  L    I     G +HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
           + + + G   A+G +  GQLG       I+ P  ++ L   ++   ACG   ++ LS  +
Sbjct: 97  LALNDKGQVYAWGLDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQIACGYYHSLALS--K 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G+ + + G  ++GQLG G                ++Q  P+ I +L G   ++VA G  H
Sbjct: 155 GSEVFSWGQNKHGQLGLG-------------FELKSQSAPQLIKSLLGIPFMQVAAGGAH 201

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
           +  +   G ++ WG   +G+LG  ++ D +VP  +   +   ++          A+   G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
            V +    G GQL       N+    + P+ + +L G  +  +  G  H   FV +    
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSIVTQIACGRQHTSAFVPSSGRI 316

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
            S+G    G+LG G    + S    K
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 145/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDTDGQLGLP 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +K+       PR I +L    IV++ACG  H++A+     V++WG   +
Sbjct: 120 GTEEY------IKV-------PRNIKSLTDIQIVQIACGYYHSLALSKGSEVFSWGQNKH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGFELKSQSAPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRFVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 APQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRFVPNLLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 298 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 743

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 163/354 (46%), Gaps = 36/354 (10%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           + L G + + +++G  S H +A+  +G  + WG N  GQLG+G       P  V  L   
Sbjct: 35  KELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLK-- 92

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
            +    AG  H++ + +DG+   +G   +GQ  S   R+   P  V+ L   + A A G 
Sbjct: 93  DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKEL-KNIVAIAAGW 151

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           DF++ + S    S+   G+  +G+LG G+                 +P    +     + 
Sbjct: 152 DFSLAVGS--DGSVWAWGINNHGELGIGS----------------LKPSAVPVKVKGLKD 193

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +V V+ G  H++A+   G V++WG+   G LG+R  +D  V   V V   ++V+     I
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIA----I 249

Query: 291 SAGSVNSSCTAGGGQLYMWGK--LKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
           SAG  +S      G +++WG   ++ NG  D+   P  +  L+   +  + +G  H    
Sbjct: 250 SAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLN--KVVAIAAGYRHSIAL 307

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            D   +  WGH  YG LG      + S +P +V  L+  +V++VA G  HS+ +
Sbjct: 308 KDDGTVWVWGHNSYGVLGSNV--GEHSFLPVQVKGLK--NVVAVAAGRLHSVAL 357



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 162/400 (40%), Gaps = 73/400 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L   D+  V+AG  + H +A+  +G  + WG    GQ      + RD  T V  
Sbjct: 85  PVRVKGLK--DVVAVSAG--TFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKV 138

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
                I    AG   ++ V  DG+  A+G N HG+LG GS++    P  V+ L  +V A 
Sbjct: 139 KELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGL-KDVVAV 197

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           + G   +  L+     ++ + G  + G+LG+       T+D +V +    +     IA  
Sbjct: 198 SAGLYHS--LALKRDGTVWSWGYNEDGELGNRP-----TEDYTVSVPVRVKGLSDVIAIS 250

Query: 227 AG---------------------------------------ETIVKVACGTNHTVAVDSK 247
           AG                                         +V +A G  H++A+   
Sbjct: 251 AGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDD 310

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G V+ WG   YG LG    +  ++P +V   +  NV+     ++AG ++S      G ++
Sbjct: 311 GTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLK--NVVA----VAAGRLHSVALTKNGTIW 364

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG         +NN      P  +  L   N+  + +G  H   +  D +  SWG    
Sbjct: 365 AWGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIAAGGSHTLAIKRDGTVWSWGANNK 422

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG G Y  KSS +P  V  L     + V  G  HSL +
Sbjct: 423 GQLGNGTY--KSSYIPTCVKGLN--KAVLVEAGSQHSLAV 458



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/332 (24%), Positives = 147/332 (44%), Gaps = 60/332 (18%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G +   G+  +  +GR   +   NL  P +++ L  V    VA      H +A+  +G
Sbjct: 359 KNGTIWAWGNNAFGQLGRENNSFSLNL--PYKVKWLDNV----VAIAAGGSHTLAIKRDG 412

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             ++WG N +GQLG+G       PT V  L+K  + +AG+   H++ V +DG    +G+ 
Sbjct: 413 TVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLVEAGS--QHSLAVDKDGTVWVWGF- 469

Query: 138 KHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADF--------TVW------------- 175
                   + ++ + P P++   ++++T  A G D+         +W             
Sbjct: 470 IESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTD 529

Query: 176 -----------LSSVEGASILNAG------LPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
                      L +++    + AG      +   G +    D   + K+  +  +     
Sbjct: 530 SSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFS----E 585

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
           +P  I  L+G  +VKVA G  H++A+   G V++WG+  YG+LG+  ++  +VP RV   
Sbjct: 586 KPVKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL 643

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             NNV+     I+AG  +S      G +++WG
Sbjct: 644 --NNVVA----IAAGDYHSMALKKDGTVWVWG 669



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 106/226 (46%), Gaps = 45/226 (19%)

Query: 41  DGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR- 98
           D ++ S T+L  L  + ++R +AAG    H +AV  +G  ++WG      L + +K    
Sbjct: 529 DSSVSSVTKLIRLDNIKNVRSIAAGY--FHSLAVRTDGTVWSWGDT---NLDNKEKYLNF 583

Query: 99  -DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
            ++P  +  LS   + K  AG+ H++ + +DG   ++G+N +GQLG+G+      P  V+
Sbjct: 584 SEKPVKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVK 641

Query: 158 CLVSEVTATACG--------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            L + V A A G         D TVW   V G++I        GQLG       N + S+
Sbjct: 642 GL-NNVVAIAAGDYHSMALKKDGTVW---VWGSNI-------RGQLG-----RRNIEFST 685

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           V L  E             + +V +A G  H+VA+   G V+ WG 
Sbjct: 686 VPLKVEKL-----------DNVVAIAAGDTHSVALKKDGTVWVWGI 720


>gi|297673959|ref|XP_002815008.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 3
           [Pongo abelii]
          Length = 932

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 99/203 (48%), Gaps = 22/203 (10%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
           VSC   HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H
Sbjct: 24  VSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVE 180
           +  ++  G    +G N  GQLG    ++   P  V+ L   +V   +CG + T  L+   
Sbjct: 84  SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G     AG   YGQLGH + N+              +  PR +  L G  + ++ACG  H
Sbjct: 144 GVFTFGAG--SYGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187

Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
           T+A V S G +Y +G G  G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V 
Sbjct: 62  SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 119

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG   +GQLG  S+ +E+ P  V  L+ SEVT
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVT 179

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 180 QIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 212



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 16/176 (9%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
           P ++ +L++  I +   G  H + +  DG    +G N HGQLG G    ++  P  VR L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                A         +  S+ GA +   G+   GQLG   + +              +  
Sbjct: 70  EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 114

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  +  L  + +V ++CG  HT  +   G V+T+G G YG+LGH    DE  PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRV 170



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 56/190 (29%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           PR I  L  +TI++V+CG  H +A+ S G  +TWG   +G+LG  +E   +  P+RV   
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
           +      P A ++AG  +S   +  G ++ WG + N G        D   P  +  L   
Sbjct: 70  EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  V   S    ++G   YG+LG+     + +  P++V  L G  V  +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVN--PRRVLELMGSEVTQIA 182

Query: 391 CGYGHSLVIV 400
           CG  H+L  V
Sbjct: 183 CGRQHTLAFV 192



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 25/182 (13%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G +             + +Q  P+ + +L G  + +VA G  H+ A+   G V+
Sbjct: 48  HGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM--- 308
            WG    G+LG  ++KD   P  V + +   V+     IS G  +++     G ++    
Sbjct: 95  GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150

Query: 309 --WGKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
             +G+L  ++ +D + P+ +++L G  +  +  G  H   FV +     ++G    G+LG
Sbjct: 151 GSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210

Query: 364 YG 365
            G
Sbjct: 211 TG 212



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 1/100 (1%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           + V   C   H   +   G  +T+G    GQLGH        P  V EL   ++ +   G
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSYGQLGHDSMNDEVNPRRVLELMGSEVTQIACG 184

Query: 119 RSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           R HT+  V   G   AFG    GQLG+G   N   PSPV+
Sbjct: 185 RQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
           D    P+ +  L+   +  +  GN H   + +D    +WG   +G+LG G     S A P
Sbjct: 5   DSVAVPRLIQKLNQQTILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGK-EFPSQASP 63

Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
           ++V  LEG+ +  VA G  HS  +
Sbjct: 64  QRVRSLEGIPLAQVAAGGAHSFAL 87


>gi|344237346|gb|EGV93449.1| putative E3 ubiquitin-protein ligase HERC3 [Cricetulus griseus]
          Length = 461

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 100/203 (49%), Gaps = 22/203 (10%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
           VSC   HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 83

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
           +  ++  G    +G N  GQLG    ++   P  V+ L ++ V   +CG + T  L+   
Sbjct: 84  SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G     AG    GQLGHG+ N+              +  PR +  L G  + ++ACG  H
Sbjct: 144 GVFTFGAG--SCGQLGHGSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187

Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
           T+A V S G +Y +G G  G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V
Sbjct: 61  TSPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHV 118

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
             L   K+     G  HT V+T+ G    FG    GQLG GS+ +E+ P  V  L+ SEV
Sbjct: 119 KLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVLELMGSEV 178

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           T  ACG   T+      G  I   G    GQLG G
Sbjct: 179 TQIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 212



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
           P ++ +L++  I +   G  H + +  DG    +G N HGQLG G    ++  P  VR L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 69

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                A         +  S+ GA +   G+   GQLG   + +  +              
Sbjct: 70  EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKDRES-------------- 114

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  +  L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRV 170



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 16/190 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           PR I  L  +TI++V+CG  H +A+ + G  +TWG   +G+LG  +E   +  P+RV   
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 69

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
           +      P A ++AG  +S   +  G ++ WG + N G        D   P  +  L   
Sbjct: 70  EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  V   S    ++G    G+LG+G    + +  P++V  L G  V  +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVN--PRRVLELMGSEVTQIA 182

Query: 391 CGYGHSLVIV 400
           CG  H+L  V
Sbjct: 183 CGRQHTLAFV 192



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 83/182 (45%), Gaps = 25/182 (13%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G +             + +Q  P+ + +L G  + +VA G  H+ A+   G V+
Sbjct: 48  HGQLGLGKE-------------FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
            WG    G+LG  ++KD   P  V + +   V+     IS G  +++     G ++ +  
Sbjct: 95  GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150

Query: 310 ---GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
              G+L +   +D + P+ +++L G  +  +  G  H   FV +     ++G    G+LG
Sbjct: 151 GSCGQLGHGSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210

Query: 364 YG 365
            G
Sbjct: 211 TG 212



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L    + +++  C   H   +   G  +T+G    GQLGHG       P  V 
Sbjct: 114 SPCHVKLLRTQKVVYIS--CGEEHTAVLTKSGGVFTFGAGSCGQLGHGSMNDEVNPRRVL 171

Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           EL   ++ +   GR HT+  V   G   AFG    GQLG+G   N   PSPV+
Sbjct: 172 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224


>gi|90399178|emb|CAJ86040.1| H0723C07.10 [Oryza sativa Indica Group]
          Length = 1082

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 154/382 (40%), Gaps = 42/382 (10%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+ +VA G    H   V  +   +TWG    G+LGHG      +P 
Sbjct: 273 DILVPKPLESNVMLDVSYVACGVK--HAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPR 330

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  LS   ++    G  HT  +T  G+   +G   H  G LG GS  +   P  V   +
Sbjct: 331 LVESLSICNVETIACGEFHTCAITATGDLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGPL 390

Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              +V+A +CG   T  ++S     +   G   +G LGHG                E   
Sbjct: 391 EGLQVSAVSCGTWHTALITS--SGKLYTFGDGTFGVLGHGN--------------RETIS 434

Query: 219 RPRAIAALAGETIVKVACGTNHTVAV---------DSKGYVYTWGFGGYGRLGHREQ--- 266
            P+ + +L G   + V+CG  HT AV          S G ++TWG G   RLGH ++   
Sbjct: 435 YPKEVESLKGLRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSK 494

Query: 267 -KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPL 325
            K   VP  +D      V      I   +     TAG     ++G+L N  +D  YP+ +
Sbjct: 495 LKPTCVPSLIDYNFHKAVCGHTLTIGLTTSGHIFTAGSS---VYGQLGNPNNDGRYPRLV 551

Query: 326 MDLSGWNLRCMDSGNMHHFVGADSS--CISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
            +  G           +H      S    +WG    G LG+G    + +  P  V+ L  
Sbjct: 552 EEKLGGGGVVEVVCGAYHVAVLTQSGEVYTWGKGANGRLGHGDIADRKT--PTFVEALRD 609

Query: 384 MHVISVACGYGHSLVIVDRTNV 405
             V  +ACG G +  I    +V
Sbjct: 610 RSVKRIACGSGFTAAICQHKSV 631


>gi|113205520|ref|NP_001037872.1| retinitis pigmentosa GTPase regulator [Xenopus (Silurana)
           tropicalis]
 gi|77808103|gb|ABB03733.1| RPGR 1-19 isoform [Xenopus (Silurana) tropicalis]
          Length = 729

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/308 (27%), Positives = 130/308 (42%), Gaps = 76/308 (24%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G+L   GS  W  +G   G+    +  PT ++ L    +  V A C   H +    +G+ 
Sbjct: 56  GKLYVFGSNNWGQLGVEAGSA---ISKPTCVKALKSEKV--VLAACGRHHTLVYTEQGKL 110

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELS-KYKIKKAGAGRS------------------ 120
           Y+ G N  GQLG GD   R     +S  + +YKIK+  AG +                  
Sbjct: 111 YSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNS 170

Query: 121 --------------------------------HTVVVTEDGNSLAFGWNKHGQLG--SGS 146
                                           H+  VT+DG    FG  ++G+LG     
Sbjct: 171 EGQLGLEKGTIYCTPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDK 230

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           I+   +P  V  L  +VT  +CG + T+ ++  E   +   GL Q+GQLGHGT       
Sbjct: 231 IKKHKKPQRVLGLSGKVTMVSCGGEHTIAVTEKE---VYTFGLGQFGQLGHGT------- 280

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
                  +E    P+A+ AL  + I  V CG NHT  +  KG +YT+G G +G+LG  E+
Sbjct: 281 -----FIFETH-IPKAVDALTKKKIRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEE 334

Query: 267 K--DEWVP 272
              +++VP
Sbjct: 335 NFTNQFVP 342



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 139/306 (45%), Gaps = 34/306 (11%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTA 165
           L   K  +   G  HTV+VT +G    FG N  GQLG  +     +P+ V+ L SE V  
Sbjct: 34  LKNDKPARISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVL 93

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            ACG   T  L   E   + ++G    GQLG G        D++ + +++       I+ 
Sbjct: 94  AACGRHHT--LVYTEQGKLYSSGGNSEGQLGLG--------DTAGRTSFQ------EISF 137

Query: 226 LAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
              +  +K ++ G+N + A+   G ++ WG    G+LG  +      P++VD  +     
Sbjct: 138 FTAQYKIKQLSAGSNMSAALTVDGKLFMWGDNSEGQLGLEKGTIYCTPQKVDTGK----- 192

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG--------DDWMYPKPLMDLSGWNLRCM 336
            P A IS G  +S+     G+LY +G+ +N               P+ ++ LSG  +  +
Sbjct: 193 -PIAWISCGYYHSAFVTQDGELYTFGEPENGKLGLPPDKIKKHKKPQRVLGLSG-KVTMV 250

Query: 337 DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
             G  H     +    ++G  Q+G+LG+G +  ++  +PK VD L    +  V CG  H+
Sbjct: 251 SCGGEHTIAVTEKEVYTFGLGQFGQLGHGTFIFETH-IPKAVDALTKKKIRYVTCGENHT 309

Query: 397 LVIVDR 402
            +I ++
Sbjct: 310 AIITEK 315



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/287 (28%), Positives = 121/287 (42%), Gaps = 48/287 (16%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +SC   H V V   G+ Y +G N  GQLG        +PT V  L   K+  A  GR HT
Sbjct: 42  ISCGDEHTVLVTGNGKLYVFGSNNWGQLGVEAGSAISKPTCVKALKSEKVVLAACGRHHT 101

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIR-----NEIEPSPVRCLVSEVTA-TACGADFTV-- 174
           +V TE G   + G N  GQLG G         EI     +  + +++A +   A  TV  
Sbjct: 102 LVYTEQGKLYSSGGNSEGQLGLGDTAGRTSFQEISFFTAQYKIKQLSAGSNMSAALTVDG 161

Query: 175 ----WLSSVEGASILNAG----LPQYGQLGHGT--------DNEYNTKDSSV-------- 210
               W  + EG   L  G     PQ    G            + + T+D  +        
Sbjct: 162 KLFMWGDNSEGQLGLEKGTIYCTPQKVDTGKPIAWISCGYYHSAFVTQDGELYTFGEPEN 221

Query: 211 -KLAY-----EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
            KL       +   +P+ +  L+G+ +  V+CG  HT+AV  K  VYT+G G +G+LGH 
Sbjct: 222 GKLGLPPDKIKKHKKPQRVLGLSGK-VTMVSCGGEHTIAVTEK-EVYTFGLGQFGQLGHG 279

Query: 265 EQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
               E  +P+ VD   +  +      ++ G  +++     G LY +G
Sbjct: 280 TFIFETHIPKAVDALTKKKI----RYVTCGENHTAIITEKGLLYTFG 322



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 5/121 (4%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYK 111
           ++G+  +     C   H +AV  E   YT+G  + GQLGHG  I +   P  V  L+K K
Sbjct: 240 VLGLSGKVTMVSCGGEHTIAV-TEKEVYTFGLGQFGQLGHGTFIFETHIPKAVDALTKKK 298

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC---LVSEVTATAC 168
           I+    G +HT ++TE G    FG  +HG+LG G      +  P+ C   L   V + AC
Sbjct: 299 IRYVTCGENHTAIITEKGLLYTFGDGRHGKLGLGEENFTNQFVPILCSNFLKFTVQSVAC 358

Query: 169 G 169
           G
Sbjct: 359 G 359


>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
           [Ailuropoda melanoleuca]
          Length = 1035

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 25/259 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P  V  LS   + +  AG+
Sbjct: 152 IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGK 211

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G    E  PS +  L ++ V   ACG   T  L++
Sbjct: 212 AHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTT 271

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
                +   G  +YGQLGH  T NE                RPR +  LAG  + ++ACG
Sbjct: 272 --DGLVFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQIACG 314

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             HT+A V   G V+++G G  G+LG+    ++ +P  + +   N  L  E+  S   + 
Sbjct: 315 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSDKEL- 372

Query: 297 SSCTAGGGQ-LYMWGKLKN 314
               AGG Q + +W + KN
Sbjct: 373 -VMIAGGNQSVLLWMEKKN 390



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 11/217 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G L  ++ +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 166 KGGELFAWGQNLHGQLG--VGRLFASIPTPQAVEHLSGVPLVQISAG--KAHSMALSMSG 221

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G     D P+++  L   +++    G SHT ++T DG    FG  
Sbjct: 222 NVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAG 281

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  L  + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 282 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLG-KVFSFGSGKEGQLG 340

Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
           + GT N+         S+ +L +E++   + +  +AG
Sbjct: 341 NGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAG 377



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 42/289 (14%)

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           RP  V    K KI     G  H ++++ DG    + ++             IE +  +C+
Sbjct: 99  RPACVKLGKKMKIHSVDQGAEHMLILSSDGKPFEYNYS-------------IEHARFQCI 145

Query: 160 VSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
           + E  +   ACG   ++ LS  +G  +   G   +GQLG G               + + 
Sbjct: 146 LQEKSIIQIACGDYHSLALS--KGGELFAWGQNLHGQLGVGR-------------LFASI 190

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P P+A+  L+G  +V+++ G  H++A+   G VY+WG    G+LG      E  P  ++ 
Sbjct: 191 PTPQAVEHLSGVPLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIET 250

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGW 331
                V      ++ G  +++     G ++ +G  K      N+  + + P+ + +L+G 
Sbjct: 251 LDNQQV----EFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN 306

Query: 332 NLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
            +  +  G  H   +V       S+G  + G+LG G    +   +P K+
Sbjct: 307 RVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 355



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 16/189 (8%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           R    L  ++I+++ACG  H++A+   G ++ WG   +G+LG        +P    V   
Sbjct: 141 RFQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFAS-IPTPQAVEHL 199

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWN 332
           + V  P   ISAG  +S   +  G +Y WG+           +G+D  +P  +  L    
Sbjct: 200 SGV--PLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGED--FPSLIETLDNQQ 255

Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
           +  +  G  H   +  D    ++G  +YG+LG+     ++   P+ V  L G  V  +AC
Sbjct: 256 VEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHN--STQNELRPRLVTELAGNRVTQIAC 313

Query: 392 GYGHSLVIV 400
           G  H+L  V
Sbjct: 314 GRRHTLAYV 322


>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
          Length = 4850

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4032 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4088

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4089 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4148

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4149 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4207

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4208 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4253

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4254 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4309

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4310 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4343



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3984 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4040

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4041 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4099

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4100 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4145

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4146 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4171

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4172 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4215

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4216 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4244



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4271 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4328

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4329 LQGKNVRQISAGRCHSAAWT 4348



 Score = 45.1 bits (105), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1 [Felis catus]
          Length = 4861

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4354



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ + AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  V  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 74/290 (25%), Positives = 123/290 (42%), Gaps = 25/290 (8%)

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           T +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G
Sbjct: 365 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 422

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S+   G   YG+LG G  N  +T     KL +E     + +++  G           HT
Sbjct: 423 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 470

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A  ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+   
Sbjct: 471 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 527

Query: 302 GGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
             G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G
Sbjct: 528 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 587

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               G+LG+G   +     PK V+ L+GM +  V  G   SL +     V
Sbjct: 588 GGDNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359



 Score = 44.7 bits (104), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|195376505|ref|XP_002047037.1| GJ12148 [Drosophila virilis]
 gi|194154195|gb|EDW69379.1| GJ12148 [Drosophila virilis]
          Length = 1053

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 36/334 (10%)

Query: 80  YTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           Y WG    GQLG G  +  Q   P+ +       + +   G  HT+ +T  G   A G N
Sbjct: 4   YCWGNASHGQLGLGGIEDEQILTPSQIPWKPDSAVNQVACGHRHTLFLTASGKVYACGSN 63

Query: 138 KHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            + QLG     +  ++   +   V  +T  ACG+  ++ L+  E   +L+ G  + GQLG
Sbjct: 64  DYSQLGHELPTKRPLQIPELEDYV--ITQIACGSRHSMALT--EWGQVLSWGDNECGQLG 119

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           H +D +       ++L       P+ +  L  +T+V++ACG NH++A+   G +Y+WG  
Sbjct: 120 HASDQDV------IQL-------PKIVRYLVSKTVVQIACGNNHSLALTCCGELYSWGSN 166

Query: 257 GYGRLGHR---EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
            YG+LG +   E      P R+       +  P A I+ G  ++   +    ++ WG+  
Sbjct: 167 IYGQLGVKSPSELSQCNYPMRLTTL----LGIPAAAIACGGNHTFLISKSSAVFGWGRNN 222

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELGYGP 366
                 N+  +  YP  L  L    +R +  G+    F+  +    + G   YG+LG+G 
Sbjct: 223 CGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHG- 281

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               +  +P+ V  L G  +  VACG  H+L +V
Sbjct: 282 -FSSNEMLPRMVMELMGSTISQVACGNRHTLALV 314



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 29/237 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPTI 103
           P  +R LV   +  V   C + H +A+   G  Y+WG N  GQLG     +  Q + P  
Sbjct: 130 PKIVRYLVSKTV--VQIACGNNHSLALTCCGELYSWGSNIYGQLGVKSPSELSQCNYPMR 187

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLVS 161
           ++ L          G +HT ++++  +S  FGW  N  GQLG     N   P+ ++ L +
Sbjct: 188 LTTLLGIPAAAIACGGNHTFLISK--SSAVFGWGRNNCGQLGLNDETNRAYPTQLKTLRT 245

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPR 219
             V   ACG +F+V+L++  G     AG   YGQLGHG + NE                 
Sbjct: 246 LGVRFVACGDEFSVFLTNEGGVFTCGAG--AYGQLGHGFSSNEM---------------L 288

Query: 220 PRAIAALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           PR +  L G TI +VACG  HT+A V S+G +Y +G G  G+LG R  K   +P+ V
Sbjct: 289 PRMVMELMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQLGTRNTKSLNLPQVV 345



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 157/353 (44%), Gaps = 37/353 (10%)

Query: 38  GALDGNLVSPTRL--RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK 95
           G  D  +++P+++  +P   V+       C   H + +   G+ Y  G N+  QLGH  +
Sbjct: 18  GIEDEQILTPSQIPWKPDSAVN----QVACGHRHTLFLTASGKVYACGSNDYSQLGH--E 71

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PS 154
           +   RP  + EL  Y I +   G  H++ +TE G  L++G N+ GQLG  S ++ I+ P 
Sbjct: 72  LPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQLGHASDQDVIQLPK 131

Query: 155 PVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            VR LVS+ V   ACG + ++ L+      + + G   YGQLG  + +E +  +      
Sbjct: 132 IVRYLVSKTVVQIACGNNHSLALTCC--GELYSWGSNIYGQLGVKSPSELSQCN------ 183

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P  +  L G     +ACG NHT  +     V+ WG    G+LG  ++ +   P 
Sbjct: 184 -----YPMRLTTLLGIPAAAIACGGNHTFLISKSSAVFGWGRNNCGQLGLNDETNRAYPT 238

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNN-GDDWMYPKPLMD 327
           ++   +   V      ++ G   S      G ++      +G+L +    + M P+ +M+
Sbjct: 239 QLKTLRTLGV----RFVACGDEFSVFLTNEGGVFTCGAGAYGQLGHGFSSNEMLPRMVME 294

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           L G  +  +  GN H    V +      +G    G+L  G    KS  +P+ V
Sbjct: 295 LMGSTISQVACGNRHTLALVPSRGRIYGFGLGSSGQL--GTRNTKSLNLPQVV 345



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 77/178 (43%), Gaps = 4/178 (2%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           GEL   GS  +  +G +  +       P RL  L+G+     A  C   H   +      
Sbjct: 158 GELYSWGSNIYGQLGVKSPSELSQCNYPMRLTTLLGIPA--AAIACGGNHTFLISKSSAV 215

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WGRN  GQLG  D+  R  PT +  L    ++    G   +V +T +G     G   +
Sbjct: 216 FGWGRNNCGQLGLNDETNRAYPTQLKTLRTLGVRFVACGDEFSVFLTNEGGVFTCGAGAY 275

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           GQLG G   NE+ P  V  L+ S ++  ACG   T+ L    G  I   GL   GQLG
Sbjct: 276 GQLGHGFSSNEMLPRMVMELMGSTISQVACGNRHTLALVPSRG-RIYGFGLGSSGQLG 332



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 12/157 (7%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLY 307
           +Y WG   +G+LG    +DE +     +  +    P  AV  ++ G  ++      G++Y
Sbjct: 3   LYCWGNASHGQLGLGGIEDEQILTPSQIPWK----PDSAVNQVACGHRHTLFLTASGKVY 58

Query: 308 MWGK--LKNNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGEL 362
             G       G +    +PL   +L  + +  +  G+ H     +    +SWG  + G+L
Sbjct: 59  ACGSNDYSQLGHELPTKRPLQIPELEDYVITQIACGSRHSMALTEWGQVLSWGDNECGQL 118

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+    Q    +PK V  L    V+ +ACG  HSL +
Sbjct: 119 GHAS-DQDVIQLPKIVRYLVSKTVVQIACGNNHSLAL 154


>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
          Length = 894

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 519 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 578

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 579 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 638

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  +   + + G   YG+LG G  +   T        
Sbjct: 639 LVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKT-------- 690

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 691 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 744

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 745 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 777



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 122/271 (45%), Gaps = 34/271 (12%)

Query: 149 NEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKD 207
           + + P  V+ L S  +   A  +D   +L+      + + G    G+LGHG         
Sbjct: 523 DTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHG--------- 573

Query: 208 SSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G +YTWG G YGRLGH
Sbjct: 574 DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGH 628

Query: 264 REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD 318
              +DE +P  V   +   V+  +    +G   +      GQ++ W     GKL   G D
Sbjct: 629 GSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSD 686

Query: 319 -WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAM 374
               PK    L DL    +RC    ++   +  D    SWG      LG+G   ++    
Sbjct: 687 GCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDNQRLGHGT--EEHVRY 742

Query: 375 PKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           PK ++ L+G  VI VA G  H L + + + V
Sbjct: 743 PKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 773



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 93/372 (25%), Positives = 154/372 (41%), Gaps = 50/372 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            N++ P +   L  + +  +A  C     + +   GR YT   N        D +    P
Sbjct: 480 ANVIGPIQCEGLANLGVTQIA--CAEKRFLILSRNGRVYTQAYNS-------DTLA---P 527

Query: 102 TIVSELSKYKIKKAGAGRS--HTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   I K  A     H + +   G   ++G    G+LG G      EP  +   
Sbjct: 528 QLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAF 587

Query: 160 VSE-----VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
             +     V   ACG+ ++  +++ EG  +   G   YG+LGHG+     ++D ++    
Sbjct: 588 SGKQAGKHVVHIACGSTYSAAITA-EG-ELYTWGRGNYGRLGHGS-----SEDEAI---- 636

Query: 215 EAQPRPRAIAALAGETIVKVACGTN--HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                P  +A L G  ++ VACG+    T+AV   G V++WG G YG+LG         P
Sbjct: 637 -----PMLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTP 691

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKPLM 326
           + ++  Q  +V+     +  GS  S      GQ+Y WGK  N        +   YPK L 
Sbjct: 692 KLIEKLQDLDVVK----VRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLE 747

Query: 327 DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L G  +  + +G+ H   +  DS   SWG     +  +    + +   P  +  L+  H
Sbjct: 748 GLQGKKVIDVAAGSTHCLALTEDSEVHSWGSND--QCQHFDTLRVTKPEPAALPGLDTKH 805

Query: 386 VISVACGYGHSL 397
           ++ +ACG   S 
Sbjct: 806 IVGIACGPAQSF 817



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 485 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 544

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 545 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 604

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 605 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 662

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             D+  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 663 VTDNGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 716



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 578 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 637

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 638 MLVAGLKGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 697

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +   P              
Sbjct: 698 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK------------- 744

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
                   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 745 -------LLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 797

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 798 LPGLDTKHIVGIACGPAQSFA 818



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 2/126 (1%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D+  V   C S   +A+  +G+ Y+WG+ +  +LGHG +     P ++  L   K+    
Sbjct: 699 DLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVA 758

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACG-ADFTV 174
           AG +H + +TED    ++G N   Q        + EP+ +  L    +   ACG A    
Sbjct: 759 AGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFA 818

Query: 175 WLSSVE 180
           W S  E
Sbjct: 819 WSSCSE 824


>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
            [Ailuropoda melanoleuca]
          Length = 4861

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4043 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4099

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4100 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4159

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4160 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4218

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4219 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4264

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4265 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4320

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4321 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4354



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3995 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4051

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4052 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4110

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4111 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4156

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4157 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4182

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4183 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4226

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4227 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4255



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ + AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  V  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK V+ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4282 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4339

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4340 LQGKNVRQISAGRCHSAAWT 4359



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
          Length = 256

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/222 (33%), Positives = 107/222 (48%), Gaps = 22/222 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS--ELSKYKIKKA 115
           +  V+AG  + H VA+       +WGR E GQLGHGD   R  PT++S  + +   I   
Sbjct: 24  VVLVSAG--ASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSV 81

Query: 116 GAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFT 173
             G  HT   +ED   + ++GW   G+LG G+  +   P PV+ L   ++   ACG    
Sbjct: 82  ICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHC 141

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             L+      + + G  Q GQLG GT     T+DS +         P+ I +  G  +  
Sbjct: 142 --LAVTMAGEVQSWGRNQNGQLGLGT-----TEDSLL---------PQKIQSFEGVCVKM 185

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           +A G  HT AV   G +Y WG+G YG LG  ++ D  VP +V
Sbjct: 186 IAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKV 227



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 2/127 (1%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       ++ +P  ++ L G+ I+ +A  C   HC+AV + G   +WGRN+ GQ
Sbjct: 103 WGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIA--CGDSHCLAVTMAGEVQSWGRNQNGQ 160

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           LG G       P  +       +K   AG  HT  VTEDG+   +GW ++G LG G   +
Sbjct: 161 LGLGTTEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRND 220

Query: 150 EIEPSPV 156
            + P  V
Sbjct: 221 RLVPEKV 227



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/197 (28%), Positives = 95/197 (48%), Gaps = 22/197 (11%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFT 173
           AG SH+V +       ++G  + GQLG G   + + P+ +    +    +T+  CGAD T
Sbjct: 29  AGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGFDAAAPGITSVICGADHT 88

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
              S  E   + + G   +G+LGHG  ++  T              P+ + AL G  I +
Sbjct: 89  TAYSEDE-QQVYSWGWGDFGRLGHGNSSDVFT--------------PQPVKALQGIKIKQ 133

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +ACG +H +AV   G V +WG    G+LG    +D  +P+++  F+   V     +I+AG
Sbjct: 134 IACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGVCV----KMIAAG 189

Query: 294 SVNSSCTAGGGQLYMWG 310
           + +++     G LY WG
Sbjct: 190 AEHTAAVTEDGDLYGWG 206



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 67/245 (27%), Positives = 106/245 (43%), Gaps = 38/245 (15%)

Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           +P P   LVS       GA  +V L  + G  + + G  + GQLGHG        D+  +
Sbjct: 19  DPPPAVVLVS------AGASHSVAL--LAGNVLCSWGRGEDGQLGHG--------DAEDR 62

Query: 212 LAYEAQPRPRAIAAL--AGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKD 268
           L       P  ++    A   I  V CG +HT A  + +  VY+WG+G +GRLGH    D
Sbjct: 63  LV------PTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSD 116

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYP 322
            + P+ V   Q   +      I+ G  +       G++  WG+ +N        +D + P
Sbjct: 117 VFTPQPVKALQGIKI----KQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLP 172

Query: 323 KPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
           + +    G  ++ + +G  H   V  D     WG  +YG LG G    +   +P+KV  +
Sbjct: 173 QKIQSFEGVCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDR--LVPEKVSSV 230

Query: 382 EGMHV 386
           E M +
Sbjct: 231 ENMFL 235



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/161 (31%), Positives = 74/161 (45%), Gaps = 9/161 (5%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVA------VDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           RL P V       A G  S  C A       + E + Y+WG  + G+LGHG+      P 
Sbjct: 62  RLVPTVLSGFDAAAPGITSVICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQ 121

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V  L   KIK+   G SH + VT  G   ++G N++GQLG G+  + + P  ++     
Sbjct: 122 PVKALQGIKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQSFEGV 181

Query: 163 -VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
            V   A GA+ T  ++  E   +   G  +YG LG G  N+
Sbjct: 182 CVKMIAAGAEHTAAVT--EDGDLYGWGWGRYGNLGLGDRND 220



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 14/180 (7%)

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP--EA 288
           +V V+ G +H+VA+ +   + +WG G  G+LGH + +D  VP  +  F   +   P   +
Sbjct: 24  VVLVSAGASHSVALLAGNVLCSWGRGEDGQLGHGDAEDRLVPTVLSGF---DAAAPGITS 80

Query: 289 VISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
           VI      ++ +    Q+Y W     G+L + N  D   P+P+  L G  ++ +  G+ H
Sbjct: 81  VICGADHTTAYSEDEQQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSH 140

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
              V       SWG  Q G+LG G    + S +P+K+   EG+ V  +A G  H+  + +
Sbjct: 141 CLAVTMAGEVQSWGRNQNGQLGLGT--TEDSLLPQKIQSFEGVCVKMIAAGAEHTAAVTE 198



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++   GV ++ +AAG  + H  AV  +G  Y WG    G LG GD+  R  P  VS 
Sbjct: 172 PQKIQSFEGVCVKMIAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSS 229

Query: 107 LSKYKIK 113
           +    +K
Sbjct: 230 VENMFLK 236


>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
          Length = 1024

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++  PS +  L + EV   ACG   +  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGNRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  V V   +  L  E   S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKV-SSSEELKLETHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 97/186 (52%), Gaps = 14/186 (7%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   +++    G SH+ ++T+DG    FG  
Sbjct: 211 NIYSWGKNEFGQLGLGHTESKDYPSLIEALDNQEVEFLACGGSHSALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325

Query: 193 GQLGHG 198
           GQLG+G
Sbjct: 326 GQLGNG 331



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 3/117 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P+ +  L   ++ F+A G    H   +  +G  +T+G  + GQLGH       RP +V+E
Sbjct: 234 PSLIEALDNQEVEFLACG--GSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAE 291

Query: 107 LSKYKIKKAGAGRSHTVVVTED-GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
           L   ++ +   GR HT+    D G   +FG  K GQLG+G  R+++ P PV+   SE
Sbjct: 292 LVGNRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSE 348



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 78/169 (46%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  ++GQLG G                E++  P  I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGLGHT--------------ESKDYPSLI 237

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            AL  + +  +ACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 238 EALDNQEVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 126/322 (39%), Gaps = 50/322 (15%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           KI     G  H ++++ DG    +       L   SI  E           ++    CG 
Sbjct: 98  KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ LS  +G  +   G   +GQLG G               + +   P+ +  LAG  
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTTPQIVEHLAGVP 192

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           + +++ G  H++A+   G +Y+WG   +G+  LGH E KD   P  ++      V     
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEALDNQEV----E 246

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++ G  +S+     G L+ +G  K      N+  + + P  + +L G  +  +  G  H
Sbjct: 247 FLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGNRVTQIACGRWH 306

Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM---------HVISVAC 391
              +V       S+G  + G+LG G    +   +P KV   E +          +I +A 
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPVKVSSSEELKLETHTSEKELIMIAG 366

Query: 392 GYGHSLVIVDRTNVGERLDQVI 413
           G    L+ + + N    L + I
Sbjct: 367 GNQSILLWIKKENSYVNLKRTI 388


>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
          Length = 538

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/290 (27%), Positives = 127/290 (43%), Gaps = 28/290 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------KIQRDR 100
           P ++  L   DI+  A G    H +A+  +G  Y+WG N   +LG+G        I  + 
Sbjct: 67  PKKIEVLCDKDIKTFACGS-GPHVLALTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNI 125

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           PT+ + L+   I     G  H++ +TE+G   A+G N  GQ+GS    N+  P  V   +
Sbjct: 126 PTLGAGLNMKCIVDVACGSHHSLALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQVTSNL 185

Query: 161 S--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +  ++   +CG   T  +   +   +   G    GQLG G               Y  Q 
Sbjct: 186 AGKKIVHISCGQ--TSSMVVTDNGEVYGWGYNGVGQLGIGN--------------YVNQM 229

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P  + +L G  I+KVACG  HT+A+  +G +Y WG   YG+LG   + +   P  V V 
Sbjct: 230 TPSRVGSLIGVVIIKVACGYAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNP--VLVT 287

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
                +   A +    + S+    GG++YMWG  +        P P  D+
Sbjct: 288 HEMGRISDIAALHYNHI-STAVGVGGRVYMWGNCRGQSISTPTPTPFTDM 336



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 62/282 (21%)

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEG 181
           ++V +D +    G N  G LG     + + P  +  L   ++   ACG+   V L+  E 
Sbjct: 37  LLVMKDKSVYGLGNNIAGCLGISDAHSTLYPKKIEVLCDKDIKTFACGSGPHV-LALTEK 95

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             + + G   Y +LG+GT N+         L       P   A L  + IV VACG++H+
Sbjct: 96  GEVYSWGHNSYCELGNGTCNQ--------GLTPILVNIPTLGAGLNMKCIVDVACGSHHS 147

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV-ISAGSVNSSCT 300
           +A+  +G VY WG    G++G     ++  PR+V     +N+   + V IS G  +S   
Sbjct: 148 LALTEEGEVYAWGQNNCGQVGSNISTNQGSPRQV----TSNLAGKKIVHISCGQTSSMVV 203

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYG 360
              G++Y                                              WG+   G
Sbjct: 204 TDNGEVY---------------------------------------------GWGYNGVG 218

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           +LG G Y  + +  P +V  L G+ +I VACGY H+L + D 
Sbjct: 219 QLGIGNYVNQMT--PSRVGSLIGVVIIKVACGYAHTLALSDE 258



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N ++P+R+  L+GV I  VA G    H +A+  EG+ Y WG N  GQLG G+K     P 
Sbjct: 227 NQMTPSRVGSLIGVVIIKVACG--YAHTLALSDEGKLYVWGGNSYGQLGIGNKTNACNPV 284

Query: 103 IVSE 106
           +V+ 
Sbjct: 285 LVTH 288


>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
          Length = 4871

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4052 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4108

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4109 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4168

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4169 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4227

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4228 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4273

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4274 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4329

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4330 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4363



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 4004 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4060

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4061 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4119

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4120 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4165

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4166 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4191

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4192 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4235

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4236 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4264



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 134/323 (41%), Gaps = 33/323 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ + AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      ++     IS G  +    +   ++Y
Sbjct: 633 GQVYAWGCGACLGCGSSE-ATALRPKLIEELAATRIVD----ISIGDSHCLALSHDNEVY 687

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK +  L G  ++ + +G  H      +  D   ++W  
Sbjct: 688 AWGNNSMGQCGQGNSTGPITKPKKVSGLDGIAIQQISAGTSHSLAWTALPRDRQVVAWHR 747

Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
               +L    +    S + +  D
Sbjct: 748 PYCVDLEESTFSHLRSFLERYCD 770



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 375 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISTDGSVRACGKGSY 432

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 433 GRLGLGDSNNQSTLKKLTFEPHRSI--KKVSSSKGSDGHTLAFTTEG-EVFSWGDGDYGK 489

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 490 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTW 535

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 536 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 595

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ V          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 596 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 655

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 656 PKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVSG 714

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 715 LDGIAIQQISAGTSHSL 731



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  V  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK V+ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4291 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4348

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4349 LQGKNVRQISAGRCHSAAWT 4368



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
 gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
          Length = 958

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P IV  LS   + +  AG 
Sbjct: 150 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 209

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G   N+  PS +  L  + V   ACG   T  L+ 
Sbjct: 210 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT- 268

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +   +   G  +YGQLGH  T NE                RPR +  L G  + ++ACG
Sbjct: 269 -KSGLVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACG 312

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
             HT+A V   G V+++G G  G+LG+   +++ +PR
Sbjct: 313 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 349



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 6/182 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G +  +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 164 KGGELFAWGQNLDGQLG--VGRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSG 219

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G    ++ P+ +  L   K++    G  HT ++T+ G    FG  
Sbjct: 220 NVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDG 279

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  LV + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 280 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLG 338

Query: 197 HG 198
           +G
Sbjct: 339 NG 340



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 14/169 (8%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N  GQLG G I        +   +S V   
Sbjct: 144 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 203

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A     ++     ++ + G    GQLG G  + YN +             P  I AL
Sbjct: 204 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLG--HTYNKES------------PSCIEAL 249

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             + +  +ACG  HT  +   G V+T+G G YG+LGH   ++E  PR V
Sbjct: 250 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 298



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 18/193 (9%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R    L  + I+++ CG  H++A+   G ++ WG    G+LG  R       P  V+   
Sbjct: 139 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--- 195

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKP--LMDLSGW 331
            N    P   ISAG  +S   +  G +Y WG+  N+      G  +    P  +  L   
Sbjct: 196 -NLSGVPLVQISAGEAHSMALSMSGNVYSWGR--NDCGQLGLGHTYNKESPSCIEALDDQ 252

Query: 332 NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  +   S  + ++G  +YG+LG+     ++   P+ V  L G  V  +A
Sbjct: 253 KVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQIA 310

Query: 391 CGYGHSLVIVDRT 403
           CG  H+L  V  T
Sbjct: 311 CGRQHTLAYVSDT 323


>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
          Length = 1016

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17  EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
           +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 198 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 254

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
            G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 255 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 314

Query: 136 WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
              +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 315 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 373

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 374 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 419

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                 L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 420 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 475

Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                 + +    P  +  L G N+R + +G  H
Sbjct: 476 GQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 509



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 90/330 (27%), Positives = 138/330 (41%), Gaps = 77/330 (23%)

Query: 77  GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 150 GKCDVYLWGAGRHGQLAEAG---RNVMVPATAPSFSQAQQVICGQNCTFVIQANGTVLAC 206

Query: 135 GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 207 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 265

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 266 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 311

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T+G G YGRLG     ++ +P RV                                    
Sbjct: 312 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 337

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                           L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 338 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 381

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           KSS  P+KVD+L G+ +  VACG   S+ +
Sbjct: 382 KSS--PQKVDVLCGIGIKKVACGTQFSVAL 409



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 437 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 494

Query: 107 LSKYKIKKAGAGRSHTVVVT 126
           L    I++  AGR H+   T
Sbjct: 495 LQGKNIRQISAGRCHSAAWT 514


>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
 gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
          Length = 1020

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 162/380 (42%), Gaps = 47/380 (12%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            +++ P  L   V +D++ +A G    H      +G  + WG    G+LGHG      RP
Sbjct: 241 ADILIPKPLESDVVLDVQQIACGYR--HIALTTRQGEVFAWGEELGGRLGHGTDADISRP 298

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   ++    G  HT  VT  G+   +  G+   G LG+G+  +   P  V   
Sbjct: 299 KLVEALAVSNVEYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGP 358

Query: 160 VS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           +   +V + +CG+    W S++  +S  +   G   +G LGHG                E
Sbjct: 359 LEGVQVLSVSCGS----WHSALTTSSGKVFTFGDGTFGALGHG--------------KRE 400

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVA-VDSKGYV---------YTWGFGGYGRLGHRE 265
               P+ + AL+G   +KVACG  H+ A V+S  +V         YTWG G   +LGH +
Sbjct: 401 TVGYPKEVEALSGFRTMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGD 460

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----GKLKNNGDDWMY 321
           +    VP  V      +      V    S+  + +  G    M     G+L N   D   
Sbjct: 461 KDSRLVPTCVQSLIDYSF---HQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKQ 517

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P P+ D LSG  +  +  G+ H   + + S   +WG    G LG+G  G +    P  V+
Sbjct: 518 PIPVQDRLSGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHG--GVEDKKKPTLVE 575

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S+ACG   +  I
Sbjct: 576 ALKDRHVKSIACGSNFTTCI 595



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 86/195 (44%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACG  H      +G V+ WG    GRLGH    D   P+ V+   
Sbjct: 246 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA 305

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNG---DDWMYPKPLMDLSG 330
            +NV      I+ G  ++      G LY WG       L  NG     W+  +    L G
Sbjct: 306 VSNV----EYIACGEFHTCAVTASGDLYTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEG 361

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   +++   PK+V+ L G   + V
Sbjct: 362 VQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHGK--RETVGYPKEVEALSGFRTMKV 419

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  HS  IV+ +N
Sbjct: 420 ACGLWHSAAIVESSN 434


>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
          Length = 1106

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 161/377 (42%), Gaps = 50/377 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ +A  C   H   V  +G  ++WG    G+LGHG       P ++  
Sbjct: 303 PKALESAVVLDVQNIA--CGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIES 360

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFG---WNKHGQLGSGSIRNEIEPSPVRCLVS-- 161
           LS   I+    G  HT  VT  G+   +G   +N +G LG G+  +   P  V   +   
Sbjct: 361 LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYN-YGLLGHGNQVSHWVPKRVNGPLEGI 419

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
            V++ +CG   T  ++S     +   G   +G LGHG          SV L       PR
Sbjct: 420 HVSSISCGPWHTAVVTS--SGQLFTFGDGTFGALGHG-------DRKSVSL-------PR 463

Query: 222 AIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDE 269
            I +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH +++ +
Sbjct: 464 EIESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESK 523

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKP 324
            VP  V       ++ P   ++ G   +   +  G +Y     ++G+L N   D   P  
Sbjct: 524 LVPTCVVT-----LVEPNCQVACGHSMTVALSRSGHVYTMGSCVYGQLGNTQADGKLPIR 578

Query: 325 LM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
           +   LS   +  +  G  H   + + +   +WG    G LG+G    +++  P  V+ L+
Sbjct: 579 VEGKLSKSFVEEIACGAYHVAVLTSRTEVFTWGKGANGRLGHGDTNDRNT--PTLVEALK 636

Query: 383 GMHVISVACGYGHSLVI 399
              V S+ACG   +  I
Sbjct: 637 DKQVKSIACGTNFTAAI 653



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+A+ +     +  +ACG  H   V  +G V++WG    GRLGH    D   P+ ++   
Sbjct: 303 PKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLS 362

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG       L  +G+    W+  +    L G
Sbjct: 363 NTNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEG 418

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H  V   S    ++G   +G LG+G   +KS ++P++++ L+G+  +  
Sbjct: 419 IHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHG--DRKSVSLPREIESLKGLRTVQA 476

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 477 ACGVWHTAAVVE 488



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 83/358 (23%), Positives = 135/358 (37%), Gaps = 42/358 (11%)

Query: 74  DVEGRCYTWGRNERG--------QLGHGDKIQRDR--PTIVSELSKYKIKKAGAGRSHTV 123
           D  G  + WG             Q+G    ++ D   P  +       ++    G  H  
Sbjct: 266 DALGDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDSLLPKALESAVVLDVQNIACGGKHAA 325

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGA 182
           +VT+ G   ++G    G+LG G   +   P  +  L  + +   ACG   T  ++     
Sbjct: 326 LVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIESLSNTNIELVACGEYHTCAVTLSGDL 385

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
                G   YG LGHG    +              P+ R    L G  +  ++CG  HT 
Sbjct: 386 YTWGDGTYNYGLLGHGNQVSHWV------------PK-RVNGPLEGIHVSSISCGPWHTA 432

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAVISAGSV------ 295
            V S G ++T+G G +G LGH ++K   +PR ++  +    V     V    +V      
Sbjct: 433 VVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGVWHTAAVVEVMVG 492

Query: 296 -NSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD 348
            +SS     G+L+ WG          + +  + P  ++ L   N +     +M   +   
Sbjct: 493 NSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEPNCQVACGHSMTVALSRS 552

Query: 349 SSCISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
               + G   YG+LG     Q    +P +V+  L    V  +ACG  H  V+  RT V
Sbjct: 553 GHVYTMGSCVYGQLG---NTQADGKLPIRVEGKLSKSFVEEIACGAYHVAVLTSRTEV 607


>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
          Length = 4859

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4041 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4097

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4098 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4157

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4158 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 4216

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4217 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 4262

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 4263 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 4318

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 4319 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4352



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3993 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4049

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4050 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4108

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4109 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4154

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 4155 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 4180

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 4181 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 4224

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4225 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 4253



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 731



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 623 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 665

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 666 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 635



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4280 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4337

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4338 LQGKNVRQISAGRCHSAAWT 4357



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
            HERC1-like [Anolis carolinensis]
          Length = 4963

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 153/341 (44%), Gaps = 44/341 (12%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4134 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4190

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4191 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTADGKLFTFG 4250

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 4251 NGDYGRLGLGNTSNKKLPERVAALEGYQIGEVACGLNHTLVVST-DGSMVWAFGDGDYGK 4309

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 4310 LGLGNST--------------AKSSPQKVDILCGIGIKKVACGTQFSVALTKDGHVYTFG 4355

Query: 255  FG-------GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
                     G  R  +R Q+   VP    VF  +        I+ G+ ++   +  G +Y
Sbjct: 4356 QDRLIGLPEGRARNHNRPQQ---VPALSGVFVED--------IAVGAEHTLALSASGDVY 4404

Query: 308  MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
             WG          + +    P  +  L G ++R + +G  H
Sbjct: 4405 AWGSNSEGQLGLGHTNHVREPTLVTSLQGKSVRQISAGRCH 4445



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 41/286 (14%)

Query: 134  FGWNKHGQLGSGSIRNEIEP--SPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            +G  +HGQL     RN + P  SP  C   +V    CG + T  + +    ++L  G   
Sbjct: 4093 WGAGRHGQLAEAG-RNAVSPPPSPSFCQAQQVI---CGQNCTFVIQA--NGTVLACGEGS 4146

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKG 248
            YG+LG G  ++ +                  I+AL G  + ++  +CG++ H++A+   G
Sbjct: 4147 YGRLGQGNSDDLHVLT--------------VISALQGFVVTQLVTSCGSDGHSMALTESG 4192

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             V++WG G YG+LGH     +  PR+++  Q   V+     +S G  +S+     G+L+ 
Sbjct: 4193 EVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTADGKLFT 4248

Query: 309  WGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW--GHAQY 359
            +G        L N  +  + P+ +  L G+ +  +  G  H  V +    + W  G   Y
Sbjct: 4249 FGNGDYGRLGLGNTSNKKL-PERVAALEGYQIGEVACGLNHTLVVSTDGSMVWAFGDGDY 4307

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            G+LG G    KSS  P+KVDIL G+ +  VACG   S+ +    +V
Sbjct: 4308 GKLGLGNSTAKSS--PQKVDILCGIGIKKVACGTQFSVALTKDGHV 4351



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 471 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 530

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 531 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 588

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 589 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 634

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 635 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 655

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 656 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 702

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 703 NSTGPITKPKKVSGLDGVAIQQISAGTSHSL 733



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 509 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 564

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 565 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 624

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 625 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 667

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 668 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 701



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           VV+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 369 VVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 425

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 426 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 474

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 475 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 531

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 532 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 591

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 592 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 637



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV +  +A G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4373 PQQVPALSGVFVEDIAVGAE--HTLALSASGDVYAWGSNSEGQLGLGHTNHVREPTLVTS 4430

Query: 107  LSKYKIKKAGAGRSHT 122
            L    +++  AGR H+
Sbjct: 4431 LQGKSVRQISAGRCHS 4446



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 582 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 639

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 640 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 697

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 698 QCGQGN 703


>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
 gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
           adhaerens]
          Length = 330

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/340 (25%), Positives = 144/340 (42%), Gaps = 31/340 (9%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV--TEDGNSLAFGWN 137
           YTWG    G LGHG+ I    P +V  L  Y IK+   G  HTV     EDG   ++G  
Sbjct: 2   YTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGL-HTVFALNAEDGKVYSWGLG 60

Query: 138 KHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGA-SILNAGLPQYGQL 195
           K+G LG G++R+   P  +     S V   +C       ++SV    S+ + G     QL
Sbjct: 61  KYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQL 120

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G    Y                P+ +  L  E I+KVACG  H+ A+ +KG ++ WG 
Sbjct: 121 GVGDTEPY--------------AEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGL 166

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---- 311
           G  G+LG         P  + + ++   +     ++ G +++     GG +Y +G     
Sbjct: 167 GDDGQLGLGNYNLSTEPTILHIGEKKAKVMD---VACGDLHTCILTVGGLVYAFGSNIYG 223

Query: 312 --LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYG 368
                + + +  P  +   +      +  G+ H   +  +    +WG    G LG G   
Sbjct: 224 QIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCK 283

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGER 408
           Q+SS  P +V+      +  +ACG  H+  ++  ++  ++
Sbjct: 284 QRSS--PTEVEGFRDKKIGRIACGSKHTAALIILSSSADK 321



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 105/250 (42%), Gaps = 26/250 (10%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCH------CVAVDVEGRCYTWGRNERGQLGHGDK 95
           GNL S  R  PL     +      +SCH        +V   G  Y++G N   QLG GD 
Sbjct: 68  GNLRS--RFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDT 125

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
                P +V+ L+   I K   G+ H+  ++  GN   +G    GQLG G+     EP+ 
Sbjct: 126 EPYAEPQLVTVLNDENIIKVACGKYHSAALSAKGNLFLWGLGDDGQLGLGNYNLSTEPTI 185

Query: 156 VRC--LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
           +      ++V   ACG   T  L+   G  +   G   YGQ+   + N+++         
Sbjct: 186 LHIGEKKAKVMDVACGDLHTCILTV--GGLVYAFGSNIYGQIAAPSMNKFHL-------- 235

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P  I+    +  V V+CG+ H+ A+   G +Y WG    GRLG  + K    P 
Sbjct: 236 ------PYRISFNTSKRFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPT 289

Query: 274 RVDVFQRNNV 283
            V+ F+   +
Sbjct: 290 EVEGFRDKKI 299



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 112/274 (40%), Gaps = 24/274 (8%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           D ++ SP  +  L+  +I+ +A G  +   +  + +G+ Y+WG  + G LG G+   R  
Sbjct: 17  DIDIPSPRVVEALLAYNIKRLACGLHTVFALNAE-DGKVYSWGLGKYGILGQGNLRSRFA 75

Query: 101 PTIVSELSKYKIKKAGAGRSHTVV---VTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           P  ++      +        H      VT  G+  +FG N + QLG G      EP  V 
Sbjct: 76  PLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSNSQLGVGDTEPYAEPQLVT 135

Query: 158 CLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            L  E +   ACG   +  LS+    ++   GL   GQLG G  N               
Sbjct: 136 VLNDENIIKVACGKYHSAALSA--KGNLFLWGLGDDGQLGLGNYN------------LST 181

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           +P    I     + ++ VACG  HT  +   G VY +G   YG++         +P R+ 
Sbjct: 182 EPTILHIGEKKAK-VMDVACGDLHTCILTVGGLVYAFGSNIYGQIAAPSMNKFHLPYRIS 240

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                N       +S GS +S+     G+LY WG
Sbjct: 241 F----NTSKRFVSVSCGSFHSAAITENGKLYAWG 270



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 32/67 (47%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           RFV+  C S H  A+   G+ Y WG    G+LG GD  QR  PT V      KI +   G
Sbjct: 246 RFVSVSCGSFHSAAITENGKLYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKKIGRIACG 305

Query: 119 RSHTVVV 125
             HT  +
Sbjct: 306 SKHTAAL 312



 Score = 45.1 bits (105), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 67/169 (39%), Gaps = 21/169 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           VYTWG G  G LGH E  D   PR V+     N+   + +        +  A  G++Y W
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNI---KRLACGLHTVFALNAEDGKVYSW 57

Query: 310 GKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGHAQY 359
           G  K       N      P  +      N+  +    +H      V    S  S+G    
Sbjct: 58  GLGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGSVYSFGDNSN 117

Query: 360 GELGYG---PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            +LG G   PY +     P+ V +L   ++I VACG  HS  +  + N+
Sbjct: 118 SQLGVGDTEPYAE-----PQLVTVLNDENIIKVACGKYHSAALSAKGNL 161



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 306 LYMWGKLKN----NGDDWMYPKP--LMDLSGWNLRCMDSGNMHHFV--GADSSCISWGHA 357
           +Y WG   N    +G+D   P P  +  L  +N++ +  G    F     D    SWG  
Sbjct: 1   VYTWGSGINGALGHGEDIDIPSPRVVEALLAYNIKRLACGLHTVFALNAEDGKVYSWGLG 60

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
           +YG LG G    +S   P K+   +  +VI ++C   H+  +   TN G 
Sbjct: 61  KYGILGQG--NLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGS 108


>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
          Length = 963

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P IV  LS   + +  AG 
Sbjct: 155 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 214

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G   N+  PS +  L  + V   ACG   T  L+ 
Sbjct: 215 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLT- 273

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +   +   G  +YGQLGH  T NE                RPR +  L G  + ++ACG
Sbjct: 274 -KSGLVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACG 317

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
             HT+A V   G V+++G G  G+LG+   +++ +PR
Sbjct: 318 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 354



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 94/182 (51%), Gaps = 6/182 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G +  +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 169 KGGELFAWGQNLDGQLG--VGRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSG 224

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G    ++ P+ +  L   K++    G  HT ++T+ G    FG  
Sbjct: 225 NVYSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLACGGCHTALLTKSGLVFTFGDG 284

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  LV + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 285 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLG 343

Query: 197 HG 198
           +G
Sbjct: 344 NG 345



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 14/169 (8%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N  GQLG G I        +   +S V   
Sbjct: 149 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 208

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A     ++     ++ + G    GQLG G  + YN +             P  I AL
Sbjct: 209 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLG--HTYNKES------------PSCIEAL 254

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             + +  +ACG  HT  +   G V+T+G G YG+LGH   ++E  PR V
Sbjct: 255 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 303



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 83/193 (43%), Gaps = 18/193 (9%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R    L  + I+++ CG  H++A+   G ++ WG    G+LG  R       P  V+   
Sbjct: 144 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--- 200

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDDWMYPKP--LMDLSGW 331
            N    P   ISAG  +S   +  G +Y WG+  N+      G  +    P  +  L   
Sbjct: 201 -NLSGVPLVQISAGEAHSMALSMSGNVYSWGR--NDCGQLGLGHTYNKESPSCIEALDDQ 257

Query: 332 NLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  +   S  + ++G  +YG+LG+     ++   P+ V  L G  V  +A
Sbjct: 258 KVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQIA 315

Query: 391 CGYGHSLVIVDRT 403
           CG  H+L  V  T
Sbjct: 316 CGRQHTLAYVSDT 328


>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
          Length = 1038

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 164/380 (43%), Gaps = 49/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           + + P  L   V +D++ +A  C S H      +G  +TWG    G+LGHG      RP 
Sbjct: 248 DFLIPKPLESDVVLDVQQIA--CGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 305

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  L+   ++    G  HT VVT  G+   +G   +  G LG G+  +   P  V   +
Sbjct: 306 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 365

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG+    W S++  +S  +   G   +G LGHG D E         +AY  
Sbjct: 366 EGLQVLSVACGS----WHSALTMSSGKLFTFGDGTFGSLGHG-DRE--------SVAY-- 410

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVA-VDSKGY---------VYTWGFGGYGRLGHREQ 266
              P+ + AL+G   +KVACG  H+ A V+  G          ++TWG G   RLGH ++
Sbjct: 411 ---PKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDK 467

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
           + + VP  V     +N       ++ G   +   A  G ++       G+L N   D   
Sbjct: 468 EAKLVPTCVQALVDHNF----HQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQ 523

Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D  G  L    S   +H     + S   +WG    G LG+G    K    P  VD
Sbjct: 524 PCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKK--PTLVD 581

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S++CG   +  I
Sbjct: 582 ALKDRHVKSISCGSNFTTCI 601



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACG+ H      +G V+TWG    GRLGH    D   P+ V+   
Sbjct: 252 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLA 311

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            +NV      I+ G  ++      G LY WG    N            W+  +    L G
Sbjct: 312 VSNV----EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 367

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   ++S A PK+V+ L G   + V
Sbjct: 368 LQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHG--DRESVAYPKEVEALSGFRAMKV 425

Query: 390 ACGYGHSLVIVD 401
           ACG  HS  IV+
Sbjct: 426 ACGVWHSAAIVE 437


>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
          Length = 1132

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 152/376 (40%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG      +P ++  
Sbjct: 347 PKPLEFAVKLDVQNIS--CGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDA 404

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           L+   I+    G  HT  VT  G+   +  G +  G LG G+  +   P  V   +    
Sbjct: 405 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 464

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+A +CG   T  ++S     +   G   +G LGHG     +               PR 
Sbjct: 465 VSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV--------------PRE 508

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH ++    
Sbjct: 509 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 568

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    I+ G   +      G +Y     ++G+L N   D M P  +
Sbjct: 569 VPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRV 624

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G    +SS  P  V+ L+ 
Sbjct: 625 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PTLVEALKD 682

Query: 384 MHVISVACGYGHSLVI 399
             V +V CG   +  I
Sbjct: 683 KQVRTVVCGINFTAAI 698



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +       +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D   
Sbjct: 347 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 406

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG   +N            W+  +    L G
Sbjct: 407 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 462

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   V +     ++G   +G LG+G   ++S ++P++V+ L+G+  +  
Sbjct: 463 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 520

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 521 ACGVWHTAAVVE 532



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 37/218 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQL 90
           +L  P  +  L G  +R V A C   H  AV               G+ +TWG  ++G+L
Sbjct: 502 SLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRL 559

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GS 146
           GHGDK  R  PT V+ L +    +   G   TV +T  G+    G   +GQLG+    G 
Sbjct: 560 GHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM 619

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   +E    +  V E++   CGA     L+S     +   G    G+LGHG     +T 
Sbjct: 620 LPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHG-----DTD 669

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           D S          P  + AL  + +  V CG N T A+
Sbjct: 670 DRS---------SPTLVEALKDKQVRTVVCGINFTAAI 698


>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
           boliviensis]
          Length = 1024

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/262 (30%), Positives = 126/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  LS   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG     ++  PS +  L ++ V   ACG   T  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A LAG  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELAGNRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  + V   N  L  E+  S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKV-SSNEDLKFESHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AG  Q + +W K +N+
Sbjct: 361 L--IMIAGENQSILLWIKKENS 380



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 29/227 (12%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L G+ +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLSGIPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG      +D P+++  L   K++    G SHT ++T+DG    FG  
Sbjct: 211 NIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELAGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKE 325

Query: 193 GQLGHGTDNEYNTKD----------SSVKLAYEAQPRPRAIAALAGE 229
           GQLG+G      T+D          S+  L +E+    + +  +AGE
Sbjct: 326 GQLGNG-----GTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGE 367



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLSGIP 192

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  ++GQLG    +   +KDS           P  I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGL---DHTESKDS-----------PSLI 237

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            AL  + +  +ACG +HT  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 238 EALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R  + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLS 189

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G +Y WGK +      ++ +    P  +  L    +
Sbjct: 190 G----IPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKV 245

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +ACG
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELAGNRVTQIACG 303

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 304 RWHTLAYV 311


>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Canis lupus familiaris]
          Length = 1054

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/236 (30%), Positives = 118/236 (50%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ ++++G    +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNKYGQLGLGIDCKKQASPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  EG      G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSK-EG-EFFCWGQNKYGQLGLGID-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 144/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+  +G  + WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKEGEFFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGIDCKKQASPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
          Length = 901

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 152/376 (40%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG      +P ++  
Sbjct: 301 PKPLEFAVKLDVQNIS--CGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDA 358

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           L+   I+    G  HT  VT  G+   +  G +  G LG G+  +   P  V   +    
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+A +CG   T  ++S     +   G   +G LGHG     +               PR 
Sbjct: 419 VSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV--------------PRE 462

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH ++    
Sbjct: 463 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    I+ G   +      G +Y     ++G+L N   D M P  +
Sbjct: 523 VPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRV 578

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G    +SS  P  V+ L+ 
Sbjct: 579 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PTLVEALKD 636

Query: 384 MHVISVACGYGHSLVI 399
             V +V CG   +  I
Sbjct: 637 KQVRTVVCGINFTAAI 652



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +       +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D   
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG   +N            W+  +    L G
Sbjct: 361 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 416

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   V +     ++G   +G LG+G   ++S ++P++V+ L+G+  +  
Sbjct: 417 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 474

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 475 ACGVWHTAAVVE 486



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 37/218 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQL 90
           +L  P  +  L G  +R V A C   H  AV               G+ +TWG  ++G+L
Sbjct: 456 SLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRL 513

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GS 146
           GHGDK  R  PT V+ L +    +   G   TV +T  G+    G   +GQLG+    G 
Sbjct: 514 GHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM 573

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   +E    +  V E++   CGA     L+S     +   G    G+LGHG     +T 
Sbjct: 574 LPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHG-----DTD 623

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           D S          P  + AL  + +  V CG N T A+
Sbjct: 624 DRS---------SPTLVEALKDKQVRTVVCGINFTAAI 652


>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
          Length = 2154

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 120/240 (50%), Gaps = 20/240 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L S T +  + G  +  +A    S  H +AV  
Sbjct: 1847 QNNGTVLACGEGSYGRLG--QGNSD-DLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTE 1903

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 1904 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVTADGKLFTFG 1963

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P+ V  L S ++   ACG + T+ +S+ +G ++   G   +G+
Sbjct: 1964 NGDYGRLGLGTTTNKKVPTRVVALESHQIGYVACGLNHTLCVSA-DGTNVWAFGDGDFGK 2022

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G     NT    +         P  I AL G  I KVACGT  +VA+   G V+TWG
Sbjct: 2023 LGQG-----NTVGKHL---------PTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWG 2068



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 150/346 (43%), Gaps = 45/346 (13%)

Query: 77   GRC--YTWGRNERGQL---GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
            G+C  + WG    GQ+   G G  +    P+          ++   G++ T VV  +G  
Sbjct: 1799 GKCEAFLWGSGRNGQMCEGGRGAFVPVRVPSFSCS------QQIVCGQNCTFVVQNNGTV 1852

Query: 132  LAFGWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
            LA G   +G+LG G+   + +    S ++  V    AT+ G+D    L+  E   + + G
Sbjct: 1853 LACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHT-LAVTESGEVFSWG 1911

Query: 189  LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               YG+LGHG  +               Q RPR I AL GE +++++CG  H+  V + G
Sbjct: 1912 DGDYGKLGHGNSDR--------------QRRPRQIEALQGEEVIQLSCGFKHSAVVTADG 1957

Query: 249  YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
             ++T+G G YGRLG     ++ VP RV   + + +      ++ G  ++ C +  G   +
Sbjct: 1958 KLFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQI----GYVACGLNHTLCVSADGT-NV 2012

Query: 309  W-------GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            W       GKL + N      P  +  L G  ++ +  G      +       +WG  + 
Sbjct: 2013 WAFGDGDFGKLGQGNTVGKHLPTKIKALQGHVIKKVACGTQFSVALSKYGKVFTWGQERL 2072

Query: 360  GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +G       S+  P++V  L G  +  V CG  H+LV+    +V
Sbjct: 2073 --IGQPDTRGGSNCQPQEVASLSGYFIEDVVCGAEHTLVLTSDGDV 2116



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/125 (35%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI--QRDRPTIV 104
            PT+++ L G  I+ VA G  +   VA+   G+ +TWG+ ER  +G  D       +P  V
Sbjct: 2034 PTKIKALQGHVIKKVACG--TQFSVALSKYGKVFTWGQ-ER-LIGQPDTRGGSNCQPQEV 2089

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLVSEV 163
            + LS Y I+    G  HT+V+T DG+   +G N  GQLG G   + + EP  V CL  + 
Sbjct: 2090 ASLSGYFIEDVVCGAEHTLVLTSDGDVWGWGSNSEGQLGLGHTNSPVREPQLVPCLTGKN 2149

Query: 164  TATAC 168
                C
Sbjct: 2150 IRQVC 2154


>gi|168035996|ref|XP_001770494.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678202|gb|EDQ64663.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1125

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 157/381 (41%), Gaps = 53/381 (13%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           GA++ +   P  L   + +D+++VA  C   H   V  +G  +TWG    G+LGHG    
Sbjct: 291 GAMNLDAPLPKALESAIVLDVQYVA--CGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD 348

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSP 155
              P +V  L+    +    G  H   VT  G+   +G   H  G LG G+  +   P  
Sbjct: 349 VSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKR 408

Query: 156 VRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
           V   + E  V + ACG   T  +++     +   G   +G LGH      N + S    A
Sbjct: 409 VNGPLEEVRVASIACGPWHTAVVTTA--GQLFTFGDGTFGVLGH------NDRQS----A 456

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRL 261
           Y     PR + +L G   V+ ACG  HT AV             S G ++TWG G  GRL
Sbjct: 457 YS----PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRL 512

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNNGD 317
           GH +++   VP  V     +N      V    S+  + T  G        M+G+L +   
Sbjct: 513 GHGDKEQRLVPTCVAALVDHNF---RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQA 569

Query: 318 DWMYP----KPLMDLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKS 371
           D   P      L+D    ++ C      HH   V   S   +WG    G LG+G   Q+ 
Sbjct: 570 DGKLPGMVEGRLVDAYVEDIAC----GAHHVACVTLKSEVYTWGKGANGRLGHG--DQED 623

Query: 372 SAMPKKVDILEGMHVISVACG 392
              P  V+ L+   V S+ACG
Sbjct: 624 RNTPTLVEALKEKQVKSIACG 644



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 37/215 (17%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHG 93
           SP  +  L G  +R V A C   H  AV               G+ +TWG  ++G+LGHG
Sbjct: 458 SPREVESLKG--LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHG 515

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRN 149
           DK QR  PT V+ L  +  +K   G S TV +T  G     G +  GQLG     G +  
Sbjct: 516 DKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPG 575

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            +E   V   V ++   ACGA     ++    + +   G    G+LGHG   + NT    
Sbjct: 576 MVEGRLVDAYVEDI---ACGAHHVACVTL--KSEVYTWGKGANGRLGHGDQEDRNT---- 626

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
                     P  + AL  + +  +ACG   T AV
Sbjct: 627 ----------PTLVEALKEKQVKSIACGATFTAAV 651



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 22/197 (11%)

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P P+A+ +     +  VACG  H   V  +G V+TWG    GRLGH    D   P+ V+ 
Sbjct: 298 PLPKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEA 357

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDDWMY--PK----PL 325
              +       V++ G  +       G LY WG       L  +G+D  +  PK    PL
Sbjct: 358 LASSTT----EVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPL 413

Query: 326 MDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
            ++   ++ C   G  H   V       ++G   +G LG+    ++S+  P++V+ L+G+
Sbjct: 414 EEVRVASIAC---GPWHTAVVTTAGQLFTFGDGTFGVLGHN--DRQSAYSPREVESLKGL 468

Query: 385 HVISVACGYGHSLVIVD 401
             +  ACG  H+  +V+
Sbjct: 469 RTVRAACGVWHTAAVVE 485


>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
          Length = 993

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 122/259 (47%), Gaps = 25/259 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P  V  LS   + +  AG+
Sbjct: 109 IQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLVQISAGK 168

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G    E  PS +  L ++ V   ACG   T  L++
Sbjct: 169 AHSMALSMSGNVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTT 228

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
                +   G  +YGQLGH  T NE                RPR +  LAG  + ++ACG
Sbjct: 229 --DGLVFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQIACG 271

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             HT+A V   G V+++G G  G+LG+    ++ +P  + +   N  L  E+  S   + 
Sbjct: 272 RRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSDKEL- 329

Query: 297 SSCTAGGGQ-LYMWGKLKN 314
               AGG Q + +W + KN
Sbjct: 330 -VMIAGGNQSVLLWMEKKN 347



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 111/217 (51%), Gaps = 11/217 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G L  ++ +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 123 KGGELFAWGQNLHGQLG--VGRLFASIPTPQAVEHLSGVPLVQISAG--KAHSMALSMSG 178

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G     D P+++  L   +++    G SHT ++T DG    FG  
Sbjct: 179 NVYSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQVEFLACGGSHTALLTTDGLVFTFGAG 238

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  L  + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 239 KYGQLGHNSTQNELRPRLVTELAGNRVTQIACGRRHTLAYVSDLG-KVFSFGSGKEGQLG 297

Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
           + GT N+         S+ +L +E++   + +  +AG
Sbjct: 298 NGGTHNQLIPLPMKLPSNEELKFESRTSDKELVMIAG 334



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 81/180 (45%), Gaps = 20/180 (11%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCLV-SEVT 164
           L +  I +   G  H++ +++ G   A+G N HGQLG G +   I  P  V  L    + 
Sbjct: 103 LQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIPTPQAVEHLSGVPLV 162

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAI 223
             + G   ++ LS     ++ + G    GQLG G TD E                 P  I
Sbjct: 163 QISAGKAHSMALSM--SGNVYSWGRNDLGQLGLGHTDGE---------------DFPSLI 205

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L  + +  +ACG +HT  + + G V+T+G G YG+LGH   ++E  PR V     N V
Sbjct: 206 ETLDNQQVEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRV 265



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 16/189 (8%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           R    L  ++I+++ACG  H++A+   G ++ WG   +G+LG        +P    V   
Sbjct: 98  RFQCILQEKSIIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFAS-IPTPQAVEHL 156

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWN 332
           + V  P   ISAG  +S   +  G +Y WG+           +G+D  +P  +  L    
Sbjct: 157 SGV--PLVQISAGKAHSMALSMSGNVYSWGRNDLGQLGLGHTDGED--FPSLIETLDNQQ 212

Query: 333 LRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
           +  +  G  H   +  D    ++G  +YG+LG+     ++   P+ V  L G  V  +AC
Sbjct: 213 VEFLACGGSHTALLTTDGLVFTFGAGKYGQLGHN--STQNELRPRLVTELAGNRVTQIAC 270

Query: 392 GYGHSLVIV 400
           G  H+L  V
Sbjct: 271 GRRHTLAYV 279


>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 494

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 142/334 (42%), Gaps = 57/334 (17%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L GV    VA    S H +AV  +G  + WG N  GQLG G    R  P  V  
Sbjct: 191 PVQVQGLSGV----VAVAAGSAHSLAVRSDGTVWAWGANASGQLGDGTTTDRLVPVQVQG 246

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-- 164
           LS   +    AG  H++ V  DG    +G N   QLG GS+R  + P+ V+ L + V   
Sbjct: 247 LSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDSNQLGKGSMR-LLVPAQVQGLSAVVAVA 303

Query: 165 -----ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                + A G+D TVW            G    GQLG GT              Y   P 
Sbjct: 304 AGDTHSLAVGSDGTVWA----------VGSNNNGQLGDGTTT------------YRLVPV 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P     L+G  +V VA    H++AV S G V+ WG+   G+LG        VP +V    
Sbjct: 342 P----VLSG--VVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQV---- 391

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP--LMDLSGWNL 333
             + L     + AG  +S      G  + WG        +G     P P  +  LSG  +
Sbjct: 392 --SGLSEVVSVVAGGYHSLAVRSDGSAWDWGSNAYGQLGDGSTTYLPVPVRVQQLSG--V 447

Query: 334 RCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
             + SG+ H   + +D +  +WG+  +G+LG GP
Sbjct: 448 GAVASGSSHSLALRSDGTVWTWGYNSFGQLGNGP 481



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 144/340 (42%), Gaps = 39/340 (11%)

Query: 67  SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
           S H +A+  +G  + WG N  GQLG G       P  V      ++    AG SH++ V 
Sbjct: 5   SSHSLALRSDGTVWAWGANSSGQLGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVR 64

Query: 127 EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
            DG   A+G N  GQLG  +  +   P  V  L S V   A G+   + L      ++  
Sbjct: 65  SDGTVWAWGSNASGQLGDETTISRSTPVQVLGL-SGVLFVAAGSSHVLALR--YDGTVWA 121

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G    GQ G GT N          L  +AQ        L+G  ++ VA G NH++AV S
Sbjct: 122 WGSNSSGQRGDGTTNNR-------ALPVQAQ-------GLSG--VMAVAAGDNHSLAVRS 165

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            G  + WG    G+LG     +   P  V V   + V+     ++AGS +S      G +
Sbjct: 166 DGSAWAWGSNASGQLGEGTTSNR--PEPVQVQGLSGVV----AVAAGSAHSLAVRSDGTV 219

Query: 307 YMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
           + WG   +   GD    D + P  +  LSG  +  + +G+ H   V  D +   WG    
Sbjct: 220 WAWGANASGQLGDGTTTDRLVPVQVQGLSG--VVAVAAGHHHSLAVRNDGTVWGWGRNDS 277

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +LG    G     +P +V  L    V++VA G  HSL +
Sbjct: 278 NQLG---KGSMRLLVPAQVQGLSA--VVAVAAGDTHSLAV 312



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 100/227 (44%), Gaps = 27/227 (11%)

Query: 41  DGNLVSPTRLRPLVGVDIR----FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           D N +    +R LV   ++     VA      H +AV  +G  +  G N  GQLG G   
Sbjct: 276 DSNQLGKGSMRLLVPAQVQGLSAVVAVAAGDTHSLAVGSDGTVWAVGSNNNGQLGDGTTT 335

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
            R  P  V       +    A   H++ V  DG   A+G+N  GQLG G+    + P  V
Sbjct: 336 YRLVPVPVLS----GVVSVAANDYHSLAVRSDGTVWAWGYNSTGQLGDGTTTTRLVPVQV 391

Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
             L SEV +   G   +  L+     S  + G   YGQLG G+                 
Sbjct: 392 SGL-SEVVSVVAGGYHS--LAVRSDGSAWDWGSNAYGQLGDGSTTYL------------- 435

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            P P  +  L+G  +  VA G++H++A+ S G V+TWG+  +G+LG+
Sbjct: 436 -PVPVRVQQLSG--VGAVASGSSHSLALRSDGTVWTWGYNSFGQLGN 479


>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
          Length = 1677

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 467 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 526

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 527 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 586

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 587 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 638

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 639 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 692

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 693 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 725



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 516 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 561

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 562 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 619

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 677

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 678 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 492

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 610

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 611 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 664



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 645

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 646 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 689

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
               +   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 690 ----YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 745

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 746 LPGLDTKHIVGIACGPAQSFA 766


>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
            [Sus scrofa]
          Length = 2561

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 151/334 (45%), Gaps = 30/334 (8%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVS-CHCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 1654 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 1710

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 1711 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 1770

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
               +G+LG G+  N+  P  V  L   ++   ACG + T+ +S+ +G+ +   G   YG+
Sbjct: 1771 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQVACGLNHTLAVSA-DGSMVWAFGDGDYGK 1829

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            LG G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G
Sbjct: 1830 LGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFG 1875

Query: 255  FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                  L     ++   P+++ V     +      ++ G+ ++   A  G +Y WG    
Sbjct: 1876 QDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSE 1931

Query: 315  ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                  + +    P  +  L G N+R + +G  H
Sbjct: 1932 GQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 1965



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 77/331 (23%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 1606 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 1662

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 1663 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 1721

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 1722 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 1767

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV                                    
Sbjct: 1768 TFGNGDYGRLGLGNTSNKKLPERVTA---------------------------------- 1793

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                            L G+ +  +  G  H   V AD S + ++G   YG+LG G    
Sbjct: 1794 ----------------LEGYQIGQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTA 1837

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 1838 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 1866



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 1893 PQQIPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 1950

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 1951 LQGKNVRQISAGRCHSAAWT 1970


>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
 gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
           Japonica Group]
          Length = 1064

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 164/380 (43%), Gaps = 49/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           + + P  L   V +D++ +A  C S H      +G  +TWG    G+LGHG      RP 
Sbjct: 262 DFLIPKPLESDVVLDVQQIA--CGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPK 319

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  L+   ++    G  HT VVT  G+   +G   +  G LG G+  +   P  V   +
Sbjct: 320 LVESLAVSNVEYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPL 379

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG+    W S++  +S  +   G   +G LGHG D E         +AY  
Sbjct: 380 EGLQVLSVACGS----WHSALTMSSGKLFTFGDGTFGSLGHG-DRE--------SVAY-- 424

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVA-VDSKGY---------VYTWGFGGYGRLGHREQ 266
              P+ + AL+G   +KVACG  H+ A V+  G          ++TWG G   RLGH ++
Sbjct: 425 ---PKEVEALSGFRAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDK 481

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
           + + VP  V     +N       ++ G   +   A  G ++       G+L N   D   
Sbjct: 482 EAKLVPTCVQALVDHNF----HQVACGHSMTVALATSGHVFTMGSSNNGQLGNPKADGKQ 537

Query: 322 PKPLMDLSGWNLRCMDSGNMHHFVG--ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D  G  L    S   +H     + S   +WG    G LG+G    K    P  VD
Sbjct: 538 PCMVQDKLGNELVEEISCGSNHVAALTSRSEVYTWGMGANGRLGHGSVEDKKK--PTLVD 595

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S++CG   +  I
Sbjct: 596 ALKDRHVKSISCGSNFTTCI 615



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 85/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACG+ H      +G V+TWG    GRLGH    D   P+ V+   
Sbjct: 266 PKPLESDVVLDVQQIACGSRHIGLTTRQGEVFTWGEELGGRLGHGTDTDICRPKLVESLA 325

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            +NV      I+ G  ++      G LY WG    N            W+  +    L G
Sbjct: 326 VSNV----EYIACGEFHTCVVTASGDLYDWGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 381

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   ++S A PK+V+ L G   + V
Sbjct: 382 LQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHG--DRESVAYPKEVEALSGFRAMKV 439

Query: 390 ACGYGHSLVIVD 401
           ACG  HS  IV+
Sbjct: 440 ACGVWHSAAIVE 451


>gi|395543395|ref|XP_003773604.1| PREDICTED: secretion-regulating guanine nucleotide exchange factor
           [Sarcophilus harrisii]
          Length = 612

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/360 (28%), Positives = 144/360 (40%), Gaps = 68/360 (18%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            +WG N  GQLG G K     P  +++    K +K    G  H+ VVT++G     G NK
Sbjct: 192 LSWGANSYGQLGLGHKEDVLEPQRLNDFCDPKRLKLLTGGGGHSAVVTDEGELFVCGLNK 251

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            GQLG G   + +   P   L    V   +CG DFT+ L+  E   +L+ G   +GQLG 
Sbjct: 252 DGQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLT--ENGQVLSCGSNSFGQLG- 308

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                       +    + Q  P+ I  L  E +V +A G  H +A    G V+ WG  G
Sbjct: 309 ------------LPPGTKRQVIPQVI-ELLNEKVVCIAAGMRHALAATESGLVFQWGT-G 354

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKLK 313
               G R   ++ +P  +   +   V   E      + AGS +S+     G+LY+WG  K
Sbjct: 355 LASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGELYVWGSNK 414

Query: 314 NN---GDDWMYPKP-------------LMDLSGWNLRCMDSGNMHHFVGADSS--CISWG 355
           +          P P              M  SGW           H V    +    +WG
Sbjct: 415 HGQLLSPAAFLPTPQKIEAHCFQNEKVTMVWSGWT----------HLVARTETGKVFTWG 464

Query: 356 HAQYGELGYGPYGQKS---------------SAMPKKVDILEGMHVISVACGYGHSLVIV 400
            A YG+LG    GQ+                + MP  +  LEG  V  +ACG  H+L +V
Sbjct: 465 RADYGQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEHNLAVV 522



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 120/273 (43%), Gaps = 26/273 (9%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           + G++L CGS  +  +G   G      V P  +  L+   +  +AAG    H +A    G
Sbjct: 292 ENGQVLSCGSNSFGQLGLPPGT--KRQVIPQVIE-LLNEKVVCIAAGMR--HALAATESG 346

Query: 78  RCYTWGRN--ERGQLGHGDK-----IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
             + WG      G+    +K     +    P  V+ L   K+K   AG  H+  +T++G 
Sbjct: 347 LVFQWGTGLASTGRRTCPEKTLPPFLTAKEPCQVTGLENSKVKTVVAGSCHSASLTDEGE 406

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVR----CLVSEVTATACGADFTVWLSSVEGASILN 186
              +G NKHGQL S +      P+P +    C  +E   T   + +T  ++  E   +  
Sbjct: 407 LYVWGSNKHGQLLSPAA---FLPTPQKIEAHCFQNE-KVTMVWSGWTHLVARTETGKVFT 462

Query: 187 AGLPQYGQLGHGTD-NEYNTKDSSVKLA--YEAQPRPRAIAALAGETIVKVACGTNHTVA 243
            G   YGQLG   D  E  T D  + L+        P ++  L G  + ++ACG+ H +A
Sbjct: 463 WGRADYGQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEHNLA 520

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           V      Y+WG+  +G  G   + + WVP+ V+
Sbjct: 521 VVGSS-CYSWGWNEHGMCGDGTEVNVWVPKPVE 552



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 142/357 (39%), Gaps = 44/357 (12%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H   V  EG  +  G N+ GQLG G           + L+   + +   G   T+++TE+
Sbjct: 234 HSAVVTDEGELFVCGLNKDGQLGLGHTEDVLSFIPCTPLAGCPVLQVSCGWDFTILLTEN 293

Query: 129 GNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           G  L+ G N  GQLG     + ++ P  +  L  +V   A G      L++ E   +   
Sbjct: 294 GQVLSCGSNSFGQLGLPPGTKRQVIPQVIELLNEKVVCIAAGMRHA--LAATESGLVF-- 349

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
              Q+G  G  +       + ++     A+  P  +  L    +  V  G+ H+ ++  +
Sbjct: 350 ---QWGT-GLASTGRRTCPEKTLPPFLTAK-EPCQVTGLENSKVKTVVAGSCHSASLTDE 404

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDV--FQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           G +Y WG   +G+L          P++++   FQ   V     ++ +G  +       G+
Sbjct: 405 GELYVWGSNKHGQLLSPAAFLP-TPQKIEAHCFQNEKV----TMVWSGWTHLVARTETGK 459

Query: 306 LYMWGKL-------------KNNGDDWMY----------PKPLMDLSGWNLRCMDSGNMH 342
           ++ WG+              +  GD  +           P  L  L G  +  M  G+ H
Sbjct: 460 VFTWGRADYGQLGTKVDGQERCTGDHELLLSCTRTLATMPSSLPCLEG--VTEMACGSEH 517

Query: 343 HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +     SSC SWG  ++G  G G   + +  +PK V+       + V CG GHSL +
Sbjct: 518 NLAVVGSSCYSWGWNEHGMCGDG--TEVNVWVPKPVESPSLALCLLVGCGAGHSLAV 572


>gi|328791214|ref|XP_625074.3| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Apis
           mellifera]
          Length = 502

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 22/243 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +++ L G DI+  A G    H +A+  EG+ Y+WG+N   +LG+    Q   P I++ 
Sbjct: 67  PKKIKELCGKDIKTFAYG-KGPHVLALTEEGKVYSWGQNCHYELGNTFNNQALTPGIITN 125

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----E 162
           L    I     G  H++ +T DG   A+G N  GQ+G       ++  P +   +    +
Sbjct: 126 LCNEFIIDIACGSHHSLALTNDGEVYAWGQNTSGQVGCHDDTTLVQDIPRKLNFTLTGKK 185

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   +CG  F+V +++     + + G    GQLG   +N+              Q  P  
Sbjct: 186 VICISCGDSFSVVVTN--NGEVYSWGCNDVGQLGIENNND--------------QFHPCK 229

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRN 281
           I +LA   I KV CG+ HT+A+  +G +Y WG   YG+LG      + W P +++V +  
Sbjct: 230 ITSLAKIVIEKVVCGSIHTLALSDEGVLYVWGDNNYGQLGLTTVLLNIWKPTKLEVPEMR 289

Query: 282 NVL 284
            VL
Sbjct: 290 RVL 292



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 112/253 (44%), Gaps = 21/253 (8%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR- 119
           V  G +    + V  +   Y  G N  G LG GD      P  + EL    IK    G+ 
Sbjct: 27  VVYGNIGNEALIVTKDKMVYAVGSNTSGCLGIGDTQSTLYPKKIKELCGKDIKTFAYGKG 86

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
            H + +TE+G   ++G N H +LG+      + P  +  L +E +   ACG+  ++ L++
Sbjct: 87  PHVLALTEEGKVYSWGQNCHYELGNTFNNQALTPGIITNLCNEFIIDIACGSHHSLALTN 146

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACG 237
                +   G    GQ+G   D                Q  PR +   L G+ ++ ++CG
Sbjct: 147 --DGEVYAWGQNTSGQVGCHDDTTL------------VQDIPRKLNFTLTGKKVICISCG 192

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            + +V V + G VY+WG    G+LG     D++ P ++    +   +  E V+  GS+++
Sbjct: 193 DSFSVVVTNNGEVYSWGCNDVGQLGIENNNDQFHPCKITSLAK---IVIEKVV-CGSIHT 248

Query: 298 SCTAGGGQLYMWG 310
              +  G LY+WG
Sbjct: 249 LALSDEGVLYVWG 261


>gi|159037172|ref|YP_001536425.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916007|gb|ABV97434.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 560

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/234 (32%), Positives = 102/234 (43%), Gaps = 20/234 (8%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H +AV   G    WG N  GQLG G  I    P +VS  S         G  H++ VT  
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRTPVVVSLPSGVTATAVAGGDLHSLAVTSA 263

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNA 187
           G  LA+G N  GQLG G+  +   P  V     + VTA A G  F++ LSS    ++L  
Sbjct: 264 GAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTVTAVAAGIAFSLALSSA--GAVLAW 321

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    GQLG GT  + +T              P  +++ AG T+  +A G  H +AV S 
Sbjct: 322 GSNSSGQLGDGTTADRST--------------PVTVSSPAGTTVTAIAGGDAHGLAVTSV 367

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           G    WG   +G+LG     D   P  V +      L     I+AG+ +S   A
Sbjct: 368 GAAIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTL---TAIAAGAAHSVAVA 418



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 149/354 (42%), Gaps = 33/354 (9%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           GV +  VAAG    H +AV   G    WG N  GQLG G    R  P  V   +   +  
Sbjct: 88  GVTVTTVAAGA--AHNLAVTSAGTILAWGDNSSGQLGDGTTSNRHTPVAVGLPTGVTVTA 145

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADFT 173
             AG +H++ +T  G  LA+G N  GQLG G+  +   P+PV   L   VTATA  A   
Sbjct: 146 VAAGAAHSLALTSAGTVLAWGANTIGQLGDGTTID--SPAPVDVNLPPGVTATAVAAGAA 203

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             L+     ++L  G    GQLG GT     T              P  ++  +G T   
Sbjct: 204 HSLAVTSAGTVLAWGDNASGQLGEGTTIPSRT--------------PVVVSLPSGVTATA 249

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           VA G  H++AV S G V  WG    G+LG     D   P  V +     V      ++AG
Sbjct: 250 VAGGDLHSLAVTSAGAVLAWGSNSSGQLGDGTTADRSTPVAVSLSGGTTV----TAVAAG 305

Query: 294 SVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
              S   +  G +  WG   +   GD    D   P  +   +G  +  +  G+ H   V 
Sbjct: 306 IAFSLALSSAGAVLAWGSNSSGQLGDGTTADRSTPVTVSSPAGTTVTAIAGGDAHGLAVT 365

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS-VACGYGHSLVI 399
           +  + I+WG+  +G+LG G    +    P  V +  G   ++ +A G  HS+ +
Sbjct: 366 SVGAAIAWGNNSFGQLGDGTNTDR--VTPVAVSLPVGTTTLTAIAAGAAHSVAV 417



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 68/145 (46%), Gaps = 7/145 (4%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G  +  VAAG      +A+   G    WG N  GQLG G    R  P  VS  +   +  
Sbjct: 296 GTTVTAVAAGI--AFSLALSSAGAVLAWGSNSSGQLGDGTTADRSTPVTVSSPAGTTVTA 353

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADF 172
              G +H + VT  G ++A+G N  GQLG G+  + + P  V   V  + +TA A GA  
Sbjct: 354 IAGGDAHGLAVTSVGAAIAWGNNSFGQLGDGTNTDRVTPVAVSLPVGTTTLTAIAAGAAH 413

Query: 173 TVWLSSVEGASI---LNAGLPQYGQ 194
           +V +++   +S+   +    P+ GQ
Sbjct: 414 SVAVAAPPTSSVTLRVTPSDPEVGQ 438


>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 671

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 151/324 (46%), Gaps = 40/324 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP +++ L G  I  ++AG    H VA+  +G  +TWG    G+LG G    R  P  ++
Sbjct: 77  SPVQVKGLNG--ITAISAGW--AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPIN 132

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L+   I    AG +HT+ +  DG   ++G N++GQLG+G+  N   P  V   +  +T+
Sbjct: 133 GLTG--ITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIG-ITS 189

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            + G   ++ +      ++ + G   +GQLG+GT++                P P  I+ 
Sbjct: 190 ISSGGGHSLVIK--NDGTVWSWGCNNFGQLGNGTNSN--------------NPTPHQISG 233

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L G  I+ V+ G  H+ A+ S G V+ WG    G L +  + D ++P +       N L 
Sbjct: 234 LNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQA------NGLN 285

Query: 286 PEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSG 339
               I+AG   SS     G  ++W     G+L N +  D   P  +  LSG  +  +D+G
Sbjct: 286 GIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSG--ITAIDTG 343

Query: 340 NMHHF-VGADSSCISWGHAQYGEL 362
             +   +  D +  ++G   YG+L
Sbjct: 344 ATYTVALKTDGNIFAFGENTYGQL 367



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           ++A    +   +A+  +G  ++WG N+ G LG G     + P  V  L+   I    AG 
Sbjct: 37  YIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLN--GITAISAGW 94

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
           +H V +  DG    +G    G+LG G+      P+P+  L + +TA + G + T+ L + 
Sbjct: 95  AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGL-TGITAISAGWNHTLALKA- 152

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
              ++ + G  QYGQLG G     NT +S++ L    Q             I  ++ G  
Sbjct: 153 -DGTLWSWGQNQYGQLGTG-----NTTNSNIPLQVPGQIG-----------ITSISSGGG 195

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H++ + + G V++WG   +G+LG+    +   P ++     N ++     +SAG ++S+ 
Sbjct: 196 HSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGL--NGIIN----VSAGVIHSTA 249

Query: 300 TAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCI 352
               G ++ W     G+L N N  D   P     L+G  +  + +G      + +D +  
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNG--IIAITAGWEFSSAIKSDGTFW 307

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            WG   YG+LG G     +S  P +V  L G+  I     Y  +L
Sbjct: 308 VWGVNDYGQLGNGSKSDVTS--PMQVSSLSGITAIDTGATYTVAL 350



 Score = 69.3 bits (168), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 42/292 (14%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AG + T+ +  DG   ++G+N++G LG G+  N   P  V+ L + +TA + G    V L
Sbjct: 42  AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL-NGITAISAGWAHFVAL 100

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            S    ++   G+   G+LG GT++   T              P  I  L G  I  ++ 
Sbjct: 101 KS--DGTVWTWGVGYSGELGDGTNSLRTT--------------PAPINGLTG--ITAISA 142

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPE---AVISAG 293
           G NHT+A+ + G +++WG   YG+LG     +  +P +V         P +     IS+G
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV---------PGQIGITSISSG 193

Query: 294 SVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHF-VGA 347
             +S      G ++ WG        NG +   P P   +SG N +  + +G +H   + +
Sbjct: 194 GGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTP-HQISGLNGIINVSAGVIHSTALKS 252

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           D +  +WG    GEL  G   +  S +P + + L G  +I++  G+  S  I
Sbjct: 253 DGTVWNWGCNFRGELANG--NKIDSYIPVQANGLNG--IIAITAGWEFSSAI 300



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 19/175 (10%)

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           + V+ G   T+A+ + G V++WGF   G LG     +   P  V V   N +      IS
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGI----TAIS 91

Query: 292 AGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF- 344
           AG  +       G ++ W     G+L +  +     P P+  L+G  +  + +G  H   
Sbjct: 92  AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLA 149

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           + AD +  SWG  QYG+LG G     +S +P +V    G  + S++ G GHSLVI
Sbjct: 150 LKADGTLWSWGQNQYGQLGTG--NTTNSNIPLQVPGQIG--ITSISSGGGHSLVI 200


>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
          Length = 1009

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 21/217 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P IV  LS   + +  AG 
Sbjct: 125 IQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLVQISAGE 184

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G   N+  PS +  L  + V   ACG   T  L+ 
Sbjct: 185 AHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLT- 243

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +   +   G  +YGQLGH  T NE                RPR +  L G  + ++ACG
Sbjct: 244 -KSGLVFTFGDGKYGQLGHNSTQNEL---------------RPRLVTGLVGNRVTQIACG 287

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
             HT+A V   G V+++G G  G+LG+   +++ +PR
Sbjct: 288 RQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIPR 324



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 94/182 (51%), Gaps = 6/182 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G +  +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 139 KGGELFAWGQNLDGQLG--VGRIFASTSTPEIVENLSGVPLVQISAG--EAHSMALSMSG 194

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G    +D P+ +  L   K++    G  HT ++T+ G    FG  
Sbjct: 195 NVYSWGRNDCGQLGLGHTYNKDSPSCIETLDDQKVEFLACGGCHTALLTKSGLVFTFGDG 254

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  LV + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 255 KYGQLGHNSTQNELRPRLVTGLVGNRVTQIACGRQHTLAYVSDTG-KVFSFGSGKEGQLG 313

Query: 197 HG 198
           +G
Sbjct: 314 NG 315



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 14/169 (8%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N  GQLG G I        +   +S V   
Sbjct: 119 LQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVENLSGVPLV 178

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A     ++     ++ + G    GQLG G  + YN KDS           P  I  L
Sbjct: 179 QISAGEAHSMALSMSGNVYSWGRNDCGQLGLG--HTYN-KDS-----------PSCIETL 224

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
             + +  +ACG  HT  +   G V+T+G G YG+LGH   ++E  PR V
Sbjct: 225 DDQKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHNSTQNELRPRLV 273



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/194 (26%), Positives = 81/194 (41%), Gaps = 20/194 (10%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R    L  + I+++ CG  H++A+   G ++ WG    G+LG  R       P  V+   
Sbjct: 114 RFQCILQEKNIIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRIFASTSTPEIVE--- 170

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK---------LKNNGDDWMYPKPLMDLSG 330
            N    P   ISAG  +S   +  G +Y WG+            N D    P  +  L  
Sbjct: 171 -NLSGVPLVQISAGEAHSMALSMSGNVYSWGRNDCGQLGLGHTYNKDS---PSCIETLDD 226

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H  +   S  + ++G  +YG+LG+     ++   P+ V  L G  V  +
Sbjct: 227 QKVEFLACGGCHTALLTKSGLVFTFGDGKYGQLGHN--STQNELRPRLVTGLVGNRVTQI 284

Query: 390 ACGYGHSLVIVDRT 403
           ACG  H+L  V  T
Sbjct: 285 ACGRQHTLAYVSDT 298


>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
          Length = 1344

 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 76/280 (27%), Positives = 126/280 (45%), Gaps = 40/280 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIV 104
           P   +P+  V        C S H +A+  +   ++WG  + G LG G  D I   R  I+
Sbjct: 285 PKHTKPITQV-------ACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLII 337

Query: 105 SELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
            +    Y I+    G+ H++ +T     L +G  + G+LG G   + + P  +  L  + 
Sbjct: 338 EKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKK 397

Query: 164 TA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
               + G   +  +S  E  ++   G   YG+LGHG D               ++ +P+ 
Sbjct: 398 PIFISAGESHSAAIS--EKLNLYTWGTGTYGRLGHGMDT--------------SEKKPKL 441

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV---PRRVDVFQ 279
           I  L    I+ V+CG  HT+A+  +G VY +G G YG+LG   ++ E V   P ++  F 
Sbjct: 442 IEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKIS-FY 500

Query: 280 RNNVLPPEAVI---------SAGSVNSSCTAGGGQLYMWG 310
           +  V P E ++         +AG  +S C A  G++Y WG
Sbjct: 501 KVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWG 540



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 86/390 (22%), Positives = 161/390 (41%), Gaps = 57/390 (14%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTV 123
            C   H + +  + +  TWG+ + G+LGHGD+     P  + +LSK K     AG SH+ 
Sbjct: 350 ACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKKKPIFISAGESHSA 409

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGA 182
            ++E  N   +G   +G+LG G   +E +P  +  L   E+   +CGA  T+ ++     
Sbjct: 410 AISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITG--QG 467

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLA-YEAQPRPRAIAALAGETIVKVACGTNHT 241
           ++   G  +YG+LG              K++ Y+    P+ +        +  A G NH+
Sbjct: 468 TVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHS 527

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV---------------DVFQRNNVLPP 286
           + +   G +Y+WG+ G G LG ++  +E +P  +               ++ QR ++   
Sbjct: 528 LCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQE 587

Query: 287 EAV------ISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDWMYPK------------ 323
           E        ++ G +N+     GG++Y+     +G+L  + D   + K            
Sbjct: 588 ETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNNDN 647

Query: 324 ----------PLMDLSGWN---LRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
                      L+   G     +  +  G  H F +   +    WG    G+LG G +  
Sbjct: 648 SQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLG-FVS 706

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +A P  +  +   ++  +ACG  +S  +
Sbjct: 707 DFTAEPTLIRQIAHKNIQMIACGDNYSAAV 736



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 11/195 (5%)

Query: 219 RPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           RP AI      + I +VACG+ H +A+     +++WG G YG LG   + D + PR + +
Sbjct: 278 RPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEPRHLII 337

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGW 331
            +++     E  I+ G  +S C     ++  WG+ +       + DD + PK + DLS  
Sbjct: 338 EKKDYTYFIEG-IACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKK 396

Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
               + +G  H    ++  +  +WG   YG LG+G     S   PK ++ L+   +I V+
Sbjct: 397 KPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGM--DTSEKKPKLIEDLDQYEIIHVS 454

Query: 391 CGYGHSLVIVDRTNV 405
           CG  H+L I  +  V
Sbjct: 455 CGAFHTLAITGQGTV 469



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 31/222 (13%)

Query: 100 RPTIVSELSKYK-IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
           RPT +      K I +   G +H + +TED    ++G  ++G LG G+  +  EP   R 
Sbjct: 278 RPTAIKFPKHTKPITQVACGSAHILAITEDSELFSWGSGQYGALGFGTRDDIFEP---RH 334

Query: 159 LVSE-------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
           L+ E       +   ACG   ++ L+  +   IL  G  Q G+LGHG +++         
Sbjct: 335 LIIEKKDYTYFIEGIACGKYHSMCLTRKK--KILTWGQGQGGRLGHGDEDDVLV------ 386

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
                   P+ I  L+ +  + ++ G +H+ A+  K  +YTWG G YGRLGH     E  
Sbjct: 387 --------PKEIYDLSKKKPIFISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKK 438

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           P+ ++   +  ++     +S G+ ++    G G +Y +G+ K
Sbjct: 439 PKLIEDLDQYEIIH----VSCGAFHTLAITGQGTVYAFGQGK 476



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 101/426 (23%), Positives = 173/426 (40%), Gaps = 66/426 (15%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           GR     + +++ P  +  L      F++AG    H  A+  +   YTWG    G+LGHG
Sbjct: 374 GRLGHGDEDDVLVPKEIYDLSKKKPIFISAG--ESHSAAISEKLNLYTWGTGTYGRLGHG 431

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE--- 150
                 +P ++ +L +Y+I     G  HT+ +T  G   AFG  K+G+LG    + E   
Sbjct: 432 MDTSEKKPKLIEDLDQYEIIHVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVF 491

Query: 151 ----------IEPSPVRCLV---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
                     +   P   LV   +E    A G + ++ L+  +   I + G    G LG 
Sbjct: 492 SRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLA--KSGKIYSWGYNGKGLLGR 549

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAAL-------AGET----IVKVACGTNHTVAVDS 246
               E +      ++  E   +   I  L         ET    +++VACG  +TV++ +
Sbjct: 550 QKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQVACGVLNTVSLTN 609

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVPRR---------------VDVFQRNNVL--PPEAV 289
            G VY +G   YG+L   + KD+   R+               +D  ++ +++  P E  
Sbjct: 610 GGEVYVFGSNAYGQLA--KDKDQTTFRKYKKQDQNNNNDNSQALDSSEQMSLIKFPGETT 667

Query: 290 -----ISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMD 337
                I+ G  +    +   +L+ WG+       L    D    P  +  ++  N++ + 
Sbjct: 668 VRINYIACGGEHIFAISRMNELFGWGRNDEGQLGLGFVSDFTAEPTLIRQIAHKNIQMIA 727

Query: 338 SG-NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI-SVACGYGH 395
            G N    V A       G+ + G+LG G   +K   +     +++ +  I SVACG  H
Sbjct: 728 CGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLL--SFTLIQNLAPIKSVACGPNH 785

Query: 396 SLVIVD 401
            L I D
Sbjct: 786 MLAIAD 791



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 67/259 (25%), Positives = 114/259 (44%), Gaps = 41/259 (15%)

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +T  ACG+     L+  E + + + G  QYG LG GT ++              +PR   
Sbjct: 291 ITQVACGSAHI--LAITEDSELFSWGSGQYGALGFGTRDDI------------FEPRHLI 336

Query: 223 IAALAGETIVK-VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV-DVFQR 280
           I        ++ +ACG  H++ +  K  + TWG G  GRLGH ++ D  VP+ + D+ ++
Sbjct: 337 IEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQGGRLGHGDEDDVLVPKEIYDLSKK 396

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLR 334
             +      ISAG  +S+  +    LY W     G+L +  D     PK + DL  + + 
Sbjct: 397 KPIF-----ISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKKPKLIEDLDQYEII 451

Query: 335 CMDSGNMHHF-VGADSSCISWGHAQYGELGY------GPYGQ-------KSSAMPKKVDI 380
            +  G  H   +    +  ++G  +YG+LG       G + +       K    P+++ +
Sbjct: 452 HVSCGAFHTLAITGQGTVYAFGQGKYGKLGINRKQREGVFSRPEKISFYKVGVEPQEMLV 511

Query: 381 LEGMHVISVACGYGHSLVI 399
            +    I  A GY HSL +
Sbjct: 512 QDKNEAILAAAGYNHSLCL 530



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 76/335 (22%), Positives = 135/335 (40%), Gaps = 54/335 (16%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---RPTIVSELSKYKI 112
           V I ++A  C   H  A+      + WGRN+ GQLG G     D    PT++ +++   I
Sbjct: 668 VRINYIA--CGGEHIFAISRMNELFGWGRNDEGQLGLG--FVSDFTAEPTLIRQIAHKNI 723

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE---IEPSPVRCLVSEVTATACG 169
           +    G +++  V+  G     G  ++G+LG G    +   +  + ++ L + + + ACG
Sbjct: 724 QMIACGDNYSAAVSAFGELFVTGNLENGKLGLGQALKKGFLLSFTLIQNL-APIKSVACG 782

Query: 170 ADFTVWLSS------VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            +  + ++       ++     + G    GQLG G+  + N               P+ I
Sbjct: 783 PNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNV--------------PKKI 828

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
              A E   KVACG + ++ +     VY WG   Y         D  + + VD+ Q    
Sbjct: 829 HN-AKERFKKVACGQDFSIGLTYGNQVYLWGNNKYF-------CDSKITKDVDIPQLLQA 880

Query: 284 LPPEAVISAGSVNSSCTA--GGGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCM 336
           L    +         C+     G++ +WG     ++K N       +  + ++ + +R  
Sbjct: 881 LEQAQIKDIACSYKFCSVLNDKGEILIWGSYLTDRIKQNQKKDKKSQNHLAITKFPMRKF 940

Query: 337 D------SGNMHH--FVGADSSCISWGHAQYGELG 363
           D      S   +H   V    S  +WGHA+ G LG
Sbjct: 941 DFLMETISAGQNHSAAVSVKRSLYTWGHAEGGRLG 975



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 71/258 (27%), Positives = 112/258 (43%), Gaps = 27/258 (10%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD----- 74
           GEL   G+     +G  +    G L+S T ++ L  +     +  C   H +A+      
Sbjct: 740 GELFVTGNLENGKLGLGQALKKGFLLSFTLIQNLAPIK----SVACGPNHMLAIADYNPD 795

Query: 75  ---VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
               +G CY+WGRN +GQLG G K   + P  +   +K + KK   G+  ++ +T     
Sbjct: 796 HPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKIHN-AKERFKKVACGQDFSIGLTYGNQV 854

Query: 132 LAFGWNKHGQLGSGSIRNEIE-PSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGL 189
             +G NK+       I  +++ P  ++ L  +++   AC   F   L+  +   IL  G 
Sbjct: 855 YLWGNNKY--FCDSKITKDVDIPQLLQALEQAQIKDIACSYKFCSVLN--DKGEILIWGS 910

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
               ++     N+   K S   LA    P  R    L  ETI   + G NH+ AV  K  
Sbjct: 911 YLTDRI---KQNQKKDKKSQNHLAITKFPM-RKFDFLM-ETI---SAGQNHSAAVSVKRS 962

Query: 250 VYTWGFGGYGRLGHREQK 267
           +YTWG    GRLG  E++
Sbjct: 963 LYTWGHAEGGRLGLNEKE 980



 Score = 47.8 bits (112), Expect = 0.010,   Method: Composition-based stats.
 Identities = 75/379 (19%), Positives = 131/379 (34%), Gaps = 108/379 (28%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS-------------------- 108
           H + +   G+ Y+WG N +G LG     +   P  + ++                     
Sbjct: 526 HSLCLAKSGKIYSWGYNGKGLLGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLK 585

Query: 109 -----KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS----------------- 146
                 Y++ +   G  +TV +T  G    FG N +GQL                     
Sbjct: 586 QEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQNNNN 645

Query: 147 -IRNEIEPSPVRCLVS-------EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
                ++ S    L+         +   ACG +    +S +    +   G    GQLG G
Sbjct: 646 DNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMN--ELFGWGRNDEGQLGLG 703

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
             +++  +             P  I  +A + I  +ACG N++ AV + G ++  G    
Sbjct: 704 FVSDFTAE-------------PTLIRQIAHKNIQMIACGDNYSAAVSAFGELFVTGNLEN 750

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
           G+LG  +   +       + Q  N+ P ++V        +C                   
Sbjct: 751 GKLGLGQALKKGFLLSFTLIQ--NLAPIKSV--------ACG------------------ 782

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
              P  ++ ++ +        N  H +  D  C SWG    G+LG G   ++ S +PKK+
Sbjct: 783 ---PNHMLAIADY--------NPDHPI-KDGMCYSWGRNWKGQLGIG--SKEDSNVPKKI 828

Query: 379 DILEGMHVISVACGYGHSL 397
              +      VACG   S+
Sbjct: 829 HNAK-ERFKKVACGQDFSI 846


>gi|168035990|ref|XP_001770491.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678199|gb|EDQ64660.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1102

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 157/381 (41%), Gaps = 53/381 (13%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           GA++ +   P  L   + +D+++VA  C   H   V  +G  +TWG    G+LGHG    
Sbjct: 291 GAMNLDAPLPKALESAIVLDVQYVA--CGGKHAALVTKQGEVFTWGEESGGRLGHGVDCD 348

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSP 155
              P +V  L+    +    G  H   VT  G+   +G   H  G LG G+  +   P  
Sbjct: 349 VSHPQLVEALASSTTEVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKR 408

Query: 156 VRCLVSE--VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
           V   + E  V + ACG   T  +++     +   G   +G LGH      N + S    A
Sbjct: 409 VNGPLEEVRVASIACGPWHTAVVTTA--GQLFTFGDGTFGVLGH------NDRQS----A 456

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRL 261
           Y     PR + +L G   V+ ACG  HT AV             S G ++TWG G  GRL
Sbjct: 457 YS----PREVESLKGLRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRL 512

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNNGD 317
           GH +++   VP  V     +N      V    S+  + T  G        M+G+L +   
Sbjct: 513 GHGDKEQRLVPTCVAALVDHNF---RKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQA 569

Query: 318 DWMYP----KPLMDLSGWNLRCMDSGNMHHF--VGADSSCISWGHAQYGELGYGPYGQKS 371
           D   P      L+D    ++ C      HH   V   S   +WG    G LG+G   Q+ 
Sbjct: 570 DGKLPGMVEGRLVDAYVEDIAC----GAHHVACVTLKSEVYTWGKGANGRLGHG--DQED 623

Query: 372 SAMPKKVDILEGMHVISVACG 392
              P  V+ L+   V S+ACG
Sbjct: 624 RNTPTLVEALKEKQVKSIACG 644



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 91/215 (42%), Gaps = 37/215 (17%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQLGHG 93
           SP  +  L G  +R V A C   H  AV               G+ +TWG  ++G+LGHG
Sbjct: 458 SPREVESLKG--LRTVRAACGVWHTAAVVEVMVGSSSASSCSSGKLFTWGDGDKGRLGHG 515

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG----SGSIRN 149
           DK QR  PT V+ L  +  +K   G S TV +T  G     G +  GQLG     G +  
Sbjct: 516 DKEQRLVPTCVAALVDHNFRKVACGHSLTVALTTKGEVFTMGSSMFGQLGDPQADGKLPG 575

Query: 150 EIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            +E   V   V ++   ACGA     ++    + +   G    G+LGHG   + NT    
Sbjct: 576 MVEGRLVDAYVEDI---ACGAHHVACVTL--KSEVYTWGKGANGRLGHGDQEDRNT---- 626

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
                     P  + AL  + +  +ACG   T AV
Sbjct: 627 ----------PTLVEALKEKQVKSIACGATFTAAV 651



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 22/197 (11%)

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P P+A+ +     +  VACG  H   V  +G V+TWG    GRLGH    D   P+ V+ 
Sbjct: 298 PLPKALESAIVLDVQYVACGGKHAALVTKQGEVFTWGEESGGRLGHGVDCDVSHPQLVEA 357

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDDWMY--PK----PL 325
              +       V++ G  +       G LY WG       L  +G+D  +  PK    PL
Sbjct: 358 LASSTT----EVVACGEYHGCAVTLSGDLYTWGDGTHSLGLLGHGNDISHWIPKRVNGPL 413

Query: 326 MDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
            ++   ++ C   G  H   V       ++G   +G LG+    ++S+  P++V+ L+G+
Sbjct: 414 EEVRVASIAC---GPWHTAVVTTAGQLFTFGDGTFGVLGHN--DRQSAYSPREVESLKGL 468

Query: 385 HVISVACGYGHSLVIVD 401
             +  ACG  H+  +V+
Sbjct: 469 RTVRAACGVWHTAAVVE 485


>gi|260791114|ref|XP_002590585.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
 gi|229275780|gb|EEN46596.1| hypothetical protein BRAFLDRAFT_123620 [Branchiostoma floridae]
          Length = 710

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 134/343 (39%), Gaps = 65/343 (18%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R  A  C   H   V   GR YT+G N+ GQLG G      +P+ V  L   K K    G
Sbjct: 36  RICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKAKLVACG 95

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
           RSHT++ T DG    +G    GQLG G    E     +    S+  + +CG   T  ++ 
Sbjct: 96  RSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAISVSCGYYHTAVVT- 154

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
            E  ++   G  +YG+LG       N  D       ++   P+ +  +  E +  V CG 
Sbjct: 155 -EDGNLYTFGETEYGKLG------LNNSD------LDSSDTPQKVTGIK-EKVKFVVCGG 200

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            HT A+   G VYT+G G  G+LGH     +   P RV+ F+            A   ++
Sbjct: 201 GHTTAIAESGAVYTFGNGASGQLGHGNSLLESPTPHRVERFR-----------DADCKHA 249

Query: 298 SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHA 357
           SC                              G N   + +G  H +        ++G  
Sbjct: 250 SC------------------------------GENFTAVITGKGHLY--------TFGDG 271

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           ++G+LG G     +   P KV       V  VACG  H +VI 
Sbjct: 272 RHGKLGLGDESFTNQFRPFKVARFNKFQVQWVACGGCHMMVIA 314



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 106/242 (43%), Gaps = 24/242 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVS 105
           P+ ++ L     + VA  C   H +    +G+ Y WG    GQLG G D  +   PT++ 
Sbjct: 78  PSCVKSLKHEKAKLVA--CGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLD 135

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG--SGSIRNEIEPSPVRCLVSEV 163
             SK        G  HT VVTEDGN   FG  ++G+LG  +  + +   P  V  +  +V
Sbjct: 136 FDSK--AISVSCGYYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIKEKV 193

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
               CG   T  ++  E  ++   G    GQLGHG              +    P P  +
Sbjct: 194 KFVVCGGGHTTAIA--ESGAVYTFGNGASGQLGHGN-------------SLLESPTPHRV 238

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRN 281
                      +CG N T  +  KG++YT+G G +G+LG  ++   +++ P +V  F + 
Sbjct: 239 ERFRDADCKHASCGENFTAVITGKGHLYTFGDGRHGKLGLGDESFTNQFRPFKVARFNKF 298

Query: 282 NV 283
            V
Sbjct: 299 QV 300



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 13/183 (7%)

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           +  + I  VACG  HT  V   G +YT+G   +G+LG    K    P  V   +      
Sbjct: 32  IRNDRICAVACGDEHTALVTENGRLYTFGSNDWGQLGLGHTKTASKPSCVKSLKHEKA-- 89

Query: 286 PEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMYPKP-LMDLSGWNLRCMDSG 339
              +++ G  ++    G G++Y+W     G+L    D     +P L+D     +  +  G
Sbjct: 90  --KLVACGRSHTLIATGDGKVYVWGGGSEGQLGLGEDTTECTEPTLLDFDSKAI-SVSCG 146

Query: 340 NMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H   V  D +  ++G  +YG+LG       SS  P+KV  ++   V  V CG GH+  
Sbjct: 147 YYHTAVVTEDGNLYTFGETEYGKLGLNNSDLDSSDTPQKVTGIK-EKVKFVVCGGGHTTA 205

Query: 399 IVD 401
           I +
Sbjct: 206 IAE 208


>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
 gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
          Length = 1086

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 152/376 (40%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG      +P ++  
Sbjct: 301 PKPLEFAVKLDVQNIS--CGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDA 358

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           L+   I+    G  HT  VT  G+   +  G +  G LG G+  +   P  V   +    
Sbjct: 359 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+A +CG   T  ++S     +   G   +G LGHG     +               PR 
Sbjct: 419 VSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV--------------PRE 462

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH ++    
Sbjct: 463 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 522

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    I+ G   +      G +Y     ++G+L N   D M P  +
Sbjct: 523 VPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRV 578

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G    +SS  P  V+ L+ 
Sbjct: 579 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PTLVEALKD 636

Query: 384 MHVISVACGYGHSLVI 399
             V +V CG   +  I
Sbjct: 637 KQVRTVVCGINFTAAI 652



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +       +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D   
Sbjct: 301 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 360

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG   +N            W+  +    L G
Sbjct: 361 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 416

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   V +     ++G   +G LG+G   ++S ++P++V+ L+G+  +  
Sbjct: 417 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 474

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 475 ACGVWHTAAVVE 486



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 92/218 (42%), Gaps = 37/218 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQL 90
           +L  P  +  L G  +R V A C   H  AV               G+ +TWG  ++G+L
Sbjct: 456 SLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRL 513

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GS 146
           GHGDK  R  PT V+ L +    +   G   TV +T  G+    G   +GQLG+    G 
Sbjct: 514 GHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM 573

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   +E    +  V E++   CGA     L+S     +   G    G+LGHG     +T 
Sbjct: 574 LPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHG-----DTD 623

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           D S          P  + AL  + +  V CG N T A+
Sbjct: 624 DRS---------SPTLVEALKDKQVRTVVCGINFTAAI 652


>gi|134025900|gb|AAI34575.1| RPGR protein [Bos taurus]
          Length = 620

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 126/276 (45%), Gaps = 27/276 (9%)

Query: 11  EEETGKEKGGELLFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCH 69
           +E T    G   LF  GS  W  +G    A    +  PT ++ L    ++FVA  C   H
Sbjct: 89  DEHTAITTGNNKLFMFGSNNWGQLGLGSKA---TVNKPTCIKALKPEKVKFVA--CGRNH 143

Query: 70  CVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKAGAGRSHTVVVTED 128
            + +   G+ Y  G N  GQLG GD  +R    ++S   S++KIK+  AG + +  +T +
Sbjct: 144 TLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKIKQLSAGSNTSAALTAE 203

Query: 129 GNSLAFGWNKHGQLG--SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILN 186
           G    FG  + G+LG     + N   P  V  +  +V   ACG   TV L+     ++  
Sbjct: 204 GELYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTE---KAVYT 260

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            GL Q+GQLG GT              +E    P+ I ++  + I  V CG NHT  +  
Sbjct: 261 FGLGQFGQLGLGT------------FTFETS-EPKVIESVKDKKISHVCCGENHTALITE 307

Query: 247 KGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQR 280
            G +YT+G G +G+  LG     +++VP     F +
Sbjct: 308 SGLLYTFGDGRHGKLGLGMENFTNQFVPTLCSSFLK 343



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 107/243 (44%), Gaps = 29/243 (11%)

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           +CG + T   +      +   G   +GQLG G+    N              +P  I AL
Sbjct: 86  SCGDEHTAITTG--NNKLFMFGSNNWGQLGLGSKATVN--------------KPTCIKAL 129

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             E +  VACG NHT+ +   G VY  G    G+LG  +  +      +  F   + +  
Sbjct: 130 KPEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQHKI-- 187

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD------LSGWNLRCMD--S 338
              +SAGS  S+     G+LY +G+   +G   + PK L++      + G + + +    
Sbjct: 188 -KQLSAGSNTSAALTAEGELYTFGE-PESGKLGLPPKLLVNHKVPQLVPGISEKVIQVAC 245

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
           G  H  V  + +  ++G  Q+G+LG G +  ++S  PK ++ ++   +  V CG  H+ +
Sbjct: 246 GGGHTVVLTEKAVYTFGLGQFGQLGLGTFTFETSE-PKVIESVKDKKISHVCCGENHTAL 304

Query: 399 IVD 401
           I +
Sbjct: 305 ITE 307



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 14/153 (9%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVSELSKYKIK 113
           G+  + +   C   H V +  E   YT+G  + GQLG G    +   P ++  +   KI 
Sbjct: 235 GISEKVIQVACGGGHTVVL-TEKAVYTFGLGQFGQLGLGTFTFETSEPKVIESVKDKKIS 293

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA--D 171
               G +HT ++TE G    FG  +HG+LG G          +    ++   T C +   
Sbjct: 294 HVCCGENHTALITESGLLYTFGDGRHGKLGLG----------MENFTNQFVPTLCSSFLK 343

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           + V L +  G  +L    P+ G       +E N
Sbjct: 344 YIVHLVACGGCHMLVFATPRLGMAEDIESDEIN 376


>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 382

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/332 (28%), Positives = 144/332 (43%), Gaps = 40/332 (12%)

Query: 52  PLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           P+ G+ DI  VAAG    H +AV  +G  +TWG N  GQLG G    R  P  V+ LS  
Sbjct: 77  PVPGLSDIVSVAAG--GAHSLAVRADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSGV 134

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           +    G G  H++ +  DG   A+G N+ GQLG G+    + P P+  L S V + A G 
Sbjct: 135 RAVATGLG--HSLALRADGTVWAWGLNQFGQLGDGTTSQWLTPRPIPGL-SGVRSVAAGG 191

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ +   +  ++   G   YG+LG G+ +                  PRAI  L    
Sbjct: 192 FHSLVVRDDD--TVWAWGSNDYGELGDGSTSRRAV--------------PRAIPGL--RN 233

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +  VA G  H++AV + G +  WG   YG+LG     +   PR V              +
Sbjct: 234 VASVAGGCYHSLAVHADGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLSGVR------CV 287

Query: 291 SAGSVNSSCTAGGGQLYMWG--KLKNNGDDWM-----YPKPLMDLSGWNLRCMDSGNMHH 343
           +    +S      G ++ WG       GD         P+P+  LSG  +  + +G  H 
Sbjct: 288 ATSFFHSLALRAEGTVWAWGLNGYGEQGDGTASRQSPTPRPVPGLSG--VLSVATGTFHS 345

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAM 374
             V  + +  +WGH   G+LG G    +S+ +
Sbjct: 346 LAVNTNGTVSAWGHNGQGQLGDGTATHRSTPV 377



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 135/338 (39%), Gaps = 83/338 (24%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACG------- 169
           AG SH++ V  DG+  A+G +  G    G++     P PV  L   V+  A G       
Sbjct: 39  AGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVPVPGLSDIVSVAAGGAHSLAVR 98

Query: 170 ADFTVW--------------------------LSSVEG--------------ASILNAGL 189
           AD T+W                          LS V                 ++   GL
Sbjct: 99  ADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSGVRAVATGLGHSLALRADGTVWAWGL 158

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
            Q+GQLG GT +++ T              PR I  L+G  +  VA G  H++ V     
Sbjct: 159 NQFGQLGDGTTSQWLT--------------PRPIPGLSG--VRSVAAGGFHSLVVRDDDT 202

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V+ WG   YG LG        VPR +   +  NV    A ++ G  +S      G L  W
Sbjct: 203 VWAWGSNDYGELGDGSTSRRAVPRAIPGLR--NV----ASVAGGCYHSLAVHADGTLSAW 256

Query: 310 GKLKNNG-------DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGE 361
           G L + G        +   P+P+  LSG  +RC+ +   H   + A+ +  +WG   YGE
Sbjct: 257 G-LNSYGQLGDGTFSNRATPRPVPGLSG--VRCVATSFFHSLALRAEGTVWAWGLNGYGE 313

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            G G    + S  P+ V  L G  V+SVA G  HSL +
Sbjct: 314 QGDG-TASRQSPTPRPVPGLSG--VLSVATGTFHSLAV 348



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 41  DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           DG   +    RP+ G+  +R VA      H +A+  EG  + WG N  G+ G G    R 
Sbjct: 266 DGTFSNRATPRPVPGLSGVRCVATSFF--HSLALRAEGTVWAWGLNGYGEQGDG-TASRQ 322

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
            PT         +     G  H++ V  +G   A+G N  GQLG G+  +   P
Sbjct: 323 SPTPRPVPGLSGVLSVATGTFHSLAVNTNGTVSAWGHNGQGQLGDGTATHRSTP 376



 Score = 43.1 bits (100), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 13/121 (10%)

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGK----LKNNG--DDWMYPKPLMDLSGWNLRCMDSG 339
           P   +SAG  +S      G ++ WG     L+  G       P P+  LS  ++  + +G
Sbjct: 33  PRVPLSAGDSHSLAVHADGSVWAWGASASGLREEGALSRRFAPVPVPGLS--DIVSVAAG 90

Query: 340 NMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H   V AD +  +WG   YG+LG G     + A+P +V  L G  V +VA G GHSL 
Sbjct: 91  GAHSLAVRADGTLWTWGGNPYGQLGDGT--TTARALPVQVAGLSG--VRAVATGLGHSLA 146

Query: 399 I 399
           +
Sbjct: 147 L 147


>gi|432931000|ref|XP_004081565.1| PREDICTED: uncharacterized protein LOC101156289 [Oryzias latipes]
          Length = 1512

 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 28/241 (11%)

Query: 34  GRRKGALDGNLVSPT-----RLRPLVG-VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNER 87
           GR + A  G   SP      +L P      +  ++AGC +    A+  +GR + WG N  
Sbjct: 61  GRNQKAQLGQCRSPKTGSFLQLHPFCQRARVTMLSAGCSTS--AALTDDGRLFMWGDNSA 118

Query: 88  GQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG--SG 145
           GQ+G GD++    P  V       +K    G SH+  VT  G+   FG + +G+LG    
Sbjct: 119 GQIGLGDELFTAEPREVG--VGEAVKWVSCGNSHSAFVTVAGDLYTFGESANGRLGLQVE 176

Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
            + N   P  V+ ++  VT   CG   TV L+   G  +   G  +YGQLGHGT      
Sbjct: 177 QLDNHRVPQRVQGVLGHVTQVCCGGQHTVVLT---GEDVFTFGGGRYGQLGHGT------ 227

Query: 206 KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE 265
                   +EA P P+ +      ++ ++ACG NHT  + + G +YT+G G +G+LG  E
Sbjct: 228 ------FLFEA-PWPKPLQHFHKCSVRQIACGENHTAVITNGGLLYTFGDGRHGKLGLTE 280

Query: 266 Q 266
           +
Sbjct: 281 E 281



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 78/301 (25%), Positives = 127/301 (42%), Gaps = 42/301 (13%)

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---SGSIRNEIEPSPVRCLVSEVTATACGA 170
           +   GR H+ V+T +      G N+  QLG   S    + ++  P  C  + VT  + G 
Sbjct: 40  RVSCGREHSAVITAEDRVYYAGRNQKAQLGQCRSPKTGSFLQLHPF-CQRARVTMLSAGC 98

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             +  L+  +   +   G    GQ+G G +             + A+PR   +    GE 
Sbjct: 99  STSAALT--DDGRLFMWGDNSAGQIGLGDE------------LFTAEPREVGV----GEA 140

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEW-VPRRVDVFQRNNVLPPEA 288
           +  V+CG +H+  V   G +YT+G    GRLG + EQ D   VP+RV       VL    
Sbjct: 141 VKWVSCGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRV-----QGVLGHVT 195

Query: 289 VISAGSVNSSC-------TAGGGQLYMWGKLKNNG--DDWMYPKPLMDLSGWNLRCMDSG 339
            +  G  ++         T GGG+   +G+L +     +  +PKPL      ++R +  G
Sbjct: 196 QVCCGGQHTVVLTGEDVFTFGGGR---YGQLGHGTFLFEAPWPKPLQHFHKCSVRQIACG 252

Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
             H  V  +   + ++G  ++G+LG       +   P         HV SV+CG  H LV
Sbjct: 253 ENHTAVITNGGLLYTFGDGRHGKLGLTEENFVNQFSPTLCTQFLKFHVQSVSCGDHHMLV 312

Query: 399 I 399
           +
Sbjct: 313 L 313



 Score = 48.5 bits (114), Expect = 0.007,   Method: Composition-based stats.
 Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 28/198 (14%)

Query: 54  VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDR-PTIVSELSKYK 111
           VG  +++V+  C + H   V V G  YT+G +  G+LG   +++   R P  V  +  + 
Sbjct: 137 VGEAVKWVS--CGNSHSAFVTVAGDLYTFGESANGRLGLQVEQLDNHRVPQRVQGVLGH- 193

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPV----RCLVSEVTAT 166
           + +   G  HTVV+T + +   FG  ++GQLG G+   E   P P+    +C V ++   
Sbjct: 194 VTQVCCGGQHTVVLTGE-DVFTFGGGRYGQLGHGTFLFEAPWPKPLQHFHKCSVRQI--- 249

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           ACG + T  +++  G  +   G  ++G+LG   +N  N            Q  P      
Sbjct: 250 ACGENHTAVITN--GGLLYTFGDGRHGKLGLTEENFVN------------QFSPTLCTQF 295

Query: 227 AGETIVKVACGTNHTVAV 244
               +  V+CG +H + +
Sbjct: 296 LKFHVQSVSCGDHHMLVL 313


>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
           vitripennis]
          Length = 1083

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 146/328 (44%), Gaps = 31/328 (9%)

Query: 23  LFC-GSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           ++C GST +  +G   G  D N++ P  L       +  +A G    H V +  +G  ++
Sbjct: 28  MYCWGSTVYGELGL-GGIEDENILMPRELDFQKATAVEQIACG--ETHTVLITKDGEVFS 84

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
            G N+ GQLGH    +R +  ++  L  +  K+A  G SH+V V   G    +G N  GQ
Sbjct: 85  CGNNDSGQLGHEKPTKRLQ--MIPGLDAFIFKQAACGASHSVAVNNWGQLFCWGSNADGQ 142

Query: 142 LGSGS-IRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG G+ +     P  V+ L  S V   ACG   T+ L++     +   G    GQLG G 
Sbjct: 143 LGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHTLALTN--NGELYAWGSNSDGQLGLGQ 200

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
           D +  T             RP+ I  LA   I  +ACG  H++ V   G V+ WG   +G
Sbjct: 201 DVKIET-------------RPKLITGLATIPIAFIACGGYHSIVVSKSGAVFGWGRNTFG 247

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY----MWGKLKNN 315
           +LG  +  D++VP  +   +   V   + V      +   T  GG       M+G+L + 
Sbjct: 248 QLGMNDISDKYVPCLLKTLRNAKV---KYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHG 304

Query: 316 GD-DWMYPKPLMDLSGWNLRCMDSGNMH 342
            + + + P+ +++L G  +  +  G  H
Sbjct: 305 ANSNEILPRQIIELMGSVVTQISCGKRH 332



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 152/337 (45%), Gaps = 36/337 (10%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK---IKKAGAGRSHTVVVTEDGNSL 132
           +   Y WG    G+LG G  I+ +   +  EL   K   +++   G +HTV++T+DG   
Sbjct: 25  DNNMYCWGSTVYGELGLGG-IEDENILMPRELDFQKATAVEQIACGETHTVLITKDGEVF 83

Query: 133 AFGWNKHGQLGSGSIRNEIEPSP-VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
           + G N  GQLG       ++  P +   + +    ACGA  +V +++     +   G   
Sbjct: 84  SCGNNDSGQLGHEKPTKRLQMIPGLDAFIFK--QAACGASHSVAVNN--WGQLFCWGSNA 139

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            GQLG GT          + +A+     PR + AL    +V++ACG  HT+A+ + G +Y
Sbjct: 140 DGQLGLGT---------PLTIAH----TPRMVKALGTSIVVQIACGKKHTLALTNNGELY 186

Query: 252 TWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            WG    G+LG  ++ K E  P+ +          P A I+ G  +S   +  G ++ WG
Sbjct: 187 AWGSNSDGQLGLGQDVKIETRPKLITGLAT----IPIAFIACGGYHSIVVSKSGAVFGWG 242

Query: 311 KLK------NNGDDWMYPKPLMDLSGWNLRCMDSGN-MHHFVGADSSCISWGHAQYGELG 363
           +        N+  D   P  L  L    ++ +  G     F+  D    + G   YG+LG
Sbjct: 243 RNTFGQLGMNDISDKYVPCLLKTLRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLG 302

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           +G     +  +P+++  L G  V  ++CG  H+L +V
Sbjct: 303 HG--ANSNEILPRQIIELMGSVVTQISCGKRHTLALV 337



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 63/136 (46%), Gaps = 3/136 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +  L  + I F+A G    H + V   G  + WGRN  GQLG  D   +  P ++  
Sbjct: 208 PKLITGLATIPIAFIACG--GYHSIVVSKSGAVFGWGRNTFGQLGMNDISDKYVPCLLKT 265

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L   K+K    G   +V +T DG     G   +GQLG G+  NEI P  +  L+ S VT 
Sbjct: 266 LRNAKVKYVACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPRQIIELMGSVVTQ 325

Query: 166 TACGADFTVWLSSVEG 181
            +CG   T+ L    G
Sbjct: 326 ISCGKRHTLALVPSRG 341



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 335 CMDSGNMH---HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
           C+ +   H     +  D++   WG   YGELG G    ++  MP+++D  +   V  +AC
Sbjct: 9   CIKADTFHLPLKLIPNDNNMYCWGSTVYGELGLGGIEDENILMPRELDFQKATAVEQIAC 68

Query: 392 GYGHSLVI 399
           G  H+++I
Sbjct: 69  GETHTVLI 76



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 81/218 (37%), Gaps = 71/218 (32%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YG+LG G       +D ++ +       PR +       + ++ACG  HTV +   G V+
Sbjct: 36  YGELGLG-----GIEDENILM-------PRELDFQKATAVEQIACGETHTVLITKDGEVF 83

Query: 252 TWGFGGYGRLGHRE--QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           + G    G+LGH +  ++ + +P  +D F            + G+ +S      GQL+ W
Sbjct: 84  SCGNNDSGQLGHEKPTKRLQMIPG-LDAFIFKQA-------ACGASHSVAVNNWGQLFCW 135

Query: 310 GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQ 369
           G   +N D                                          G+LG G    
Sbjct: 136 G---SNAD------------------------------------------GQLGLGT-PL 149

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGE 407
             +  P+ V  L    V+ +ACG  H+L +   TN GE
Sbjct: 150 TIAHTPRMVKALGTSIVVQIACGKKHTLAL---TNNGE 184


>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
          Length = 2101

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 160/384 (41%), Gaps = 44/384 (11%)

Query: 46   SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            SP R+        R V   C   H   +  +   YT+G  E G+LGHG++     P  V 
Sbjct: 1731 SPIRMASFPRPLRRVVQIACGYRHTALITDDRHLYTFGHGECGRLGHGNQEDCTEPVSVG 1790

Query: 106  ELSKY---------KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPV 156
              +            + +   GR HT+ VT  G+   FGW + G+LG+G   + + P+ V
Sbjct: 1791 YFTSLIEAEGVDVGGVVEVSCGREHTMAVTASGDLFGFGWGEAGRLGTGETGSSLYPTRV 1850

Query: 157  RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              L   + A ACG + T+ L+         AG    G+LG+G++ +              
Sbjct: 1851 TDL-QNIAAVACGREHTLALTRKGRVFAFGAGFG--GRLGNGSETD-------------- 1893

Query: 217  QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
            +  P A+  L    I  +  G  H+ A+ ++G V TWGFG  G LGH ++ +   PRR++
Sbjct: 1894 EELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDNCLEPRRIE 1953

Query: 277  -------VFQRNNVLPPEAVISA---GSVNSSCTAGGGQLYMWGKLK--NNGDDWMYPKP 324
                   +    N     +V+SA   GS ++      G LY WG         +++    
Sbjct: 1954 GPWTGNAIDGEENQASETSVVSAIACGSYHTLAATSDGALYGWGDAAAGQLSVEYITAPE 2013

Query: 325  LMDLSGWNLRC-MDSGNMHHFVGADSS--CISWGHAQY---GELGYGPYGQKSSAMPKKV 378
            ++ L+   +R   +SG      G  +S  C + GH         G G   +   A  K++
Sbjct: 2014 MVVLTPQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAPLEVDDARVKRI 2073

Query: 379  DILEGMHVISVACGYGHSLVIVDR 402
             +L       VACG  H++ I  +
Sbjct: 2074 GVLGEFEFSQVACGAYHAVAITRK 2097



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 106/259 (40%), Gaps = 31/259 (11%)

Query: 30   WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
            W   GR      G+ + PTR+  L  +     A  C   H +A+  +GR + +G    G+
Sbjct: 1830 WGEAGRLGTGETGSSLYPTRVTDLQNI----AAVACGREHTLALTRKGRVFAFGAGFGGR 1885

Query: 90   LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
            LG+G +   + P  V  L  Y+I    AG  H+  ++ +G+ L +G+   G LG G   N
Sbjct: 1886 LGNGSETDEELPFAVQGLEDYRIAAIDAGECHSCALSTEGDVLTWGFGSSGALGHGDRDN 1945

Query: 150  EIEPSPVR---------------CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
             +EP  +                   S V+A ACG+  T  L++    ++   G    GQ
Sbjct: 1946 CLEPRRIEGPWTGNAIDGEENQASETSVVSAIACGSYHT--LAATSDGALYGWGDAAAGQ 2003

Query: 195  LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            L      EY T    V L       P+ I       I  VACGT  +    ++G+++ WG
Sbjct: 2004 LS----VEYITAPEMVVLT------PQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWG 2053

Query: 255  FGGYGRLGHREQKDEWVPR 273
                G     E  D  V R
Sbjct: 2054 SPAAGNGAPLEVDDARVKR 2072


>gi|225464728|ref|XP_002264236.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Vitis
           vinifera]
          Length = 489

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/267 (29%), Positives = 124/267 (46%), Gaps = 31/267 (11%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            IR  A G V  H VA+   G+ +TWG    G LGH    +   P +V      KI+   
Sbjct: 141 SIRSTALGGV--HSVALSSLGQVFTWGYGGFGALGHSVYHRELLPRMVEGSWNAKIRHIA 198

Query: 117 AGRSHTVVVTEDGNSLAFGWNK-HGQLGSGSIRNEIE------PSPVRCLVSEVTATACG 169
              +HT  +TE G    +G ++  G+LG G      E      PS V+ L   V A +CG
Sbjct: 199 TAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSCG 258

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAIAALAG 228
             FT+ L+             Q GQL + G ++ Y          ++ QP P    +L  
Sbjct: 259 GFFTMVLT-------------QEGQLWNWGANSNYELGRGDKVGGWKPQPIP----SLQD 301

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
             I+++A G  H++A+   G V +WG+G +G+LGH   +++ +P  ++     +V+    
Sbjct: 302 VRIIQIASGGYHSLALTDDGKVLSWGYGQHGQLGHSSIENQKIPTVIEALADEHVI---- 357

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN 315
            I+ G  +S+     G+LYMWG  K++
Sbjct: 358 YIACGGSSSAAITDNGKLYMWGNAKDS 384



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 108/242 (44%), Gaps = 36/242 (14%)

Query: 15  GKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVD 74
           G+++G   L  G  C    G  +G   G L  P++++ L    +   A  C     + + 
Sbjct: 217 GRDQGDGRLGLGPNC----GPNEG---GGLSIPSKVKAL---PVPVAAVSCGGFFTMVLT 266

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            EG+ + WG N   +LG GDK+   +P  +  L   +I +  +G  H++ +T+DG  L++
Sbjct: 267 QEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGGYHSLALTDDGKVLSW 326

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G+ +HGQLG  SI N+  P+ +  L  E V   ACG        S   A   N  L  +G
Sbjct: 327 GYGQHGQLGHSSIENQKIPTVIEALADEHVIYIACGG-------SSSAAITDNGKLYMWG 379

Query: 194 QLGHGTDNEYNTKDSSVKLA--YEAQPRPRAIAALAGE------TIVKVACGTNHTVAVD 245
                     N KDS + +    E QP P  +  L  +       ++ VA G +H + + 
Sbjct: 380 ----------NAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNVLSVAVGASHAMCLV 429

Query: 246 SK 247
           S 
Sbjct: 430 SS 431



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 142/358 (39%), Gaps = 54/358 (15%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSEL---------------------SKYKIKKAG 116
           +  +WGR   GQLG G +  R  P+ V+ L                     +   + + G
Sbjct: 36  QLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLCPIPGRLCLPSVENASGLTEVG 95

Query: 117 --AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
              G  H+ +V  DG    +G    G+LG G       P+ +   +  + +TA G   +V
Sbjct: 96  ISCGLFHSSLVV-DGKLWIWGKGDGGRLGFGQEYPAFLPT-LNPNLDSIRSTALGGVHSV 153

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            LSS+    +   G   +G LGH                Y  +  PR +       I  +
Sbjct: 154 ALSSL--GQVFTWGYGGFGALGHSV--------------YHRELLPRMVEGSWNAKIRHI 197

Query: 235 ACGTNHTVAVDSKGYVYTWGFG-GYGRLGHREQKDEWVPRRVDVFQRNNVLP-PEAVISA 292
           A    HT A+   G +YTWG   G GRLG            + +  +   LP P A +S 
Sbjct: 198 ATAGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVPVAAVSC 257

Query: 293 GSVNSSCTAGGGQLYMWGKLKN----NGDD---WMYPKPLMDLSGWNLRCMDSGNMHHF- 344
           G   +      GQL+ WG   N     GD    W  P+P+  L    +  + SG  H   
Sbjct: 258 GGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWK-PQPIPSLQDVRIIQIASGGYHSLA 316

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           +  D   +SWG+ Q+G+LG+     ++  +P  ++ L   HVI +ACG   S  I D 
Sbjct: 317 LTDDGKVLSWGYGQHGQLGHSSI--ENQKIPTVIEALADEHVIYIACGGSSSAAITDN 372



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 26/242 (10%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRDRPTIVSELSKYK----- 111
           IR +A      H  A+   G  YTWGR++  G+LG G     +    +S  SK K     
Sbjct: 194 IRHIAT--AGTHTAAITESGELYTWGRDQGDGRLGLGPNCGPNEGGGLSIPSKVKALPVP 251

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGA 170
           +     G   T+V+T++G    +G N + +LG G      +P P+  L    +   A G 
Sbjct: 252 VAAVSCGGFFTMVLTQEGQLWNWGANSNYELGRGDKVGGWKPQPIPSLQDVRIIQIASGG 311

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ L+  +   +L+ G  Q+GQLGH +               E Q  P  I ALA E 
Sbjct: 312 YHSLALT--DDGKVLSWGYGQHGQLGHSS--------------IENQKIPTVIEALADEH 355

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAV 289
           ++ +ACG + + A+   G +Y WG     +LG     + + +P  V     ++ L P  V
Sbjct: 356 VIYIACGGSSSAAITDNGKLYMWGNAKDSQLGVPGLPETQPLPVEVKFLMEDDRLGPHNV 415

Query: 290 IS 291
           +S
Sbjct: 416 LS 417


>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
          Length = 954

 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 162/380 (42%), Gaps = 49/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+  +A  C + H      +G  +TWG    G+LGHG      RP 
Sbjct: 243 DVLIPKPLESDVVLDVNQIA--CGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  LS   +     G  HT  VT  G+   +G   +  G LG G+  +   P  V   +
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG+    W S++  +S  +   G   +G LGHG D E         LAY  
Sbjct: 361 EGLQVLSVACGS----WHSALTTSSGKLYTFGDGTFGVLGHG-DRE--------TLAY-- 405

Query: 217 QPRPRAIAALAGETIVKVACG----------TNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
              P+ + AL+G   +KVACG          TN T A      +YTWG G   RLGH ++
Sbjct: 406 ---PKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDK 462

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
           +   VP+ V      N       ++ G   +   A  G+++       G+L N   D   
Sbjct: 463 EPRLVPKCVQALLEYNF----HQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQ 518

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D L+   +  +  G  H   + + S   +WG    G LG+G    K    P  V+
Sbjct: 519 PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL--KDRKKPCLVE 576

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S++CG   +  I
Sbjct: 577 ALKDRHVKSISCGSNFTTCI 596



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACGT H      +G V+TWG    GRLGH    D   P+ V+   
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDD---WMYPKPLMDLSG 330
              V     +IS G  ++      G L+ WG    N      G +   W+  K    L G
Sbjct: 307 LTVV----DLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   +++ A PK+V+ L G   I V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG--DRETLAYPKEVEALSGFKTIKV 420

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  HS  IV+ TN
Sbjct: 421 ACGIWHSAAIVEVTN 435


>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
 gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
          Length = 1909

 Score =  100 bits (248), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 91/358 (25%), Positives = 140/358 (39%), Gaps = 79/358 (22%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P +L  L   DI  V+ G    H  AV   G   TWG  E GQLGHGD   +  P ++  
Sbjct: 682 PIKLESLT--DIVVVSIGFY--HSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPKVIQS 737

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTA 165
           L+ + I +   G  HT+ +T++G    +G +++GQLG G      +P PV  L    V  
Sbjct: 738 LTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMPVTALEKYNVLQ 797

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            A G+     L++ +   +   G      +G                A      P  + +
Sbjct: 798 IASGSTHCAVLTNSKEVLVFGNG----AAMG----------------AASIISIPTLVPS 837

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L    I K+ CG   T A+   G VYTWG G    LGH   + E  P+ V+  +  ++  
Sbjct: 838 LKYLHIDKLCCGHYSTAAISECGDVYTWGTG--QELGHGNNQTESTPKLVEALRNQSIRQ 895

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
               IS G  +++     G+++  GK                         DS       
Sbjct: 896 ----ISCGGRHTAFLTDSGRIFTSGK-------------------------DS------- 919

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
                        +G+LG+    Q     PKK++ L     ISV+CG  +++ + D T
Sbjct: 920 -------------FGQLGHQAGDQNK---PKKIESLTKTTFISVSCGENYNIALFDTT 961



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 20/203 (9%)

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR-----LGHREQKDE 269
           ++QP P  +       I  ++ G+ ++ A+   G VY WG G         LG  + +D+
Sbjct: 620 QSQPTPERLPNFNVSDICSISSGSYYSAALTENGDVYMWGRGSVKNPPVPVLGIPQIEDQ 679

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGD--DWMYPK 323
            +P +++       L    V+S G  +S+     G+L  WG  +     +GD  + + PK
Sbjct: 680 LLPIKLE------SLTDIVVVSIGFYHSAAVRANGELLTWGVGEEGQLGHGDTQNQVEPK 733

Query: 324 PLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            +  L+ + +  +  G  H   +  +    +WG ++YG+LG G   +    MP  V  LE
Sbjct: 734 VIQSLTSFWITQVQCGEKHTICLTKNGKVYTWGSSEYGQLGLGDTTRYCKPMP--VTALE 791

Query: 383 GMHVISVACGYGHSLVIVDRTNV 405
             +V+ +A G  H  V+ +   V
Sbjct: 792 KYNVLQIASGSTHCAVLTNSKEV 814


>gi|47208715|emb|CAF91945.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 380

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 141/349 (40%), Gaps = 54/349 (15%)

Query: 83  GRNERGQLGHGDKIQRDRPTI--VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           G N  GQLGHGD   R  P +   + L    ++    G  HT V+T DG     G N  G
Sbjct: 1   GANSYGQLGHGDVEDRSAPRLCDTAPLKDGAVRVVAGGGGHTAVITGDGEVFVCGQNHRG 60

Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           QLG G + +         L   VT   CG DFT++L+  +   +L+ G   +GQLG G  
Sbjct: 61  QLGLGHLADISALQRCPSLTHTVTNVTCGWDFTLFLT--DSGRVLSCGSNAFGQLGIGQK 118

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
             +  +   V+    A              +V VA G  H +AV   G VY WG G    
Sbjct: 119 PNFTAEVQVVESLKAA--------------VVSVAAGLRHALAVTDSGRVYQWGRGLL-- 162

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPP--------EAVISAGSVNSSCTAGGGQLYMWGKL 312
               + K    P  V     + V  P          +++AGS++  C    G L++WG  
Sbjct: 163 ---SQAKRTLGPSSVPPHLGSTVPSPVPGLDQKTSRMVTAGSMHCVCLTEDGDLFLWGSN 219

Query: 313 KN----NGDDWM---YPKPLMDLSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELGY 364
           K+    + D ++    P     L G  +  + SG  H     ++    +WG   YG+LG 
Sbjct: 220 KHGQLVSRDPFLSSAMPVKRSLLGGERVGGVWSGWTHIIAQTETGRVFTWGRGNYGQLGR 279

Query: 365 GPYGQKS-------------SAMPKKVDILEGMHVISVACGYGHSLVIV 400
                +S             + +P +V  L+G     +ACG  H+L I+
Sbjct: 280 PAPTSRSPESRSTTDGANLEAGLPAEVKALQG--ATQIACGSEHNLAIL 326



 Score = 55.5 bits (132), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 146/371 (39%), Gaps = 46/371 (12%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL    +R VA G    H   +  +G  +  G+N RGQLG G             L+ + 
Sbjct: 26  PLKDGAVRVVAGG--GGHTAVITGDGEVFVCGQNHRGQLGLGHLADISALQRCPSLT-HT 82

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSEVTATACGA 170
           +     G   T+ +T+ G  L+ G N  GQLG G   N   E   V  L + V + A G 
Sbjct: 83  VTNVTCGWDFTLFLTDSGRVLSCGSNAFGQLGIGQKPNFTAEVQVVESLKAAVVSVAAGL 142

Query: 171 DFTVWLSSVEGASILNAG-LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
              +        ++ ++G + Q+G+ G  +  +     SSV   +     P  +  L  +
Sbjct: 143 RHAL--------AVTDSGRVYQWGR-GLLSQAKRTLGPSSVP-PHLGSTVPSPVPGLDQK 192

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
           T   V  G+ H V +   G ++ WG   +G+L  R   D ++   + V  + ++L  E V
Sbjct: 193 TSRMVTAGSMHCVCLTEDGDLFLWGSNKHGQLVSR---DPFLSSAMPV--KRSLLGGERV 247

Query: 290 --ISAGSVNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRC------- 335
             + +G  +       G+++ WG+     L         P+      G NL         
Sbjct: 248 GGVWSGWTHIIAQTETGRVFTWGRGNYGQLGRPAPTSRSPESRSTTDGANLEAGLPAEVK 307

Query: 336 -------MDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
                  +  G+ H+        +SWG  ++G  G G +        ++  ++  +  + 
Sbjct: 308 ALQGATQIACGSEHNLAILAGRLLSWGWNEHGMCGDGSHTDV-----RQPQLVPALRPLL 362

Query: 389 VACGYGHSLVI 399
           + CG GHS+ +
Sbjct: 363 IGCGAGHSMAV 373


>gi|297800804|ref|XP_002868286.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297314122|gb|EFH44545.1| hypothetical protein ARALYDRAFT_493465 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1867

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 152/363 (41%), Gaps = 57/363 (15%)

Query: 64   GCVSCHCVAVDV------------EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
            G V+C  V +D+            +G  +TWG    G+LGHG ++   RP +V  L+   
Sbjct: 1075 GTVNCRTVKIDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTN 1134

Query: 112  IKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--EVTATA 167
            I     G  HT  V+  G+   +G   H  G LG GS  +   P  V   V   +V + A
Sbjct: 1135 IDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVA 1194

Query: 168  CGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
            CG     W S++  A+  +   G   +G LGHG                E+   P+ +  
Sbjct: 1195 CG----TWHSALATANGKLFTFGDGAFGVLGHGD--------------RESVSYPKEVKM 1236

Query: 226  LAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L+G   +KVACG  HTVA+           S   ++TWG G   RLGH  ++   +P  V
Sbjct: 1237 LSGLKTMKVACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTCV 1296

Query: 276  DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYPKPLMD-LSG 330
                  N    + +    ++  + T  G    M     G+L ++  D   P  + D L G
Sbjct: 1297 SSLIDYNF---QQIACGHTLTVALTTSGHVFTMGGTSHGQLGSSNSDGKLPCLVQDRLVG 1353

Query: 331  WNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
              +  +  G+ H   + + S   +WG    G LG+G   ++    P  V+ L+  HV S+
Sbjct: 1354 EFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHG--DKEDRKTPTLVEALKERHVKSI 1411

Query: 390  ACG 392
            +C 
Sbjct: 1412 SCA 1414



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 124/281 (44%), Gaps = 36/281 (12%)

Query: 47   PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
            P R+  P+ G+ +  VA  C + H       G+ +T+G    G LGHGD+     P  V 
Sbjct: 1178 PKRVSGPVEGLQVLSVA--CGTWHSALATANGKLFTFGDGAFGVLGHGDRESVSYPKEVK 1235

Query: 106  ELSKYKIKKAGAGRSHTVVVTE----DGNSLA----FGWNK--HGQLGSGSIRNEIEPSP 155
             LS  K  K   G  HTV + E     G S++    F W      +LG G+    + P+ 
Sbjct: 1236 MLSGLKTMKVACGVWHTVAIVEVMNQTGTSMSSKKLFTWGDGDKNRLGHGNKETYLLPTC 1295

Query: 156  VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            V  L+       ACG   TV L++     +   G   +GQLG        + +S  KL  
Sbjct: 1296 VSSLIDYNFQQIACGHTLTVALTT--SGHVFTMGGTSHGQLG--------SSNSDGKLPC 1345

Query: 215  EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
              Q R      L GE + +++CG +H   + S+  V+TWG G  GRLGH +++D   P  
Sbjct: 1346 LVQDR------LVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKEDRKTPTL 1399

Query: 275  VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN 315
            V+  +  +V       S    + S  +G  Q + + + ++N
Sbjct: 1400 VEALKERHVK------SISCADQSVCSGCRQAFGFTRKRHN 1434



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 16/183 (8%)

Query: 232  VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
            + +ACG  H   V  +G V+TWG    GRLGH  Q D   P+ V+     N+      ++
Sbjct: 1084 IDIACGVRHIALVTRQGEVFTWGEEAGGRLGHGIQVDVSRPKLVEFLALTNI----DFVA 1139

Query: 292  AGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSGWNLRCMDSGNMH 342
             G  ++   +  G L+ WG       L  +G D   W+  +    + G  +  +  G  H
Sbjct: 1140 CGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEGLQVLSVACGTWH 1199

Query: 343  H-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
                 A+    ++G   +G LG+G   ++S + PK+V +L G+  + VACG  H++ IV+
Sbjct: 1200 SALATANGKLFTFGDGAFGVLGHG--DRESVSYPKEVKMLSGLKTMKVACGVWHTVAIVE 1257

Query: 402  RTN 404
              N
Sbjct: 1258 VMN 1260


>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 992

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 20/232 (8%)

Query: 48  TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
           T  RPL  ++ R  +   C   H +A+  +G+ + WG N  GQLG   ++     P  + 
Sbjct: 104 TVCRPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQ 163

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L +  + +  AG +H+ V++  G    +G N  GQLG G  ++   P+ V+ L  + T 
Sbjct: 164 SLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTV 223

Query: 166 T-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + +CG + T  LS  +G ++   G   +GQLGH +      KD         +  PR IA
Sbjct: 224 SISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRLIA 267

Query: 225 ALAGETIVKVACGTNHTVAV-DSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L G  + +V CG +HT+   +S   +Y++G G  G+LG+ EQ  + VP  V
Sbjct: 268 ELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPV 319



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 19/231 (8%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G+L   G      +G RK        SP  L+ L  + +  ++AG    H   + + G  
Sbjct: 134 GQLFVWGENTHGQLGLRKE--QAGTQSPQHLQSLCEIPVAQISAG--GNHSFVLSLSGVV 189

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG N  GQLG GD   R  PTIV  L   K      G  HT  +++ G    FG    
Sbjct: 190 FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 249

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG  S+++E  P  +  L  S+V+   CG   T+         I + G    GQLG+G
Sbjct: 250 GQLGHNSLKDEHHPRLIAELWGSKVSQVTCGRHHTLVFEE-SSKLIYSFGCGMQGQLGNG 308

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGE-TIVKVACGTNHTVAVDSKG 248
                      VK   ++ P P  +     E T+ K+  G +H+ A+  K 
Sbjct: 309 ---------EQVK---QSVPLPVLLPTECTEFTMEKLITGEHHSFALFFKN 347



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/193 (24%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
           R + +L    ++++ACG  H++A+ + G ++ WG   +G+LG R EQ     P+ +    
Sbjct: 107 RPLKSLENRQVIQIACGDQHSMALSNDGQLFVWGENTHGQLGLRKEQAGTQSPQHLQSLC 166

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G ++ WG          +  D   P  +  L G   
Sbjct: 167 E----IPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKKT 222

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +    +  ++G   +G+LG+     K    P+ +  L G  V  V CG
Sbjct: 223 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--KDEHHPRLIAELWGSKVSQVTCG 280

Query: 393 YGHSLVIVDRTNV 405
             H+LV  + + +
Sbjct: 281 RHHTLVFEESSKL 293


>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Taeniopygia guttata]
          Length = 1050

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 127/280 (45%), Gaps = 36/280 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSP-VRCLVSE--VTATACGADFTVWLSSVEGASILNAG 188
           L +G++ +GQ G GS    I P P V   + +  V   ACG + +V+L  +E   +   G
Sbjct: 2   LCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFL--LEDGEVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
           L   GQLGH  +                  +P  I ALAG+ IV VACG +H+VA+  +G
Sbjct: 60  LNTKGQLGHDCEGS----------------KPEQIGALAGQHIVHVACGESHSVALSDQG 103

Query: 249 YVYTWGFGGYGRLGHREQKDE-WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            +++WG G  G+LG    +D   VPR +    +  +L     +S G+ +    A  GQ +
Sbjct: 104 QLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ----VSCGNWHCLALAADGQFF 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQY 359
            WG+       L         P+ +  L G  L  + +G  H F  + S +   WG    
Sbjct: 160 TWGQNSYGQLGLGKECPSQASPQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG     ++    P  V +L    V+ ++CG  H+ V+
Sbjct: 220 GQLGLS--DERDRESPCHVKLLRSQKVVYISCGEEHTAVL 257



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 143/333 (42%), Gaps = 40/333 (12%)

Query: 82  WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG +  GQ G G  +Q     P +   +    +K+   G +H+V + EDG     G N  
Sbjct: 4   WGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGLNTK 63

Query: 140 GQLG---SGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
           GQLG    GS     +P  +  L  + +   ACG   +V LS  +   + + G    GQL
Sbjct: 64  GQLGHDCEGS-----KPEQIGALAGQHIVHVACGESHSVALS--DQGQLFSWGAGSDGQL 116

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G  T               +A   PR I  L  +TI++V+CG  H +A+ + G  +TWG 
Sbjct: 117 GLTTIE-------------DAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQ 163

Query: 256 GGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
             YG+LG  +E   +  P+RV          P A ++AG  +S   +  G ++ WGK   
Sbjct: 164 NSYGQLGLGKECPSQASPQRVKSLDG----IPLAQVAAGGAHSFALSLSGAVFGWGKNSS 219

Query: 314 -----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPY 367
                ++  D   P  +  L    +  +  G  H  V   S    ++G    G+LG+   
Sbjct: 220 GQLGLSDERDRESPCHVKLLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSM 279

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             + +  P++V  L G  V  +ACG  H+L  V
Sbjct: 280 NDEVN--PRRVLELMGSEVSQIACGRHHTLAFV 310



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 139/315 (44%), Gaps = 35/315 (11%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
             C   H V +  +G  YT G N +GQLGH    +  +P  +  L+   I     G SH+
Sbjct: 39  VACGGNHSVFLLEDGEVYTCGLNTKGQLGH--DCEGSKPEQIGALAGQHIVHVACGESHS 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSS 178
           V +++ G   ++G    GQLG  +I + +  P  ++ L  + +   +CG     W  L+ 
Sbjct: 97  VALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQVSCGN----WHCLAL 152

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGT 238
                    G   YGQLG G +               +Q  P+ + +L G  + +VA G 
Sbjct: 153 AADGQFFTWGQNSYGQLGLGKEC-------------PSQASPQRVKSLDGIPLAQVAAGG 199

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
            H+ A+   G V+ WG    G+LG  +++D   P  V + +   V+     IS G  +++
Sbjct: 200 AHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLRSQKVV----YISCGEEHTA 255

Query: 299 CTAGGGQLYMW-----GKLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSS 350
                G ++ +     G+L ++  +D + P+ +++L G  +  +  G  H   FV +   
Sbjct: 256 VLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIACGRHHTLAFVPSSGM 315

Query: 351 CISWGHAQYGELGYG 365
             ++G    G+LG G
Sbjct: 316 IYAFGCGTRGQLGTG 330



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R++ L G+ +  VAAG    H  A+ + G  + WG+N  GQLG  D+  R+ P  V 
Sbjct: 180 SPQRVKSLDGIPLAQVAAG--GAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEV+
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVS 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 298 QIACGRHHTLAFVPSSGM-IYAFGCGTRGQLGTG 330



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 101/231 (43%), Gaps = 19/231 (8%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I  VA G    H VA+  +G+ ++WG    GQLG    +     P ++ 
Sbjct: 75  PEQIGALAGQHIVHVACG--ESHSVALSDQGQLFSWGAGSDGQLGLTTIEDAVTVPRLIK 132

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSEVT 164
           +L++  I +   G  H + +  DG    +G N +GQLG G    ++  P  V+ L     
Sbjct: 133 KLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGIPL 192

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           A         +  S+ GA +   G    GQLG   + +  +              P  + 
Sbjct: 193 AQVAAGGAHSFALSLSGA-VFGWGKNSSGQLGLSDERDRES--------------PCHVK 237

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 238 LLRSQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 288


>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
          Length = 546

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGID-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V  VACG  H+   V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    A G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.9 bits (89), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D   V
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTV 55


>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
          Length = 2984

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 467 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 526

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 527 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 586

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 587 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 638

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 639 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 692

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 693 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 725



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 516 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 561

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 562 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 619

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 620 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 677

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 678 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 721



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/235 (22%), Positives = 86/235 (36%), Gaps = 59/235 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 433 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 492

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 493 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 552

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 553 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 610

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ +
Sbjct: 611 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIAL 663



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 526 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 585

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 586 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 645

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 646 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 689

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
               +   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 690 ----YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 745

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 746 LPGLDTKHIVGIACGPAQSFA 766


>gi|449468281|ref|XP_004151850.1| PREDICTED: uncharacterized protein LOC101206334 [Cucumis sativus]
          Length = 1085

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 149/370 (40%), Gaps = 57/370 (15%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ V+A     H VAV   G+ YTWG    G+LGH D  I   +  +++
Sbjct: 178 PCKIDSLHGSSIKLVSAS--KFHSVAVSACGQVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   +++   A + HTV+ TE G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVIFGLGSRRVRAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S++   A     T  +S  E   I   G  + GQLG+GT N  +               
Sbjct: 296 RSKIVDVAAANKHTAVVS--ESGEIFTWGCNREGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR----LGHREQKDEWVPRRV 275
           PR +  L G+   +VA    HT+ +   G VYTWG          +    +K    P + 
Sbjct: 342 PRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKF 401

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRC 335
              +R +V+     I+AG V+S      G ++ W                 D S  +LRC
Sbjct: 402 HRMKRLHVVN----IAAGMVHSMALTDDGAVFYW-----------------DSSDADLRC 440

Query: 336 MDSGNMHHFVGADSSCISWGH---AQYGELG--YGPYGQKSSAMPKKVDILEGM-HVISV 389
                ++   G D   IS G    A    +G  +   G+     P     L G+    SV
Sbjct: 441 Q---QLYSLCGRDVVSISAGKYWIAAVTSIGDVFMWDGKNGKDKPPAATRLHGIKRATSV 497

Query: 390 ACGYGHSLVI 399
           + G  H L++
Sbjct: 498 SVGETHLLIV 507



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 127/337 (37%), Gaps = 74/337 (21%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G++  +  P  +  L    IK   A + H+V V+  G    +
Sbjct: 152 VATELFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASKFHSVAVSACGQVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
           G+ + G+LG             I P  V   +    V A A     TV   + EG  +  
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVI--ATEGGEVFT 269

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + GQLG+ +               + QP PR +++L  + IV VA    HT  V  
Sbjct: 270 WGSNREGQLGYTS--------------VDTQPTPRRVSSLRSK-IVDVAAANKHTAVVSE 314

Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            G ++TWG    G+LG+        + PR V+ + +  V    A ++A   ++ C    G
Sbjct: 315 SGEIFTWGCNREGQLGYGTSNSASNYTPRVVE-YLKGKVF---ARVAAAKFHTICLGVDG 370

Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
           ++Y WG                               H  V      I+           
Sbjct: 371 EVYTWG-------------------------------HRLVTPRRVVIARNL-------- 391

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +KS   P K   ++ +HV+++A G  HS+ + D
Sbjct: 392 ----KKSGNTPLKFHRMKRLHVVNIAAGMVHSMALTD 424


>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
          Length = 2948

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 438 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 497

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 498 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 557

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 558 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 609

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 610 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 663

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 664 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 696



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 487 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 532

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 533 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 590

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 591 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 648

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 649 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 692



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 404 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 463

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 464 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 523

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 524 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 581

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 582 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 635



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 497 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 556

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 557 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 616

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 617 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 660

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
               +   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 661 ----YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 716

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 717 LPGLDTKHIVGIACGPAQSFA 737


>gi|351542221|ref|NP_001082438.2| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
           containing protein 1 [Xenopus laevis]
          Length = 600

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 22/268 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H +  + +G  Y+WG N   QLG+G+ IQ   P  +
Sbjct: 133 IMPRRLDVLCGKKIVDLSYG-SGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 191

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
             EL   K+ +   G  H++ +T DG   ++G+N  GQ+GSG+  N+  P  V   +   
Sbjct: 192 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSK 251

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +  A  T  ++  +   +   G    GQLG G     NT +         Q  P  +
Sbjct: 252 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 297

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  I++V  G  HT+A+  +G +Y WG   +G+LG   + ++ VP +V   +R   
Sbjct: 298 VFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 354

Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
                V +  S N S+  +  GQ+YMWG
Sbjct: 355 --MVEVTACHSTNISAAKSQSGQVYMWG 380



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G   +  +  T++     FG N    LG+G  ++ I P  +  L   ++   + G+   +
Sbjct: 98  GCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHI 157

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L + +G  + + G   Y QLG+G   +  T    V++  E          L  + +++V
Sbjct: 158 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIQV 203

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++A+ S G V++WG+   G++G     ++ VPR+V    ++ V+     ISAG 
Sbjct: 204 ACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVV---VSISAGQ 260

Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            +S      G +Y WG        L N G+  M P  L+      +  +  G  H    +
Sbjct: 261 TSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPICIIQVVLGYAHTLALS 319

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           D   + +WG   +G+LG G   + +  +P KV   E M
Sbjct: 320 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 355



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 14/179 (7%)

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           C  N  +       V+ +G      LG  + +   +PRR+DV     ++  +    +G  
Sbjct: 99  CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIV--DLSYGSGPH 156

Query: 296 NSSCTAGGGQLYMWG----KLKNNGDDWMYPKPL---MDLSGWNLRCMDSGNMHHF-VGA 347
              C    G++Y WG        NG+      P+   M+L    +  +  G+ H   + +
Sbjct: 157 ILLCNE-DGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTS 215

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVIVDRTNV 405
           D    SWG+   G++G G    +S  +P+KV   L+   V+S++ G   S+ + D  +V
Sbjct: 216 DGEVFSWGYNNCGQVGSGTTANQS--VPRKVASSLQSKVVVSISAGQTSSMALTDNGHV 272


>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
            mutus]
          Length = 4874

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 143/330 (43%), Gaps = 65/330 (19%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3997 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4053

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4054 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4112

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4113 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4158

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV   +                           Y  G+
Sbjct: 4159 TFGNGDYGRLGLGNTSNKKLPERVTALEG--------------------------YQIGQ 4192

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQK 370
             +NN             + + L+     N    V AD S + ++G   YG+LG G    K
Sbjct: 4193 ARNN-------------TLFFLQVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNSTAK 4239

Query: 371  SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            SS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4240 SS--PQKVDVLCGIGIKKVACGTQFSVALT 4267



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 89/344 (25%), Positives = 149/344 (43%), Gaps = 40/344 (11%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4045 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4101

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4102 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4161

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCL-----------VSEVTATACGADFTVWLSSVEGASI 184
               +G+LG G+  N+  P  V  L                  ACG + T+ +S+ +G+ +
Sbjct: 4162 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVACGLNHTLAVSA-DGSMV 4220

Query: 185  LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
               G   YG+LG G                 A+  P+ +  L G  I KVACGT  +VA+
Sbjct: 4221 WAFGDGDYGKLGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVAL 4266

Query: 245  DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
               G+VYT+G      L     ++   P+++ V     +      ++ G+ ++   A  G
Sbjct: 4267 TKDGHVYTFGQDRLIGLPEGRARNHNRPQQIPVLAGVVI----EDVAVGAEHTLALASTG 4322

Query: 305  QLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
             +Y WG          + +    P  +  L G N+R + +G  H
Sbjct: 4323 DVYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4366



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 584

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 585 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 630

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 631 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 651

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 652 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 698

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 699 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 729



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 505 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 560

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 561 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 620

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 621 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 663

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 664 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 697



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 73/290 (25%), Positives = 123/290 (42%), Gaps = 25/290 (8%)

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEG 181
           T +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G
Sbjct: 363 TPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG 420

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
            S+   G   YG+LG G  N  +T     KL +E     + +++  G           HT
Sbjct: 421 -SVRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHT 468

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTA 301
           +A  ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+   
Sbjct: 469 LAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVT 525

Query: 302 GGGQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWG 355
             G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G
Sbjct: 526 EDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFG 585

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 586 GGDNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 633



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4294 PQQIPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 4351

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4352 LQGKNVRQISAGRCHSAAWT 4371



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 578 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 635

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 636 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 693

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 694 QCGQGN 699


>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
          Length = 425

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 101/377 (26%), Positives = 161/377 (42%), Gaps = 47/377 (12%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           RP    D    +  C   H + +   GR +  G N+ GQLG G  +      I       
Sbjct: 66  RPGDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDE 125

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLV-SEVTATA 167
           K+ +  AG  H+  VT DG   A+G N  GQLG G    ++  +P  V CL  S V   A
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVKMVA 185

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-EAQPRPRAIAAL 226
            G++ ++  ++ E   +L+ G    G+LGHG       K S +  +   ++  PR I  L
Sbjct: 186 LGSEHSI--ATTEEGEVLSWGAAGAGRLGHG------HKTSILGFSITTSEYTPRLIKNL 237

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGF---GGYGRLGHREQKDEWVPRRVDVFQRNNV 283
            G  I ++A G  H+  +D KG ++ +G     G+GR G     DE  P  V+       
Sbjct: 238 DGVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSG-----DELRPTVVE------E 286

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKN-----NGDDW----------MYPKPLMDL 328
           +P    ++ G  ++      G LY WG  +N      G D           ++  P+  +
Sbjct: 287 VPFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKV 346

Query: 329 S-GWNLRCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           S GW    + SG   +   + GA+ +    GH+  G+LG+G         P  V+  +  
Sbjct: 347 SCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG--NDVDYFEPMMVEFGKNA 404

Query: 385 HVISVACGYGHSLVIVD 401
             + V+CG+ H+  I +
Sbjct: 405 RAVHVSCGFNHTGAIFE 421



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 139/342 (40%), Gaps = 46/342 (13%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSEL--------SKYKIKKAGAGRSHTVVVTEDGNSLA 133
           WG  + G+LG G    R  PT                       G +HT+ +TE G   A
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 134 FGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
            G N  GQLG G S+ + +EP  V     +V   + G   +  +++     +   G    
Sbjct: 97  AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTA--DGKLFAWGRNSS 154

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG G            K A +    PR +  LA   +  VA G+ H++A   +G V +
Sbjct: 155 GQLGLG------------KRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEVLS 202

Query: 253 WGFGGYGRLGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           WG  G GRLGH  +           E+ PR +       +      I+AG ++S+C    
Sbjct: 203 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKI----KRIAAGMLHSACIDEK 258

Query: 304 GQLYMWGKLKNNG----DDWMYPKPLMDLS-GWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
           G L+++G+    G     D + P  + ++     + C   G  H  V  DS  + SWG  
Sbjct: 259 GTLFIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVAC---GGYHTCVVTDSGDLYSWGSN 315

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           + G LG G      S    K  + +   V  V+CG+ H+ VI
Sbjct: 316 ENGCLGLGGTDMVRSPEVLKSSLFK-FPVSKVSCGWKHTAVI 356



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNN----VLPPEAVISAGSVNSSCTAGGGQLYM 308
           WG G YGRLG    +  W P     F           P A ++ G  ++      G+++ 
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 309 -----WGKLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHH-FVGADSSCISWGHAQYG 360
                +G+L   G    +    +++SG++ + ++  +GN H   V AD    +WG    G
Sbjct: 97  AGLNDFGQL-GIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSG 155

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +LG G    K  + P+KVD L    V  VA G  HS+   +   V
Sbjct: 156 QLGLGKRAGKVVSTPRKVDCLADSRVKMVALGSEHSIATTEEGEV 200



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 48/262 (18%)

Query: 175 WLSSVEGASILNAGLP--------------QYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           W S    A +L++G P               YG+LG G      ++ S     +    RP
Sbjct: 11  WRSQRRAARMLSSGEPAAGRRRVAALWGNGDYGRLGMGA---LESRWSPTACPFFLTGRP 67

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQ 279
                   +    +ACG  HT+ +   G V+  G   +G+LG        + P  V  F 
Sbjct: 68  ---GDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD 124

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGW 331
              V      +SAG+ +S      G+L+ WG+         K  G     P+ +  L+  
Sbjct: 125 EKVV-----EVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADS 179

Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM----------PKKVDI 380
            ++ +  G+ H     +    +SWG A  G LG   +G K+S +          P+ +  
Sbjct: 180 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLG---HGHKTSILGFSITTSEYTPRLIKN 236

Query: 381 LEGMHVISVACGYGHSLVIVDR 402
           L+G+ +  +A G  HS  I ++
Sbjct: 237 LDGVKIKRIAAGMLHSACIDEK 258


>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
          Length = 928

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V  VACG  H+   V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    A G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.5 bits (88), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D   V
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTV 55


>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
           [Xenopus laevis]
 gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
          Length = 1050

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 124/262 (47%), Gaps = 32/262 (12%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G++  CG   W+  G+   + +G    P  +  L    I+ +A G    H +A+ ++G  
Sbjct: 53  GQVYSCG---WNGEGQLGHSHEGT--HPAPVATLAEEHIKHIACG--QSHSLALSLQGNL 105

Query: 80  YTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           Y+WG    GQLGH       R P I+ +LS+ KI++   G  H + + +DG    +G N 
Sbjct: 106 YSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNT 165

Query: 139 HGQLGSGS-IRNEIEPSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           HGQLG G+   ++  P  V+ L    +++VTA   G   +  LS + GA +   G    G
Sbjct: 166 HGQLGLGNGFISQSSPQKVKSLEGIPLAQVTA---GGSHSFALS-LSGA-VFGWGKNSAG 220

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG          D  VK        P  +  L    +V ++CG  HT  +   G ++T+
Sbjct: 221 QLG--------LNDEQVK------ETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTF 266

Query: 254 GFGGYGRLGHREQKDEWVPRRV 275
           G GG G+LGH    +E  PRRV
Sbjct: 267 GAGGSGQLGHDSLHNEINPRRV 288



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 146/330 (44%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHGDKIQR--DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG +  GQLG+G  ++     P   +      +K+   G  HT+ + EDG   + GWN  
Sbjct: 4   WGHSAFGQLGNGHSLKNAVSEPCACTFSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGE 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG         P+PV  L  E +   ACG   ++ L S++G ++ + G    GQLGH 
Sbjct: 64  GQLGHS--HEGTHPAPVATLAEEHIKHIACGQSHSLAL-SLQG-NLYSWGAGNDGQLGHA 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
           T   Y+               PR I  L+ + I +++CG +H +A+   G ++TWG   +
Sbjct: 120 TVEHYSR-------------IPRIIKKLSQQKIQQMSCGDDHCLALGDDGQLFTWGQNTH 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG       +  P++V   +      P A ++AG  +S   +  G ++ WGK      
Sbjct: 167 GQLGLGNGFISQSSPQKVKSLEG----IPLAQVTAGGSHSFALSLSGAVFGWGKNSAGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQK 370
             N+      P  +  L    +  +  G  H  +   +    ++G    G+LG+     +
Sbjct: 223 GLNDEQVKETPCHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P++V  L G  V  +ACG  H+L  V
Sbjct: 283 IN--PRRVLELMGSEVSQIACGRKHTLAFV 310



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 79/157 (50%), Gaps = 4/157 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP +++ L G+ +  V AG    H  A+ + G  + WG+N  GQLG  D+  ++ P  V 
Sbjct: 180 SPQKVKSLEGIPLAQVTAG--GSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L  +K+     G  HT ++T+ G    FG    GQLG  S+ NEI P  V  L+ SEV+
Sbjct: 238 PLRTHKVVYISCGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVS 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
             ACG   T+      G ++   G    GQLG G +N
Sbjct: 298 QIACGRKHTLAFVPSSG-TLYAFGCGDLGQLGTGHEN 333



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 38/281 (13%)

Query: 132 LAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTAT---ACGADFTVWLSSVEGASILNA 187
           L +G +  GQLG+G S++N +   P  C  S  T     ACG   T++L  +E   + + 
Sbjct: 2   LCWGHSAFGQLGNGHSLKNAVS-EPCACTFSLATCVKEVACGGKHTLFL--MEDGQVYSC 58

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    GQLGH  +  +                P  +A LA E I  +ACG +H++A+  +
Sbjct: 59  GWNGEGQLGHSHEGTH----------------PAPVATLAEEHIKHIACGQSHSLALSLQ 102

Query: 248 GYVYTWGFGGYGRLGHRE-QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
           G +Y+WG G  G+LGH   +    +PR +    +  +      +S G  +       GQL
Sbjct: 103 GNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKI----QQMSCGDDHCLALGDDGQL 158

Query: 307 YMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQ 358
           + WG+       L N       P+ +  L G  L  + +G  H F +    +   WG   
Sbjct: 159 FTWGQNTHGQLGLGNGFISQSSPQKVKSLEGIPLAQVTAGGSHSFALSLSGAVFGWGKNS 218

Query: 359 YGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            G+LG     ++    P  V  L    V+ ++CG  H+ ++
Sbjct: 219 AGQLGLN--DEQVKETPCHVKPLRTHKVVYISCGEEHTAIL 257



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 37/322 (11%)

Query: 60  FVAAGCV---SC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
           F  A CV   +C   H + +  +G+ Y+ G N  GQLGH    +   P  V+ L++  IK
Sbjct: 30  FSLATCVKEVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSH--EGTHPAPVATLAEEHIK 87

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGAD 171
               G+SH++ ++  GN  ++G    GQLG  ++ +    P  ++ L  + +   +CG D
Sbjct: 88  HIACGQSHSLALSLQGNLYSWGAGNDGQLGHATVEHYSRIPRIIKKLSQQKIQQMSCGDD 147

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
             + L   +   +   G   +GQLG G               + +Q  P+ + +L G  +
Sbjct: 148 HCLALG--DDGQLFTWGQNTHGQLGLGN-------------GFISQSSPQKVKSLEGIPL 192

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
            +V  G +H+ A+   G V+ WG    G+LG  +++ +  P  V   + + V+     IS
Sbjct: 193 AQVTAGGSHSFALSLSGAVFGWGKNSAGQLGLNDEQVKETPCHVKPLRTHKVV----YIS 248

Query: 292 AGSVNSSCTAGGGQLYMWGK--LKNNGDDWMY----PKPLMDLSGWNLRCMDSGNMHH-- 343
            G  +++     G L+ +G       G D ++    P+ +++L G  +  +  G  H   
Sbjct: 249 CGEEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVLELMGSEVSQIACGRKHTLA 308

Query: 344 FVGADSSCISWGHAQYGELGYG 365
           FV +  +  ++G    G+LG G
Sbjct: 309 FVPSSGTLYAFGCGDLGQLGTG 330



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  ++PL    + +++ G    H   +   G  +T+G    GQLGH        P  V 
Sbjct: 232 TPCHVKPLRTHKVVYISCG--EEHTAILTKAGGLFTFGAGGSGQLGHDSLHNEINPRRVL 289

Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           EL   ++ +   GR HT+  V   G   AFG    GQLG+G   N   P+ V+
Sbjct: 290 ELMGSEVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVVK 342


>gi|156394306|ref|XP_001636767.1| predicted protein [Nematostella vectensis]
 gi|156223873|gb|EDO44704.1| predicted protein [Nematostella vectensis]
          Length = 363

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 148/353 (41%), Gaps = 36/353 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D   V   C   H   V   G+ YT+G N+ GQLGHG+     +P++V +L   K+    
Sbjct: 34  DDAVVNLSCGDEHSAVVTANGKLYTFGCNDWGQLGHGNTKSYTKPSVVKKLKPEKVYMVA 93

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVW 175
            GR+HT+  TE G+  +FG    GQLG G   +   P  +  L V +    ACG+DF+  
Sbjct: 94  CGRNHTIAATESGHLYSFGCGGDGQLGHGDAEDSHVPKIIEGLDVQKYKHLACGSDFSAA 153

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           ++  E   +   G    GQ G G D E  T     +L    + R              V+
Sbjct: 154 IT--ENGELYTWGSCGEGQNGLGEDTEIPT-----RLHLHGKVR-------------MVS 193

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISA-G 293
           CG  H   V   G +Y  G    G+LG   EQ D          Q+   +  + V++A G
Sbjct: 194 CGYYHMAVVTEDGSLYMCGEKEGGKLGLDHEQLD-----NTSQLQKIKSIEDQVVVAACG 248

Query: 294 SVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFV 345
           +  ++     G +Y +G+       L ++  +  +P+ +        R +  G +    +
Sbjct: 249 AEFTAVVTKNGSVYTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVI 308

Query: 346 GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
               +  ++G  ++G+LG G     ++  P+KV       V  V CG  H LV
Sbjct: 309 TKHGNLYTFGDGRHGKLGLGDECFSNTFKPEKVKRFNNFTVKMVTCGGCHMLV 361



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 7/141 (4%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G L  CG      +G     LD    + ++L+ +  ++ + V A C +     V   G  
Sbjct: 206 GSLYMCGEKEGGKLGLDHEQLD----NTSQLQKIKSIEDQVVVAACGAEFTAVVTKNGSV 261

Query: 80  YTWGRNERGQLGHGDK-IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           YT+G+  +GQLG G   ++ + P  +    K K +    G S T V+T+ GN   FG  +
Sbjct: 262 YTFGQGNQGQLGLGSSMMETEFPERIPLFEKVKARTVSCGESFTAVITKHGNLYTFGDGR 321

Query: 139 HGQLGSGS--IRNEIEPSPVR 157
           HG+LG G     N  +P  V+
Sbjct: 322 HGKLGLGDECFSNTFKPEKVK 342


>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
 gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
 gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1044

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 162/380 (42%), Gaps = 49/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+  +A  C + H      +G  +TWG    G+LGHG      RP 
Sbjct: 243 DVLIPKPLESDVVLDVNQIA--CGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  LS   +     G  HT  VT  G+   +G   +  G LG G+  +   P  V   +
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG+    W S++  +S  +   G   +G LGHG D E         LAY  
Sbjct: 361 EGLQVLSVACGS----WHSALTTSSGKLYTFGDGTFGVLGHG-DRE--------TLAY-- 405

Query: 217 QPRPRAIAALAGETIVKVACG----------TNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
              P+ + AL+G   +KVACG          TN T A      +YTWG G   RLGH ++
Sbjct: 406 ---PKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDK 462

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
           +   VP+ V      N       ++ G   +   A  G+++       G+L N   D   
Sbjct: 463 EPRLVPKCVQALLEYNF----HQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQ 518

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D L+   +  +  G  H   + + S   +WG    G LG+G    K    P  V+
Sbjct: 519 PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL--KDRKKPCLVE 576

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S++CG   +  I
Sbjct: 577 ALKDRHVKSISCGSNFTTCI 596



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 88/195 (45%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACGT H      +G V+TWG    GRLGH    D   P+ V+   
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDD---WMYPKPLMDLSG 330
              V     +IS G  ++      G L+ WG    N      G +   W+  K    L G
Sbjct: 307 LTVV----DLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   +++ A PK+V+ L G   I V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG--DRETLAYPKEVEALSGFKTIKV 420

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  HS  IV+ TN
Sbjct: 421 ACGIWHSAAIVEVTN 435


>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
          Length = 2427

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 128/277 (46%), Gaps = 23/277 (8%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           A + + ++P  ++ L   +I  +AA     H +A+   G  Y+WG  + G+LGHGD +  
Sbjct: 476 AYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPL 535

Query: 99  DRPTIVSELSKYKIKK----AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           + P ++S  S  +  K       G +++  +T +G    +G   +G+LG GS  +E  P 
Sbjct: 536 EEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPM 595

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            V  L   +V   ACG+     L+  E   + + G   YG+LG G  +   T        
Sbjct: 596 LVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKT-------- 647

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
                 P+ I  L    +VKV CG+  ++A+   G VY+WG G   RLGH  ++    P+
Sbjct: 648 ------PKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPK 701

Query: 274 RVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++  Q   V+     ++AGS +        +++ WG
Sbjct: 702 LLEGLQGKKVID----VAAGSTHCLALTEDSEVHSWG 734



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 105/226 (46%), Gaps = 33/226 (14%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL----AGETIVKVACGTNHTVAVDSKG 248
           G+LGHG          +V L       P+ I+A     AG+ +V +ACG+ ++ A+ ++G
Sbjct: 525 GRLGHG---------DTVPLE-----EPKVISAFSGKQAGKHVVHIACGSTYSAAITAEG 570

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            +YTWG G YGRLGH   +DE +P  V   +   V+  +    +G   +      GQ++ 
Sbjct: 571 ELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKGLKVI--DVACGSGDAQTLAVTENGQVWS 628

Query: 309 W-----GKLKNNGDD-WMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
           W     GKL   G D    PK    L DL    +RC    ++   +  D    SWG    
Sbjct: 629 WGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIA--LTKDGQVYSWGKGDN 686

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             LG+G   ++    PK ++ L+G  VI VA G  H L + + + V
Sbjct: 687 QRLGHG--TEEHVRYPKLLEGLQGKKVIDVAAGSTHCLALTEDSEV 730



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 54/236 (22%), Positives = 86/236 (36%), Gaps = 59/236 (25%)

Query: 220 PRAIAALAGETIVKVACGT----------------------------------------- 238
           P     LA   + ++AC                                           
Sbjct: 442 PIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAH 501

Query: 239 ---NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
              +H +A+ + G VY+WG G  GRLGH +      P+ +  F           I+ GS 
Sbjct: 502 SDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGST 561

Query: 296 NSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMD----SGNMHHFV 345
            S+     G+LY WG+         + +D   P  +  L G  L+ +D    SG+     
Sbjct: 562 YSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGLKG--LKVIDVACGSGDAQTLA 619

Query: 346 GADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             ++  + SWG   YG+LG G  G      PK ++ L+ + V+ V CG   S+ + 
Sbjct: 620 VTENGQVWSWGDGDYGKLGRG--GSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALT 673



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 57/261 (21%), Positives = 105/261 (40%), Gaps = 41/261 (15%)

Query: 4   LEAEKMVEEETGKEKGGEL--LFCGSTCWDAV--------------GRRKGALDGNLVSP 47
           LE  K++   +GK+ G  +  + CGST   A+              GR       +   P
Sbjct: 535 LEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIP 594

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
             +  L G+ +  VA G      +AV   G+ ++WG  + G+LG G       P ++ +L
Sbjct: 595 MLVAGLKGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKL 654

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
               + K   G   ++ +T+DG   ++G   + +LG G+  +      VR          
Sbjct: 655 QDLDVVKVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEH------VR---------- 698

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY-----EAQPRPRA 222
               +   L  ++G  +++        L    D+E ++  S+ +  +       +P P A
Sbjct: 699 ----YPKLLEGLQGKKVIDVAAGSTHCLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAA 754

Query: 223 IAALAGETIVKVACGTNHTVA 243
           +  L  + IV +ACG   + A
Sbjct: 755 LPGLDTKHIVGIACGPAQSFA 775


>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
 gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
          Length = 435

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 29/274 (10%)

Query: 49  RLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           + +P V   I+ V  A     H +A+   G  YTWG    G LGHG   +   P ++   
Sbjct: 125 QYKPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGP 184

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQLGSGS--IRNE---IEPSPVRCLVS 161
            K +I    AG SHT  VTE G    +G ++  G+LG G+  I +E     P+ V+ L  
Sbjct: 185 WKDRIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV 244

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQPRP 220
            +    CG  FT+ L+  +   + + G     +LGHGT  N +               +P
Sbjct: 245 PIALVYCGGFFTMALT--KSGQLWSWGGNANHELGHGTRANNW---------------KP 287

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + +AAL   T+V+VACG  H  A+   G V TWG+GG G+LGH   ++   P  V+    
Sbjct: 288 KVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMAD 347

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                    I+ G   ++     G LY WGK ++
Sbjct: 348 KTC----TYIACGPAWTAAITENGDLYTWGKNRD 377



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 148/359 (41%), Gaps = 52/359 (14%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL----------------SKYKIKKAGA-- 117
           E   + WGR   GQ+GHG +     P ++S L                +K ++   G   
Sbjct: 34  ELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G  H+V+  E  +   +G    G+LG  +  N+ +P  V   +  V   + G    + L+
Sbjct: 94  GLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPY-VNPRIKRVQMASAGGLHNIALT 151

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            V   ++   G   +G LGHG+              YE +  PR +     + IV V+ G
Sbjct: 152 EV--GNVYTWGYGAFGALGHGS--------------YERELLPRLLEGPWKDRIVHVSAG 195

Query: 238 TNHTVAVDSKGYVYTWGFG-GYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            +HT AV   G +YTWG   G GRLGH   +  DE    R    Q  +V  P A++  G 
Sbjct: 196 GSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV--PIALVYCGG 253

Query: 295 VNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVG 346
             +      GQL+ WG   N+        ++W  PK +  L    L  +  G  H   + 
Sbjct: 254 FFTMALTKSGQLWSWGGNANHELGHGTRANNWK-PKVVAALEDVTLVQVACGGFHAAALT 312

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            D   I+WG+   G+LG+G    ++   P  V+ +       +ACG   +  I +  ++
Sbjct: 313 QDGKVITWGYGGNGQLGHGTL--ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 96/208 (46%), Gaps = 13/208 (6%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +G L  PT+++ L   D+      C     +A+   G+ ++WG N   +LGHG +    +
Sbjct: 230 EGALSRPTKVQAL---DVPIALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWK 286

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P +V+ L    + +   G  H   +T+DG  + +G+  +GQLG G++ N  EP+ V  + 
Sbjct: 287 PKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMA 346

Query: 161 SEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +  T  ACG  +T  ++  E   +   G  +  QLG     +       V+        
Sbjct: 347 DKTCTYIACGPAWTAAIT--ENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQF------- 397

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
           P+A+       ++ V+CG NH V + S+
Sbjct: 398 PQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 93/218 (42%), Gaps = 24/218 (11%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRD-----RPTIVSELSKYKI 112
           R V       H  AV   G  YTWGR+E  G+LGHG+    D     RPT V  L    I
Sbjct: 188 RIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPI 246

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
                G   T+ +T+ G   ++G N + +LG G+  N  +P  V  L    +   ACG  
Sbjct: 247 ALVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGF 306

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
               L+  +   ++  G    GQLGHGT               E    P  + A+A +T 
Sbjct: 307 HAAALT--QDGKVITWGYGGNGQLGHGT--------------LENGKEPAIVEAMADKTC 350

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
             +ACG   T A+   G +YTWG     +LG    KDE
Sbjct: 351 TYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388


>gi|147822080|emb|CAN63618.1| hypothetical protein VITISV_038963 [Vitis vinifera]
          Length = 653

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 45/280 (16%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ V+A     H VAV   G  YTWG    G+LGH +  I   +  +++
Sbjct: 178 PCKVDSLHGTFIKSVSAA--KFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   ++K   A + HTVV TE G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S++ A A     T  +S  E   +   G  + GQLG+GT N  +               
Sbjct: 296 KSKIVAVAAANKHTAVIS--ESGEVFTWGCNKKGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+ +  VA    HT+ + + G ++TW        GHR       PRRV +  
Sbjct: 342 PRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTW--------GHRLV----TPRRVVIVR 389

Query: 278 -FQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMW 309
             ++N   P +         I+AG V+S      G ++ W
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYW 429



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 17/196 (8%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
           Q  P  + +L G  I  V+    H+VAV ++G VYTWGFG  GRLGH E      Q    
Sbjct: 175 QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVI 234

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKP 324
            PR+V +   +  +     I+A   ++     GG+++ WG  +       + D    P+ 
Sbjct: 235 TPRQVTMGLGSRRV---KAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRR 291

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
           +  L    +  + + N H  V ++S    +WG  + G+LGYG     S+  P+ V+ L+G
Sbjct: 292 VSSLKS-KIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKG 350

Query: 384 MHVISVACGYGHSLVI 399
             +  VA    H++V+
Sbjct: 351 KVLKGVAAAKYHTIVL 366



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 27/244 (11%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G+   +  P  V  L    IK   A + H+V V+  G    +
Sbjct: 152 VATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+ + G+LG             I P  V   +      A  A     + + EG  +   G
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWG 271

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + GQLG      Y + D+        QP PR +++L  + IV VA    HT  +   G
Sbjct: 272 SNREGQLG------YTSVDT--------QPIPRRVSSLKSK-IVAVAAANKHTAVISESG 316

Query: 249 YVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            V+TWG    G+LG+        + PR V+ + +  VL     ++A   ++      G++
Sbjct: 317 EVFTWGCNKKGQLGYGTSNSASNYTPRVVE-YLKGKVLKG---VAAAKYHTIVLGADGEI 372

Query: 307 YMWG 310
           + WG
Sbjct: 373 FTWG 376



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 33/295 (11%)

Query: 124 VVTEDGNSLA---FGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
           VV  + +S+A   F W    + QLG+G+   +  P  V  L      +   A F     S
Sbjct: 144 VVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVS 203

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACG 237
             G  +   G  + G+LGH   + ++ + + +         PR +    G   VK +A  
Sbjct: 204 ARG-EVYTWGFGRGGRLGHPEFDIHSGQAAVIT--------PRQVTMGLGSRRVKAIAAA 254

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            +HTV     G V+TWG    G+LG+     + +PRRV   +   V      ++A + ++
Sbjct: 255 KHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-----AVAAANKHT 309

Query: 298 SCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GAD 348
           +  +  G+++ WG  K        +N      P+ +  L G  L+ + +   H  V GAD
Sbjct: 310 AVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGAD 369

Query: 349 SSCISWGH--AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +WGH       +      +K+ + P K    + +HV+S+A G  HS+ + +
Sbjct: 370 GEIFTWGHRLVTPRRVVIVRNLKKNGSTPLKFH--QRLHVVSIAAGMVHSMALTE 422


>gi|145494340|ref|XP_001433164.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124400281|emb|CAK65767.1| unnamed protein product [Paramecium tetraurelia]
          Length = 401

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 168/386 (43%), Gaps = 56/386 (14%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           GN +S    + +   ++ FVA  C S    A+D  G+ YTWGR++ G LG+G     + P
Sbjct: 46  GNSISQYSPQLVPIQNVLFVA--CKSSVSAAIDKSGKLYTWGRSKFGLLGNGQVENINIP 103

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-------SIRNEIE-- 152
           T+V  L     K    G  H   +T DG    +G   HG+LG           R + E  
Sbjct: 104 TLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGNQDHGKLGHSFDNLAKLPSREKYEYQ 163

Query: 153 --------PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
                   P  V+ L  +V   + G  FT+ LS  +  ++ + GL + G LG+ T N   
Sbjct: 164 KNLGSAKLPELVK-LNFKVHQVSLGDQFTLILS--DDGNVYSVGLNKKGILGYETKN--- 217

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
               + +L++      + I+ L  + I+++  GT+ +VA+DS G ++ WG   +G+LG  
Sbjct: 218 ----AEELSF------KQISNL--KNIIQIDSGTDFSVALDSDGNMFAWGSNYFGQLGTP 265

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM---- 320
                  P  +   Q+   LP     S G       +  G LY WG     GD  +    
Sbjct: 266 S------PSVIQTPQQIKGLPKIKQFSCGEQFIGALSADGVLYTWGF---GGDGQLGTPS 316

Query: 321 ---YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQK-SSAMPK 376
               P P       N+  +  G  H  + +++     G  + G+LG G   +  +S+   
Sbjct: 317 KQDIPTPHKISFDHNIDKVSCGQAHVGIISNNKLYMHGRGKEGQLGRGSETESPNSSRYS 376

Query: 377 KVDILEGMHVISVACGYGHSLVIVDR 402
            + +LE  +V+ +ACG  HS  IV++
Sbjct: 377 PLLVLE--NVLKIACGGSHSFAIVNQ 400



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 31/184 (16%)

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           V S+  +Y WG+  +G+LG      ++ P+ V +    NVL     ++  S  S+     
Sbjct: 26  VFSQEQLYAWGWNNFGQLGIGNSISQYSPQLVPI---QNVL----FVACKSSVSAAIDKS 78

Query: 304 GQLYMWGK----LKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGH 356
           G+LY WG+    L  NG  ++   P  +  L   + + +  GN H   +  D    +WG+
Sbjct: 79  GKLYTWGRSKFGLLGNGQVENINIPTLVECLKHLDFKYVACGNYHMAAITRDGQLYTWGN 138

Query: 357 AQYGELGYG-------PYGQK--------SSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             +G+LG+        P  +K        S+ +P+ V +   +H +S+  G   +L++ D
Sbjct: 139 QDHGKLGHSFDNLAKLPSREKYEYQKNLGSAKLPELVKLNFKVHQVSL--GDQFTLILSD 196

Query: 402 RTNV 405
             NV
Sbjct: 197 DGNV 200


>gi|308799813|ref|XP_003074688.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116000858|emb|CAL50538.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 604

 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 175/415 (42%), Gaps = 91/415 (21%)

Query: 61  VAAGCVSCHCVAVDVEG-----RCYTWGRNERGQLGHGDKIQRDRPTIV---SELSK--- 109
           V+ G     CV  D EG        T+GR   GQLG G       P  V    EL++   
Sbjct: 142 VSLGQFHTACVVTDAEGDKVGTTIATFGRGFHGQLGLGSYDNHAAPAFVRMGDELARGHD 201

Query: 110 ------YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVRCLV-- 160
                   +     G SH V ++ DG  +++G    G+LG +G+   E+   P R  V  
Sbjct: 202 SDDEHFEGVDSIALGGSHCVALSRDGGVISWGLASSGELGYTGNTPIEVN-VPRRVFVGI 260

Query: 161 ---SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
              +++T    G++ T+ +   E   +   G  ++GQLGHGT               +A 
Sbjct: 261 DICTKITQVTTGSNHTMAID--EFGRLFACGRGRHGQLGHGT-------------FRDAA 305

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-------DEW 270
           P  R + AL G  +V   CG +H+V + S G V+ WG   YG+LG  +         +  
Sbjct: 306 PFSR-VEALKGMHVVSAVCGGSHSVCITSDGNVWAWGDCRYGQLGLGDLTFAAAAGWNNG 364

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG-----DDWMYPKPL 325
           VP    V   N++  P A +SAG  +S     GG++++ G+ K+       + ++   P 
Sbjct: 365 VPWPCLVESLNDMDEPVASVSAGGAHSIFVTAGGRMFVCGRGKHGALGVGKNPFLTIGPP 424

Query: 326 MDLSGWNLRCMDSGNMHHFV----------------------------GADSSC------ 351
               G N    ++ N+HHFV                            GA  SC      
Sbjct: 425 TSACG-NRLTPEAVNIHHFVRRADGSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACG 483

Query: 352 --ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
              + G   YG+LG+G   +KS+ +  +V+ L G  VI+VA G+ H+  +V+ T+
Sbjct: 484 GVFTTGENSYGQLGHGD--KKSTFVFTRVEALRGKRVITVASGHNHTGAMVENTD 536



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 122/296 (41%), Gaps = 39/296 (13%)

Query: 51  RPLVGVDI--RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS 108
           R  VG+DI  +       S H +A+D  GR +  GR   GQLGHG        + V  L 
Sbjct: 255 RVFVGIDICTKITQVTTGSNHTMAIDEFGRLFACGRGRHGQLGHGTFRDAAPFSRVEALK 314

Query: 109 KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-------NEIEPSPVRCLVS 161
              +  A  G SH+V +T DGN  A+G  ++GQLG G +        N   P P  CLV 
Sbjct: 315 GMHVVSAVCGGSHSVCITSDGNVWAWGDCRYGQLGLGDLTFAAAAGWNNGVPWP--CLVE 372

Query: 162 E-------VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
                   V + + G   ++++++  G  +   G  ++G LG G +        +     
Sbjct: 373 SLNDMDEPVASVSAGGAHSIFVTA--GGRMFVCGRGKHGALGVGKNPFLTIGPPTSACGN 430

Query: 215 EAQPRP--------RAIAALAGETIVKVACGTNHTVAVDSKGY-----------VYTWGF 255
              P          RA  ++    + + +CG    VAV + G            V+T G 
Sbjct: 431 RLTPEAVNIHHFVRRADGSVDQNRVQQCSCGPRCRVAVAAAGATHSCCLTACGGVFTTGE 490

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
             YG+LGH ++K  +V  RV+  +   V+   +  +        T G   LY WG+
Sbjct: 491 NSYGQLGHGDKKSTFVFTRVEALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGR 546



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 112/291 (38%), Gaps = 76/291 (26%)

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR------- 100
           +R+  L G+ +  V+A C   H V +  +G  + WG    GQLG GD             
Sbjct: 308 SRVEALKGMHV--VSAVCGGSHSVCITSDGNVWAWGDCRYGQLGLGDLTFAAAAGWNNGV 365

Query: 101 --PTIVSELSKYK--IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG----------- 145
             P +V  L+     +    AG +H++ VT  G     G  KHG LG G           
Sbjct: 366 PWPCLVESLNDMDEPVASVSAGGAHSIFVTAGGRMFVCGRGKHGALGVGKNPFLTIGPPT 425

Query: 146 -SIRNEIEPSPV-------------------------RCLVSEVTATACGADFTVWLSSV 179
            +  N + P  V                         RC    V   A GA  +  L++ 
Sbjct: 426 SACGNRLTPEAVNIHHFVRRADGSVDQNRVQQCSCGPRC---RVAVAAAGATHSCCLTAC 482

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
            G  +   G   YGQLGHG     + K + V    EA         L G+ ++ VA G N
Sbjct: 483 GG--VFTTGENSYGQLGHG-----DKKSTFVFTRVEA---------LRGKRVITVASGHN 526

Query: 240 HTVAV----DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
           HT A+    D    +YTWG G +G+LG    +    P+ V  F   NV PP
Sbjct: 527 HTGAMVENTDGSNSLYTWGRGDWGQLGTGNMRSYTTPQEVKGF---NVAPP 574



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 8/129 (6%)

Query: 33  VGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH 92
           V R  G++D N V      P   V +   AAG  + H   +   G  +T G N  GQLGH
Sbjct: 443 VRRADGSVDQNRVQQCSCGPRCRVAV--AAAG--ATHSCCLTACGGVFTTGENSYGQLGH 498

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE--DGNSLAFGWNKH--GQLGSGSIR 148
           GDK      T V  L   ++    +G +HT  + E  DG++  + W +   GQLG+G++R
Sbjct: 499 GDKKSTFVFTRVEALRGKRVITVASGHNHTGAMVENTDGSNSLYTWGRGDWGQLGTGNMR 558

Query: 149 NEIEPSPVR 157
           +   P  V+
Sbjct: 559 SYTTPQEVK 567



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 71/311 (22%), Positives = 110/311 (35%), Gaps = 113/311 (36%)

Query: 104 VSELSKYKIKKAGAGRSHTVVVTED------GNSLA-FGWNKHGQLGSGSIRNEIEPSPV 156
           VSE ++        G+ HT  V  D      G ++A FG   HGQLG GS  N   P+ V
Sbjct: 131 VSEQAERASANVSLGQFHTACVVTDAEGDKVGTTIATFGRGFHGQLGLGSYDNHAAPAFV 190

Query: 157 RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
           R +  E+                                GH +D+E+             
Sbjct: 191 R-MGDELA------------------------------RGHDSDDEHF------------ 207

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRR 274
                       E +  +A G +H VA+   G V +WG    G LG+      +  VPRR
Sbjct: 208 ------------EGVDSIALGGSHCVALSRDGGVISWGLASSGELGYTGNTPIEVNVPRR 255

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLR 334
           V  F   ++      ++ GS ++      G+L+  G+                       
Sbjct: 256 V--FVGIDICTKITQVTTGSNHTMAIDEFGRLFACGR----------------------- 290

Query: 335 CMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
                                  ++G+LG+G +  + +A   +V+ L+GMHV+S  CG  
Sbjct: 291 ----------------------GRHGQLGHGTF--RDAAPFSRVEALKGMHVVSAVCGGS 326

Query: 395 HSLVIVDRTNV 405
           HS+ I    NV
Sbjct: 327 HSVCITSDGNV 337


>gi|449484006|ref|XP_004156756.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101206334
           [Cucumis sativus]
          Length = 1084

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 149/370 (40%), Gaps = 57/370 (15%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ V+A     H VAV   G+ YTWG    G+LGH D  I   +  +++
Sbjct: 178 PCKIDSLHGSSIKLVSAS--KFHSVAVSACGQVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   +++   A + HTV+ TE G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVIFGLGSRRVRAIAAAKHHTVIATEGGEVFTWGSNREGQLGYTSVDTQPTPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S++   A     T  +S  E   I   G  + GQLG+GT N  +               
Sbjct: 296 RSKIVDVAAANKHTAVVS--ESGEIFTWGCNREGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR----LGHREQKDEWVPRRV 275
           PR +  L G+   +VA    HT+ +   G VYTWG          +    +K    P + 
Sbjct: 342 PRVVEYLKGKVFARVAAAKFHTICLGVDGEVYTWGHRLVTPRRVVIARNLKKSGNTPLKF 401

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRC 335
              +R +V+     I+AG V+S      G ++ W                 D S  +LRC
Sbjct: 402 HRMKRLHVVN----IAAGMVHSMALTDDGAVFYW-----------------DSSDADLRC 440

Query: 336 MDSGNMHHFVGADSSCISWGH---AQYGELG--YGPYGQKSSAMPKKVDILEGM-HVISV 389
                ++   G D   IS G    A    +G  +   G+     P     L G+    SV
Sbjct: 441 Q---QLYSLCGRDVVSISAGKYWIAAVTSIGDVFMWDGKNGKDKPPAATRLHGIKRATSV 497

Query: 390 ACGYGHSLVI 399
           + G  H L++
Sbjct: 498 SVGETHLLIV 507



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 127/337 (37%), Gaps = 74/337 (21%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G++  +  P  +  L    IK   A + H+V V+  G    +
Sbjct: 152 VATELFSWGSGTNYQLGTGNEHIQKLPCKIDSLHGSSIKLVSASKFHSVAVSACGQVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
           G+ + G+LG             I P  V   +    V A A     TV   + EG  +  
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVIFGLGSRRVRAIAAAKHHTVI--ATEGGEVFT 269

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + GQLG+ +               + QP PR +++L  + IV VA    HT  V  
Sbjct: 270 WGSNREGQLGYTS--------------VDTQPTPRRVSSLRSK-IVDVAAANKHTAVVSE 314

Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            G ++TWG    G+LG+        + PR V+ + +  V    A ++A   ++ C    G
Sbjct: 315 SGEIFTWGCNREGQLGYGTSNSASNYTPRVVE-YLKGKVF---ARVAAAKFHTICLGVDG 370

Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
           ++Y WG                               H  V      I+           
Sbjct: 371 EVYTWG-------------------------------HRLVTPRRVVIARNL-------- 391

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +KS   P K   ++ +HV+++A G  HS+ + D
Sbjct: 392 ----KKSGNTPLKFHRMKRLHVVNIAAGMVHSMALTD 424


>gi|356544020|ref|XP_003540454.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
           max]
          Length = 485

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/321 (27%), Positives = 136/321 (42%), Gaps = 28/321 (8%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
           H   V   G  +T G N     GH D  +   RP +V  L     K+  AG + TV +T 
Sbjct: 174 HAAFVMQSGEVFTCGDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTR 233

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
            G+    G N HGQLG G  ++   P  +  L S V   A G  +   LS  E  ++ + 
Sbjct: 234 QGHVYTCGTNTHGQLGHGDTQDRPTPKMIEVL-SSVVQIAAGPSYI--LSVTENGTVYSF 290

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G      LGHG  ++            E QPRP       G  IV+V+ G  H VA+DS 
Sbjct: 291 GSGANFCLGHGEQHD------------ELQPRPIQKFRRKGIHIVRVSAGDEHAVALDSN 338

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA-------VISAGSVNSSCT 300
           G+VYTWG G  G LGH ++ ++  P  +   +    +   A       ++++GSV    +
Sbjct: 339 GFVYTWGKGYCGALGHGDEIEKTTPELLTSLKNQLAVQVCARKRKTFVLVNSGSVYGFGS 398

Query: 301 AGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQY 359
            G G L      +   D  + P+ L  L   ++  + +G  H  V  +      +G  + 
Sbjct: 399 MGFGSLGFLD--RRVSDKVLKPRILDTLRAHHVSQISTGLYHTVVITSRGQIFGFGDNER 456

Query: 360 GELGYGPYGQKSSAMPKKVDI 380
            +LG+     +S   P ++ I
Sbjct: 457 AQLGHDTL--RSCLEPTQIFI 475


>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101222790 [Cucumis sativus]
          Length = 982

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 156/381 (40%), Gaps = 54/381 (14%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D+  +A  C   H V V  +G  ++WG    G+LGHG +     P I+  
Sbjct: 281 PKALESTVVLDVHGIA--CGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKIIDT 338

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--E 162
           LS   ++    G  HT  VT  G+   +G   H  G LG GS  +   P  V   +    
Sbjct: 339 LSGTNVELVACGEYHTCAVTLSGDLYTWGDGTHNYGLLGHGSEVSHWIPQKVGGQMEGIR 398

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+  +CGA  T  ++S     +   G   +G LGHG     N               PR 
Sbjct: 399 VSYISCGAWHTAVVTS--AGQLFTFGDGSFGALGHGDHITSNF--------------PRE 442

Query: 223 IAALAGETIVKVACGTNHTVAV---------------DSKGYVYTWGFGGYGRLGHREQK 267
           +  L G    KVACG  HT A                 S   +YTWG G  GRLGH + +
Sbjct: 443 VETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNE 502

Query: 268 DEWVPRRVDVFQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWM 320
              VP  V       +           A+ +AG V +  +   GQL   G    NG    
Sbjct: 503 PRLVPECVAALIEERICQVACGNDLTVALTTAGRVYTMGSTAYGQL---GSATANGK--- 556

Query: 321 YPKPLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
            P  +  +++   +  +  G+ H   + + +   +WG    G+LG+G    +++  P  V
Sbjct: 557 LPTCVEGEIANSFVEEVACGSYHVAVLTSKNEVYTWGKGLNGQLGHGDNNHRNT--PTIV 614

Query: 379 DILEGMHVISVACGYGHSLVI 399
           D+L+   V +VACG   ++VI
Sbjct: 615 DVLKDKQVKNVACGSKFTVVI 635


>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Cricetulus griseus]
          Length = 1057

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y+WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P      +  K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYSWGLDSDGQLGLL 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEEY------IRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  VACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 138/326 (42%), Gaps = 33/326 (10%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V V  +G  YT G N+ GQLGH  +  R +P  V  L    I     G +HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
           + + + G   ++G +  GQLG       I  P  ++ L   ++   ACG   ++ LS  +
Sbjct: 97  LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
            + +   G  +YGQLG G D              + Q  P+ I +L G   ++VA G  H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
           +  +   G ++ WG   +G+LG  ++ D +VP  +   +   ++          A+   G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
            V +    G GQL       N+    + P+ + +L G  +  +  G  H   FV +    
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
            S+G    G+LG G    + S    K
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 298 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 76/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR     A + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          SWG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------SWGLDSDGQLGLLG-SEEY 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD 51


>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
          Length = 1263

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/259 (31%), Positives = 122/259 (47%), Gaps = 25/259 (9%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGR 119
           +   C   H +A+   G  + WG+N  GQLG G        P +V  LS   + +  AG+
Sbjct: 380 IQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQISAGK 439

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H++ ++  GN  ++G N  GQLG G    E  PS +  L ++ V   ACG   T  L+ 
Sbjct: 440 AHSMALSMSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLT- 498

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            +   +   G  +YGQLGH  T NE                RPR +  LAG  + +VACG
Sbjct: 499 -KDGLVFTFGAGKYGQLGHNSTQNEL---------------RPRLVTELAGNRVTQVACG 542

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             HT+A V   G V+++G G  G+LG+    ++ +P  + +   N  L  E+  S   + 
Sbjct: 543 RWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL-PSNEELKFESRTSEKEL- 600

Query: 297 SSCTAGGGQ-LYMWGKLKN 314
               AGG Q + +W   KN
Sbjct: 601 -IMIAGGNQSILLWMGKKN 618



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 11/217 (5%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G L  ++ +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 394 KGGELFAWGQNLHGQLG--VGRLFTSIPTPQLVEHLSGVPLVQISAG--KAHSMALSMSG 449

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WGRN+ GQLG G     D P+++  L   K++    G SHT ++T+DG    FG  
Sbjct: 450 NIYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLACGGSHTALLTKDGLVFTFGAG 509

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           K+GQLG  S +NE+ P  V  L  + VT  ACG   T+   S  G  + + G  + GQLG
Sbjct: 510 KYGQLGHNSTQNELRPRLVTELAGNRVTQVACGRWHTLAYVSDLG-KVFSFGSGKEGQLG 568

Query: 197 H-GTDNEY----NTKDSSVKLAYEAQPRPRAIAALAG 228
           + GT N+         S+ +L +E++   + +  +AG
Sbjct: 569 NGGTHNQLIPLPMKLPSNEELKFESRTSEKELIMIAG 605



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 14/177 (7%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           L +  I +   G  H++ +++ G   A+G N HGQLG G +   I    +   +S V   
Sbjct: 374 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTSIPTPQLVEHLSGVPLV 433

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
              A     ++     +I + G    GQLG G  N               +  P  I AL
Sbjct: 434 QISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTN--------------GEDFPSLIEAL 479

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             + +  +ACG +HT  +   G V+T+G G YG+LGH   ++E  PR V     N V
Sbjct: 480 DNQKVEFLACGGSHTALLTKDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGNRV 536



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 16/184 (8%)

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           L  ++I+++ CG  H++A+   G ++ WG   +G+LG        +P    V   + V  
Sbjct: 374 LQEKSIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRLFTS-IPTPQLVEHLSGV-- 430

Query: 286 PEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGWNLRCMD 337
           P   ISAG  +S   +  G +Y WG+           NG+D  +P  +  L    +  + 
Sbjct: 431 PLVQISAGKAHSMALSMSGNIYSWGRNDLGQLGLGHTNGED--FPSLIEALDNQKVEFLA 488

Query: 338 SGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
            G  H   +  D    ++G  +YG+LG+     ++   P+ V  L G  V  VACG  H+
Sbjct: 489 CGGSHTALLTKDGLVFTFGAGKYGQLGHN--STQNELRPRLVTELAGNRVTQVACGRWHT 546

Query: 397 LVIV 400
           L  V
Sbjct: 547 LAYV 550


>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
           [Zea mays]
          Length = 1009

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 162/380 (42%), Gaps = 47/380 (12%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
            +++ P  L   V +D++ +A G    H      +G  + WG    G+LGHG      RP
Sbjct: 229 ADILIPKPLESDVVLDVQQIACGYR--HIALTTRQGEVFAWGEELGGRLGHGTDADISRP 286

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCL 159
            +V  L+   ++    G  HT  +T  G+   +  G+   G LG G+  +   P  V   
Sbjct: 287 KLVEALAVSNVEYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGP 346

Query: 160 VS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           +   +V + +CG+    W S++  +S  +   G   +G LGHG  +          +AY 
Sbjct: 347 LEGVQVLSVSCGS----WHSALTTSSGKVFTFGDGTFGALGHGNRH---------TVAY- 392

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV----DSKGY------VYTWGFGGYGRLGHRE 265
               P+ +  L+G   +KVACG  H+ A+    +  G       ++TWG G    LGH +
Sbjct: 393 ----PKEVETLSGFRTIKVACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGD 448

Query: 266 QKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW----GKLKNNGDDWMY 321
           +    VP  V      N      V    S+  + +  G    M     G+L N   D  +
Sbjct: 449 KDARLVPTCVQSLIDYNF---HQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKH 505

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P P+ D L+G  +  +  G+ H   + + S   +WG    G LG+G  G +    P  V+
Sbjct: 506 PTPVQDRLAGELVEEISCGSCHVAVLTSRSEVYTWGMGANGRLGHG--GVEDKKKPTLVE 563

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S+ACG   +  I
Sbjct: 564 ALKDRHVKSIACGSNFTTCI 583



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACG  H      +G V+ WG    GRLGH    D   P+ V+   
Sbjct: 234 PKPLESDVVLDVQQIACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA 293

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
            +NV      ++ G  ++      G LY WG    N            W+  +    L G
Sbjct: 294 VSNV----EYVACGEFHTCAITASGDLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEG 349

Query: 331 WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S    ++G   +G LG+G   + + A PK+V+ L G   I V
Sbjct: 350 VQVLSVSCGSWHSALTTSSGKVFTFGDGTFGALGHG--NRHTVAYPKEVETLSGFRTIKV 407

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  HS  IV+ TN
Sbjct: 408 ACGLWHSAAIVETTN 422



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G +   GS+    +G  K   DG   +P + R L G  +  ++  C SCH   +      
Sbjct: 483 GHVFTMGSSSNGQLGNPKS--DGKHPTPVQDR-LAGELVEEIS--CGSCHVAVLTSRSEV 537

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVV 125
           YTWG    G+LGHG    + +PT+V  L    +K    G + T  +
Sbjct: 538 YTWGMGANGRLGHGGVEDKKKPTLVEALKDRHVKSIACGSNFTTCI 583


>gi|356571739|ref|XP_003554031.1| PREDICTED: uncharacterized protein LOC100800604 [Glycine max]
          Length = 1061

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 121/283 (42%), Gaps = 49/283 (17%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ ++AG    H VA+   G  YTWG    G+LGH D  I   +  +++
Sbjct: 178 PCKVDSLGGSFIKLISAG--KFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   ++   GA + H V+ T+ G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S + A A     T  +S +    +   G  + GQLG+GT N  +               
Sbjct: 296 RSRIVAVAAANKHTAVVSDL--GEVFTWGCNREGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR + +L G+T+ +V+    HT+ + S G V+TW        GHR       P+RV V  
Sbjct: 342 PRVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTW--------GHR----LVTPKRVVVSR 389

Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
                      F R   L     I+AG V+S      G L+ W
Sbjct: 390 NLKRSGSTLLKFHRKERL-SVVSIAAGMVHSMALTDDGALFYW 431



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 27/244 (11%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G+   +  P  V  L    IK   AG+ H+V +T  G    +
Sbjct: 152 VATEVFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+ + G+LG             I P  V   +      A GA     + + +G  +   G
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIGAAKHHMVIATQGGEVFTWG 271

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + GQLG+ +               + QP PR +++L    IV VA    HT  V   G
Sbjct: 272 SNREGQLGYPS--------------VDTQPTPRRVSSLRSR-IVAVAAANKHTAVVSDLG 316

Query: 249 YVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            V+TWG    G+LG+        + PR V+  +   +      +SA   ++      G++
Sbjct: 317 EVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKTL----TRVSAAKYHTIVLGSDGEV 372

Query: 307 YMWG 310
           + WG
Sbjct: 373 FTWG 376



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/218 (27%), Positives = 99/218 (45%), Gaps = 25/218 (11%)

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G GT+ +  T ++ +      Q  P  + +L G  I  ++ G  H+VA+ ++G VYTWGF
Sbjct: 160 GSGTNYQLGTGNAHI------QKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGF 213

Query: 256 GGYGRLGHRE------QKDEWVPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
           G  GRLGH +      Q     PR+V        V+     I A   +      GG+++ 
Sbjct: 214 GRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVM----AIGAAKHHMVIATQGGEVFT 269

Query: 309 WGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGE 361
           WG  +       + D    P+ +  L    +  + + N H  V +D     +WG  + G+
Sbjct: 270 WGSNREGQLGYPSVDTQPTPRRVSSLRS-RIVAVAAANKHTAVVSDLGEVFTWGCNREGQ 328

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           LGYG     S+  P+ V+ L+G  +  V+    H++V+
Sbjct: 329 LGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIVL 366



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 70/299 (23%), Positives = 122/299 (40%), Gaps = 35/299 (11%)

Query: 118 GRSHTVVVTEDGNSLAFGWNK--HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G  H+ V TE      F W    + QLG+G+   +  P  V  L  S +   + G   +V
Sbjct: 146 GNDHSSVATE-----VFSWGSGTNYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSV 200

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-LAGETIVK 233
            L++     +   G  + G+LGH         D  +     A   PR + + L    ++ 
Sbjct: 201 ALTA--RGEVYTWGFGRGGRLGH--------PDFDIHSGQAAVITPRQVTSGLGSRRVMA 250

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
           +    +H V     G V+TWG    G+LG+     +  PRRV   +   V      ++A 
Sbjct: 251 IGAAKHHMVIATQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSLRSRIV-----AVAAA 305

Query: 294 SVNSSCTAGGGQLYMWG-----KL---KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
           + +++  +  G+++ WG     +L    +N      P+ +  L G  L  + +   H  V
Sbjct: 306 NKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPRVVESLKGKTLTRVSAAKYHTIV 365

Query: 346 -GADSSCISWGH--AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
            G+D    +WGH       +      ++S +   K    E + V+S+A G  HS+ + D
Sbjct: 366 LGSDGEVFTWGHRLVTPKRVVVSRNLKRSGSTLLKFHRKERLSVVSIAAGMVHSMALTD 424


>gi|449518441|ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/266 (29%), Positives = 124/266 (46%), Gaps = 29/266 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            +R +A G +  H VA++  G+ +TWG    G LGH    +   P +V    + +IK   
Sbjct: 169 SVRCIALGGL--HSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIA 226

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACG 169
              +HT  +TE G    +G ++                     P  VR L + V A +CG
Sbjct: 227 TSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCG 286

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             FT+ L  V+G  + N G     +LG G +             +E +P P    +L   
Sbjct: 287 GFFTMALG-VDG-KLWNWGANTNFELGRGNNIG----------GWEPKPVP----SLEDT 330

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I+++ CG  H++A+   G V +WG+GG+G+LGH   ++E VPR +D      V     +
Sbjct: 331 PIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRV---SYI 387

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN 315
              GS +++ TA  G+LYMWG  K++
Sbjct: 388 ACCGSSSAAVTA-EGKLYMWGNAKDS 412



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 85/336 (25%), Positives = 129/336 (38%), Gaps = 62/336 (18%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           +  +WGR   GQLG G +  R  P+ V+ LS   I        HT+ +   G   +F  +
Sbjct: 60  QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNI--------HTLALAP-GQLPSFSGD 110

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
                  GS    I      C +   +    G    VW+           G    G+LG 
Sbjct: 111 NQDSGDDGSFELGIS-----CGLFHSSLLVNG---KVWI----------WGKGDGGRLGF 152

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +N       + +L                E++  +A G  H+VA+++ G V+TWG+GG
Sbjct: 153 GHENPVFVPTLNSRL----------------ESVRCIALGGLHSVALNALGQVFTWGYGG 196

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------ 311
           +G LGH     E VPR V+   R  +   + + ++G+  ++ T   G++Y WG+      
Sbjct: 197 FGALGHSVYHRELVPRLVEGSWRGRI---KHIATSGAHTAAITE-SGEVYTWGRDEGDGR 252

Query: 312 -------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
                    N G     P  +  L          G     +G D    +WG     ELG 
Sbjct: 253 LGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGR 312

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G         PK V  LE   +I + CG  HSL + 
Sbjct: 313 G--NNIGGWEPKPVPSLEDTPIIQIVCGGYHSLALT 346



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           G L  P R+R L        A  C     +A+ V+G+ + WG N   +LG G+ I    P
Sbjct: 265 GGLSIPCRVRAL---PAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEP 321

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
             V  L    I +   G  H++ +T DG  L++G+  HGQLG  SI+NE  P  +  L  
Sbjct: 322 KPVPSLEDTPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALAD 381

Query: 162 E-VTATAC 168
           + V+  AC
Sbjct: 382 KRVSYIAC 389



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 130/342 (38%), Gaps = 31/342 (9%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V G+ + WG+ + G+LG G +     PT+ S L    ++    G  H+V +   G    +
Sbjct: 135 VNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGLHSVALNALGQVFTW 192

Query: 135 GWNKHGQLGSGSIRNEIEPSPVR-CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G+   G LG      E+ P  V       +   A     T  ++  E   +   G  +  
Sbjct: 193 GYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAIT--ESGEVYTWGRDEGD 250

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
                       +   + +    +  P  +AA        V+CG   T+A+   G ++ W
Sbjct: 251 GRLGLGPGRGPNEGGGLSIPCRVRALPAPVAA--------VSCGGFFTMALGVDGKLWNW 302

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
           G      LG       W P+ V   +      P   I  G  +S    G G++  W    
Sbjct: 303 GANTNFELGRGNNIGGWEPKPVPSLEDT----PIIQIVCGGYHSLALTGDGKVLSWGYGG 358

Query: 310 -GKLKNNG-DDWMYPKPLMDLSGWNLRCMD-SGNMHHFVGADSSCISWGHAQYGELGYGP 366
            G+L ++   +   P+ +  L+   +  +   G+    V A+     WG+A+  +LG  P
Sbjct: 359 HGQLGHSSIQNEKVPRVIDALADKRVSYIACCGSSSAAVTAEGKLYMWGNAKDSQLGV-P 417

Query: 367 YGQKSSAMPKKV------DILEGMHVISVACGYGHSLVIVDR 402
              +    P +V      D L   HV+SVA G  H++ +V R
Sbjct: 418 GLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLR 459



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 1/104 (0%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D   +   C   H +A+  +G+  +WG    GQLGH        P ++  L+  ++    
Sbjct: 329 DTPIIQIVCGGYHSLALTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVSYIA 388

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
              S +  VT +G    +G  K  QLG   +  E++ SPV  + 
Sbjct: 389 CCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLP-EVQTSPVEVIF 431


>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
           743B]
 gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
           cellulovorans 743B]
          Length = 852

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 149/331 (45%), Gaps = 54/331 (16%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP +++ L G  I  ++AG    H VA+  +G  +TWG    G+LG G    R  P  ++
Sbjct: 77  SPVQVKGLNG--ITAISAGW--AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPIN 132

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L+   I    AG +HT+ +  DG   ++G N++GQLG+G+  N   P  V   +   + 
Sbjct: 133 GLTG--ITAISAGWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQVPGQIGITSI 190

Query: 166 TACGA-------DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           ++ G        D TVW          + G   +GQLG+GT++                P
Sbjct: 191 SSGGGHSLVIKNDGTVW----------SWGCNNFGQLGNGTNSN--------------NP 226

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P  I+ L G  I+ V+ G  H+ A+ S G V+ WG    G L +  + D ++P +    
Sbjct: 227 TPHQISGLNG--IINVSAGVIHSTALKSDGTVWNWGCNFRGELANGNKIDSYIPVQA--- 281

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWN 332
              N L     I+AG   SS     G  ++W     G+L N +  D   P  +  LSG  
Sbjct: 282 ---NGLNGIIAITAGWEFSSAIKSDGTFWVWGVNDYGQLGNGSKSDVTSPMQVSSLSG-- 336

Query: 333 LRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
           +  +D+G  +   +  D +  ++G   YG+L
Sbjct: 337 ITAIDTGATYTVALKTDGNIFAFGENTYGQL 367



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 154/345 (44%), Gaps = 38/345 (11%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           ++A    +   +A+  +G  ++WG N+ G LG G     + P  V  L+   I    AG 
Sbjct: 37  YIAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGLN--GITAISAGW 94

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
           +H V +  DG    +G    G+LG G+      P+P+  L + +TA + G + T+ L + 
Sbjct: 95  AHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGL-TGITAISAGWNHTLALKA- 152

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
              ++ + G  QYGQLG G     NT +S++ L    Q             I  ++ G  
Sbjct: 153 -DGTLWSWGQNQYGQLGTG-----NTTNSNIPLQVPGQIG-----------ITSISSGGG 195

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H++ + + G V++WG   +G+LG+    +   P ++     N ++     +SAG ++S+ 
Sbjct: 196 HSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGL--NGIIN----VSAGVIHSTA 249

Query: 300 TAGGGQLYMW-----GKLKN-NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCI 352
               G ++ W     G+L N N  D   P     L+G  +  + +G      + +D +  
Sbjct: 250 LKSDGTVWNWGCNFRGELANGNKIDSYIPVQANGLNG--IIAITAGWEFSSAIKSDGTFW 307

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            WG   YG+LG G     +S  P +V  L G+  I     Y  +L
Sbjct: 308 VWGVNDYGQLGNGSKSDVTS--PMQVSSLSGITAIDTGATYTVAL 350



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 133/293 (45%), Gaps = 44/293 (15%)

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AG + T+ +  DG   ++G+N++G LG G+  N   P  V+ L + +TA + G    V L
Sbjct: 42  AGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSPVQVKGL-NGITAISAGWAHFVAL 100

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
            S    ++   G+   G+LG GT++   T              P  I  L G  I  ++ 
Sbjct: 101 KS--DGTVWTWGVGYSGELGDGTNSLRTT--------------PAPINGLTG--ITAISA 142

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV----ISA 292
           G NHT+A+ + G +++WG   YG+LG     +  +P +V          P  +    IS+
Sbjct: 143 GWNHTLALKADGTLWSWGQNQYGQLGTGNTTNSNIPLQV----------PGQIGITSISS 192

Query: 293 GSVNSSCTAGGGQLYMWG----KLKNNGDDWMYPKPLMDLSGWN-LRCMDSGNMHHF-VG 346
           G  +S      G ++ WG        NG +   P P   +SG N +  + +G +H   + 
Sbjct: 193 GGGHSLVIKNDGTVWSWGCNNFGQLGNGTNSNNPTP-HQISGLNGIINVSAGVIHSTALK 251

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           +D +  +WG    GEL  G   +  S +P + + L G  +I++  G+  S  I
Sbjct: 252 SDGTVWNWGCNFRGELANG--NKIDSYIPVQANGLNG--IIAITAGWEFSSAI 300



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 19/175 (10%)

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
           + V+ G   T+A+ + G V++WGF   G LG     +   P  V V   N +      IS
Sbjct: 38  IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTSNSNSP--VQVKGLNGI----TAIS 91

Query: 292 AGSVNSSCTAGGGQLYMW-----GKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHHF- 344
           AG  +       G ++ W     G+L +  +     P P+  L+G  +  + +G  H   
Sbjct: 92  AGWAHFVALKSDGTVWTWGVGYSGELGDGTNSLRTTPAPINGLTG--ITAISAGWNHTLA 149

Query: 345 VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           + AD +  SWG  QYG+LG G     +S +P +V    G  + S++ G GHSLVI
Sbjct: 150 LKADGTLWSWGQNQYGQLGTG--NTTNSNIPLQVPGQIG--ITSISSGGGHSLVI 200


>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Cricetulus griseus]
          Length = 1049

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y+WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P      +  K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYSWGLDSDGQLGLL 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEEY------IRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  VACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/326 (26%), Positives = 138/326 (42%), Gaps = 33/326 (10%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V V  +G  YT G N+ GQLGH  +  R +P  V  L    I     G +HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
           + + + G   ++G +  GQLG       I  P  ++ L   ++   ACG   ++ LS  +
Sbjct: 97  LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
            + +   G  +YGQLG G D              + Q  P+ I +L G   ++VA G  H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL-------PPEAVISAG 293
           +  +   G ++ WG   +G+LG  ++ D +VP  +   +   ++          A+   G
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEG 261

Query: 294 SVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSC 351
            V +    G GQL       N+    + P+ + +L G  +  +  G  H   FV +    
Sbjct: 262 GVFTFGAGGYGQLG-----HNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRI 316

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKK 377
            S+G    G+LG G    + S    K
Sbjct: 317 YSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 298 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 76/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR     A + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          SWG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------SWGLDSDGQLGLLG-SEEY 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLD 51


>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
 gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
          Length = 435

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 126/274 (45%), Gaps = 29/274 (10%)

Query: 49  RLRPLVGVDIRFV-AAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           + +P V   I+ V  A     H +A+   G  YTWG    G LGHG   +   P ++   
Sbjct: 125 QYKPYVNPRIKRVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYERELLPRLLEGP 184

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK-HGQLGSGS--IRNE---IEPSPVRCLVS 161
            K +I    AG SH+  VTE G    +G ++  G+LG G+  I +E     P+ V+ L  
Sbjct: 185 WKDRIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV 244

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD-NEYNTKDSSVKLAYEAQPRP 220
            + +  CG  FT+ L+  +   + + G     +LGHGT  N +               +P
Sbjct: 245 PIASVYCGGFFTMALT--KSGQLWSWGGNANHELGHGTRANNW---------------KP 287

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           + +AAL   T+V+VACG  H  A+   G V TWG+GG G+LGH   ++   P  V+    
Sbjct: 288 KVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMAD 347

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
                    I+ G   ++     G LY WGK ++
Sbjct: 348 KTC----TYIACGPAWTAAITENGDLYTWGKNRD 377



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 147/359 (40%), Gaps = 52/359 (14%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL----------------SKYKIKKAGA-- 117
           E   + WGR   GQ+GHG +     P ++S L                +K ++   G   
Sbjct: 34  ELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAKPRLGNVGVTC 93

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G  H+V+  E  +   +G    G+LG  +  N+ +P  V   +  V   + G    + L+
Sbjct: 94  GLFHSVLFAEQ-DVFVWGKGDGGRLGIDTEFNQYKPY-VNPRIKRVQMASAGGLHNIALT 151

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
            V   ++   G   +G LGHG+              YE +  PR +     + IV V+ G
Sbjct: 152 EV--GNVYTWGYGAFGALGHGS--------------YERELLPRLLEGPWKDRIVHVSAG 195

Query: 238 TNHTVAVDSKGYVYTWGFG-GYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
            +H+ AV   G +YTWG   G GRLGH   +  DE    R    Q  +V  P A +  G 
Sbjct: 196 GSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV--PIASVYCGG 253

Query: 295 VNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVG 346
             +      GQL+ WG   N+        ++W  PK +  L    L  +  G  H   + 
Sbjct: 254 FFTMALTKSGQLWSWGGNANHELGHGTRANNWK-PKVVAALEDVTLVQVACGGFHAAALT 312

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            D   I+WG+   G+LG+G    ++   P  V+ +       +ACG   +  I +  ++
Sbjct: 313 QDGKVITWGYGGNGQLGHGTL--ENGKEPAIVEAMADKTCTYIACGPAWTAAITENGDL 369



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 97/208 (46%), Gaps = 13/208 (6%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +G L  PT+++ L   D+   +  C     +A+   G+ ++WG N   +LGHG +    +
Sbjct: 230 EGALSRPTKVQAL---DVPIASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWK 286

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P +V+ L    + +   G  H   +T+DG  + +G+  +GQLG G++ N  EP+ V  + 
Sbjct: 287 PKVVAALEDVTLVQVACGGFHAAALTQDGKVITWGYGGNGQLGHGTLENGKEPAIVEAMA 346

Query: 161 SEV-TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +  T  ACG  +T  ++  E   +   G  +  QLG     +       V+        
Sbjct: 347 DKTCTYIACGPAWTAAIT--ENGDLYTWGKNRDYQLGIPGLKDEQLDPVLVQF------- 397

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSK 247
           P+A+       ++ V+CG NH V + S+
Sbjct: 398 PQALHEKTPVEVLGVSCGANHGVCIVSR 425



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 93/218 (42%), Gaps = 24/218 (11%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNE-RGQLGHGDKIQRD-----RPTIVSELSKYKI 112
           R V       H  AV   G  YTWGR+E  G+LGHG+    D     RPT V  L    I
Sbjct: 188 RIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALD-VPI 246

Query: 113 KKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGAD 171
                G   T+ +T+ G   ++G N + +LG G+  N  +P  V  L    +   ACG  
Sbjct: 247 ASVYCGGFFTMALTKSGQLWSWGGNANHELGHGTRANNWKPKVVAALEDVTLVQVACGGF 306

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
               L+  +   ++  G    GQLGHGT               E    P  + A+A +T 
Sbjct: 307 HAAALT--QDGKVITWGYGGNGQLGHGT--------------LENGKEPAIVEAMADKTC 350

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
             +ACG   T A+   G +YTWG     +LG    KDE
Sbjct: 351 TYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLKDE 388


>gi|301115610|ref|XP_002905534.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
 gi|262110323|gb|EEY68375.1| regulator of chromosome condensation (RCC1)-like protein
           [Phytophthora infestans T30-4]
          Length = 456

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 156/367 (42%), Gaps = 45/367 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           ++P     L G  I  V  G  + H  A+D EG+ Y WG NE  +LG G+  + +  P  
Sbjct: 99  LTPKLTEALEGKAITHVEFG--ASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPRE 156

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW-----NKHGQLGSGSIRNEIEPSPVRC 158
           V  L   KI     G   T  V EDG   ++GW        G LG    ++E  P  +  
Sbjct: 157 VEALKGIKIVDVSCGDYFTAAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTT 216

Query: 159 LVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           LV +   +    CG   TV L+  +   I   G  +YG+LG+G  +              
Sbjct: 217 LVDQGVPIATVECGEFHTVALT--KDGEIWAWGNGEYGRLGNGESDTCEV---------- 264

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG------FGGYGRLGHREQKDE 269
               P  I   + + +V +A G + + A+  KG +Y+WG       G  G L       E
Sbjct: 265 ----PEPIEFFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYNIE 320

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLS 329
            +P  V+ F  N +L  +  I+AG  +++     G+LYMWG        W+ P  +  ++
Sbjct: 321 SIPVLVEAF--NGLLVKQ--IAAGYDHAAAVTEDGRLYMWG-----AKIWIEPHEMTAVN 371

Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
              +  +  G  +   +  D    ++G      LG+G   +K+   P K+  L G+++ S
Sbjct: 372 EHKMTQVACGRQYTVGLTDDGKVFTFGKGSSNCLGHGD--RKNQLQPVKIQALAGVNITS 429

Query: 389 VACGYGH 395
           V+CG  H
Sbjct: 430 VSCGDYH 436



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 105/253 (41%), Gaps = 27/253 (10%)

Query: 75  VEGRCYTWGRNERGQLGHGDKI--------QRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
            +   YTWG    GQLGHG  I        +   P +   L    I     G SH+  + 
Sbjct: 67  TQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVEFGASHSAAID 126

Query: 127 EDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASI 184
           E+G    +G N++ +LG G S   E  P  V  L   ++   +CG  FT  +        
Sbjct: 127 EEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKGIKIVDVSCGDYFTAAVDE------ 180

Query: 185 LNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTNHTV 242
            +  +  +G  G           +  K     +P PR +  L   G  I  V CG  HTV
Sbjct: 181 -DGKMYSWGWGGSTMKGAGGLGHAGGK----DEPTPRLLTTLVDQGVPIATVECGEFHTV 235

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A+   G ++ WG G YGRLG+ E     VP  ++ F ++NV+     I+AG   S     
Sbjct: 236 ALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIEFFSKDNVVS----IAAGRDFSFALTD 291

Query: 303 GGQLYMWGKLKNN 315
            G+LY WG    N
Sbjct: 292 KGELYSWGGNSQN 304



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 94/232 (40%), Gaps = 34/232 (14%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P  L  LV   +      C   H VA+  +G  + WG  E G+LG+G+    + P  + 
Sbjct: 210 TPRLLTTLVDQGVPIATVECGEFHTVALTKDGEIWAWGNGEYGRLGNGESDTCEVPEPIE 269

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSPVRC-- 158
             SK  +    AGR  +  +T+ G   ++G N   QLG G      + N IE  PV    
Sbjct: 270 FFSKDNVVSIAAGRDFSFALTDKGELYSWGGNSQNQLGIGGGLAMDVYN-IESIPVLVEA 328

Query: 159 ----LVSEVTA-----TACGAD-------FTVWLSSVEGASILNAGLPQYG-----QLGH 197
               LV ++ A      A   D         +W+   E  ++    + Q        +G 
Sbjct: 329 FNGLLVKQIAAGYDHAAAVTEDGRLYMWGAKIWIEPHEMTAVNEHKMTQVACGRQYTVGL 388

Query: 198 GTDNEYNT--KDSSVKLAY---EAQPRPRAIAALAGETIVKVACGTNHTVAV 244
             D +  T  K SS  L +   + Q +P  I ALAG  I  V+CG  H  A+
Sbjct: 389 TDDGKVFTFGKGSSNCLGHGDRKNQLQPVKIQALAGVNITSVSCGDYHMGAI 440



 Score = 38.5 bits (88), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 76/183 (41%), Gaps = 29/183 (15%)

Query: 241 TVAVDSKGYVYTWGFGGYGRLGH--------REQKDEWVPRRVDVFQRNNVLPPEAVISA 292
           T +  ++  VYTWG G  G+LGH        R   +E  P+  +  +   +   E     
Sbjct: 62  TASYATQSSVYTWGNGTLGQLGHGSVIKSGIRSAYEELTPKLTEALEGKAITHVE----F 117

Query: 293 GSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
           G+ +S+     G+LY+WG        L  + +    P+ +  L G  ++ +D     +F 
Sbjct: 118 GASHSAAIDEEGKLYVWGSNEYSKLGLGESSEMETLPREVEALKG--IKIVDVSCGDYFT 175

Query: 346 GA---DSSCISW---GHAQYGELGYGPYGQKSSAMPKKVDIL--EGMHVISVACGYGHSL 397
            A   D    SW   G    G  G G  G K    P+ +  L  +G+ + +V CG  H++
Sbjct: 176 AAVDEDGKMYSWGWGGSTMKGAGGLGHAGGKDEPTPRLLTTLVDQGVPIATVECGEFHTV 235

Query: 398 VIV 400
            + 
Sbjct: 236 ALT 238


>gi|417401058|gb|JAA47434.1| Putative alpha-tubulin suppressor [Desmodus rotundus]
          Length = 445

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 99/353 (28%), Positives = 149/353 (42%), Gaps = 53/353 (15%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           + WG N  GQLG G K     P  +++  K   I++   G  H+ VVT+ G+    G NK
Sbjct: 18  FAWGANSYGQLGLGHKEDVLSPQQLNDFCKPMCIRRITGGGGHSAVVTDGGSLFVCGLNK 77

Query: 139 HGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
            G+LG G   + +  +P R L+   V   ACG DFTV L+  E   +L+ G   +GQLG 
Sbjct: 78  DGRLGLGHTEDVLCFTPCRSLLGCPVQQVACGWDFTVILT--ESGQVLSCGSNSFGQLG- 134

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                +  + S V  A E          L  E +V +A G  H +A  + G V+ WG  G
Sbjct: 135 ---VPHGPRRSVVPQAIE----------LLREKVVGIAAGLRHALAATASGIVFQWGT-G 180

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPE----AVISAGSVNSSCTAGGGQLYMWGKLK 313
               G R    + +P  +   + + V   E      + AGS +S+     G+LY+WG  K
Sbjct: 181 LASSGRRLCPGQTLPLFLTAKEPSRVTGLENSRAICVVAGSEHSASLTDAGELYVWGSNK 240

Query: 314 NN---GDDWMYPKPLMDLSGWNLRCMD--------SGNMHHFVGADS-SCISWGHAQYGE 361
           +          P P     G    C          SG  H     ++    +WG A YG+
Sbjct: 241 HGQLASQAAFLPVP----QGIEAHCFQNEKVTAVWSGWTHLVAQTETGKVFTWGRADYGQ 296

Query: 362 LGYGPYG-------QKSSAMP---KKVDILEGMHVIS----VACGYGHSLVIV 400
           LG  P         ++ S  P    + +    +H ++    V+CG  H+L +V
Sbjct: 297 LGRKPESPEGWNPEKQGSPFPCSRPQKNTPSSLHCLTGATEVSCGSEHNLAVV 349



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/389 (22%), Positives = 150/389 (38%), Gaps = 52/389 (13%)

Query: 43  NLVSPTRL----RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           +++SP +L    +P+    IR +  G    H   V   G  +  G N+ G+LG G     
Sbjct: 35  DVLSPQQLNDFCKPMC---IRRITGG--GGHSAVVTDGGSLFVCGLNKDGRLGLGHTEDV 89

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPVR 157
              T    L    +++   G   TV++TE G  L+ G N  GQLG     R  + P  + 
Sbjct: 90  LCFTPCRSLLGCPVQQVACGWDFTVILTESGQVLSCGSNSFGQLGVPHGPRRSVVPQAIE 149

Query: 158 CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQ 217
            L  +V   A G    +       A+  +  + Q+G  G  +         ++ L   A+
Sbjct: 150 LLREKVVGIAAGLRHAL-------AATASGIVFQWGT-GLASSGRRLCPGQTLPLFLTAK 201

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
             P  +  L     + V  G+ H+ ++   G +Y WG   +G+L  +      VP+ ++ 
Sbjct: 202 -EPSRVTGLENSRAICVVAGSEHSASLTDAGELYVWGSNKHGQLASQAAFLP-VPQGIEA 259

Query: 278 --FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL-----------------KNNGDD 318
             FQ   V      + +G  +       G+++ WG+                  +  G  
Sbjct: 260 HCFQNEKV----TAVWSGWTHLVAQTETGKVFTWGRADYGQLGRKPESPEGWNPEKQGSP 315

Query: 319 WMYPKPLMDLSGWNLRCM------DSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSS 372
           +   +P  +    +L C+        G+ H+      +C SWG  ++G  G G   + + 
Sbjct: 316 FPCSRPQKNTPS-SLHCLTGATEVSCGSEHNLAVVGGACCSWGWNEHGMCGDG--SEANI 372

Query: 373 AMPKKVDILEGMHVISVACGYGHSLVIVD 401
             PK V  L    V+ V CG GHSL    
Sbjct: 373 WAPKLVQALRSSSVLLVGCGAGHSLAFCQ 401



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 119/282 (42%), Gaps = 27/282 (9%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           + G++L CGS  +  +G   G      V P  +  L+   +  +AAG    H +A    G
Sbjct: 118 ESGQVLSCGSNSFGQLGVPHGPRRS--VVPQAIE-LLREKVVGIAAGLR--HALAATASG 172

Query: 78  RCYTWGR---NERGQLGHGDKI----QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGN 130
             + WG    +   +L  G  +        P+ V+ L   +     AG  H+  +T+ G 
Sbjct: 173 IVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSRVTGLENSRAICVVAGSEHSASLTDAGE 232

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSP----VRCLVSEVTATACGADFTVWLSSVEGASILN 186
              +G NKHGQL S   +    P P      C  +E   TA  + +T  ++  E   +  
Sbjct: 233 LYVWGSNKHGQLAS---QAAFLPVPQGIEAHCFQNE-KVTAVWSGWTHLVAQTETGKVFT 288

Query: 187 AGLPQYGQLGHGTDNEY----NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            G   YGQLG   ++        + S    +   +  P ++  L G T  +V+CG+ H +
Sbjct: 289 WGRADYGQLGRKPESPEGWNPEKQGSPFPCSRPQKNTPSSLHCLTGAT--EVSCGSEHNL 346

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           AV   G   +WG+  +G  G   + + W P+ V   + ++VL
Sbjct: 347 AVVG-GACCSWGWNEHGMCGDGSEANIWAPKLVQALRSSSVL 387



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 77/163 (47%), Gaps = 12/163 (7%)

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
           A  +   ++ WG   YG+LG   ++D   P++++ F +   +     I+ G  +S+    
Sbjct: 10  ATPAPTALFAWGANSYGQLGLGHKEDVLSPQQLNDFCKPMCI---RRITGGGGHSAVVTD 66

Query: 303 GGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSG-NMHHFVGADSSCISWG 355
           GG L++ G  K+      + +D +   P   L G  ++ +  G +    +      +S G
Sbjct: 67  GGSLFVCGLNKDGRLGLGHTEDVLCFTPCRSLLGCPVQQVACGWDFTVILTESGQVLSCG 126

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
              +G+LG  P+G + S +P+ +++L    V+ +A G  H+L 
Sbjct: 127 SNSFGQLGV-PHGPRRSVVPQAIELLR-EKVVGIAAGLRHALA 167


>gi|383319169|ref|YP_005380010.1| chromosome condensation regulator RCC1 [Methanocella conradii
           HZ254]
 gi|379320539|gb|AFC99491.1| regulator of chromosome condensation RCC1 [Methanocella conradii
           HZ254]
          Length = 438

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 144/315 (45%), Gaps = 37/315 (11%)

Query: 72  AVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNS 131
           A+  +G  +TWG NE GQLG G  +  + P +V  L    ++    G SH + +  DG  
Sbjct: 104 ALKDDGTVWTWGWNEYGQLGDGTTMDHNTPGMVGGLG--NVRAVAVGISHMLALGNDGTV 161

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            A+G N  GQLG G+  + + P  V  L   + A + G +    L+  +  ++   GL  
Sbjct: 162 WAWGKNNCGQLGDGTNVDSMTPVRVSGL-PRIVAISAGYNHN--LAIDDAGNVWTWGLND 218

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            GQLG GT+               + P P+ +  LA   +  VA G++ ++A+   G ++
Sbjct: 219 CGQLGDGTN--------------ISSPNPKKVKGLA--NVTAVAGGSSFSLALKDDGTIW 262

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
            WG    G LG    KD   P  V V    NV+     I+AG   S+     G L++W  
Sbjct: 263 AWGSNVQGELGVGTTKD--CPLPVKVQGLTNVIR----IAAGGETSAAITNDGSLWVWGH 316

Query: 310 ---GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
              GK  + G+D   P+    LS  N++ +D G ++   +  D S    G  Q+G+LG G
Sbjct: 317 NEQGKYISGGEDASSPRRASGLS--NVKLVDIGTINIIALENDGSLWVVGDNQFGQLGTG 374

Query: 366 PYGQKSSAMPKKVDI 380
               ++  MP +V I
Sbjct: 375 NTYDRN--MPARVAI 387



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 38/225 (16%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           ++R VA G    H +A+  +G  + WG+N  GQLG G  +    P  VS L   +I    
Sbjct: 141 NVRAVAVGI--SHMLALGNDGTVWAWGKNNCGQLGDGTNVDSMTPVRVSGLP--RIVAIS 196

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
           AG +H + + + GN   +G N  GQLG G+  +   P  V+ L + VTA A G+ F++ L
Sbjct: 197 AGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKVKGL-ANVTAVAGGSSFSLAL 255

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
              +  +I   G    G+LG GT     TKD          P P  +  L    ++++A 
Sbjct: 256 K--DDGTIWAWGSNVQGELGVGT-----TKDC---------PLPVKVQGLT--NVIRIAA 297

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQ-------KDEWVPRR 274
           G   + A+ + G ++ W        GH EQ       +D   PRR
Sbjct: 298 GGETSAAITNDGSLWVW--------GHNEQGKYISGGEDASSPRR 334



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 106/243 (43%), Gaps = 31/243 (12%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           ++P R+  L     R VA      H +A+D  G  +TWG N+ GQLG G  I    P  V
Sbjct: 181 MTPVRVSGLP----RIVAISAGYNHNLAIDDAGNVWTWGLNDCGQLGDGTNISSPNPKKV 236

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L+   +     G S ++ + +DG   A+G N  G+LG G+ ++   P  V+ L + + 
Sbjct: 237 KGLA--NVTAVAGGSSFSLALKDDGTIWAWGSNVQGELGVGTTKDCPLPVKVQGLTNVIR 294

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             A G            A+I N G       GH    +Y +         E    PR  +
Sbjct: 295 IAAGGE---------TSAAITNDG--SLWVWGHNEQGKYISGG-------EDASSPRRAS 336

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-----FQ 279
            L+   +V +  GT + +A+++ G ++  G   +G+LG     D  +P RV +     F 
Sbjct: 337 GLSNVKLVDI--GTINIIALENDGSLWVVGDNQFGQLGTGNTYDRNMPARVAIGSNVGFA 394

Query: 280 RNN 282
           +NN
Sbjct: 395 QNN 397



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 89/182 (48%), Gaps = 8/182 (4%)

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           A +  ++V VA G   +VA+   G V+TWG   +G LG+   +D++VP+RV ++   +V 
Sbjct: 37  AASQPSVVDVAEGHGLSVALLDNGTVWTWGHSWHGGLGYESVQDQYVPKRVPIYNVTSVD 96

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF 344
              A ++A   + +    G   Y  G+L  +G    +  P M     N+R +  G  H  
Sbjct: 97  SCFASVAALKDDGTVWTWGWNEY--GQL-GDGTTMDHNTPGMVGGLGNVRAVAVGISHML 153

Query: 345 -VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRT 403
            +G D +  +WG    G+LG G      S  P +V  L    +++++ GY H+L I D  
Sbjct: 154 ALGNDGTVWAWGKNNCGQLGDGT--NVDSMTPVRVSGLP--RIVAISAGYNHNLAIDDAG 209

Query: 404 NV 405
           NV
Sbjct: 210 NV 211


>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
 gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
          Length = 1423

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 155/366 (42%), Gaps = 42/366 (11%)

Query: 68  CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
            H + +  +   + WG N  GQLG G    R  PT    L    + +  AG SH++ +T+
Sbjct: 80  SHSLVLTSDQTVWAWGDNTNGQLGDGTTTGRQTPTPAQGLPS--VAQVSAGESHSLALTD 137

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT--ATACGADFTVWLSSVEGASIL 185
           DG   A+G N  GQLG G+  +   P  V+ L ++ T    A G + ++ L+S     + 
Sbjct: 138 DGRVFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIKVVAAGGNHSLALTS--DGRVF 195

Query: 186 NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
             G    GQLG+ +     T DSS+ +  +  P            +  VA G NH++A+ 
Sbjct: 196 AWGKNSSGQLGNNS-----TVDSSIPVQVQGLP----------ANVTAVAAGGNHSLALT 240

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
           S G +Y WG    G+LG     +   P  V      +   P AV SAG  +S      G 
Sbjct: 241 SDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGS--KPVAV-SAGKDHSLALMQDGT 297

Query: 306 LYMWGKLK----NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYG 360
           +Y WG        NG       P+      N+  + +G      + +D    +WG    G
Sbjct: 298 VYAWGGNSYGQLGNGTTTASEMPVQVTGLANVTAVSAGGSDSLALTSDGYVYAWGLNSSG 357

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVIS-----------VACGYGHSLVIVDRT-NVGER 408
           +LG G    +++ + +   +L    +++           +A   G +  ++D T  VG  
Sbjct: 358 QLGDGTTSNRNTPV-RVFSVLSTGALLTDLQLSDGSSNPIALSPGFTSTVMDYTATVGAG 416

Query: 409 LDQVIL 414
           ++QV+L
Sbjct: 417 VNQVLL 422



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/241 (31%), Positives = 110/241 (45%), Gaps = 23/241 (9%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           I+ VAAG    H +A+  +GR + WG+N  GQLG+   +    P  V  L    +    A
Sbjct: 175 IKVVAAG--GNHSLALTSDGRVFAWGKNSSGQLGNNSTVDSSIPVQVQGL-PANVTAVAA 231

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV--SEVTATACGADFTVW 175
           G +H++ +T DG   A+G N  GQLG G+  N   P  V  L   S+  A + G D ++ 
Sbjct: 232 GGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLA 291

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L  ++  ++   G   YGQLG+GT                A   P  +  LA   +  V+
Sbjct: 292 L--MQDGTVYAWGGNSYGQLGNGT--------------TTASEMPVQVTGLAN--VTAVS 333

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
            G + ++A+ S GYVY WG    G+LG     +   P RV        L  +  +S GS 
Sbjct: 334 AGGSDSLALTSDGYVYAWGLNSSGQLGDGTTSNRNTPVRVFSVLSTGALLTDLQLSDGSS 393

Query: 296 N 296
           N
Sbjct: 394 N 394



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 77/150 (51%), Gaps = 6/150 (4%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL-SKYKIKKA 115
           ++  VAAG    H +A+  +GR Y WG N  GQLG G       P +V+ L +  K    
Sbjct: 225 NVTAVAAG--GNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSSTPVLVAGLPAGSKPVAV 282

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVW 175
            AG+ H++ + +DG   A+G N +GQLG+G+      P  V  L + VTA + G   ++ 
Sbjct: 283 SAGKDHSLALMQDGTVYAWGGNSYGQLGNGTTTASEMPVQVTGL-ANVTAVSAGGSDSLA 341

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNT 205
           L+S     +   GL   GQLG GT +  NT
Sbjct: 342 LTS--DGYVYAWGLNSSGQLGDGTTSNRNT 369


>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
           distachyon]
          Length = 913

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 161/398 (40%), Gaps = 57/398 (14%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           DAV R    +  +++ P  L   + +D+  V  G    H   V   G  +TWG    G+L
Sbjct: 69  DAVIR--STVRHDVLLPKPLESKLVLDVYHVDCGVK--HAALVTKNGEVFTWGEESGGRL 124

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIR 148
           GHG +     P++V  L+   +     G  HT  VT  G    +G   H  G LG G+  
Sbjct: 125 GHGSREDYIHPSLVESLAVSNVDFVACGEFHTCAVTTAGELYTWGDGTHNIGLLGHGTDL 184

Query: 149 NEIEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   P  +   +   +V   +CG   T  ++S     +   G   +G LGHG        
Sbjct: 185 SHWIPKRISGALEGQQVAYVSCGTWHTALITST--GQLFTFGDGTFGVLGHGN------- 235

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGF 255
                   E+ P PR + +L+G   + VACG  HT AV            S G ++TWG 
Sbjct: 236 -------RESIPCPREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGD 288

Query: 256 GGYGRLGHREQKDEWVPRRVDV-----FQRNNVLPPEAVISAGSVNSSCTAGGGQLY--- 307
           G   RLGH +++    P  V       F R         I+ G   +      GQ++   
Sbjct: 289 GDKHRLGHGDKEPRVKPTCVASLIDYDFHR---------IACGHSLTVGLTTSGQVWGMG 339

Query: 308 --MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGY 364
             ++G+L N   D   P  + D+ G N+  +  G+ H   +   S   +WG    G LG+
Sbjct: 340 NTVYGQLGNPRSDGKLPCLVEDIMGENVVQVACGSYHVAVLTVKSEVFTWGKGANGRLGH 399

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           G    +   +P  V++L    V  +ACG   +  I  R
Sbjct: 400 GDIEDRK--IPTLVEVLRDRGVRHIACGANFTAAICQR 435


>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
 gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
          Length = 1109

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 103/376 (27%), Positives = 158/376 (42%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ +A  C   H   V  +G  ++WG    G+LGHG       P ++  
Sbjct: 306 PKALESAVVLDVQNIA--CGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEA 363

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLVS--E 162
           LS   I+    G  HT  VT  G+   +G   +  G LG G+  +   P  V   +    
Sbjct: 364 LSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNGPLEGIH 423

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V++ +CG   T  +SS     +   G   +G LGHG          S+ L       PR 
Sbjct: 424 VSSISCGPWHTAVVSS--AGQLFTFGDGTFGVLGHGDRK-------SISL-------PRE 467

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH +++ + 
Sbjct: 468 VESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKL 527

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    ++ G   +      G +Y     ++G+L N   D   P  +
Sbjct: 528 VPTCVSAL----VEPNFCQVACGHSLTIARTTSGHVYTMGSPVYGQLGNPQSDGKLPARV 583

Query: 326 M-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
              LS  ++  +  G  H   + + +   +WG    G LG+G    K+  +P  V+ L+ 
Sbjct: 584 EGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHGDTDDKN--LPSLVEALKD 641

Query: 384 MHVISVACGYGHSLVI 399
             V S+ACG   +  I
Sbjct: 642 KQVKSIACGTNFTAAI 657



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 108/259 (41%), Gaps = 35/259 (13%)

Query: 42  GNLVS---PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           GN VS   P R+  PL G+ +  ++  C   H   V   G+ +T+G    G LGHGD+  
Sbjct: 404 GNEVSHWVPKRVNGPLEGIHVSSIS--CGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKS 461

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTE------------DGNSLAFGWNKHGQLGSG 145
              P  V  L   +  +A  G  HT  V E             G    +G    G+LG G
Sbjct: 462 ISLPREVESLKGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHG 521

Query: 146 SIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
               ++ P+ V  LV       ACG   T+  +      +   G P YGQLG+       
Sbjct: 522 DKEAKLVPTCVSALVEPNFCQVACGHSLTI--ARTTSGHVYTMGSPVYGQLGN------- 572

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR 264
              S  KL        R    L+  ++ ++ACG  H   + SK  VYTWG G  GRLGH 
Sbjct: 573 -PQSDGKLP------ARVEGKLSRSSVEEIACGAYHVAVLTSKTEVYTWGKGANGRLGHG 625

Query: 265 EQKDEWVPRRVDVFQRNNV 283
           +  D+ +P  V+  +   V
Sbjct: 626 DTDDKNLPSLVEALKDKQV 644



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 103/249 (41%), Gaps = 76/249 (30%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG      ++  +   I + G    G+LGHG D++                
Sbjct: 313 VVLDVQNIACGGQHAALVT--KQGEIFSWGEESGGRLGHGVDSDV--------------L 356

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY--GRLGHREQKDEWVPRRVD 276
            P+ I AL+   I  VACG  HT AV   G +YTWG G Y  G LGH  +   WVP+RV+
Sbjct: 357 HPQLIEALSNTNIEFVACGEYHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVN 416

Query: 277 VFQRNNVLPPEAV----ISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWN 332
                   P E +    IS G  +++  +  GQL+                         
Sbjct: 417 G-------PLEGIHVSSISCGPWHTAVVSSAGQLF------------------------- 444

Query: 333 LRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
                               ++G   +G LG+G   +KS ++P++V+ L+G+  +  ACG
Sbjct: 445 --------------------TFGDGTFGVLGHG--DRKSISLPREVESLKGLRTVQAACG 482

Query: 393 YGHSLVIVD 401
             H+  +V+
Sbjct: 483 VWHTAAVVE 491



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 126/311 (40%), Gaps = 33/311 (10%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGA 170
           ++    G  H  +VT+ G   ++G    G+LG G   + + P  +  L  + +   ACG 
Sbjct: 317 VQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVLHPQLIEALSNTNIEFVACGE 376

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T  ++          G   +G LGHG +  +              P+ R    L G  
Sbjct: 377 YHTCAVTLSGDLYTWGDGTYNFGLLGHGNEVSHWV------------PK-RVNGPLEGIH 423

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ-RNNVLPPEAV 289
           +  ++CG  HT  V S G ++T+G G +G LGH ++K   +PR V+  +    V     V
Sbjct: 424 VSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRTVQAACGV 483

Query: 290 ISAGSV-------NSSCTAGGGQLYMWGKLKN----NGDDW--MYPKPLMDLSGWNLRCM 336
               +V       +SS     G+L+ WG        +GD    + P  +  L   N   +
Sbjct: 484 WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVSALVEPNFCQV 543

Query: 337 DSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYG 394
             G+        S  + + G   YG+LG  P  Q    +P +V+  L    V  +ACG  
Sbjct: 544 ACGHSLTIARTTSGHVYTMGSPVYGQLG-NP--QSDGKLPARVEGKLSRSSVEEIACGAY 600

Query: 395 HSLVIVDRTNV 405
           H  V+  +T V
Sbjct: 601 HVAVLTSKTEV 611


>gi|334186523|ref|NP_001154232.2| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
 gi|332658030|gb|AEE83430.1| regulator of chromosome condensation repeat-containing protein
           [Arabidopsis thaliana]
          Length = 1106

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 101/373 (27%), Positives = 156/373 (41%), Gaps = 49/373 (13%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+  +A G    H   V  +G  +TW     G+LGHG ++   RP 
Sbjct: 257 DVLIPKPLESNVVLDVHQIACGVR--HIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPK 314

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  L+   I     G  HT  V+  G+   +G   H  G LG GS  +   P  V   V
Sbjct: 315 LVEFLALTNIDFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPV 374

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG     W S++  A+  +   G   +G LGHG                E+
Sbjct: 375 EGLQVLSVACG----TWHSALATANGKLFTFGDGAFGVLGHGD--------------RES 416

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQ 266
              P+ +  L+G   +KVACG  HTVA+           S   ++TWG G   RLGH  +
Sbjct: 417 VSYPKEVKMLSGLKTLKVACGVWHTVAIVEVMNQTGTSTSSRKLFTWGDGDKNRLGHGNK 476

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
           +   +P  V      N       I+ G   +      G ++       G+L ++  D   
Sbjct: 477 ETYLLPTCVSSLIDYNF----NQIACGHTFTVALTTSGHVFTMGGTSHGQLGSSNSDGKL 532

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D L G  +  +  G+ H   + + S   +WG    G LG+G    + +  P  V+
Sbjct: 533 PCLVQDRLVGEFVEEISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKT--PTLVE 590

Query: 380 ILEGMHVISVACG 392
            L   HV S++CG
Sbjct: 591 ALRERHVKSISCG 603



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 90/195 (46%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACG  H   V  +G V+TW     GRLGH  Q D   P+ V+   
Sbjct: 261 PKPLESNVVLDVHQIACGVRHIALVTRQGEVFTWEEEAGGRLGHGIQVDVCRPKLVEFLA 320

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N+      ++ G  ++   +  G L+ WG       L  +G D   W+  +    + G
Sbjct: 321 LTNI----DFVACGEYHTCAVSTSGDLFTWGDGIHNVGLLGHGSDLSHWIPKRVSGPVEG 376

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H     A+    ++G   +G LG+G   ++S + PK+V +L G+  + V
Sbjct: 377 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--DRESVSYPKEVKMLSGLKTLKV 434

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  H++ IV+  N
Sbjct: 435 ACGVWHTVAIVEVMN 449



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 76/173 (43%), Gaps = 27/173 (15%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           + +TWG  ++ +LGHG+K     PT VS L  Y   +   G + TV +T  G+    G  
Sbjct: 459 KLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFNQIACGHTFTVALTTSGHVFTMGGT 518

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE------VTATACGADFTVWLSSVEGASILNAGLPQ 191
            HGQLGS +   ++      CLV +      V   +CG      L+S   + +   G   
Sbjct: 519 SHGQLGSSNSDGKLP-----CLVQDRLVGEFVEEISCGDHHVAVLTS--RSEVFTWGKGS 571

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
            G+LGHG  ++  T              P  + AL    +  ++CG+N T ++
Sbjct: 572 NGRLGHGDKDDRKT--------------PTLVEALRERHVKSISCGSNFTSSI 610



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 3/60 (5%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +SC   H   +      +TWG+   G+LGHGDK  R  PT+V  L +  +K    G + T
Sbjct: 548 ISCGDHHVAVLTSRSEVFTWGKGSNGRLGHGDKDDRKTPTLVEALRERHVKSISCGSNFT 607


>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
          Length = 985

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/232 (31%), Positives = 113/232 (48%), Gaps = 20/232 (8%)

Query: 48  TRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
           T  RPL G+D  + +   C   H VA+  +G+ + WG N  GQLG   ++     P  + 
Sbjct: 107 TVCRPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHLQ 166

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            L    + +  AG +H+ V++  G    +G N  GQLG G   +   P+ V+ L  + T 
Sbjct: 167 SLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTV 226

Query: 166 T-ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + +CG + T  LS  +G ++   G   +GQLGH +      KD         +  PR +A
Sbjct: 227 SISCGGEHTATLS--KGGTVFTFGSGGFGQLGHNS-----LKD---------EHHPRLVA 270

Query: 225 ALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            L G  + +V CG +HT V V     +Y++G G  G+LG+ EQ  + VP  V
Sbjct: 271 ELWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV 322



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/180 (33%), Positives = 84/180 (46%), Gaps = 6/180 (3%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G+L   G      +G RK      + SP  L+ L G+ +  ++AG    H   + + G  
Sbjct: 137 GQLFVWGENAHGQLGLRKE--QALIQSPQHLQSLCGIPVAQISAG--GNHSFVLSLSGVV 192

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG N  GQLG GD   R  PTIV  LS  K      G  HT  +++ G    FG    
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGF 252

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG  S+++E  P  V  L  S+V+   CG   T+ L ++    I + G    GQLG+G
Sbjct: 253 GQLGHNSLKDEHHPRLVAELWGSKVSQVTCGRHHTLVLVALTN-RIYSFGCGMQGQLGNG 311



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 89/187 (47%), Gaps = 26/187 (13%)

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE- 152
           DK    RP  +  L   K+ +   G  H+V ++ DG    +G N HGQLG    +  I+ 
Sbjct: 104 DKYTVCRP--LKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS 161

Query: 153 PSPVRCL----VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
           P  ++ L    V++++A      F + LS V    +   G    GQLG G     +T D 
Sbjct: 162 PQHLQSLCGIPVAQISAGG-NHSFVLSLSGV----VFGWGSNSAGQLGLG-----DTTDR 211

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            V         P  + +L+G+  V ++CG  HT  +   G V+T+G GG+G+LGH   KD
Sbjct: 212 FV---------PTIVKSLSGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKD 262

Query: 269 EWVPRRV 275
           E  PR V
Sbjct: 263 EHHPRLV 269



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 14/192 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVDVFQ 279
           R +  L    ++++ACG  H+VA+ + G ++ WG   +G+LG R EQ     P+ +    
Sbjct: 110 RPLKGLDNTKVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQSPQHL---- 165

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
           ++    P A ISAG  +S   +  G ++ WG          +  D   P  +  LSG   
Sbjct: 166 QSLCGIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKKT 225

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +    +  ++G   +G+LG+     K    P+ V  L G  V  V CG
Sbjct: 226 VSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSL--KDEHHPRLVAELWGSKVSQVTCG 283

Query: 393 YGHSLVIVDRTN 404
             H+LV+V  TN
Sbjct: 284 RHHTLVLVALTN 295



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 9/129 (6%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           PT ++ L G   + V+  C   H   +   G  +T+G    GQLGH        P +V+E
Sbjct: 214 PTIVKSLSGK--KTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLVAE 271

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
           L   K+ +   GR HT+V+    N + +FG    GQLG+G    +  P PV      +  
Sbjct: 272 LWGSKVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLPV------LLP 325

Query: 166 TACGADFTV 174
           T C  +FT+
Sbjct: 326 TDCNCEFTM 334


>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
 gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
 gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
 gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
          Length = 1049

 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V  VACG  H+   V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    A G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51


>gi|408500623|ref|YP_006864542.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
 gi|408465447|gb|AFU70976.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
          Length = 1271

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 146/345 (42%), Gaps = 34/345 (9%)

Query: 39  ALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           AL G  V+   L P     I+F      + H +A+  +G  Y WG N  GQ+G      R
Sbjct: 188 ALGGTTVT---LTPPATRGIKFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNSTTLR 244

Query: 99  DRPTIVSELS----KYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
             P   ++ +    ++      AG   ++ +  DGN  A+G N  GQLG G+  N++ P 
Sbjct: 245 QTPVKTNKPANASDQFTFTTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTENKLTPV 304

Query: 155 PV---RCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            V     + +E T T   A +   L+     ++   G   YGQLG    N      S   
Sbjct: 305 KVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLG----NTSVPTGSDNP 360

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
            AY +  +P  ++  AG T  +++ G  H++A+ S   +Y WG    GRLG       + 
Sbjct: 361 AAYSS--KPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFT 418

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKN--NGDDWMYPKP 324
           P  V V Q   V    +  SAG  +    +  G LY W     G+L +  N +D   P  
Sbjct: 419 P--VPVRQPAGVT--FSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTL 474

Query: 325 LMDLSG------WNLRCMDSGNMHHFVGADSSCISWGHAQYGELG 363
           +    G      W  R M   +    +G+D +  SWG  +YG+LG
Sbjct: 475 ISPPDGASAGFTW-ARVMVRDDHVLAIGSDGNLYSWGLNEYGQLG 518



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 146/382 (38%), Gaps = 43/382 (11%)

Query: 50   LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
            L P     IRF        H +A+  +G  Y+WG N+ GQLG G    R  P  + + + 
Sbjct: 753  LVPPAARGIRFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTG 812

Query: 110  Y-KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI----RNEIEPSPVRC------ 158
              +  +  AG   ++ +   G+  A+G N  GQLGS +I     +    SP+R       
Sbjct: 813  VNRFTQVSAGTGFSLALDGQGHVWAWGLNSSGQLGSNAIATNGSSAYSSSPIRVQAPSGM 872

Query: 159  LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              +  T T   A  T  L+          G  ++G+LG           +S         
Sbjct: 873  TATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLG---------VPASTVATTGITT 923

Query: 219  RPRAIAALAGETI----VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
            RP  +A   GET      +V+ G +H++A D++G  + WG    G LG+           
Sbjct: 924  RPVQVATPQGETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTT 983

Query: 275  VDVFQRNNVLPP----EAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDWMYPKPLM 326
              V  +    P      A I AGS +S      G+++ WG   N     GD      P M
Sbjct: 984  TPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSM 1043

Query: 327  DLSGWNLRCMD-------SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
                 N+           SGN    +  + +   WG    G LG G  G  S   P K+ 
Sbjct: 1044 VAMPANVSTFTQLTGSRVSGNSLA-LDQNGNIWGWGQNSSGMLGTG--GTGSLNRPTKMS 1100

Query: 380  ILEGM-HVISVACGYGHSLVIV 400
               G+ H + V  G GH+L + 
Sbjct: 1101 NPSGIDHFVKVCAGTGHTLAVA 1122



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 118/289 (40%), Gaps = 27/289 (9%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVS--CHCVAVDVEGRCYTWGRNERGQLGH-------- 92
           N ++P ++    GV   F      +   H +A+      Y WG N  GQLG+        
Sbjct: 299 NKLTPVKVPKPAGVSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTSVPTGSD 358

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE 152
                  +P +VS  +     +  AGR H++ +  D    A+G N  G+LG G+      
Sbjct: 359 NPAAYSSKPVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFT 418

Query: 153 PSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
           P PVR       +     D + +  S  G  +   G   YG+LG G++ E     + +  
Sbjct: 419 PVPVRQPAGVTFSQFSAGDTSCFAISTNG-DLYAWGWNGYGRLGDGSNAEDRRTPTLIS- 476

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE--W 270
                       A AG T  +V    +H +A+ S G +Y+WG   YG+LG ++   +  +
Sbjct: 477 --------PPDGASAGFTWARVMVRDDHVLAIGSDGNLYSWGLNEYGQLGIKDINTDGSY 528

Query: 271 VPRRVDVFQRNNVLPPEAV---ISAGSVNSSCTAGGGQLYMWGKLKNNG 316
           + R   V Q  +    +     I+AG   SS     G LY WG   NNG
Sbjct: 529 ISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWG--WNNG 575



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 127/295 (43%), Gaps = 45/295 (15%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  +    GV    ++AG    H +A+  + + Y WG N  G+LG G  IQR  P  V +
Sbjct: 367 PVLVSTPAGVTFTQLSAG--RYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQ 424

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSI----RNEIEPSP------- 155
            +     +  AG +    ++ +G+  A+GWN +G+LG GS     R     SP       
Sbjct: 425 PAGVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDGSNAEDRRTPTLISPPDGASAG 484

Query: 156 ---VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
               R +V +    A G+D           ++ + GL +YGQLG         KD +   
Sbjct: 485 FTWARVMVRDDHVLAIGSD----------GNLYSWGLNEYGQLG--------IKDINTDG 526

Query: 213 AYEAQPR--PRAIAALAGE-TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           +Y ++P    ++ ++ A + T  ++  G   + A+ S G +YTWG+   G+LG     D 
Sbjct: 527 SYISRPHIVDQSTSSTAQKFTWTQINAGWRESSALGSDGNLYTWGWNNGGQLG-----DP 581

Query: 270 WVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKP 324
            VP   D  Q   + P    ++A  ++   TA      +   LK  G +W    P
Sbjct: 582 TVPIGTDNSQAMRLTP---SLAAFPLSPDVTAVKFDRTLGRDLKRAGTNWQVATP 633



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 137/324 (42%), Gaps = 40/324 (12%)

Query: 111  KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS--PVRCLVSEVTATAC 168
            +  +  AG  H++ +  DGN  ++G NK+GQLG G+  + + P   P    V+  T  + 
Sbjct: 762  RFSQVSAGDDHSLALGSDGNVYSWGANKYGQLGDGTATDRLTPVQIPKPTGVNRFTQVSA 821

Query: 169  GADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP-RPRAIAALA 227
            G  F++ L       +   GL   GQLG    N   T  SS   AY + P R +A + + 
Sbjct: 822  GTGFSLALDGQ--GHVWAWGLNSSGQLG---SNAIATNGSS---AYSSSPIRVQAPSGMT 873

Query: 228  GE--TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-----PRRVDVFQR 280
                T+  ++ G  H +AVD +G  + WG   +G+LG              P +V   Q 
Sbjct: 874  ATNFTLTGISAGITHVLAVDGQGRAWGWGSNEFGKLGVPASTVATTGITTRPVQVATPQG 933

Query: 281  NNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDW---------MYPKPLMD 327
                   A +SAG  +S  T   G+ + WG  +N    N  D          +  KP  +
Sbjct: 934  ETTGFHYAQVSAGGSHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTN 993

Query: 328  LS-GWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSS----AMPKKVDIL 381
             S G+N   + +G+ H     D   I SWG    GELG G    +++    AMP  V   
Sbjct: 994  PSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTF 1053

Query: 382  EGMHVISVACGYGHSLVIVDRTNV 405
              +    V+   G+SL +    N+
Sbjct: 1054 TQLTGSRVS---GNSLALDQNGNI 1074



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 105/262 (40%), Gaps = 33/262 (12%)

Query: 68   CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG--------AGR 119
             H +A D +GR + WG N+ G LG+   +  +  T     +K     +G        AG 
Sbjct: 948  SHSLATDTQGRAWGWGSNQNGALGNTSDVALNGYTTTPVQAKPGTNPSGGFNPAQIIAGS 1007

Query: 120  SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR-----CLVSEVTATACGADFTV 174
             H++ + + G   ++G N +G+LG G       PS V         +++T +    +   
Sbjct: 1008 GHSLALDDLGRIWSWGGNSNGELGLGDTTTRTAPSMVAMPANVSTFTQLTGSRVSGNS-- 1065

Query: 175  WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAG-ETIVK 233
             L+  +  +I   G    G LG G     N              RP  ++  +G +  VK
Sbjct: 1066 -LALDQNGNIWGWGQNSSGMLGTGGTGSLN--------------RPTKMSNPSGIDHFVK 1110

Query: 234  VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
            V  GT HT+AV S G    WG    GRLG+   +  + P  V V     +  P  V   G
Sbjct: 1111 VCAGTGHTLAVASDGSTLGWGDNSQGRLGNNATETVYSP--VSVLFPFRLGTPSTVQFGG 1168

Query: 294  SVNSSCTAGGGQLYMWGKLKNN 315
               +S ++ G Q   W  L  N
Sbjct: 1169 VSGTSLSSTGQQDGAWTVLTPN 1190



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 116/277 (41%), Gaps = 40/277 (14%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC-----LVSEVTA 165
           K  +  +G +H++ +  DG+  A+G N  GQ+G  S    +  +PV+         + T 
Sbjct: 205 KFSQITSGATHSLALGSDGSLYAWGDNSSGQVGDNST--TLRQTPVKTNKPANASDQFTF 262

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
           T   A     L+     ++   G    GQLG GT           KL     P+P   A 
Sbjct: 263 TTIAAGDHSSLAIGSDGNLYAWGNNTRGQLGDGTTEN--------KLTPVKVPKP---AG 311

Query: 226 LAGE-TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD---VFQRN 281
           ++ E T  +V+   +HT+A+ S   +Y WG+ GYG+LG+       VP   D    +   
Sbjct: 312 VSNEFTWTQVSARWDHTLALGSNHNLYAWGWNGYGQLGNTS-----VPTGSDNPAAYSSK 366

Query: 282 NVL--PPEAV----ISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY-PKPLMDLS 329
            VL   P  V    +SAG  +S       QLY W     G+L +  D   + P P+   +
Sbjct: 367 PVLVSTPAGVTFTQLSAGRYHSLALGSDKQLYAWGLNTSGRLGDGTDIQRFTPVPVRQPA 426

Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
           G       +G+   F +  +    +WG   YG LG G
Sbjct: 427 GVTFSQFSAGDTSCFAISTNGDLYAWGWNGYGRLGDG 463



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 5/121 (4%)

Query: 39   ALDGNLVSPTRLRPLVGVDIRFVAAGCV--SCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
            AL+G   +P + +P       F  A  +  S H +A+D  GR ++WG N  G+LG GD  
Sbjct: 977  ALNGYTTTPVQAKPGTNPSGGFNPAQIIAGSGHSLALDDLGRIWSWGGNSNGELGLGDTT 1036

Query: 97   QRDRPTIV---SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
             R  P++V   + +S +          +++ + ++GN   +G N  G LG+G   +   P
Sbjct: 1037 TRTAPSMVAMPANVSTFTQLTGSRVSGNSLALDQNGNIWGWGQNSSGMLGTGGTGSLNRP 1096

Query: 154  S 154
            +
Sbjct: 1097 T 1097


>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
           [Papio anubis]
          Length = 1023

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 197

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++  PS +  L ++ V   ACG   +  L
Sbjct: 198 GEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 258 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGNRVTQIA 300

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+    D+ +P  V V   +  L  E+  S   
Sbjct: 301 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV-SSSEELKLESHTSEKE 359

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 360 L--IMIAGGNQSILLWIKKENS 379



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 14/186 (7%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 154 KGGELFAWGQNLHGQLG--VGRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 210 NVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 270 KHGQLGHNSTQNELRP----CLVAELVGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 324

Query: 193 GQLGHG 198
           GQLG+G
Sbjct: 325 GQLGNG 330



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 79/169 (46%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 191

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G ++ + G  ++GQLG G      +KDS           P  I
Sbjct: 192 LAQISAGEAHSMALSMSG-NVYSWGKNEFGQLGLG---HTESKDS-----------PSLI 236

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            AL  + +  +ACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 285



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R+ + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 129 RSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 188

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G +Y WGK +       + +    P  +  L    +
Sbjct: 189 G----VPLAQISAGEAHSMALSMSGNVYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +ACG
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGNRVTQIACG 302

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 303 RWHTLAYV 310


>gi|168024283|ref|XP_001764666.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684244|gb|EDQ70648.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 401

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 147/350 (42%), Gaps = 63/350 (18%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE--LSKYKIKKA 115
           ++ +A  C   H + +  EGR Y  G N+ GQLG           +  E    + K    
Sbjct: 42  LQPIALACGGAHTLVLTEEGRVYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDEAKFTHI 101

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS----EVTATACGAD 171
            AG  H+  ++EDG    +G N  GQLG G  R + +    + + S     + A A GA+
Sbjct: 102 AAGDFHSAAISEDGRVYMWGRNTQGQLGLGK-RGKGKVCAAQWVESLKDFRIQALALGAE 160

Query: 172 FTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETI 231
            ++ LS  E   +L+ G    G+LGHG  +  ++  S  + + E    PR +       +
Sbjct: 161 HSLALS--EEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYT--PRLVKGFRDVKV 216

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS 291
            KVA G  H+  +D +G ++T+G G   +LG    +D   P+RV       V+PP   I+
Sbjct: 217 SKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVP------VIPPVEEIA 270

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSC 351
            G  ++   +  GQLYMWG                                         
Sbjct: 271 CGGYHTGAISRNGQLYMWGS---------------------------------------- 290

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIV 400
                 +YG LG+G   Q ++++P  V+  LE + V  V CG+ H++ + 
Sbjct: 291 -----NEYGCLGFGYKHQNATSLPMLVEGALESLRVTQVQCGWKHTMALT 335



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 93/213 (43%), Gaps = 26/213 (12%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD------------KIQRDRPTIV 104
           D R  A    + H +A+  EG   +WG +  G+LGHG+            K     P +V
Sbjct: 149 DFRIQALALGAEHSLALSEEGEVLSWGTSLNGRLGHGEGHRSSSMFSIFRKSSEYTPRLV 208

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
                 K+ K  AG +H+  + E G+   FG  +  QLG G  R+  EP  V  ++  V 
Sbjct: 209 KGFRDVKVSKVAAGLTHSACLDEQGSLFTFGKGRECQLGLGGDRDISEPKRVP-VIPPVE 267

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             ACG   T  +S      +   G  +YG LG G  ++  T   S+ +  E         
Sbjct: 268 EIACGGYHTGAIS--RNGQLYMWGSNEYGCLGFGYKHQNAT---SLPMLVEG-------- 314

Query: 225 ALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           AL    + +V CG  HT+A+   G V+ WG+GG
Sbjct: 315 ALESLRVTQVQCGWKHTMALTVDGDVFAWGWGG 347



 Score = 42.0 bits (97), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 15/171 (8%)

Query: 245 DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG- 303
           D   +V  WG G YGRLG    +  W P      Q    L P A+   G+     T  G 
Sbjct: 6   DKHRWVALWGNGDYGRLGQASGESFWEPTVCKSMQH---LQPIALACGGAHTLVLTEEGR 62

Query: 304 ---GQLYMWGKL-----KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
                L  WG+L       +  +++  + L D +      + +G+ H   +  D     W
Sbjct: 63  VYASGLNDWGQLGLPLSTGHSMEFLEVEGLPDEA--KFTHIAAGDFHSAAISEDGRVYMW 120

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           G    G+LG G  G+      + V+ L+   + ++A G  HSL + +   V
Sbjct: 121 GRNTQGQLGLGKRGKGKVCAAQWVESLKDFRIQALALGAEHSLALSEEGEV 171


>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
          Length = 835

 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y+WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 147/330 (44%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P      +  K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   + + GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYSWGLDSDGQLGLL 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              EY      +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEEY------IRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  VACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 84/325 (25%), Positives = 141/325 (43%), Gaps = 31/325 (9%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
            GC   H V V  +G  YT G N+ GQLGH  +  R +P  V  L    I     G +HT
Sbjct: 39  VGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQNIVAVSCGEAHT 96

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVS-EVTATACGADFTVWLSSVE 180
           + + + G   ++G +  GQLG       I  P  ++ L   ++   ACG   ++ LS  +
Sbjct: 97  LALNDKGQVYSWGLDSDGQLGLLGSEEYIRVPRNIKSLSDIQIVQVACGYYHSLALS--K 154

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
            + +   G  +YGQLG G D              + Q  P+ I +L G   ++VA G  H
Sbjct: 155 ASEVFCWGQNKYGQLGLGIDC-------------KKQTSPQLIKSLLGIPFMQVAAGGAH 201

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
           +  +   G ++ WG   +G+LG  ++ D +VP  +   +   ++     I  G  +++  
Sbjct: 202 SFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQKIV----YICCGEDHTAAL 257

Query: 301 AGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
              G ++      +G+L +N     + P+ + +L G  +  +  G  H   FV +     
Sbjct: 258 TKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVTQVACGRQHTSAFVPSSGRIY 317

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKK 377
           S+G    G+LG G    + S    K
Sbjct: 318 SFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 180 SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLLK 237

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 238 SLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 297

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 298 QVACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 331



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 75/215 (34%), Gaps = 66/215 (30%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR     A + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++                    
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVA-------------------- 80

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQK 370
                           L   N+  +  G  H     D   + SWG    G+LG     ++
Sbjct: 81  ----------------LDAQNIVAVSCGEAHTLALNDKGQVYSWGLDSDGQLGLLG-SEE 123

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 124 YIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D   V
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTV 55


>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
          Length = 1024

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 126/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG     ++  PS +  L ++ V   ACG   T  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A LAG  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELAGNRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  + V   N  L  E+  S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKV-SSNEDLKFESHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AG  Q + +W K +N+
Sbjct: 361 L--IMIAGENQSILLWIKKENS 380



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/227 (32%), Positives = 111/227 (48%), Gaps = 29/227 (12%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L G+ +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLG--VGRKFPSTTAPQIVEHLAGIPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG      +D P+++  L   K++    G SHT ++T+DG    FG  
Sbjct: 211 NIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELAGNRVTQIACGRWHTLAYVSDLG-KVFSFGSGKE 325

Query: 193 GQLGHGTDNEYNTKD----------SSVKLAYEAQPRPRAIAALAGE 229
           GQLG+G      T+D          S+  L +E+    + +  +AGE
Sbjct: 326 GQLGNG-----GTRDQLIPLPMKVSSNEDLKFESHTSEKELIMIAGE 367



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLAGIP 192

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  ++GQLG    +   +KDS           P  I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGL---DHTESKDS-----------PSLI 237

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            AL  + +  +ACG +HT  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 238 EALDNQKVEFLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/278 (22%), Positives = 112/278 (40%), Gaps = 41/278 (14%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           KI     G  H ++++ DG    +       L   SI  E           ++    CG 
Sbjct: 98  KIHSMDLGADHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ LS  +G  +   G   +GQLG G               + +   P+ +  LAG  
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTAPQIVEHLAGIP 192

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG--HREQKDEWVPRRVDVFQRNNVLPPEA 288
           + +++ G  H++A+   G +Y+WG   +G+LG  H E KD   P  ++      V     
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDS--PSLIEALDNQKV----E 246

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++ G  +++     G L+ +G  K      N+  + + P  + +L+G  +  +  G  H
Sbjct: 247 FLACGGSHTALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNRVTQIACGRWH 306

Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
              +V       S+G  + G+LG G    +   +P KV
Sbjct: 307 TLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIPLPMKV 344



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R  + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTAPQIVEHLA 189

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G +Y WGK +      ++ +    P  +  L    +
Sbjct: 190 G----IPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLDHTESKDSPSLIEALDNQKV 245

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +ACG
Sbjct: 246 EFLACGGSHTALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELAGNRVTQIACG 303

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 304 RWHTLAYV 311


>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
          Length = 1066

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 24  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 79

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 80  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 139

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 140 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 184

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 185 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 244

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 245 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 299

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 300 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 351



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 13  WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 72

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 73  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 126

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 127 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 175

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 176 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 227

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 228 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 287

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V  VACG  H+   V
Sbjct: 288 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 319



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 27/225 (12%)

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
           S+L  G   YGQLG G  +E            E    PR       + +  V CG  HTV
Sbjct: 9   SMLCWGNASYGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTV 56

Query: 243 AVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAG 302
            V   G VYT G    G+LGH + + +  P +V      N++     ++ G  ++     
Sbjct: 57  FVLDDGTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQNIV----AVACGEAHTLALND 110

Query: 303 GGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISW 354
            GQ+Y WG        L+ + +    P+ +  LS   +  +  G  H   +   S    W
Sbjct: 111 KGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCW 170

Query: 355 GHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G  +YG+LG G   QK ++ P+ +  L G+  + VA G  HS V+
Sbjct: 171 GQNKYGQLGLGIDCQKQTS-PQLIKSLLGIPFMQVAAGGAHSFVL 214



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           S + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D
Sbjct: 9   SMLCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 60


>gi|118363796|ref|XP_001015122.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila]
 gi|89296889|gb|EAR94877.1| regulator of chromosome condensation (RCC1) [Tetrahymena
           thermophila SB210]
          Length = 1387

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 97/403 (24%), Positives = 161/403 (39%), Gaps = 62/403 (15%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K  E+   GS  +  +G  +     N   P         +I F +  C S H + +  +G
Sbjct: 95  KYNEIFVFGSNKYGQIGLSEKNAGKNFCIPR----FCHFNIVFTSVSCGSHHSILLTQDG 150

Query: 78  RCYTWGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
             Y+ G N  GQLG  D  Q +    PT++ +L  Y I K  +G  H + +T +    ++
Sbjct: 151 YAYSIGSNIYGQLG-ADTNQINYSYTPTLIQKLQDYIITKVVSGAYHNIALTNENQLFSW 209

Query: 135 GWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G N  GQLG               +  ++     G + + +++         +GL  YGQ
Sbjct: 210 GRNNEGQLG--------------LVDKKIVNVFSGWNHSFFITKQNELYSFGSGL--YGQ 253

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
           LG G      T D   K+ Y  +           + I+K+ACG  H++ +  +G V+  G
Sbjct: 254 LGQGKCENSITPD---KVLYHEK----------DQKIIKIACGETHSLLLSEQGQVFACG 300

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKL 312
               G+LG    K   V  +       N+   E++  I+ G  + + T     LY WG+ 
Sbjct: 301 ENQRGQLGLGRNKK--VVLQPQYLSNENLFASESIIDIACGRFSVAITQKTQSLYAWGQF 358

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMH--------HFVGADSSCI--------SWGH 356
            +   + +Y   L+    ++      G             VG DS  I        SWG 
Sbjct: 359 CDTDSNPIYTPQLV----FSFNSQKEGKEQPEKNLVKKAVVGGDSCIILMKNGDLYSWGK 414

Query: 357 AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            Q+GE G G +  KS      ++ L+G  V++   G  H++V+
Sbjct: 415 NQFGECGQGDFENKSETF-YPINFLKGKKVLTFHLGEAHTIVL 456



 Score = 62.0 bits (149), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 19/176 (10%)

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK--DEWVPRRVDVFQRNNVLPPEAVIS 291
           V+CG++H++ +   GY Y+ G   YG+LG    +    + P  +   Q   +      + 
Sbjct: 136 VSCGSHHSILLTQDGYAYSIGSNIYGQLGADTNQINYSYTPTLIQKLQDYIITK----VV 191

Query: 292 AGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL-SGWNLRCMDSGNMHHFVGADSS 350
           +G+ ++       QL+ WG+  N G   +  K ++++ SGWN           F+   + 
Sbjct: 192 SGAYHNIALTNENQLFSWGR-NNEGQLGLVDKKIVNVFSGWN--------HSFFITKQNE 242

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILE-GMHVISVACGYGHSLVIVDRTNV 405
             S+G   YG+LG G    ++S  P KV   E    +I +ACG  HSL++ ++  V
Sbjct: 243 LYSFGSGLYGQLGQGKC--ENSITPDKVLYHEKDQKIIKIACGETHSLLLSEQGQV 296


>gi|125549477|gb|EAY95299.1| hypothetical protein OsI_17124 [Oryza sativa Indica Group]
          Length = 1042

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/387 (25%), Positives = 161/387 (41%), Gaps = 49/387 (12%)

Query: 38  GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G++ G+   P  L  LVG    +D++ +A G    H   +  +G  YTWG    G+L   
Sbjct: 241 GSMLGSEDIPKSLPRLVGSAKMLDVQSIACG--ENHAAIITKQGEVYTWGSYSSGRLDQK 298

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEI 151
             +    P +V  L+   +K    G  HT  +T  G    +G   H  G +     RN+ 
Sbjct: 299 VNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQW 358

Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            P      +  ++ +  ACG   T  ++S     +   G   +G LGHG           
Sbjct: 359 FPHKFLGPMDNISVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDT--------- 407

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
                +   RP+ + +L G  +  VACG  HT A+             G ++TWG    G
Sbjct: 408 -----QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRG 462

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN--GD 317
           +LGH ++K + +P  VD     +++     +S G+  +      G ++  G  ++   G+
Sbjct: 463 KLGHADRKMKLLPTCVDSLTAYDLIQ----VSCGTAVTVVLTVTGMVFTIGSSRHGQLGN 518

Query: 318 DWMYPKPLMDLSG----WNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSS 372
                + +  + G      +R + SG+ H  V   S    +WG    G+LG G Y  +SS
Sbjct: 519 PKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYSNRSS 578

Query: 373 AMPKKVDILEGMHVISVACGYGHSLVI 399
             P  V+ LEG  V SV CG+  +  I
Sbjct: 579 --PTLVEALEGRDVESVVCGFNFTAAI 603



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR + +     +  +ACG NH   +  +G VYTWG    GRL  +   +   P+ V+   
Sbjct: 254 PRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLA 313

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNN--GDDWMYPK----PLMD 327
             +V      ++ GS ++      G+L+ WG+      L N+  G +  +P     P+ +
Sbjct: 314 SVHV----KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDN 369

Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           +S   + C   G  H   + +     ++G   +G LG+G    +  A PK+V+ L+G  V
Sbjct: 370 ISVSKIAC---GEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 424

Query: 387 ISVACGYGHSLVIVD 401
            SVACG  H+  IV+
Sbjct: 425 KSVACGPWHTAAIVE 439


>gi|38346811|emb|CAD41378.2| OSJNBa0088A01.18 [Oryza sativa Japonica Group]
 gi|125591414|gb|EAZ31764.1| hypothetical protein OsJ_15916 [Oryza sativa Japonica Group]
          Length = 1041

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 158/391 (40%), Gaps = 57/391 (14%)

Query: 38  GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G++ G+   P  L  LVG    +D++ +A G    H   +  +G  YTWG    G+L   
Sbjct: 240 GSMLGSEDIPKSLPRLVGSAKMLDVQSIACG--ENHAAIITKQGEVYTWGSYSSGRLDQK 297

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEI 151
             +    P +V  L+   +K    G  HT  +T  G    +G   H  G +     RN+ 
Sbjct: 298 VNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQW 357

Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            P      +  ++ +  ACG   T  ++S     +   G   +G LGHG           
Sbjct: 358 FPHKFLGPMDNISVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDT--------- 406

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
                +   RP+ + +L G  +  VACG  HT A+             G ++TWG    G
Sbjct: 407 -----QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRG 461

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
           +LGH ++K + +P  VD     +++     +S G+  +      G ++  G  ++     
Sbjct: 462 KLGHADRKMKLLPTCVDSLTAYDLIQ----VSCGTAVTVVLTVTGMVFTIGSSRHG---- 513

Query: 320 MYPKPLMD----------LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
               P  D          L    +R + SG+ H  V   S    +WG    G+LG G Y 
Sbjct: 514 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 573

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +SS  P  V+ LEG  V SV CG+  +  I
Sbjct: 574 NRSS--PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR + +     +  +ACG NH   +  +G VYTWG    GRL  +   +   P+ V+   
Sbjct: 253 PRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLA 312

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNN--GDDWMYPK----PLMD 327
             +V      ++ GS ++      G+L+ WG+      L N+  G +  +P     P+ +
Sbjct: 313 SVHV----KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDN 368

Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           +S   + C   G  H   + +     ++G   +G LG+G    +  A PK+V+ L+G  V
Sbjct: 369 ISVSKIAC---GEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 423

Query: 387 ISVACGYGHSLVIVD 401
            SVACG  H+  IV+
Sbjct: 424 KSVACGPWHTAAIVE 438


>gi|297831070|ref|XP_002883417.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297329257|gb|EFH59676.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1043

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 161/386 (41%), Gaps = 49/386 (12%)

Query: 37  KGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           K  +  ++++P  L   V +D+  +  G    H   V  +G  +TWG    G+LGHG ++
Sbjct: 232 KETVKTDVLTPRPLESNVVLDVHQIVCGVR--HVALVTRQGEVFTWGEEVGGRLGHGIQV 289

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS 154
              RP +V  L+   I     G  HT VV+  G+  ++G   H  G LG GS  +   P 
Sbjct: 290 DISRPKLVEFLALTNIDFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPK 349

Query: 155 PVRCLVS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSV 210
            V   +   +V + ACG     W S++  A+  +   G   +G LGHG            
Sbjct: 350 RVSGPLEGLQVLSVACG----TWHSALATANGKLFTFGDGAFGVLGHGN----------- 394

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGR 260
               E+   P+ + +L G   VKVAC   HT A+           S   ++TWG G   R
Sbjct: 395 ---RESVSYPKEVQSLNGLKTVKVACSIWHTAAIVEVMGQTGTSMSSRKLFTWGDGDKNR 451

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNN 315
           LGH  ++   +P  V      N       I+ G   +      G ++       G+L N+
Sbjct: 452 LGHGNKETYLLPTCVSSLIDYNF----HKIACGHTFTVALTTSGHVFTMGGTAHGQLGNS 507

Query: 316 GDDWMYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSA 373
             D   P  + D L G  +  +  G+ H   + + S   +WG    G LG+G    K + 
Sbjct: 508 ISDGKLPCLVQDRLVGEFVEEIACGDHHVAVLTSRSEVFTWGKGANGRLGHGDTEDKRT- 566

Query: 374 MPKKVDILEGMHVISVACGYGHSLVI 399
            P  V+ L   HV S++CG   +  I
Sbjct: 567 -PTCVEALRDRHVKSLSCGSNFTSSI 591



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR + +     + ++ CG  H   V  +G V+TWG    GRLGH  Q D   P+ V+   
Sbjct: 242 PRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEVGGRLGHGIQVDISRPKLVEFLA 301

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N+      ++ G  ++   +  G L+ WG       L  +G D   W+  +    L G
Sbjct: 302 LTNI----DFVACGEYHTCVVSTSGDLFSWGDGIHNVGLLGHGSDISHWIPKRVSGPLEG 357

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H     A+    ++G   +G LG+G   ++S + PK+V  L G+  + V
Sbjct: 358 LQVLSVACGTWHSALATANGKLFTFGDGAFGVLGHG--NRESVSYPKEVQSLNGLKTVKV 415

Query: 390 ACGYGHSLVIVD 401
           AC   H+  IV+
Sbjct: 416 ACSIWHTAAIVE 427


>gi|195345961|ref|XP_002039537.1| GM23028 [Drosophila sechellia]
 gi|194134763|gb|EDW56279.1| GM23028 [Drosophila sechellia]
          Length = 725

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 104/224 (46%), Gaps = 19/224 (8%)

Query: 64  GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK--AGAGRSH 121
            C S H  A+   G   TWG+   G+LGHGD   + RP +V  L  Y+      G+G + 
Sbjct: 7   ACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGSGDAQ 66

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
           T+ +T+D N  ++G   +G+LG G       P  +  L    V    CG+ F+V L+  +
Sbjct: 67  TLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFSVALT--K 124

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
             ++   G   + +LGHG+ +                 RP+ +AAL G+ I+ +A G+ H
Sbjct: 125 SGAVYTWGKGDFHRLGHGSVDHVR--------------RPKKVAALQGKKIISIATGSLH 170

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
            VA    G VYTWG    G+LG         PR V   Q  +++
Sbjct: 171 CVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIV 214



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 125/299 (41%), Gaps = 67/299 (22%)

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGA 170
           +     G +H+  +T  G+ L +G  ++G+LG G   +++ P  V  L+       ACG+
Sbjct: 3   VADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAIDIACGS 62

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
                L   +  ++ + G   YG+LG G  +         KL Y+       I +LAG  
Sbjct: 63  GDAQTLCITDDDNVWSWGDGDYGKLGRGGSD-------GCKLPYK-------IESLAGLG 108

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +VKV CG+  +VA+   G VYTWG G + RLGH        P++V   Q   ++     I
Sbjct: 109 VVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIIS----I 164

Query: 291 SAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS 350
           + GS++    +  G++Y WG    + D+                                
Sbjct: 165 ATGSLHCVACSDSGEVYTWG----DNDE-------------------------------- 188

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
                    G+LG G     +   P+ V  L+G H++ V CG  H+L +   + + ERL
Sbjct: 189 ---------GQLGDGTV--TAIQRPRLVAALQGKHIVKVTCGSAHTLAL-STSQLSERL 235



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 11/183 (6%)

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
           ++  +ACG+ H+ A+ + G+V TWG G YGRLGH + +D+  P+ V+       +  +  
Sbjct: 2   SVADIACGSAHSAAITASGHVLTWGKGRYGRLGHGDSEDQLRPKLVEALLGYRAI--DIA 59

Query: 290 ISAGSVNSSCTAGGGQLYMW-----GKLKNNGDD-WMYPKPLMDLSGWNLRCMDSGNMHH 343
             +G   + C      ++ W     GKL   G D    P  +  L+G  +  ++ G+   
Sbjct: 60  CGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKIESLAGLGVVKVECGSQFS 119

Query: 344 FVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                S  + +WG   +  LG+G         PKKV  L+G  +IS+A G  H +   D 
Sbjct: 120 VALTKSGAVYTWGKGDFHRLGHGSVDHVRR--PKKVAALQGKKIISIATGSLHCVACSDS 177

Query: 403 TNV 405
             V
Sbjct: 178 GEV 180



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 87/203 (42%), Gaps = 17/203 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           + P  +  L+G     +A G      + +  +   ++WG  + G+LG G       P  +
Sbjct: 42  LRPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWGDGDYGKLGRGGSDGCKLPYKI 101

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
             L+   + K   G   +V +T+ G    +G     +LG GS+ +   P  V  L   ++
Sbjct: 102 ESLAGLGVVKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKKI 161

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            + A G+   V  S  +   +   G    GQLG GT                A  RPR +
Sbjct: 162 ISIATGSLHCVACS--DSGEVYTWGDNDEGQLGDGT--------------VTAIQRPRLV 205

Query: 224 AALAGETIVKVACGTNHTVAVDS 246
           AAL G+ IVKV CG+ HT+A+ +
Sbjct: 206 AALQGKHIVKVTCGSAHTLALST 228



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 3/135 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P ++  L G+ +  V   C S   VA+   G  YTWG+ +  +LGHG      RP  V+ 
Sbjct: 98  PYKIESLAGLGV--VKVECGSQFSVALTKSGAVYTWGKGDFHRLGHGSVDHVRRPKKVAA 155

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTA 165
           L   KI     G  H V  ++ G    +G N  GQLG G++     P  V  L    +  
Sbjct: 156 LQGKKIISIATGSLHCVACSDSGEVYTWGDNDEGQLGDGTVTAIQRPRLVAALQGKHIVK 215

Query: 166 TACGADFTVWLSSVE 180
             CG+  T+ LS+ +
Sbjct: 216 VTCGSAHTLALSTSQ 230


>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
 gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
          Length = 734

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 172/417 (41%), Gaps = 94/417 (22%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           GA   NL  P ++  L GV I  VA G    + +A+  +G  + WG N  GQLG G   Q
Sbjct: 172 GATRSNL--PVQVPGLSGV-IAVVAGGY---YSLALRSDGTVWAWGDNRYGQLGDGTTTQ 225

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP---- 153
           R  P  V  LS   +    AG  HTV +  DG+  A+G+N +GQLG G+  +  +P    
Sbjct: 226 RAVPVQVLNLSG--VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSRFQPVQVG 283

Query: 154 -SPVRCLVS-EVTATACGADFTVWL----------------------SSVEGASILNAGL 189
            S V  LV+    + A  +D  VW                       S + G   L AG 
Sbjct: 284 LSDVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQSGLSGGVTLVAGY 343

Query: 190 PQ-----------------YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
                              +GQLG GT   +N + S+VK+++ +  R             
Sbjct: 344 KHSLVLRSDGTVWSWGDNVFGQLGDGT---FNPRSSAVKVSWLSLGR------------A 388

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV---------FQRNNV 283
            V+ G  H+V +DS G V+ WG    G+LG+    D  V   V +         F+   V
Sbjct: 389 DVSSGQLHSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLGGSVAVSAGFKHTLV 448

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           L  +  + A  VN     G G L           D   P  +  LSG  +  + +G+ H 
Sbjct: 449 LKADTTVWAWGVNEHGQLGDGTL----------TDRTRPVQVAGLSG--VSAVSAGSYHS 496

Query: 344 F-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             + ++ +  +WG  +YG+LG G         P +V  L G  V++VA G  HSL +
Sbjct: 497 LALRSNGTVWAWGFNRYGQLGDGT--NTDRLQPVQVAGLSG--VVAVAAGDSHSLAL 549



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 155/351 (44%), Gaps = 40/351 (11%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           H V V  +G  + WG N +GQLG G  +    P  V+ LS   +    +G  H++ ++ D
Sbjct: 47  HSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS--GVVSVASGDYHSLGLSSD 104

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G   A+G N  GQLG+G+      P  V+ L   V+    G+ F+  L+     ++   G
Sbjct: 105 GTVWAWGDNTAGQLGNGTASASPVPVRVQNLSGVVS---LGSGFSHGLALRSDGTVWAWG 161

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             +Y QLG+      N               P  +  L+G  ++ V  G  +++A+ S G
Sbjct: 162 DNRYNQLGNVGATRSNL--------------PVQVPGLSG--VIAVVAGGYYSLALRSDG 205

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            V+ WG   YG+LG        VP  V V   + V+     +SAGS ++      G ++ 
Sbjct: 206 TVWAWGDNRYGQLGDGTTTQRAVP--VQVLNLSGVMN----LSAGSFHTVALRSDGSVWA 259

Query: 309 W-----GKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
           W     G+L +      +    + LS  ++  + +GN H   V +D +  +WG  +Y +L
Sbjct: 260 WGFNAYGQLGDGTTTSRFQPVQVGLS--DVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQL 317

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVI 413
           G G     SS +P +  +  G   +++  GY HSLV+     V    D V 
Sbjct: 318 GDGT--TTSSRVPVQSGLSGG---VTLVAGYKHSLVLRSDGTVWSWGDNVF 363



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 80/267 (29%), Positives = 114/267 (42%), Gaps = 41/267 (15%)

Query: 41  DGNLVSPTRLRPLVGVD-IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           DG L   TR   + G+  +  V+AG  S H +A+   G  + WG N  GQLG G    R 
Sbjct: 468 DGTLTDRTRPVQVAGLSGVSAVSAG--SYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRL 525

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           +P  V+ LS   +    AG SH++ +  DG   A+G+N  GQ+G GS      P  V  L
Sbjct: 526 QPVQVAGLSG--VVAVAAGDSHSLALRSDGTVWAWGYNFDGQIGDGSYSWRFLPVQVVGL 583

Query: 160 VSEVTATACG-------ADFTVWLSSVEGASILN--------------AGLPQYGQLGHG 198
              V+ +A G       +D TVW     G+  L               AGL     LG G
Sbjct: 584 SGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTAINKPAPVQVAGLSGVVSLGSG 643

Query: 199 TDNEYNTKDSSVKLA----YEAQ---------PRPRAIAALAGETIVKVACGTNHTVAVD 245
             +    +      A    ++ Q           P  ++ L+G  +V V  G  H++A  
Sbjct: 644 NYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRSTPVRVSGLSG--VVSVVAGDYHSLARR 701

Query: 246 SKGYVYTWGFGGYGRLGHREQKDEWVP 272
           S G V+ WG+ G G+LG   + D  VP
Sbjct: 702 SDGTVWAWGYNGEGQLGDGTRNDTLVP 728



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 151/365 (41%), Gaps = 44/365 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L GV    V+ G    H +A+  +G  + WG N   QLG+    + + P  V  
Sbjct: 129 PVRVQNLSGV----VSLGSGFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVPG 184

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
           LS   +    AG  +++ +  DG   A+G N++GQLG G+      P  V  L S V   
Sbjct: 185 LS--GVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNL-SGVMNL 241

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           + G+  TV L S    S+   G   YGQLG GT                 QP    ++  
Sbjct: 242 SAGSFHTVALRS--DGSVWAWGFNAYGQLGDGTTTS------------RFQPVQVGLS-- 285

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
               ++ +  G  H++AV S G V+ WG   Y +LG        VP +       + L  
Sbjct: 286 ---DVLTLVAGNYHSLAVRSDGAVWAWGDNRYRQLGDGTTTSSRVPVQ-------SGLSG 335

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMYPKPLMDLSGW-NLRCMD--SGNM 341
              + AG  +S      G ++ WG       GD    P+       W +L   D  SG +
Sbjct: 336 GVTLVAGYKHSLVLRSDGTVWSWGDNVFGQLGDGTFNPRSSAVKVSWLSLGRADVSSGQL 395

Query: 342 HHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           H  V  ++ +  +WG    G+LG G       A P  +        ++V+ G+ H+LV+ 
Sbjct: 396 HSVVLDSNGAVWAWGDNYSGQLGNGTGLDSLVAAPVGLG-----GSVAVSAGFKHTLVLK 450

Query: 401 DRTNV 405
             T V
Sbjct: 451 ADTTV 455



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 148/360 (41%), Gaps = 80/360 (22%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           G L + T L  LV   +    +  VS    H + +  +   + WG NE GQLG G    R
Sbjct: 415 GQLGNGTGLDSLVAAPVGLGGSVAVSAGFKHTLVLKADTTVWAWGVNEHGQLGDGTLTDR 474

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
            RP  V+ LS   +    AG  H++ +  +G   A+G+N++GQLG G+  + ++P  V  
Sbjct: 475 TRPVQVAGLSG--VSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNTDRLQPVQVAG 532

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           L S V A A G   ++ L S    ++   G    GQ+G G+              Y  + 
Sbjct: 533 L-SGVVAVAAGDSHSLALRS--DGTVWAWGYNFDGQIGDGS--------------YSWRF 575

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P  +  +    +V V+ G  H++A+ S G V+TWG+ G G+LG                
Sbjct: 576 LP--VQVVGLSGVVSVSAGGYHSLALRSDGTVWTWGYNGSGQLGDGSTA----------- 622

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
               +  P  V  AG                                  LSG  +  + S
Sbjct: 623 ----INKPAPVQVAG----------------------------------LSG--VVSLGS 642

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           GN H   + +D +  +WG    G+LG G    +S+  P +V  L G  V+SV  G  HSL
Sbjct: 643 GNYHSLGLRSDGTVWAWGFNFDGQLGDGSLLNRST--PVRVSGLSG--VVSVVAGDYHSL 698



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 41/290 (14%)

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWL 176
           G+ H+V V  DG   A+G+N+ GQLG G++ +   P+PVR   +S V + A G   ++ L
Sbjct: 44  GQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVD--SPTPVRVTNLSGVVSVASGDYHSLGL 101

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           SS    ++   G    GQLG+GT                A P P  +  L+G  +V +  
Sbjct: 102 SS--DGTVWAWGDNTAGQLGNGT--------------ASASPVPVRVQNLSG--VVSLGS 143

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
           G +H +A+ S G V+ WG   Y +LG+       +P +V        L     + AG   
Sbjct: 144 GFSHGLALRSDGTVWAWGDNRYNQLGNVGATRSNLPVQVP------GLSGVIAVVAGGYY 197

Query: 297 SSCTAGGGQLYMWG--KLKNNGD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADS 349
           S      G ++ WG  +    GD        P  +++LSG  +  + +G+ H   + +D 
Sbjct: 198 SLALRSDGTVWAWGDNRYGQLGDGTTTQRAVPVQVLNLSG--VMNLSAGSFHTVALRSDG 255

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           S  +WG   YG+LG G     S   P +V + +   V+++  G  HSL +
Sbjct: 256 SVWAWGFNAYGQLGDGT--TTSRFQPVQVGLSD---VLTLVAGNYHSLAV 300



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 19/178 (10%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
            +  ++A G  H+V V S G V+ WGF   G+LG     D   P RV        L    
Sbjct: 36  SSAARLALGQYHSVGVHSDGTVWAWGFNRQGQLGDGTLVDSPTPVRV------TNLSGVV 89

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK----NNGDDWMYPKP--LMDLSGWNLRCMDSGNMH 342
            +++G  +S   +  G ++ WG        NG     P P  + +LSG  +  + SG  H
Sbjct: 90  SVASGDYHSLGLSSDGTVWAWGDNTAGQLGNGTASASPVPVRVQNLSG--VVSLGSGFSH 147

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
              + +D +  +WG  +Y +L  G  G   S +P +V  L G  VI+V  G  +SL +
Sbjct: 148 GLALRSDGTVWAWGDNRYNQL--GNVGATRSNLPVQVPGLSG--VIAVVAGGYYSLAL 201


>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 292

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 86/322 (26%), Positives = 138/322 (42%), Gaps = 71/322 (22%)

Query: 83  GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
           G  E G+LG G++   + P  ++   K K+     G  H+ V TE    L +G    G+L
Sbjct: 41  GNGESGRLGLGNENCCNIPKRIN--IKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRL 98

Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
           G+G   +  +P      V++++   CG+D+T  L+      +   G+  YG+LGHG D+ 
Sbjct: 99  GTGDEISRTQPVLPEHKVAQIS---CGSDWTAVLTLA--GKVFTFGVGSYGKLGHGNDSN 153

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                         Q  P+ +  L  E +V ++CG +H  A++ +G V+TWG GG GRLG
Sbjct: 154 --------------QLVPKLVEELDTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLG 199

Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYP 322
           H  ++D   P  V V   N ++     +  G  +   T   G+LYMW             
Sbjct: 200 HGSERDSKKP--VLVKGMNGLVA--LTVECGGYHMGVTTLDGELYMW------------- 242

Query: 323 KPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
                  GWN+                         YG+ G G +  ++   P  V+ L 
Sbjct: 243 -------GWNV-------------------------YGQCGLGLH-VENQLTPVLVEQLR 269

Query: 383 GMHVISVACGYGHSLVIVDRTN 404
           G  V+ VACG  H++ +V   +
Sbjct: 270 GKRVLMVACGESHTMALVSNNS 291



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/235 (28%), Positives = 104/235 (44%), Gaps = 26/235 (11%)

Query: 54  VGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIK 113
           + +  + V   C   H           TWG    G+LG GD+I R +P     L ++K+ 
Sbjct: 62  INIKKKVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQPV----LPEHKVA 117

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADF 172
           +   G   T V+T  G    FG   +G+LG G+  N++ P  V  L +E V + +CGAD 
Sbjct: 118 QISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELDTERVVSLSCGADH 177

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
              L ++EG  +   G    G+LGHG++     +DS          +P  +  + G   +
Sbjct: 178 MAAL-NIEG-DVFTWGCGGNGRLGHGSE-----RDSK---------KPVLVKGMNGLVAL 221

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLG---HREQKDEWVPRRVDVFQRNNVL 284
            V CG  H       G +Y WG+  YG+ G   H E  ++  P  V+  +   VL
Sbjct: 222 TVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVE--NQLTPVLVEQLRGKRVL 274



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 15/200 (7%)

Query: 48  TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSEL 107
           +R +P++  + +     C S     + + G+ +T+G    G+LGHG+   +  P +V EL
Sbjct: 105 SRTQPVL-PEHKVAQISCGSDWTAVLTLAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEEL 163

Query: 108 SKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATA 167
              ++     G  H   +  +G+   +G   +G+LG GS R+  +P  V+ +   V  T 
Sbjct: 164 DTERVVSLSCGADHMAALNIEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVALTV 223

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
               + + +++++G  +   G   YGQ G G             L  E Q  P  +  L 
Sbjct: 224 ECGGYHMGVTTLDG-ELYMWGWNVYGQCGLG-------------LHVENQLTPVLVEQLR 269

Query: 228 GETIVKVACGTNHTVAVDSK 247
           G+ ++ VACG +HT+A+ S 
Sbjct: 270 GKRVLMVACGESHTMALVSN 289


>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
          Length = 1057

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/277 (29%), Positives = 131/277 (47%), Gaps = 38/277 (13%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCQKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+  VF+
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRK--VFE 290

Query: 280 RNNVLPPEA----------VISAGSVNSSCTAGGGQL 306
               +  +A          V S+G + S    G GQL
Sbjct: 291 LMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQL 327



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 149/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +     G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 91/334 (27%), Positives = 140/334 (41%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V   ACG  H+   V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQAACGRQHTSAFV 310



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    A G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.5 bits (88), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51


>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 158/379 (41%), Gaps = 47/379 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           ++++P  L   V +D+  +A G    H   V  +G  +TWG    G+LGHG      RP 
Sbjct: 254 DVLTPKSLESNVVLDVHQIACGVR--HVALVTRQGEVFTWGEESGGRLGHGIDNDFSRPH 311

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  L+   +     G  HT  V+  G+   +G   H  G LG G+  +   P  V   +
Sbjct: 312 LVEFLAVNNVDFVACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGPL 371

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG     W S++  ++  +   G   +G LGHG                E+
Sbjct: 372 EGLQVLSVACG----TWHSALATSNGKLFTFGDGTFGVLGHGD--------------RES 413

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQ 266
            P PR +  L+G   +KVACG  HT A+           S   ++TWG G   RLGH  +
Sbjct: 414 VPYPREVQILSGLKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSK 473

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWMYP 322
           +   +P  V      N      +    ++  + T  G    M    +G+L N   D   P
Sbjct: 474 ETYLLPTCVSALIDYNF---HQLACGHTMTVALTTSGHVFTMGGTAYGQLGNPLSDGRLP 530

Query: 323 KPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
             + D L G  +  +  G  H   + + S   +WG    G LG+G    + S  P  V+ 
Sbjct: 531 CLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDRRS--PTFVEA 588

Query: 381 LEGMHVISVACGYGHSLVI 399
           L+  +V S++CG   +  I
Sbjct: 589 LKDRNVKSISCGSNFTASI 607



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 38/87 (43%), Gaps = 3/87 (3%)

Query: 42  GNLVSPTRLRPLVGVDI--RFVAA-GCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR 98
           GN +S  RL  LV   +   FV    C + H   +      +TWGR   G+LGHGD   R
Sbjct: 521 GNPLSDGRLPCLVQDKLVGEFVEEISCGAYHVAVLTSRSEVFTWGRGANGRLGHGDTEDR 580

Query: 99  DRPTIVSELSKYKIKKAGAGRSHTVVV 125
             PT V  L    +K    G + T  +
Sbjct: 581 RSPTFVEALKDRNVKSISCGSNFTASI 607


>gi|297603248|ref|NP_001053665.2| Os04g0583700 [Oryza sativa Japonica Group]
 gi|255675724|dbj|BAF15579.2| Os04g0583700 [Oryza sativa Japonica Group]
          Length = 1065

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 158/391 (40%), Gaps = 57/391 (14%)

Query: 38  GALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G++ G+   P  L  LVG    +D++ +A G    H   +  +G  YTWG    G+L   
Sbjct: 240 GSMLGSEDIPKSLPRLVGSAKMLDVQSIACG--ENHAAIITKQGEVYTWGSYSSGRLDQK 297

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEI 151
             +    P +V  L+   +K    G  HT  +T  G    +G   H  G +     RN+ 
Sbjct: 298 VNVNASCPKMVESLASVHVKAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQW 357

Query: 152 EPSPVRCLVSEVTAT--ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
            P      +  ++ +  ACG   T  ++S     +   G   +G LGHG           
Sbjct: 358 FPHKFLGPMDNISVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDT--------- 406

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWGFGGYG 259
                +   RP+ + +L G  +  VACG  HT A+             G ++TWG    G
Sbjct: 407 -----QGVARPKEVESLKGSRVKSVACGPWHTAAIVEVMSSFKGNAPSGKLFTWGDADRG 461

Query: 260 RLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDW 319
           +LGH ++K + +P  VD     +++     +S G+  +      G ++  G  ++     
Sbjct: 462 KLGHADRKMKLLPTCVDSLTAYDLIQ----VSCGTAVTVVLTVTGMVFTIGSSRHG---- 513

Query: 320 MYPKPLMD----------LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYG 368
               P  D          L    +R + SG+ H  V   S    +WG    G+LG G Y 
Sbjct: 514 QLGNPKADGESICSVEGPLKTEFVREISSGSSHVAVLTMSGKVFTWGKGAEGQLGLGDYS 573

Query: 369 QKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            +SS  P  V+ LEG  V SV CG+  +  I
Sbjct: 574 NRSS--PTLVEALEGRDVESVVCGFNFTAAI 602



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR + +     +  +ACG NH   +  +G VYTWG    GRL  +   +   P+ V+   
Sbjct: 253 PRLVGSAKMLDVQSIACGENHAAIITKQGEVYTWGSYSSGRLDQKVNVNASCPKMVESLA 312

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNN--GDDWMYPK----PLMD 327
             +V      ++ GS ++      G+L+ WG+      L N+  G +  +P     P+ +
Sbjct: 313 SVHV----KAVAFGSKHTCAITVSGELFEWGEGAHSLGLMNDWYGRNQWFPHKFLGPMDN 368

Query: 328 LSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHV 386
           +S   + C   G  H   + +     ++G   +G LG+G    +  A PK+V+ L+G  V
Sbjct: 369 ISVSKIAC---GEWHTAIITSSGQLFTYGDGTFGVLGHG--DTQGVARPKEVESLKGSRV 423

Query: 387 ISVACGYGHSLVIVD 401
            SVACG  H+  IV+
Sbjct: 424 KSVACGPWHTAAIVE 438


>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
          Length = 1057

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V  VACG  H+   V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    A G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51


>gi|356549747|ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/367 (27%), Positives = 152/367 (41%), Gaps = 36/367 (9%)

Query: 25  CGSTCWDAVGRRKGALDGNLVSPTRLR--PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
           CGS     +G  +G+     V+ TR+   PL     R V       H   V   G  +T 
Sbjct: 134 CGSGLCGVLG--QGSETTQCVAFTRIDFPPLA----RVVHVSASFNHAAFVMQSGEVFTC 187

Query: 83  GRNERGQLGHGDKIQR-DRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           G N     GH D  +   RP +V  L     K+  AG + TV +T  G+    G N HGQ
Sbjct: 188 GDNSSSCCGHRDTTRPIFRPRLVESLKGIPCKQVAAGLNFTVFLTRKGHVYTCGTNTHGQ 247

Query: 142 LGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDN 201
           LG G  ++   P  +  L S V   A G  +   LS  E  ++ + G      LGHG  +
Sbjct: 248 LGHGDTQDRPTPKMIEVL-SSVVQIAAGPSYI--LSVTENGTVYSFGSGANFCLGHGEQH 304

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
           +            E QPR        G  IV+V+ G  H VA+DS GYVYTWG G  G L
Sbjct: 305 D------------ELQPRAIQKFRRKGIHIVRVSAGDEHAVALDSNGYVYTWGKGYCGAL 352

Query: 262 GHREQKDEWVPRRVDVFQRNNVLPPEA-------VISAGSVNSSCTAGGGQLYMWGKLKN 314
           GH ++ ++  P  +   +   V+   A       ++ +GSV    + G G L      + 
Sbjct: 353 GHGDEIEKTTPELLTSLKNQLVVQVCARKRKTFVLVDSGSVYGFGSMGFGSLGFLD--RR 410

Query: 315 NGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSA 373
             D  + P+ L  L   ++  + +G  H  V  +      +G  +  +LG+     +S  
Sbjct: 411 VSDKVLKPRILDTLRTHHVSQISTGLYHTVVITSRGQIFGFGDNERAQLGHDTL--RSCL 468

Query: 374 MPKKVDI 380
            P ++ I
Sbjct: 469 EPTEIFI 475


>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
 gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
          Length = 1057

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P R    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRRSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/334 (27%), Positives = 141/334 (42%), Gaps = 42/334 (12%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A ACG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVACGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLG-----HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G+LG      ++   + +   + +        P   ++AG  +S      G ++ WG+ K
Sbjct: 167 GQLGLGIDCQKQTSPQLIKSLLGI--------PFMQVAAGGAHSFVLTLSGAIFGWGRNK 218

Query: 314 ------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGP 366
                 N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+  
Sbjct: 219 FGQLGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNS 278

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  P+KV  L G  V  VACG  H+   V
Sbjct: 279 TSHEIN--PRKVFELMGSIVTQVACGRQHTSAFV 310



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    A G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVACG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P++ D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLD 51


>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
 gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
          Length = 1120

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 159/381 (41%), Gaps = 44/381 (11%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           L  +++ P  L   + +DI  +A G    H   V  +G  +TWG    G+LGHG      
Sbjct: 265 LRTDVLLPRPLESNIVLDIHHIACGVR--HAALVTRQGEVFTWGEESGGRLGHGVVKDVI 322

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVR 157
           +P +V  L+   I     G  HT  VT  G    +G   H  G LG GS  +   P  V 
Sbjct: 323 QPRMVESLAASSIGFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVS 382

Query: 158 CLVS--EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
             +   +VT+  CG   T  ++S+    +   G   +G LGHG D E         ++Y 
Sbjct: 383 GPLEGLQVTSVTCGPWHTALVTSM--GQLFTFGDGTFGALGHG-DRE--------NISY- 430

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLGHR 264
               P+ + +L+G   + VACG  HT AV            S G ++TWG G   RLGH 
Sbjct: 431 ----PKEVESLSGLRTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHG 486

Query: 265 EQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDDWM 320
           +++    P  V      +      V    S+    T  G    M    +G+L N   D  
Sbjct: 487 DKEPRLKPTCVPALIDYDF---HKVACGHSITVGLTTSGQVFSMGSTVYGQLGNPSADGK 543

Query: 321 YPKPLMD-LSGWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
            P  + D L G ++  +  G  H  V  + +   +WG    G LG+G    + +  P  V
Sbjct: 544 IPCLVEDKLFGESVEEVSCGAYHVVVLTSKNEVYTWGKGANGRLGHGDVEDRKT--PTLV 601

Query: 379 DILEGMHVISVACGYGHSLVI 399
           + L+  HV  +ACG  ++  I
Sbjct: 602 EALKDRHVKYIACGSNYTAAI 622



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR + +     I  +ACG  H   V  +G V+TWG    GRLGH   KD   PR V+   
Sbjct: 272 PRPLESNIVLDIHHIACGVRHAALVTRQGEVFTWGEESGGRLGHGVVKDVIQPRMVESLA 331

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
            +++      ++ G  ++      G+LY WG       L  +G D   W+  +    L G
Sbjct: 332 ASSI----GFVACGEFHTCAVTITGELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEG 387

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H   V +     ++G   +G LG+G   +++ + PK+V+ L G+  I+V
Sbjct: 388 LQVTSVTCGPWHTALVTSMGQLFTFGDGTFGALGHG--DRENISYPKEVESLSGLRTIAV 445

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 446 ACGVWHTAAVVE 457


>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1139

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 156/374 (41%), Gaps = 45/374 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   + +D++ +A  C   H V V  +G  ++WG    G+LGHG       P ++  
Sbjct: 337 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA 394

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
           L+   I+    G  H+  VT  G+   +G    G LG G+  +   P  V  L+    V+
Sbjct: 395 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 454

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + ACG   T  ++S     +   G   +G LGHG          SV +       PR + 
Sbjct: 455 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SVFI-------PREVD 498

Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           +L G   V+ ACG  HT AV             S G ++TWG G   RLGH +++ + VP
Sbjct: 499 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 558

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
             V       V P    ++ G   +      G +Y     ++G+L N   D   P  +  
Sbjct: 559 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDG 614

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L    +  +  G  H   + + +   +WG    G LG+G    ++S  P  V+ L+   
Sbjct: 615 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS--PTLVESLKDKQ 672

Query: 386 VISVACGYGHSLVI 399
           V S+ACG   +  +
Sbjct: 673 VKSIACGSNFTAAV 686



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 66/243 (27%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG    V L + +G S  + G    G+LGHG D+                 
Sbjct: 344 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNVQ-------------- 387

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P+ I AL    I  VACG  H+ AV   G +YTWG G +G LGH  +   WVP+RV+  
Sbjct: 388 HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 447

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                +   + I+ G  +++     GQL+                               
Sbjct: 448 MEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 473

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         ++G   +G LG+G   +KS  +P++VD L+G+  +  ACG  H+  
Sbjct: 474 --------------TFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVRAACGVWHTAA 517

Query: 399 IVD 401
           +V+
Sbjct: 518 VVE 520


>gi|302784100|ref|XP_002973822.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
 gi|300158154|gb|EFJ24777.1| hypothetical protein SELMODRAFT_100519 [Selaginella moellendorffii]
          Length = 413

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 42/338 (12%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  ++G+LG  +   +  P +   L  ++      G +HT+++T+ G   A G N  GQ
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92

Query: 142 LGSGSIR-NEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG    R +  +P  V          A G   +  ++S     +   G    GQLG G  
Sbjct: 93  LGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVW--GRNSEGQLGLG-- 148

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
                     K A      P+ + +LAG  +  +A GT+H++ +   G V +WG   +G 
Sbjct: 149 ----------KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFGC 198

Query: 261 LGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           LGH E           +E+ PR +   ++  +      +SAG V+S+C    G +Y +G+
Sbjct: 199 LGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQIRS----VSAGLVHSACADDSGTIYSFGQ 254

Query: 312 -------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELG 363
                  L NN +D   P P+ DL    +  +  G  H   +  D    +WG  ++G LG
Sbjct: 255 GSMCQLGLGNN-NDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTWGSNEHGCLG 311

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               G ++S+ P +++ L    +  ++CG+ H+  I D
Sbjct: 312 ---SGFRASSKPLRLESLAEAFMSEISCGWKHTAAISD 346



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 30/222 (13%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---------K 95
           ++P ++  L G+ ++ +A G  + H + +   G+  +WG N  G LGHG+          
Sbjct: 156 ITPQKMESLAGMRLKALALG--TDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKD 213

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
                P I+  L K +I+   AG  H+    + G   +FG     QLG G+  +  +P P
Sbjct: 214 TNEYTPRIIHCLEKLQIRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP 273

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           +  L   V++ +CG   T  ++  +   I   G  ++G LG G               + 
Sbjct: 274 IPDL-PRVSSISCGGYHTGAIT--QDGDIYTWGSNEHGCLGSG---------------FR 315

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           A  +P  + +LA   + +++CG  HT A+ S GY+++WG+GG
Sbjct: 316 ASSKPLRLESLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGG 356



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 142/363 (39%), Gaps = 39/363 (10%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C   H + +  +GR +  G N  GQLG   K +     +             AGR H+  
Sbjct: 68  CGGAHTLILTDKGRVFATGLNSSGQLGVPLKRESSFDPVEVHGFPDPCVHIAAGRYHSAA 127

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
           +T  G +  +G N  GQLG G       I P  +  L    + A A G D ++ L+  E 
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ET 185

Query: 182 ASILNAGLPQYGQLGHGTDNEYNT--KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
             +L+ G  ++G LGHG    +    KD++       +  PR I  L    I  V+ G  
Sbjct: 186 GQVLSWGTNRFGCLGHGEMTGFFDFFKDTN-------EYTPRIIHCLEKLQIRSVSAGLV 238

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H+   D  G +Y++G G   +LG     D   P  +        LP  + IS G  ++  
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP------DLPRVSSISCGGYHTGA 292

Query: 300 TAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
               G +Y WG      L +       P  L  L+   +  +  G  H    +D    SW
Sbjct: 293 ITQDGDIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAAISDGYIFSW 352

Query: 355 G------------HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           G             +  G+LG G        +P ++D  + +  + V+CG+ H+  I++ 
Sbjct: 353 GWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMD--DRLSALHVSCGFNHTAAILEE 410

Query: 403 TNV 405
             +
Sbjct: 411 IEI 413



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R  +  C   H  A+  +G  YTWG NE G LG G +    +P  +  L++  + +   G
Sbjct: 279 RVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCG 337

Query: 119 RSHTVVVTEDGNSLAFGW------------NKHGQLGSGSIRNEIEPSPVR 157
             HT  ++ DG   ++GW            +  GQLG G+  +  EP P+ 
Sbjct: 338 WKHTAAIS-DGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIE 387



 Score = 42.7 bits (99), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 67/190 (35%), Gaps = 49/190 (25%)

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           +Q  P    AL       V+CG  HT+ +  KG V+  G    G+LG   +++       
Sbjct: 48  SQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKRES----SF 103

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRC 335
           D  + +    P   I+AG  +S+     G+ Y+                           
Sbjct: 104 DPVEVHGFPDPCVHIAAGRYHSAAITSSGETYV--------------------------- 136

Query: 336 MDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
                             WG    G+LG G   +     P+K++ L GM + ++A G  H
Sbjct: 137 ------------------WGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDH 178

Query: 396 SLVIVDRTNV 405
           SL + +   V
Sbjct: 179 SLGLAETGQV 188


>gi|380029875|ref|XP_003698590.1| PREDICTED: uncharacterized protein LOC100869963 [Apis florea]
          Length = 1858

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 77/245 (31%), Positives = 115/245 (46%), Gaps = 21/245 (8%)

Query: 56   VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
            ++I  ++  C  CH +AV   G  Y WG ++ GQLG G  +Q   P +++ L++  I  A
Sbjct: 869  MEIEVLSVSCGHCHTLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDA 927

Query: 116  GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA-TACGADFTV 174
             AG+ H+V +T DG    +GW  HGQLG G+   ++ P+ V  L+  V      G   T+
Sbjct: 928  VAGQYHSVALTSDGRVFTWGWGVHGQLGHGNTDKKMTPTLVTSLLGIVIRFITAGHAHTL 987

Query: 175  WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
             LS+ EG  I   G   +GQLG G     N   SSV            I     E I+ +
Sbjct: 988  ALST-EGI-IYAFGCNIFGQLGVG-----NNIKSSV-----------PIKVSLSERIILI 1029

Query: 235  ACGTNHTVAVDSKGYVYTWGFG-GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAG 293
            A G  H +AV     +Y WG      RL  + QK   +  + D+ Q  N+   E V  + 
Sbjct: 1030 ATGYFHNLAVSCTNKLYIWGASPQVLRLQAQTQKRTRILEQRDIKQLENIDEFEKVADST 1089

Query: 294  SVNSS 298
            ++N +
Sbjct: 1090 NMNDT 1094



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/250 (27%), Positives = 113/250 (45%), Gaps = 27/250 (10%)

Query: 65   CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR-DRPTIVS--ELSKYKIKKAGAGRSH 121
            C     VA+   G  YTWG + +G LG G  + R   P ++S   + + ++     G  H
Sbjct: 823  CAGFSHVALIRNGNVYTWGSSVQGCLGTGPSVLRYGSPQVISFFWIMEIEVLSVSCGHCH 882

Query: 122  TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADF-TVWLSSVE 180
            T+ VT +G   A+G ++ GQLG G I     P  +  L  EV   A    + +V L+S  
Sbjct: 883  TLAVTNNG-VYAWGSSQFGQLGLGKILQCSTPELITSLAQEVIIDAVAGQYHSVALTS-- 939

Query: 181  GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
               +   G   +GQLGHG  ++  T              P  + +L G  I  +  G  H
Sbjct: 940  DGRVFTWGWGVHGQLGHGNTDKKMT--------------PTLVTSLLGIVIRFITAGHAH 985

Query: 241  TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            T+A+ ++G +Y +G   +G+LG        VP +V + +R        +I+ G  ++   
Sbjct: 986  TLALSTEGIIYAFGCNIFGQLGVGNNIKSSVPIKVSLSER------IILIATGYFHNLAV 1039

Query: 301  AGGGQLYMWG 310
            +   +LY+WG
Sbjct: 1040 SCTNKLYIWG 1049



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 63/246 (25%), Positives = 107/246 (43%), Gaps = 28/246 (11%)

Query: 45   VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            ++PT +  L+G+ IRF+ AG    H +A+  EG  Y +G N  GQLG G+ I+   P  V
Sbjct: 963  MTPTLVTSLLGIVIRFITAG--HAHTLALSTEGIIYAFGCNIFGQLGVGNNIKSSVPIKV 1020

Query: 105  SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL----GSGSIRNEI-EPSPVRCL 159
            S LS+ +I     G  H + V+   N L + W    Q+         R  I E   ++ L
Sbjct: 1021 S-LSE-RIILIATGYFHNLAVSCT-NKL-YIWGASPQVLRLQAQTQKRTRILEQRDIKQL 1076

Query: 160  --VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK--------DSS 209
              + E    A   +    ++      + N    +  Q   G + E   K        + +
Sbjct: 1077 ENIDEFEKVADSTN----MNDTNEEVLENDAQNKNAQAKSGINTESRRKQLDNVCLRNVN 1132

Query: 210  VKLAYEAQP--RPRAI-AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
            V    E Q   +P  +  +L    I++++ G +H   V   G +YTWG    G++G+  +
Sbjct: 1133 VGSLEETQTHLKPTIVDTSLVKGNIIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSR 1192

Query: 267  KDEWVP 272
            ++  +P
Sbjct: 1193 REVPIP 1198



 Score = 49.7 bits (117), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 13/170 (7%)

Query: 100  RPTIV-SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC 158
            +PTIV + L K  I +   G  H  +VT+DG+   +G N  GQ+G+GS R    P+P+ C
Sbjct: 1144 KPTIVDTSLVKGNIIQISTGCHHNALVTKDGSLYTWGRNLDGQIGNGSRREVPIPTPL-C 1202

Query: 159  LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
                            +    E   I ++      +      NE  ++++      E++ 
Sbjct: 1203 YNPVSIFAQVPPRHNAYKRVGEEQEIDDSIKNITSEKNGNVHNEIKSENN------ESRE 1256

Query: 219  RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
            +  AI    G     V CG ++T+A+   G V  WG     +LG    KD
Sbjct: 1257 KINAIIKTVG-----VYCGYDYTIAIQPGGTVLAWGNNSRAQLGRLPAKD 1301



 Score = 38.1 bits (87), Expect = 8.0,   Method: Composition-based stats.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 16/162 (9%)

Query: 46   SPTRLRP------LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
            + T L+P      LV  +I  ++ GC   H   V  +G  YTWGRN  GQ+G+G + +  
Sbjct: 1139 TQTHLKPTIVDTSLVKGNIIQISTGC--HHNALVTKDGSLYTWGRNLDGQIGNGSRREVP 1196

Query: 100  RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI--EPSPVR 157
             PT +   +   I      R +      +   +           +G++ NEI  E +  R
Sbjct: 1197 IPTPLC-YNPVSIFAQVPPRHNAYKRVGEEQEIDDSIKNITSEKNGNVHNEIKSENNESR 1255

Query: 158  CLVSEVTATA---CGADFTVWLSSVEGASILNAGLPQYGQLG 196
              ++ +  T    CG D+T+ +    G ++L  G     QLG
Sbjct: 1256 EKINAIIKTVGVYCGYDYTIAIQP--GGTVLAWGNNSRAQLG 1295


>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 1053

 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/277 (28%), Positives = 120/277 (43%), Gaps = 36/277 (12%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAG 188
           L +G    GQLG G I  E+   P RC   E   V    CG   TV+L  +E  ++   G
Sbjct: 2   LCWGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFL--LEDGTVYTCG 59

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +A+ +P  + +L  + IV V+CG  HT+A++ KG
Sbjct: 60  CNDLGQLGHE----------------KARKKPEQVVSLDAQNIVAVSCGEAHTLALNDKG 103

Query: 249 YVYTWGFGGYGRLGHREQKDEW-VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V+ WG G  G+LG    +D   VPR V      ++      ++ G  +S   A GG+++
Sbjct: 104 QVFAWGLGSDGQLGLSIVEDCLRVPRTVKSLSEVHI----TQVACGYWHSLALARGGEIF 159

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG+       L   G     P+ +  L G     + +G  H F +    +   WG  ++
Sbjct: 160 SWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKF 219

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG G    +    P  +  L    V+ + CG  H+
Sbjct: 220 GQLGLGDNDDRR--FPVLLKTLRSQQVVYICCGEDHT 254



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 143/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G GR HTV + EDG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLLEDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R +  P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKARKK--PEQVVSLDAQNIVAVSCGEAHTLALN--DKGQVFAWGLGSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      + +  +    PR + +L+   I +VACG  H++A+   G +++WG   Y
Sbjct: 118 -----------LSIVEDCLRVPRTVKSLSEVHITQVACGYWHSLALARGGEIFSWGQNKY 166

Query: 259 GRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG  +Q      P+ +   Q      P   ISAG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGQQGACVCSPQVIQSLQG----IPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
              + DD  +P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+L  +
Sbjct: 283 VN--PRKVFELMGSVVSQIACGRQHTLAFI 310



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 77/263 (29%), Positives = 120/263 (45%), Gaps = 39/263 (14%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD---RPTIVSELSKYKIKKAGA 117
           VA  C   H +A++ +G+ + WG    GQLG    I  D    P  V  LS+  I +   
Sbjct: 87  VAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLS--IVEDCLRVPRTVKSLSEVHITQVAC 144

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEI-EPSPVRCL--VSEVTATACGA-DFT 173
           G  H++ +   G   ++G NK+GQLG G     +  P  ++ L  +     +A GA  F 
Sbjct: 145 GYWHSLALARGGEIFSWGQNKYGQLGLGQQGACVCSPQVIQSLQGIPFGQISAGGAHSFG 204

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + LS     +I   G  ++GQLG G +++              +  P  +  L  + +V 
Sbjct: 205 LTLS----GAIFGWGRNKFGQLGLGDNDD--------------RRFPVLLKTLRSQQVVY 246

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ----------RNNV 283
           + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V              R + 
Sbjct: 247 ICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHT 306

Query: 284 LPPEAVISAGSVNSSCTAGGGQL 306
           L    + S+G ++S    G GQL
Sbjct: 307 LA--FIPSSGKIDSFGLGGNGQL 327



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/343 (25%), Positives = 141/343 (41%), Gaps = 31/343 (9%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           L+ P R     G  +R V  GC   H V +  +G  YT G N+ GQLGH     R +P  
Sbjct: 22  LLEPRRCEFFEGKRVRDV--GCGRRHTVFLLEDGTVYTCGCNDLGQLGHEKA--RKKPEQ 77

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE 162
           V  L    I     G +HT+ + + G   A+G    GQLG   + + +  P  V+ L SE
Sbjct: 78  VVSLDAQNIVAVSCGEAHTLALNDKGQVFAWGLGSDGQLGLSIVEDCLRVPRTVKSL-SE 136

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V  T     +   L+   G  I + G  +YGQLG G                     P+ 
Sbjct: 137 VHITQVACGYWHSLALARGGEIFSWGQNKYGQLGLGQQG-------------ACVCSPQV 183

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           I +L G    +++ G  H+  +   G ++ WG   +G+LG  +  D   P  +   +   
Sbjct: 184 IQSLQGIPFGQISAGGAHSFGLTLSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQ 243

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDLSGWNLRCM 336
           V+     I  G  +++     G ++      +G+L +N  +  + P+ + +L G  +  +
Sbjct: 244 VV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSVVSQI 299

Query: 337 DSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
             G  H   F+ +     S+G    G+LG      + S  P K
Sbjct: 300 ACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPVK 342



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 85/180 (47%), Gaps = 6/180 (3%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           +GGE+   G   +  +G   G     + SP  ++ L G+    ++AG    H   + + G
Sbjct: 154 RGGEIFSWGQNKYGQLGL--GQQGACVCSPQVIQSLQGIPFGQISAG--GAHSFGLTLSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WGRN+ GQLG GD   R  P ++  L   ++     G  HT  +T++G    FG  
Sbjct: 210 AIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQQVVYICCGEDHTAALTKEGGVFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
            +GQLG  S  +E+ P  V  L+ S V+  ACG   T+      G  I + GL   GQLG
Sbjct: 270 GYGQLGHNSTNHEVNPRKVFELMGSVVSQIACGRQHTLAFIPSSG-KIDSFGLGGNGQLG 328


>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
           distachyon]
          Length = 1023

 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/392 (26%), Positives = 157/392 (40%), Gaps = 49/392 (12%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           D +G    + D     P  +     +D++ +A G    H   V   G  ++WG      L
Sbjct: 237 DVLGSMLDSEDIPKALPRLVASTTMLDVQSIACG--ENHAAIVTKLGEVFSWGNESSRTL 294

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIR 148
           GH        P +V  L+   +K    G  HT  VT  G  L +  G ++ G L +   R
Sbjct: 295 GHQINDSVSCPKLVEALASVHVKAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYER 354

Query: 149 NEIEPS----PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYN 204
           N+  P     P+  +   V+  ACG   T  ++S     +   G   +G LGHG      
Sbjct: 355 NQWSPHKLFGPMDSI--SVSKIACGEWHTAIITS--SGQLFTYGDGTFGVLGHGDK---- 406

Query: 205 TKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYTWG 254
                     +   RP+ + +L G  +  VACG  HT AV             G ++TWG
Sbjct: 407 ----------QGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKLFTWG 456

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN 314
               G+LGH ++K + VP  VD+    + L     +S G+  +      G ++  G  K+
Sbjct: 457 DADRGKLGHADKKIKLVPTCVDLLTSYDFLQ----VSCGAALTVVLTSTGVVFTIGSSKH 512

Query: 315 ------NGDDWMYPKPLMDLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPY 367
                 + D          L    +R + SG+ H   +       +WG    G+LG G Y
Sbjct: 513 GQLGNPHADGESICTVEGTLKNEFVREISSGSSHVAVLTLKGQVFTWGKGADGQLGLGDY 572

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +SS  P  V+ L+G HV S+ACG   S  +
Sbjct: 573 DNRSS--PTLVEALQGRHVQSIACGSNFSAAV 602



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 78/280 (27%), Positives = 118/280 (42%), Gaps = 39/280 (13%)

Query: 20  GELLFCGSTCWDAVGRRKGAL----DGNLVSPTRLR-PLVGVDIRFVAAGCVSCHCVAVD 74
           GELL      W     R G L    + N  SP +L  P+  + +  +A G    H   + 
Sbjct: 333 GELLE-----WSEGAHRLGLLSNWYERNQWSPHKLFGPMDSISVSKIACG--EWHTAIIT 385

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSL-- 132
             G+ +T+G    G LGHGDK    RP  V  L   ++K    G  HT  V E  +S   
Sbjct: 386 SSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKSVACGPWHTAAVVEVTSSFNC 445

Query: 133 ------AFGWN--KHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGAS 183
                  F W     G+LG    + ++ P+ V  L S +    +CGA  TV L+S     
Sbjct: 446 NAPSGKLFTWGDADRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTST--GV 503

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G  ++GQLG    N +   +S   +             L  E + +++ G++H   
Sbjct: 504 VFTIGSSKHGQLG----NPHADGESICTVE----------GTLKNEFVREISSGSSHVAV 549

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
           +  KG V+TWG G  G+LG  +  +   P  V+  Q  +V
Sbjct: 550 LTLKGQVFTWGKGADGQLGLGDYDNRSSPTLVEALQGRHV 589



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 87/195 (44%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR +A+     +  +ACG NH   V   G V++WG      LGH+       P+ V+   
Sbjct: 253 PRLVASTTMLDVQSIACGENHAAIVTKLGEVFSWGNESSRTLGHQINDSVSCPKLVEALA 312

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMW-------GKLKN--NGDDWMYPKPLMDLSG 330
             +V      ++ GS ++      G+L  W       G L N    + W   K    +  
Sbjct: 313 SVHV----KAVAFGSKHTCAVTVSGELLEWSEGAHRLGLLSNWYERNQWSPHKLFGPMDS 368

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   + +     ++G   +G LG+G   ++  A PK+V+ L+G+ V SV
Sbjct: 369 ISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHG--DKQGIARPKEVESLKGLRVKSV 426

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  H+  +V+ T+
Sbjct: 427 ACGPWHTAAVVEVTS 441


>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
          Length = 1385

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 101/376 (26%), Positives = 152/376 (40%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG      +P ++  
Sbjct: 346 PKPLEFAVKLDVQNIS--CGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDA 403

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           L+   I+    G  HT  VT  G+   +  G +  G LG G+  +   P  V   +    
Sbjct: 404 LANMNIELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 463

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V+A +CG   T  ++S     +   G   +G LGHG     +               PR 
Sbjct: 464 VSAISCGPWHTAIVTS--AGQLFTFGDGSFGVLGHGDRQSLSV--------------PRE 507

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH ++    
Sbjct: 508 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRL 567

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    I+ G   +      G +Y     ++G+L N   D M P  +
Sbjct: 568 VPTCVAAL----VEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRV 623

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G    +SS  P  V+ L+ 
Sbjct: 624 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGDTDDRSS--PTLVESLKD 681

Query: 384 MHVISVACGYGHSLVI 399
             V +V CG   +  I
Sbjct: 682 KQVRTVVCGINFTAAI 697



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ +       +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D   
Sbjct: 346 PKPLEFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGHGVDCDVPQPKLIDALA 405

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG---------DDWMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG   +N            W+  +    L G
Sbjct: 406 NMNI----ELVACGEYHTCAVTLSGDLYTWGNGTSNSGLLGHGNEVSHWVPKRVNGPLEG 461

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   V +     ++G   +G LG+G   ++S ++P++V+ L+G+  +  
Sbjct: 462 IHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHG--DRQSLSVPREVESLKGLRTVRA 519

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 520 ACGVWHTAAVVE 531



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 92/218 (42%), Gaps = 37/218 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQL 90
           +L  P  +  L G  +R V A C   H  AV               G+ +TWG  ++G+L
Sbjct: 501 SLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRL 558

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GS 146
           GHGDK  R  PT V+ L +    +   G   TV +T  G+    G   +GQLG+    G 
Sbjct: 559 GHGDKDTRLVPTCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGM 618

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   +E    +  V E++   CGA     L+S     +   G    G+LGHG     +T 
Sbjct: 619 LPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHG-----DTD 668

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
           D S          P  + +L  + +  V CG N T A+
Sbjct: 669 DRS---------SPTLVESLKDKQVRTVVCGINFTAAI 697


>gi|159040146|ref|YP_001539399.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
 gi|157918981|gb|ABW00409.1| regulator of chromosome condensation, RCC1 [Salinispora arenicola
           CNS-205]
          Length = 555

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/357 (27%), Positives = 143/357 (40%), Gaps = 69/357 (19%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
            +P  ++   G  +  +A G  + H +A+   G    WG N  G+LG G    R+ P  V
Sbjct: 128 TTPVAVKLPTGTTVTAIAVG--TFHTLALTSTGALLAWGGNGFGELGDGTTTARNEPVPV 185

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEV 163
           +  +   I     GR H++ +T  G  LA+G N  GQLG G+  N   P  V     + V
Sbjct: 186 NVPAGTTITAIAGGRGHSLALTSTGTVLAWGKNNEGQLGDGTNANSTTPVDVDLPPGTTV 245

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           TA A G   +  L+S    ++L  GL   GQ+G GT     T D S  +  +  P     
Sbjct: 246 TAIAGGGSNSFALTSA--GTVLAWGLNSSGQVGDGT-----TTDRSTPVDVDLPP----- 293

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
               G T+  +A G  H+VA+ S G V  WG    G+LG     D   P  V+       
Sbjct: 294 ----GTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTPVDVN------- 342

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH 343
           LPP+  I+A       TA  G   +   L + G                           
Sbjct: 343 LPPDTTITA------ITAHDGSHSL--ALTSTG--------------------------- 367

Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
                 + ++WG    GELG G    +S+  P  V++  G  V ++  G  HS+ + 
Sbjct: 368 ------TILAWGLNSSGELGDGTTTNRST--PVDVNLPPGTTVTAIDNGDDHSMALT 416



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 126/324 (38%), Gaps = 68/324 (20%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
              TWG N+ GQLG G  I    P  V   +   I       +++  +T  G  LA+G N
Sbjct: 55  TVLTWGENDFGQLGDGTTIDSSTPVDVDLPAGTTITAIAGSDANSFALTSTGAVLAWGNN 114

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             G+LG G+  +   P  V+    + VTA A G   T+ L+S    ++L  G   +G+LG
Sbjct: 115 TGGELGDGTNTDRTTPVAVKLPTGTTVTAIAVGTFHTLALTST--GALLAWGGNGFGELG 172

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
            GT    N               P  +   AG TI  +A G  H++A+ S G V  WG  
Sbjct: 173 DGTTTARN--------------EPVPVNVPAGTTITAIAGGRGHSLALTSTGTVLAWGKN 218

Query: 257 GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNG 316
             G+LG     +   P  VD       LPP   ++A        AGGG            
Sbjct: 219 NEGQLGDGTNANSTTPVDVD-------LPPGTTVTA-------IAGGGS----------- 253

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
                                  N      A  + ++WG    G++G G    +S+  P 
Sbjct: 254 -----------------------NSFALTSA-GTVLAWGLNSSGQVGDGTTTDRST--PV 287

Query: 377 KVDILEGMHVISVACGYGHSLVIV 400
            VD+  G  V ++A G GHS+ + 
Sbjct: 288 DVDLPPGTTVTAIAGGEGHSVALT 311



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 57/215 (26%), Positives = 86/215 (40%), Gaps = 18/215 (8%)

Query: 34  GRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG 93
           G+     + N  +P  +    G  +  +A G    +  A+   G    WG N  GQ+G G
Sbjct: 221 GQLGDGTNANSTTPVDVDLPPGTTVTAIAGG--GSNSFALTSAGTVLAWGLNSSGQVGDG 278

Query: 94  DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEP 153
               R  P  V       +     G  H+V +T  G  LA+G N  GQLG G+  +   P
Sbjct: 279 TTTDRSTPVDVDLPPGTTVTAIAGGEGHSVALTSAGTVLAWGLNSSGQLGDGTTTDSTTP 338

Query: 154 SPVRCLVSEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
             V  L  + T TA  A D +  L+     +IL  GL   G+LG GT    +T       
Sbjct: 339 VDVN-LPPDTTITAITAHDGSHSLALTSTGTILAWGLNSSGELGDGTTTNRST------- 390

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
                  P  +    G T+  +  G +H++A+ + 
Sbjct: 391 -------PVDVNLPPGTTVTAIDNGDDHSMALTAP 418


>gi|349605413|gb|AEQ00660.1| putative E3 ubiquitin-protein ligase HERC4-like protein, partial
           [Equus caballus]
          Length = 911

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 98/206 (47%), Gaps = 21/206 (10%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGR 119
           V   C   H +A+      + WG+N+ GQLG G D  ++  P ++  L      +  AG 
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGG 60

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSS 178
           +H+ V+T  G    +G NK GQLG     +   P+ ++ L ++ +    CG D T  L+ 
Sbjct: 61  AHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTK 120

Query: 179 VEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
             G     AG   YGQLGH  T +E N               PR +  L G  + ++ACG
Sbjct: 121 EGGVFTFGAG--GYGQLGHNSTSHEIN---------------PRKVFELMGSIVTQIACG 163

Query: 238 TNHTVA-VDSKGYVYTWGFGGYGRLG 262
             HT A V S G +Y++G GG G+LG
Sbjct: 164 RQHTSAFVPSSGRIYSFGLGGNGQLG 189



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 76/155 (49%), Gaps = 4/155 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L+G+    VAAG    H   + + G  + WGRN+ GQLG  D+  R  P ++ 
Sbjct: 41  SPQLIKSLLGIPFMQVAAG--GAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLK 98

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   KI     G  HT  +T++G    FG   +GQLG  S  +EI P  V  L+ S VT
Sbjct: 99  SLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSIVT 158

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
             ACG   T       G  I + GL   GQLG G+
Sbjct: 159 QIACGRQHTSAFVPSSG-RIYSFGLGGNGQLGTGS 192



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 22/166 (13%)

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--VSEVTATACGA 170
           +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +  +   A GA
Sbjct: 2   QVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLIKSLLGIPFMQVAAGGA 61

Query: 171 -DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             F + LS     +I   G  ++GQLG   +N+              +  P  + +L  +
Sbjct: 62  HSFVLTLS----GAIFGWGRNKFGQLGLNDEND--------------RYFPNLLKSLRTQ 103

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 104 KIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 149



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 14/177 (7%)

Query: 232 VKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVI 290
           V+VACG  H++A+     V+ WG   YG+LG   + K +  P+ +    ++ +  P   +
Sbjct: 1   VQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDYKKQASPQLI----KSLLGIPFMQV 56

Query: 291 SAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH- 343
           +AG  +S      G ++ WG+ K      N+ +D  +P  L  L    +  +  G  H  
Sbjct: 57  AAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTA 116

Query: 344 FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  +    ++G   YG+LG+     + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 117 ALTKEGGVFTFGAGGYGQLGHNSTSHEIN--PRKVFELMGSIVTQIACGRQHTSAFV 171



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L+ L    I ++  G    H  A+  EG  +T+G    GQLGH        P  V E
Sbjct: 94  PNLLKSLRTQKIVYICCG--EDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFE 151

Query: 107 LSKYKIKKAGAGRSHT-VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           L    + +   GR HT   V   G   +FG   +GQLG+GS  N   P  V+
Sbjct: 152 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 203


>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
          Length = 546

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G +              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIE-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E + +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 74/215 (34%), Gaps = 66/215 (30%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++                    
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVA-------------------- 80

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQK 370
                           L   N+  +  G  H     D   + +WG    G+LG     ++
Sbjct: 81  ----------------LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG-SEE 123

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 39.7 bits (91), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D   V
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTV 55


>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
          Length = 1078

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 165/386 (42%), Gaps = 48/386 (12%)

Query: 30  WDAVGRRKGAL-DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERG 88
           +D +G +  A    ++++P  L   V +D+  +  G    H   V  +G  +TWG +  G
Sbjct: 234 FDGLGSQLQAFCKTDVLTPKPLESDVVLDVHQIGPG--DRHIALVTRQGEVFTWGEDSGG 291

Query: 89  QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ--LGSGS 146
           +LGHG +    RP +V  L+   +     G  H+  V+  G+   +G   HG   LG G+
Sbjct: 292 RLGHGFEKDFGRPHLVESLAITNVTFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGT 351

Query: 147 IRNEIEPSPVRCLVS--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNE 202
             +   P  V   +   +V A ACG     W S++  ++  +   G  ++G LGHG    
Sbjct: 352 DVSYWIPKRVSGPLEGLQVVAVACG----TWHSALATSNGKLFTFGDGRFGVLGHG---- 403

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV----------DSKGYVYT 252
                +   +AY     P+ +  L+G   +KVACG  H+ A+           S   ++T
Sbjct: 404 -----NRASVAY-----PKEVQLLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFT 453

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM---- 308
           WG G   RLGH  ++    P  V      N      V    ++  + TA G    M    
Sbjct: 454 WGDGDQYRLGHANKETYLEPTCVAAVAEYNF---HQVACGYTMTVALTASGHVFSMGGTT 510

Query: 309 WGKLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGP 366
           +G+L N   D   P  + D L G  +  +  G  H   + + S   +WG    G LG+G 
Sbjct: 511 YGQLGNPNSDGKVPILVRDKLVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGD 570

Query: 367 YGQKSSAMPKKVDILEGMHVISVACG 392
              K S  P  V+ L+  HV +++CG
Sbjct: 571 TDDKKS--PTLVEALKDRHVKNISCG 594



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 113/265 (42%), Gaps = 34/265 (12%)

Query: 47  PTRLR-PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P R+  PL G+ +  VA  C + H       G+ +T+G    G LGHG++     P  V 
Sbjct: 358 PKRVSGPLEGLQV--VAVACGTWHSALATSNGKLFTFGDGRFGVLGHGNRASVAYPKEVQ 415

Query: 106 ELSKYKIKKAGAGRSHTVVV--------TEDGNSLAFGWNKHGQ--LGSGSIRNEIEPSP 155
            LS YK  K   G  H+  +        ++      F W    Q  LG  +    +EP+ 
Sbjct: 416 LLSGYKAIKVACGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTC 475

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           V  +        ACG   TV L++     + + G   YGQLG+         D  V +  
Sbjct: 476 VAAVAEYNFHQVACGYTMTVALTA--SGHVFSMGGTTYGQLGNPNS------DGKVPILV 527

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
             +        L GE + +++CG NH   + S+  +YTWG G  GRLGH +  D+  P  
Sbjct: 528 RDK--------LVGEFVEEISCGANHVAVLTSRSELYTWGRGANGRLGHGDTDDKKSPTL 579

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSC 299
           V+  +  +V      IS GS  +SC
Sbjct: 580 VEALKDRHV----KNISCGSTFTSC 600



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 87/192 (45%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++  G  H   V  +G V+TWG    GRLGH  +KD   P  V+   
Sbjct: 252 PKPLESDVVLDVHQIGPGDRHIALVTRQGEVFTWGEDSGGRLGHGFEKDFGRPHLVESLA 311

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDDWMY--PKPLM-DLSG 330
             NV      ++ G  +S   +  G L+ WG       L  +G D  Y  PK +   L G
Sbjct: 312 ITNV----TFVACGEYHSCAVSTSGDLFTWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEG 367

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H     ++    ++G  ++G LG+G   + S A PK+V +L G   I V
Sbjct: 368 LQVVAVACGTWHSALATSNGKLFTFGDGRFGVLGHG--NRASVAYPKEVQLLSGYKAIKV 425

Query: 390 ACGYGHSLVIVD 401
           ACG  HS  I+D
Sbjct: 426 ACGVWHSAAIID 437


>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
          Length = 425

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 160/376 (42%), Gaps = 45/376 (11%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           RP    D    +  C   H + +   GR +  G N+ GQLG G  +      I       
Sbjct: 66  RPGDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDE 125

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP--VRCLV-SEVTATA 167
           K+ +  AG  H+  VT DG   A+G N  GQLG G    ++  +P  V CL  + V   A
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVKMVA 185

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALA 227
            G++ ++  ++ E   +L+ G    G+LGHG    + T      +   ++  PR I  L 
Sbjct: 186 LGSEHSI--ATTEEGEVLSWGAAGAGRLGHG----HKTSILGFSIT-TSEYTPRLIKNLD 238

Query: 228 GETIVKVACGTNHTVAVDSKGYVYTWGF---GGYGRLGHREQKDEWVPRRVDVFQRNNVL 284
           G  I ++A G  H+  +D KG ++ +G     G+GR G     DE  P  V+       +
Sbjct: 239 GVKIKRIAAGMLHSACIDEKGTLFIFGQKTEKGFGRSG-----DELRPTVVE------EV 287

Query: 285 PPEAVISAGSVNSSCTAGGGQLYMWGKLKN-----NGDDW----------MYPKPLMDLS 329
           P    ++ G  ++      G LY WG  +N      G D           ++  P+  +S
Sbjct: 288 PFSEEVACGGYHTCVVTDSGDLYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFPVSKVS 347

Query: 330 -GWNLRCMDSGNMHH---FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            GW    + SG   +   + GA+ +    GH+  G+LG+G         P  V+  +   
Sbjct: 348 CGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHG--NDVDYFEPMMVEFGKNAR 405

Query: 386 VISVACGYGHSLVIVD 401
            + V+CG+ H+  I +
Sbjct: 406 AVHVSCGFNHTGAIFE 421



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 139/342 (40%), Gaps = 46/342 (13%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSEL--------SKYKIKKAGAGRSHTVVVTEDGNSLA 133
           WG  + G+LG G    R  PT                       G +HT+ +TE G   A
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 134 FGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQY 192
            G N  GQLG G S+ + +EP  V     +V   + G   +  +++     +   G    
Sbjct: 97  AGLNDFGQLGIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTA--DGKLFAWGRNSS 154

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           GQLG G            K A +    PR +  LA   +  VA G+ H++A   +G V +
Sbjct: 155 GQLGLG------------KRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEVLS 202

Query: 253 WGFGGYGRLGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           WG  G GRLGH  +           E+ PR +       +      I+AG ++S+C    
Sbjct: 203 WGAAGAGRLGHGHKTSILGFSITTSEYTPRLIKNLDGVKI----KRIAAGMLHSACIDEK 258

Query: 304 GQLYMWGKLKNNG----DDWMYPKPLMDLS-GWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
           G L+++G+    G     D + P  + ++     + C   G  H  V  DS  + SWG  
Sbjct: 259 GTLFIFGQKTEKGFGRSGDELRPTVVEEVPFSEEVAC---GGYHTCVVTDSGDLYSWGSN 315

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           + G LG G      S    K  + +   V  V+CG+ H+ VI
Sbjct: 316 ENGCLGLGGTDMVRSPEVLKSSLFK-FPVSKVSCGWKHTAVI 356



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 71/165 (43%), Gaps = 13/165 (7%)

Query: 253 WGFGGYGRLGHREQKDEWVPRRVDVFQRNN----VLPPEAVISAGSVNSSCTAGGGQLYM 308
           WG G YGRLG    +  W P     F           P A ++ G  ++      G+++ 
Sbjct: 37  WGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLACGGAHTLFLTESGRVFA 96

Query: 309 -----WGKLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHH-FVGADSSCISWGHAQYG 360
                +G+L   G    +    +++SG++ + ++  +GN H   V AD    +WG    G
Sbjct: 97  AGLNDFGQL-GIGSSVTHSLEPIEVSGFDEKVVEVSAGNHHSCAVTADGKLFAWGRNSSG 155

Query: 361 ELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           +LG G    K  + P+KVD L    V  VA G  HS+   +   V
Sbjct: 156 QLGLGKRAGKVVSTPRKVDCLADARVKMVALGSEHSIATTEEGEV 200



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 102/262 (38%), Gaps = 48/262 (18%)

Query: 175 WLSSVEGASILNAGLP--------------QYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           W S    A +L++G P               YG+LG G      ++ S     +    RP
Sbjct: 11  WRSQRRAARMLSSGEPAAGRRRVAALWGNGDYGRLGMGA---LESRWSPTACPFFLTGRP 67

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV-PRRVDVFQ 279
                   +    +ACG  HT+ +   G V+  G   +G+LG        + P  V  F 
Sbjct: 68  ---GDDDDDPPASLACGGAHTLFLTESGRVFAAGLNDFGQLGIGSSVTHSLEPIEVSGFD 124

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL--------KNNGDDWMYPKPLMDLSGW 331
              V      +SAG+ +S      G+L+ WG+         K  G     P+ +  L+  
Sbjct: 125 EKVV-----EVSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADA 179

Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAM----------PKKVDI 380
            ++ +  G+ H     +    +SWG A  G LG   +G K+S +          P+ +  
Sbjct: 180 RVKMVALGSEHSIATTEEGEVLSWGAAGAGRLG---HGHKTSILGFSITTSEYTPRLIKN 236

Query: 381 LEGMHVISVACGYGHSLVIVDR 402
           L+G+ +  +A G  HS  I ++
Sbjct: 237 LDGVKIKRIAAGMLHSACIDEK 258


>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
           distachyon]
          Length = 1092

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 154/376 (40%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG       P ++  
Sbjct: 304 PKPLEFAVRLDVQNIS--CGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDA 361

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           L+   I+    G  HT  VT  G+   +  G  K G LG G+  +   P  +   +    
Sbjct: 362 LTHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPLEGIH 421

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V++ +CG   TV ++S     +   G   +G LGHG                E+   P+ 
Sbjct: 422 VSSISCGPFHTVIVTS--AGQLFTFGDGSFGVLGHGD--------------RESLSVPKE 465

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH +++   
Sbjct: 466 VESLKGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRL 525

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    ++ G   +      G +Y     ++G+L N   D M P  +
Sbjct: 526 VPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLPARV 581

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G    K++  P  V+ L+ 
Sbjct: 582 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHGNTDDKNT--PTLVEALKD 639

Query: 384 MHVISVACGYGHSLVI 399
             V +V CG   +  I
Sbjct: 640 KQVRNVVCGTNFTAAI 655



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 18/194 (9%)

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+P   A      +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D 
Sbjct: 304 PKPLEFAVRL--DVQNISCGGKHAALVSKQGEIYSWGEESGGRLGHGVDCDVAHPKLIDA 361

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
               N+     +++ G  ++      G LY WG       L  +G+D   W+  K    L
Sbjct: 362 LTHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHGPL 417

Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G ++  +  G  H   V +     ++G   +G LG+G   ++S ++PK+V+ L+G+  +
Sbjct: 418 EGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHG--DRESLSVPKEVESLKGLRTV 475

Query: 388 SVACGYGHSLVIVD 401
             ACG  H+  +V+
Sbjct: 476 RAACGVWHTAAVVE 489



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 93/218 (42%), Gaps = 37/218 (16%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV------------DVEGRCYTWGRNERGQL 90
           +L  P  +  L G  +R V A C   H  AV               G+ +TWG  ++G+L
Sbjct: 459 SLSVPKEVESLKG--LRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRL 516

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS----GS 146
           GHGDK  R  PT V+ L +    +   G   TV +T  G+    G   +GQLG+    G 
Sbjct: 517 GHGDKESRLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGM 576

Query: 147 IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTK 206
           +   +E    +  V E++   CGA     L+S     +   G    G+LGHG  ++ NT 
Sbjct: 577 LPARVEGKLHKNFVEEIS---CGAYHVAVLTS--RTEVYTWGKGANGRLGHGNTDDKNT- 630

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
                        P  + AL  + +  V CGTN T A+
Sbjct: 631 -------------PTLVEALKDKQVRNVVCGTNFTAAI 655


>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
            rerio]
          Length = 4846

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 131/288 (45%), Gaps = 40/288 (13%)

Query: 69   HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
            H +A+   G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT D
Sbjct: 4078 HSMALTESGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSD 4137

Query: 129  GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNA 187
            G   +FG   +G+LG G+  N+  P  V  L   +V   ACG + T+ +S+ +G ++   
Sbjct: 4138 GKLFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQVGQVACGLNHTLAVSA-DGMTVWAF 4196

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            G   YG+LG G                 A+  P+ +  L G  I KVACGT  +VA+   
Sbjct: 4197 GDGDYGKLGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 4242

Query: 248  GYVYTWGFG-------GYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
            G VYT+G         G  R  +R Q+   VP    VF  +        ++ G+ ++   
Sbjct: 4243 GNVYTFGQDRLIGLPEGRARNHNRPQQ---VPALTGVFIED--------VAVGAEHTLTL 4291

Query: 301  AGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            +  G +Y WG          + +    P  +  L G N++ + +G  H
Sbjct: 4292 SSTGDVYAWGSNSEGQLGLGHTNHVREPTLISALQGKNIQQISAGRCH 4339



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 86/334 (25%), Positives = 140/334 (41%), Gaps = 73/334 (21%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  + WG    GQL    +     PT+    S+   ++   G++ T V+  +G   A 
Sbjct: 3980 GKCDVFLWGAGRHGQLAEAGR-NILVPTLAPSFSQ--AQQVVCGQNCTFVIQANGTVSAC 4036

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4037 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQMVTSCGSDGHS-MALTESGEVFSWGDGD 4095

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4096 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4141

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            ++G G YGRLG     ++ +P RV   + + V      ++ G +N +       + +W  
Sbjct: 4142 SFGNGDYGRLGLGNTSNKKLPERVSALEGHQV----GQVACG-LNHTLAVSADGMTVW-- 4194

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                                     ++G   YG+LG G    KS
Sbjct: 4195 -----------------------------------------AFGDGDYGKLGLGNSTAKS 4213

Query: 372  SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
            S  P+KVD+L G+ +  VACG   S+ +    NV
Sbjct: 4214 S--PQKVDVLCGIGIKKVACGTQFSVALTKDGNV 4245



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 135/323 (41%), Gaps = 33/323 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  V+E
Sbjct: 464 HTLAFTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSE 523

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 524 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 581

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ + AL G  I KV  G+  ++A+ S 
Sbjct: 582 GGGDNGKLGHGDTNRVY--------------KPKVVEALQGMFIRKVCAGSQSSLALTST 627

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G     G  E      P+ ++      V+     IS G  +    +   ++Y
Sbjct: 628 GQVYAWGCGACLGCGSSE-ATALRPKLIEELATTRVVD----ISIGDSHCLALSHDNEVY 682

Query: 308 MWGKLK-------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF----VGADSSCISWGH 356
            WG          N+      PK ++ L G  ++ + +G  H      +  D   ++W  
Sbjct: 683 AWGNNSMGQCGQGNSTGPITKPKKVIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHR 742

Query: 357 AQYGELGYGPYGQKSSAMPKKVD 379
               +L    +    S + +  D
Sbjct: 743 PYCVDLEESTFSHLRSFLERYCD 765



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 150/377 (39%), Gaps = 79/377 (20%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           Y WG N   QL  G + +  +P +    S  +  +AG  +  T V++ DG+  A G   +
Sbjct: 370 YVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAG--QYCTFVISSDGSVRACGKGSY 427

Query: 140 GQLGSGSIRNE-----IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
           G+LG G   N+     +   P R +  +  +++ G+D      + EG  + + G   YG+
Sbjct: 428 GRLGLGDSNNQSTLKKLTFEPHRAI--KKVSSSKGSDGHTLAFTSEG-EVFSWGDGDYGK 484

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIA-ALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           LGHG  +               Q  P+ I   L G+ +V V+ G  H+ AV   G +YTW
Sbjct: 485 LGHGNSS--------------TQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTW 530

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQR--------------------------------- 280
           G G +GRLGH +     +P  V                                      
Sbjct: 531 GEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLG 590

Query: 281 ----NNVLPPEAV----------ISAGSVNSSCTAGGGQLYMWG-----KLKNNGDDWMY 321
               N V  P+ V          + AGS +S      GQ+Y WG        ++    + 
Sbjct: 591 HGDTNRVYKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLGCGSSEATALR 650

Query: 322 PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
           PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G         PKKV  
Sbjct: 651 PKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG-NSTGPITKPKKVIG 709

Query: 381 LEGMHVISVACGYGHSL 397
           L+G+ +  ++ G  HSL
Sbjct: 710 LDGVAIQQISAGTSHSL 726



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 502 PLQGKVVVCVSAGYR--HSAAVSEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 557

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  V  L        C G
Sbjct: 558 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAG 617

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 618 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELATT 660

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            +V ++ G +H +A+     VY WG    G+ G 
Sbjct: 661 RVVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 694



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 123/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 362 MVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISSDG-S 418

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 419 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRAIKKVSSSKG--------SDGHTLA 467

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             S+G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+  +  
Sbjct: 468 FTSEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVSED 524

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 525 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 584

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK V+ L+GM +  V  G   SL +     V
Sbjct: 585 DNGKLGHGDTNRVYK--PKVVEALQGMFIRKVCAGSQSSLALTSTGQV 630



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H + +   G  Y WG N  GQLG G       PT++S 
Sbjct: 4267 PQQVPALTGVFIEDVAVGAE--HTLTLSSTGDVYAWGSNSEGQLGLGHTNHVREPTLISA 4324

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 4325 LQGKNIQQISAGRCHSAAWT 4344



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 575 GRTVWSFGGGDNGKLGHGDTNRVYKPKVVEALQGMFIRKVCAGSQSS--LALTSTGQVYA 632

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  ++     G SH + ++ D    A+G N  G
Sbjct: 633 WGCG--ACLGCGSSEATALRPKLIEELATTRVVDISIGDSHCLALSHDNEVYAWGNNSMG 690

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 691 QCGQGN 696


>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
          Length = 992

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 115/235 (48%), Gaps = 24/235 (10%)

Query: 48  TRLRPLVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVS 105
           T   PL G++ R  +   C   H +A+  +G+ + WG N  GQLG   ++     P  + 
Sbjct: 107 TECSPLKGLENRQVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRKEQAGTQSPRHLQ 166

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW--NKHGQLGSGSIRNEIEPSPVRCLV-SE 162
            L    + +  AG +H+ V++  G  + FGW  N  GQLG G   +   P+ V  L   +
Sbjct: 167 SLCGIPVAQISAGGNHSFVLSLSG--VVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK 224

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           + + +CG + T  L+  +G ++   G   +GQLGH               +++ +  PR 
Sbjct: 225 IVSISCGGEHTAALA--KGGTVFTFGSGGFGQLGHN--------------SFKDEHHPRL 268

Query: 223 IAALAGETIVKVACGTNHT-VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           +A L G  + +V CG NHT V+  S   +Y++G G  G+LG+ EQ  + VP  VD
Sbjct: 269 VAELWGSKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLPVD 323



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/262 (28%), Positives = 107/262 (40%), Gaps = 34/262 (12%)

Query: 20  GELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRC 79
           G+L   G      +G RK        SP  L+ L G+ +  ++AG    H   + + G  
Sbjct: 137 GQLFVWGENALGQLGLRKE--QAGTQSPRHLQSLCGIPVAQISAG--GNHSFVLSLSGVV 192

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG N  GQLG GD   R  PT+V+ L + KI     G  HT  + + G    FG    
Sbjct: 193 FGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKKIVSISCGGEHTAALAKGGTVFTFGSGGF 252

Query: 140 GQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG  S ++E  P  V  L  S+V+   CG + T+ +S+     I + G    GQLG+G
Sbjct: 253 GQLGHNSFKDEHHPRLVAELWGSKVSQVTCGRNHTL-VSTASPKLIYSFGCGMQGQLGNG 311

Query: 199 TD------------NEYNTKDSSVKLAY---------------EAQPRP-RAIAALAGET 230
                          EYN + +  KL                 EA P P R I       
Sbjct: 312 EQVKQSVPLPVDQPTEYNDEYTIQKLVAGENHSFALYFKELGNEANPDPTRGIMTFDNGM 371

Query: 231 IVKVACGTNHTVAVDSKGYVYT 252
           I +  CG +   A+     V++
Sbjct: 372 IEQCECGKDPRKAIKDLKKVFS 393



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 44/164 (26%), Positives = 80/164 (48%), Gaps = 12/164 (7%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           PR + +L G  + +++ G NH+  +   G V+ WG    G+LG  +  D +VP  V+  +
Sbjct: 162 PRHLQSLCGIPVAQISAGGNHSFVLSLSGVVFGWGGNSAGQLGLGDTTDRFVPTVVNSLK 221

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDLSGWNL 333
           R  ++     IS G  +++  A GG ++      +G+L  N+  D  +P+ + +L G  +
Sbjct: 222 RKKIVS----ISCGGEHTAALAKGGTVFTFGSGGFGQLGHNSFKDEHHPRLVAELWGSKV 277

Query: 334 RCMDSGNMHHFVGADSSCI--SWGHAQYGELGYGPYGQKSSAMP 375
             +  G  H  V   S  +  S+G    G+LG G   ++S  +P
Sbjct: 278 SQVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSVPLP 321


>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           2 [Equus caballus]
          Length = 1057

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D             Y
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGID-------------Y 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D + P  
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V  DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGIDYKKQASPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D  +P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158


>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
          Length = 1103

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 159/378 (42%), Gaps = 51/378 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L  +V +D++ +A  C + H   V  +G  ++WG    G+LGHG       P ++  
Sbjct: 299 PKALESVVVLDVQNIA--CGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDA 356

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLV 160
           LS   I+    G  HT  VT  G+   +G   +  G LG G   +   P     P++ L 
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL- 415

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             +++ +CG   T  ++S     +   G   +G LGHG  +  +               P
Sbjct: 416 -HISSISCGPWHTALVTS--AGKLFTFGDGTFGVLGHGDRDSISI--------------P 458

Query: 221 RAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKD 268
           R + +L G   V+ ACG  HT AV            +S G ++TWG G  GRLGH +++ 
Sbjct: 459 REVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEA 518

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPK 323
             VP  V       V P    ++ G   +      G +Y     ++G+L N   D   P 
Sbjct: 519 RLVPTCVAAL----VEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPA 574

Query: 324 PLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
            +   LS   +  +  G  H   + + +   +WG    G LG+G    +++  P  V+ L
Sbjct: 575 RVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNT--PTLVEAL 632

Query: 382 EGMHVISVACGYGHSLVI 399
           +   V S+ACG   +  I
Sbjct: 633 KDKQVKSIACGTNFTAAI 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+A+ ++    +  +ACG  H   V  +G V++WG    GRLGH    D   P+ +D   
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG       L  +G D   W+  +    L G
Sbjct: 359 NLNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   V +     ++G   +G LG+G   + S ++P++V+ L+G+  +  
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG--DRDSISIPREVESLKGLRTVRA 472

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 473 ACGVWHTAAVVE 484



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 33/328 (10%)

Query: 95  KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           KI    P  +  +    ++    G  H  +VT+ G   ++G    G+LG G   +   P 
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            +  L +  +   ACG   T  ++          G    G LGHG D  +          
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWV-------- 404

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
               P+ R    L G  I  ++CG  HT  V S G ++T+G G +G LGH ++    +PR
Sbjct: 405 ----PK-RVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPR 459

Query: 274 RVDVFQ-RNNVLPPEAVISAGSV-------NSSCTAGGGQLYMWGKLKN----NGDD--W 319
            V+  +    V     V    +V        +S     G+L+ WG        +GD    
Sbjct: 460 EVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEAR 519

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKV 378
           + P  +  L   N   +  G+       +S  I + G   YG+LG  P  Q    +P +V
Sbjct: 520 LVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NP--QADGKLPARV 576

Query: 379 D-ILEGMHVISVACGYGHSLVIVDRTNV 405
           +  L    V  +ACG  H  V+  RT V
Sbjct: 577 EGKLSKSFVEELACGAYHVAVLTSRTEV 604


>gi|297832882|ref|XP_002884323.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
 gi|297330163|gb|EFH60582.1| regulator of chromosome condensation family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 393

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 147/333 (44%), Gaps = 38/333 (11%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   +++   +V  L  Y ++   +G  +++ + +DG    +GWN+ G 
Sbjct: 10  WGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVW--LSSVEGASILNAGLPQYGQLGH 197
           LG     + E  PS V+ L + ++T  A G     W  L+  +       G  +YGQ G 
Sbjct: 70  LGHPPETKTENIPSRVKALANVKITQAAIGG----WHCLAVDDQGRAYAWGGNEYGQCG- 124

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
               E   KD   +        P+  A     T+ +VA G  H+V +  +G+V+TWG   
Sbjct: 125 ----EEPLKDEMGRPVRRDIVIPKRCAPKL--TVRQVAAGGTHSVVLTREGHVWTWG--- 175

Query: 258 YGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
                       W P   +++ V  R   L   ++I+ G+ ++      G+L  WG  + 
Sbjct: 176 ----------QPWPPGDIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEY 225

Query: 314 ---NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPY 367
                GD     +P P+  L    L  + +G  H     D   +  WG  ++G LG+G  
Sbjct: 226 GQLGTGDTQPTSHPVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDN 285

Query: 368 GQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            + S  +P+KV++L    +I V+CG  HS+ + 
Sbjct: 286 DKSSKMVPQKVNLLAEEDIIQVSCGGTHSVALT 318



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 130/274 (47%), Gaps = 36/274 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
           P+R++ L  V I   A G    HC+AVD +GR Y WG NE GQ G        G  ++RD
Sbjct: 82  PSRVKALANVKITQAAIG--GWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMGRPVRRD 139

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                    K  +++  AG +H+VV+T +G+   +G         G I+    P  V+ L
Sbjct: 140 IVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWG----QPWPPGDIKQIFVPVRVQGL 195

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
              V+  A GA   + L   E   +L  G  +YGQLG G     +T+ +S          
Sbjct: 196 -ENVSIIAVGAFHNLALE--EDGRLLAWGNNEYGQLGTG-----DTQPTS---------H 238

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH--REQKDEWVPRRVDV 277
           P  +  L   T+V +A G  H+ A+  KG VY WG G +GRLG    ++  + VP++V++
Sbjct: 239 PVPVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNL 298

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
               +++     +S G  +S      G+++ +G+
Sbjct: 299 LAEEDIIQ----VSCGGTHSVALTRDGRIFSFGR 328



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 163/378 (43%), Gaps = 64/378 (16%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAG 116
           +R V +G  S + +A+  +G  +TWG N+RG LGH  + + +  P+ V  L+  KI +A 
Sbjct: 40  VRSVVSG--SRNSLAICDDGTMFTWGWNQRGTLGHPPETKTENIPSRVKALANVKITQAA 97

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWL 176
            G  H + V + G + A+G N++GQ G   +++E+   PVR  +  V    C    TV  
Sbjct: 98  IGGWHCLAVDDQGRAYAWGGNEYGQCGEEPLKDEMG-RPVRRDI--VIPKRCAPKLTV-- 152

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR--------PRAIAALAG 228
                   + AG         GT +   T++  V    +  P         P  +  L  
Sbjct: 153 ------RQVAAG---------GTHSVVLTREGHVWTWGQPWPPGDIKQIFVPVRVQGL-- 195

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           E +  +A G  H +A++  G +  WG   YG+LG  + +    P  V       ++    
Sbjct: 196 ENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPVPVHGLDDLTLVD--- 252

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGN 340
            I+AG  +S+     G++Y WG+ +        N+    M P+ +  L+  ++  +  G 
Sbjct: 253 -IAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLAEEDIIQVSCGG 311

Query: 341 MHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL---------------EGM 384
            H   +  D    S+G   +G LGYG   + ++  P ++ I+               EG 
Sbjct: 312 THSVALTRDGRIFSFGRGDHGRLGYGR--KVTTGQPLELPIMIPPPEGSFNHADEEEEGK 369

Query: 385 HVIS-VACGYGHSLVIVD 401
                +ACG  H+L IV+
Sbjct: 370 WSAKWIACGGRHTLAIVE 387



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 69/270 (25%), Positives = 107/270 (39%), Gaps = 45/270 (16%)

Query: 179 VEGASILNAGLPQYGQLGHGTDNE------------YNTK-------------DSSVKLA 213
           V   SI+  G  + GQLG GT+ E            Y+ +             D      
Sbjct: 2   VSATSIIAWGSGEDGQLGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFT 61

Query: 214 YEAQPR--------------PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
           +    R              P  + ALA   I + A G  H +AVD +G  Y WG   YG
Sbjct: 62  WGWNQRGTLGHPPETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAYAWGGNEYG 121

Query: 260 RLGHREQKDEW-VPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMWGKLKNNG 316
           + G    KDE   P R D+       P   V  ++AG  +S      G ++ WG+    G
Sbjct: 122 QCGEEPLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTREGHVWTWGQPWPPG 181

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
           D      P+      N+  +  G  H+  +  D   ++WG+ +YG+LG G    + ++ P
Sbjct: 182 DIKQIFVPVRVQGLENVSIIAVGAFHNLALEEDGRLLAWGNNEYGQLGTG--DTQPTSHP 239

Query: 376 KKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             V  L+ + ++ +A G  HS  + D+  V
Sbjct: 240 VPVHGLDDLTLVDIAAGGWHSTALTDKGEV 269



 Score = 68.9 bits (167), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 17/210 (8%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +  P R++ L  V I  V A     H +A++ +GR   WG NE GQLG GD      P 
Sbjct: 185 QIFVPVRVQGLENVSIIAVGA----FHNLALEEDGRLLAWGNNEYGQLGTGDTQPTSHPV 240

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG--SIRNEIEPSPVRCLV 160
            V  L    +    AG  H+  +T+ G    +G  +HG+LG G     +++ P  V  L 
Sbjct: 241 PVHGLDDLTLVDIAAGGWHSTALTDKGEVYGWGRGEHGRLGFGDNDKSSKMVPQKVNLLA 300

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            E +   +CG   +V L+      I + G   +G+LG+G      T    ++L     P 
Sbjct: 301 EEDIIQVSCGGTHSVALT--RDGRIFSFGRGDHGRLGYG---RKVTTGQPLELPIMIPPP 355

Query: 220 PRAIAALAGETIVK-----VACGTNHTVAV 244
             +      E   K     +ACG  HT+A+
Sbjct: 356 EGSFNHADEEEEGKWSAKWIACGGRHTLAI 385


>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Callithrix jacchus]
          Length = 979

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ +    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------CK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
 gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
          Length = 1229

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 78/268 (29%), Positives = 124/268 (46%), Gaps = 17/268 (6%)

Query: 44   LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
            L SP  L     +++ +VA G    H  A+   G  Y WG ++ GQLG GD  +   P +
Sbjct: 865  LPSPISLLNCFKLEVLYVACG--KNHTTALTNNG-VYAWGCSKYGQLGLGDVYESPYPRL 921

Query: 104  VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
            ++ L+   +     G+ HT+ +TE G   A+GW  HGQLG G+I ++  P  V  L  +V
Sbjct: 922  ITSLANENVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQRLPVCVNHLKDQV 981

Query: 164  TA-TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
                A G   ++ LS  +   I + G   +GQLG G     NT  SSV +    Q     
Sbjct: 982  IKDIAAGHGHSLVLS--DKGQIFSFGSGVFGQLGTG-----NTTKSSVPVL--IQGISEK 1032

Query: 223  IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
            I  +A      ++CG +H+  +   G VYTWG    G+LG+   K+   P +++     N
Sbjct: 1033 IILIATGYFHSISCGCHHSALLTVSGGVYTWGRSLDGQLGNGGHKEVTAPTQIN----EN 1088

Query: 283  VLPPEAVISAGSVNSSCTAGGGQLYMWG 310
                + +       ++     G+++ WG
Sbjct: 1089 TFKADCISCGCEFTAAQEKQTGKIFCWG 1116



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 74/192 (38%), Gaps = 54/192 (28%)

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
           ++  + P P ++       ++ VACG NHT A+ + G VY WG   YG+L          
Sbjct: 860 MSRHSLPSPISLLNCFKLEVLYVACGKNHTTALTNNG-VYAWGCSKYGQL---------- 908

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGW 331
                                         G G +Y          +  YP+ +  L+  
Sbjct: 909 ------------------------------GLGDVY----------ESPYPRLITSLANE 928

Query: 332 NLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
           N+  +  G  H     +     +WG   +G+LG G    +   +P  V+ L+   +  +A
Sbjct: 929 NVITLSCGQFHTLALTEKGQVFAWGWGVHGQLGLGNIDDQR--LPVCVNHLKDQVIKDIA 986

Query: 391 CGYGHSLVIVDR 402
            G+GHSLV+ D+
Sbjct: 987 AGHGHSLVLSDK 998


>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Saimiri boliviensis boliviensis]
          Length = 1049

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|296089288|emb|CBI39060.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 45/280 (16%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ V+A     H VAV   G  YTWG    G+LGH +  I   +  +++
Sbjct: 178 PCKVDSLHGTFIKSVSAA--KFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   ++K   A + HTVV TE G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S++ A A     T  +S  E   +   G  + GQLG+GT N  +               
Sbjct: 296 KSKIVAVAAANKHTAVIS--ESGEVFTWGCNKKGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+ +  VA    HT+ + + G ++TW        GHR       PRRV +  
Sbjct: 342 PRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTW--------GHR----LVTPRRVVIVR 389

Query: 278 -FQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMW 309
             ++N   P +         I+AG V+S      G ++ W
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYW 429



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 17/196 (8%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
           Q  P  + +L G  I  V+    H+VAV ++G VYTWGFG  GRLGH E      Q    
Sbjct: 175 QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVI 234

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKP 324
            PR+V +   +  +     I+A   ++     GG+++ WG  +       + D    P+ 
Sbjct: 235 TPRQVTMGLGSRRV---KAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRR 291

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
           +  L    +  + + N H  V ++S    +WG  + G+LGYG     S+  P+ V+ L+G
Sbjct: 292 VSSLKS-KIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKG 350

Query: 384 MHVISVACGYGHSLVI 399
             +  VA    H++V+
Sbjct: 351 KVLKGVAAAKYHTIVL 366



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 27/244 (11%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G+   +  P  V  L    IK   A + H+V V+  G    +
Sbjct: 152 VATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+ + G+LG             I P  V   +      A  A     + + EG  +   G
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWG 271

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + GQLG      Y + D+        QP PR +++L  + IV VA    HT  +   G
Sbjct: 272 SNREGQLG------YTSVDT--------QPIPRRVSSLKSK-IVAVAAANKHTAVISESG 316

Query: 249 YVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            V+TWG    G+LG+        + PR V+ + +  VL     ++A   ++      G++
Sbjct: 317 EVFTWGCNKKGQLGYGTSNSASNYTPRVVE-YLKGKVL---KGVAAAKYHTIVLGADGEI 372

Query: 307 YMWG 310
           + WG
Sbjct: 373 FTWG 376



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 33/295 (11%)

Query: 124 VVTEDGNSLA---FGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
           VV  + +S+A   F W    + QLG+G+   +  P  V  L      +   A F     S
Sbjct: 144 VVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVS 203

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACG 237
             G  +   G  + G+LGH   + ++ + + +         PR +    G   VK +A  
Sbjct: 204 ARG-EVYTWGFGRGGRLGHPEFDIHSGQAAVIT--------PRQVTMGLGSRRVKAIAAA 254

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            +HTV     G V+TWG    G+LG+     + +PRRV   +   V      ++A + ++
Sbjct: 255 KHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-----AVAAANKHT 309

Query: 298 SCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GAD 348
           +  +  G+++ WG  K        +N      P+ +  L G  L+ + +   H  V GAD
Sbjct: 310 AVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGAD 369

Query: 349 SSCISWGH--AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +WGH       +      +K+ + P K    + +HV+S+A G  HS+ + +
Sbjct: 370 GEIFTWGHRLVTPRRVVIVRNLKKNGSTPLKFH--QRLHVVSIAAGMVHSMALTE 422


>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
 gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
           finger domain [Arabidopsis thaliana]
          Length = 1105

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 156/374 (41%), Gaps = 45/374 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   + +D++ +A  C   H V V  +G  ++WG    G+LGHG       P ++  
Sbjct: 303 PKALESTIVLDVQNIA--CGGQHAVLVTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDA 360

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS--EVT 164
           L+   I+    G  H+  VT  G+   +G    G LG G+  +   P  V  L+    V+
Sbjct: 361 LNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVS 420

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
           + ACG   T  ++S     +   G   +G LGHG          SV +       PR + 
Sbjct: 421 SIACGPYHTAVVTS--AGQLFTFGDGTFGVLGHGDRK-------SVFI-------PREVD 464

Query: 225 ALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           +L G   V+ ACG  HT AV             S G ++TWG G   RLGH +++ + VP
Sbjct: 465 SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 524

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM- 326
             V       V P    ++ G   +      G +Y     ++G+L N   D   P  +  
Sbjct: 525 TCVAAL----VEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNPHADGKVPTRVDG 580

Query: 327 DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMH 385
            L    +  +  G  H   + + +   +WG    G LG+G    ++S  P  V+ L+   
Sbjct: 581 KLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRNS--PTLVESLKDKQ 638

Query: 386 VISVACGYGHSLVI 399
           V S+ACG   +  +
Sbjct: 639 VKSIACGSNFTAAV 652



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 66/243 (27%)

Query: 159 LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
           +V +V   ACG    V L + +G S  + G    G+LGHG D+                 
Sbjct: 310 IVLDVQNIACGGQHAV-LVTKQGES-FSWGEESEGRLGHGVDSNVQ-------------- 353

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P+ I AL    I  VACG  H+ AV   G +YTWG G +G LGH  +   WVP+RV+  
Sbjct: 354 HPKLIDALNTTNIELVACGEYHSCAVTLSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFL 413

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDS 338
                +   + I+ G  +++     GQL+                               
Sbjct: 414 MEGIHV---SSIACGPYHTAVVTSAGQLF------------------------------- 439

Query: 339 GNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLV 398
                         ++G   +G LG+G   +KS  +P++VD L+G+  +  ACG  H+  
Sbjct: 440 --------------TFGDGTFGVLGHG--DRKSVFIPREVDSLKGLRTVRAACGVWHTAA 483

Query: 399 IVD 401
           +V+
Sbjct: 484 VVE 486


>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101226798 [Cucumis sativus]
          Length = 1103

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 159/378 (42%), Gaps = 51/378 (13%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L  +V +D++ +A  C + H   V  +G  ++WG    G+LGHG       P ++  
Sbjct: 299 PKALESVVVLDVQNIA--CGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDA 356

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS----PVRCLV 160
           LS   I+    G  HT  VT  G+   +G   +  G LG G   +   P     P++ L 
Sbjct: 357 LSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQGL- 415

Query: 161 SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
             +++ +CG   T  ++S     +   G   +G LGHG  +  +               P
Sbjct: 416 -HISSISCGPWHTALVTS--AGKLFTFGDGTFGVLGHGDRDSISI--------------P 458

Query: 221 RAIAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKD 268
           R + +L G   V+ ACG  HT AV            +S G ++TWG G  GRLGH +++ 
Sbjct: 459 REVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEA 518

Query: 269 EWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPK 323
             VP  V       V P    ++ G   +      G +Y     ++G+L N   D   P 
Sbjct: 519 RLVPTCVAAL----VEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLGNPQADGKLPA 574

Query: 324 PLM-DLSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDIL 381
            +   LS   +  +  G  H   + + +   +WG    G LG+G    +++  P  V+ L
Sbjct: 575 RVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWGKGANGRLGHGSTDDRNT--PTLVEAL 632

Query: 382 EGMHVISVACGYGHSLVI 399
           +   V S+ACG   +  I
Sbjct: 633 KDKQVKSIACGTNFTAAI 650



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 90/192 (46%), Gaps = 16/192 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+A+ ++    +  +ACG  H   V  +G V++WG    GRLGH    D   P+ +D   
Sbjct: 299 PKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPKLIDALS 358

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDLSG 330
             N+     +++ G  ++      G LY WG       L  +G D   W+  +    L G
Sbjct: 359 NLNI----ELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGPLQG 414

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
            ++  +  G  H   V +     ++G   +G LG+G   + S ++P++V+ L+G+  +  
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHG--DRDSISIPREVESLKGLRTVRA 472

Query: 390 ACGYGHSLVIVD 401
           ACG  H+  +V+
Sbjct: 473 ACGVWHTAAVVE 484



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 128/328 (39%), Gaps = 33/328 (10%)

Query: 95  KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPS 154
           KI    P  +  +    ++    G  H  +VT+ G   ++G    G+LG G   +   P 
Sbjct: 293 KIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVFSWGEEYGGRLGHGGDSDAHHPK 352

Query: 155 PVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            +  L +  +   ACG   T  ++          G    G LGHG D  +          
Sbjct: 353 LIDALSNLNIELVACGEYHTCAVTLSGDLYTWGDGTYNSGLLGHGKDVSHWV-------- 404

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPR 273
               P+ R    L G  I  ++CG  HT  V S G ++T+G G +G LGH ++    +PR
Sbjct: 405 ----PK-RVTGPLQGLHISSISCGPWHTALVTSAGKLFTFGDGTFGVLGHGDRDSISIPR 459

Query: 274 RVDVFQ-RNNVLPPEAVISAGSV-------NSSCTAGGGQLYMWGKLKN----NGDD--W 319
            V+  +    V     V    +V        +S     G+L+ WG        +GD    
Sbjct: 460 EVESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEAR 519

Query: 320 MYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKV 378
           + P  +  L   N   +  G+       +S  I + G   YG+LG  P  Q    +P +V
Sbjct: 520 LVPTCVAALVEPNFCQVACGHSLTVALTNSGHIYTMGSPVYGQLG-NP--QADGKLPARV 576

Query: 379 D-ILEGMHVISVACGYGHSLVIVDRTNV 405
           +  L    V  +ACG  H  V+  RT V
Sbjct: 577 EGKLSKSFVEELACGAYHVAVLTSRTEV 604


>gi|449456530|ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
          Length = 463

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 124/266 (46%), Gaps = 29/266 (10%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
            +R +A G +  H VA++  G+ +TWG    G LGH    +   P +V    + +IK   
Sbjct: 169 SVRCIALGGL--HSVALNALGQVFTWGYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIA 226

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-------PSPVRCLVSEVTATACG 169
              +HT  +TE G    +G ++                     P  VR L + V A +CG
Sbjct: 227 TSGAHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCG 286

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
             FT+ L  V+G  + N G     +LG G +             +E +P P    +L   
Sbjct: 287 GFFTMALG-VDG-KLWNWGANTNFELGRGNNIG----------GWEPKPVP----SLEDT 330

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV 289
            I+++ CG  H++ +   G V +WG+GG+G+LGH   ++E VPR +D      V+    +
Sbjct: 331 PIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVI---YI 387

Query: 290 ISAGSVNSSCTAGGGQLYMWGKLKNN 315
              GS +++ TA  G+LYMWG  K++
Sbjct: 388 ACCGSSSAAVTA-EGKLYMWGNAKDS 412



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 127/336 (37%), Gaps = 62/336 (18%)

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
           +  +WGR   GQLG G +  R  P+ V+ LS   I           +    G   +F  +
Sbjct: 60  QLLSWGRGSSGQLGGGIEEIRLYPSPVANLSVPNIHN---------LALAPGQLPSFSGD 110

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGH 197
                  GS    I      C +   +    G    VW+           G    G+LG 
Sbjct: 111 NQDSGDDGSFELGIS-----CGLFHSSLLVNG---KVWI----------WGKGDGGRLGF 152

Query: 198 GTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           G +N       + +L                E++  +A G  H+VA+++ G V+TWG+GG
Sbjct: 153 GHENPVFVPTLNSRL----------------ESVRCIALGGLHSVALNALGQVFTWGYGG 196

Query: 258 YGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------ 311
           +G LGH     E VPR V+   R  +   + + ++G+  ++ T   G++Y WG+      
Sbjct: 197 FGALGHSVYHRELVPRLVEGSWRGRI---KHIATSGAHTAAITE-SGEVYTWGRDEGDGR 252

Query: 312 -------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
                    N G     P  +  L          G     +G D    +WG     ELG 
Sbjct: 253 LGLGPGRGPNEGGGLSIPCRVRALPAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGR 312

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           G         PK V  LE   +I + CG  HSLV+ 
Sbjct: 313 G--NNIGGWEPKPVPSLEDTPIIQIVCGGYHSLVLT 346



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/128 (34%), Positives = 62/128 (48%), Gaps = 4/128 (3%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRP 101
           G L  P R+R L        A  C     +A+ V+G+ + WG N   +LG G+ I    P
Sbjct: 265 GGLSIPCRVRAL---PAPVAAVSCGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEP 321

Query: 102 TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS 161
             V  L    I +   G  H++V+T DG  L++G+  HGQLG  SI+NE  P  +  L  
Sbjct: 322 KPVPSLEDTPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALAD 381

Query: 162 E-VTATAC 168
           + V   AC
Sbjct: 382 KRVIYIAC 389



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 40/240 (16%)

Query: 68  CHCVAVDVEGRCYTWGRNE-----------RGQLGHGDKIQ---RDRPTIVSELSKYKIK 113
            H  A+   G  YTWGR+E               G G  I    R  P  V+ +S     
Sbjct: 230 AHTAAITESGEVYTWGRDEGDGRLGLGPGRGPNEGGGLSIPCRVRALPAPVAAVS----- 284

Query: 114 KAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADF 172
               G   T+ +  DG    +G N + +LG G+     EP PV  L  + +    CG   
Sbjct: 285 ---CGGFFTMALGVDGKLWNWGANTNFELGRGNNIGGWEPKPVPSLEDTPIIQIVCGGYH 341

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           ++ L+      +L+ G   +GQLGH          SS+    + +  PR I ALA + ++
Sbjct: 342 SLVLTG--DGKVLSWGYGGHGQLGH----------SSI----QNEKVPRVIDALADKRVI 385

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNVLPPEAVIS 291
            +AC  + + AV ++G +Y WG     +LG     + +  P  V     ++ L P  V+S
Sbjct: 386 YIACCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLPEVQTSPVEVIFLTEDDGLGPYHVLS 445



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 78/344 (22%), Positives = 129/344 (37%), Gaps = 35/344 (10%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V G+ + WG+ + G+LG G +     PT+ S L    ++    G  H+V +   G    +
Sbjct: 135 VNGKVWIWGKGDGGRLGFGHENPVFVPTLNSRLE--SVRCIALGGLHSVALNALGQVFTW 192

Query: 135 GWNKHGQLGSGSIRNEIEPSPVR-CLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           G+   G LG      E+ P  V       +   A     T  ++  E   +   G  +  
Sbjct: 193 GYGGFGALGHSVYHRELVPRLVEGSWRGRIKHIATSGAHTAAIT--ESGEVYTWGRDEGD 250

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
                       +   + +    +  P  +AA        V+CG   T+A+   G ++ W
Sbjct: 251 GRLGLGPGRGPNEGGGLSIPCRVRALPAPVAA--------VSCGGFFTMALGVDGKLWNW 302

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW---- 309
           G      LG       W P+ V   +      P   I  G  +S    G G++  W    
Sbjct: 303 GANTNFELGRGNNIGGWEPKPVPSLEDT----PIIQIVCGGYHSLVLTGDGKVLSWGYGG 358

Query: 310 -GKLKNNG-DDWMYPK---PLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
            G+L ++   +   P+    L D     + C  S +    V A+     WG+A+  +LG 
Sbjct: 359 HGQLGHSSIQNEKVPRVIDALADKRVIYIACCGSSSAA--VTAEGKLYMWGNAKDSQLGV 416

Query: 365 GPYGQKSSAMPKKV------DILEGMHVISVACGYGHSLVIVDR 402
            P   +    P +V      D L   HV+SVA G  H++ +V R
Sbjct: 417 -PGLPEVQTSPVEVIFLTEDDGLGPYHVLSVAVGASHAMCLVLR 459



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAG 116
           D   +   C   H + +  +G+  +WG    GQLGH        P ++  L+  ++    
Sbjct: 329 DTPIIQIVCGGYHSLVLTGDGKVLSWGYGGHGQLGHSSIQNEKVPRVIDALADKRVIYIA 388

Query: 117 AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
              S +  VT +G    +G  K  QLG   +  E++ SPV  + 
Sbjct: 389 CCGSSSAAVTAEGKLYMWGNAKDSQLGVPGLP-EVQTSPVEVIF 431


>gi|401883925|gb|EJT48106.1| hypothetical protein A1Q1_02916 [Trichosporon asahii var. asahii
           CBS 2479]
          Length = 481

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 32/303 (10%)

Query: 9   MVEEETGKEKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC 68
           M  E+T ++  G +L CG T             G+L  P  LR L  + +  V +GC + 
Sbjct: 1   MTAEQT-EDNWGRVLICGGT----------DCAGDLNEPYILRSLCHIKVTKVLSGCAAN 49

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTED 128
           + +A+DV         +++G + H D      P  V   +  K     AGRSH  ++   
Sbjct: 50  YGIAIDV---------SKKGIVPH-DAPMHVSPRNVGLGNDVKWVGGAAGRSHWFLLDSK 99

Query: 129 GNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G     G N  GQLG       I P P      +V     G  F+++L+  +   +   G
Sbjct: 100 GGVWGSGNNVVGQLGLVETLERI-PGPWTRAGEKVVQVTAGHTFSLFLT--DAGKVYACG 156

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             ++GQLG+GT  E   K  + K +Y+ Q  P       G+ I +++ G  H++A+D  G
Sbjct: 157 SSEHGQLGNGTTGERLVK--AGKTSYDVQAPPHT---FEGKKIAQISSGNQHSLALDEDG 211

Query: 249 YVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
            VY WG+ GY RLG  +QKD+ VP  V  F  +N       +  G  N      GGQ+  
Sbjct: 212 NVYAWGYAGYARLGLGDQKDQLVPTLVPQFSDSNPKRRAETVICGPTN---VPHGGQVEA 268

Query: 309 WGK 311
            G+
Sbjct: 269 DGR 271


>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Saimiri boliviensis boliviensis]
          Length = 979

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Nomascus leucogenys]
          Length = 1049

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 20/233 (8%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSE 162
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ LV  
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGI 190

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
                       ++ ++ GA I   G  ++GQLG   +N+                 P  
Sbjct: 191 PFMQVAAGGAHSFVLTLSGA-IFGWGRNKFGQLGLNDENDRYV--------------PNL 235

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ V  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLL----KSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
          Length = 928

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G +              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIEC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E + +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 50/215 (23%), Positives = 74/215 (34%), Gaps = 66/215 (30%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++                    
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVA-------------------- 80

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQK 370
                           L   N+  +  G  H     D   + +WG    G+LG     ++
Sbjct: 81  ----------------LDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG-SEE 123

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
              +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 124 CIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D   V
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTV 55


>gi|159037173|ref|YP_001536426.1| chromosome condensation regulator RCC1 [Salinispora arenicola
           CNS-205]
 gi|157916008|gb|ABV97435.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
           CNS-205]
          Length = 569

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 87/284 (30%), Positives = 121/284 (42%), Gaps = 29/284 (10%)

Query: 31  DAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           +AVG+       N  +P  +R   G  +  VAAG    H +A+   G  + WG N  GQL
Sbjct: 123 NAVGQLGDGTTINRSTPVDVRLPPGTTVTAVAAGF--NHSLALTSAGTVFAWGDNSTGQL 180

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNE 150
           G G +  R  P  VS  S   I    AG  H++ +T  G   A+G N  GQLG G+  N 
Sbjct: 181 GDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQLGDGTRTNR 240

Query: 151 IEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSS 209
             P  V   V   VTA A G   ++ ++S   A          GQLG G++     +D+S
Sbjct: 241 STPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNF--VGQLGDGSNIN---RDAS 295

Query: 210 VKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDE 269
           V +               G T+  VA G  H++A+ S G V +WG   +G+LG    +D 
Sbjct: 296 VHVRLP-----------PGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDR 344

Query: 270 WVPRRVDVFQRNNVLPPEAVIS---AGSVNSSCTAGGGQLYMWG 310
             P  V        LPP   I+   AG +        G +  WG
Sbjct: 345 NTPGSVS-------LPPGVTITAVAAGDLFGLALTSAGTVLAWG 381



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 146/359 (40%), Gaps = 42/359 (11%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           G ++   A G    H +AV   G    WGRN  GQLG G  I R  P  V       +  
Sbjct: 95  GTEVTAAAGG--DAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTPVDVRLPPGTTVTA 152

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGADFT 173
             AG +H++ +T  G   A+G N  GQLG G+  N   P  V      V TA A G   +
Sbjct: 153 VAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHS 212

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
           + L+S    ++   G    GQLG GT    +T              P  +    G  +  
Sbjct: 213 LALTSA--GTVFAWGDNSTGQLGDGTRTNRST--------------PVVVGLPVGTIVTA 256

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA- 292
           +A G +H++AV S G    WG    G+LG     +    R   V  R   LPP   ++A 
Sbjct: 257 IAGGGSHSLAVTSAGNARAWGNNFVGQLGDGSNIN----RDASVHVR---LPPGTTVTAV 309

Query: 293 --GSVNSSCTAGGGQLYMWGKLKNN----GD----DWMYPKPLMDLSGWNLRCMDSGNMH 342
             G  +S      G +  WG   NN    GD    D   P  +    G  +  + +G++ 
Sbjct: 310 AGGLTHSLALTSVGTVLSWG--SNNWGQLGDGTARDRNTPGSVSLPPGVTITAVAAGDLF 367

Query: 343 HF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
              + +  + ++WG    G+LG G    + +  P    +     + ++A G GHSL +V
Sbjct: 368 GLALTSAGTVLAWGGNIVGQLGDGTTTVRRT--PVAASLPTATTITAIATGSGHSLALV 424



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 90/322 (27%), Positives = 133/322 (41%), Gaps = 35/322 (10%)

Query: 82  WGRNERGQLGHGDKIQ-RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG N  GQLG G     R  P  V      ++  A  G +H++ VT  G  LA+G N  G
Sbjct: 67  WGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSAGTVLAWGRNAVG 126

Query: 141 QLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           QLG G+  N   P  VR L    T TA  A F   L+     ++   G    GQLG GT 
Sbjct: 127 QLGDGTTINRSTPVDVR-LPPGTTVTAVAAGFNHSLALTSAGTVFAWGDNSTGQLGDGTR 185

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
              +T              P A++  +G  I  VA G  H++A+ S G V+ WG    G+
Sbjct: 186 TNRST--------------PVAVSFPSGTVITAVAAGGMHSLALTSAGTVFAWGDNSTGQ 231

Query: 261 LGHREQKDEWVPRRVDVFQRNNVLPPEAVISA---GSVNSSCTAGGGQLYMW-----GKL 312
           LG   + +   P  V        LP   +++A   G  +S      G    W     G+L
Sbjct: 232 LGDGTRTNRSTPVVVG-------LPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQL 284

Query: 313 KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS--SCISWGHAQYGELGYGPYGQK 370
            +  +        + L         +G + H +   S  + +SWG   +G+LG G    +
Sbjct: 285 GDGSNINRDASVHVRLPPGTTVTAVAGGLTHSLALTSVGTVLSWGSNNWGQLGDGTARDR 344

Query: 371 SSAMPKKVDILEGMHVISVACG 392
           ++  P  V +  G+ + +VA G
Sbjct: 345 NT--PGSVSLPPGVTITAVAAG 364



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 127/287 (44%), Gaps = 34/287 (11%)

Query: 132 LAFGWNKHGQLGSGSIRN-EIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGL 189
           LA+G N +GQLG G+  N    P PV     +EVTA A G   ++ ++S    ++L  G 
Sbjct: 65  LAWGDNYYGQLGDGTTNNYRTVPIPVGLPKGTEVTAAAGGDAHSLAVTSA--GTVLAWGR 122

Query: 190 PQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGY 249
              GQLG GT     T + S  +     P         G T+  VA G NH++A+ S G 
Sbjct: 123 NAVGQLGDGT-----TINRSTPVDVRLPP---------GTTVTAVAAGFNHSLALTSAGT 168

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V+ WG    G+LG   + +   P  V  F    V+     ++AG ++S      G ++ W
Sbjct: 169 VFAWGDNSTGQLGDGTRTNRSTPVAVS-FPSGTVI---TAVAAGGMHSLALTSAGTVFAW 224

Query: 310 GKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGEL 362
           G       GD    +   P  +    G  +  +  G  H   V +  +  +WG+   G+L
Sbjct: 225 GDNSTGQLGDGTRTNRSTPVVVGLPVGTIVTAIAGGGSHSLAVTSAGNARAWGNNFVGQL 284

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERL 409
           G G    + +++   V +  G  V +VA G  HSL +   T+VG  L
Sbjct: 285 GDGSNINRDASV--HVRLPPGTTVTAVAGGLTHSLAL---TSVGTVL 326



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 68/238 (28%), Positives = 99/238 (41%), Gaps = 32/238 (13%)

Query: 177 SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVAC 236
           ++V   ++L  G   YGQLG GT N Y T    V L       P+      G  +   A 
Sbjct: 57  TTVASDAVLAWGDNYYGQLGDGTTNNYRTVPIPVGL-------PK------GTEVTAAAG 103

Query: 237 GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVIS---AG 293
           G  H++AV S G V  WG    G+LG     +   P  VDV      LPP   ++   AG
Sbjct: 104 GDAHSLAVTSAGTVLAWGRNAVGQLGDGTTINRSTP--VDVR-----LPPGTTVTAVAAG 156

Query: 294 SVNSSCTAGGGQLYMWGKLKNN--GD----DWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
             +S      G ++ WG       GD    +   P  +   SG  +  + +G MH   + 
Sbjct: 157 FNHSLALTSAGTVFAWGDNSTGQLGDGTRTNRSTPVAVSFPSGTVITAVAAGGMHSLALT 216

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTN 404
           +  +  +WG    G+LG G    +S+  P  V +  G  V ++A G  HSL +    N
Sbjct: 217 SAGTVFAWGDNSTGQLGDGTRTNRST--PVVVGLPVGTIVTAIAGGGSHSLAVTSAGN 272


>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
            glaber]
          Length = 3493

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 90/341 (26%), Positives = 152/341 (44%), Gaps = 37/341 (10%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 2668 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 2724

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 2725 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 2784

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLV--------SEVTATACGADFTVWLSSVEGASILNA 187
               +G+LG G+  N+  P  V  L         ++  + ACG + T+ +S+ +G+ +   
Sbjct: 2785 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGLNHTLAVST-DGSMVWAF 2843

Query: 188  GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
            G   YG+LG G                 A+  P+ +  L G  I KVACGT  +VA+   
Sbjct: 2844 GDGDYGKLGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKD 2889

Query: 248  GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            G+VYT+G      L     ++   P++V V     +      ++ G+ ++   A  G +Y
Sbjct: 2890 GHVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALASTGDVY 2945

Query: 308  MWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
             WG          + +    P  +  L G N+R + +G  H
Sbjct: 2946 AWGSNSEGQLGLGHTNHVREPTLVTVLQGKNIRQISAGRCH 2986



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 142/331 (42%), Gaps = 70/331 (21%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  + WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 2620 GKCDVFLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 2676

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 2677 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 2735

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 2736 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 2781

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV   +   +                    GQ   W K
Sbjct: 2782 TFGNGDYGRLGLGNTSNKKLPERVTALEGYQI--------------------GQ--AWNK 2819

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHAQYGELGYGPYGQ 369
                               +++ C   G  H   V  D S + ++G   YG+LG G    
Sbjct: 2820 ------------------SYSVAC---GLNHTLAVSTDGSMVWAFGDGDYGKLGLGNSTA 2858

Query: 370  KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 2859 KSS--PQKVDVLCGIGIKKVACGTQFSVALT 2887



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G  + H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 2914 PQQVPVLAGVVIEDVAVG--AEHTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 2971

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    I++  AGR H+   T
Sbjct: 2972 LQGKNIRQISAGRCHSAAWT 2991


>gi|334185062|ref|NP_001189802.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
           domain-containing protein [Arabidopsis thaliana]
 gi|332640473|gb|AEE73994.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
           domain-containing protein [Arabidopsis thaliana]
          Length = 1099

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
           P R+  L G  I+ V+A     H VA+   G  YTWG    G+LGH       G      
Sbjct: 177 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 234

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
              ++S L   ++K   A + HTV+ TE G+   +G N+ GQLG  S+  +  P  V  L
Sbjct: 235 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 294

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +++ A +     T  +S  +   +   G  + GQLG+GT N  +               
Sbjct: 295 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 340

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+    +A    HT+ + + G VYTW        GHR       PRRV +  
Sbjct: 341 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHR----LVTPRRVIISR 388

Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
                      F R   L   A I+AG V+S   A  G  + W                 
Sbjct: 389 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 432

Query: 327 DLSGWNLRCMDSGNMH 342
             S  NLRC    ++H
Sbjct: 433 --SDSNLRCQQLHSLH 446



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 29/202 (14%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           Q  P  + +L G  I  V+    H+VA+ + G VYTWGFG  GRLGH E          D
Sbjct: 174 QKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------FD 224

Query: 277 VFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGDD 318
           +   +  V+ P  VIS           A   ++     GG +Y WG  +       + D 
Sbjct: 225 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 284

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P+ +  L    +  + + N H  V +D     +WG  + G+LGYG     S+  P+ 
Sbjct: 285 QATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRL 343

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           VD L+G    ++A    H+LV+
Sbjct: 344 VDYLKGKVFTAIASSKYHTLVL 365



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 102/246 (41%), Gaps = 31/246 (12%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G++  +  P  V  L    IK   A + H+V ++  G    +
Sbjct: 151 VATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTW 210

Query: 135 GWNKHGQLGSGSIRNEIEPSPV---RCLVS-----EVTATACGADFTVWLSSVEGASILN 186
           G+ + G+LG          + V   R ++S      V A A     TV   + EG  +  
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYT 268

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + GQLG      Y + D+        Q  PR + +L  + IV V+    HT  V  
Sbjct: 269 WGSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAVVSD 313

Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            G V+TWG    G+LG+        + PR VD + +  V      I++   ++      G
Sbjct: 314 CGEVFTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDG 369

Query: 305 QLYMWG 310
           ++Y WG
Sbjct: 370 EVYTWG 375



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++WG G   +LG   Q  + VP RVD      +     ++SA   +S   +  G++Y W
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 210

Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
           G          +   +        P   +SG   R +   +   HH V A       +WG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 270

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             + G+LGY      + A P+KV  L+   +++V+    H+ V+ D
Sbjct: 271 SNREGQLGYTSVD--TQATPRKVTSLKA-KIVAVSAANKHTAVVSD 313


>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
          Length = 1049

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G +              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIEC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E + +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD 51


>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Papio anubis]
          Length = 979

 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   I++VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + +I VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIIQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Papio anubis]
          Length = 1049

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   I++VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + +I VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIIQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
           mulatta]
          Length = 1049

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   I++VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + +I VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIIQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
           garnettii]
          Length = 1049

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 113/233 (48%), Gaps = 20/233 (8%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSE 162
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ LV  
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGLDCKKQTSPQLIKSLVGI 190

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
                       ++ ++ GA I   G  ++GQLG   +N+                 P  
Sbjct: 191 PFMQVAAGGAHSFVLTLSGA-IFGWGRNKFGQLGLNDENDRYV--------------PNL 235

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGLDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ V  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGLDCKKQTSPQLI----KSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
           containing protein [Acanthamoeba castellanii str. Neff]
          Length = 417

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 139/364 (38%), Gaps = 75/364 (20%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           D  +  PT   P   + I  +  G    H +A+   G  Y WG +E GQ G G+K  +  
Sbjct: 125 DKRIYYPTLCEPAQSLGIVKIRTG--RQHGIALSKNGEVYIWGNSEFGQTGLGNKEAQHL 182

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
           P  +       I     G  H+  V++DG    +G+   GQLG     +E++P  +  + 
Sbjct: 183 PIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWGYGIDGQLGHNGTEDELKPKELTVIR 242

Query: 161 SE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            E ++   CG DFT  L+  EG  +   G  + GQLGHG +     + S V L       
Sbjct: 243 GEGISRVTCGTDFTGLLNETEG-RLFTFGNGEAGQLGHG-ERGLCLEPSVVPL------- 293

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
                    + + +VA G  H +A+   G  ++WG+G  GRLGH   +D           
Sbjct: 294 ---------DNVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHGATED----------- 333

Query: 280 RNNVLPPEAVISAGSVNS--SCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMD 337
               L PE + + G      S +AGGG                           +L   +
Sbjct: 334 ---FLKPEPIPTLGPAVGVVSVSAGGGH--------------------------SLALTE 364

Query: 338 SGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
           SG ++           WG    G LG G   + S   P  +  L    V+   CG  HSL
Sbjct: 365 SGQVY----------GWGFNASGRLGLG--NESSVMTPTLIKALADKRVLRAICGLDHSL 412

Query: 398 VIVD 401
            I  
Sbjct: 413 FITQ 416



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 137/338 (40%), Gaps = 37/338 (10%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELS-KYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
           YT G     QLG GD      P  V EL        A AG +   ++T       + W  
Sbjct: 56  YTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTT--RHELYYWGS 113

Query: 139 HGQLGSGSIRNEIEPS-PVRCLVSE---VTATACGADFTVWLSSVEGASILNAGLPQYGQ 194
            G      +R +     P  C  ++   +     G    + LS  +   +   G  ++GQ
Sbjct: 114 SGVYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALS--KNGEVYIWGNSEFGQ 171

Query: 195 LGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWG 254
            G G                EAQ  P  +     ++IV V+CG +H+ AV   G V+TWG
Sbjct: 172 TGLGNK--------------EAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDGRVWTWG 217

Query: 255 FGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK- 313
           +G  G+LGH   +DE  P+ + V +   +     V              G+L+ +G  + 
Sbjct: 218 YGIDGQLGHNGTEDELKPKELTVIRGEGI---SRVTCGTDFTGLLNETEGRLFTFGNGEA 274

Query: 314 ---NNGDDWMYPKP-LMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG 368
               +G+  +  +P ++ L   N++ + +G  H   +  D    SWG  + G LG+G   
Sbjct: 275 GQLGHGERGLCLEPSVVPLD--NVKEVAAGGAHMLALTKDGQAWSWGWGEDGRLGHG--A 330

Query: 369 QKSSAMPKKVDIL-EGMHVISVACGYGHSLVIVDRTNV 405
            +    P+ +  L   + V+SV+ G GHSL + +   V
Sbjct: 331 TEDFLKPEPIPTLGPAVGVVSVSAGGGHSLALTESGQV 368



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQ 89
           W   GR       + + P  + P +G  +  V+      H +A+   G+ Y WG N  G+
Sbjct: 320 WGEDGRLGHGATEDFLKPEPI-PTLGPAVGVVSVSAGGGHSLALTESGQVYGWGFNASGR 378

Query: 90  LGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE 127
           LG G++     PT++  L+  ++ +A  G  H++ +T+
Sbjct: 379 LGLGNESSVMTPTLIKALADKRVLRAICGLDHSLFITQ 416


>gi|410896622|ref|XP_003961798.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Takifugu
           rubripes]
          Length = 531

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 119/254 (46%), Gaps = 34/254 (13%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +    +G  + WG N   QLG+G   Q   P +VS  L   K+ +   G  H++ +T+
Sbjct: 86  HILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTD 145

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGAS 183
            G   A+G+N  GQ+GSGS  N  +P+P R   CL + V  +  CG   T  L+ V+   
Sbjct: 146 SGEVYAWGYNNCGQVGSGSTAN--QPTPRRVSSCLQNRVAVSIVCGQ--TSSLAVVDNGE 201

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G    GQLG G +                Q  P  + AL G  + +V  G  H++A
Sbjct: 202 VYGWGYNGNGQLGLGNNGN--------------QLTPCRLVALQGLCVQQVVSGYAHSLA 247

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           +  +G +Y WG   YG+LG   + ++  P ++       +   E ++   + +S+ T+  
Sbjct: 248 LTDEGLLYAWGANTYGQLGTGNKSNQLSPVQI-------MTEKERIVEIAACHSTHTSAA 300

Query: 304 ----GQLYMWGKLK 313
               GQ+YMWG+ +
Sbjct: 301 KTQSGQVYMWGQCR 314



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 38/305 (12%)

Query: 106 ELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-S 161
           ELS   I+KA   G   +  + +T D    AFG N    LG+G  +  I P  V  L   
Sbjct: 17  ELST--IRKAYVFGTSANEAIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGR 74

Query: 162 EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPR 221
           +V + + G+   + L++ +G  +   G   Y QLG+GT N+                 P 
Sbjct: 75  KVVSLSYGSGPHILLATEDG-ELFAWGHNGYSQLGNGTTNQ--------------GVAPV 119

Query: 222 AIAA-LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
            ++A L    + +VACG++H++A+   G VY WG+   G++G     ++  PRRV    +
Sbjct: 120 LVSATLLNRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQ 179

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNL 333
           N V      I  G  +S      G++Y WG        L NNG+  + P  L+ L G  +
Sbjct: 180 NRV---AVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLVALQGLCV 235

Query: 334 RCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-AC 391
           + + SG  H     D   + +WG   YG+LG    G KS+ +     + E   ++ + AC
Sbjct: 236 QQVVSGYAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMTEKERIVEIAAC 292

Query: 392 GYGHS 396
              H+
Sbjct: 293 HSTHT 297



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 89/213 (41%), Gaps = 23/213 (10%)

Query: 44  LVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTI 103
           LVS T L      + +     C S H +A+   G  Y WG N  GQ+G G    +  P  
Sbjct: 120 LVSATLL------NRKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRR 173

Query: 104 VSELSKYKIKKA-GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
           VS   + ++  +   G++ ++ V ++G    +G+N +GQLG G+  N++ P  +  L   
Sbjct: 174 VSSCLQNRVAVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVAL-QG 232

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           +      + +   L+  +   +   G   YGQLG G  +               Q  P  
Sbjct: 233 LCVQQVVSGYAHSLALTDEGLLYAWGANTYGQLGTGNKSN--------------QLSPVQ 278

Query: 223 IAALAGETIVKVACGTNHTVAVDSK-GYVYTWG 254
           I       +   AC + HT A  ++ G VY WG
Sbjct: 279 IMTEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P RL  L G+ ++ V +G    H +A+  EG  Y WG N  GQLG G+K  +  
Sbjct: 218 NGNQLTPCRLVALQGLCVQQVVSG--YAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 275

Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
           P  +    +  ++ A    +HT
Sbjct: 276 PVQIMTEKERIVEIAACHSTHT 297



 Score = 41.6 bits (96), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 75/177 (42%), Gaps = 16/177 (9%)

Query: 239 NHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS 298
           N  + + S   VY +G      LG  + +   VP++VD+     V+     +S GS    
Sbjct: 32  NEAIYITSDDEVYAFGLNCSNCLGTGDSQCTIVPKKVDILSGRKVVS----LSYGSGPHI 87

Query: 299 CTAG-GGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS- 349
             A   G+L+ WG     +L N   +      L+  +  N +  +   G+ H     DS 
Sbjct: 88  LLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSATLLNRKVTEVACGSHHSMALTDSG 147

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVD-ILEGMHVISVACGYGHSLVIVDRTNV 405
              +WG+   G++G G    + +  P++V   L+    +S+ CG   SL +VD   V
Sbjct: 148 EVYAWGYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIVCGQTSSLAVVDNGEV 202


>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
           1 [Equus caballus]
          Length = 1049

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLHDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D             Y
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGID-------------Y 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D + P  
Sbjct: 176 KKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYFPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V  DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGIDYKKQASPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D  +P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYFPNLLKSLRTQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158


>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
           jacchus]
          Length = 1049

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ +    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|225439268|ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
          Length = 1076

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 121/280 (43%), Gaps = 45/280 (16%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ V+A     H VAV   G  YTWG    G+LGH +  I   +  +++
Sbjct: 178 PCKVDSLHGTFIKSVSAA--KFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   ++K   A + HTVV TE G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S++ A A     T  +S  E   +   G  + GQLG+GT N  +               
Sbjct: 296 KSKIVAVAAANKHTAVIS--ESGEVFTWGCNKKGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+ +  VA    HT+ + + G ++TW        GHR       PRRV +  
Sbjct: 342 PRVVEYLKGKVLKGVAAAKYHTIVLGADGEIFTW--------GHR----LVTPRRVVIVR 389

Query: 278 -FQRNNVLPPE-------AVISAGSVNSSCTAGGGQLYMW 309
             ++N   P +         I+AG V+S      G ++ W
Sbjct: 390 NLKKNGSTPLKFHQRLHVVSIAAGMVHSMALTEDGAIFYW 429



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 17/196 (8%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
           Q  P  + +L G  I  V+    H+VAV ++G VYTWGFG  GRLGH E      Q    
Sbjct: 175 QKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTWGFGRGGRLGHPEFDIHSGQAAVI 234

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKP 324
            PR+V +   +  +     I+A   ++     GG+++ WG  +       + D    P+ 
Sbjct: 235 TPRQVTMGLGSRRV---KAIAAAKHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRR 291

Query: 325 LMDLSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
           +  L    +  + + N H  V ++S    +WG  + G+LGYG     S+  P+ V+ L+G
Sbjct: 292 VSSLKS-KIVAVAAANKHTAVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKG 350

Query: 384 MHVISVACGYGHSLVI 399
             +  VA    H++V+
Sbjct: 351 KVLKGVAAAKYHTIVL 366



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 100/244 (40%), Gaps = 27/244 (11%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G+   +  P  V  L    IK   A + H+V V+  G    +
Sbjct: 152 VATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVSARGEVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAG 188
           G+ + G+LG             I P  V   +      A  A     + + EG  +   G
Sbjct: 212 GFGRGGRLGHPEFDIHSGQAAVITPRQVTMGLGSRRVKAIAAAKHHTVVATEGGEVFTWG 271

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
             + GQLG      Y + D+        QP PR +++L  + IV VA    HT  +   G
Sbjct: 272 SNREGQLG------YTSVDT--------QPIPRRVSSLKSK-IVAVAAANKHTAVISESG 316

Query: 249 YVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQL 306
            V+TWG    G+LG+        + PR V+ + +  VL     ++A   ++      G++
Sbjct: 317 EVFTWGCNKKGQLGYGTSNSASNYTPRVVE-YLKGKVL---KGVAAAKYHTIVLGADGEI 372

Query: 307 YMWG 310
           + WG
Sbjct: 373 FTWG 376



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 126/295 (42%), Gaps = 33/295 (11%)

Query: 124 VVTEDGNSLA---FGWNK--HGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSS 178
           VV  + +S+A   F W    + QLG+G+   +  P  V  L      +   A F     S
Sbjct: 144 VVGSERDSVATELFSWGSGVNYQLGTGNTHIQKLPCKVDSLHGTFIKSVSAAKFHSVAVS 203

Query: 179 VEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK-VACG 237
             G  +   G  + G+LGH   + ++ + + +         PR +    G   VK +A  
Sbjct: 204 ARG-EVYTWGFGRGGRLGHPEFDIHSGQAAVIT--------PRQVTMGLGSRRVKAIAAA 254

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
            +HTV     G V+TWG    G+LG+     + +PRRV   +   V      ++A + ++
Sbjct: 255 KHHTVVATEGGEVFTWGSNREGQLGYTSVDTQPIPRRVSSLKSKIV-----AVAAANKHT 309

Query: 298 SCTAGGGQLYMWGKLK--------NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV-GAD 348
           +  +  G+++ WG  K        +N      P+ +  L G  L+ + +   H  V GAD
Sbjct: 310 AVISESGEVFTWGCNKKGQLGYGTSNSASNYTPRVVEYLKGKVLKGVAAAKYHTIVLGAD 369

Query: 349 SSCISWGH--AQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +WGH       +      +K+ + P K    + +HV+S+A G  HS+ + +
Sbjct: 370 GEIFTWGHRLVTPRRVVIVRNLKKNGSTPLKFH--QRLHVVSIAAGMVHSMALTE 422


>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
          Length = 1057

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++     ++G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 34/351 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   +CG   ++ LS  + + + + G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVSCGYYHSLALS--KASEVFSWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDL 328
           +   +   ++     I  G  +++     G ++      +G+L  N+    + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 144/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+V+CG  H++A+     V++WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEVFSWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 45.8 bits (107), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ V+CGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVSCGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Nomascus leucogenys]
          Length = 1057

 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 20/233 (8%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSE 162
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ LV  
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGI 190

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
                       ++ ++ GA I   G  ++GQLG   +N+                 P  
Sbjct: 191 PFMQVAAGGAHSFVLTLSGA-IFGWGRNKFGQLGLNDENDRYV--------------PNL 235

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ V  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLL----KSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
 gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
          Length = 1057

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIECQKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 150/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    V   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFVNKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G +              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIEC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 QKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
                      ++ + E    PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 118 -----------LQGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   E + +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGIECQKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           YGQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   YGQLGLGGIDE------------EIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLQG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 39.3 bits (90), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A YG+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLD 51


>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Nomascus leucogenys]
          Length = 979

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 20/233 (8%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCLVSE 162
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ LV  
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLVGI 190

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
                       ++ ++ GA I   G  ++GQLG   +N+                 P  
Sbjct: 191 PFMQVAAGGAHSFVLTLSGA-IFGWGRNKFGQLGLNDENDRYV--------------PNL 235

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ V  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLL----KSLVGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
 gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
          Length = 413

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 150/339 (44%), Gaps = 44/339 (12%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  ++G+LG  +   +  P +   L  ++      G +HT+++T+ G   A G N  GQ
Sbjct: 33  WGNGDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQ 92

Query: 142 LGSGSIRNE--IEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG   +++E   +P  V          A G   +  ++S     +   G    GQLG G 
Sbjct: 93  LGV-PLKSESSFDPVEVHGFPDPCVHIAAGRYHSAAITSSGETYVW--GRNSEGQLGLG- 148

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                      K A      P+ + +LAG  +  +A GT+H++ +   G V +WG   +G
Sbjct: 149 -----------KRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQVLSWGTNRFG 197

Query: 260 RLGHREQ---------KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            LGH E           +E+ PR +   ++  V      +SAG V+S+C    G +Y +G
Sbjct: 198 CLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRS----VSAGLVHSACADDSGTIYSFG 253

Query: 311 K-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGEL 362
           +       L NN +D   P P+ DL    +  +  G  H   +  D    +WG  ++G L
Sbjct: 254 QGSMCQLGLGNN-NDASQPCPIPDLP--RVSSISCGGYHTGAITQDGDIYTWGSNEHGCL 310

Query: 363 GYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           G    G ++S+ P +++ L    +  ++CG+ H+  I D
Sbjct: 311 G---SGFRASSKPLRLESLAEAFMSEISCGWKHTAAISD 346



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 104/222 (46%), Gaps = 30/222 (13%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD---------K 95
           ++P ++  L G+ ++ +A G  + H + +   G+  +WG N  G LGHG+          
Sbjct: 156 ITPQKMESLAGMRLKALALG--TDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKD 213

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
                P I+  L K +++   AG  H+    + G   +FG     QLG G+  +  +P P
Sbjct: 214 TNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCP 273

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           +  L   V++ +CG   T  ++  +   I   G  ++G LG G               + 
Sbjct: 274 IPDL-PRVSSISCGGYHTGAIT--QDGDIYTWGSNEHGCLGSG---------------FR 315

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
           A  +P  + +LA   + +++CG  HT A+ S GY+++WG+GG
Sbjct: 316 ASSKPLRLESLAEAFMSEISCGWKHTAAI-SDGYIFSWGWGG 356



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 142/363 (39%), Gaps = 39/363 (10%)

Query: 65  CVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVV 124
           C   H + +  +GR +  G N  GQLG   K +     +             AGR H+  
Sbjct: 68  CGGAHTLILTDKGRVFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPCVHIAAGRYHSAA 127

Query: 125 VTEDGNSLAFGWNKHGQLGSGSIRNE--IEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
           +T  G +  +G N  GQLG G       I P  +  L    + A A G D ++ L+  E 
Sbjct: 128 ITSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLA--ET 185

Query: 182 ASILNAGLPQYGQLGHGTDNEYNT--KDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
             +L+ G  ++G LGHG    +    KD++       +  PR I  L    +  V+ G  
Sbjct: 186 GQVLSWGTNRFGCLGHGEMTGFFDFFKDTN-------EYTPRIIHCLEKLQVRSVSAGLV 238

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H+   D  G +Y++G G   +LG     D   P  +        LP  + IS G  ++  
Sbjct: 239 HSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIP------DLPRVSSISCGGYHTGA 292

Query: 300 TAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISW 354
               G +Y WG      L +       P  L  L+   +  +  G  H    +D    SW
Sbjct: 293 ITQDGDIYTWGSNEHGCLGSGFRASSKPLRLESLAEAFMSEISCGWKHTAAISDGYIFSW 352

Query: 355 G------------HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
           G             +  G+LG G        +P ++D  + +  + V+CG+ H+  I++ 
Sbjct: 353 GWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIEMD--DRLSALHVSCGFNHTAAILEE 410

Query: 403 TNV 405
             +
Sbjct: 411 IEI 413



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R  +  C   H  A+  +G  YTWG NE G LG G +    +P  +  L++  + +   G
Sbjct: 279 RVSSISCGGYHTGAITQDGDIYTWGSNEHGCLGSGFRAS-SKPLRLESLAEAFMSEISCG 337

Query: 119 RSHTVVVTEDGNSLAFGW------------NKHGQLGSGSIRNEIEPSPVR 157
             HT  ++ DG   ++GW            +  GQLG G+  +  EP P+ 
Sbjct: 338 WKHTAAIS-DGYIFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPIE 387



 Score = 41.6 bits (96), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 41/190 (21%), Positives = 66/190 (34%), Gaps = 49/190 (25%)

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           +Q  P    AL       V+CG  HT+ +  KG V+  G    G+LG   + +       
Sbjct: 48  SQFEPVLCRALESHEPCSVSCGGAHTLILTDKGRVFATGLNSSGQLGVPLKSES----SF 103

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRC 335
           D  + +    P   I+AG  +S+     G+ Y+                           
Sbjct: 104 DPVEVHGFPDPCVHIAAGRYHSAAITSSGETYV--------------------------- 136

Query: 336 MDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
                             WG    G+LG G   +     P+K++ L GM + ++A G  H
Sbjct: 137 ------------------WGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDH 178

Query: 396 SLVIVDRTNV 405
           SL + +   V
Sbjct: 179 SLGLAETGQV 188


>gi|357463175|ref|XP_003601869.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490917|gb|AES72120.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 535

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 154/366 (42%), Gaps = 82/366 (22%)

Query: 58  IRFVAAGCVSC------------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +R++ AG   C            H +AV  +G  Y++G N  GQLGHG   +  RP  + 
Sbjct: 134 LRYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIR 193

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL---GSGSIRNEIEPSPVRCLVSE 162
            L   +I +A AG   T+++T+ G   AFG +  G+    G GS +  I P  V  L + 
Sbjct: 194 TLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGS-KTVIAPRLVESLKNI 252

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
               A   +F   + S EG  +        G+LGH TD+             + +P P  
Sbjct: 253 FVVQAAIGNFFTAVLSREG-RVYTFSWGSDGKLGHHTDSN------------DMEPHP-L 298

Query: 223 IAALAGETIVKVACGTNHTVAV---DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           + AL    +V++A G  + + +    S   VY+ G G  G+LGH  + DE  PR ++ FQ
Sbjct: 299 LGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQ 358

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
             N+ P   VISAG+ +++     G++  WG                             
Sbjct: 359 TLNLQP--MVISAGAWHAAVVGRDGRVCTWG----------------------------- 387

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                         WG  +YG LG+G   ++  A PK VD L  +  + VA G   + V+
Sbjct: 388 --------------WG--RYGCLGHG--NEECEAAPKVVDALTNVKAVHVATGDYTTFVV 429

Query: 400 VDRTNV 405
            +  +V
Sbjct: 430 AEDGDV 435



 Score = 69.7 bits (169), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 53/295 (17%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIV 104
           P  +R L G+ I   AAG  +   + +   G+ Y +G++  G+  +G +  +    P +V
Sbjct: 189 PKPIRTLQGIRIIQAAAG--AGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLV 246

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L    + +A  G   T V++ +G    F W   G+LG  +  N++EP P+   + ++ 
Sbjct: 247 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIP 306

Query: 165 ATACGADFTVWLS---SVEGASILNAGLPQYGQLGHGTDN---------EYNTKDSSVKL 212
                A +   L       G S+ + G    G+LGHGT           ++ T +    +
Sbjct: 307 VVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMV 366

Query: 213 AY-------------------------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                                            E +  P+ + AL     V VA G   T
Sbjct: 367 ISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTT 426

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             V   G VY++G G    LGH    D    R        NVL PE V S   +N
Sbjct: 427 FVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHA------NVLNPELVTSLKQIN 475



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 31/267 (11%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEG-RCYTWGR 84
           W + G+     D N + P    PL+G    + +  +AAG     C+A    G   Y+ G 
Sbjct: 278 WGSDGKLGHHTDSNDMEP---HPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGC 334

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQL 142
              G+LGHG +     P ++ +     ++     AG  H  VV  DG    +GW ++G L
Sbjct: 335 GLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCL 394

Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT--D 200
           G G+   E  P  V  L +         D+T ++ + +G  + + G  +   LGH    D
Sbjct: 395 GHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDG-DVYSFGCGESASLGHNAVID 453

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTN-----HTVAVDSKGYVYTW 253
            E N   + +         P  + +L    E +V+++   +     HT A+   G +Y +
Sbjct: 454 AEGNRHANVLN--------PELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAF 505

Query: 254 GFGGYGRLGHR---EQKDEWVPRRVDV 277
           G G  G+LG      Q +   P +VD+
Sbjct: 506 GAGDKGQLGIELVANQTERVNPEQVDI 532


>gi|26449496|dbj|BAC41874.1| unknown protein [Arabidopsis thaliana]
          Length = 1078

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
           P R+  L G  I+ V+A     H VA+   G  YTWG    G+LGH       G      
Sbjct: 174 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 231

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
              ++S L   ++K   A + HTV+ TE G+   +G N+ GQLG  S+  +  P  V  L
Sbjct: 232 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 291

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +++ A +     T  +S  +   +   G  + GQLG+GT N  +               
Sbjct: 292 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 337

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+    +A    HT+ + + G VYTW        GHR       PRRV +  
Sbjct: 338 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHR----LVTPRRVIISR 385

Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
                      F R   L   A I+AG V+S   A  G  + W                 
Sbjct: 386 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 429

Query: 327 DLSGWNLRCMDSGNMH 342
             S  NLRC    ++H
Sbjct: 430 --SDSNLRCQQLHSLH 443



 Score = 74.7 bits (182), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 29/202 (14%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           Q  P  + +L G  I  V+    H+VA+ + G VYTWGFG  GRLGH E          D
Sbjct: 171 QKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------FD 221

Query: 277 VFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGDD 318
           +   +  V+ P  VIS           A   ++     GG +Y WG  +       + D 
Sbjct: 222 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 281

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P+ +  L    +  + + N H  V +D     +WG  + G+LGYG     S+  P+ 
Sbjct: 282 QATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRL 340

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           VD L+G    ++A    H+LV+
Sbjct: 341 VDYLKGKVFTAIASSKYHTLVL 362



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 101/242 (41%), Gaps = 31/242 (12%)

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            ++WG     QLG G++  +  P  V  L    IK   A + H+V ++  G    +G+ +
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 211

Query: 139 HGQLGSGSIRNEIEPSPV---RCLVS-----EVTATACGADFTVWLSSVEGASILNAGLP 190
            G+LG          + V   R ++S      V A A     TV   + EG  +   G  
Sbjct: 212 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYTWGSN 269

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           + GQLG      Y + D+        Q  PR + +L  + IV V+    HT  V   G V
Sbjct: 270 REGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAVVSDCGEV 314

Query: 251 YTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
           +TWG    G+LG+        + PR VD + +  V      I++   ++      G++Y 
Sbjct: 315 FTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDGEVYT 370

Query: 309 WG 310
           WG
Sbjct: 371 WG 372



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++WG G   +LG   Q  + VP RVD      +     ++SA   +S   +  G++Y W
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 207

Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
           G          +   +        P   +SG   R +   +   HH V A       +WG
Sbjct: 208 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 267

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             + G+LGY      + A P+KV  L+   +++V+    H+ V+ D
Sbjct: 268 SNREGQLGYTSVD--TQATPRKVTSLKA-KIVAVSAANKHTAVVSD 310


>gi|449519078|ref|XP_004166562.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 472

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 45/258 (17%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ----------------- 97
           GV I  VAAG    H +A+   G+ + WG    GQLG G +++                 
Sbjct: 215 GVKIAAVAAG--GRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASA 272

Query: 98  RDRPTIVSELSKYK--------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           +DR +++ + SK          +K    G  H+VVVT+ G  L FGW  +GQ G G+  +
Sbjct: 273 KDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTND 332

Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P+ V  L S +V + + G   TV +++ EG  +   G  Q+GQLG GTD        
Sbjct: 333 LLRPTCVSSLSSTQVESISAGLWHTVCITA-EGL-VYAFGGNQFGQLGTGTDQG------ 384

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E  PR      L G+   +V+CG  H V +   G +++WG+  YG+LG  +  D
Sbjct: 385 ------ETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSID 438

Query: 269 EWVPRRVDV---FQRNNV 283
             +P +V +     RN V
Sbjct: 439 RNIPSKVSIDGCLPRNIV 456



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 128/319 (40%), Gaps = 60/319 (18%)

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEI 151
           GD +    P +V+     KI    AG  HT+ +++ G    +G    GQLG G+ ++   
Sbjct: 199 GDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVS 258

Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P  + C+  E+ A+A                                      KD S  
Sbjct: 259 SPHIIPCI--ELPASA--------------------------------------KDRS-S 277

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
           + Y+A     A   + G  +  +ACG  H+V V   G + T+G+G YG+ G     D   
Sbjct: 278 VIYQASKA--AAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLR 335

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM 326
           P  V       V      ISAG  ++ C    G +Y      +G+L    D       L+
Sbjct: 336 PTCVSSLSSTQV----ESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLL 391

Query: 327 D---LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
           D   L G   + +  G  H+ V  D     SWG  +YG+LG G    ++  +P KV I +
Sbjct: 392 DAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRN--IPSKVSI-D 448

Query: 383 GMHVISVACGYGHSLVIVD 401
           G    ++ CG+ H+L++ +
Sbjct: 449 GCLPRNIVCGWWHTLMLAE 467


>gi|308802742|ref|XP_003078684.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
 gi|116057137|emb|CAL51564.1| FOG: RCC1 domain (ISS) [Ostreococcus tauri]
          Length = 419

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 165/373 (44%), Gaps = 39/373 (10%)

Query: 50  LRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK 109
           +R L  VD+   AAG    H + +   G  +  G N  GQLGHG          + +L  
Sbjct: 60  VRGLEDVDVTQCAAG--GAHSIFLAHGGFVFACGLNNYGQLGHGKHSAHVPEAALVDL-D 116

Query: 110 YKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATA 167
            ++ +  AG +HT+ V  DG   AFG N+ GQLG+G   +  +P  +  L  E  +   A
Sbjct: 117 VEVVRVAAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVDVA 176

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTD--NE---YNTKDSSVKLAYEAQPRPRA 222
            GA+ ++ LS  E A + + G    G LGHG++  NE   Y T  +  K        PR 
Sbjct: 177 SGAEHSLALS--EDARVYSWGTSADGVLGHGSETWNEGWFYRTAKTVAK--------PRL 226

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQ--KDEWVPRRVDVFQR 280
           + AL+   +  +A G  H+  VD +G ++TWG G + +LG   +    E  P+ VD  + 
Sbjct: 227 LRALSETKVRSIAAGHMHSACVDERGELFTWGQGRFNQLGQTSKYVDHETAPKSVDTLRF 286

Query: 281 NNVLPPEAVISAGSVNSSCTA-GGGQLYMWGKLKNNGDDWMYPKPL-MDLSGWNLRCMDS 338
            + +    + +  S ++   + G  Q    G   N+      PKP+ +   GW+   + +
Sbjct: 287 VHQVTCGGLHTLASTSAGVVSWGANQHGELGHGSNSDAKSAIPKPIKLSSRGWSK--LSA 344

Query: 339 GNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSS----AMPKKVDILEGMHV------I 387
           G  H   V  D    +WG    G +G     + SS     +    D  E   V      +
Sbjct: 345 GWKHSAGVSNDGKLFAWGFG--GSVGSHSDEKLSSGGQLGLGNDFDYWEPTEVWLPGDAV 402

Query: 388 SVACGYGHSLVIV 400
            V+CG+ H+L +V
Sbjct: 403 GVSCGFNHTLALV 415



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 72/293 (24%), Positives = 116/293 (39%), Gaps = 73/293 (24%)

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG---SIRNEIEPSPVRCLVS-EVTATACGADFTV 174
           R+ T +   +G+   FG   HGQ+ +    S R+     PVR L   +VT  A G   ++
Sbjct: 23  RAFTALSAGNGD---FGRLGHGQVLTDDDVSFRSSNYFHPVRGLEDVDVTQCAAGGAHSI 79

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
           +L+   G  +   GL  YGQLGHG  + +  + + V L  E               +V+V
Sbjct: 80  FLA--HGGFVFACGLNNYGQLGHGKHSAHVPEAALVDLDVE---------------VVRV 122

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           A G NHT+ VD  G V+ +G    G+LG     D + PRR++       +     +++G+
Sbjct: 123 AAGNNHTLCVDVDGGVWAFGKNEGGQLGTGLDLDGFQPRRIETLALEGKIVD---VASGA 179

Query: 295 VNSSCTAGGGQLYMWGK-----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADS 349
            +S   +   ++Y WG      L +  + W          GW  R               
Sbjct: 180 EHSLALSEDARVYSWGTSADGVLGHGSETWN--------EGWFYRTA------------- 218

Query: 350 SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDR 402
                               K+ A P+ +  L    V S+A G+ HS  + +R
Sbjct: 219 --------------------KTVAKPRLLRALSETKVRSIAAGHMHSACVDER 251



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 57/214 (26%), Positives = 85/214 (39%), Gaps = 31/214 (14%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            +  P  LR L    +R +AAG +  H   VD  G  +TWG+    QLG   K       
Sbjct: 220 TVAKPRLLRALSETKVRSIAAGHM--HSACVDERGELFTWGQGRFNQLGQTSKYVDHETA 277

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE--PSPVRCLV 160
             S  +   + +   G  HT+  T  G  +++G N+HG+LG GS  +     P P++   
Sbjct: 278 PKSVDTLRFVHQVTCGGLHTLASTSAG-VVSWGANQHGELGHGSNSDAKSAIPKPIKLSS 336

Query: 161 SEVTATACG----------ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSV 210
              +  + G               W       S  +  L   GQLG G D +Y  + + V
Sbjct: 337 RGWSKLSAGWKHSAGVSNDGKLFAWGFGGSVGSHSDEKLSSGGQLGLGNDFDY-WEPTEV 395

Query: 211 KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAV 244
            L  +A               V V+CG NHT+A+
Sbjct: 396 WLPGDA---------------VGVSCGFNHTLAL 414


>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
 gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
 gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
          Length = 395

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 44/279 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
           SP  +  L GV I  V A     HC+AVD +GR Y WG NE GQ G   +        ++
Sbjct: 87  SPAPVDALAGVSI--VQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALR 144

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
           RD P       K K+++  AG +H+VV+T+DG+   +G  W        G I+    P  
Sbjct: 145 RDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPP------GDIKQISTPVR 198

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           V+ L   V   A GA     L+  E   +   G  +YGQLG G                +
Sbjct: 199 VQGL-ENVKVIAVGAFHN--LALTEDGILWAWGNNEYGQLGTG----------------D 239

Query: 216 AQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVP 272
            QPR  P  +  L+  ++V +A G  H+ A+  +G VY WG G +GRLG  + K    VP
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVP 299

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           ++V++    +++     +S G  +S      G+++ +G+
Sbjct: 300 QKVELLAGEDII----QVSCGGTHSVALTRDGRMFSYGR 334



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 143/335 (42%), Gaps = 42/335 (12%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   + D    V+ L    +    AG  +++ +  DG    +GWN+ G 
Sbjct: 16  WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75

Query: 142 LG-SGSIRNEIEPSPVRCL--VSEVTATACGADFTVW--LSSVEGASILNAGLPQYGQLG 196
           LG     + E  P+PV  L  VS V A   G     W  L+  +       G  +YGQ G
Sbjct: 76  LGHPPETKTESSPAPVDALAGVSIVQAAIGG-----WHCLAVDDKGRAYAWGGNEYGQCG 130

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
                E   K+   +      P P+  A      + +VA G  H+V +   G+V+TWG  
Sbjct: 131 ----EEAERKEDGTRALRRDIPIPQGCAPKL--KVRQVAAGGTHSVVLTQDGHVWTWG-- 182

Query: 257 GYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
                        W P   +++    R   L    VI+ G+ ++      G L+ WG  +
Sbjct: 183 -----------QPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNE 231

Query: 314 ----NNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                 GD     +P+    LS  +L  + +G  H   +  +    +WG  ++G LG+G 
Sbjct: 232 YGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFG- 290

Query: 367 YGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIV 400
              KSS M P+KV++L G  +I V+CG  HS+ + 
Sbjct: 291 -DDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 159/383 (41%), Gaps = 56/383 (14%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYK 111
           L  + +  V AG  S + +A+  +GR +TWG N+RG LGH  + + +  P  V  L+   
Sbjct: 41  LDALAVSAVVAG--SRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVS 98

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV-TATACGA 170
           I +A  G  H + V + G + A+G N++GQ G  + R E      R L  ++     C  
Sbjct: 99  IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKE---DGTRALRRDIPIPQGCAP 155

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP--------RPRA 222
              V          + AG         GT +   T+D  V    +  P         P  
Sbjct: 156 KLKV--------RQVAAG---------GTHSVVLTQDGHVWTWGQPWPPGDIKQISTPVR 198

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L  E +  +A G  H +A+   G ++ WG   YG+LG  + +    P RV+     +
Sbjct: 199 VQGL--ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS 256

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSGWNLRC 335
           ++     I+AG  +S+     G++Y WG+ ++     GDD    M P+ +  L+G ++  
Sbjct: 257 LVD----IAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQ 312

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG----------M 384
           +  G  H   +  D    S+G   +G LGYG        M   +D+              
Sbjct: 313 VSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQW 372

Query: 385 HVISVACGYGHSLVIVDRTNVGE 407
               VACG  H+L I   T   E
Sbjct: 373 QARYVACGGRHTLAIATWTEADE 395



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 23/280 (8%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G  + GQLG G    E     V  L +  V+A   G+  +  L+      +   G  
Sbjct: 14  LAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNS--LAICADGRLFTWGWN 71

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           Q G LGH  + +            E+ P P  + ALAG +IV+ A G  H +AVD KG  
Sbjct: 72  QRGTLGHPPETKT-----------ESSPAP--VDALAGVSIVQAAIGGWHCLAVDDKGRA 118

Query: 251 YTWGFGGYGRLGHREQKDEWVPR--RVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
           Y WG   YG+ G   ++ E   R  R D+       P   V  ++AG  +S      G +
Sbjct: 119 YAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGGTHSVVLTQDGHV 178

Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
           + WG+    GD      P+      N++ +  G  H+  +  D    +WG+ +YG+LG G
Sbjct: 179 WTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               +S   P +V+ L  + ++ +A G  HS  +     V
Sbjct: 239 DTQPRS--QPIRVEGLSDLSLVDIAAGGWHSTALTKEGEV 276



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            + +P R++ L  V +  V A     H +A+  +G  + WG NE GQLG GD   R +P 
Sbjct: 192 QISTPVRVQGLENVKVIAVGA----FHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPI 247

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
            V  LS   +    AG  H+  +T++G   A+G  +HG+LG G  + + + P  V  L  
Sbjct: 248 RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAG 307

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           E +   +CG   +V L+      + + G   +G+LG+G      T    +++  +  P  
Sbjct: 308 EDIIQVSCGGTHSVALT--RDGRMFSYGRGDHGRLGYG---RKVTTGHPMEVPIDLPPPG 362

Query: 221 RAIAALAGETIVK-VACGTNHTVAV 244
            +     G+   + VACG  HT+A+
Sbjct: 363 TSGGDSGGQWQARYVACGGRHTLAI 387


>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Saimiri boliviensis boliviensis]
          Length = 1057

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 34/351 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKLKNNGDDW-MYPKPLMDL 328
           +   +   ++     I  G  +++     G ++      +G+L +N     + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Gorilla gorilla gorilla]
          Length = 979

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------CK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +I+  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + I  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      +  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD 51


>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Callithrix jacchus]
          Length = 1057

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ +    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKKVQDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLD 51


>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
          Length = 1054

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   I++VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + +I VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIIQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
          Length = 848

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 162/380 (42%), Gaps = 49/380 (12%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +++ P  L   V +D+  +A  C + H      +G  +TWG    G+LGHG      RP 
Sbjct: 243 DVLIPKPLESDVVLDVNQIA--CGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPK 300

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPSPVRCLV 160
           +V  LS   +     G  HT  VT  G+   +G   +  G LG G+  +   P  V   +
Sbjct: 301 LVESLSLTVVDLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPL 360

Query: 161 S--EVTATACGADFTVWLSSVEGAS--ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
              +V + ACG+    W S++  +S  +   G   +G LGHG D E         LAY  
Sbjct: 361 EGLQVLSVACGS----WHSALTTSSGKLYTFGDGTFGVLGHG-DRE--------TLAY-- 405

Query: 217 QPRPRAIAALAGETIVKVACG----------TNHTVAVDSKGYVYTWGFGGYGRLGHREQ 266
              P+ + AL+G   +KVACG          TN T A      +YTWG G   RLGH ++
Sbjct: 406 ---PKEVEALSGFKTIKVACGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDK 462

Query: 267 KDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----GKLKNNGDDWMY 321
           +   VP+ V      +       ++ G   +   A  G+++       G+L N   D   
Sbjct: 463 EPRLVPKCVQALLEYDF----HQLACGHNMTVALATSGRVFTMGSSSNGQLGNPKSDGKQ 518

Query: 322 PKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVD 379
           P  + D L+   +  +  G  H   + + S   +WG    G LG+G    K    P  V+
Sbjct: 519 PCLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMGANGRLGHGDL--KDRKKPCLVE 576

Query: 380 ILEGMHVISVACGYGHSLVI 399
            L+  HV S++CG   +  I
Sbjct: 577 ALKDRHVKSISCGSNFTTCI 596



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/195 (29%), Positives = 89/195 (45%), Gaps = 16/195 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           P+ + +     + ++ACGT H      +G V+TWG    GRLGH    D   P+ V+   
Sbjct: 247 PKPLESDVVLDVNQIACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLS 306

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN------GDD---WMYPKPLMDLSG 330
              V     +IS G  ++      G L+ WG    N      G +   W+  K    L G
Sbjct: 307 LTVV----DLISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGPLEG 362

Query: 331 WNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G+ H  +   S  + ++G   +G LG+G   +++ A PK+V+ L G   I V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTFGVLGHG--DRETLAYPKEVEALSGFKTIKV 420

Query: 390 ACGYGHSLVIVDRTN 404
           ACG  HS  IV+ TN
Sbjct: 421 ACGIWHSAAIVEVTN 435


>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 743

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 163/355 (45%), Gaps = 38/355 (10%)

Query: 51  RPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY 110
           + L G + + +++G  S H +A+  +G  + WG N  GQLG+G       P  V  L   
Sbjct: 35  KELQGENFKVISSGAGSLHTLAIKDDGTVWAWGYNGFGQLGNGTYKDSCIPVRVKGLK-- 92

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
            +    AG  H++ + +DG+   +G   +GQ  S   R+   P  V+ L   + A A G 
Sbjct: 93  DVVAVSAGTFHSLALKKDGSVWIWGHTNYGQRKSDVYRDFTTPVKVKEL-KNIVAIAAGW 151

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
           DF+  L+     S+   G+  +G+LG G+                 +P    +     + 
Sbjct: 152 DFS--LAVGSDGSVWAWGINNHGELGIGS----------------LKPSAVPVKVKGLKD 193

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +V V+ G  H++A+   G V++WG+   G LG+R  +D  V   V V   ++V+     I
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWGYNEDGELGNRPTEDYTVSVPVRVKGLSDVIA----I 249

Query: 291 SAGSVNSSCTAGGGQLYMWGK--LKNNG--DDWMYPKPLMDLSGWNLRCMDSGNMHHFVG 346
           SAG  +S      G +++WG   ++ NG  D+   P  +  L+   +  + +G  H    
Sbjct: 250 SAGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLN--KVVAIAAGYRHSIAL 307

Query: 347 ADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVI 399
            D   +  WGH  YG LG    G+ S  + +    ++G+ +V++VA G  HS+ +
Sbjct: 308 KDDGTVWVWGHNSYGVLG-SNVGEHSFLLVQ----VKGLKNVVAVAAGRLHSVAL 357



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 145/330 (43%), Gaps = 56/330 (16%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           K G +   G+  +  +GR   +   NL  P +++ L  V    VA      H +A+  +G
Sbjct: 359 KNGTIWAWGNNAFGQLGRENNSFSLNL--PYKVKWLDNV----VAIATGGSHTLAIKRDG 412

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             ++WG N +GQLG+G       PT V  L+   + +AG+   H++ V +DG    +G+ 
Sbjct: 413 TVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEAGS--QHSLAVDKDGTVWVWGF- 469

Query: 138 KHGQLGSGSIRNEIEPSPVRC-LVSEVTATACGADF--------TVW------------- 175
                   + ++ + P P++   ++++T  A G D+         +W             
Sbjct: 470 IESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYILVLRKDGNIWGCGNDFYFRKFTD 529

Query: 176 -----------LSSVEGASILNAGLPQYGQLGHGTDNEY----NTKDSSVKLAYEAQPRP 220
                      L +++    + AG   +  L   TD       +T   + K       +P
Sbjct: 530 SSVSSVTKLIRLDNIKNVRSIAAG--YFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEKP 587

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
             I  L+G  +VKVA G  H++A+   G V++WG+  YG+LG+  ++  +VP RV     
Sbjct: 588 VKIKGLSG--VVKVAAGKYHSLALKKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGL-- 643

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           NNV+     I+AG  +S      G +++WG
Sbjct: 644 NNVVA----IAAGDYHSMALKKDGTVWVWG 669



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 162/400 (40%), Gaps = 73/400 (18%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L   D+  V+AG  + H +A+  +G  + WG    GQ      + RD  T V  
Sbjct: 85  PVRVKGLK--DVVAVSAG--TFHSLALKKDGSVWIWGHTNYGQ--RKSDVYRDFTTPVKV 138

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTAT 166
                I    AG   ++ V  DG+  A+G N HG+LG GS++    P  V+ L  +V A 
Sbjct: 139 KELKNIVAIAAGWDFSLAVGSDGSVWAWGINNHGELGIGSLKPSAVPVKVKGL-KDVVAV 197

Query: 167 ACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAAL 226
           + G   +  L+     ++ + G  + G+LG+       T+D +V +    +     IA  
Sbjct: 198 SAGLYHS--LALKRDGTVWSWGYNEDGELGNRP-----TEDYTVSVPVRVKGLSDVIAIS 250

Query: 227 AG---------------------------------------ETIVKVACGTNHTVAVDSK 247
           AG                                         +V +A G  H++A+   
Sbjct: 251 AGGFHSIALNKDGAVWIWGGGIIEKNGKIDNSYIPVRIRWLNKVVAIAAGYRHSIALKDD 310

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G V+ WG   YG LG    +  ++  +V   +  NV+     ++AG ++S      G ++
Sbjct: 311 GTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLK--NVVA----VAAGRLHSVALTKNGTIW 364

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG         +NN      P  +  L   N+  + +G  H   +  D +  SWG    
Sbjct: 365 AWGNNAFGQLGRENNSFSLNLPYKVKWLD--NVVAIATGGSHTLAIKRDGTVWSWGANNK 422

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G+LG G Y  KSS +P  V  L   + + V  G  HSL +
Sbjct: 423 GQLGNGTY--KSSYIPTCVKGLN--NAVLVEAGSQHSLAV 458



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 151/353 (42%), Gaps = 52/353 (14%)

Query: 61  VAAGCVSCHCVAVDVEGRCYTWGRNERGQLG-HGDKIQRDRPTIVSELSKYKIKKAGAGR 119
           VA      H VA+   G  + WG N  GQLG   +    + P  V  L    +     G 
Sbjct: 345 VAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN--VVAIATGG 402

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-------ATACGADF 172
           SHT+ +  DG   ++G N  GQLG+G+ ++   P+ V+ L + V        + A   D 
Sbjct: 403 SHTLAIKRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEAGSQHSLAVDKDG 462

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           TVW+               +G +     +E NTKD          P P  I  L    I 
Sbjct: 463 TVWV---------------WGFI-ESVWSEKNTKDI-------LSPLPIKIGKL--NDIT 497

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
           ++A G ++ + +   G +  WG G       R+  D  V     + + +N+    + I+A
Sbjct: 498 EIAGGLDYILVLRKDGNI--WGCGN--DFYFRKFTDSSVSSVTKLIRLDNIKNVRS-IAA 552

Query: 293 GSVNSSCTAGGGQLYMWGKLK-NNGDDWM----YPKPLMDLSGWNLRCMDSGNMHHF-VG 346
           G  +S      G ++ WG    +N   ++     P  +  LSG  +  + +G  H   + 
Sbjct: 553 GYFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEKPVKIKGLSG--VVKVAAGKYHSLALK 610

Query: 347 ADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
            D +  SWG+  YG+LG G   +++S +P +V  L   +V+++A G  HS+ +
Sbjct: 611 KDGTVWSWGYNAYGQLGNGT--RETSFVPVRVKGLN--NVVAIAAGDYHSMAL 659



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 108/275 (39%), Gaps = 89/275 (32%)

Query: 41  DGNLVSPTRLRPLVGV-DIRFVAAGCVSCHCVAVDVEGRCYTWGR----NERGQLGHGDK 95
           D ++ S T+L  L  + ++R +AAG    H +AV  +G  ++WG     N++  L   +K
Sbjct: 529 DSSVSSVTKLIRLDNIKNVRSIAAGY--FHSLAVRTDGTVWSWGDTNLDNKKKYLNFSEK 586

Query: 96  IQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSP 155
                P  +  LS   + K  AG+ H++ + +DG                          
Sbjct: 587 -----PVKIKGLSG--VVKVAAGKYHSLALKKDG-------------------------- 613

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
                            TVW          + G   YGQLG+GT               E
Sbjct: 614 -----------------TVW----------SWGYNAYGQLGNGTR--------------E 632

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
               P  +  L    +V +A G  H++A+   G V+ WG    G+LG R  +   VP +V
Sbjct: 633 TSFVPVRVKGL--NNVVAIAAGDYHSMALKKDGTVWVWGSNIRGQLGRRNIEFSTVPLKV 690

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
           +  + +NV+     I+AG  +S      G +++WG
Sbjct: 691 E--KLDNVVA----IAAGDTHSVALKKDGTVWVWG 719


>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
          Length = 4856

 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 144/332 (43%), Gaps = 70/332 (21%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3981 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 4037

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 4038 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 4096

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 4097 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 4142

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV   +                           Y  G+
Sbjct: 4143 TFGNGDYGRLGLGNTSNKKLPERVTALEG--------------------------YQIGQ 4176

Query: 312  LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF--VGADSSCI-SWGHAQYGELGYGPYG 368
             +N                 ++ C  +  ++H   V AD S + ++G   YG+LG G   
Sbjct: 4177 ARNK----------------SIICSVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGNST 4220

Query: 369  QKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
             KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 4221 AKSS--PQKVDVLCGIGIKKVACGTQFSVALT 4250



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 150/343 (43%), Gaps = 39/343 (11%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 4029 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 4085

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 4086 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 4145

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCL----------VSEVTATACGADFTVWLSSVEGASIL 185
               +G+LG G+  N+  P  V  L           S + + ACG + T+ +S+ +G+ + 
Sbjct: 4146 NGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVACGLNHTLAVSA-DGSMVW 4204

Query: 186  NAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVD 245
              G   YG+LG G                 A+  P+ +  L G  I KVACGT  +VA+ 
Sbjct: 4205 AFGDGDYGKLGLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALT 4250

Query: 246  SKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQ 305
              G VYT+G      L     ++   P++V V     +      ++ G+ ++      G 
Sbjct: 4251 KDGQVYTFGQDRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALTSTGD 4306

Query: 306  LYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            +Y WG          + +    P  +  L G N+R + +G  H
Sbjct: 4307 IYAWGSNSEGQLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 4349



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 469 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 528

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 529 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 586

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++++ S 
Sbjct: 587 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLSLTST 632

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 633 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 653

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 654 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 700

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  V+ G  HSL
Sbjct: 701 NSTGPITKPKKVSGLDGIAIQQVSAGTSHSL 731



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 21/213 (9%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 507 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 562

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C  
Sbjct: 563 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 622

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             +    +  G         Q    G G      + +++         RP+ I  LA   
Sbjct: 623 SQSSLSLTSTG---------QVYAWGCGACLGCGSSEATAL-------RPKLIEELAATR 666

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
           IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 667 IVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 699



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 118/275 (42%), Gaps = 25/275 (9%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 367 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 423

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 424 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 472

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 473 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 529

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 530 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 589

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             G+LG+G   +     PK ++ L+GM +  V  G
Sbjct: 590 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAG 622



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 4277 PQQVPVLAGVVIEDVAVGAE--HTLALTSTGDIYAWGSNSEGQLGLGHTNHVREPTLVTV 4334

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 4335 LQGKNVRQISAGRCHSAAWT 4354



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +++   G+ Y 
Sbjct: 580 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LSLTSTGQVYA 637

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 638 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 695

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 696 QCGQGN 701


>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
 gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
 gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
 gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
           mulatta]
          Length = 1057

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   I++VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + +I VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIIQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
          Length = 4409

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/333 (26%), Positives = 148/333 (44%), Gaps = 39/333 (11%)

Query: 17   EKGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSC-HCVAVDV 75
            +  G +L CG   +  +G  +G  D +L   T +  L G  +  +   C S  H +A+  
Sbjct: 3581 QANGTVLACGEGSYGRLG--QGNSD-DLHVLTVISALQGFVVTQLVTSCGSDGHSMALTE 3637

Query: 76   EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
             G  ++WG  + G+LGHG+  ++ RP  +  L   ++ +   G  H+ VVT DG    FG
Sbjct: 3638 SGEVFSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLFTFG 3697

Query: 136  WNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
               +G+LG G+  N+  P  V          ACG + T+ +S+ +G+ +   G   YG+L
Sbjct: 3698 NGDYGRLGLGNTSNKKLPERV----------ACGLNHTLAVSA-DGSMVWAFGDGDYGKL 3746

Query: 196  GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
            G G                 A+  P+ +  L G  I KVACGT  +VA+   G+VYT+G 
Sbjct: 3747 GLGNST--------------AKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQ 3792

Query: 256  GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN- 314
                 L     ++   P++V V     +      ++ G+ ++   A  G +Y WG     
Sbjct: 3793 DRLIGLPEGRARNHNRPQQVPVLAGVVI----EDVAVGAEHTLALASTGDVYAWGSNSEG 3848

Query: 315  -----NGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                 + +    P  +  L G N+R + +G  H
Sbjct: 3849 QLGLGHTNHVREPTLVTVLQGKNVRQISAGRCH 3881



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 136/331 (41%), Gaps = 70/331 (21%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +A   EG  ++WG  + G+LGHG+   +  P ++   L    +    AG  H+  VTE
Sbjct: 467 HTLAFTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTE 526

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG    +G    G+LG G   +   P+ V+  +S V   +CG+  T+ LS  +G ++ + 
Sbjct: 527 DGELYTWGEGDFGRLGHGDSNSRNIPTLVKD-ISNVGEVSCGSSHTIALSK-DGRTVWSF 584

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG  N                 +P+ I AL G  I KV  G+  ++A+ S 
Sbjct: 585 GGGDNGKLGHGDTNRVY--------------KPKVIEALQGMFIRKVCAGSQSSLALTST 630

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G VY WG G                               A +  GS  S  TA      
Sbjct: 631 GQVYAWGCG-------------------------------ACLGCGS--SEATA------ 651

Query: 308 MWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                       + PK + +L+   +  +  G+ H   +  D+   +WG+   G+ G G 
Sbjct: 652 ------------LRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQG- 698

Query: 367 YGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
                   PKKV  L+G+ +  ++ G  HSL
Sbjct: 699 NSTGPITKPKKVSGLDGIAIQQISAGTSHSL 729



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 38/274 (13%)

Query: 134  FGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
            +G  +HGQL     RN + P+      S+     CG + T  + +    ++L  G   YG
Sbjct: 3540 WGAGRHGQLAEAG-RNVMVPAAAPSF-SQAQQVICGQNCTFVIQA--NGTVLACGEGSYG 3595

Query: 194  QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV--ACGTN-HTVAVDSKGYV 250
            +LG G  ++ +                  I+AL G  + ++  +CG++ H++A+   G V
Sbjct: 3596 RLGQGNSDDLHVLT--------------VISALQGFVVTQLVTSCGSDGHSMALTESGEV 3641

Query: 251  YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
            ++WG G YG+LGH     +  PR+++  Q   V+     +S G  +S+     G+L+ +G
Sbjct: 3642 FSWGDGDYGKLGHGNSDRQRRPRQIEALQGEEVVQ----MSCGFKHSAVVTSDGKLFTFG 3697

Query: 311  KLKNNGDDWMYPKP-LMDLSGWNLRCMDSGNMHHF--VGADSSCI-SWGHAQYGELGYGP 366
                NGD   Y +  L + S   L    +  ++H   V AD S + ++G   YG+LG G 
Sbjct: 3698 ----NGD---YGRLGLGNTSNKKLPERVACGLNHTLAVSADGSMVWAFGDGDYGKLGLGN 3750

Query: 367  YGQKSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
               KSS  P+KVD+L G+ +  VACG   S+ + 
Sbjct: 3751 STAKSS--PQKVDVLCGIGIKKVACGTQFSVALT 3782



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 90/337 (26%), Positives = 151/337 (44%), Gaps = 38/337 (11%)

Query: 77   GRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
            G+C  Y WG    GQL       R+     +  S  + ++   G++ T V+  +G  LA 
Sbjct: 3533 GKCDVYLWGAGRHGQLAEAG---RNVMVPAAAPSFSQAQQVICGQNCTFVIQANGTVLAC 3589

Query: 135  GWNKHGQLGSGS---IRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQ 191
            G   +G+LG G+   +      S ++  V     T+CG+D    ++  E   + + G   
Sbjct: 3590 GEGSYGRLGQGNSDDLHVLTVISALQGFVVTQLVTSCGSDGHS-MALTESGEVFSWGDGD 3648

Query: 192  YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            YG+LGHG  +               Q RPR I AL GE +V+++CG  H+  V S G ++
Sbjct: 3649 YGKLGHGNSDR--------------QRRPRQIEALQGEEVVQMSCGFKHSAVVTSDGKLF 3694

Query: 252  TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
            T+G G YGRLG     ++ +P RV     + +    AV + GS+  +   G      +GK
Sbjct: 3695 TFGNGDYGRLGLGNTSNKKLPERVACGLNHTL----AVSADGSMVWAFGDGD-----YGK 3745

Query: 312  L-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQ 369
            L   N      P+ +  L G  ++ +  G      +  D    ++G  +   L   P G+
Sbjct: 3746 LGLGNSTAKSSPQKVDVLCGIGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL---PEGR 3802

Query: 370  -KSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             ++   P++V +L G+ +  VA G  H+L +    +V
Sbjct: 3803 ARNHNRPQQVPVLAGVVIEDVAVGAEHTLALASTGDV 3839



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 97/214 (45%), Gaps = 23/214 (10%)

Query: 52  PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK 111
           PL G  +  V+AG    H  AV  +G  YTWG  + G+LGHGD   R+ PT+V ++S   
Sbjct: 505 PLQGKVVVCVSAGYR--HSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDIS--N 560

Query: 112 IKKAGAGRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATAC-G 169
           + +   G SHT+ +++DG ++ +FG   +G+LG G      +P  +  L        C G
Sbjct: 561 VGEVSCGSSHTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAG 620

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
           +  ++ L+S         G      LG G+                   RP+ I  LA  
Sbjct: 621 SQSSLALTSTGQVYAWGCG----ACLGCGSSEATAL-------------RPKLIEELAAT 663

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
            IV ++ G +H +A+     VY WG    G+ G 
Sbjct: 664 RIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQ 697



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 25/288 (8%)

Query: 124 VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGAS 183
           +V+E      +G N   QL  G+    ++P          T  A    +  ++ S +G S
Sbjct: 365 IVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVISTDG-S 421

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G   YG+LG G  N  +T     KL +E     + +++  G           HT+A
Sbjct: 422 VRACGKGSYGRLGLGDSNNQSTLK---KLTFEPHRSIKKVSSSKG--------SDGHTLA 470

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
             ++G V++WG G YG+LGH     +  P+ +    +  V+     +SAG  +S+     
Sbjct: 471 FTTEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVV---VCVSAGYRHSAAVTED 527

Query: 304 GQLYMWGK----LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCI-SWGHA 357
           G+LY WG+       +GD      P +     N+  +  G+ H   +  D   + S+G  
Sbjct: 528 GELYTWGEGDFGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGG 587

Query: 358 QYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             G+LG+G   +     PK ++ L+GM +  V  G   SL +     V
Sbjct: 588 DNGKLGHGDTNRVYK--PKVIEALQGMFIRKVCAGSQSSLALTSTGQV 633



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 47   PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
            P ++  L GV I  VA G    H +A+   G  Y WG N  GQLG G       PT+V+ 
Sbjct: 3809 PQQVPVLAGVVIEDVAVGAE--HTLALASTGDVYAWGSNSEGQLGLGHTNHVREPTLVTV 3866

Query: 107  LSKYKIKKAGAGRSHTVVVT 126
            L    +++  AGR H+   T
Sbjct: 3867 LQGKNVRQISAGRCHSAAWT 3886



 Score = 45.1 bits (105), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 26  GSTCWDAVGRRKGAL---DGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYT 81
           G T W   G   G L   D N V  P  +  L G+ IR V AG  S   +A+   G+ Y 
Sbjct: 578 GRTVWSFGGGDNGKLGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSS--LALTSTGQVYA 635

Query: 82  WGRNERGQLGHGD-KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG      LG G  +    RP ++ EL+  +I     G SH + ++ D    A+G N  G
Sbjct: 636 WGCG--ACLGCGSSEATALRPKLIEELAATRIVDISIGDSHCLALSHDNEVYAWGNNSMG 693

Query: 141 QLGSGS 146
           Q G G+
Sbjct: 694 QCGQGN 699


>gi|30678939|ref|NP_187029.2| ankyrin repeat and regulator of chromosome condensation (RCC1)
           domain-containing protein [Arabidopsis thaliana]
 gi|332640472|gb|AEE73993.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
           domain-containing protein [Arabidopsis thaliana]
          Length = 1078

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
           P R+  L G  I+ V+A     H VA+   G  YTWG    G+LGH       G      
Sbjct: 174 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 231

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
              ++S L   ++K   A + HTV+ TE G+   +G N+ GQLG  S+  +  P  V  L
Sbjct: 232 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 291

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +++ A +     T  +S  +   +   G  + GQLG+GT N  +               
Sbjct: 292 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 337

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+    +A    HT+ + + G VYTW        GHR       PRRV +  
Sbjct: 338 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHR----LVTPRRVIISR 385

Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
                      F R   L   A I+AG V+S   A  G  + W                 
Sbjct: 386 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 429

Query: 327 DLSGWNLRCMDSGNMH 342
             S  NLRC    ++H
Sbjct: 430 --SDSNLRCQQLHSLH 443



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 29/202 (14%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           Q  P  + +L G  I  V+    H+VA+ + G VYTWGFG  GRLGH E          D
Sbjct: 171 QKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------FD 221

Query: 277 VFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGDD 318
           +   +  V+ P  VIS           A   ++     GG +Y WG  +       + D 
Sbjct: 222 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 281

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P+ +  L    +  + + N H  V +D     +WG  + G+LGYG     S+  P+ 
Sbjct: 282 QATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRL 340

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           VD L+G    ++A    H+LV+
Sbjct: 341 VDYLKGKVFTAIASSKYHTLVL 362



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 100/242 (41%), Gaps = 31/242 (12%)

Query: 79  CYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNK 138
            ++WG     QLG G++  +  P  V  L    IK   A + H+V ++  G    +G+ +
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGR 211

Query: 139 HGQLGSGSIRNEIEPSPV---RCLVS-----EVTATACGADFTVWLSSVEGASILNAGLP 190
            G+LG          + V   R ++S      V A A     TV   + EG  +   G  
Sbjct: 212 GGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYTWGSN 269

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           + GQLG+ +               + Q  PR + +L  + IV V+    HT  V   G V
Sbjct: 270 REGQLGYTS--------------VDTQATPRKVTSLKAK-IVAVSAANKHTAVVSDCGEV 314

Query: 251 YTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM 308
           +TWG    G+LG+        + PR VD + +  V      I++   ++      G++Y 
Sbjct: 315 FTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDGEVYT 370

Query: 309 WG 310
           WG
Sbjct: 371 WG 372



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++WG G   +LG   Q  + VP RVD      +     ++SA   +S   +  G++Y W
Sbjct: 152 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 207

Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
           G          +   +        P   +SG   R +   +   HH V A       +WG
Sbjct: 208 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 267

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             + G+LGY      + A P+KV  L+   +++V+    H+ V+ D
Sbjct: 268 SNREGQLGYTSVD--TQATPRKVTSLKA-KIVAVSAANKHTAVVSD 310


>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Papio anubis]
          Length = 1057

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIIQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   I++VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIIQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGTDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + +I VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIIQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 14/186 (7%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 154 KGGELFAWGQNLHGQLG--VGRTFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 210 NIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 270 KHGQLGHNSTQNELRP----CLVAELVGNRVTQIACGRWHTLAYVSDFG-KVFSFGSGKD 324

Query: 193 GQLGHG 198
           GQLG+G
Sbjct: 325 GQLGNG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G        P IV  L+   + +  A
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISA 197

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++  PS +  L ++ V   ACG   +  L
Sbjct: 198 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 258 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGNRVTQIA 300

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+    D+ +P  V V   +  L  E+  S   
Sbjct: 301 CGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV-SSSEELKLESHTSEKE 359

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 360 L--IMIAGGNQSILLWIKKENS 379



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G +  +   P  V  L    
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP 191

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  ++GQLG G      +KDS           P  I
Sbjct: 192 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGLG---HTESKDS-----------PSLI 236

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            AL  + +  +ACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 285



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R+ + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R       P+ V+   
Sbjct: 129 RSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLA 188

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G +Y WGK +       + +    P  +  L    +
Sbjct: 189 G----VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +ACG
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGNRVTQIACG 302

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 303 RWHTLAYV 310


>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
           [Pan troglodytes]
          Length = 979

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
           [Pan paniscus]
          Length = 979

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------CK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.2 bits (108), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
 gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
          Length = 1719

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 75/317 (23%), Positives = 128/317 (40%), Gaps = 49/317 (15%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELS---KYKIKK 114
           + F++ G +  H   +  +G  YTWG    G+LGHG       P +V         ++  
Sbjct: 163 VVFISTGAI--HTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVS 220

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTV 174
              G  HTV +T  GN  +FG N   QLG G+I +    +P         + +     + 
Sbjct: 221 VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSP 280

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            + S   +++ N                   + SS K+                + I+K+
Sbjct: 281 IIMSNSTSTLFNK----------------QQQQSSNKI----------------DRIIKL 308

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           +C TN + A+   GY+YTWG G  GRLGH +   +  P++V     + ++     +S G 
Sbjct: 309 SCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVD----MSLGG 364

Query: 295 VNSSCTAGGGQLYMWGKLKNN-------GDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VG 346
            +S      G+++ WG+ +N            M PK +       ++ + +G  H   + 
Sbjct: 365 GHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAID 424

Query: 347 ADSSCISWGHAQYGELG 363
            + S  +WG   YG LG
Sbjct: 425 TNGSMFAWGRGDYGVLG 441



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 61/241 (25%), Positives = 113/241 (46%), Gaps = 9/241 (3%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R +   C +    A+   G  YTWGR + G+LGHGD + +  P  V  L  + I     G
Sbjct: 304 RIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVDMSLG 363

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN-EIEPSPVRCLVSE-VTATACGADFTVWL 176
             H++ +T+ G   ++G  ++GQLG G+  + ++ P  ++   ++ +   + G   ++ +
Sbjct: 364 GGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKTIKVISAGGYHSIAI 423

Query: 177 SSVEGASILNAGLPQYGQLGHGT--DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            +    S+   G   YG LG  +  D+  +     +  +           + AGE  + V
Sbjct: 424 DT--NGSMFAWGRGDYGVLGVSSSLDSLGDINSPVLIKSLNNSNGSNNSNSSAGERFINV 481

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           + G  H VA    G +Y+WG G   RLG   ++++ +P++++   R+N   P A  S G 
Sbjct: 482 SSGFQHNVAQTENGDLYSWGCGSGNRLGLANEENQLIPKKLN--DRSNNSKP-AFFSCGE 538

Query: 295 V 295
           +
Sbjct: 539 I 539



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 61/245 (24%), Positives = 98/245 (40%), Gaps = 50/245 (20%)

Query: 193 GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
           G+LGHGT   Y+  +  +   +E +P  R         +V VA G  HTVA+   G VY+
Sbjct: 191 GKLGHGTLESYS--EPRLVEFFETKPSLR---------VVSVANGGKHTVALTVCGNVYS 239

Query: 253 WGFGGYGRLGHREQKDEW--VPRRVD------------------------VF-----QRN 281
           +G     +LG       +   P+ V                         +F     Q +
Sbjct: 240 FGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSS 299

Query: 282 NVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN----NGDDWMY--PKPLMDLSGWNLRC 335
           N +     +S  +  S+  +  G LY WG+  N    +GD  M   PK +M L G  +  
Sbjct: 300 NKIDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHTIVD 359

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYG 394
           M  G  H   +       SWG  + G+LG+G +  +    PK++   +   +  ++ G  
Sbjct: 360 MSLGGGHSMALTKRGEVFSWGRGENGQLGHGTFTSQQMT-PKQIQAFQNKTIKVISAGGY 418

Query: 395 HSLVI 399
           HS+ I
Sbjct: 419 HSIAI 423



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 55/220 (25%), Positives = 84/220 (38%), Gaps = 47/220 (21%)

Query: 229 ETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           E +V ++ G  HT  +  KG++YTWG G  G+LGH   +    PR V+ F+    L   +
Sbjct: 161 EKVVFISTGAIHTSIITDKGHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLRVVS 220

Query: 289 VISAGSV---------------NSSCTAGGG----------QLYMWGK------------ 311
           V + G                 N SC  G G          QL  +              
Sbjct: 221 VANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNSSSP 280

Query: 312 -LKNNGDDWMYPKPLMDLSG-----WNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYG 365
            + +N    ++ K     S        L C  S N    +       +WG    G LG+G
Sbjct: 281 IIMSNSTSTLFNKQQQQSSNKIDRIIKLSC--STNRSAAISKLGYLYTWGRGDNGRLGHG 338

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               +S+  PK+V  L G  ++ ++ G GHS+ +  R  V
Sbjct: 339 DSLMQST--PKQVMSLHGHTIVDMSLGGGHSMALTKRGEV 376


>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
           [Bos taurus]
          Length = 425

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/240 (30%), Positives = 112/240 (46%), Gaps = 22/240 (9%)

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPT-IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG 135
           G  Y WG N   QLG+G   Q   P  + + L   ++ +   G  H++ +  DG   A+G
Sbjct: 1   GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWG 60

Query: 136 WNKHGQLGSGSIRNEIEPSPV-RCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYG 193
           +N  GQ+GSGS  N+  P  V  CL +  V   ACG   T  ++ ++   +   G    G
Sbjct: 61  YNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQ--TSSMAVLDNGEVYGWGYNGNG 118

Query: 194 QLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           QLG G +                Q  P  +AAL    + ++ CG  HT+A+  +G +Y W
Sbjct: 119 QLGLGNNGN--------------QLTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAW 164

Query: 254 GFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
           G   YG+LG   + +   P  + V ++  V+   A  SA +  S+    GG +YMWG+ +
Sbjct: 165 GANTYGQLGTGNKNNLLSPAHIMV-EKERVIEIAACHSAHT--SAAKTQGGHVYMWGQCR 221



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 91/200 (45%), Gaps = 21/200 (10%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE-LSKYKIKKAGA 117
           + V   C S H +A+  +G  + WG N  GQ+G G    +  P  V+  L   ++     
Sbjct: 36  QVVEVACGSHHSMALAADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIAC 95

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G++ ++ V ++G    +G+N +GQLG G+  N++ P  V  L S  V    CG   T+ L
Sbjct: 96  GQTSSMAVLDNGEVYGWGYNGNGQLGLGNNGNQLTPVRVAALHSVCVNQIVCGYAHTLAL 155

Query: 177 SSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  EG  +L A G   YGQLG G  N   +              P  I       I   A
Sbjct: 156 TD-EG--LLYAWGANTYGQLGTGNKNNLLS--------------PAHIMVEKERVIEIAA 198

Query: 236 CGTNHTVAVDSK-GYVYTWG 254
           C + HT A  ++ G+VY WG
Sbjct: 199 CHSAHTSAAKTQGGHVYMWG 218



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 33/216 (15%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           Y QLG+GT N+                  +    L  + +V+VACG++H++A+ + G V+
Sbjct: 11  YSQLGNGTTNQ-------------GLAPIQVCTNLLIKQVVEVACGSHHSMALAADGEVF 57

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQLYMW 309
            WG+   G++G     ++  PR+V      N L  + V  I+ G  +S      G++Y W
Sbjct: 58  AWGYNNCGQVGSGSTANQPTPRKV-----TNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 112

Query: 310 GK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGE 361
           G        L NNG+  + P  +  L    +  +  G  H     D   + +WG   YG+
Sbjct: 113 GYNGNGQLGLGNNGNQ-LTPVRVAALHSVCVNQIVCGYAHTLALTDEGLLYAWGANTYGQ 171

Query: 362 LGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
           LG    G K++ +     ++E   VI + AC   H+
Sbjct: 172 LG---TGNKNNLLSPAHIMVEKERVIEIAACHSAHT 204



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 2/89 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P R+  L  V +  +   C   H +A+  EG  Y WG N  GQLG G+K     
Sbjct: 125 NGNQLTPVRVAALHSVCVNQIV--CGYAHTLALTDEGLLYAWGANTYGQLGTGNKNNLLS 182

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDG 129
           P  +    +  I+ A    +HT      G
Sbjct: 183 PAHIMVEKERVIEIAACHSAHTSAAKTQG 211


>gi|42572237|ref|NP_974213.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
           domain-containing protein [Arabidopsis thaliana]
 gi|332640471|gb|AEE73992.1| ankyrin repeat and regulator of chromosome condensation (RCC1)
           domain-containing protein [Arabidopsis thaliana]
          Length = 1081

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 88/316 (27%), Positives = 126/316 (39%), Gaps = 66/316 (20%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-------GDKIQRD 99
           P R+  L G  I+ V+A     H VA+   G  YTWG    G+LGH       G      
Sbjct: 177 PGRVDSLHGCFIKLVSAA--KFHSVAISTHGEVYTWGFGRGGRLGHPEFDIHSGQAAVIT 234

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
              ++S L   ++K   A + HTV+ TE G+   +G N+ GQLG  S+  +  P  V  L
Sbjct: 235 PRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDTQATPRKVTSL 294

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            +++ A +     T  +S  +   +   G  + GQLG+GT N  +               
Sbjct: 295 KAKIVAVSAANKHTAVVS--DCGEVFTWGCNKEGQLGYGTSNSASNYS------------ 340

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           PR +  L G+    +A    HT+ + + G VYTW        GHR       PRRV +  
Sbjct: 341 PRLVDYLKGKVFTAIASSKYHTLVLRNDGEVYTW--------GHR----LVTPRRVIISR 388

Query: 278 -----------FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLM 326
                      F R   L   A I+AG V+S   A  G  + W                 
Sbjct: 389 NLKKAGNTLLNFHRRRPLRLTA-IAAGMVHSLALAEDGAFFYWVS--------------- 432

Query: 327 DLSGWNLRCMDSGNMH 342
             S  NLRC    ++H
Sbjct: 433 --SDSNLRCQQLHSLH 446



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 89/202 (44%), Gaps = 29/202 (14%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
           Q  P  + +L G  I  V+    H+VA+ + G VYTWGFG  GRLGH E          D
Sbjct: 174 QKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTWGFGRGGRLGHPE---------FD 224

Query: 277 VFQ-RNNVLPPEAVIS-----------AGSVNSSCTAGGGQLYMWGKLK------NNGDD 318
           +   +  V+ P  VIS           A   ++     GG +Y WG  +       + D 
Sbjct: 225 IHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWGSNREGQLGYTSVDT 284

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKK 377
              P+ +  L    +  + + N H  V +D     +WG  + G+LGYG     S+  P+ 
Sbjct: 285 QATPRKVTSLKA-KIVAVSAANKHTAVVSDCGEVFTWGCNKEGQLGYGTSNSASNYSPRL 343

Query: 378 VDILEGMHVISVACGYGHSLVI 399
           VD L+G    ++A    H+LV+
Sbjct: 344 VDYLKGKVFTAIASSKYHTLVL 365



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 65/246 (26%), Positives = 102/246 (41%), Gaps = 31/246 (12%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G++  +  P  V  L    IK   A + H+V ++  G    +
Sbjct: 151 VATEVFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFIKLVSAAKFHSVAISTHGEVYTW 210

Query: 135 GWNKHGQLGSGSIRNEIEPSPV---RCLVS-----EVTATACGADFTVWLSSVEGASILN 186
           G+ + G+LG          + V   R ++S      V A A     TV   + EG  +  
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVI--ATEGGDVYT 268

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + GQLG      Y + D+        Q  PR + +L  + IV V+    HT  V  
Sbjct: 269 WGSNREGQLG------YTSVDT--------QATPRKVTSLKAK-IVAVSAANKHTAVVSD 313

Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            G V+TWG    G+LG+        + PR VD + +  V      I++   ++      G
Sbjct: 314 CGEVFTWGCNKEGQLGYGTSNSASNYSPRLVD-YLKGKVF---TAIASSKYHTLVLRNDG 369

Query: 305 QLYMWG 310
           ++Y WG
Sbjct: 370 EVYTWG 375



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 21/166 (12%)

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V++WG G   +LG   Q  + VP RVD      +     ++SA   +S   +  G++Y W
Sbjct: 155 VFSWGNGANYQLGTGNQHVQKVPGRVDSLHGCFI----KLVSAAKFHSVAISTHGEVYTW 210

Query: 310 G----------KLKNNGDDWMYPKPLMDLSGWNLRCMD--SGNMHHFVGADS--SCISWG 355
           G          +   +        P   +SG   R +   +   HH V A       +WG
Sbjct: 211 GFGRGGRLGHPEFDIHSGQAAVITPRQVISGLGSRRVKAVAAAKHHTVIATEGGDVYTWG 270

Query: 356 HAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             + G+LGY      + A P+KV  L+   +++V+    H+ V+ D
Sbjct: 271 SNREGQLGYTSVD--TQATPRKVTSLKA-KIVAVSAANKHTAVVSD 313


>gi|47226892|emb|CAG05784.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 557

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 34/254 (13%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS-ELSKYKIKKAGAGRSHTVVVTE 127
           H +    +G  + WG N   QLG+G   Q   P +VS  L   K+ +   G  H++ +T+
Sbjct: 101 HILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVACGSHHSMALTD 160

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVR---CLVSEVTAT-ACGADFTVWLSSVEGAS 183
            G   A+G+N  GQ+GSGS  N  +P+P R   CL + V  +  CG   T  L+ V+   
Sbjct: 161 SGEVYAWGYNNCGQVGSGSTAN--QPTPRRVSSCLQNRVAVSIVCGQ--TSSLAVVDNGE 216

Query: 184 ILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVA 243
           +   G    GQLG G +                Q  P  + AL G  + ++  G  H++A
Sbjct: 217 VYGWGYNGNGQLGLGNNGN--------------QLTPCRLVALQGLCVQQIVSGYAHSLA 262

Query: 244 VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
           +  +G +Y WG   YG+LG   + ++  P ++       +   E ++   + +S+ T+  
Sbjct: 263 LTDEGLLYAWGANTYGQLGTGNKSNQLSPVQI-------MTEKERIVEIAACHSTHTSAA 315

Query: 304 ----GQLYMWGKLK 313
               GQ+YMWG+ +
Sbjct: 316 KTQSGQVYMWGQCR 329



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 135/299 (45%), Gaps = 36/299 (12%)

Query: 112 IKKA---GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATA 167
           I+KA   G   +  + +T D    A G N    LG+G  ++ I P  V  L   +V + +
Sbjct: 36  IRKACVFGTSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVSLS 95

Query: 168 CGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA-L 226
            G+   + L++ +G  +   G   Y QLG+GT N+                 P  ++A L
Sbjct: 96  YGSGPHILLATEDG-ELFAWGHNGYSQLGNGTTNQ--------------GVAPVLVSANL 140

Query: 227 AGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPP 286
             + + +VACG++H++A+   G VY WG+   G++G     ++  PRRV    +N V   
Sbjct: 141 LNKKVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRV--- 197

Query: 287 EAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
              I  G  +S      G++Y WG        L NNG+  + P  L+ L G  ++ + SG
Sbjct: 198 AVSIVCGQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQ-LTPCRLVALQGLCVQQIVSG 256

Query: 340 NMHHFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV-ACGYGHS 396
             H     D   + +WG   YG+LG    G KS+ +     + E   ++ + AC   H+
Sbjct: 257 YAHSLALTDEGLLYAWGANTYGQLG---TGNKSNQLSPVQIMTEKERIVEIAACHSTHT 312



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 92/199 (46%), Gaps = 19/199 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA-GA 117
           +     C S H +A+   G  Y WG N  GQ+G G    +  P  VS   + ++  +   
Sbjct: 144 KVTEVACGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPTPRRVSSCLQNRVAVSIVC 203

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G++ ++ V ++G    +G+N +GQLG G+  N++ P  +  L   +      + +   L+
Sbjct: 204 GQTSSLAVVDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLVAL-QGLCVQQIVSGYAHSLA 262

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV-AC 236
             +   +   G   YGQLG G  N+ N + S V++  E             E IV++ AC
Sbjct: 263 LTDEGLLYAWGANTYGQLGTG--NKSN-QLSPVQIMTEK------------ERIVEIAAC 307

Query: 237 GTNHTVAVDSK-GYVYTWG 254
            + HT A  ++ G VY WG
Sbjct: 308 HSTHTSAAKTQSGQVYMWG 326



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 2/82 (2%)

Query: 41  DGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR 100
           +GN ++P RL  L G+ ++ + +G    H +A+  EG  Y WG N  GQLG G+K  +  
Sbjct: 233 NGNQLTPCRLVALQGLCVQQIVSG--YAHSLALTDEGLLYAWGANTYGQLGTGNKSNQLS 290

Query: 101 PTIVSELSKYKIKKAGAGRSHT 122
           P  +    +  ++ A    +HT
Sbjct: 291 PVQIMTEKERIVEIAACHSTHT 312



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 20/190 (10%)

Query: 230 TIVKVAC----GTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLP 285
           + ++ AC      N  + + +   VY  G      LG  + +   VP++VD+     V+ 
Sbjct: 34  STIRKACVFGTSANEAIYITADDEVYALGLNCSNCLGTGDSQSSIVPKKVDILSGRKVVS 93

Query: 286 PEAVISAGSVNSSCTAG-GGQLYMWG-----KLKNNGDDWMYPKPLMDLSGWNLRCMD-- 337
               +S GS      A   G+L+ WG     +L N   +      L+  +  N +  +  
Sbjct: 94  ----LSYGSGPHILLATEDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKKVTEVA 149

Query: 338 SGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGH 395
            G+ H     DS    +WG+   G++G G    + +  P++V   L+    +S+ CG   
Sbjct: 150 CGSHHSMALTDSGEVYAWGYNNCGQVGSGSTANQPT--PRRVSSCLQNRVAVSIVCGQTS 207

Query: 396 SLVIVDRTNV 405
           SL +VD   V
Sbjct: 208 SLAVVDNGEV 217


>gi|449448608|ref|XP_004142058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cucumis
           sativus]
          Length = 485

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 120/258 (46%), Gaps = 45/258 (17%)

Query: 55  GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ----------------- 97
           GV I  VAAG    H +A+   G+ + WG    GQLG G +++                 
Sbjct: 228 GVKIAAVAAG--GRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVSSPHIIPCIELPASA 285

Query: 98  RDRPTIVSELSKYK--------IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRN 149
           +DR +++ + SK          +K    G  H+VVVT+ G  L FGW  +GQ G G+  +
Sbjct: 286 KDRSSVIYQASKAAAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTND 345

Query: 150 EIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDS 208
            + P+ V  L S +V + + G   TV +++ EG  +   G  Q+GQLG GTD        
Sbjct: 346 LLRPTCVSSLSSTQVESISAGLWHTVCITA-EGL-VYAFGGNQFGQLGTGTDQG------ 397

Query: 209 SVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD 268
                 E  PR      L G+   +V+CG  H V +   G +++WG+  YG+LG  +  D
Sbjct: 398 ------ETIPRLLDAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSID 451

Query: 269 EWVPRRVDV---FQRNNV 283
             +P +V +     RN V
Sbjct: 452 RNIPSKVSIDGCLPRNIV 469



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 81/319 (25%), Positives = 128/319 (40%), Gaps = 60/319 (18%)

Query: 93  GDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEI 151
           GD +    P +V+     KI    AG  HT+ +++ G    +G    GQLG G+ ++   
Sbjct: 212 GDDLFTTLPCLVNFGPGVKIAAVAAGGRHTLALSDMGQVWGWGHGGEGQLGLGTRVKMVS 271

Query: 152 EPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVK 211
            P  + C+  E+ A+A                                      KD S  
Sbjct: 272 SPHIIPCI--ELPASA--------------------------------------KDRS-S 290

Query: 212 LAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWV 271
           + Y+A     A   + G  +  +ACG  H+V V   G + T+G+G YG+ G     D   
Sbjct: 291 VIYQASKA--AAGKVLGNYVKGIACGGRHSVVVTDTGALLTFGWGLYGQCGQGNTNDLLR 348

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLM 326
           P  V       V      ISAG  ++ C    G +Y      +G+L    D       L+
Sbjct: 349 PTCVSSLSSTQV----ESISAGLWHTVCITAEGLVYAFGGNQFGQLGTGTDQGETIPRLL 404

Query: 327 D---LSGWNLRCMDSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
           D   L G   + +  G  H+ V  D     SWG  +YG+LG G    ++  +P KV I +
Sbjct: 405 DAPILEGKCAKRVSCGARHNVVLTDDGQLFSWGWNKYGQLGLGDSIDRN--IPSKVSI-D 461

Query: 383 GMHVISVACGYGHSLVIVD 401
           G    ++ CG+ H+L++ +
Sbjct: 462 GCLPRNIVCGWWHTLMLAE 480


>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
          Length = 1023

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 97/186 (52%), Gaps = 14/186 (7%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 154 KGGELFAWGQNLHGQLG--VGRTFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 209

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 210 NIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALLTQDGLLFTFGAG 269

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 270 KHGQLGHNSTQNELRP----CLVAELVGNRVTQIACGRWHTLAYVSDFG-KVFSFGSGKD 324

Query: 193 GQLGHG 198
           GQLG+G
Sbjct: 325 GQLGNG 330



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G        P IV  L+   + +  A
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVPLAQISA 197

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++  PS +  L ++ V   ACG   +  L
Sbjct: 198 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKVEFLACGGSHSALL 257

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 258 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGNRVTQIA 300

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+    D+ +P  V V   +  L  E+  S   
Sbjct: 301 CGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPVKV-SSSEELKLESHTSEKE 359

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 360 L--IMIAGGNQSILLWIKKENS 379



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 80/169 (47%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G +  +   P  V  L    
Sbjct: 132 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLAGVP 191

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  ++GQLG G      +KDS           P  I
Sbjct: 192 LAQISAGEAHSMALSMSG-NIYSWGKNEFGQLGLG---HTESKDS-----------PSLI 236

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
            AL  + +  +ACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 237 EALDNQKVEFLACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 285



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R+ + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R       P+ V+   
Sbjct: 129 RSESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRTFPSTTTPQIVEHLA 188

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G +Y WGK +       + +    P  +  L    +
Sbjct: 189 G----VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDSPSLIEALDNQKV 244

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +ACG
Sbjct: 245 EFLACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGNRVTQIACG 302

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 303 RWHTLAYV 310


>gi|357463177|ref|XP_003601870.1| RCC1 domain-containing protein [Medicago truncatula]
 gi|355490918|gb|AES72121.1| RCC1 domain-containing protein [Medicago truncatula]
          Length = 432

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 154/366 (42%), Gaps = 82/366 (22%)

Query: 58  IRFVAAGCVSC------------HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +R++ AG   C            H +AV  +G  Y++G N  GQLGHG   +  RP  + 
Sbjct: 31  LRYLLAGEACCRREKSQAIAGPGHSIAVTSKGDVYSFGSNSSGQLGHGTTEEEWRPKPIR 90

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL---GSGSIRNEIEPSPVRCLVSE 162
            L   +I +A AG   T+++T+ G   AFG +  G+    G GS +  I P  V  L + 
Sbjct: 91  TLQGIRIIQAAAGAGRTMLITDSGQVYAFGKDSFGEAEYGGQGS-KTVIAPRLVESLKNI 149

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
               A   +F   + S EG  +        G+LGH TD+             + +P P  
Sbjct: 150 FVVQAAIGNFFTAVLSREG-RVYTFSWGSDGKLGHHTDSN------------DMEPHP-L 195

Query: 223 IAALAGETIVKVACGTNHTVAV---DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQ 279
           + AL    +V++A G  + + +    S   VY+ G G  G+LGH  + DE  PR ++ FQ
Sbjct: 196 LGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQ 255

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSG 339
             N+ P   VISAG+ +++     G++  WG                             
Sbjct: 256 TLNLQP--MVISAGAWHAAVVGRDGRVCTWG----------------------------- 284

Query: 340 NMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
                         WG  +YG LG+G   ++  A PK VD L  +  + VA G   + V+
Sbjct: 285 --------------WG--RYGCLGHG--NEECEAAPKVVDALTNVKAVHVATGDYTTFVV 326

Query: 400 VDRTNV 405
            +  +V
Sbjct: 327 AEDGDV 332



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 111/295 (37%), Gaps = 53/295 (17%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD--RPTIV 104
           P  +R L G+ I   AAG  +   + +   G+ Y +G++  G+  +G +  +    P +V
Sbjct: 86  PKPIRTLQGIRIIQAAAG--AGRTMLITDSGQVYAFGKDSFGEAEYGGQGSKTVIAPRLV 143

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT 164
             L    + +A  G   T V++ +G    F W   G+LG  +  N++EP P+   + ++ 
Sbjct: 144 ESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSDGKLGHHTDSNDMEPHPLLGALEDIP 203

Query: 165 ATACGADFTVWLSSV---EGASILNAGLPQYGQLGHGTDN---------EYNTKDSSVKL 212
                A +   L       G S+ + G    G+LGHGT           ++ T +    +
Sbjct: 204 VVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMV 263

Query: 213 AY-------------------------------EAQPRPRAIAALAGETIVKVACGTNHT 241
                                            E +  P+ + AL     V VA G   T
Sbjct: 264 ISAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECEAAPKVVDALTNVKAVHVATGDYTT 323

Query: 242 VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVN 296
             V   G VY++G G    LGH    D    R        NVL PE V S   +N
Sbjct: 324 FVVAEDGDVYSFGCGESASLGHNAVIDAEGNRHA------NVLNPELVTSLKQIN 372



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 112/267 (41%), Gaps = 31/267 (11%)

Query: 30  WDAVGRRKGALDGNLVSPTRLRPLVG----VDIRFVAAGCVSCHCVAVDVEG-RCYTWGR 84
           W + G+     D N + P    PL+G    + +  +AAG     C+A    G   Y+ G 
Sbjct: 175 WGSDGKLGHHTDSNDMEP---HPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGC 231

Query: 85  NERGQLGHGDKIQRDRPTIVSELSKYKIKKA--GAGRSHTVVVTEDGNSLAFGWNKHGQL 142
              G+LGHG +     P ++ +     ++     AG  H  VV  DG    +GW ++G L
Sbjct: 232 GLGGKLGHGTRTDEKFPRLIEQFQTLNLQPMVISAGAWHAAVVGRDGRVCTWGWGRYGCL 291

Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT--D 200
           G G+   E  P  V  L +         D+T ++ + +G  + + G  +   LGH    D
Sbjct: 292 GHGNEECEAAPKVVDALTNVKAVHVATGDYTTFVVAEDG-DVYSFGCGESASLGHNAVID 350

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALA--GETIVKVACGTN-----HTVAVDSKGYVYTW 253
            E N   + +         P  + +L    E +V+++   +     HT A+   G +Y +
Sbjct: 351 AEGNRHANVLN--------PELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAF 402

Query: 254 GFGGYGRLGHR---EQKDEWVPRRVDV 277
           G G  G+LG      Q +   P +VD+
Sbjct: 403 GAGDKGQLGIELVANQTERVNPEQVDI 429


>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
          Length = 1049

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-GDKIQRDRPTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG  G +     P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 34/351 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGIDC------------- 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDL 328
           +   +   ++     I  G  +++     G ++      +G+L  N+    + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
           [Pan troglodytes]
 gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|449685467|ref|XP_002154638.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
           [Hydra magnipapillata]
          Length = 1679

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 77/285 (27%), Positives = 130/285 (45%), Gaps = 31/285 (10%)

Query: 69  HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK-AGAGRSHTVVVTE 127
           H +A+   G  Y+WG  E G+LGHG+   +  P ++  + K +I     AG  H+  +T+
Sbjct: 433 HTLALTKNGVVYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITK 492

Query: 128 DGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA 187
           DG+   +G  +HG+LG G    +  P+ VR  +   +  A G   TV LS  E  ++   
Sbjct: 493 DGDLYTWGEGEHGRLGHGDSSIQRVPTLVRS-IDAASQVAAGCSHTVVLSKDE-MTVWTF 550

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSK 247
           G    G+LGHG          + K+ Y     P+ + AL G  I K+A GT  ++A+   
Sbjct: 551 GAGDNGKLGHG----------NTKMEY----YPKIVDALKGIRIKKIAAGTQCSIALTWT 596

Query: 248 GYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
           G++Y WG G    +G  +     +P+ V+  +  +++     IS G  +    +   ++Y
Sbjct: 597 GFIYVWGCGPCLGVGAADAV-HLLPKIVESLRDVHIVD----ISLGDCHCLALSADHEVY 651

Query: 308 MWGKLKNNGDDWM--------YPKPLMDLSGWNLRCMDSGNMHHF 344
            WG   N G   +         P  ++ L G  +  + +G  H F
Sbjct: 652 SWGN-NNMGQCGLGHCFTPVSLPTKVLALDGIKIEQISTGTSHSF 695



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 84/334 (25%), Positives = 152/334 (45%), Gaps = 36/334 (10%)

Query: 76  EGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKY-----KIKKAGAGRSHTVVVTEDGN 130
           +G  +  G+   G+LG GD   +     + +L+ +     +I  +    SHT+ +T++G 
Sbjct: 386 DGSLHACGKGSHGKLGLGDSSSKQ---CLHKLNLFNQNIDQISSSKGSDSHTLALTKNGV 442

Query: 131 SLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLP 190
             ++G  + G+LG G++  +  P  +R +      T   A      +  +   +   G  
Sbjct: 443 VYSWGDGEFGKLGHGNVATQKLPKVIRGVFKNQIITFISAGSRHSAAITKDGDLYTWGEG 502

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS-KGY 249
           ++G+LGHG        DSS+      Q  P  + ++   +  +VA G +HTV +   +  
Sbjct: 503 EHGRLGHG--------DSSI------QRVPTLVRSIDAAS--QVAAGCSHTVVLSKDEMT 546

Query: 250 VYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
           V+T+G G  G+LGH   K E+ P+ VD  +   +      I+AG+  S      G +Y+W
Sbjct: 547 VWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRI----KKIAAGTQCSIALTWTGFIYVW 602

Query: 310 GK---LKNNGDDWMY--PKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELG 363
           G    L     D ++  PK +  L   ++  +  G+ H   + AD    SWG+   G+ G
Sbjct: 603 GCGPCLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLALSADHEVYSWGNNNMGQCG 662

Query: 364 YGPYGQKSSAMPKKVDILEGMHVISVACGYGHSL 397
            G +     ++P KV  L+G+ +  ++ G  HS 
Sbjct: 663 LG-HCFTPVSLPTKVLALDGIKIEQISTGTSHSF 695



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 96/210 (45%), Gaps = 25/210 (11%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           I F++AG  S H  A+  +G  YTWG  E G+LGHGD   +  PT+V  +      +  A
Sbjct: 477 ITFISAG--SRHSAAITKDGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSID--AASQVAA 532

Query: 118 GRSHTVVVTEDGNSL-AFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVW 175
           G SHTVV+++D  ++  FG   +G+LG G+ + E  P  V  L    +   A G   ++ 
Sbjct: 533 GCSHTVVLSKDEMTVWTFGAGDNGKLGHGNTKMEYYPKIVDALKGIRIKKIAAGTQCSIA 592

Query: 176 LSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           L+      +   G P  G                V  A      P+ + +L    IV ++
Sbjct: 593 LTWTGFIYVWGCG-PCLG----------------VGAADAVHLLPKIVESLRDVHIVDIS 635

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGR--LGH 263
            G  H +A+ +   VY+WG    G+  LGH
Sbjct: 636 LGDCHCLALSADHEVYSWGNNNMGQCGLGH 665



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 61/343 (17%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA---GAGRSHTVVVTEDGNSLAFGW 136
           Y WG N   QL  G+K +     I++       K A    AG+  T  + +DG+  A G 
Sbjct: 340 YAWGSNSSHQLVEGNKDK-----ILTPKKNDAFKNAIQLEAGQYCTFALFDDGSLHACGK 394

Query: 137 NKHGQLGSGSIRNEIEPSPVRCL---------VSEVTATACGADFTVWLSSVEGASILNA 187
             HG+LG G      + S  +CL         + +++++      T+ L+  +   + + 
Sbjct: 395 GSHGKLGLG------DSSSKQCLHKLNLFNQNIDQISSSKGSDSHTLALT--KNGVVYSW 446

Query: 188 GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI-AALAGETIVKVACGTNHTVAVDS 246
           G  ++G+LGHG                  Q  P+ I      + I  ++ G+ H+ A+  
Sbjct: 447 GDGEFGKLGHGN--------------VATQKLPKVIRGVFKNQIITFISAGSRHSAAITK 492

Query: 247 KGYVYTWGFGGYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGG 303
            G +YTWG G +GRLGH +   + VP   R +D   +        V+ +    +  T G 
Sbjct: 493 DGDLYTWGEGEHGRLGHGDSSIQRVPTLVRSIDAASQVAAGCSHTVVLSKDEMTVWTFGA 552

Query: 304 GQLYMWGKLKNNGDDWM--YPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGE 361
           G     GKL  +G+  M  YPK +  L G  ++ + +G         S  ++W    Y  
Sbjct: 553 GDN---GKL-GHGNTKMEYYPKIVDALKGIRIKKIAAGTQC------SIALTWTGFIY-V 601

Query: 362 LGYGPYGQKSSA-----MPKKVDILEGMHVISVACGYGHSLVI 399
            G GP     +A     +PK V+ L  +H++ ++ G  H L +
Sbjct: 602 WGCGPCLGVGAADAVHLLPKIVESLRDVHIVDISLGDCHCLAL 644



 Score = 45.4 bits (106), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/90 (33%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           GA D   + P  +  L  V I  ++ G   CHC+A+  +   Y+WG N  GQ G G    
Sbjct: 611 GAADAVHLLPKIVESLRDVHIVDISLG--DCHCLALSADHEVYSWGNNNMGQCGLGHCFT 668

Query: 98  R-DRPTIVSELSKYKIKKAGAGRSHTVVVT 126
               PT V  L   KI++   G SH+   T
Sbjct: 669 PVSLPTKVLALDGIKIEQISTGTSHSFAWT 698


>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Gorilla gorilla gorilla]
          Length = 1049

 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +I+  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + I  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 37.7 bits (86), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      +  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLD 51


>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
           abelii]
          Length = 1049

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 154/351 (43%), Gaps = 34/351 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDL 328
           +   +   ++     I  G  +++     G ++      +G+L  N+    + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYCHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|50955670|ref|YP_062958.1| hypothetical protein Lxx21640 [Leifsonia xyli subsp. xyli str.
           CTCB07]
 gi|50952152|gb|AAT89853.1| conserved hypothetical protein [Leifsonia xyli subsp. xyli str.
           CTCB07]
          Length = 596

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 151/361 (41%), Gaps = 49/361 (13%)

Query: 48  TRLR--PLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           TRL+  P VGV    V+AG +S + +  D  G  Y WG NE GQLG GD +    P  V 
Sbjct: 41  TRLQIGP-VGVTFTAVSAGSLSAYALGDD--GNVYAWGDNEYGQLGTGDTVNAHTPVKVM 97

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
             +  K     AG      + +DG++ A+G N++GQLG+G   N    +PV+ ++     
Sbjct: 98  LPAGVKFTALSAGSLSAYALGDDGHAYAWGDNEYGQLGTGDTVNAH--TPVKVMLP---- 151

Query: 166 TACGADFTVWLSSVEGASILNA-------GLPQYGQLGHGTDNEYNTKDSSVKLAYEAQP 218
              G  FT   S    A  +         G   YGQLG  T     T D+ V        
Sbjct: 152 --AGVKFTALSSGGPSAYAVGNDGKTYAWGFNGYGQLGTDT-----TADAHV-------- 196

Query: 219 RPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVF 278
            P A+A  AG +   ++ G+    A+ + G  Y WGF GYG+LG     D  VP  V V 
Sbjct: 197 -PVAVAVPAGVSFTTLSGGSLSAYALGNDGKTYAWGFNGYGQLGTDTTADAHVPVAVAVP 255

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----NNGD--DWMYPKPLMDLSGWN 332
              +       +SAG  ++       + Y WG  +      GD  +   P  +   +G  
Sbjct: 256 AGVSFT----AVSAGVSSAYALGDDRKTYAWGDNEYGQLGRGDTANAHAPVAVTVSAGET 311

Query: 333 LRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
              +  G    +  G +    +WG   YG+LG G     ++     +++  G+ V  V  
Sbjct: 312 FVSVSGGAGSVYARGQNGDTYAWGDNDYGQLGRG----DTANAHTPIEVAAGVEVTGVLF 367

Query: 392 G 392
           G
Sbjct: 368 G 368



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 114/279 (40%), Gaps = 33/279 (11%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N  +P ++    GV    ++AG +S + +  D  G  Y WG NE GQLG GD +    P 
Sbjct: 89  NAHTPVKVMLPAGVKFTALSAGSLSAYALGDD--GHAYAWGDNEYGQLGTGDTVNAHTPV 146

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V   +  K     +G      V  DG + A+G+N +GQLG+ +  +   P  V      
Sbjct: 147 KVMLPAGVKFTALSSGGPSAYAVGNDGKTYAWGFNGYGQLGTDTTADAHVPVAVAVPAGV 206

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
              T  G   + +    +G +    G   YGQLG  T     T D+ V         P A
Sbjct: 207 SFTTLSGGSLSAYALGNDGKTYA-WGFNGYGQLGTDT-----TADAHV---------PVA 251

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +A  AG +   V+ G +   A+      Y WG   YG+LG  +  +   P  V       
Sbjct: 252 VAVPAGVSFTAVSAGVSSAYALGDDRKTYAWGDNEYGQLGRGDTANAHAPVAV------- 304

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMY 321
                  +SAG    S + G G +Y  G+   NGD + +
Sbjct: 305 ------TVSAGETFVSVSGGAGSVYARGQ---NGDTYAW 334


>gi|356560879|ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
          Length = 1080

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 31/274 (11%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P ++  L G  I+ ++AG    H VA+   G  YTWG    G+LGH D  I   +  +++
Sbjct: 178 PCKVDSLGGSFIKLISAG--KFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVIT 235

Query: 106 E------LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
                  L   ++    A + HTV+ T+ G    +G N+ GQLG  S+  +  P  V  L
Sbjct: 236 PRQVTSGLGSRRVMAIAAAKHHTVISTQGGEVFTWGSNREGQLGYPSVDTQPTPRRVSSL 295

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
            S + A A     T  +S +    +   G  + GQLG+GT N  +               
Sbjct: 296 RSRIVAVAAANKHTAVVSDL--GEVFTWGCNREGQLGYGTSNSASNYT------------ 341

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR----LGHREQKDEWVPRRV 275
           P  + +L G+T+ +V+    HT+ + S G V+TWG          +    +K    P + 
Sbjct: 342 PHVVESLKGKTLTRVSAAKYHTIVLGSDGEVFTWGHRLVTPKRVVVSRNLKKSGSTPLKF 401

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW 309
              +R NV+     I+AG V+S      G L+ W
Sbjct: 402 HRKERLNVVS----IAAGMVHSMALTDDGALFYW 431



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 92/197 (46%), Gaps = 19/197 (9%)

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHRE------QKDEW 270
           Q  P  + +L G  I  ++ G  H+VA+ ++G VYTWGFG  GRLGH +      Q    
Sbjct: 175 QKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTWGFGRGGRLGHPDFDIHSGQAAVI 234

Query: 271 VPRRVDV-FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKN------NGDDWMYPK 323
            PR+V        V+     I+A   ++  +  GG+++ WG  +       + D    P+
Sbjct: 235 TPRQVTSGLGSRRVM----AIAAAKHHTVISTQGGEVFTWGSNREGQLGYPSVDTQPTPR 290

Query: 324 PLMDLSGWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILE 382
            +  L    +  + + N H  V +D     +WG  + G+LGYG     S+  P  V+ L+
Sbjct: 291 RVSSLRS-RIVAVAAANKHTAVVSDLGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLK 349

Query: 383 GMHVISVACGYGHSLVI 399
           G  +  V+    H++V+
Sbjct: 350 GKTLTRVSAAKYHTIVL 366



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 126/337 (37%), Gaps = 74/337 (21%)

Query: 75  VEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAF 134
           V    ++WG     QLG G+   +  P  V  L    IK   AG+ H+V +T  G    +
Sbjct: 152 VATEVFSWGSGANYQLGTGNAHIQKLPCKVDSLGGSFIKLISAGKFHSVALTARGEVYTW 211

Query: 135 GWNKHGQLGSGSIRNE------IEPSPVRCLV--SEVTATACGADFTVWLSSVEGASILN 186
           G+ + G+LG             I P  V   +    V A A     TV   S +G  +  
Sbjct: 212 GFGRGGRLGHPDFDIHSGQAAVITPRQVTSGLGSRRVMAIAAAKHHTVI--STQGGEVFT 269

Query: 187 AGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDS 246
            G  + GQLG+ +               + QP PR +++L    IV VA    HT  V  
Sbjct: 270 WGSNREGQLGYPS--------------VDTQPTPRRVSSLRSR-IVAVAAANKHTAVVSD 314

Query: 247 KGYVYTWGFGGYGRLGH--REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGG 304
            G V+TWG    G+LG+        + P  V+  +   +      +SA   ++      G
Sbjct: 315 LGEVFTWGCNREGQLGYGTSNSASNYTPHVVESLKGKTL----TRVSAAKYHTIVLGSDG 370

Query: 305 QLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGY 364
           +++ WG         + PK          R + S N+                       
Sbjct: 371 EVFTWGH------RLVTPK----------RVVVSRNL----------------------- 391

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
               +KS + P K    E ++V+S+A G  HS+ + D
Sbjct: 392 ----KKSGSTPLKFHRKERLNVVSIAAGMVHSMALTD 424


>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pongo abelii]
          Length = 979

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYCHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
          Length = 395

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 130/279 (46%), Gaps = 44/279 (15%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
           SP  +  L GV I  V A     HC+AVD +GR Y WG NE GQ G   +        ++
Sbjct: 87  SPAPVDALAGVSI--VQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALR 144

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
           RD P       K K+++  AG +H+VV+T+DG+   +G  W        G I+    P  
Sbjct: 145 RDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHVWTWGQPWPP------GDIKQISTPVR 198

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           V+ L   V   A GA     L+  E   +   G  +YGQLG G                +
Sbjct: 199 VQGL-ENVKVIAVGAFHN--LALTEDGILWAWGNNEYGQLGTG----------------D 239

Query: 216 AQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWVP 272
            QPR  P  +  L+  ++V +A G  H+ A+  +G VY WG G +GRLG  + K    VP
Sbjct: 240 TQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVP 299

Query: 273 RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           ++V++    +++     +S G  +S      G+++ +G+
Sbjct: 300 QKVELLAGEDII----QVSCGGTHSVALTRDGRMFSYGR 334



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 93/335 (27%), Positives = 143/335 (42%), Gaps = 42/335 (12%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   + D    V+ L    +    AG  +++ +  DG    +GWN+ G 
Sbjct: 16  WGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNSLAICADGRLFTWGWNQRGT 75

Query: 142 LG-SGSIRNEIEPSPVRCL--VSEVTATACGADFTVW--LSSVEGASILNAGLPQYGQLG 196
           LG     + E  P+PV  L  VS V A   G     W  L+  +       G  +YGQ G
Sbjct: 76  LGHPPETKTESSPAPVDALAGVSIVQAAIGG-----WHCLAVDDKGRAYAWGGNEYGQCG 130

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
                E   K+   +      P P+  A      + +VA G  H+V +   G+V+TWG  
Sbjct: 131 ----EEAERKEDGTRALRRDIPIPQRCAPKL--KVRQVAAGGTHSVVLTQDGHVWTWG-- 182

Query: 257 GYGRLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK 313
                        W P   +++    R   L    VI+ G+ ++      G L+ WG  +
Sbjct: 183 -----------QPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNE 231

Query: 314 ----NNGDDWMYPKPLM--DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGP 366
                 GD     +P+    LS  +L  + +G  H   +  +    +WG  ++G LG+G 
Sbjct: 232 YGQLGTGDTQPRSQPIRVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFG- 290

Query: 367 YGQKSSAM-PKKVDILEGMHVISVACGYGHSLVIV 400
              KSS M P+KV++L G  +I V+CG  HS+ + 
Sbjct: 291 -DDKSSHMVPQKVELLAGEDIIQVSCGGTHSVALT 324



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 161/383 (42%), Gaps = 56/383 (14%)

Query: 53  LVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYK 111
           L  + +  V AG  S + +A+  +GR +TWG N+RG LGH  + + +  P  V  L+   
Sbjct: 41  LDALAVSAVVAG--SRNSLAICADGRLFTWGWNQRGTLGHPPETKTESSPAPVDALAGVS 98

Query: 112 IKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIE--------PSPVRCLVS-E 162
           I +A  G  H + V + G + A+G N++GQ G  + R E          P P RC    +
Sbjct: 99  IVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLK 158

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   A G   +V L+  +   +   G P       G   + +T              P  
Sbjct: 159 VRQVAAGGTHSVVLT--QDGHVWTWGQP----WPPGDIKQIST--------------PVR 198

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L  E +  +A G  H +A+   G ++ WG   YG+LG  + +    P RV+     +
Sbjct: 199 VQGL--ENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS 256

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLSGWNLRC 335
           ++     I+AG  +S+     G++Y WG+ ++     GDD    M P+ +  L+G ++  
Sbjct: 257 LVD----IAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAGEDIIQ 312

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG----------M 384
           +  G  H   +  D    S+G   +G LGYG        M   +D+              
Sbjct: 313 VSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSGGDSGGQW 372

Query: 385 HVISVACGYGHSLVIVDRTNVGE 407
               VACG  H+L I   T   E
Sbjct: 373 QARYVACGGRHTLAIATWTEADE 395



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 79/280 (28%), Positives = 122/280 (43%), Gaps = 23/280 (8%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G  + GQLG G    E     V  L +  V+A   G+  +  L+      +   G  
Sbjct: 14  LAWGSGEDGQLGMGGYEEEDWARGVAALDALAVSAVVAGSRNS--LAICADGRLFTWGWN 71

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           Q G LGH  + +            E+ P P  + ALAG +IV+ A G  H +AVD KG  
Sbjct: 72  QRGTLGHPPETKT-----------ESSPAP--VDALAGVSIVQAAIGGWHCLAVDDKGRA 118

Query: 251 YTWGFGGYGRLGHREQKDEWVPR--RVDVFQRNNVLPPEAV--ISAGSVNSSCTAGGGQL 306
           Y WG   YG+ G   ++ E   R  R D+       P   V  ++AG  +S      G +
Sbjct: 119 YAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGGTHSVVLTQDGHV 178

Query: 307 YMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYG 365
           + WG+    GD      P+      N++ +  G  H+  +  D    +WG+ +YG+LG G
Sbjct: 179 WTWGQPWPPGDIKQISTPVRVQGLENVKVIAVGAFHNLALTEDGILWAWGNNEYGQLGTG 238

Query: 366 PYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
               +S   P +V+ L  + ++ +A G  HS  +     V
Sbjct: 239 DTQPRS--QPIRVEGLSDLSLVDIAAGGWHSTALTKEGEV 276



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 98/205 (47%), Gaps = 12/205 (5%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
            + +P R++ L  V +  V A     H +A+  +G  + WG NE GQLG GD   R +P 
Sbjct: 192 QISTPVRVQGLENVKVIAVGA----FHNLALTEDGILWAWGNNEYGQLGTGDTQPRSQPI 247

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
            V  LS   +    AG  H+  +T++G   A+G  +HG+LG G  + + + P  V  L  
Sbjct: 248 RVEGLSDLSLVDIAAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKVELLAG 307

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           E +   +CG   +V L+      + + G   +G+LG+G      T    +++  +  P  
Sbjct: 308 EDIIQVSCGGTHSVALT--RDGRMFSYGRGDHGRLGYG---RKVTTGHPMEVPIDLPPPG 362

Query: 221 RAIAALAGETIVK-VACGTNHTVAV 244
            +     G+   + VACG  HT+A+
Sbjct: 363 TSGGDSGGQWQARYVACGGRHTLAI 387


>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
          Length = 979

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------CK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pan paniscus]
 gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1049

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
          Length = 1016

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 127/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++  PS +  L ++ V   ACG   +  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  V V   +  L  E+  S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLGV--GRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 211 NIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325

Query: 193 GQLGHGTDNEYNTK-----DSSVKLAYEAQPRPRAIAALAG 228
           GQLG+G   +          SS +L  E+    + +  +AG
Sbjct: 326 GQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAG 366



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 16/167 (9%)

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEVTA 165
           L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L     A
Sbjct: 135 LQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLA 194

Query: 166 TACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAA 225
                +      S+ G +I + G  ++GQLG G                E++  P  I  
Sbjct: 195 QISAGEAHSMALSMSG-NIYSWGKNEFGQLGLGHT--------------ESKDYPSLIEG 239

Query: 226 LAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
           L  + +  VACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 240 LDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 113/280 (40%), Gaps = 43/280 (15%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           KI     G  H ++++ DG    +       L   ++  E           ++    CG 
Sbjct: 98  KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFENVLQE----------KKIIQITCGD 147

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ LS  +G  +   G   +GQLG G               + +   P+ +  LAG  
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGRK-------------FPSTTTPQIVEHLAGVP 192

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           + +++ G  H++A+   G +Y+WG   +G+  LGH E KD   P  ++      V     
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKD--YPSLIEGLDNQKV----E 246

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++ G  +S+     G L+ +G  K      N+  + + P  + +L G+ +  +  G  H
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306

Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
              +V       S+G  + G+LG G  G +   MP  V +
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 14/188 (7%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R    L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 130 RFENVLQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNL 333
                 P A ISAG  +S   +  G +Y WGK +       + +   YP  +  L    +
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKV 245

Query: 334 RCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACG 392
             +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +ACG
Sbjct: 246 EFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQIACG 303

Query: 393 YGHSLVIV 400
             H+L  V
Sbjct: 304 RWHTLAYV 311


>gi|192361760|ref|YP_001982981.1| IPT/TIG domain-containing protein [Cellvibrio japonicus Ueda107]
 gi|190687925|gb|ACE85603.1| IPT/TIG domain protein [Cellvibrio japonicus Ueda107]
          Length = 12743

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 138/331 (41%), Gaps = 33/331 (9%)

Query: 69    HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYK-------IKKAGAGRSH 121
             H +A+D + R + WG N  GQLG G         + ++LS+ +       I    AG  H
Sbjct: 12260 HVLALDDKNRVWGWGMNWSGQLGDGTYDNNRYAPVKTDLSQLRSMEDSADIIAISAGYGH 12319

Query: 122   TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRC--LVSEVTATACGADFTVWLSSV 179
             ++ +   G   A+G N  GQLG+ + +  + P  V    L       A   D+       
Sbjct: 12320 SLALDSLGRVWAWGSNSSGQLGTNNTQRSLVPILVDLSPLAGAKVVAAKATDY------- 12372

Query: 180   EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
                   N  L + GQL    DN Y    +    +Y   P     +AL+   +V    G  
Sbjct: 12373 -----FNMALDESGQLWAWGDNRYGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAY 12427

Query: 240   HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
             H +A+D  G V+ WG   YG+LG+    +  VP +V++     V      +  G+  S  
Sbjct: 12428 HVLALDDAGQVWAWGNNSYGQLGNGSTANSLVPVKVNLSALEGV--GVQSVEVGNRYSML 12485

Query: 300   TAGGGQLYMW-----GKLKNNGDDWMYPKPLMDLSGWN---LRCMDSGNMHHFVGADSS- 350
                 G+++ W     G L       +Y   L+D S +N   +  +D+GN  H +  D S 
Sbjct: 12486 LDKLGRIWTWGYNDYGSLGTGNRQSLYTPTLIDQSAFNGAVIHSIDAGNSFHNLAMDESN 12545

Query: 351   -CISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
                +WG+  YGE+G G Y      +P ++ +
Sbjct: 12546 NVWTWGYGGYGEMGNGSYSNSLLPIPVRIPV 12576



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 102/224 (45%), Gaps = 33/224 (14%)

Query: 193   GQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYT 252
             GQLG GT +  N + + VK    +Q R    +A     I+ ++ G  H++A+DS G V+ 
Sbjct: 12279 GQLGDGTYD--NNRYAPVKTDL-SQLRSMEDSA----DIIAISAGYGHSLALDSLGRVWA 12331

Query: 253   WGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSS-----CTAGGGQLY 307
             WG    G+LG    +   VP  VD       L P A     +  ++          GQL+
Sbjct: 12332 WGSNSSGQLGTNNTQRSLVPILVD-------LSPLAGAKVVAAKATDYFNMALDESGQLW 12384

Query: 308   MWG-----KLKNNGD-DWMYPKPLMD---LSGWNLRCMDSGNMHHFVGADSSCI-SWGHA 357
              WG     +L N     ++Y     D   LS   +   D G  H     D+  + +WG+ 
Sbjct: 12385 AWGDNRYGRLGNGSSGSYLYLPTATDQSALSSNKVVDFDIGAYHVLALDDAGQVWAWGNN 12444

Query: 358   QYGELGYGPYGQKSSAMPKKVDI--LEGMHVISVACGYGHSLVI 399
              YG+LG G     +S +P KV++  LEG+ V SV  G  +S+++
Sbjct: 12445 SYGQLGNG--STANSLVPVKVNLSALEGVGVQSVEVGNRYSMLL 12486



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 4/115 (3%)

Query: 48    TRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV--S 105
             T +  L G  I  +AAG      +A+D  GR ++WG N  GQLG G      RP  V  S
Sbjct: 10980 TDISALDGASINALAAG--DAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVDLS 11037

Query: 106   ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
              L  ++I    A   +   + E+GN  ++G N  GQLG     N++ P  V   V
Sbjct: 11038 NLMGFRIVNIVAADHYAFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSV 11092



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 10/141 (7%)

Query: 192   YGQLGHGTDNEYNTKDSSV-KLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
             +  +  GT        SS+ K  Y  +  P A A L G  + +VA  T H +A+D +G +
Sbjct: 11306 WATMATGTQYHLQLSMSSIYKKQYAYKVEPVAYAQLDGVALSRVATNTAHNLAIDGQGKL 11365

Query: 251   YTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG 310
             ++WG   YG+LG+    D   P   D   ++NV    A ++ G   S      G ++ WG
Sbjct: 11366 WSWGKNTYGQLGNGSYDDITAPLTQDFSGKDNV--GLASVAVGEQFSIAIDNLGDVWSWG 11423

Query: 311   KLKNNGD------DWMYPKPL 325
                N+G+      DW  P P+
Sbjct: 11424 -FNNSGELGQGHSDWAVPIPV 11443



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 27/185 (14%)

Query: 103   IVSELSKYKIKKAG-----AGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
             +V ++ K  + + G      GR HT++   D    A+G N +G+LG G+ +++   +PV 
Sbjct: 10923 LVQQVVKLHVIEVGKSLHAVGRYHTLLWAND-ILWAWGRNSNGELGIGNWQDQY--APVM 10979

Query: 158   CLVS-----EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKL 212
               +S      + A A G  F++ L   +   + + GL  YGQLG G+ + +         
Sbjct: 10980 TDISALDGASINALAAGDAFSLALD--DRGRLWSWGLNNYGQLGIGSTSAF--------- 11028

Query: 213   AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
                ++P+   ++ L G  IV +    ++  A+D  G V++WG    G+LG     ++ VP
Sbjct: 11029 ---SRPQEVDLSNLMGFRIVNIVAADHYAFALDENGNVWSWGRNDLGQLGIALTGNQLVP 11085

Query: 273   RRVDV 277
               VD+
Sbjct: 11086 MAVDL 11090



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 45    VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPT 102
             V P     L GV +  VA    + H +A+D +G+ ++WG+N  GQLG+G  D I      
Sbjct: 11333 VEPVAYAQLDGVALSRVATN--TAHNLAIDGQGKLWSWGKNTYGQLGNGSYDDITAPLTQ 11390

Query: 103   IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG 145
               S      +     G   ++ +   G+  ++G+N  G+LG G
Sbjct: 11391 DFSGKDNVGLASVAVGEQFSIAIDNLGDVWSWGFNNSGELGQG 11433



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 99/234 (42%), Gaps = 21/234 (8%)

Query: 70    CVAVDVEGRCYTWGRNERGQLGHGDKIQRDR---PTIVSELSKYKIKKAGAGRSHTVVVT 126
              +A+D +G+ + WG N+RGQLG    I R     P  +S L   +IK   A      ++ 
Sbjct: 11789 SLALDDKGQLWAWGINDRGQLGVASTIYRSTIPVPADMSALGGTRIKTLQAAGDQGYLLD 11848

Query: 127   EDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVT-----ATACGADFTVWLSSVEG 181
             E G   A+G       G  S   E   +PV+  ++EV+       + G ++ + L     
Sbjct: 11849 ELGRLWAWGARVGDWTGMDS---ESAYAPVQVDLAEVSGGKALQMSAGNNYLLMLDENNQ 11905

Query: 182   ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
               +L      Y       D E N+ +  +            +++L  ++ + ++ G++H 
Sbjct: 11906 VWVLGNAN-NYSASSSSADGENNSDNPFLNRV--------DLSSLGDKSAISISAGSHHD 11956

Query: 242   VAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
             + +D +G +++WG+   G LG         P  V     + VLP E  IS  +V
Sbjct: 11957 LLLDDEGGIWSWGYNYNGELGVDGVYQTSTPIFVAKL-YSEVLPAELHISEDTV 12009



 Score = 39.7 bits (91), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 79    CYTWGRNERGQLGHGDKIQRDRP--TIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGW 136
              + WGRN  G+LG G+   +  P  T +S L    I    AG + ++ + + G   ++G 
Sbjct: 10955 LWAWGRNSNGELGIGNWQDQYAPVMTDISALDGASINALAAGDAFSLALDDRGRLWSWGL 11014

Query: 137   NKHGQLGSGSIRNEIEPSPV 156
             N +GQLG GS      P  V
Sbjct: 11015 NNYGQLGIGSTSAFSRPQEV 11034



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 69    HCVAVDVEGRCYTWGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
             H +A+D +GR + WG N  GQLG+G  D  Q  +P   +      I    AG   ++ + 
Sbjct: 11734 HYLALDHKGRVWAWGENYGGQLGNGTYDTPQVLQPIDPAAFHGAAIVAIAAGEGFSLALD 11793

Query: 127   EDGNSLAFGWNKHGQLGSGS 146
             + G   A+G N  GQLG  S
Sbjct: 11794 DKGQLWAWGINDRGQLGVAS 11813



 Score = 39.7 bits (91), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 49/170 (28%)

Query: 223   IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
             I+AL G +I  +A G   ++A+D +G +++WG   YG+LG         P+ VD      
Sbjct: 10982 ISALDGASINALAAGDAFSLALDDRGRLWSWGLNNYGQLGIGSTSAFSRPQEVD------ 11035

Query: 283   VLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
                                                       L +L G+ +  + + + +
Sbjct: 11036 ------------------------------------------LSNLMGFRIVNIVAADHY 11053

Query: 343   HFVGADSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVAC 391
              F   ++  + SWG    G+LG    G +   M   + +L G +VIS+  
Sbjct: 11054 AFALDENGNVWSWGRNDLGQLGIALTGNQLVPMAVDLSVLGGANVISMTT 11103


>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
           [Glycine max]
          Length = 474

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 172/416 (41%), Gaps = 64/416 (15%)

Query: 36  RKGALDGNLVSPTRLRPLV-----GVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQL 90
           RKG  D  L  P +L P +     G + R++   C   H  A+  +G  +TWG N+ GQL
Sbjct: 34  RKGKED-QLRIPKQLPPELFGCPAGTNARWLDVACGREHTAAIASDGSLFTWGANDFGQL 92

Query: 91  GHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTE----DGN-SLAFGWNKHGQLGSG 145
           G G + +R  P  V +L    +K    G   +  + E    DG  S    W      GS 
Sbjct: 93  GDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTRRLWVWGQNQGSN 152

Query: 146 SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNE-- 202
             R          ++ EV+   CGA   V LS  EG  +L A G  +YGQLG G   E  
Sbjct: 153 LPRLFWGAFKPNTIIREVS---CGAVHVVALSE-EG--LLQAWGYNEYGQLGRGVTCEGL 206

Query: 203 --YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
                  S  K   EA   P  +       I KV+CG  HT  +  KG VYTWG G  G+
Sbjct: 207 QGACIISSYAKFLDEA---PELV------KIAKVSCGEYHTAVISDKGEVYTWGLGNMGQ 257

Query: 261 LGHREQK---DEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------ 311
           LGH   +    E +PRRV     + +   +  ++ G V++     GG LY WG       
Sbjct: 258 LGHSSLQYGDKELLPRRVVTL--DGIFIKD--VACGGVHTCSVTQGGALYAWGGGRSGQL 313

Query: 312 -----------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVG-ADSSCISWGHAQY 359
                      + N+   +    P++ +    ++ +  G  H  +  +D     WG+  Y
Sbjct: 314 GLGPQTGLFSCVANDSQTFFRNIPVLVVPK-GVQLVACGYSHTLISMSDGRIHGWGYNNY 372

Query: 360 GELGYGPYGQKSSA--MPKKVDILEGMHVISVACGYGHSLVIVDRTNVGERLDQVI 413
           G+       +K +    P  +D   G  V  +A G GHS V+ D  ++ E  + V+
Sbjct: 373 GQAA----NEKCTYAWYPSPIDWCVG-EVRKLAAGGGHSAVLTDAYSLKELCEFVL 423


>gi|291223965|ref|XP_002731978.1| PREDICTED: cytochrome P450, family 4, subfamily F, polypeptide
           2-like [Saccoglossus kowalevskii]
          Length = 1049

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 93/381 (24%), Positives = 159/381 (41%), Gaps = 68/381 (17%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG 118
           R   +GC+   C+    +   ++WG N  GQLG G +  + +P  + ++   KI     G
Sbjct: 11  RLCKSGCIVGTCL----QRGMFSWGANSYGQLGLGHQDDKSKPEKILKIPDGKIVDVTGG 66

Query: 119 RSHTVVVTEDGNSLAFGWNKHGQLGSG-----SIRNEIEPSPVRCLVSEVTATACGADFT 173
             HT+++T+ G   + GWN  GQLG G     S+   I+  P       V    CG DF 
Sbjct: 67  GGHTLLLTDCGAIYSCGWNSKGQLGLGHTDNLSVFKRIDHLP------PVIKVTCGWDFC 120

Query: 174 VWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVK 233
             L+  E   +   G   +GQLG    + +    + ++              +    +  
Sbjct: 121 --LAITEVGDLYAWGCNVFGQLGIPEIDSFTAIPTKIQ--------------IFSRNVTS 164

Query: 234 VACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKD-----EWVPRRVDVFQRNNVLPPEA 288
           +A G  H++AV + G +++WG    G+LG+ + K      + VP++V   +  N+    +
Sbjct: 165 IAAGLRHSLAVTNDGKLWSWGSARKGQLGNDQSKTGYQLLQRVPKQVHKLE--NISSVSS 222

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLKNN---------------GDDWMYPKP----LMDLS 329
                +  ++C    G +Y+WG  K+N                 + + P P    L    
Sbjct: 223 GSYHSTALTAC----GNMYLWGSNKHNQLTNSVQGVVQSGGSSKEDILPVPTKLNLELFG 278

Query: 330 GWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYG----QKSSAMPKKVDILEGM 384
           G  +  + SG  H   +  DS+   WG   Y +LG    G    +K    PK++ IL+ +
Sbjct: 279 GRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGNNCAKKDVTKPKELVILKDI 338

Query: 385 HVISVACGYGHSLVIVDRTNV 405
               +ACG  H+L + D   V
Sbjct: 339 K--QIACGSEHNLALSDDNKV 357



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 34/262 (12%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGH-----GD 94
           +D     PT+++ +   ++  +AAG    H +AV  +G+ ++WG   +GQLG+     G 
Sbjct: 145 IDSFTAIPTKIQ-IFSRNVTSIAAGLR--HSLAVTNDGKLWSWGSARKGQLGNDQSKTGY 201

Query: 95  KIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGS---------G 145
           ++ +  P  V +L    I    +G  H+  +T  GN   +G NKH QL +         G
Sbjct: 202 QLLQRVPKQVHKLEN--ISSVSSGSYHSTALTACGNMYLWGSNKHNQLTNSVQGVVQSGG 259

Query: 146 SIRNEIEPSPVRC---LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG-TDN 201
           S + +I P P +    L       A  + +T  L+    +++   G   Y QLG   T N
Sbjct: 260 SSKEDILPVPTKLNLELFGGRQILAVHSGWTHILAITHDSNVFGWGRNDYSQLGISLTGN 319

Query: 202 EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRL 261
               KD +         +P+ +  L  + I ++ACG+ H +A+     V  WG+  +G  
Sbjct: 320 NCAKKDVT---------KPKELVIL--KDIKQIACGSEHNLALSDDNKVLAWGWNEHGSC 368

Query: 262 GHREQKDEWVPRRVDVFQRNNV 283
           G+ ++++   P+ +D   +  +
Sbjct: 369 GNGKEENVLTPQVIDDLAKEKI 390


>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
 gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
 gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
 gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
          Length = 1049

 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 46/280 (16%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDK--------IQ 97
           SP  +  LVGV I   A G    HC+AVD +GR Y WG NE GQ G   +        ++
Sbjct: 84  SPAHVDALVGVKIVQAAIG--GWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALR 141

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPSP 155
           RD P       K K+++  AG +H+VV+T++G+   +G  W        G I+N   P  
Sbjct: 142 RDIPIPQRCALKLKVRQVAAGGTHSVVLTQEGHVWTWGQPWPP------GDIKNISTPVR 195

Query: 156 VRCLVSEVTATACGADFTVWLSSVEGASILNA-GLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           V+ L  +V+  A GA   + LS      IL A G  +YGQLG G                
Sbjct: 196 VQGL-EQVSMIAVGAFHNLALSV---DRILWAWGNNEYGQLGIG---------------- 235

Query: 215 EAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWV 271
           + QPR  P  +  L+  ++V +A G  H+ A+  +G VY WG G +GRLG  + K    V
Sbjct: 236 DTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMV 295

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           P +V +    +++     +S G  +S      G+++ +G+
Sbjct: 296 PLQVQLLAGEDIVQ----VSCGGTHSVVLTSDGRIFSYGR 331



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 145/332 (43%), Gaps = 36/332 (10%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G   ++DR   +  L  Y +    AG  +++ + +DG+   +GWN+ G 
Sbjct: 13  WGSGEDGQLGMGGCDEKDRARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQRGT 72

Query: 142 LG-SGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           LG     + E  P+ V  LV  ++   A G      L+  +       G  +YGQ G   
Sbjct: 73  LGHPPETKTESSPAHVDALVGVKIVQAAIGGWHC--LAVDDKGRAYAWGGNEYGQCG--- 127

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
             E   K+   +      P P+  A      + +VA G  H+V +  +G+V+TWG     
Sbjct: 128 -EEPERKEDGTRALRRDIPIPQRCALKL--KVRQVAAGGTHSVVLTQEGHVWTWG----- 179

Query: 260 RLGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN- 315
                     W P   + +    R   L   ++I+ G+ ++   +    L+ WG  +   
Sbjct: 180 --------QPWPPGDIKNISTPVRVQGLEQVSMIAVGAFHNLALSVDRILWAWGNNEYGQ 231

Query: 316 ---GDDWMYPKPLM--DLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              GD     +P+    LS  +L  + +G  H   +  +    +WG  ++G LG+G    
Sbjct: 232 LGIGDTQPRSQPIRVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFG--DD 289

Query: 370 KSSAM-PKKVDILEGMHVISVACGYGHSLVIV 400
           KSS M P +V +L G  ++ V+CG  HS+V+ 
Sbjct: 290 KSSHMVPLQVQLLAGEDIVQVSCGGTHSVVLT 321



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 168/386 (43%), Gaps = 56/386 (14%)

Query: 49  RLRPLVGVDIRFVAAGCV-SCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSE 106
           R R +  +D   V+A    S + +A+  +G  +TWG N+RG LGH  + + +  P  V  
Sbjct: 31  RARCICALDAYAVSAVVAGSRNSLAICDDGSLFTWGWNQRGTLGHPPETKTESSPAHVDA 90

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG---------SGSIRNEIEPSPVR 157
           L   KI +A  G  H + V + G + A+G N++GQ G         + ++R +I P P R
Sbjct: 91  LVGVKIVQAAIGGWHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDI-PIPQR 149

Query: 158 C-LVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
           C L  +V   A G   +V L+  +   +   G P             + K+ S       
Sbjct: 150 CALKLKVRQVAAGGTHSVVLT--QEGHVWTWGQPW---------PPGDIKNIST------ 192

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
              P  +  L  E +  +A G  H +A+     ++ WG   YG+LG  + +    P RV+
Sbjct: 193 ---PVRVQGL--EQVSMIAVGAFHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQPIRVE 247

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDD---WMYPKPLMDLS 329
                +++     I+AG  +S+     G++Y WG+ ++     GDD    M P  +  L+
Sbjct: 248 GLSNLSLVD----IAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLA 303

Query: 330 GWNLRCMDSGNMHHFV-GADSSCISWGHAQYGELGYGPYGQKSSAM--------PKKVDI 380
           G ++  +  G  H  V  +D    S+G   +G LG G        M        PK    
Sbjct: 304 GEDIVQVSCGGTHSVVLTSDGRIFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKTSTS 363

Query: 381 LEGM-HVISVACGYGHSLVIVDRTNV 405
            EG+     VACG  H+L IV  T++
Sbjct: 364 SEGLWQANYVACGGRHTLAIVTWTDM 389



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 98/204 (48%), Gaps = 11/204 (5%)

Query: 43  NLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           N+ +P R++ L  V +  V A     H +A+ V+   + WG NE GQLG GD   R +P 
Sbjct: 189 NISTPVRVQGLEQVSMIAVGA----FHNLALSVDRILWAWGNNEYGQLGIGDTQPRSQPI 244

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVS 161
            V  LS   +    AG  H+  +T++G   A+G  +HG+LG G  + + + P  V+ L  
Sbjct: 245 RVEGLSNLSLVDIAAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPLQVQLLAG 304

Query: 162 E-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRP 220
           E +   +CG   +V L+S     I + G   +G+LG   D    T    +++     P  
Sbjct: 305 EDIVQVSCGGTHSVVLTS--DGRIFSYGRGDHGRLG---DGRKVTTGHPMEVPINLPPPK 359

Query: 221 RAIAALAGETIVKVACGTNHTVAV 244
            + ++        VACG  HT+A+
Sbjct: 360 TSTSSEGLWQANYVACGGRHTLAI 383


>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
          Length = 1057

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 116/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G   + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGIDCKKQTSPQLIKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/351 (26%), Positives = 153/351 (43%), Gaps = 34/351 (9%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG G D              
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGID-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ I +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDL 328
           +   +   ++     I  G  +++     G ++      +G+L  N+    + P+ + +L
Sbjct: 236 LKSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 143/331 (43%), Gaps = 36/331 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLG-- 117

Query: 199 TDNEYNTKDSSVKLAYEAQPR-PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGG 257
                        L  E   R PR I +L+   IV+VACG  H++A+     V+ WG   
Sbjct: 118 ------------LLGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNK 165

Query: 258 YGRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK--- 313
           YG+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K   
Sbjct: 166 YGQLGLGIDCKKQTSPQLI----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQ 221

Query: 314 ---NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQ 369
              N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     
Sbjct: 222 LGLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSH 281

Query: 370 KSSAMPKKVDILEGMHVISVACGYGHSLVIV 400
           + +  P+KV  L G  V  +ACG  H+   V
Sbjct: 282 EIN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLLG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|408681155|ref|YP_006880982.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
 gi|328885484|emb|CCA58723.1| hypothetical protein SVEN_5437 [Streptomyces venezuelae ATCC 10712]
          Length = 386

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 145/338 (42%), Gaps = 58/338 (17%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAG-----RSHTVVVTEDGNSLAFGW 136
           WG N  GQLG+G  + +  P  V  L++  ++   AG     RS  V +  DG   ++G 
Sbjct: 36  WGGNGAGQLGNGTTLAQQTPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQSWGG 95

Query: 137 NKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
           N  GQLG GS      P+ V  L S V+ TA G +      +V G  +L  G   YGQLG
Sbjct: 96  NAAGQLGDGSTVGRSFPAAVTGL-SGVSKTAAGVNSAY---AVRGGRVLAWGDNTYGQLG 151

Query: 197 HGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFG 256
           +GT                A PRP A+ +L    +  +A G  H +A+   G V+TWG  
Sbjct: 152 NGTAG--------------ASPRPVAVQSL--NKVEDIAAGCFHAIALREDGTVWTWGRN 195

Query: 257 GYGRLGHREQKDEWVPRRV----DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKL 312
            YG+LG     D   P+RV    DV +          +SAG  +S      G +  WG  
Sbjct: 196 HYGQLGLGTTTDRNTPQRVPDLTDVVE----------VSAGCHHSLARTADGTVKAWGYN 245

Query: 313 KN----NGDDWMYPKP-----LMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELG 363
            +    NG       P     L D+S    R   +G     V  D    +WG    G LG
Sbjct: 246 ASGQLGNGSTAHASAPVDVAHLADVS----RIFAAGYHSFAVLDDGQLRAWGWNSAGHLG 301

Query: 364 YGPYGQKSSAMPKKVDILEGM-HVISVACGYGHSLVIV 400
            G    +++ +P     + G+  V ++A GY H++ ++
Sbjct: 302 DGSTVSRTTPVP-----VPGLTDVTALAGGYNHTVAVL 334



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 151/343 (44%), Gaps = 43/343 (12%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVS---CHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT 102
           +P  +R L   D+R +AAG  S      VA+  +G   +WG N  GQLG G  + R  P 
Sbjct: 54  TPAGVRGLNRADVRHLAAGGDSDTRSFAVALLNDGTVQSWGGNAAGQLGDGSTVGRSFPA 113

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            V+ LS      AG   ++ V     G  LA+G N +GQLG+G+      P  V+ L ++
Sbjct: 114 AVTGLSGVSKTAAGVNSAYAV---RGGRVLAWGDNTYGQLGNGTAGASPRPVAVQSL-NK 169

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V   A G    + L   E  ++   G   YGQLG GT  + NT              P+ 
Sbjct: 170 VEDIAAGCFHAIALR--EDGTVWTWGRNHYGQLGLGTTTDRNT--------------PQR 213

Query: 223 IAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNN 282
           +  L    +V+V+ G +H++A  + G V  WG+   G+LG+        P  VDV    +
Sbjct: 214 VPDL--TDVVEVSAGCHHSLARTADGTVKAWGYNASGQLGNGSTAHASAP--VDVAHLAD 269

Query: 283 VLPPEAVISAGSVNSSCTAGGGQLYMWG--KLKNNGD----DWMYPKPLMDLSGWNLRCM 336
           V    + I A   +S      GQL  WG     + GD        P P+  L+  ++  +
Sbjct: 270 V----SRIFAAGYHSFAVLDDGQLRAWGWNSAGHLGDGSTVSRTTPVPVPGLT--DVTAL 323

Query: 337 DSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKS---SAMP 375
             G  H   V AD S ++WG    G+LG G     S   +A+P
Sbjct: 324 AGGYNHTVAVLADGSVLAWGENTLGQLGDGTTTNSSTPVTALP 366


>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
           [Pongo abelii]
          Length = 1057

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 151/352 (42%), Gaps = 36/352 (10%)

Query: 38  GALDGNLV-SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI 96
           G +D  +V  P +    +   +R V  GC   H V V  +G  YT G N+ GQLGH  + 
Sbjct: 15  GGIDEEIVLEPRKSDFFINKKVRDV--GCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EK 70

Query: 97  QRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSP 155
            R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 156 VRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
           ++ L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              
Sbjct: 131 IKSLSDIQIVQVACGYCHSLALS--KASEVFCWGQNKYGQLGLGTD-------------C 175

Query: 215 EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRR 274
           + Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  
Sbjct: 176 KKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNL 235

Query: 275 VDVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMD 327
           +   +   ++          A+   G V +    G GQL       N+    + P+ + +
Sbjct: 236 LKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFE 290

Query: 328 LSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           L G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 291 LMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         K++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYCHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYCHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLD 51


>gi|301755558|ref|XP_002913646.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC6-like [Ailuropoda melanoleuca]
          Length = 1189

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 25/263 (9%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGR 78
            GEL  CG      +GR+    D +   P R+R L  + +  V+  C   H +AV  +GR
Sbjct: 41  NGELHSCGDNSQGQLGRKGVQRDEH---PKRIRTLDNLRVDLVS--CGKEHSLAVCYKGR 95

Query: 79  CYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
            + WG    GQLG G+  + +  PT +  L+  KI +   G  H++ ++E G   ++G N
Sbjct: 96  VFAWGAGSEGQLGVGEFKEINLIPTKIKTLTGIKIIQVSCGHYHSLALSEGGQVFSWGSN 155

Query: 138 KHGQLGSGS-IRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQL 195
            HGQLG G    ++  P  VR L    +T  A G   +  LS + GAS            
Sbjct: 156 SHGQLGLGKECPSQASPQRVRSLDGIPLTQVAAGGAHSFALS-LSGAS-----------F 203

Query: 196 GHGTDN--EYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTW 253
           G G++N  +   + ++V +      +PR+I AL    ++ ++CG  HT  +   G V+T+
Sbjct: 204 GWGSNNAGQLALRQNNVPVQSH---KPRSIGALKNLGVIYISCGYEHTAVLTQTGKVFTF 260

Query: 254 GFGGYGRLGHREQKDEWVPRRVD 276
           G   YG+LGH    ++  P+ V+
Sbjct: 261 GGNSYGQLGHSPTAEKEGPQLVE 283



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 137/308 (44%), Gaps = 40/308 (12%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACG 169
           ++++A +G  H++++  +G   + G N  GQLG   ++ +  P  +R L +  V   +CG
Sbjct: 24  ELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEHPKRIRTLDNLRVDLVSCG 83

Query: 170 ADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGE 229
            + +  L+      +   G    GQLG G   E N               P  I  L G 
Sbjct: 84  KEHS--LAVCYKGRVFAWGAGSEGQLGVGEFKEINLI-------------PTKIKTLTGI 128

Query: 230 TIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQRNNVLPPEA 288
            I++V+CG  H++A+   G V++WG   +G+LG  +E   +  P+RV    R+    P  
Sbjct: 129 KIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKECPSQASPQRV----RSLDGIPLT 184

Query: 289 VISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKP-----LMDLSGWNLRCM 336
            ++AG  +S   +  G  + WG        L+ N       KP     L +L    + C 
Sbjct: 185 QVAAGGAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPRSIGALKNLGVIYISC- 243

Query: 337 DSGNMHHFVGADS-SCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGH 395
             G  H  V   +    ++G   YG+LG+ P  +K    P+ V+ ++G+ V  + CG  H
Sbjct: 244 --GYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEG--PQLVEGIDGL-VSQIDCGSYH 298

Query: 396 SLVIVDRT 403
           +L  V  T
Sbjct: 299 TLAYVYTT 306



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 60/132 (45%), Gaps = 5/132 (3%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLG---HGDKIQRDRPT 102
           SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQL    +   +Q  +P 
Sbjct: 171 SPQRVRSLDGIPLTQVAAG--GAHSFALSLSGASFGWGSNNAGQLALRQNNVPVQSHKPR 228

Query: 103 IVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE 162
            +  L    +     G  HT V+T+ G    FG N +GQLG      +  P  V  +   
Sbjct: 229 SIGALKNLGVIYISCGYEHTAVLTQTGKVFTFGGNSYGQLGHSPTAEKEGPQLVEGIDGL 288

Query: 163 VTATACGADFTV 174
           V+   CG+  T+
Sbjct: 289 VSQIDCGSYHTL 300



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 15/191 (7%)

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHR-EQKDEWVPRRVD 276
           P  R  A  AG  + + A G  H++ + S G +++ G    G+LG +  Q+DE  P+R+ 
Sbjct: 12  PPRRRQAGXAGAELRQAASGERHSLLLLSNGELHSCGDNSQGQLGRKGVQRDEH-PKRIR 70

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLS 329
                 V     ++S G  +S      G+++ WG        +    +  + P  +  L+
Sbjct: 71  TLDNLRV----DLVSCGKEHSLAVCYKGRVFAWGAGSEGQLGVGEFKEINLIPTKIKTLT 126

Query: 330 GWNLRCMDSGNMHHFVGAD-SSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVIS 388
           G  +  +  G+ H    ++     SWG   +G+LG G     S A P++V  L+G+ +  
Sbjct: 127 GIKIIQVSCGHYHSLALSEGGQVFSWGSNSHGQLGLGKEC-PSQASPQRVRSLDGIPLTQ 185

Query: 389 VACGYGHSLVI 399
           VA G  HS  +
Sbjct: 186 VAAGGAHSFAL 196


>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
           latipes]
          Length = 1049

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 150/364 (41%), Gaps = 48/364 (13%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
             C   H + +  +G  YT G N  GQLGH DK   + P +V  L   KI     GR+H+
Sbjct: 38  VACGGQHTLFLLQDGSVYTCGSNSCGQLGH-DK-AGNSPELVGALDTQKITMVSCGRAHS 95

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVWLSSVE 180
           V V E G    +G    GQLG  +    +  P  ++ L    ++   CG    + LS   
Sbjct: 96  VAVNEQGQVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSISQVVCGNQHCIALS--R 153

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              +   G    GQLG G       K  + KL+      P  + +LAG  + ++  G +H
Sbjct: 154 DGQLFTWGQNSSGQLGLG-------KGETSKLS------PSPVKSLAGIPLAQITAGGDH 200

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCT 300
             A+   G V+ WG    G+LG  +++D  VP  +   +   V+     IS G  +++  
Sbjct: 201 CFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVV----YISCGDEHTAAL 256

Query: 301 AGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCI 352
              G L+ +G          + ++ + P+ +M+L G  +  +  G  H   FV +  +  
Sbjct: 257 TKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSGTVY 316

Query: 353 SWGHAQYGELGYGPYGQKSSAMPKKVDILE-----------------GMHVISVACGYGH 395
           ++G   +G+LG G      S  P K D L                     VI + CG  H
Sbjct: 317 AFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKYTVIKIICGGDH 376

Query: 396 SLVI 399
           S ++
Sbjct: 377 SFLM 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 104/219 (47%), Gaps = 21/219 (9%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGD-KIQRDRPTIVS 105
           P  L+ L    I  V  G  + HC+A+  +G+ +TWG+N  GQLG G  +  +  P+ V 
Sbjct: 127 PRLLKKLCDHSISQVVCG--NQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSPSPVK 184

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VT 164
            L+   + +  AG  H   ++  G    +G NK GQLG    ++   P  ++ L S+ V 
Sbjct: 185 SLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVV 244

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIA 224
             +CG + T  L+   G      G    GQLGHG+ N               +  PR + 
Sbjct: 245 YISCGDEHTAALTKSGGLFTFGDG--SRGQLGHGSSNN--------------ELLPRRVM 288

Query: 225 ALAGETIVKVACGTNHTVA-VDSKGYVYTWGFGGYGRLG 262
            L G  + ++ CG +HT+A V S G VY +G   +G+LG
Sbjct: 289 ELMGTEVSQITCGRHHTLAFVPSSGTVYAFGCNSHGQLG 327



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 140/337 (41%), Gaps = 47/337 (13%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           + G+L   G      +G  KG  + + +SP+ ++ L G+ +  + AG    HC A+ + G
Sbjct: 153 RDGQLFTWGQNSSGQLGLGKG--ETSKLSPSPVKSLAGIPLAQITAG--GDHCFALSLSG 208

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             + WG+N+ GQLG  DK  R  P  +  L   ++     G  HT  +T+ G    FG  
Sbjct: 209 AVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDG 268

Query: 138 KHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTVWLSSVEGASILNAGLPQYGQLG 196
             GQLG GS  NE+ P  V  L+ +EV+   CG   T+      G ++   G   +GQLG
Sbjct: 269 SRGQLGHGSSNNELLPRRVMELMGTEVSQITCGRHHTLAFVPSSG-TVYAFGCNSHGQLG 327

Query: 197 HGT----DNEYNTKDSSVKLAY-EAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
            G      + +  K+  + L   + +   R        T++K+ CG +H+  + S     
Sbjct: 328 TGILADLRSPHPVKNDFLTLNLRKGKVYLRIDTGFLKYTVIKIICGGDHSFLMYSS---- 383

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG- 310
                        EQ  E VP    VF  +  L P        +N  C      L  W  
Sbjct: 384 -------------EQCPE-VPEDFRVFNVSKSLSP--------INHDC------LNSWRL 415

Query: 311 KLKNNGDDWMYPKPLMDLSG---WNLRCMDSGNMHHF 344
           KL  N D  +    ++ LS    WN   +D  +  HF
Sbjct: 416 KLLYNTDSNVTKDMIVHLSSTACWNASFLDQSDDAHF 452



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 140/329 (42%), Gaps = 33/329 (10%)

Query: 82  WGRNERGQLGHG-DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHG 140
           WG    GQLG G +      P I    S   +K+   G  HT+ + +DG+    G N  G
Sbjct: 4   WGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSNSCG 63

Query: 141 QLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGT 199
           QLG     N   P  V  L   ++T  +CG   +V ++  E   +   G    GQLG   
Sbjct: 64  QLGHDKAGNS--PELVGALDTQKITMVSCGRAHSVAVN--EQGQVFVWGAGDGGQLG--- 116

Query: 200 DNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYG 259
                T +++V++       PR +  L   +I +V CG  H +A+   G ++TWG    G
Sbjct: 117 ---LETAETAVRI-------PRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSG 166

Query: 260 RLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK----- 313
           +LG  + +  +  P  V    ++    P A I+AG  +    +  G ++ WGK K     
Sbjct: 167 QLGLGKGETSKLSPSPV----KSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLG 222

Query: 314 -NNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKS 371
            N+  D   P  +  L    +  +  G+ H      S    ++G    G+LG+G     +
Sbjct: 223 LNDKQDRAVPCHIKFLRSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHG--SSNN 280

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIV 400
             +P++V  L G  V  + CG  H+L  V
Sbjct: 281 ELLPRRVMELMGTEVSQITCGRHHTLAFV 309



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 120/277 (43%), Gaps = 37/277 (13%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE---VTATACGADFTVWLSSVEGASILNAG 188
           L +G  + GQLG G   N +   P  C V     +   ACG   T++L  ++  S+   G
Sbjct: 2   LCWGNARDGQLGIGVEGNPVF-EPRICHVFSGRGLKEVACGGQHTLFL--LQDGSVYTCG 58

Query: 189 LPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKG 248
               GQLGH                 +A   P  + AL  + I  V+CG  H+VAV+ +G
Sbjct: 59  SNSCGQLGHD----------------KAGNSPELVGALDTQKITMVSCGRAHSVAVNEQG 102

Query: 249 YVYTWGFGGYGRLG-HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY 307
            V+ WG G  G+LG    +    +PR +     +++    + +  G+ +    +  GQL+
Sbjct: 103 QVFVWGAGDGGQLGLETAETAVRIPRLLKKLCDHSI----SQVVCGNQHCIALSRDGQLF 158

Query: 308 MWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQY 359
            WG+       L       + P P+  L+G  L  + +G  H F +    +   WG  + 
Sbjct: 159 TWGQNSSGQLGLGKGETSKLSPSPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKA 218

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHS 396
           G+LG     ++  A+P  +  L    V+ ++CG  H+
Sbjct: 219 GQLGLN--DKQDRAVPCHIKFLRSQRVVYISCGDEHT 253


>gi|225463891|ref|XP_002264093.1| PREDICTED: uncharacterized protein LOC100246114 [Vitis vinifera]
          Length = 1129

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 159/383 (41%), Gaps = 52/383 (13%)

Query: 42  GNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD-- 99
            +L+ P  L   V +D+  +A G    H   V  +G  +TWG    G+LGHG  + RD  
Sbjct: 266 ADLLLPKPLESNVVLDVHHIACGVR--HAALVTRQGEIFTWGEESGGRLGHG--VGRDVI 321

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH--GQLGSGSIRNEIEPS--- 154
           +P +V  L+   +     G  HT  VT  G    +G   H  G LG G+  +   P    
Sbjct: 322 QPRLVESLAFTSVDFVACGEFHTCAVTMAGELFTWGDGTHNAGLLGHGTDVSHWIPKRIS 381

Query: 155 -PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLA 213
            P+  L  +V +  CG   T  +++     +   G   +G LGHG  +          +A
Sbjct: 382 GPLEGL--QVASVTCGPWHTALVTTTR--QLFTFGDGTFGVLGHGDKD---------NVA 428

Query: 214 YEAQPRPRAIAALAGETIVKVACGTNHTVAV-----------DSKGYVYTWGFGGYGRLG 262
           Y     PR + +L+G   + VACG  HT AV            S G ++TWG G   RLG
Sbjct: 429 Y-----PREVESLSGLRTIAVACGVWHTAAVVEVIVTQSSASVSSGKLFTWGDGDKNRLG 483

Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM----WGKLKNNGDD 318
           H +++    P  V      N    + V    S+    T  G    M    +G+L N   D
Sbjct: 484 HGDKEPRLKPTCVPALIEYNF---QKVACGHSLTVGLTTSGQVCTMGSTVYGQLGNPQSD 540

Query: 319 WMYPKPLMD-LSGWNLRCMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPK 376
              P  + D L G  +  +  G  H   + + +   +WG    G LG+G    + +  P 
Sbjct: 541 GKLPCFVEDKLLGECVEEIACGAYHVAVLTSRNEVYTWGKGANGRLGHGDIEDRKT--PT 598

Query: 377 KVDILEGMHVISVACGYGHSLVI 399
            V+ L+  HV  +ACG  ++  I
Sbjct: 599 LVETLKDRHVKYIACGSNYTAAI 621


>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Gorilla gorilla gorilla]
          Length = 1057

 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRIRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +I+  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 50/214 (23%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + I  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158


>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 750

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 167/387 (43%), Gaps = 52/387 (13%)

Query: 28  TCWDAVGRRKGALDGNLVS-----PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTW 82
           T W   G   GAL  + +      P ++  L G  +  VAA   S H +AV  +G  + W
Sbjct: 316 TVWAWGGNSYGALGNDTIETMSTVPVQVPGLSG-GVTVVAA---SSHALAVRSDGTVWAW 371

Query: 83  GRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL 142
           G N  GQLG G   +R     V  LS   +    A + H++ V  D    A+G N  GQL
Sbjct: 372 GGNHYGQLGDGTTSERLVAVPVQGLSG--VMAVAARQEHSLAVRSDATVWAWGRNYEGQL 429

Query: 143 GSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNE 202
           G G+ R    P PV  L S V A A G   +  L+     ++   G  +YGQ+G GT+  
Sbjct: 430 GDGTTRRREVPVPVPKL-SSVVAVAAGRYHS--LAVRFDGTVWAWGDNEYGQVGDGTET- 485

Query: 203 YNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
                        ++  P  +  L G   V VA G NH++ + S G V+ WG   YG+LG
Sbjct: 486 -------------SRKAPVRVPNLGGG--VAVAAGENHSLVLRSDGTVWAWGGNHYGQLG 530

Query: 263 HREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWG----KLKNNGDD 318
           +    D  VP +V        L     ++AG   S      G ++ WG        +G  
Sbjct: 531 NGITSDSPVPVQV------QGLSGGVAVAAGQYYSLAVRSDGTVWAWGLNFEGQLGDGTA 584

Query: 319 WMYPKPLM----DLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA 373
              P P+      LSG     + +G  H   V +D +  +WG    G++G G   ++   
Sbjct: 585 SDSPVPVRVQVPGLSG--GVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAP-RRRVL 641

Query: 374 MPKKVDIL-EGMHVISVACGYGHSLVI 399
           MP +V  L EGM   +VA GY HSL +
Sbjct: 642 MPVQVQGLSEGM---AVAAGYNHSLAV 665



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 147/369 (39%), Gaps = 58/369 (15%)

Query: 47  PTRLRPLVGVDIRF-VAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           P+R   L G   R  +A G    H  AV  +G  +  G N  GQLG G   +R  P  V 
Sbjct: 36  PSRASALGGARARARIATGA--NHSWAVRPDGTVWAVGENVFGQLGDGTTSERRVPVQVQ 93

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTA 165
            LS       GA   H++ +  DG   A G     Q G G+  +   P+PV  L   V  
Sbjct: 94  GLSGVVAVAVGA--YHSLALRSDGTVWAVG-RAACQGGDGTASDCTVPAPVPGLSGGVAV 150

Query: 166 TACG-------ADFTVWL--SSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEA 216
            A G       +D TVW   S+ EG            QLG GT N        V L    
Sbjct: 151 AAGGLHSLALRSDGTVWAWGSNFEG------------QLGDGTTN--------VSLV--- 187

Query: 217 QPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVD 276
              P  +  L G  +V VA G  H++AV S G V+TWGF GYG LG        VP +V 
Sbjct: 188 ---PVRVKKLTG--VVAVAAGEKHSLAVRSDGTVWTWGFNGYGALGDGTTSSRKVPVQV- 241

Query: 277 VFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK--LKNNGDDWMYPKPLMDLSGWNLR 334
                  L     ++ G  +S      G ++ WG   +   GD     + L+ +    L 
Sbjct: 242 -----QGLSGGVAVAGGVYHSLAVRSDGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLS 296

Query: 335 CMDSGNMHH----FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +++    H     V  D +  +WG   YG LG     +  S +P +V  L G   ++V 
Sbjct: 297 GVEAVAAGHSLSLAVRFDGTVWAWGGNSYGALGNDTI-ETMSTVPVQVPGLSGG--VTVV 353

Query: 391 CGYGHSLVI 399
               H+L +
Sbjct: 354 AASSHALAV 362



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 103/250 (41%), Gaps = 42/250 (16%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            VA      H +AV  +G  + WG NE GQ+G G +  R  P  V  L         AG 
Sbjct: 449 VVAVAAGRYHSLAVRFDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGGV--AVAAGE 506

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
           +H++V+  DG   A+G N +GQLG+G   +   P  V+ L   V A A G  ++  L+  
Sbjct: 507 NHSLVLRSDGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGGV-AVAAGQYYS--LAVR 563

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTK--------DSSVKLA------------------ 213
              ++   GL   GQLG GT ++               V +A                  
Sbjct: 564 SDGTVWAWGLNFEGQLGDGTASDSPVPVRVQVPGLSGGVAVAAGTSHALVVRSDGTVWAW 623

Query: 214 ---YEAQ-----PRPRAIAALAGETI---VKVACGTNHTVAVDSKGYVYTWGFGGYGRLG 262
              Y+ Q     PR R +  +  + +   + VA G NH++AV S G V+ WG    G LG
Sbjct: 624 GSNYDGQVGEGAPRRRVLMPVQVQGLSEGMAVAAGYNHSLAVRSDGSVWAWGGNTAGVLG 683

Query: 263 HREQKDEWVP 272
                   VP
Sbjct: 684 DGTTDRRTVP 693



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 7/116 (6%)

Query: 49  RLRPLVGVDIRFVAAGCVSC----HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           R R L+ V ++ ++ G        H +AV  +G  + WG N  G LG G   +R  P   
Sbjct: 637 RRRVLMPVQVQGLSEGMAVAAGYNHSLAVRSDGSVWAWGGNTAGVLGDGTTDRRTVPVQA 696

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV 160
             L+    +   AG SH++V+  DG   A G N  GQ+G G    ++  +P R L+
Sbjct: 697 QGLTG--ARAVAAGESHSLVLRSDGTGWAMGSNASGQIGDGGPTQQVS-TPTRSLL 749


>gi|39104479|dbj|BAC65474.3| mKIAA0032 protein [Mus musculus]
          Length = 938

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 22/203 (10%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
           VSC   HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H
Sbjct: 32  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPLAQVAAGGAH 91

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVE 180
           +  ++  G    +G N  GQLG    ++   P  V+ L ++ V   +CG + T  L+   
Sbjct: 92  SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 151

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G     AG    GQLGH + N+              +  PR +  L G  + ++ACG  H
Sbjct: 152 GVFTFGAG--SCGQLGHDSVND--------------EVNPRRVLELMGSEVTQIACGRQH 195

Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
           T+A V S G +Y +G G  G+LG
Sbjct: 196 TLALVPSSGLIYAFGCGAKGQLG 218



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 76/154 (49%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V 
Sbjct: 70  SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 127

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEVT
Sbjct: 128 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVLELMGSEVT 187

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+ L    G  I   G    GQLG G
Sbjct: 188 QIACGRQHTLALVPSSGL-IYAFGCGAKGQLGTG 220



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
           P ++ +L++  I +   G  H + +  DG    +G N HGQLG G    ++  P  VR L
Sbjct: 18  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSL 77

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                A         +  S+ GA +   G+   GQLG   + +              +  
Sbjct: 78  EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 122

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  +  L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 123 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRV 178



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 90/190 (47%), Gaps = 16/190 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           PR I  L  +TI++V+CG  H +A+ + G  +TWG   +G+LG  +E   +  P+RV   
Sbjct: 18  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRV--- 74

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
            R+    P A ++AG  +S   +  G ++ WG + N G        D   P  +  L   
Sbjct: 75  -RSLEGIPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 132

Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  V   S    ++G    G+LG+     + +  P++V  L G  V  +A
Sbjct: 133 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVN--PRRVLELMGSEVTQIA 190

Query: 391 CGYGHSLVIV 400
           CG  H+L +V
Sbjct: 191 CGRQHTLALV 200



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 33/238 (13%)

Query: 140 GQLGSGSIRNEIE-PSPVRCLVSE-VTATACGADFTVW--LSSVEGASILNAGLPQYGQL 195
           GQLG  +  + +  P  ++ L  + +   +CG     W  L+          G   +GQL
Sbjct: 4   GQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGN----WHCLALAADGQFFTWGKNSHGQL 59

Query: 196 GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGF 255
           G G +             + +Q  P+ + +L G  + +VA G  H+ A+   G V+ WG 
Sbjct: 60  GLGKE-------------FPSQTSPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGM 106

Query: 256 GGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-----G 310
              G+LG  ++KD   P  V + +   V+     IS G  +++     G ++ +     G
Sbjct: 107 NNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGAGSCG 162

Query: 311 KLKNNG-DDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI--SWGHAQYGELGYG 365
           +L ++  +D + P+ +++L G  +  +  G  H      SS +  ++G    G+LG G
Sbjct: 163 QLGHDSVNDEVNPRRVLELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTG 220



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 52/113 (46%), Gaps = 3/113 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L    + +++ G    H   +   G  +T+G    GQLGH        P  V 
Sbjct: 122 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSVNDEVNPRRVL 179

Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           EL   ++ +   GR HT+ +V   G   AFG    GQLG+G   N   PSPV+
Sbjct: 180 ELMGSEVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPVK 232


>gi|402869930|ref|XP_003898996.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Papio anubis]
          Length = 932

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 22/203 (10%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
           VSC   HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVE 180
           +  ++  G    +G N  GQLG    ++   P  V+ L   +V   +CG + T  L+   
Sbjct: 84  SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G     AG    GQLGH + N+              +  PR +  L G  + ++ACG  H
Sbjct: 144 GVFTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187

Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
           T+A V S G +Y +G G  G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V 
Sbjct: 62  SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 119

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEVT
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 180 QIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 212



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
           P ++ +L++  I +   G  H + +  DG    +G N HGQLG G    ++  P  VR L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                A         +  S+ GA +   G+   GQLG   + +              +  
Sbjct: 70  EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 114

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  +  L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 170



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 16/190 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           PR I  L  +TI++V+CG  H +A+ + G  +TWG   +G+LG  +E   +  P+RV   
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
           +      P A ++AG  +S   +  G ++ WG + N G        D   P  +  L   
Sbjct: 70  EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  V   S    ++G    G+LG+     + +  P++V  L G  V  +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIA 182

Query: 391 CGYGHSLVIV 400
           CG  H+L  V
Sbjct: 183 CGRQHTLAFV 192



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 25/182 (13%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G +             + +Q  P+ + +L G  + +VA G  H+ A+   G V+
Sbjct: 48  HGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
            WG    G+LG  ++KD   P  V + +   V+     IS G  +++     G ++ +  
Sbjct: 95  GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150

Query: 310 ---GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
              G+L  ++ +D + P+ +++L G  +  +  G  H   FV +     ++G    G+LG
Sbjct: 151 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210

Query: 364 YG 365
            G
Sbjct: 211 TG 212



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L    + +++ G    H   +   G  +T+G    GQLGH        P  V 
Sbjct: 114 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 171

Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           EL   ++ +   GR HT+  V   G   AFG    GQLG+G   N   PSPV+
Sbjct: 172 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
           D    P+ +  L+   +  +  GN H   + AD    +WG   +G+LG G     S A P
Sbjct: 5   DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK-EFPSQASP 63

Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
           ++V  LEG+ +  VA G  HS  +
Sbjct: 64  QRVRSLEGIPLAQVAAGGAHSFAL 87


>gi|332233512|ref|XP_003265946.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Nomascus leucogenys]
          Length = 932

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 22/203 (10%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
           VSC   HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVE 180
           +  ++  G    +G N  GQLG    ++   P  V+ L   +V   +CG + T  L+   
Sbjct: 84  SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G     AG    GQLGH + N+              +  PR +  L G  + ++ACG  H
Sbjct: 144 GVFTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187

Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
           T+A V S G +Y +G G  G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V 
Sbjct: 62  SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 119

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEVT
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 180 QIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 212



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
           P ++ +L++  I +   G  H + +  DG    +G N HGQLG G    ++  P  VR L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                A         +  S+ GA +   G+   GQLG   + +              +  
Sbjct: 70  EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 114

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  +  L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 170



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 16/190 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           PR I  L  +TI++V+CG  H +A+ + G  +TWG   +G+LG  +E   +  P+RV   
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
           +      P A ++AG  +S   +  G ++ WG + N G        D   P  +  L   
Sbjct: 70  EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  V   S    ++G    G+LG+     + +  P++V  L G  V  +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIA 182

Query: 391 CGYGHSLVIV 400
           CG  H+L  V
Sbjct: 183 CGRQHTLAFV 192



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 25/182 (13%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G +             + +Q  P+ + +L G  + +VA G  H+ A+   G V+
Sbjct: 48  HGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
            WG    G+LG  ++KD   P  V + +   V+     IS G  +++     G ++ +  
Sbjct: 95  GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150

Query: 310 ---GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
              G+L  ++ +D + P+ +++L G  +  +  G  H   FV +     ++G    G+LG
Sbjct: 151 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210

Query: 364 YG 365
            G
Sbjct: 211 TG 212



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L    + +++ G    H   +   G  +T+G    GQLGH        P  V 
Sbjct: 114 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 171

Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           EL   ++ +   GR HT+  V   G   AFG    GQLG+G   N   PSPV+
Sbjct: 172 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
           D    P+ +  L+   +  +  GN H   + AD    +WG   +G+LG G     S A P
Sbjct: 5   DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK-EFPSQASP 63

Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
           ++V  LEG+ +  VA G  HS  +
Sbjct: 64  QRVRSLEGIPLAQVAAGGAHSFAL 87


>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
           [Pan troglodytes]
 gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
          Length = 1024

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++ +PS +  L ++ V   ACG   +  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  V V   +  L  E+  S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLGV--GRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325

Query: 193 GQLGHGTDNEYNTK-----DSSVKLAYEAQPRPRAIAALAG 228
           GQLG+G   +          SS +L  E+    + +  +AG
Sbjct: 326 GQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAG 366



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 43/280 (15%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           KI     G  H ++++ DG    +       L   SI  E           ++    CG 
Sbjct: 98  KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ LS  +G  +   G   +GQLG G               + +   P+ +  LAG  
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTTPQIVEHLAGVP 192

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           + +++ G  H++A+   G +Y+WG    G+  LGH E KD+  P  ++      V     
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKV----E 246

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++ G  +S+     G L+ +G  K      N+  + + P  + +L G+ +  +  G  H
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306

Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
              +V       S+G  + G+LG G  G +   MP  V +
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  + GQLG G                E++  P  I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNECGQLGLGHT--------------ESKDDPSLI 237

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
             L  + +  VACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R  + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---------NNGDDWMYPKPLMDLSG 330
                 P A ISAG  +S   +  G +Y WGK +          + DD   P  +  L  
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDN 242

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQI 300

Query: 390 ACGYGHSLVIV 400
           ACG  H+L  V
Sbjct: 301 ACGRWHTLAYV 311


>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
           [Pan paniscus]
 gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
 gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
          Length = 1057

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTQIACGRQHTSAFV 310



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++ +PS +  L ++ V   ACG   +  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  V V   +  L  E+  S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLGV--GRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325

Query: 193 GQLGHGTDNEYNTK-----DSSVKLAYEAQPRPRAIAALAG 228
           GQLG+G   +          SS +L  E+    + +  +AG
Sbjct: 326 GQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAG 366



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 43/280 (15%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           KI     G  H ++++ DG    +       L   SI  E           ++    CG 
Sbjct: 98  KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ LS  +G  +   G   +GQLG G               + +   P+ +  LAG  
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTTPQIVEHLAGVP 192

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           + +++ G  H++A+   G +Y+WG    G+  LGH E KD+  P  ++      V     
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKV----E 246

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++ G  +S+     G L+ +G  K      N+  + + P  + +L G+ +  +  G  H
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306

Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
              +V       S+G  + G+LG G  G +   MP  V +
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  + GQLG G                E++  P  I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNECGQLGLGHT--------------ESKDDPSLI 237

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
             L  + +  VACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R  + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---------NNGDDWMYPKPLMDLSG 330
                 P A ISAG  +S   +  G +Y WGK +          + DD   P  +  L  
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDN 242

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQI 300

Query: 390 ACGYGHSLVIV 400
           ACG  H+L  V
Sbjct: 301 ACGRWHTLAYV 311


>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
 gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
           Full=HECT domain and RCC1-like domain-containing protein
           4
 gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
 gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
          Length = 1057

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 34/351 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTD-------------CK 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVL-------PPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDDWMYPKPLMDL 328
              +   ++          A+   G V +    G GQL       N+    + P+ + +L
Sbjct: 237 KSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLG-----HNSTSHEINPRKVFEL 291

Query: 329 SGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
            G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 292 MGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSAFV 310



 Score = 46.2 bits (108), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
 gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
           Full=Cyclin-E-binding protein 1; AltName: Full=HECT
           domain and RCC1-like domain-containing protein 5
 gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
          Length = 1024

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 128/262 (48%), Gaps = 25/262 (9%)

Query: 59  RFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGA 117
           + +   C   H +A+   G  + WG+N  GQLG G K      P IV  L+   + +  A
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISA 198

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWL 176
           G +H++ ++  GN  ++G N+ GQLG G   ++ +PS +  L ++ V   ACG   +  L
Sbjct: 199 GEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALL 258

Query: 177 SSVEGASILNAGLPQYGQLGHG-TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVA 235
           +  +   +   G  ++GQLGH  T NE                RP  +A L G  + ++A
Sbjct: 259 T--QDGLLFTFGAGKHGQLGHNSTQNEL---------------RPCLVAELVGYRVTQIA 301

Query: 236 CGTNHTVA-VDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           CG  HT+A V   G V+++G G  G+LG+   +D+ +P  V V   +  L  E+  S   
Sbjct: 302 CGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKV-SSSEELKLESHTSEKE 360

Query: 295 VNSSCTAGGGQ-LYMWGKLKNN 315
           +     AGG Q + +W K +N+
Sbjct: 361 L--IMIAGGNQSILLWIKKENS 380



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 109/221 (49%), Gaps = 19/221 (8%)

Query: 18  KGGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEG 77
           KGGEL   G      +G   G    +  +P  +  L GV +  ++AG    H +A+ + G
Sbjct: 155 KGGELFAWGQNLHGQLGV--GRKFPSTTTPQIVEHLAGVPLAQISAG--EAHSMALSMSG 210

Query: 78  RCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWN 137
             Y+WG+NE GQLG G    +D P+++  L   K++    G SH+ ++T+DG    FG  
Sbjct: 211 NIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAG 270

Query: 138 KHGQLGSGSIRNEIEPSPVRCLVSE-----VTATACGADFTVWLSSVEGASILNAGLPQY 192
           KHGQLG  S +NE+ P    CLV+E     VT  ACG   T+   S  G  + + G  + 
Sbjct: 271 KHGQLGHNSTQNELRP----CLVAELVGYRVTQIACGRWHTLAYVSDLG-KVFSFGSGKD 325

Query: 193 GQLGHGTDNEYNTK-----DSSVKLAYEAQPRPRAIAALAG 228
           GQLG+G   +          SS +L  E+    + +  +AG
Sbjct: 326 GQLGNGGTRDQLMPLPVKVSSSEELKLESHTSEKELIMIAG 366



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 64/280 (22%), Positives = 113/280 (40%), Gaps = 43/280 (15%)

Query: 111 KIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGA 170
           KI     G  H ++++ DG    +       L   SI  E           ++    CG 
Sbjct: 98  KIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQE----------KKIIQITCGD 147

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             ++ LS  +G  +   G   +GQLG G               + +   P+ +  LAG  
Sbjct: 148 YHSLALS--KGGELFAWGQNLHGQLGVGR-------------KFPSTTTPQIVEHLAGVP 192

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGR--LGHREQKDEWVPRRVDVFQRNNVLPPEA 288
           + +++ G  H++A+   G +Y+WG    G+  LGH E KD+  P  ++      V     
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD--PSLIEGLDNQKV----E 246

Query: 289 VISAGSVNSSCTAGGGQLYMWGKLK------NNGDDWMYPKPLMDLSGWNLRCMDSGNMH 342
            ++ G  +S+     G L+ +G  K      N+  + + P  + +L G+ +  +  G  H
Sbjct: 247 FVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGYRVTQIACGRWH 306

Query: 343 H--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
              +V       S+G  + G+LG G  G +   MP  V +
Sbjct: 307 TLAYVSDLGKVFSFGSGKDGQLGNG--GTRDQLMPLPVKV 344



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 16/169 (9%)

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSG-SIRNEIEPSPVRCLVSEV 163
           S L + KI +   G  H++ +++ G   A+G N HGQLG G    +   P  V  L    
Sbjct: 133 SILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVP 192

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
            A     +      S+ G +I + G  + GQLG G                E++  P  I
Sbjct: 193 LAQISAGEAHSMALSMSG-NIYSWGKNECGQLGLGHT--------------ESKDDPSLI 237

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
             L  + +  VACG +H+  +   G ++T+G G +G+LGH   ++E  P
Sbjct: 238 EGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRP 286



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 84/191 (43%), Gaps = 20/191 (10%)

Query: 221 RAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVFQ 279
           R  + L  + I+++ CG  H++A+   G ++ WG   +G+LG  R+      P+ V+   
Sbjct: 130 RFESILQEKKIIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGRKFPSTTTPQIVEHLA 189

Query: 280 RNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---------NNGDDWMYPKPLMDLSG 330
                 P A ISAG  +S   +  G +Y WGK +          + DD   P  +  L  
Sbjct: 190 G----VPLAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDD---PSLIEGLDN 242

Query: 331 WNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISV 389
             +  +  G  H   +  D    ++G  ++G+LG+     ++   P  V  L G  V  +
Sbjct: 243 QKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHN--STQNELRPCLVAELVGYRVTQI 300

Query: 390 ACGYGHSLVIV 400
           ACG  H+L  V
Sbjct: 301 ACGRWHTLAYV 311


>gi|410110896|ref|NP_001258531.1| probable E3 ubiquitin-protein ligase HERC3 isoform 2 [Homo sapiens]
 gi|397480081|ref|XP_003811324.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Pan paniscus]
 gi|426344935|ref|XP_004039159.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
           [Gorilla gorilla gorilla]
 gi|194382994|dbj|BAG59053.1| unnamed protein product [Homo sapiens]
          Length = 932

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 98/203 (48%), Gaps = 22/203 (10%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKI-QRDRPTIVSELSKYKIKKAGAGRSH 121
           VSC   HC+A+  +G+ +TWG+N  GQLG G +   +  P  V  L    + +  AG +H
Sbjct: 24  VSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAH 83

Query: 122 TVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL-VSEVTATACGADFTVWLSSVE 180
           +  ++  G    +G N  GQLG    ++   P  V+ L   +V   +CG + T  L+   
Sbjct: 84  SFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSG 143

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
           G     AG    GQLGH + N+              +  PR +  L G  + ++ACG  H
Sbjct: 144 GVFTFGAG--SCGQLGHDSMND--------------EVNPRRVLELMGSEVTQIACGRQH 187

Query: 241 TVA-VDSKGYVYTWGFGGYGRLG 262
           T+A V S G +Y +G G  G+LG
Sbjct: 188 TLAFVPSSGLIYAFGCGARGQLG 210



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/154 (38%), Positives = 75/154 (48%), Gaps = 4/154 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP R+R L G+ +  VAAG    H  A+ + G  + WG N  GQLG  D+  R+ P  V 
Sbjct: 62  SPQRVRSLEGIPLAQVAAG--GAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVK 119

Query: 106 ELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVT 164
            L   K+     G  HT V+T+ G    FG    GQLG  S+ +E+ P  V  L+ SEVT
Sbjct: 120 LLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVT 179

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
             ACG   T+      G  I   G    GQLG G
Sbjct: 180 QIACGRQHTLAFVPSSGL-IYAFGCGARGQLGTG 212



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 16/176 (9%)

Query: 101 PTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL 159
           P ++ +L++  I +   G  H + +  DG    +G N HGQLG G    ++  P  VR L
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
                A         +  S+ GA +   G+   GQLG   + +              +  
Sbjct: 70  EGIPLAQVAAGGAHSFALSLSGA-VFGWGMNNAGQLGLSDEKD--------------RES 114

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  +  L  + +V ++CG  HT  +   G V+T+G G  G+LGH    DE  PRRV
Sbjct: 115 PCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRV 170



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 16/190 (8%)

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-REQKDEWVPRRVDVF 278
           PR I  L  +TI++V+CG  H +A+ + G  +TWG   +G+LG  +E   +  P+RV   
Sbjct: 10  PRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSL 69

Query: 279 QRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGD-------DWMYPKPLMDLSGW 331
           +      P A ++AG  +S   +  G ++ WG + N G        D   P  +  L   
Sbjct: 70  EG----IPLAQVAAGGAHSFALSLSGAVFGWG-MNNAGQLGLSDEKDRESPCHVKLLRTQ 124

Query: 332 NLRCMDSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVA 390
            +  +  G  H  V   S    ++G    G+LG+     + +  P++V  L G  V  +A
Sbjct: 125 KVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVN--PRRVLELMGSEVTQIA 182

Query: 391 CGYGHSLVIV 400
           CG  H+L  V
Sbjct: 183 CGRQHTLAFV 192



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 25/182 (13%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G +             + +Q  P+ + +L G  + +VA G  H+ A+   G V+
Sbjct: 48  HGQLGLGKE-------------FPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVF 94

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMW-- 309
            WG    G+LG  ++KD   P  V + +   V+     IS G  +++     G ++ +  
Sbjct: 95  GWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVV----YISCGEEHTAVLTKSGGVFTFGA 150

Query: 310 ---GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELG 363
              G+L  ++ +D + P+ +++L G  +  +  G  H   FV +     ++G    G+LG
Sbjct: 151 GSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLG 210

Query: 364 YG 365
            G
Sbjct: 211 TG 212



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 3/113 (2%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           SP  ++ L    + +++ G    H   +   G  +T+G    GQLGH        P  V 
Sbjct: 114 SPCHVKLLRTQKVVYISCG--EEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVL 171

Query: 106 ELSKYKIKKAGAGRSHTV-VVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVR 157
           EL   ++ +   GR HT+  V   G   AFG    GQLG+G   N   PSPV+
Sbjct: 172 ELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVK 224



 Score = 39.3 bits (90), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 317 DDWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSAMP 375
           D    P+ +  L+   +  +  GN H   + AD    +WG   +G+LG G     S A P
Sbjct: 5   DSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGK-EFPSQASP 63

Query: 376 KKVDILEGMHVISVACGYGHSLVI 399
           ++V  LEG+ +  VA G  HS  +
Sbjct: 64  QRVRSLEGIPLAQVAAGGAHSFAL 87


>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
 gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
          Length = 1205

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 158/349 (45%), Gaps = 49/349 (14%)

Query: 58  IRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGA 117
           IR  A G    H +A++  G  + WG    GQLG+G       P  V +L  + ++   A
Sbjct: 41  IRMAAGG--ESHTLALNANGTVWAWGG---GQLGNGSTTGSPAPVQVQDL--HSVEAIAA 93

Query: 118 GRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLS 177
           G SH + +  DG   A+G+N +GQLG GS      P  V  L S V A A   D ++ L 
Sbjct: 94  GGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTGRNTPVQVEGLRSIVGA-AAHYDHSLALK 152

Query: 178 SVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACG 237
           S    ++   G  +YGQLG G+  + +T              P  +  L  +++V ++ G
Sbjct: 153 S--DGTVWAWGRNEYGQLGDGSKTDRHT--------------PVRVKGL--DSVVAISSG 194

Query: 238 TNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNS 297
             +++AV S G V+ WG   YG+LG+        P +V        L     +++G  ++
Sbjct: 195 FGYSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQV------QGLHSVTAVASGDYHN 248

Query: 298 SCTAGGGQLYMW-----GKLKNNGD-DWMYPKPLMDLSGWNLRCMDSGNMHHF-VGADSS 350
                 G ++ W     G+L +  D D   P  +   S  +   +D+G  H   + +D +
Sbjct: 249 LAIKRDGTVWSWGPNLAGQLGDGSDMDRYTPVQVEGFS--SAVDVDAGFGHSLALKSDGT 306

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
             +WG+ Q+ E G+G      S+ P +V  L+   V+ +A G  HSL +
Sbjct: 307 VWAWGNYQFNEWGFG------SSTPVQVQELDS--VVDIAAGTQHSLAV 347



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 116/258 (44%), Gaps = 37/258 (14%)

Query: 60  FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGR 119
            V A     H +A+  +G  + WGRNE GQLG G K  R  P  V  L       +G G 
Sbjct: 138 IVGAAAHYDHSLALKSDGTVWAWGRNEYGQLGDGSKTDRHTPVRVKGLDSVVAISSGFG- 196

Query: 120 SHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSV 179
            +++ V  DG   A+G N++GQLG+GS      P  V+ L S VTA A G D+   L+  
Sbjct: 197 -YSLAVKSDGTVWAWGKNEYGQLGNGSTTQSSAPVQVQGLHS-VTAVASG-DYHN-LAIK 252

Query: 180 EGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
              ++ + G    GQLG G+D +  T              P  +   +  + V V  G  
Sbjct: 253 RDGTVWSWGPNLAGQLGDGSDMDRYT--------------PVQVEGFS--SAVDVDAGFG 296

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEW---VPRRVDVFQRNNVLPPEAVISAGSVN 296
           H++A+ S G V+ WG           Q +EW       V V + ++V+     I+AG+ +
Sbjct: 297 HSLALKSDGTVWAWG---------NYQFNEWGFGSSTPVQVQELDSVVD----IAAGTQH 343

Query: 297 SSCTAGGGQLYMWGKLKN 314
           S      G ++ WGK  N
Sbjct: 344 SLAVRNDGTVWAWGKNDN 361


>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
          Length = 1027

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 26/236 (11%)

Query: 48  TRLRP--LVGVDIR-FVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTI 103
           +R +P  +V +D +  VA  C   H +A++ +G+ Y WG +  GQLG     +  R P  
Sbjct: 71  SRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRN 130

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGS-IRNEIEPSPVRCL--V 160
           +  LS  +I +   G  H++ +++      +G NK+GQLG G+  + +  P  ++ L  +
Sbjct: 131 IKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLLGI 190

Query: 161 SEVTATACGA-DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
             +   A GA  F + LS     +I   G  ++GQLG   +N+                 
Sbjct: 191 PFMQVAAGGAHSFVLTLS----GAIFGWGRNKFGQLGLNDENDRYV-------------- 232

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
           P  + +L  + IV + CG +HT A+  +G V+T+G GGYG+LGH     E  PR+V
Sbjct: 233 PNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKV 288



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 152/350 (43%), Gaps = 32/350 (9%)

Query: 38  GALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQ 97
           G +D  +V   R      ++ R    GC   H V V  +G  YT G N+ GQLGH  +  
Sbjct: 15  GGIDEEIVLEPRKSDFF-INKRVRDVGCGLRHTVFVLDDGTVYTCGCNDLGQLGH--EKS 71

Query: 98  RDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLG-SGSIRNEIEPSPV 156
           R +P  V  L    I     G +HT+ + + G   A+G +  GQLG  GS      P  +
Sbjct: 72  RKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLVGSEECIRVPRNI 131

Query: 157 RCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYE 215
           + L   ++   ACG   ++ LS  + + +   G  +YGQLG GTD              +
Sbjct: 132 KSLSDIQIVQVACGYYHSLALS--KASEVFCWGQNKYGQLGLGTDC-------------K 176

Query: 216 AQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRV 275
            Q  P+ + +L G   ++VA G  H+  +   G ++ WG   +G+LG  ++ D +VP  +
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQLGLNDENDRYVPNLL 236

Query: 276 DVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYM-----WGKL-KNNGDDWMYPKPLMDLS 329
              +   ++     I  G  +++     G ++      +G+L  N+    + P+ + +L 
Sbjct: 237 KSLRSQKIV----YICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHEINPRKVFELM 292

Query: 330 GWNLRCMDSGNMH--HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKK 377
           G  +  +  G  H   FV +     S+G    G+LG G    + S    K
Sbjct: 293 GSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVK 342



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 144/330 (43%), Gaps = 34/330 (10%)

Query: 82  WGRNERGQLGHG--DKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           WG    GQLG G  D+     P         +++  G G  HTV V +DG     G N  
Sbjct: 4   WGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCGCNDL 63

Query: 140 GQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           GQLG    R   +P  V  L ++ + A +CG   T+ L+  +   +   GL   GQLG  
Sbjct: 64  GQLGHEKSRK--KPEQVVALDAQNIVAVSCGEAHTLALN--DKGQVYAWGLDSDGQLGLV 119

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
              E       +++       PR I +L+   IV+VACG  H++A+     V+ WG   Y
Sbjct: 120 GSEE------CIRV-------PRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKY 166

Query: 259 GRLGH-REQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
           G+LG   + K +  P+ +    ++ +  P   ++AG  +S      G ++ WG+ K    
Sbjct: 167 GQLGLGTDCKKQTSPQLL----KSLLGIPFMQVAAGGAHSFVLTLSGAIFGWGRNKFGQL 222

Query: 314 --NNGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQK 370
             N+ +D   P  L  L    +  +  G  H   +  +    ++G   YG+LG+     +
Sbjct: 223 GLNDENDRYVPNLLKSLRSQKIVYICCGEDHTAALTKEGGVFTFGAGGYGQLGHNSTSHE 282

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSLVIV 400
            +  P+KV  L G  V  +ACG  H+   V
Sbjct: 283 IN--PRKVFELMGSIVTEIACGRQHTSTFV 310



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 49/214 (22%), Positives = 75/214 (35%), Gaps = 64/214 (29%)

Query: 192 YGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVY 251
           +GQLG G  +E            E    PR       + +  V CG  HTV V   G VY
Sbjct: 9   FGQLGLGGIDE------------EIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY 56

Query: 252 TWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           T G    G+LGH + + +                PE V++  + N    + G        
Sbjct: 57  TCGCNDLGQLGHEKSRKK----------------PEQVVALDAQNIVAVSCG-------- 92

Query: 312 LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKS 371
                                L   D G ++          +WG    G+LG     ++ 
Sbjct: 93  -----------------EAHTLALNDKGQVY----------AWGLDSDGQLGLVG-SEEC 124

Query: 372 SAMPKKVDILEGMHVISVACGYGHSLVIVDRTNV 405
             +P+ +  L  + ++ VACGY HSL +   + V
Sbjct: 125 IRVPRNIKSLSDIQIVQVACGYYHSLALSKASEV 158



 Score = 38.1 bits (87), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 16/50 (32%), Positives = 27/50 (54%)

Query: 352 ISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           + WG+A +G+LG G   ++    P+K D      V  V CG  H++ ++D
Sbjct: 2   LCWGNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLD 51


>gi|27695022|gb|AAH43960.1| LOC398469 protein, partial [Xenopus laevis]
          Length = 589

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 22/268 (8%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPT-I 103
           + P RL  L G  I  ++ G    H +  + +G  Y+WG N   QLG+G+ IQ   P  +
Sbjct: 122 IMPRRLDVLCGKKIVDLSYG-SGPHILLCNEDGEVYSWGHNGYSQLGNGNTIQGTTPVQV 180

Query: 104 VSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEV 163
             EL   K+ +   G  H++ +T DG   ++G+N  GQ+GSG+  N+  P  V   +   
Sbjct: 181 CMELLSKKVIQVACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSK 240

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              +  A  T  ++  +   +   G    GQLG G     NT +         Q  P  +
Sbjct: 241 VVVSISAGQTSSMALTDNGHVYGWGYNGTGQLGLG-----NTGN---------QLMPCRL 286

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
                  I++V  G  HT+A+  +G +Y WG   +G+LG   + ++ VP +V   +R   
Sbjct: 287 VFAQPICIIQVVLGYAHTLALSDQGVLYAWGANSHGQLGIGNKSNQTVPVKVGTNER--- 343

Query: 284 LPPEAVISAGSVN-SSCTAGGGQLYMWG 310
                V +  S N S+  +   Q+YMWG
Sbjct: 344 --MVEVTACHSTNISAAKSQSEQVYMWG 369



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 29/278 (10%)

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLV-SEVTATACGADFTV 174
           G   +  +  T++     FG N    LG+G  ++ I P  +  L   ++   + G+   +
Sbjct: 87  GCSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIVDLSYGSGPHI 146

Query: 175 WLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKV 234
            L + +G  + + G   Y QLG+G   +  T    V++  E          L  + +++V
Sbjct: 147 LLCNEDG-EVYSWGHNGYSQLGNGNTIQGTTP---VQVCME----------LLSKKVIQV 192

Query: 235 ACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGS 294
           ACG++H++A+ S G V++WG+   G++G     ++ VPR+V    ++ V+     ISAG 
Sbjct: 193 ACGSHHSMALTSDGEVFSWGYNNCGQVGSGTTANQSVPRKVASSLQSKVV---VSISAGQ 249

Query: 295 VNSSCTAGGGQLYMWGK-------LKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGA 347
            +S      G +Y WG        L N G+  M P  L+      +  +  G  H    +
Sbjct: 250 TSSMALTDNGHVYGWGYNGTGQLGLGNTGNQLM-PCRLVFAQPICIIQVVLGYAHTLALS 308

Query: 348 DSSCI-SWGHAQYGELGYGPYGQKSSAMPKKVDILEGM 384
           D   + +WG   +G+LG G   + +  +P KV   E M
Sbjct: 309 DQGVLYAWGANSHGQLGIG--NKSNQTVPVKVGTNERM 344



 Score = 41.6 bits (96), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 42/179 (23%), Positives = 76/179 (42%), Gaps = 14/179 (7%)

Query: 236 CGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSV 295
           C  N  +       V+ +G      LG  + +   +PRR+DV     ++  +    +G  
Sbjct: 88  CSANEAIYTTQNNEVFVFGMNISSCLGTGDNQSTIMPRRLDVLCGKKIV--DLSYGSGPH 145

Query: 296 NSSCTAGGGQLYMWG----KLKNNGDDWMYPKPL---MDLSGWNLRCMDSGNMHHF-VGA 347
              C    G++Y WG        NG+      P+   M+L    +  +  G+ H   + +
Sbjct: 146 ILLCNE-DGEVYSWGHNGYSQLGNGNTIQGTTPVQVCMELLSKKVIQVACGSHHSMALTS 204

Query: 348 DSSCISWGHAQYGELGYGPYGQKSSAMPKKV-DILEGMHVISVACGYGHSLVIVDRTNV 405
           D    SWG+   G++G G    +S  +P+KV   L+   V+S++ G   S+ + D  +V
Sbjct: 205 DGEVFSWGYNNCGQVGSGTTANQS--VPRKVASSLQSKVVVSISAGQTSSMALTDNGHV 261


>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
           CCMP2712]
          Length = 413

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 32/299 (10%)

Query: 57  DIRFVAAGCVSC--HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKK 114
           D + V   C +   H + V   G+ Y+ G N  GQLG G         +V  L   ++  
Sbjct: 133 DCKVVQVSCFNGAEHVLVVTSAGQVYSCGCNNHGQLGLGSTKMSPSLLLVESLKHVRVLS 192

Query: 115 AGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE--VTATACGADF 172
           A     H+VVV+ DG++ +FG N  GQLG G+  N++ P  V  L S   V   ACG   
Sbjct: 193 ASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVE-LPSPHLVRLAACGQYH 251

Query: 173 TVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIV 232
           T++L+  E   + + G    GQLG G+ +  N               P  IAAL      
Sbjct: 252 TIFLT--EEGMVFSCGKNLNGQLGLGSRSSTNV--------------PTLIAALQERPAS 295

Query: 233 KVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISA 292
            +ACG +HT  V   G ++T+G+   G+LG         P +V+  +   V+     IS 
Sbjct: 296 MIACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVK----ISC 351

Query: 293 GSVNSSCTAGGGQLYMW-----GKL-KNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFV 345
           G+  +   +  G+L+ +     G+L   +  D + P  +  ++  NL  +  G  HH V
Sbjct: 352 GTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNLSEIACG-FHHLV 409



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 17/240 (7%)

Query: 45  VSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIV 104
           +SP+ L       +R ++A C   H V V  +G  +++G N+ GQLG G +  +  P  V
Sbjct: 175 MSPSLLLVESLKHVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRV 234

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-V 163
              S + ++ A  G+ HT+ +TE+G   + G N +GQLG GS  +   P+ +  L     
Sbjct: 235 ELPSPHLVRLAACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPA 294

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
           +  ACG   T  +  +E   +   G    GQLG G  +  ++              P  +
Sbjct: 295 SMIACGYSHTCVV--LEDGKLFTFGYNHQGQLGLGHTDSVSS--------------PMQV 338

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L    +VK++CGT+ T  +   G ++++G   +G+LG  +  D  VP  V    + N+
Sbjct: 339 ETLRNVKVVKISCGTHFTCVLSESGELWSFGCNCHGQLGLGDSTDRLVPVLVPSMTKKNL 398



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 89/184 (48%), Gaps = 17/184 (9%)

Query: 63  AGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           A C   H + +  EG  ++ G+N  GQLG G +   + PT+++ L +        G SHT
Sbjct: 245 AACGQYHTIFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHT 304

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEG 181
            VV EDG    FG+N  GQLG G   +   P  V  L + +V   +CG  FT  LS  E 
Sbjct: 305 CVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKVVKISCGTHFTCVLS--ES 362

Query: 182 ASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHT 241
             + + G   +GQLG G        DS+ +L       P  + ++  + + ++ACG +H 
Sbjct: 363 GELWSFGCNCHGQLGLG--------DSTDRLV------PVLVPSMTKKNLSEIACGFHHL 408

Query: 242 VAVD 245
           VA+ 
Sbjct: 409 VAIS 412



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 150/351 (42%), Gaps = 51/351 (14%)

Query: 76  EGRC--YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLA 133
           EG C  +  G+N +G+LGH    ++   ++V  L + +I K  AG   +  +TE+G    
Sbjct: 37  EGDCGVFACGQNRKGELGHSTFREQVEMSLVQSLRRKRIVKVAAGSETSYFLTEEGKVYC 96

Query: 134 FGWNKHGQL------GSGSIRNE-------IEPSPVRCLVSEVTATACGADFTVWLSSVE 180
            G N  GQL      GS +   E       +E  P  C V +V+    GA+  + ++S  
Sbjct: 97  CGLNSTGQLARETHQGSANRSKEYSSDIELMEGLPPDCKVVQVSCFN-GAEHVLVVTS-- 153

Query: 181 GASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNH 240
              + + G   +GQLG G+     TK S   L  E+    R ++A         +C  +H
Sbjct: 154 AGQVYSCGCNNHGQLGLGS-----TKMSPSLLLVESLKHVRVLSA---------SCSYHH 199

Query: 241 TVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI---SAGSVNS 297
           +V V S G  +++G    G+LG   + ++ +P RV+       LP   ++   + G  ++
Sbjct: 200 SVVVSSDGSAFSFGLNDCGQLGIGTRPNQLLPHRVE-------LPSPHLVRLAACGQYHT 252

Query: 298 SCTAGGGQLYMWGKLKN------NGDDWMYPKPLMDLSGWNLRCMDSGNMHH-FVGADSS 350
                 G ++  GK  N      +      P  +  L       +  G  H   V  D  
Sbjct: 253 IFLTEEGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQERPASMIACGYSHTCVVLEDGK 312

Query: 351 CISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             ++G+   G+LG G     SS  P +V+ L  + V+ ++CG   + V+ +
Sbjct: 313 LFTFGYNHQGQLGLGHTDSVSS--PMQVETLRNVKVVKISCGTHFTCVLSE 361


>gi|302806118|ref|XP_002984809.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
 gi|300147395|gb|EFJ14059.1| hypothetical protein SELMODRAFT_234638 [Selaginella moellendorffii]
          Length = 391

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 141/327 (43%), Gaps = 31/327 (9%)

Query: 82  WGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQ 141
           WG  E GQLG G+   +D   +V  L  + +    AG  +++ + EDG    +GWN+ G 
Sbjct: 10  WGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGT 69

Query: 142 LG-SGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTD 200
           LG     + E  PS V+ L +     A    +       EG +    G  +YGQ      
Sbjct: 70  LGHPPETKTESTPSQVKALANVKIVQAAIGGWHCLAVDEEGRTYAWGG-NEYGQCA---- 124

Query: 201 NEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGR 260
            E  TK+   K   +   R   I       +  VA G  H+V +  +G+V+TWG      
Sbjct: 125 EEQQTKEQQNKGESKVLHRDITIPQRCAPRLC-VAAGGTHSVVLTEEGHVWTWG------ 177

Query: 261 LGHREQKDEWVP---RRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLK---- 313
                    W P   +++ V  R   L    +I+ G+ ++      G+++ WG  +    
Sbjct: 178 -------QPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQL 230

Query: 314 NNGDDW--MYPKPLMDLSGWNLRCMDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQK 370
             GD      P P+  L+G  L  + +G  H   +  D +   WG  ++G LG+G   + 
Sbjct: 231 GTGDTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGD-DKS 289

Query: 371 SSAMPKKVDILEGMHVISVACGYGHSL 397
           S  +P+KV +L G  V+ V+CG  HS+
Sbjct: 290 SKMLPQKVHLLAGEPVVQVSCGGTHSV 316



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/280 (28%), Positives = 127/280 (45%), Gaps = 45/280 (16%)

Query: 46  SPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVS 105
           +P++++ L   +++ V A     HC+AVD EGR Y WG NE GQ     + +  +    S
Sbjct: 81  TPSQVKALA--NVKIVQAAIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGES 138

Query: 106 ELSKYKIKK---------AGAGRSHTVVVTEDGNSLAFG--WNKHGQLGSGSIRNEIEPS 154
           ++    I             AG +H+VV+TE+G+   +G  W        G I+    P 
Sbjct: 139 KVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGHVWTWGQPWPP------GDIKQISVPV 192

Query: 155 PVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAY 214
            V+ L   VT  A GA     L+ V+   +   G  +YGQLG G                
Sbjct: 193 RVQGL-ENVTMIAVGAFHN--LALVQHGEVWAWGNNEYGQLGTG---------------- 233

Query: 215 EAQPR--PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQK-DEWV 271
           + QPR  P  +  L G  +V +A G  H++A+   G VY WG G +GRLG  + K  + +
Sbjct: 234 DTQPRSSPVPVKGLTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKML 293

Query: 272 PRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK 311
           P++V +        P   +S G  +S      G+++ +G+
Sbjct: 294 PQKVHLLAGE----PVVQVSCGGTHSVAATISGRMFSFGR 329



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/275 (27%), Positives = 121/275 (44%), Gaps = 24/275 (8%)

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSE-VTATACGADFTVWLSSVEGASILNAGLP 190
           LA+G  + GQLG G+++++     V  L    V +   G+  +  L+  E   +   G  
Sbjct: 8   LAWGAGEDGQLGLGNLQDKDSVCVVDALRDHNVVSVVAGSRNS--LAICEDGRLFTWGWN 65

Query: 191 QYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYV 250
           Q G LGH  + +  +  S VK             ALA   IV+ A G  H +AVD +G  
Sbjct: 66  QRGTLGHPPETKTESTPSQVK-------------ALANVKIVQAAIGGWHCLAVDEEGRT 112

Query: 251 YTWGFGGYGRLGHREQKDEWVPR-RVDVFQRNNVLP----PEAVISAGSVNSSCTAGGGQ 305
           Y WG   YG+    +Q  E   +    V  R+  +P    P   ++AG  +S      G 
Sbjct: 113 YAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRCAPRLCVAAGGTHSVVLTEEGH 172

Query: 306 LYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCI-SWGHAQYGELGY 364
           ++ WG+    GD      P+      N+  +  G  H+        + +WG+ +YG+LG 
Sbjct: 173 VWTWGQPWPPGDIKQISVPVRVQGLENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGT 232

Query: 365 GPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVI 399
           G    +SS +P  V  L G+ ++ +A G  HS+ +
Sbjct: 233 GDTQPRSSPVP--VKGLTGLVLVDIAAGGWHSMAL 265



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 112/249 (44%), Gaps = 31/249 (12%)

Query: 40  LDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRD 99
           L  ++  P R  P +      VAAG    H V +  EG  +TWG+        GD  Q  
Sbjct: 141 LHRDITIPQRCAPRL-----CVAAG--GTHSVVLTEEGHVWTWGQ----PWPPGDIKQIS 189

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
            P  V  L    +   GA   H + + + G   A+G N++GQLG+G  +    P PV+ L
Sbjct: 190 VPVRVQGLENVTMIAVGA--FHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKGL 247

Query: 160 VSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPR 219
              V        +     + +GA +   G  ++G+LG G D       SS  L       
Sbjct: 248 TGLVLVDIAAGGWHSMALTPDGA-VYGWGRGEHGRLGFGDDK------SSKML------- 293

Query: 220 PRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV-- 277
           P+ +  LAGE +V+V+CG  H+VA    G ++++G G +GRLG+        P  V V  
Sbjct: 294 PQKVHLLAGEPVVQVSCGGTHSVAATISGRMFSFGRGDHGRLGYGGAVTTGHPVEVPVSL 353

Query: 278 --FQRNNVL 284
             + R+N++
Sbjct: 354 HHYSRHNIV 362



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 144/345 (41%), Gaps = 51/345 (14%)

Query: 57  DIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDR-PTIVSELSKYKIKKA 115
           D   V+    S + +A+  +GR +TWG N+RG LGH  + + +  P+ V  L+  KI +A
Sbjct: 37  DHNVVSVVAGSRNSLAICEDGRLFTWGWNQRGTLGHPPETKTESTPSQVKALANVKIVQA 96

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKHGQL------------GSGSIRNEIEPSPVRCLVSEV 163
             G  H + V E+G + A+G N++GQ             G   + +     P RC  +  
Sbjct: 97  AIGGWHCLAVDEEGRTYAWGGNEYGQCAEEQQTKEQQNKGESKVLHRDITIPQRC--APR 154

Query: 164 TATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAI 223
              A G   +V L+  E   +   G P             + K  SV         P  +
Sbjct: 155 LCVAAGGTHSVVLT--EEGHVWTWGQPW---------PPGDIKQISV---------PVRV 194

Query: 224 AALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNV 283
             L  E +  +A G  H +A+   G V+ WG   YG+LG  + +    PR   V  +   
Sbjct: 195 QGL--ENVTMIAVGAFHNLALVQHGEVWAWGNNEYGQLGTGDTQ----PRSSPVPVKGLT 248

Query: 284 LPPEAVISAGSVNSSCTAGGGQLYMWGKLKNN----GDDW---MYPKPLMDLSGWNLRCM 336
                 I+AG  +S      G +Y WG+ ++     GDD    M P+ +  L+G  +  +
Sbjct: 249 GLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVVQV 308

Query: 337 DSGNMHHFVGADSS-CISWGHAQYGELGYGPYGQKSSAMPKKVDI 380
             G  H      S    S+G   +G LGYG  G  ++  P +V +
Sbjct: 309 SCGGTHSVAATISGRMFSFGRGDHGRLGYG--GAVTTGHPVEVPV 351



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 12/206 (5%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P R++ L  V +  V A     H +A+   G  + WG NE GQLG GD   R  P  V  
Sbjct: 191 PVRVQGLENVTMIAVGA----FHNLALVQHGEVWAWGNNEYGQLGTGDTQPRSSPVPVKG 246

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIR-NEIEPSPVRCLVSE-VT 164
           L+   +    AG  H++ +T DG    +G  +HG+LG G  + +++ P  V  L  E V 
Sbjct: 247 LTGLVLVDIAAGGWHSMALTPDGAVYGWGRGEHGRLGFGDDKSSKMLPQKVHLLAGEPVV 306

Query: 165 ATACGADFTVWLSSVEGASILNAGLPQYGQLGH-GTDNEYNTKDSSVKLAYEAQPRPRAI 223
             +CG   +V  ++     + + G   +G+LG+ G     +  +  V L + ++    + 
Sbjct: 307 QVSCGGTHSV--AATISGRMFSFGRGDHGRLGYGGAVTTGHPVEVPVSLHHYSRHNIVSE 364

Query: 224 AALAGET--IVK-VACGTNHTVAVDS 246
               G T  +VK VACG  H +AV S
Sbjct: 365 DEANGSTRWVVKLVACGGRHALAVAS 390


>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
           [Anolis carolinensis]
          Length = 788

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 129/319 (40%), Gaps = 78/319 (24%)

Query: 18  KGGELLFCGSTCWDAVGR-RKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAVDVE 76
           + G+L   GS  W  +G   K A++     PT ++ L    ++  A  C   H +    +
Sbjct: 52  ENGKLYMFGSNNWGQLGFGSKNAVN----KPTCVKALKPEKVKLAA--CGRNHTLICTEQ 105

Query: 77  GRCYTWGRNERGQLGHGDKIQRDRPTIVSELSK-YKIKKAGAGRSHTVVVTEDGNSLAFG 135
           G  Y  G N  GQLG GD  +R    ++S  +K +KIK+  AG   + V+TEDG  + +G
Sbjct: 106 GNVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQHKIKQLAAGSYTSAVLTEDGQLVMWG 165

Query: 136 WNKHGQLGSG-------------------------------------------------- 145
            N  GQ+G G                                                  
Sbjct: 166 DNSEGQIGLGDKAYVSVPHQVDIGKPVSCISCGYYHSALITQDGELYTFGEPENGKLGLS 225

Query: 146 --SIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEY 203
              ++N   P  V  +  +V+  ACG   TV L+      +   GL QYGQLGHGT    
Sbjct: 226 PKQLKNHKLPQLVSGISGKVSKVACGGGHTVVLAE---GDVYTFGLGQYGQLGHGT---- 278

Query: 204 NTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH 263
                     +E    P+ +  L    I  +ACG NHT  +   G +YT+G G +G+LG 
Sbjct: 279 --------FVFETS-EPKTVDHLGKHKICHIACGENHTALITENGLMYTFGDGRHGKLGL 329

Query: 264 REQK--DEWVPRRVDVFQR 280
            E+   +++VP     F R
Sbjct: 330 GEENYTNQFVPTLCSNFLR 348



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 142/342 (41%), Gaps = 75/342 (21%)

Query: 66  VSC---HCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHT 122
           +SC   H   V   G+ Y +G N  GQLG G K   ++PT V  L   K+K A  GR+HT
Sbjct: 40  ISCGDEHTSVVTENGKLYMFGSNNWGQLGFGSKNAVNKPTCVKALKPEKVKLAACGRNHT 99

Query: 123 VVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
           ++ TE GN  A G N  GQLG G    + E      L+S  T           +  +   
Sbjct: 100 LICTEQGNVYAAGGNSEGQLGLG----DTEERSTFHLISFFTKQH-------KIKQLAAG 148

Query: 183 SILNAGLPQYGQL---GHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           S  +A L + GQL   G  ++ +    D     AY + P    I    G+ +  ++CG  
Sbjct: 149 SYTSAVLTEDGQLVMWGDNSEGQIGLGDK----AYVSVPHQVDI----GKPVSCISCGYY 200

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSC 299
           H+  +   G +YT+G    G+LG         P+++    +N+ LP      +G V S  
Sbjct: 201 HSALITQDGELYTFGEPENGKLG-------LSPKQL----KNHKLPQLVSGISGKV-SKV 248

Query: 300 TAGGGQLYMWGKLKNNGDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQY 359
             GGG                                     H  V A+    ++G  QY
Sbjct: 249 ACGGG-------------------------------------HTVVLAEGDVYTFGLGQY 271

Query: 360 GELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
           G+LG+G +  ++S  PK VD L    +  +ACG  H+ +I +
Sbjct: 272 GQLGHGTFVFETSE-PKTVDHLGKHKICHIACGENHTALITE 312


>gi|408501216|ref|YP_006865135.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
 gi|408466040|gb|AFU71569.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
          Length = 1086

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 159/378 (42%), Gaps = 55/378 (14%)

Query: 49  RLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQR---------D 99
           +  P +  D  +V       H +A+  +G  Y WG N +GQLG G    R         D
Sbjct: 611 KTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVQGQLGDGTGTGRNTPVRVKTPD 670

Query: 100 RPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQLGSGSIRNEIEPSPVRCL 159
           R T     + +   +  AG  H++ +  DGN+ A+G+N +GQLG G+  N+   +PVR  
Sbjct: 671 RKTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVNGQLGGGT-SNDYRRTPVRVE 729

Query: 160 VSE-VTATACGADFT-VWLS-----SVEGASILNA---GLPQYGQLGHGTDNEYNTK--- 206
             +  T     ADFT V +S     S+   S  NA   G    GQLG GT    NT    
Sbjct: 730 TPDRKTYPDLPADFTYVQVSAGRYHSLALGSDGNAWAWGSNFEGQLGDGTGTNRNTPVMV 789

Query: 207 DSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGH-RE 265
            +  +  Y   P        A  T V+V+ G  H++A+ S G  + WG    G+LG    
Sbjct: 790 KTPDRSTYPDLP--------ADFTYVQVSAGWLHSLALGSDGNAWAWGRNTNGQLGDGTS 841

Query: 266 QKDEWVPRRVDVFQRNNV--LPPE---AVISAGSVNSSCTAGGGQLYMW-----GKLKNN 315
             D   P RV +  RN    LP +   A +SA   +S      G  + W     G L NN
Sbjct: 842 GTDRTAPVRVKMPDRNTYPDLPKDFTYAQVSAEGDHSLAVGSDGNAWAWGCNFYGPLGNN 901

Query: 316 GDDWM-----YPKPL------MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGEL 362
             +W       PK +       D S        SG  H+   +G+D +  +WG+   G+L
Sbjct: 902 TTNWQGDANPVPKRVRDSANPTDKSKGQQATQVSGGYHYSLALGSDGNAYAWGYNSSGQL 961

Query: 363 GYGPYGQKSSAMPKKVDI 380
           G G    KS  +P   ++
Sbjct: 962 GDGTTNDKSVPVPVAFNL 979



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 166/400 (41%), Gaps = 68/400 (17%)

Query: 58  IRF--VAAGCVSCH--CVAVDVEGRCYTWGRNERGQLGHGDKIQR---------DRPTIV 104
           IRF  ++ G  S +   +AV  +G  Y WG N  GQLG G   +R         DR T  
Sbjct: 555 IRFSQISGGINSNYGFSLAVGSDGNAYAWGYNYNGQLGDGTSTERHAPVMVWMPDRKTYP 614

Query: 105 SELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKHGQL--GSGSIRNEIEPSPVRCLVSE 162
              + +   +  AG  H++ +  DGN+ A+G+N  GQL  G+G+ RN    +PVR    +
Sbjct: 615 DLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVQGQLGDGTGTGRN----TPVRVKTPD 670

Query: 163 -VTATACGADFTVWLSSVEGASIL------NA---GLPQYGQLGHGTDNEYNTKDSSVKL 212
             T     ADFT    S  G   L      NA   G    GQLG GT N+Y  + + V++
Sbjct: 671 RKTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVNGQLGGGTSNDY--RRTPVRV 728

Query: 213 AYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVP 272
             E   R       A  T V+V+ G  H++A+ S G  + WG    G+LG     +   P
Sbjct: 729 --ETPDRKTYPDLPADFTYVQVSAGRYHSLALGSDGNAWAWGSNFEGQLGDGTGTNRNTP 786

Query: 273 RRVDVFQRNNV--LPPEAV---ISAGSVNSSCTAGGGQLYMWGKLKNN------------ 315
             V    R+    LP +     +SAG ++S      G  + WG+  N             
Sbjct: 787 VMVKTPDRSTYPDLPADFTYVQVSAGWLHSLALGSDGNAWAWGRNTNGQLGDGTSGTDRT 846

Query: 316 -------GDDWMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYG 368
                   D   YP    D +    +    G+    VG+D +  +WG   YG LG     
Sbjct: 847 APVRVKMPDRNTYPDLPKDFT--YAQVSAEGDHSLAVGSDGNAWAWGCNFYGPLGNNTTN 904

Query: 369 QKSSA--MPKKV-------DILEGMHVISVACGYGHSLVI 399
            +  A  +PK+V       D  +G     V+ GY +SL +
Sbjct: 905 WQGDANPVPKRVRDSANPTDKSKGQQATQVSGGYHYSLAL 944



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 99/373 (26%), Positives = 144/373 (38%), Gaps = 62/373 (16%)

Query: 76  EGRCYTWG-RNERG-QLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSH--TVVVTEDGNS 131
           + R  TWG   +RG QLG  +      P   S   ++     G   ++  ++ V  DGN+
Sbjct: 522 QSRNSTWGISPDRGSQLGR-EPTTITPPDSASRGIRFSQISGGINSNYGFSLAVGSDGNA 580

Query: 132 LAFGWNKHGQLGSGSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGASIL------ 185
            A+G+N +GQLG G+      P  V  +    T     ADFT    S  G   L      
Sbjct: 581 YAWGYNYNGQLGDGTSTERHAPVMV-WMPDRKTYPDLPADFTYVQVSAGGQHSLALGSDG 639

Query: 186 NA---GLPQYGQLGHGTDNEYNTK---DSSVKLAYEAQPRPRAIAALAGETIVKVACGTN 239
           NA   G    GQLG GT    NT     +  +  Y   P        A  T V+V+ G  
Sbjct: 640 NAYAWGYNVQGQLGDGTGTGRNTPVRVKTPDRKTYPDLP--------ADFTYVQVSAGGQ 691

Query: 240 HTVAVDSKGYVYTWGFGGYGRLGHREQKD-EWVPRRVDVFQRNNV--LPPEAV---ISAG 293
           H++A+ S G  Y WG+   G+LG     D    P RV+   R     LP +     +SAG
Sbjct: 692 HSLALGSDGNAYAWGYNVNGQLGGGTSNDYRRTPVRVETPDRKTYPDLPADFTYVQVSAG 751

Query: 294 SVNSSCTAGGGQLYMWGK------------------LKNNGDDWMYPKPLMDLSGWNLRC 335
             +S      G  + WG                   +    D   YP    D +      
Sbjct: 752 RYHSLALGSDGNAWAWGSNFEGQLGDGTGTNRNTPVMVKTPDRSTYPDLPADFT---YVQ 808

Query: 336 MDSGNMHHF-VGADSSCISWGHAQYGELGYGPYGQKSSA-----MPKK---VDILEGMHV 386
           + +G +H   +G+D +  +WG    G+LG G  G   +A     MP +    D+ +    
Sbjct: 809 VSAGWLHSLALGSDGNAWAWGRNTNGQLGDGTSGTDRTAPVRVKMPDRNTYPDLPKDFTY 868

Query: 387 ISVACGYGHSLVI 399
             V+    HSL +
Sbjct: 869 AQVSAEGDHSLAV 881


>gi|297598338|ref|NP_001045419.2| Os01g0952300 [Oryza sativa Japonica Group]
 gi|255674079|dbj|BAF07333.2| Os01g0952300 [Oryza sativa Japonica Group]
          Length = 1133

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 151/376 (40%), Gaps = 47/376 (12%)

Query: 47  PTRLRPLVGVDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSE 106
           P  L   V +D++ ++  C   H   V  +G  Y+WG    G+LGHG      +P ++  
Sbjct: 302 PKPLEFAVRLDVQNIS--CGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDS 359

Query: 107 LSKYKIKKAGAGRSHTVVVTEDGNSLAF--GWNKHGQLGSGSIRNEIEPSPVRCLVS--E 162
           L+   I+    G  HT  VT  G+   +  G  K G LG G+  +   P  V   +    
Sbjct: 360 LAHMNIELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPLEGIH 419

Query: 163 VTATACGADFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRA 222
           V++ +CG   T  ++S     +   G   +G LGHG     +               PR 
Sbjct: 420 VSSISCGPWHTALVTS--AGQLFTFGDGSFGVLGHGDRASLSV--------------PRE 463

Query: 223 IAALAGETIVKVACGTNHTVAV------------DSKGYVYTWGFGGYGRLGHREQKDEW 270
           + +L G   V+ ACG  HT AV             S G ++TWG G  GRLGH ++   +
Sbjct: 464 VESLKGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRF 523

Query: 271 VPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPL 325
           VP  V       V P    ++ G   +      G +Y     ++G+L N   D + P  +
Sbjct: 524 VPTCVAAL----VEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGLLPVRV 579

Query: 326 MDLSGWNLRCMDSGNMHH--FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEG 383
                 N     S   +H   + + +   +WG    G LG+G  G      P  V+ L+ 
Sbjct: 580 EGKLHKNFVEEISCGAYHVAVLTSRTEVYTWGKGANGRLGHG--GTDDKNTPTLVEALKD 637

Query: 384 MHVISVACGYGHSLVI 399
             V SV CG   +  I
Sbjct: 638 KQVRSVVCGINFTAAI 653



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 89/194 (45%), Gaps = 18/194 (9%)

Query: 218 PRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDV 277
           P+P   A      +  ++CG  H   V  +G +Y+WG    GRLGH    D   P+ +D 
Sbjct: 302 PKPLEFAVRL--DVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVAQPKLIDS 359

Query: 278 FQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGK------LKNNGDD---WMYPKPLMDL 328
               N+     +++ G  ++      G LY WG       L  +G+D   W+  +    L
Sbjct: 360 LAHMNI----ELVACGEYHTCAVTLSGDLYTWGDGTFKFGLLGHGNDVSHWVPKRVDGPL 415

Query: 329 SGWNLRCMDSGNMHH-FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVI 387
            G ++  +  G  H   V +     ++G   +G LG+G   + S ++P++V+ L+G+  +
Sbjct: 416 EGIHVSSISCGPWHTALVTSAGQLFTFGDGSFGVLGHG--DRASLSVPREVESLKGLRTV 473

Query: 388 SVACGYGHSLVIVD 401
             ACG  H+  +V+
Sbjct: 474 RAACGVWHTAAVVE 487



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 40/242 (16%)

Query: 19  GGELLFCGSTCWDAVGRRKGALDGNLVSPTRLRPLVGVDIRFVAAGCVSCHCVAV----- 73
            G+L   G   +  +G    A   +L  P  +  L G  +R V A C   H  AV     
Sbjct: 436 AGQLFTFGDGSFGVLGHGDRA---SLSVPREVESLKG--LRTVRAACGVWHTAAVVEVMV 490

Query: 74  -------DVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVT 126
                     G+ +TWG  ++G+LGHGDK  R  PT V+ L +    +   G   TV +T
Sbjct: 491 GNSSSSNCSSGKIFTWGDGDKGRLGHGDKDSRFVPTCVAALVEPNFCQVACGHCLTVALT 550

Query: 127 EDGNSLAFGWNKHGQLGS----GSIRNEIEPSPVRCLVSEVTATACGADFTVWLSSVEGA 182
             G+    G   +GQLG+    G +   +E    +  V E++   CGA     L+S    
Sbjct: 551 TSGHVYTMGSAVYGQLGNPQADGLLPVRVEGKLHKNFVEEIS---CGAYHVAVLTS--RT 605

Query: 183 SILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTV 242
            +   G    G+LGHG  ++ NT              P  + AL  + +  V CG N T 
Sbjct: 606 EVYTWGKGANGRLGHGGTDDKNT--------------PTLVEALKDKQVRSVVCGINFTA 651

Query: 243 AV 244
           A+
Sbjct: 652 AI 653


>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
 gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
          Length = 1024

 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/366 (26%), Positives = 155/366 (42%), Gaps = 49/366 (13%)

Query: 56  VDIRFVAAGCVSCHCVAVDVEGRCYTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKA 115
           +D++ +A G    H   +  +G  Y+WG    G +G+   I+  RP +V  ++   +K  
Sbjct: 261 LDVQSIACG--ETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHVKAV 318

Query: 116 GAGRSHTVVVTEDGNSLAFGWNKH-GQLGSGSIRNEIEP----SPVRCLVSEVTATACGA 170
             G  H   VT  G    +G   H GQL   +  N   P    SP+  +   V   ACG 
Sbjct: 319 AYGSKHACAVTVSGELFEWGEGPHMGQLDCYA-NNLWFPHKLFSPLDGI--SVVKIACGP 375

Query: 171 DFTVWLSSVEGASILNAGLPQYGQLGHGTDNEYNTKDSSVKLAYEAQPRPRAIAALAGET 230
             T  ++S     +   G   +G LGHG D +  T             RP+ +  L G  
Sbjct: 376 WHTAIITS--SGQLYTYGDGTFGVLGHG-DTQGTT-------------RPKEVEYLKGSR 419

Query: 231 IVKVACGTNHTVAV----------DSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQR 280
           +  VACG  HT A+            +  ++TWG    G+LGH ++K + +P  VD    
Sbjct: 420 VKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSLTD 479

Query: 281 NNVLPPEAVISAGSVNSSCTAGGGQLY-----MWGKLKNNGDDWMYPKPLMDLSGWNL-R 334
            + +     +S G   +   +  G ++     M G+L N   D      +  L      R
Sbjct: 480 YDFIQ----VSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVR 535

Query: 335 CMDSGNMH-HFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGY 393
            + SG+ H   +  +    +WG  + G+LG G Y  +S+  P  VD LEG  V S++CGY
Sbjct: 536 HISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRST--PTLVDALEGRQVESISCGY 593

Query: 394 GHSLVI 399
            ++  +
Sbjct: 594 NYTAAV 599



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 72/321 (22%), Positives = 120/321 (37%), Gaps = 58/321 (18%)

Query: 80  YTWGRNERGQLGHGDKIQRDRPTIVSELSKYKIKKAGAGRSHTVVVTEDGNSLAFGWNKH 139
           + WG +  G +   D   +  P +V   +   ++    G +H  ++T+ G   ++G    
Sbjct: 232 FFWG-DAFGSILDYDDTSKSLPMLVDSTNMLDVQSIACGETHAAIITKQGEVYSWGNESS 290

Query: 140 GQLGSGSIRNEIEPSPVRCLVS-EVTATACGADFTVWLSSVEGASILNAGLPQYGQLGHG 198
           G +G+        P  V  + S  V A A G+     ++ V G        P  GQL   
Sbjct: 291 GGIGNQVNIKVSRPKLVESVASLHVKAVAYGSKHACAVT-VSGELFEWGEGPHMGQLDCY 349

Query: 199 TDNEYNTKDSSVKLAYEAQPRPRAIAALAGETIVKVACGTNHTVAVDSKGYVYTWGFGGY 258
            +N +                 +  + L G ++VK+ACG  HT  + S G +YT+G G +
Sbjct: 350 ANNLWFPH--------------KLFSPLDGISVVKIACGPWHTAIITSSGQLYTYGDGTF 395

Query: 259 GRLGHREQKDEWVPRRVDVFQRNNVLPPEAVISAGSVNSSCTAGGGQLYMWGKLKNNGDD 318
           G LGH + +    P+ V+  + + V               C A G               
Sbjct: 396 GVLGHGDTQGTTRPKEVEYLKGSRV--------------KCVACG--------------P 427

Query: 319 WMYPKPLMDLSGWNLRCMDSGNMHHFVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKV 378
           W     +  LS +                 S   +WG A  G+LG+    +K   +P  V
Sbjct: 428 WHTAAIVEVLSDFKSN-----------SPRSKLFTWGDADRGKLGHA--DKKMKLIPTCV 474

Query: 379 DILEGMHVISVACGYGHSLVI 399
           D L     I V+CG   ++V+
Sbjct: 475 DSLTDYDFIQVSCGMALTVVL 495



 Score = 58.2 bits (139), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)

Query: 231 IVKVACGTNHTVAVDSKGYVYTWGFGGYGRLGHREQKDEWVPRRVDVFQRNNVLPPEAVI 290
           +  +ACG  H   +  +G VY+WG    G +G++       P+ V+     +V      +
Sbjct: 263 VQSIACGETHAAIITKQGEVYSWGNESSGGIGNQVNIKVSRPKLVESVASLHV----KAV 318

Query: 291 SAGSVNSSCTAGGGQLYMWG------KLKNNGDDWMYPKPLMD-LSGWNLRCMDSGNMHH 343
           + GS ++      G+L+ WG      +L    ++  +P  L   L G ++  +  G  H 
Sbjct: 319 AYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSPLDGISVVKIACGPWHT 378

Query: 344 -FVGADSSCISWGHAQYGELGYGPYGQKSSAMPKKVDILEGMHVISVACGYGHSLVIVD 401
             + +     ++G   +G LG+G    + +  PK+V+ L+G  V  VACG  H+  IV+
Sbjct: 379 AIITSSGQLYTYGDGTFGVLGHG--DTQGTTRPKEVEYLKGSRVKCVACGPWHTAAIVE 435


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.135    0.426 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,209,304,507
Number of Sequences: 23463169
Number of extensions: 326282351
Number of successful extensions: 790560
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3829
Number of HSP's successfully gapped in prelim test: 1551
Number of HSP's that attempted gapping in prelim test: 697857
Number of HSP's gapped (non-prelim): 34374
length of query: 414
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 269
effective length of database: 8,957,035,862
effective search space: 2409442646878
effective search space used: 2409442646878
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)