BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015020
(414 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|B Chain B, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|C Chain C, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
pdb|1BXS|D Chain D, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound
Length = 501
Score = 418 bits (1074), Expect = e-117, Method: Compositional matrix adjust.
Identities = 206/396 (52%), Positives = 268/396 (67%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+ K+TK+FIN E+ SVSGK F +P T E + + EGDKEDVD AVKAARQAF G P
Sbjct: 17 QFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GKL S A + D+ G TLRY AG
Sbjct: 77 WRTMDASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + M YT EP+GV G IIPWNFP MF K+ PAL+ G T++VKPAE
Sbjct: 137 ADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK VSLELGGKSP ++F D D++ A + A G+ +++G+ C+A+SR++V+E IY
Sbjct: 257 AAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +V+G+P P V QGPQ+DK+Q+++IL IE GK+EGA L
Sbjct: 317 DEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F++VT+DM IAK EIFGPV +MKFK
Sbjct: 377 NKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFK 412
>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|B Chain B, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|C Chain C, Retinal Dehydrogenase Type Two With Nad Bound
pdb|1BI9|D Chain D, Retinal Dehydrogenase Type Two With Nad Bound
Length = 499
Score = 401 bits (1030), Expect = e-112, Method: Compositional matrix adjust.
Identities = 201/396 (50%), Positives = 260/396 (65%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP- 76
EIK+TK+FIN E+ +S SG+ F +P TGE + + E DK D+D AV+AAR AF G
Sbjct: 15 EIKYTKIFINNEWQNSESGRVFPVCNPATGEQVCEVQEADKVDIDKAVQAARLAFSLGSV 74
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W R +ER ++ K AD GK A D+ G TLRYYAG
Sbjct: 75 WRRMDASERGRLLDKLADLVERDRATLATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGW 134
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKIHG + + +T EPIGV G IIPWNFP MF K++PAL G T+++KPAE
Sbjct: 135 ADKIHGMTIPVDGDYFTFTRHEPIGVCGQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAE 194
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL ALY L K AG P GV+N++PG+GPTAGAAIASH+ IDK++FTGST+VG+ + +
Sbjct: 195 QTPLSALYMGALIKEAGFPPGVVNILPGYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQE 254
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AA SNLK V+LELGGKSP +IF D D++ A + A G+ FN+G+ C A SR++V+E IY
Sbjct: 255 AAGRSNLKRVTLELGGKSPNIIFADADLDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIY 314
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
+EF K+ VE+AK +VG PFDP QGPQ+DKKQ+++IL I+ G EGA L
Sbjct: 315 EEFVKRSVERAKRRIVGSPFDPTTEQGPQIDKKQYNKILELIQSGVAEGAKLECGGKGLG 374
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
EPT+F+NVT+DM IAK EIFGPV +++FK
Sbjct: 375 RKGFFIEPTVFSNVTDDMRIAKEEIFGPVQEILRFK 410
>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONN|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|2ONO|A Chain A, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|B Chain B, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|C Chain C, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|D Chain D, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|E Chain E, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|F Chain F, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|G Chain G, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONO|H Chain H, Arg475gln Mutant Of Mitochondrial Aldehyde Dehydrogenase,
Apo Form, Pseudo-Merohedrally Twinned
pdb|2ONP|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|B Chain B, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|C Chain C, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|D Chain D, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|E Chain E, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|F Chain F, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|G Chain G, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
pdb|2ONP|H Chain H, Arg475gln Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Complexed With Nad+
Length = 500
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 261/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|B Chain B, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|C Chain C, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|D Chain D, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|E Chain E, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|F Chain F, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|G Chain G, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1O05|H Chain H, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase
pdb|1NZX|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZX|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ In The Presence Of Low Mg2+
pdb|1NZZ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1NZZ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Low Mg2+
pdb|1O00|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O00|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mg2+ Showing Dual Nad(H) Conformations
pdb|1O01|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O01|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Crotonaldehyde, Nad(H) And Mg2+
pdb|1O02|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|1O02|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nadh In The Presence Of Mg2+
pdb|3INJ|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3INJ|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Agonist Alda-1
pdb|3SZ9|A Chain A, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|B Chain B, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|C Chain C, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|D Chain D, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|E Chain E, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|F Chain F, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|G Chain G, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|3SZ9|H Chain H, Crystal Structure Of Human Aldh2 Modified With The
Beta-Elimination Product Of Aldi-3;
1-(4-Ethylbenzene)prop-2-En-1-One
pdb|4FQF|A Chain A, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|B Chain B, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|C Chain C, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
pdb|4FQF|D Chain D, Crystal Structure Of A Thionitrate Intermediate Of Human
Aldehyde Dehydrogenase-2
Length = 500
Score = 400 bits (1027), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 261/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|1CW3|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Complexed With
Nad+ And Mn2+
pdb|2VLE|A Chain A, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|B Chain B, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|C Chain C, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|D Chain D, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|E Chain E, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|F Chain F, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|G Chain G, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
pdb|2VLE|H Chain H, The Structure Of Daidzin, A Naturally Occurring Anti
Alcohol-Addiction Agent, In Complex With Human
Mitochondrial Aldehyde Dehydrogenase
Length = 494
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 261/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 7 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 66
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 67 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 126
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 127 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 186
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 187 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 246
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 247 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 306
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 307 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 366
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 367 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 405
>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|1ZUM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Apo Form
pdb|2ONM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|I Chain I, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|J Chain J, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|K Chain K, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
pdb|2ONM|L Chain L, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Nad+
Length = 500
Score = 399 bits (1026), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/399 (50%), Positives = 261/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N81|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Apo Form
pdb|3N82|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N82|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nadh Complex
pdb|3N83|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|B Chain B, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|C Chain C, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|D Chain D, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|E Chain E, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|F Chain F, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|G Chain G, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
pdb|3N83|H Chain H, T244a Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase, Nad Complex
Length = 500
Score = 397 bits (1021), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 260/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+F GST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFAGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|B Chain B, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|C Chain C, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|D Chain D, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|E Chain E, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|F Chain F, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|G Chain G, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
pdb|4FR8|H Chain H, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In
Complex With Nitroglycerin
Length = 500
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 261/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+L+LGGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLQLGGKSPNIIMSDADMDWAVEQAHFALFFNQGQSCSAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1NZW|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nadh And Mg2+
pdb|1O04|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|B Chain B, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|C Chain C, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|D Chain D, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|E Chain E, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|F Chain F, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|G Chain G, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
pdb|1O04|H Chain H, Cys302ser Mutant Of Human Mitochondrial Aldehyde
Dehydrogenase Complexed With Nad+ And Mg2+
Length = 500
Score = 395 bits (1016), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 260/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
pdb|3INL|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant,
Aldh22, Complexed With Agonist Alda-1
Length = 500
Score = 395 bits (1015), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 260/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|B Chain B, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|C Chain C, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|D Chain D, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|E Chain E, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|F Chain F, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|G Chain G, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
pdb|3N80|H Chain H, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form
Length = 500
Score = 395 bits (1014), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/399 (50%), Positives = 260/399 (65%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ ++FIN E+ D+VS KTF T++P TGE I ++AEGDKEDVD AVKAAR AF
Sbjct: 13 QQPEVFCNQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQL 72
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R + R ++ + AD GK + + + D+ LRYY
Sbjct: 73 GSPWRRMDASHRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYY 132
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 133 AGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 192
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+N+VPGFGPTAGAAIASH D+DKV+FTGST++GR
Sbjct: 193 VAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRV 252
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA +SNLK V+LELGGKSP +I D D++ A + A + FN+G+ A SR +VQE
Sbjct: 253 IQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCXCAGSRTFVQE 312
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IYDEF ++ V +AK+ VVG+PFD QGPQVD+ QF +IL YI GK+EGA LL
Sbjct: 313 DIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGG 372
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F +V + M IAK EIFGPVM ++KFK
Sbjct: 373 IAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFK 411
>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|B Chain B, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|C Chain C, The X-Ray Crystal Structure Of Eta-Crystallin
pdb|1O9J|D Chain D, The X-Ray Crystal Structure Of Eta-Crystallin
Length = 501
Score = 393 bits (1010), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/396 (49%), Positives = 260/396 (65%), Gaps = 1/396 (0%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-P 76
+I+ TKLFIN E+ +SVSGKTF +P T E I + E DKEDVD AVKAAR+AF G P
Sbjct: 17 KIQHTKLFINNEWHESVSGKTFPVFNPATEEKICEVEEADKEDVDKAVKAAREAFQMGSP 76
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGA 136
W +ER ++ K AD GK+ + A + D+ LRY AG
Sbjct: 77 WRTMDASERGQLIYKLADLIERDRLLLATLESINAGKVFASAYLMDLDYCIKALRYCAGW 136
Query: 137 ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
ADKI G + + YT EPIGV G I PWN P + K+ PAL G T+IVKPAE
Sbjct: 137 ADKIQGRTIPVDGEFFSYTRHEPIGVCGLIFPWNAPMILLACKIGPALCCGNTVIVKPAE 196
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
QTPL AL+ A L K AG P GV+N+VPG+GPTAGAAI+SHMD+DKV+FTGST+VG+ + +
Sbjct: 197 QTPLTALHVASLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQE 256
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
AAA SNLK V+LELG K+P ++F D D+++A + A G+ N+G+ C+A+S+++V+E IY
Sbjct: 257 AAAKSNLKRVTLELGAKNPCIVFADADLDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIY 316
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
DEF ++ VE+AK +V G+P P V GPQ++K Q ++I+ IE GK+EGA L
Sbjct: 317 DEFVQRSVERAKKYVFGNPLTPGVNHGPQINKAQHNKIMELIESGKKEGAKLECGGGPWG 376
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F+NVT+DM IAK EIFGPV +MKFK
Sbjct: 377 NKGYFIQPTVFSNVTDDMRIAKEEIFGPVQQIMKFK 412
>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1AG8|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria
pdb|1A4Z|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|B Chain B, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|C Chain C, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
pdb|1A4Z|D Chain D, Aldehyde Dehydrogenase From Bovine Mitochondria Complex
With Nad (Reduced) And Samarium (Iii)
Length = 499
Score = 389 bits (998), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/399 (49%), Positives = 257/399 (64%), Gaps = 1/399 (0%)
Query: 15 KMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDH 74
+ PE+ + ++FIN E+ D+VS KTF T++P TG+ I +AEGDK DVD AVKAAR AF
Sbjct: 12 QQPEVLYNQIFINNEWHDAVSKKTFPTVNPSTGDVICHVAEGDKADVDRAVKAARAAFQL 71
Query: 75 G-PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
G PW R +ER ++ + AD GK + + + D+ LRYY
Sbjct: 72 GSPWRRMDASERGRLLNRLADLIERDRTYLAALETLDNGKPYIISYLVDLDMVLKCLRYY 131
Query: 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AG ADK HG+ + + YT EP+GV G IIPWNFP M K+ PALA G +++K
Sbjct: 132 AGWADKYHGKTIPIDGDYFSYTRHEPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMK 191
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
AEQTPL ALY A+L K AG P GV+NV+PGFGPTAGAAIASH D+DKV+FTGST+VG
Sbjct: 192 VAEQTPLTALYVANLIKEAGFPPGVVNVIPGFGPTAGAAIASHEDVDKVAFTGSTEVGHL 251
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ AA SNLK V+LE+GGKSP +I D D++ A + A + FN+G+ C A SR +VQE
Sbjct: 252 IQVAAGKSNLKRVTLEIGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQE 311
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
IY EF ++ V +AK+ VVG+PFD QGPQVD+ QF ++L YI+ GK EG LL
Sbjct: 312 DIYAEFVERSVARAKSRVVGNPFDSRTEQGPQVDETQFKKVLGYIKSGKEEGLKLLCGGG 371
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PT+F ++ + M IAK EIFGPVM ++KFK
Sbjct: 372 AAADRGYFIQPTVFGDLQDGMTIAKEEIFGPVMQILKFK 410
>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2P|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase
pdb|2O2Q|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|B Chain B, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|C Chain C, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2Q|D Chain D, Crystal Structure Of The C-Terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadp
pdb|2O2R|A Chain A, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|B Chain B, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|C Chain C, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|2O2R|D Chain D, Crystal Structure Of The C-terminal Domain Of Rat
10'formyltetrahydrofolate Dehydrogenase In Complex With
Nadph
pdb|4GO2|A Chain A, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|B Chain B, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|C Chain C, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
pdb|4GO2|D Chain D, Crystal Structure Of The C-terminal Domain Of
10'formyltetrahydrofolate Dehydrogenase In Complex With
Thio-nadp
Length = 517
Score = 322 bits (825), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/405 (39%), Positives = 242/405 (59%), Gaps = 8/405 (1%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
TL+ +PT+FT+V + M IAK E FGP+M + +F
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430
>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHM|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHO|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|B Chain B, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|C Chain C, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHO|D Chain D, Crystal Structure Of The E673q Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 321 bits (822), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 157/405 (38%), Positives = 242/405 (59%), Gaps = 8/405 (1%)
Query: 11 KSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQ 70
K +MP +LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++
Sbjct: 30 KLTLQMP----YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKE 85
Query: 71 AFDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTL 130
AF++G W + + +R ++ + AD G +++ A + + T
Sbjct: 86 AFENGLWGKINARDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTF 145
Query: 131 RYYAGAADKIHGEVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAA 186
RY+AG DKI G + +++A L +EP+GV G +IPWN+P M K + LAA
Sbjct: 146 RYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAA 205
Query: 187 GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
G T+++KPA+ TPL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTG
Sbjct: 206 GNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST+VG+ +M++ A SN+K VSL+LGGKSPL+IF D D+N A M + + FNKGE C+A+
Sbjct: 266 STEVGKHIMKSCALSNVKKVSLQLGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAA 325
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
R++V+E I+++F +K+VE+ + +G+P + GPQ + +++ Y + G +EGA
Sbjct: 326 GRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGA 385
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
TL+ +PT+FT+V + M IAK E FGP+M + +F
Sbjct: 386 TLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430
>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|B Chain B, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|C Chain C, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
pdb|3RHJ|D Chain D, Crystal Structure Of The E673a Mutant Of The C-Terminal
Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In
Complex With Co-Purified Nadp
Length = 517
Score = 320 bits (819), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 237/393 (60%), Gaps = 4/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++AF++G W + +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R ++ + AD G +++ A + + T RY+AG DKI G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 143 EVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
+ +++A L +EP+GV G +IPWN+P M K + LAAG T+++KPA+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A SN+K VSL LGGKSPL+IF D D+N A M + + FNKGE C+A+ R++V+E I+++
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ 337
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 379 XXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+FT+V + M IAK E FGP+M + +F
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430
>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GNZ|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|4GO0|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|B Chain B, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|C Chain C, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
pdb|4GO0|D Chain D, Crystal Structure Of The C707s Mutant Of C-terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadph
Length = 517
Score = 318 bits (814), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 237/393 (60%), Gaps = 4/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++AF++G W + +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R ++ + AD G +++ A + + T RY+AG DKI G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 143 EVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
+ +++A L +EP+GV G +IPWN+P M K + LAAG T+++KPA+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE +A+ R++V+E I+++
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQ 337
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 379 XXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+FT+V + M IAK E FGP+M + +F
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430
>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHR|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase In
Complex With Nadph
pdb|3RHP|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|B Chain B, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|C Chain C, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHP|D Chain D, Crystal Structure Of The C707a Mutant Of The C-Terminal
Domain Of 10'formyltetrahydrofolate Dehydrogenase
pdb|3RHQ|A Chain A, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|B Chain B, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|C Chain C, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
pdb|3RHQ|D Chain D, Crystal Structure Of The C707a Mutant Of C-Terminal Domain
Of 10'formyltetrahydrofolate Dehydrogenase In Complex
With Nadp
Length = 517
Score = 318 bits (814), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 154/393 (39%), Positives = 237/393 (60%), Gaps = 4/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++AF++G W + +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R ++ + AD G +++ A + + T RY+AG DKI G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 143 EVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
+ +++A L +EP+GV G +IPWN+P M K + LAAG T+++KPA+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A SN+K VSLELGGKSPL+IF D D+N A M + + FNKGE +A+ R++V+E I+++
Sbjct: 278 ALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 379 XXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+FT+V + M IAK E FGP+M + +F
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430
>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|B Chain B, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|C Chain C, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
pdb|3RHL|D Chain D, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE
C-Terminal Domain Of Rat 10'formyltetrahydrofolate
Dehydrogenase In Complex With Co-Purified Nadp
Length = 517
Score = 315 bits (808), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 153/393 (38%), Positives = 236/393 (60%), Gaps = 4/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+LFI GEFVD+ KT+ TI+P G I +++ DVD AV AA++AF++G W + +
Sbjct: 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINA 97
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R ++ + AD G +++ A + + T RY+AG DKI G
Sbjct: 98 RDRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQG 157
Query: 143 EVLKMSRALQGYTL----REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
+ +++A L +EP+GV G +IPWN+P M K + LAAG T+++KPA+ T
Sbjct: 158 ATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVT 217
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL AL FA L AG+P GV+N++PG G G ++ H D+ K+ FTGST+VG+ +M++
Sbjct: 218 PLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A SN+K VSL LGGKSPL+IF D D+N A M + + FNKGE +A+ R++V+E I+++
Sbjct: 278 ALSNVKKVSLALGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQ 337
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
F +K+VE+ + +G+P + GPQ + +++ Y + G +EGATL+
Sbjct: 338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRP 397
Query: 379 XXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+FT+V + M IAK E FGP+M + +F
Sbjct: 398 GFFFQPTVFTDVEDHMYIAKEESFGPIMIISRF 430
>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|C Chain C, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
pdb|4A0M|D Chain D, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Spinach In Complex With Nad
Length = 496
Score = 285 bits (728), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 156/396 (39%), Positives = 223/396 (56%), Gaps = 10/396 (2%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+LFI+GE+ + + I+P T E I I EDV++AV AAR+AF W SG
Sbjct: 9 QLFIDGEWREPIKKNRIPVINPSTEEIIGDIPAATAEDVEVAVVAARRAFRRNNWSATSG 68
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
A R + A GK A + DI A+ Y+AG A+ + G
Sbjct: 69 AHRATYLRAIAAKITEKKDHFVKLETIDSGKPFDEAVL-DIDDVASCFEYFAGQAEALDG 127
Query: 143 E-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
+ L M R + + LR+P+GVVG I PWN+P M K++PALAAGCT ++KP+E
Sbjct: 128 KQKAPVTLPMER-FKSHVLRQPLGVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSEL 186
Query: 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
+ L F + G+P GVLN++ G GP AGA + SH D+DK++FTGS+ G +VM A
Sbjct: 187 ASVTCLEFGEVCNEVGLPPGVLNILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM-A 245
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
+A +KPV+LELGGKSP+++F+DVD++ + + G + G+IC A+SR+ V E I
Sbjct: 246 SAAQLVKPVTLELGGKSPIVVFEDVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAA 305
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XXXXX 375
EF KLV+ K + DPF+ R GP + K Q+D+I+ +I K EGAT+L
Sbjct: 306 EFVDKLVKWTKNIKISDPFEEGCRLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEH 365
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPTI T+++ M I K E+FGPV+ + F
Sbjct: 366 LKKGYYIEPTIVTDISTSMQIWKEEVFGPVLCVKTF 401
>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|F Chain F, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|G Chain G, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|H Chain H, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 283 bits (723), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 222/400 (55%), Gaps = 6/400 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M + KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A +
Sbjct: 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W + +R I+ + D GK + + DI A+ L YYAG
Sbjct: 59 VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
I GE + + YT REP+GVV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+A++S+LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++C +RV++
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
FE K++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 376 XXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+FT+ +DM I + EIFGPVM+++ +
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398
>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|B Chain B, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|C Chain C, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct.
pdb|2WOX|D Chain D, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa
With Nad(P)h-Catalytic Thiol Adduct
Length = 489
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/393 (38%), Positives = 220/393 (55%), Gaps = 6/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A + W +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R I+ + D GK + + DI A+ L YYAG I G
Sbjct: 65 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
E + + YT REP+GVV I WN+P + K +PALAAG MI KP+E TPL A
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM +A++S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++C +RV++ FE K
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXX--- 379
++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 380 -XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+FT+ +DM I + EIFGPVM+++ +
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 397
>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
pdb|2XDR|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa
Length = 489
Score = 280 bits (715), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 151/393 (38%), Positives = 219/393 (55%), Gaps = 6/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A + W +
Sbjct: 7 KLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QKVWAAMTA 64
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
+R I+ + D GK + + DI A+ L YYAG I G
Sbjct: 65 MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
E + + YT REP+GVV I WN+P + K +PALAAG MI KP+E TPL A
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
L A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM +A++S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
LK V++ LGGKSPL+IF D D++ AAD+A++ F+ G++C +RV++ FE K
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXX--- 379
++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 380 -XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+FT+ +DM I + EIFGPVM+++ +
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 397
>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|B Chain B, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
pdb|3ZQA|D Chain D, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa
In Complex With Nadph
Length = 490
Score = 278 bits (712), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 221/400 (55%), Gaps = 6/400 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M + KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A +
Sbjct: 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W + +R I+ + D GK + + DI A+ L YYAG
Sbjct: 59 VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
I GE + + YT REP+GVV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+A++S+LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++ +RV++
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
FE K++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 376 XXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+FT+ +DM I + EIFGPVM+++ +
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398
>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
pdb|2WME|E Chain E, Crystallographic Structure Of Betaine Aldehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 152/400 (38%), Positives = 221/400 (55%), Gaps = 6/400 (1%)
Query: 16 MPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG 75
M + KL+I G +V++ SG TFETI+P GE +A++ +EDV+ AV++A +
Sbjct: 1 MARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEG--QK 58
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W + +R I+ + D GK + + DI A+ L YYAG
Sbjct: 59 VWAAMTAMQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAG 118
Query: 136 AADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195
I GE + + YT REP+GVV I WN+P + K +PALAAG MI KP+
Sbjct: 119 LVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPS 178
Query: 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255
E TPL AL A + AGVPDGV NV+ G G G + H I+K+SFTG T G++VM
Sbjct: 179 EVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVM 238
Query: 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
+A++S+LK V++ELGGKSPL+IF D D++ AAD+A++ F+ G++ +RV++
Sbjct: 239 ASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQ 298
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
FE K++E+ + +GDP D GP V + +L YIE GK + A LL
Sbjct: 299 QARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERV 358
Query: 376 XXXX----XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+FT+ +DM I + EIFGPVM+++ +
Sbjct: 359 TDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398
>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
pdb|3IWJ|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From
Pisum Sativum (Psamadh2)
Length = 503
Score = 261 bits (668), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 222/403 (55%), Gaps = 13/403 (3%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGP-- 76
I +LFING++ V K I+P T I I KEDVD+AV AA+ A
Sbjct: 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGA 64
Query: 77 -WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG 135
W SGA R + A GK A DI A YYA
Sbjct: 65 DWATASGAVRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYAD 123
Query: 136 AADKIHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTM 190
A+K+ L M + + LREPIGVVG I PWN+P M KV+PALAAGC
Sbjct: 124 LAEKLDARQKAPVSLPMD-TFKSHVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAA 182
Query: 191 IVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDV 250
I+KP+E L L + K G+P GVLN++ G GP AGA +A+H D+DKV+FTGS+
Sbjct: 183 ILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSAT 242
Query: 251 GRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310
G ++M AAA +KPVSLELGGKSPL++F+DVD++ AA+ A+ G + G+IC A+SR+
Sbjct: 243 GSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLI 301
Query: 311 VQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370
+ E I EF ++V+ K + DP + R GP V + Q+++IL ++ + K EGAT+LT
Sbjct: 302 LHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILT 361
Query: 371 XXXXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPTI T+VT +M I + E+FGPV+ + F
Sbjct: 362 GGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKTF 404
>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
pdb|4I9B|B Chain B, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum
Lycopersium (slamadh1) With A Thiohemiacetal
Intermediate
Length = 517
Score = 258 bits (660), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 156/399 (39%), Positives = 219/399 (54%), Gaps = 13/399 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+L+I GE+ + V I+P T E I I EDVD+AV+AAR+A W +G
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYAGAADKI 140
A+R + A GK S A M D+ G YYAG A+ +
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGC---FEYYAGLAEAL 141
Query: 141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ S + + Y LREP+GVVG I PWN+P M KV+PALAAGC I+KP+E
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+ L + + G+P G LN++ G GP AG +ASH +DK+SFTGS G ++M
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVD-VNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AAA +KPVSLELGGKSP+++FDD+D ++ AA+ L GI N G++C A+SR+ VQE I
Sbjct: 262 AAAQL-VKPVSLELGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XXX 373
F +L++ K + DP + + GP V Q++++L +I + K EGAT+L
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERP 380
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PTI T+V M I K E+FGPV+ + FK
Sbjct: 381 QHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFK 419
>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3ED6|B Chain B, 1.7 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
pdb|3FG0|A Chain A, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|B Chain B, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|C Chain C, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|D Chain D, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|E Chain E, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|F Chain F, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|G Chain G, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
pdb|3FG0|H Chain H, 1.85 Angstrom Resolution Crystal Structure Of Betaine
Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus
(Idp00699) In Complex With Nad+
Length = 520
Score = 258 bits (658), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 145/398 (36%), Positives = 222/398 (55%), Gaps = 13/398 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ +I+GE+V+S + T + I+P E I ++EG KED + A+ AAR+AF+ G W + +
Sbjct: 34 RQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESGEWSQET- 92
Query: 83 AERRGIMLK-FADXXXXXXXXXXXXXXXXXGKL--HSWAKMGDIPGAANTLRYYAGAADK 139
AE RG ++ AD GK S+A M DI N Y+AG ADK
Sbjct: 93 AETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYADMDDI---HNVFMYFAGLADK 149
Query: 140 IHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
GE++ + ++EP+GVV I PWN+P K++PALA GC++++KP+E T
Sbjct: 150 DGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEIT 209
Query: 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258
PL + L + G P G +N++ G G G ++ H ++D VSFTG + G+ +M+ A
Sbjct: 210 PLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA 269
Query: 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDE 318
A +N+ ++LELGGK+P +IFDD D A D AL G F+ G++C A SR+ VQ I D+
Sbjct: 270 A-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDK 328
Query: 319 FEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXX 378
FE+ L+++ K +G+ FD GP + + ++I SY++ K EGAT+
Sbjct: 329 FEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRD 388
Query: 379 XXXX----EPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
EPT+ TN M I + E+FGPV+ + F+
Sbjct: 389 DLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFE 426
>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a
Mutant From Solanum Lycopersicum (slamadh1-e260a)
Length = 514
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/399 (38%), Positives = 218/399 (54%), Gaps = 13/399 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+L+I GE+ + V I+P T E I I EDVD+AV+AAR+A W +G
Sbjct: 25 QLYIGGEWREPVKKNRIPIINPATEEIIGDIPAATAEDVDIAVEAARKAIARDDWGSTTG 84
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYAGAADKI 140
A+R + A GK S A M D+ G YYAG A+ +
Sbjct: 85 AQRAKYLRAIAAKVLEKKSVLATLESLDSGKTLYESAADMDDVAGC---FEYYAGLAEAL 141
Query: 141 HGEVLK----MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ S + + Y LREP+GVVG I PWN+P M KV+PALAAGC I+KP+E
Sbjct: 142 DSRRMTPVNLNSDSYKSYVLREPLGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSE 201
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+ L + + G+P G LN++ G GP AG +ASH +DK+SFTGS G ++M
Sbjct: 202 LASITCLELGEICREIGLPSGALNILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT 261
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVD-VNTAADMALLGILFNKGEICVASSRVYVQEGI 315
AAA +KPVSL LGGKSP+++FDD+D ++ AA+ L GI N G++C A+SR+ VQE I
Sbjct: 262 AAAQL-VKPVSLALGGKSPIVVFDDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENI 320
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XXX 373
F +L++ K + DP + + GP V Q++++L +I + K EGAT+L
Sbjct: 321 ASAFMDRLLKWTKNIKISDPLEEDCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERP 380
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PTI T+V M I K E+FGPV+ + FK
Sbjct: 381 QHLKKGYYVQPTIITDVNTSMEIWKEEVFGPVLCVKTFK 419
>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|C Chain C, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|D Chain D, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|E Chain E, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|F Chain F, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|G Chain G, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|H Chain H, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|I Chain I, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|J Chain J, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|K Chain K, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
pdb|3IWK|L Chain L, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From
Pisum Sativum (Psamadh1)
Length = 503
Score = 253 bits (646), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 159/399 (39%), Positives = 219/399 (54%), Gaps = 13/399 (3%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPR 79
+LFI+GE+ + K I+P T I I KEDVDLAV AA++A W
Sbjct: 9 QLFIDGEWRVPILNKRIPNINPSTENIIGDIPAATKEDVDLAVDAAKRAISRKNGRDWSA 68
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
SG+ R + A GK A + D+ YYAG A++
Sbjct: 69 ASGSLRARYLRAIAAKIKEKKDELGKLESIDCGKPLEEA-LADLDDVVACFEYYAGLAEE 127
Query: 140 IHGE-----VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP 194
+ + L M + Y L+EPIGVV I PWN+P M K++PALAAGC I+KP
Sbjct: 128 LDSKQKAPISLPMD-TFKSYILKEPIGVVALITPWNYPFLMATWKIAPALAAGCAAILKP 186
Query: 195 AEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254
+E + L + K G+P GVLN+V G G AGA++ASH D+DK+SFTGS+ G ++
Sbjct: 187 SELASVTCLELGEICKEVGLPRGVLNIVTGLGHEAGASLASHPDVDKISFTGSSATGSKI 246
Query: 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG 314
M AA +KPVSLELGGKSP+++F+DVD++ A+ + G F G+IC A+SR+ V E
Sbjct: 247 MTTAAQL-VKPVSLELGGKSPIVVFEDVDLDKVAEWTVFGCFFTNGQICSATSRLIVHES 305
Query: 315 IYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT--XX 372
I EF KLV+ A+ + DP + R GP V + Q+ ++L+ I K EGAT+LT
Sbjct: 306 IAVEFVDKLVKWAENIKISDPLEEGCRLGPIVSEAQYKKVLNCISSAKSEGATILTGGRR 365
Query: 373 XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPTI T+VT M I + E+FGPV+A+ F
Sbjct: 366 PEHLKKGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTF 404
>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|B Chain B, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|C Chain C, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
pdb|2D4E|D Chain D, Crystal Structure Of The Hpcc From Thermus Thermophilus
Hb8
Length = 515
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 152/397 (38%), Positives = 213/397 (53%), Gaps = 14/397 (3%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI GEFV S SG+TF ++DP T E + A G + +VD A KAA +AF W R E
Sbjct: 30 FIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQR--WSRTKAKE 87
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK-IHGE 143
R+ +L+ A+ G++ + + AA +YA A+ +
Sbjct: 88 RKRYLLRIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDR 146
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ R YT+R P G VG I PWN P + +++PALA G T+++KPAE +P A
Sbjct: 147 TFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTAT 206
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + K A +P GV N+V GFG AGAA+ +H + ++ TG T+ G+ VM+ AA +L
Sbjct: 207 KLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA-DHL 265
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K +S ELGGKSP L+F D D+ A D + I GE C ASSR+ V+E I+++F K+
Sbjct: 266 KRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKV 325
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXE 383
VE+A+A VG P DP GP + + R+L Y+E GKREGA LL +
Sbjct: 326 VERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGED 385
Query: 384 --------PTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PT+F M IA+ EIFGPV+ + FK
Sbjct: 386 LSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFK 421
>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
pdb|4I8P|B Chain B, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From
Zea Mays (zmamadh1a)
Length = 520
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 151/401 (37%), Positives = 219/401 (54%), Gaps = 9/401 (2%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG--- 75
+ +LF++GE+ G+ ++P T I I G EDVD AV AAR A
Sbjct: 22 VPLRQLFVDGEWRPPAQGRRLPVVNPTTEAHIGEIPAGTAEDVDAAVAAARAALKRNRGR 81
Query: 76 PWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWA--KMGDIPGAANTLRYY 133
W R GA R + A GK + A M D+ G
Sbjct: 82 DWARAPGAVRAKYLRAIAAKVIERKPELAKLEALDCGKPYDEAAWDMDDVAGCFEYFADQ 141
Query: 134 AGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
A A DK + + + + REPIGVVG I PWN+P M K++PALAAGCT ++
Sbjct: 142 AEALDKRQNSPVSLPMETFKCHLRREPIGVVGLITPWNYPLLMATWKIAPALAAGCTAVL 201
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
KP+E + L A + K G+P GVLN+V G GP AGA +++H D+DKV+FTGS + G+
Sbjct: 202 KPSELASVTCLELADICKEVGLPSGVLNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGK 261
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
++M A+A +KPV+LELGGKSP+++FDDVD++ A + L G + G+IC A+SR+ +
Sbjct: 262 KIM-ASAAPMVKPVTLELGGKSPIVVFDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIH 320
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX 372
I +F +++V AK V DP + R GP V + Q+++I +I + K +GAT+LT
Sbjct: 321 TKIAKKFNERMVAWAKNIKVSDPLEEGCRLGPVVSEGQYEKIKKFISNAKSQGATILTGG 380
Query: 373 XXXXXXXXX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPTI T++T M I + E+FGPV+ + +F
Sbjct: 381 VRPAHLEKGFFIEPTIITDITTSMEIWREEVFGPVLCVKEF 421
>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
pdb|3R31|B Chain B, Crystal Structure Of Betaine Aldehyde Dehydrogenase From
Agrobacterium Tumefaciens
Length = 517
Score = 248 bits (634), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 147/391 (37%), Positives = 217/391 (55%), Gaps = 9/391 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI+G++V+ +G FE+I P TGE IA++ V+ A+ +A++A W S
Sbjct: 18 FIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRA--QKEWAAMSPMA 75
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAG-AADKIHGE 143
R I+ + AD GK + D A+ ++ G A ++G+
Sbjct: 76 RGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGD 135
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ + YT R P+GV I WN+P + K +PAL AG M+ KP+E TPL AL
Sbjct: 136 YIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGAL 194
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + AG+P G+ NV+ G T G + +H D+ KVS TGS GR+V AAA +L
Sbjct: 195 KIAEILIEAGLPKGLFNVIQGDRDT-GPLLVNHPDVAKVSLTGSVPTGRKV-AAAAAGHL 252
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K V++ELGGKSP+++FDD D+ +A A+LG ++ G++C +RV+VQ+ F + L
Sbjct: 253 KHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENL 312
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX---XXXXXXXX 380
+ +A ++GDP D A GP V K Q +++LSYIE GK EGATL+T
Sbjct: 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGA 372
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+F +VT+DM IA+ EIFGPVM ++ F
Sbjct: 373 YVQPTVFADVTDDMTIAREEIFGPVMCVLDF 403
>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|C Chain C, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|D Chain D, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|E Chain E, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|F Chain F, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|G Chain G, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
pdb|3EK1|H Chain H, Crystal Structure Of Aldehyde Dehydrogenase From Brucella
Melitensis Biovar Abortus 2308
Length = 504
Score = 247 bits (630), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 147/399 (36%), Positives = 223/399 (55%), Gaps = 7/399 (1%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
K P + ++ +NG ++D+ G T + +P G I + + A+ A+ +A
Sbjct: 25 LKDPSLLKSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS 84
Query: 74 HGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
W + ER GI+ K+ D GK + A+ G++ AA+ + ++
Sbjct: 85 G--WAAKTAKERAGILRKWFDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWF 141
Query: 134 AGAADKIHGEVLKMSRALQGYT-LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
A A +++G+ + + Q T +R+P+GV I PWNFP M K +PALAAGCTMIV
Sbjct: 142 AEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRKAAPALAAGCTMIV 201
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
+PA+ TPL AL LA+ AG+P GVL +V G GA + S+ + K+SFTGST+VGR
Sbjct: 202 RPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGR 261
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+M A + +K +SLELGG +P ++FDD D++ A D A++ N G+ CV ++R+YVQ
Sbjct: 262 LLMAQCAPT-IKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQ 320
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX 372
G+YD+F +KL K K VG+ +P V GP +++K ++ ++IE +GA L+T
Sbjct: 321 RGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLIT-- 378
Query: 373 XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EP I T VT DML+AK E FGP+ L F
Sbjct: 379 GGKELGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAF 417
>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/391 (35%), Positives = 214/391 (54%), Gaps = 5/391 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ INGE++D+ +G+ + +P G+ + + + ++ A+ AA +A W +
Sbjct: 11 QALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTA 68
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
ER I+ + + GK + AK G+I AA+ + ++A +I+G
Sbjct: 69 KERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYG 127
Query: 143 EVLKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ + +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP
Sbjct: 128 DTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFS 187
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
AL A LA AGVP GV NVV G G + S+ + K+SFTGST++GRQ+M+ A
Sbjct: 188 ALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-K 246
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
++K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +
Sbjct: 247 DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAE 306
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
KL + +GD D V GP +D+K ++ +I +GA ++
Sbjct: 307 KLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNF 366
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
+PTI +V + ++K E FGP+ L +FK
Sbjct: 367 FQPTILVDVPANAKVSKEETFGPLAPLFRFK 397
>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|B Chain B, Crystal Structure Of E. Coli Nadp Dependent Enzyme
pdb|3JZ4|D Chain D, Crystal Structure Of E. Coli Nadp Dependent Enzyme
Length = 481
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 137/389 (35%), Positives = 213/389 (54%), Gaps = 5/389 (1%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
INGE++D+ +G+ + +P G+ + + + ++ A+ AA +A W + E
Sbjct: 13 LINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKE 70
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R I+ + + GK + AK G+I AA+ + ++A +I+G+
Sbjct: 71 RATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDT 129
Query: 145 LKMSRALQGY-TLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ +A + +++PIGV I PWNFP M K PALAAGCTM++KPA QTP AL
Sbjct: 130 IPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSAL 189
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A LA AGVP GV NVV G G + S+ + K+SFTGST++GRQ+M+ A ++
Sbjct: 190 ALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA-KDI 248
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K VSLELGG +P ++FDD D++ A + AL N G+ CV ++R+YVQ+G+YD F +KL
Sbjct: 249 KKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKL 308
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXE 383
+ +GD D V GP +D+K ++ +I +GA ++ +
Sbjct: 309 QQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQ 368
Query: 384 PTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PTI +V + ++K E FGP+ L +FK
Sbjct: 369 PTILVDVPANAKVSKEETFGPLAPLFRFK 397
>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1A4S|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|B Chain B, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|C Chain C, Betaine Aldehyde Dehydrogenase From Cod Liver
pdb|1BPW|D Chain D, Betaine Aldehyde Dehydrogenase From Cod Liver
Length = 503
Score = 239 bits (609), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 138/394 (35%), Positives = 212/394 (53%), Gaps = 12/394 (3%)
Query: 25 FINGEFVDSVSGKTFETI-DPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
+ G + S G T E + +P TG + ++ E+VD AV++A+ A+ W + +G
Sbjct: 23 YWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYLK--WSKMAGI 80
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER +ML+ A GK + A+ DI A + YYAG A + G+
Sbjct: 81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQ 139
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+++ YT REP+GV I+ WN+P + K +PALA G ++ KP+ TP+ +
Sbjct: 140 HIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGV 199
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A + AGVP G++NVV G G G+ + H ++ KVSFTGS G++VM+ +A + +
Sbjct: 200 ILAEIFHEAGVPVGLVNVVQG-GAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSAKT-V 257
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
K V+LELGGKSPLLIF D ++ A AL+ +G++C +RV+VQ I +F +++
Sbjct: 258 KHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEV 317
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL------LTXXXXXXX 377
V++ KA VVGDP R G + K Q D++L ++ K+EGA + LT
Sbjct: 318 VKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLK 377
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
P + N +DM K EIFGPVM+++ F
Sbjct: 378 NGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPF 411
>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|B Chain B, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|C Chain C, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
pdb|3U4J|D Chain D, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Sinorhizobium Meliloti
Length = 528
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 150/395 (37%), Positives = 220/395 (55%), Gaps = 5/395 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
+ ++G+ VD+ SG T + + P GE + E +DV AV AAR+AFD GPWPR S
Sbjct: 24 QXLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRXS 83
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
GAER + K AD GK + A+ G+I A+ Y AG A +
Sbjct: 84 GAERSRLXFKVADLILARQEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALE 142
Query: 142 GEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
G+ + G LREP+GVVG I PWNFP + +V A+ +GCT+++KP+E T
Sbjct: 143 GQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSG 202
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
++ A LA+ AG+PDGV NVV G+G AG +A ++D V+FTGS VG ++ + AA
Sbjct: 203 TSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGEIAAR 262
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+ +K V LELGGK P ++F D D++ AAD G+ N G+ C++ SR+ VQEGI D
Sbjct: 263 T-VKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALX 321
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT-XXXXXXXXX 379
++L++ ++ GDP + + G + + +++ SY+ G GA LL
Sbjct: 322 ERLLDISRKVAFGDPLNERTKIGAXISEAHAEKVHSYVTAGITSGAELLLGGERIGREAG 381
Query: 380 XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFKIS 414
PT+F VT D IA+ EIFGPV++ + FK +
Sbjct: 382 LYYAPTVFAGVTPDXSIAREEIFGPVLSTLTFKTA 416
>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde
Dehydrogenase Complexed With Nad+
Length = 495
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 147/394 (37%), Positives = 208/394 (52%), Gaps = 4/394 (1%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
++ KLFI G++ + E P TGE + ++ DVD AV AAR AFD+GPWP
Sbjct: 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPS 66
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
ER ++ G+ + + G+ + Y+AGAADK
Sbjct: 67 TPPHERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADK 126
Query: 140 IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTP 199
+ + Q REP+GVVG I+ WN P + K++PAL AGCT+++KPA +TP
Sbjct: 127 VTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETP 186
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
L A A + G+P+GVL+VVPG G G A+ S+ DID +FTGS+ VGR+V + AA
Sbjct: 187 LTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
LKP +LELGGKS +I +DVD+ A M + + N G+ CV +R+ YDE
Sbjct: 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEI 304
Query: 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXX 379
+ A VG P DPA + GP + +KQ R+ YI G EGA L+
Sbjct: 305 VAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLD 364
Query: 380 XX--XEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+F +V M IA+ EIFGPV+A++ +
Sbjct: 365 NGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPY 398
>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
pdb|3TY7|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase Family Protein
From Staphylococcus Aureus
Length = 478
Score = 226 bits (577), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 139/394 (35%), Positives = 203/394 (51%), Gaps = 10/394 (2%)
Query: 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRF 80
+TK +INGE+V+S S +T E I+P T E I ++A+G+K DVD AV+AA + +
Sbjct: 7 YTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYLE--FRHT 64
Query: 81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
S ER+ ++ K G S ++ L ++ A D +
Sbjct: 65 SVKERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQXG---LNHFVAARDAL 121
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+ R ++E IGV G I PWNFPT +K++ A AAG +++KP+E+TP
Sbjct: 122 DNYEFEERRG-DDLVVKEAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPF 180
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
A+ A + GVP GV N+V G G G ++ H + SFTGS G ++ + AA
Sbjct: 181 AAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXEKAA- 239
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
+ K VSLELGGKSP ++ DDVD+ AA ++ N G++C A +RV V I D F
Sbjct: 240 KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFL 299
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT---XXXXXXX 377
+L E+ VG+P + + GP + KKQFD++ +YI G EGA L
Sbjct: 300 AELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLE 359
Query: 378 XXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PTIF NV IA+ EIFGPV +++ +
Sbjct: 360 KGYFARPTIFINVDNQXTIAQEEIFGPVXSVITY 393
>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|B Chain B, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|C Chain C, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|D Chain D, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|E Chain E, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|F Chain F, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|G Chain G, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|H Chain H, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|I Chain I, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|J Chain J, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|K Chain K, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|L Chain L, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|M Chain M, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|N Chain N, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|O Chain O, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFG|P Chain P, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 1 Of 2
pdb|3IFH|Q Chain Q, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|R Chain R, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|S Chain S, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|T Chain T, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|U Chain U, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|V Chain V, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|W Chain W, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|X Chain X, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Y Chain Y, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|Z Chain Z, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|1 Chain 1, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|2 Chain 2, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|3 Chain 3, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|4 Chain 4, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|5 Chain 5, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
pdb|3IFH|6 Chain 6, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase
From Burkholderia Pseudomallei, Part 2 Of 2
Length = 484
Score = 224 bits (572), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 143/399 (35%), Positives = 212/399 (53%), Gaps = 5/399 (1%)
Query: 14 FKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD 73
K P + + +I GE+ + S TFE DP TGE++ + + + A++AA+ A+
Sbjct: 5 MKDPSLLRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA 64
Query: 74 HGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYY 133
W + ER I+ ++ D GK + AK G+I AA+ + ++
Sbjct: 65 G--WRMKTAKERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWF 121
Query: 134 AGAADKIHGEVLKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192
A ++ G+ L A + ++EPIGV I PWNFP M KV PALAAGC ++V
Sbjct: 122 AEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARKVGPALAAGCPIVV 181
Query: 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252
KPAE TP AL A LA+ AGVP GVL+VV G G I S+ + K+SFTGST VGR
Sbjct: 182 KPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGR 241
Query: 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ 312
+M +A + +K ++LELGG +P ++FDD D++ A + A+ N G+ CV ++R +V
Sbjct: 242 LLMAQSAPT-VKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVH 300
Query: 313 EGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXX 372
E +YD F KL VG + GP +++ ++ S+I +GA+L+T
Sbjct: 301 ERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGG 360
Query: 373 XXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPT+ T V DM +AK E FGP+ L +F
Sbjct: 361 KRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRF 399
>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh
pdb|2W8O|A Chain A, The Crystal Structure Of The Reduced Form Of Human Ssadh
Length = 487
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 139/395 (35%), Positives = 212/395 (53%), Gaps = 11/395 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T F+ G ++ + + TF DP +G A+ +A+ + AV+AA +AF W S
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER ++ K+ + GK A G+I +A L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127
Query: 142 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
G+++ ++ + L++PIGV I PWNFP+ M KV ALAAGCT++VKPAE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQA 257
AL A LA AG+P GV NV+P A G AI + + K+SFTGST G+ ++
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA S +K VS+ELGG +P ++FD +V+ A A+ N G+ CV S++ VQ GI+D
Sbjct: 248 AANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHD 306
Query: 318 EFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
F K E K + VG+ F+ QGP +++K +++ + +GAT++T
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPT+ NVT+DML E FGP+ ++KF
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKF 401
>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh
pdb|2W8Q|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Ssa.
pdb|2W8R|A Chain A, The Crystal Structure Of Human Ssadh In Complex With Nad+
Length = 487
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 138/395 (34%), Positives = 211/395 (53%), Gaps = 11/395 (2%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T F+ G ++ + + TF DP +G A+ +A+ + AV+AA +AF W S
Sbjct: 13 TDSFVGGRWLPAAA--TFPVQDPASGAALGMVADCGVREARAAVRAAYEAFCR--WREVS 68
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
ER ++ K+ + GK A G+I +A L +++ A +++
Sbjct: 69 AKERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVY 127
Query: 142 GEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
G+++ ++ + L++PIGV I PWNFP+ M KV ALAAGCT++VKPAE TP
Sbjct: 128 GDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPF 187
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTA---GAAIASHMDIDKVSFTGSTDVGRQVMQA 257
AL A LA AG+P GV NV+P A G AI + + K+SFTGST G+ ++
Sbjct: 188 SALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA S +K VS+ELGG +P ++FD +V+ A A+ N G+ V S++ VQ GI+D
Sbjct: 248 AANS-VKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHD 306
Query: 318 EFEKKLVEKAKAWV-VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
F K E K + VG+ F+ QGP +++K +++ + +GAT++T
Sbjct: 307 AFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQ 366
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
EPT+ NVT+DML E FGP+ ++KF
Sbjct: 367 LGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKF 401
>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Bartonella Henselae At 2.0a Resolution
Length = 497
Score = 212 bits (540), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 197/393 (50%), Gaps = 7/393 (1%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
K +ING + D + IDP T EA A I+ G D D A+ AA++AF W S
Sbjct: 27 KFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSP 84
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
ER G + K + G A ++ +R + A +
Sbjct: 85 HERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSF 144
Query: 143 EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+ + Q + IGVVG I PWN+P +KV PAL AGCTM++KP+E PL A
Sbjct: 145 QEALIEGNEQAILHYDAIGVVGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSA 204
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + A +P GV N++ G G G+ +++H D++ +SFTGST G+ + + A+ +
Sbjct: 205 MLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNASNT- 263
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
LK V LELGGK +IF D D++ A + +N G+ C A +R+ V++ IYD+ K
Sbjct: 264 LKRVCLELGGKGANIIFADADID-ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKT 322
Query: 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX---XXXXXX 379
+ A+ VG GP V K+Q+D+I I+ G EGATL+T
Sbjct: 323 AKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERG 382
Query: 380 XXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PT+F +V M I + EIFGPV++L+ F
Sbjct: 383 YYVRPTVFADVKPHMRIFREEIFGPVLSLLPFN 415
>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|B Chain B, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|C Chain C, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|D Chain D, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|E Chain E, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|F Chain F, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|G Chain G, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
pdb|3K2W|H Chain H, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From
Pseudoalteromonas Atlantica T6c
Length = 497
Score = 211 bits (536), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 127/391 (32%), Positives = 198/391 (50%), Gaps = 9/391 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI G++V S T + + P TG+ I I G K D + A++ A+ A + +
Sbjct: 16 FIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQKAWA--KLTART 73
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R+ ++ FA+ GKL S A+M ++ A + Y A I G++
Sbjct: 74 RQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDI 132
Query: 145 LKMSRALQG-YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
L + Y + P GVV I WNFP + K+ PAL G TM++KP ++TPL
Sbjct: 133 LPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATT 192
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
+AK AG+PDGVLNV+ G G G + ++ TGST G+Q+ + +A +
Sbjct: 193 ELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIYKTSA-EYM 251
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKL 323
PV LELGGK+P+++ DD D++ AA+ AL G N G++C R+YV +YDEF K
Sbjct: 252 TPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKF 311
Query: 324 VEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX-- 381
+ K VGDP D + GP+ ++++ D I + ++GAT+ T
Sbjct: 312 LPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGG 371
Query: 382 --XEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
EPT+ +V +D ++ E FGP++ ++K
Sbjct: 372 CWYEPTVLVDVKQDNIVVHEETFGPILPIVK 402
>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|E Chain E, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|F Chain F, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|G Chain G, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4DAL|H Chain H, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|4F3X|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|C Chain C, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
pdb|4F3X|D Chain D, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Sinorhizobium Meliloti 1021 Complexed With Nad
Length = 498
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 198/395 (50%), Gaps = 13/395 (3%)
Query: 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFS 81
T+L I F + ++PRTG I +AE +D AV AA +AF W + +
Sbjct: 26 TQLLIGSRFEAGTEAEE-HILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTT 82
Query: 82 GAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIH 141
AER +LK AD GK + K ++P + R++AGA +H
Sbjct: 83 PAERSNALLKIADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLH 142
Query: 142 GEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQT 198
L G+T R+PIG+VG I PWN+P K++PA+ G T++ KP+EQT
Sbjct: 143 APA--AGEYLPGHTSXIRRDPIGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQT 200
Query: 199 PLIALYFAHLAKLAGV-PDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257
PL AL A L +A + P+GV+NV+ G G T G A+ +H + VS TG G++V+ A
Sbjct: 201 PLTALKLARL--IADILPEGVVNVITGRGETVGNALINHPKVGXVSITGDIATGKKVLAA 258
Query: 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYD 317
AA + +K LELGGK+P++++ D D+ + +N G+ C A+ R+Y + GIY+
Sbjct: 259 AAKT-VKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYE 317
Query: 318 EFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEH-GKREGATLLTXXXXXX 376
+ L D GP + ++Q DR+ S++E ++ + T
Sbjct: 318 KLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGS 377
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
+PT+ T++ I + E+FGPV+++ +F
Sbjct: 378 DEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRF 412
>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From
Escherichia Coli
Length = 479
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 195/390 (50%), Gaps = 6/390 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
++I+G+FV + ++P T I+RI +G ED A+ AA +A W
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER + K + GK+ A++ ++ A+ + Y A A + GE
Sbjct: 67 ERASWLRKISAGIRERATEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+++ R + L + +GV I+PWNFP + K++PAL G T+++KP+E TP A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + G+P GV N+V G G T G +A + + VS TGS G ++M A A N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
L E +A G+P + + GP ++ +R+ + EGA +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYY 364
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+ +V ++M I E FGPV+ ++ F
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394
>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase
Length = 479
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 195/390 (50%), Gaps = 6/390 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
++I+G+FV + ++P T I+RI +G ED A+ AA +A W
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER + K + GK+ A++ ++ A+ + Y A A + GE
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+++ R + L + +GV I+PWNFP + K++PAL G T+++KP+E TP A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + G+P GV N+V G G T G +A + + VS TGS G ++M A A N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +
Sbjct: 245 ITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
L E +A G+P + + GP ++ +R+ + EGA +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+ +V ++M I E FGPV+ ++ F
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394
>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Ternary Complex With Product Bound (L)-Lactate
And Nadh.
pdb|2ILU|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E.
Coli: The Binary Complex With Nadph
Length = 479
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/390 (31%), Positives = 195/390 (50%), Gaps = 6/390 (1%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGA 83
++I+G+FV + ++P T I+RI +G ED A+ AA +A W
Sbjct: 9 MYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERA--QPEWEALPAI 66
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
ER + K + GK+ A++ ++ A+ + Y A A + GE
Sbjct: 67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGE 125
Query: 144 VLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202
+++ R + L + +GV I+PWNFP + K++PAL G T+++KP+E TP A
Sbjct: 126 IIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNA 185
Query: 203 LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262
+ FA + G+P GV N+V G G T G +A + + VS TGS G ++M A A N
Sbjct: 186 IAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKN 244
Query: 263 LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322
+ V LELGGK+P ++ DD D+ A + + N G++C + RVYVQ+GIYD+F +
Sbjct: 245 ITKVXLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR 304
Query: 323 LVEKAKAWVVGDPFDPA-VRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
L E +A G+P + + GP ++ +R+ + EGA +
Sbjct: 305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYY 364
Query: 382 XEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
PT+ +V ++M I E FGPV+ ++ F
Sbjct: 365 YPPTLLLDVRQEMSIMHEETFGPVLPVVAF 394
>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WNB|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase (Complexed With Nadh And Betaine
Aldehyde)
pdb|1WND|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|B Chain B, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|C Chain C, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
pdb|1WND|D Chain D, Escherichia Coli Ydcw Gene Product Is A Medium-Chain
Aldehyde Dehydrogenase As Determined By Kinetics And
Crystal Stucture
Length = 495
Score = 199 bits (505), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 142/405 (35%), Positives = 204/405 (50%), Gaps = 13/405 (3%)
Query: 12 SLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA 71
SL+K + KL INGE V S G+ +P TG+ + IAE E VD AV+AA A
Sbjct: 14 SLYKKAGLMQHKLLINGELV-SGEGEKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAA 72
Query: 72 FDHGPWPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGK-LHSWAKMGDIPGAANTL 130
F W + + R +LK AD GK LHS A +IP +
Sbjct: 73 FAE--WGQTTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHS-AFNDEIPAIVDVF 129
Query: 131 RYYAGAADKIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAG 187
R++AGAA ++G L L+G+T R+P+GVV I PWN+P M K++PALAAG
Sbjct: 130 RFFAGAARCLNG--LAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAG 187
Query: 188 CTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+++KP+E TPL AL A LAK P GV+N++ G G T G + H + VS TGS
Sbjct: 188 NCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGS 246
Query: 248 TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASS 307
G ++ A+S +K +ELGGK+P+++FDD D+ + +N G+ C A+
Sbjct: 247 IATGEHIISHTASS-IKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAAC 305
Query: 308 RVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367
R+Y Q+GIYD +KL G P D + GP +R+ +E K G
Sbjct: 306 RIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHI 365
Query: 368 -LLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
++T PT+ +D I + E+FGPV+++ F
Sbjct: 366 KVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPF 410
>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|B Chain B, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|C Chain C, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
pdb|1T90|D Chain D, Crystal Structure Of Methylmalonate Semialdehyde
Dehydrogenase From Bacillus Subtilis
Length = 486
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 130/397 (32%), Positives = 197/397 (49%), Gaps = 7/397 (1%)
Query: 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPW 77
EI+ K +INGE+V+S + + + ++P T E + ++ KED+D A + A +AF W
Sbjct: 2 EIRKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TW 59
Query: 78 PRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAA 137
+ + R I+ F GK ++ +G++ + + AGA
Sbjct: 60 SKVAVPRRARILFNFQQLLSQHKEELAHLITIENGK-NTKEALGEVGRGIENVEFAAGAP 118
Query: 138 DKIHGEVL-KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
+ G+ L ++ ++ R PIGVVG I P+NFP + A+A G T I+KP+E
Sbjct: 119 SLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSE 178
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+TPL+ L + AG+P GV NVV G I H +I +SF GS VG V +
Sbjct: 179 RTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNG-ILEHPEIKAISFVGSKPVGEYVYK 237
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
+ NLK V G K+ ++ +D ++ + + GE C+A + V V+EGI
Sbjct: 238 KG-SENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGIA 296
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTX-XXXX 375
DEF KL EK +G+ D V GP + + R LSYIE G EGA L+
Sbjct: 297 DEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENV 356
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PTIF NVT +M I K+EIF PV+++++ K
Sbjct: 357 SDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVK 393
>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|B Chain B, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|C Chain C, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
pdb|3R64|D Chain D, Crystal Structure Of A Nad-Dependent Benzaldehyde
Dehydrogenase From Corynebacterium Glutamicum
Length = 508
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 198/395 (50%), Gaps = 9/395 (2%)
Query: 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWP 78
I TK I G++V+ S + I+P IA + DVD A +AA++A W
Sbjct: 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKA--QAEWA 67
Query: 79 RFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAAD 138
AER I+ + A+ G S A + +I A N + A
Sbjct: 68 ATPAAERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPG 126
Query: 139 KIHGEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197
++HG + + + R GVVG I PWNFP + V+PALA G +++KPA
Sbjct: 127 RVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASD 186
Query: 198 TPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
TP+ + A + + AGVP GV++ V G G G +H +SFTGST VGR+V +
Sbjct: 187 TPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGE 246
Query: 257 AAATSN-LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
A +K V+LELGG +P ++ D D++ AA A +G ++G+IC++ +RV V +
Sbjct: 247 LAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAV 306
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
+DEF +K VE K GDP GP ++ Q + IE K+EGAT+
Sbjct: 307 HDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATV---QVEG 363
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
P +F++VT DM IA+ EIFGP+++++K
Sbjct: 364 PIEGRLVHPHVFSDVTSDMEIAREEIFGPLISVLK 398
>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
pdb|3QAN|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Halodurans
Length = 538
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 199/395 (50%), Gaps = 15/395 (3%)
Query: 24 LFINGEFVDSVSGKTFETIDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
L INGE V + ++ +P R + + +++ +++ + A+++A +AF W +
Sbjct: 40 LIINGERV--TTEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNP 95
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAGAADKIH 141
ER I++K A GK W + D A + L YYA +++
Sbjct: 96 EERANILVKAAAIIRRRKHEFSAWLVHEAGK--PWKEADADTAEAIDFLEYYARQMIELN 153
Query: 142 GEVLKMSR-ALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
+SR Q P+GV I PWNF + + G T+++KPA TP+
Sbjct: 154 RGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPV 213
Query: 201 IALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260
+A F + + AG+P GV+N VPG G G + H ++FTGS DVG ++ + AA
Sbjct: 214 VAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAV 273
Query: 261 -----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI 315
++LK V +E+GGK +++ D D++ AA+ L+ G+ C A SR + + +
Sbjct: 274 VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDV 333
Query: 316 YDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXX 375
YDE +K V AK VGDP + GP +D+K F++I+SYIE GK+EG L+T
Sbjct: 334 YDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGD 392
Query: 376 XXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
+PTI ++ + +I + EIFGPV+A K
Sbjct: 393 SSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSK 427
>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
pdb|3RH9|B Chain B, The Crystal Structure Of Oxidoreductase From Marinobacter
Aquaeolei
Length = 506
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 123/392 (31%), Positives = 194/392 (49%), Gaps = 10/392 (2%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFD-HGPWPRFSGA 83
+I G + DS G TF+ +P TG IA++ +EDV AV+A + A PWP +
Sbjct: 15 YIGGRWKDSAGGATFDVYNPATGSVIAKVPSXPEEDVVAAVEAGQSALRLTNPWPIET-- 72
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAK-MGDIPGAANTLRYYAGAADKIHG 142
RR + D GK W + G++ AA Y A +
Sbjct: 73 -RRKWLEDIRDGLKENREEIGRILCXEHGK--PWKEAQGEVDYAAGFFDYCAKHISALDS 129
Query: 143 EVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLI 201
+ +T+ P+GV G I+PWNFP K+S ALAAGC ++KPA +TPL
Sbjct: 130 HTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGXIAKKLSAALAAGCPSVIKPASETPLT 189
Query: 202 ALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS 261
+ F + +PDG +N+V G G + H D+ +SFTGST+VGR+++ A
Sbjct: 190 XIAFFSVXDKLDLPDGXVNLVXGKASVIGKVLCEHKDVPXLSFTGSTEVGRKLIVDTA-E 248
Query: 262 NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321
+K ++LELGG +P ++FDD D+ AAD + G+ CV ++R++V E + D F +
Sbjct: 249 QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQ 308
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
KL E+ VGD + + GP ++K+ FD++ +++ +GA+L+
Sbjct: 309 KLAERVNKXTVGDGXNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGL 368
Query: 382 -XEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PT+ V + + E FGP++ F+
Sbjct: 369 FFPPTVVQGVDREXCCYQEETFGPLVPXALFR 400
>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|B Chain B, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|C Chain C, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|1EUH|D Chain D, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From
Streptococcus Mutans
pdb|2EUH|A Chain A, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|B Chain B, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|C Chain C, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|2EUH|D Chain D, Holo Form Of A Nadp Dependent Aldehyde Dehydrogenase
Complex With Nadp+
pdb|1QI6|A Chain A, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|B Chain B, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|C Chain C, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
pdb|1QI6|D Chain D, Second Apo Form Of An Nadp Dependent Aldehyde
Dehydrogenase With Glu250 Situated 3.7 A From Cys284
Length = 475
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 118/397 (29%), Positives = 183/397 (46%), Gaps = 18/397 (4%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
P +F VT DM +A E FGPV+ +++
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIR 387
>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|B Chain B, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|C Chain C, Gapn T244s Mutant X-Ray Structure At 2.5 A
pdb|2ID2|D Chain D, Gapn T244s Mutant X-Ray Structure At 2.5 A
Length = 475
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 183/397 (46%), Gaps = 18/397 (4%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++F+GST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
P +F VT DM +A E FGPV+ +++
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIR 387
>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|B Chain B, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|C Chain C, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2ESD|D Chain D, Crystal Structure Of Thioacylenzyme Intermediate Of An
Nadp Dependent Aldehyde Dehydrogenase
pdb|2QE0|A Chain A, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|B Chain B, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|C Chain C, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement.
pdb|2QE0|D Chain D, Thioacylenzyme Intermediate Of Gapn From S. Mutans, New
Data Integration And Refinement
Length = 475
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 182/397 (45%), Gaps = 18/397 (4%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ L LGGK ++ +D D+ A + G G+ C A RV V E
Sbjct: 238 IGKMAG---MRPIMLALGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
P +F VT DM +A E FGPV+ +++
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIR 387
>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|B Chain B, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|C Chain C, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|D Chain D, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|E Chain E, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|F Chain F, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|G Chain G, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
pdb|3RJL|H Chain H, Crystal Structure Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Bacillus Licheniformis (Target
Nysgrc-000337)
Length = 538
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 185/390 (47%), Gaps = 17/390 (4%)
Query: 34 VSGKTFET------IDP-RTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86
+ G+ +ET I+P E + +++ ++ + A++AA +AF+ W ER
Sbjct: 42 IDGERYETENKIVSINPANKEEVVGTVSKATQDHAEKAIQAAAKAFE--TWRYTDPEERA 99
Query: 87 GIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI-HGEVL 145
++ + GK + A D A + + YYA ++ G+ +
Sbjct: 100 AVLFRAVAKVRRKKHEFSALLVKEAGKPWNEAD-ADTAEAIDFMEYYARQMIELAKGKPV 158
Query: 146 KMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205
+ + P GV I PWNF + + G T+++KPA P+IA F
Sbjct: 159 NSREGERNQYVYTPTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKF 218
Query: 206 AHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA-----T 260
+ + +G+P GV+N VPG G G + H ++FTGS +VG ++ + AA
Sbjct: 219 VEVLEESGLPKGVVNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQ 278
Query: 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320
++LK V E+GGK +++ +D D+ AA G+ C A SR V E +YDE
Sbjct: 279 THLKQVIAEMGGKDTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVL 338
Query: 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXX 380
K+++E ++ VG+P V GP +D+ F++I+ YIE GK EG L++
Sbjct: 339 KRVIEITESKKVGEPDSADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGY 397
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
EPTIF ++ + + EIFGPV+A K
Sbjct: 398 FIEPTIFADLDPKARLMQEEIFGPVVAFSK 427
>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|B Chain B, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|C Chain C, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
pdb|1QI1|D Chain D, Ternary Complex Of An Nadp Dependent Aldehyde
Dehydrogenase
Length = 475
Score = 162 bits (410), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 117/397 (29%), Positives = 182/397 (45%), Gaps = 18/397 (4%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
K K ++NGE+ +S + +P +G + + E+VD +A++A W
Sbjct: 3 KQYKNYVNGEW--KLSENEIKIYEPASGAELGSVPAMSTEEVDYVYASAKKA--QPAWRA 58
Query: 80 FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADK 139
S ER + K AD K + A + ++ A + Y A +
Sbjct: 59 LSYIERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSA-VSEVVRTAEIINYAAEEGLR 117
Query: 140 IHGEVLK------MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
+ GEVL+ S+ REP+G+V I P+N+P + K++PAL AG + K
Sbjct: 118 MEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFK 177
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
P Q + L A AG+P GV N + G G G I H ++ ++FTGST +G +
Sbjct: 178 PPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237
Query: 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE 313
+ + A ++P+ LELGGK ++ +D D+ A + G G+ A RV V E
Sbjct: 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVME 294
Query: 314 GIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXX 373
+ DE +K+ EK A +G+P D A P +D K D + I +GAT LT
Sbjct: 295 SVADELVEKIREKVLALTIGNPEDDA-DITPLIDTKSADYVEGLINDANDKGATALTEIK 353
Query: 374 XXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
P +F VT DM +A E FGPV+ +++
Sbjct: 354 REGNLIC---PILFDKVTTDMRLAWEEPFGPVLPIIR 387
>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3PRL|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125
pdb|3RHH|A Chain A, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|B Chain B, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|C Chain C, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
pdb|3RHH|D Chain D, Crystal Structure Of Nadp-Dependent
Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus
Halodurans C-125 Complexed With Nadp
Length = 505
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 189/396 (47%), Gaps = 16/396 (4%)
Query: 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSG 82
+ NGE+V+S +G+ P +G A+ I +E+V+ A++ A+ A W
Sbjct: 13 NILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDA--QKIWKIRPI 70
Query: 83 AERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG 142
ER ++ +AD K A +G++ A+ +R+ A A +++G
Sbjct: 71 HERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSA-IGEVSRTADIIRHTADEALRLNG 129
Query: 143 EVLKMSRALQGYTL------REPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAE 196
E LK + G + REP+GVV I P+N+P + K++PAL G T++ KPA
Sbjct: 130 ETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPAT 189
Query: 197 QTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
Q L + AG P+G++ VV G G G + H ID ++FTG T G ++ +
Sbjct: 190 QGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISE 249
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
A + PV LELGGK P ++ DD D+ A + G G+ C A RV+VQ+ +
Sbjct: 250 KA---KMIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVA 306
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
D+ + E + VG P D A P +D+K I I+ GATLL+
Sbjct: 307 DQLVANIKELVEQLTVGSPEDDA-DITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQG 365
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
PT+ +VT M +A E FGPV+ +++ K
Sbjct: 366 NLLS---PTLLDDVTPAMRVAWEEPFGPVLPIIRVK 398
>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
pdb|4DNG|B Chain B, Crystal Structure Of Putative Aldehyde Dehydrogenase From
Bacillus Subtilis Subsp. Subtilis Str. 168
Length = 485
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 191/404 (47%), Gaps = 32/404 (7%)
Query: 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAI--ARIAEGDK-EDV-DLAVKAARQAFDHGP 76
K FING++ SG+T + ++P I A +A G + ED D+A KA ++
Sbjct: 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQKE------ 59
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGK--LHSWAKMGDIPGAANTLRYYA 134
W + + +R+ ++ K G + S ++ + Y
Sbjct: 60 WAKSTTEDRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTIELEQTIAILDEAMTYT 119
Query: 135 GAADKIHGEVLKMSRALQGYT---LREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191
G G V ++ ++G T R P+GV+ I P+NFP + ++PA+A G +++
Sbjct: 120 GEL----GGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMRSIAPAIALGNSVV 175
Query: 192 VKPAEQT-----PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTG 246
KP QT +IA F H AG+P GVLNV+ G + ++ +SFTG
Sbjct: 176 HKPDIQTAISGGTIIAKAFEH----AGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231
Query: 247 STDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVAS 306
ST VGR + + A + K ++LELGG +P + D DV+ A D A+ G ++G+IC+
Sbjct: 232 STAVGRHIGEIAGRA-FKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMII 290
Query: 307 SRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGA 366
+R+ V + +YDEF +K + K GD DP GP ++++Q ++ L IE K +G
Sbjct: 291 NRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGI 350
Query: 367 TLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
L P +F + IA+ E+F P+ ++K
Sbjct: 351 ELAVEGKRVGNVLT---PYVFVGADNNSKIAQTELFAPIATIIK 391
>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3PQA|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661
pdb|3RHD|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|B Chain B, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|C Chain C, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
pdb|3RHD|D Chain D, Crystal Structure Of Glyceraldehyde-3-Phosphate
Dehydrogenase Gapn From Methanocaldococcus Jannaschii
Dsm 2661 Complexed With Nadp
Length = 486
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 186/394 (47%), Gaps = 24/394 (6%)
Query: 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRF 80
+FI+G++++ + + I+P + E I +I +E+ A+ A ++ + P +
Sbjct: 2 MFIDGKWINR---EDMDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKEVMKNLPITK- 57
Query: 81 SGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKI 140
R I++ A GK A++ ++ + T + A +
Sbjct: 58 ----RYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEH 112
Query: 141 HGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPL 200
EV+ L +T REP+G+VG I P+NFP + K++PA+A G ++ P+ + PL
Sbjct: 113 RDEVIPSDDRLI-FTRREPVGIVGAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPL 171
Query: 201 IALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256
+ + A + + A VP GV N++ G G G I + ++ +SFTGS+ VG + +
Sbjct: 172 VCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITK 231
Query: 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY 316
A K ++LELGG +P ++ D D+N A + + G G++C++ + V E I
Sbjct: 232 KAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIA 288
Query: 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXX 376
D+F + V KAK VG+P D GP + + + + +E EG LL
Sbjct: 289 DKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDK 348
Query: 377 XXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMK 410
PTI V D ++ K E F PV+ +++
Sbjct: 349 ALFY---PTIL-EVDRDNILCKTETFAPVIPIIR 378
>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|B Chain B, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|C Chain C, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|D Chain D, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|E Chain E, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|F Chain F, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|G Chain G, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
pdb|2JG7|H Chain H, Crystal Structure Of Seabream Antiquitin And Elucidation
Of Its Substrate Specificity
Length = 510
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 178/385 (46%), Gaps = 14/385 (3%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFAD 94
SG+ + P E IAR+ + + + V+ R+A+ W +R I+ + D
Sbjct: 33 SGEVITSYCPANNEPIARVTQATLAEYEETVQKTREAWKM--WADIPAPKRGEIVRQIGD 90
Query: 95 XXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGY 154
GK++ +G++ + Y G + I G VL R G+
Sbjct: 91 ALRKKIKVLGSLVSLEMGKIYV-EGVGEVQEYVDVCDYAVGLSRMIGGPVLPSERP--GH 147
Query: 155 TLRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAH 207
L E P+G+VG I +NFP ++ + AL G + K A TPL ++ A
Sbjct: 148 ALIEQWNPVGLVGIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAE 207
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
+ + +P + ++ G G G A+A +D +SFTGST VG+ V + +
Sbjct: 208 VLEQNNLPGAICSMTCG-GADIGTAMAKDERVDLLSFTGSTHVGKMVAMMVQERFGRKL- 265
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
LELGG + +++F+D D+N A+ + G+ C + R+ + E ++D +++ +
Sbjct: 266 LELGGNNAIIVFEDADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAY 325
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
K +GDP+DP+ GP K+ D+ L+ IE K++G TL+ EPTI
Sbjct: 326 KQVRIGDPWDPSTLYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTII 385
Query: 388 TNVTEDMLIAKNEIFGPVMALMKFK 412
T + D I E F P++ ++KFK
Sbjct: 386 TGLAHDAPIVHTETFVPILYVLKFK 410
>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|B Chain B, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|C Chain C, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|D Chain D, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|E Chain E, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|F Chain F, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|G Chain G, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
pdb|2J6L|H Chain H, Structure Of Aminoadipate-Semialdehyde Dehydrogenase
Length = 500
Score = 145 bits (365), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 177/387 (45%), Gaps = 20/387 (5%)
Query: 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADX 95
G+ T P E IAR+ + D + VK AR+A+ W +R I+ + D
Sbjct: 36 GEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDA 93
Query: 96 XXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYT 155
GK+ +G++ + Y G + I G +L R+ G+
Sbjct: 94 LREKIQVLGSLVSLEMGKILV-EGVGEVQEYVDICDYAVGLSRMIGGPILPSERS--GHA 150
Query: 156 LRE---PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHL 208
L E P+G+VG I +NFP ++ + A+ G + K A T LI++ A +
Sbjct: 151 LIEQWNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKV 210
Query: 209 AKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV---MQAAATSNLKP 265
+ +P + ++ G G G A+A ++ +SFTGST VG+QV +Q +L
Sbjct: 211 LEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFGRSL-- 267
Query: 266 VSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVE 325
LELGG + ++ F+D D++ AL + G+ C + R+++ E I+DE +L +
Sbjct: 268 --LELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKK 325
Query: 326 KAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPT 385
VG+P+DP V GP K+ L +E K+EG T++ EPT
Sbjct: 326 AYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPT 385
Query: 386 IFTNVTEDMLIAKNEIFGPVMALMKFK 412
I T + D IA E F P++ + KF+
Sbjct: 386 IVTGLGHDASIAHTETFAPILYVFKFQ 412
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 153/299 (51%), Gaps = 11/299 (3%)
Query: 122 DIPGAANTLRYYAGAADKIHGEVLKMSRA---LQGYTLREPIGVVGHIIPWNFPTTMFFM 178
D+ A + L YYA ++ G+ ++ A L Y EP GV I PWNFP +
Sbjct: 628 DVTEAIDFLEYYAREMIRL-GQPQRVGHAPGELNHY-FYEPKGVAAVIAPWNFPLAISMG 685
Query: 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMD 238
S A+ G ++ KP+ T +I + L + AG+P+GV N PG G G + H D
Sbjct: 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPD 745
Query: 239 IDKVSFTGSTDVGRQVMQAAA-----TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALL 293
I ++FTGS + G ++++ AA +N+K + E+GGK+ ++I DD D++ A L
Sbjct: 746 ISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLY 805
Query: 294 GILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDR 353
+G+ C A SRV V + +YD+F ++LV AKA VG DPA G D K
Sbjct: 806 SAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKS 865
Query: 354 ILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
I Y E GKREG +L TI + + IA+ EIFGPV+A+M+ K
Sbjct: 866 IKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923
>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|1UZB|B Chain B, 1-pyrroline-5-carboxylate Dehydrogenase
pdb|2EIW|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
pdb|2EIW|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Proline
Length = 516
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 168/344 (48%), Gaps = 12/344 (3%)
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
W + +R ++LK A GK +W + D+ A + + YYA
Sbjct: 90 WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AA + +++ + P+G I PWNFP +F + +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
PAE ++ + AG P GV+N +PG G GA + H I ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
+ +AA + K +E GGK+ +++ + D + AA+ ++ +G+ C A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368
+ + +G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 369 LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
L PT+FT V IA+ EIFGPV+++++ K
Sbjct: 387 LGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BHP|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad.
pdb|2BJK|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2BJK|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Citrate.
pdb|2IY6|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2IY6|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With
Bound Citrate
pdb|2EHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadp
pdb|2EJ6|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2EJ6|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
D-Proline
pdb|2BHQ|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2BHQ|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Product Glutamate.
pdb|2J5N|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2J5N|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophirus With Bound Inhibitor Glycine And Nad.
pdb|2EIT|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EIT|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine And Nad
pdb|2EHU|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EHU|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nad And Inhibitor
L-Serine
pdb|2EII|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad.
pdb|2EII|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Valine And Nad
Length = 516
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 12/344 (3%)
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
W + +R ++LK A GK +W + D+ A + + YYA
Sbjct: 90 WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AA + +++ + P+G I PWNFP +F + +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
PAE ++ + AG P GV+N +PG G GA + H I ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
+ +AA + K +E GGK +++ + D + AA+ ++ +G+ C A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368
+ + +G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 369 LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
L PT+FT V IA+ EIFGPV+++++ K
Sbjct: 387 LGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2BJA|B Chain B, Crystal Analysis Of 1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus With Bound Nadh
pdb|2J40|A Chain A, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2J40|B Chain B, 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus
Thermophilus With Bound Inhibitor L-Proline And Nad.
pdb|2EJD|A Chain A, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJD|B Chain B, Crystal Analysis Of Delta1-Pyrroline-5-Carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-Alanine
pdb|2EJL|A Chain A, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
pdb|2EJL|B Chain B, Crystal Analysis Of Delta1-pyrroline-5-carboxylate
Dehydrogenase From Thermus Thermophilus With Bound
L-serine
Length = 516
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 166/344 (48%), Gaps = 12/344 (3%)
Query: 77 WPRFSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKM-GDIPGAANTLRYYAG 135
W + +R ++LK A GK +W + D+ A + + YYA
Sbjct: 90 WKDWPQEDRSRLLLKAAALMRRRKRELEATLVYEVGK--NWVEASADVAEAIDFIEYYAR 147
Query: 136 AADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVK 193
AA + +++ + P+G I PWNFP +F + +A G T+I K
Sbjct: 148 AALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAK 207
Query: 194 PAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253
PAE ++ + AG P GV+N +PG G GA + H I ++FTGS +VG +
Sbjct: 208 PAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLK 267
Query: 254 VMQAA-----ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR 308
+ +AA + K +E GGK +++ + D + AA+ ++ +G+ A+SR
Sbjct: 268 IYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLAAEGVVVSAYGFQGQKXSAASR 327
Query: 309 VYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368
+ + +G Y+ ++++++A+ VG P + GP V +Q ++LSYIE GK EG +
Sbjct: 328 LILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV 386
Query: 369 LTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
L PT+FT V IA+ EIFGPV+++++ K
Sbjct: 387 LGGKRLEGEGYFIA-PTVFTEVPPKARIAQEEIFGPVLSVIRVK 429
>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating
Glyceraldehyde-3- Phosphate Dehydrogenase
Length = 501
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 173/388 (44%), Gaps = 20/388 (5%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR--FSGAERRGIMLKF 92
SG+ E P IA++ +E+V+ + F G W G ER ++ K
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93 ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
AD GK S A +G++ A + LR KI G+ +
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
AG P + ++ G A +A + VSFTGST+VG +V++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
+ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++ ++
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
+ VGDP DP V GP + D +++ IE +G +L +PT+
Sbjct: 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTLV 379
Query: 388 ---TNVTEDMLIAKNEIFGPVMALMKFK 412
+ +DM++ K E+F PV + ++ K
Sbjct: 380 EAPADRVKDMVLYKREVFAPVASAVEVK 407
>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|B Chain B, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|C Chain C, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|D Chain D, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|E Chain E, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|F Chain F, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|G Chain G, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
pdb|4E4G|H Chain H, Crystal Structure Of Putative Methylmalonate-Semialdehyde
Dehydrogenase From Sinorhizobium Meliloti 1021
Length = 521
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 125/395 (31%), Positives = 176/395 (44%), Gaps = 13/395 (3%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAE 84
FI+G+ V SG+ +P TGE +A D DLA W +
Sbjct: 30 FIDGKRVAGTSGRVSNIFNPATGEVQGTVAL--ASDADLAAAVESAKAAQPKWAATNPQR 87
Query: 85 RRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV 144
R + KF GK AK GDI + G E
Sbjct: 88 RARVFXKFVQLLNDNXNELAEXLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKSEF 146
Query: 145 LK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+ + Y++R+P+G+ I P+NFP + +PA+A G I+KP+E+ P + +
Sbjct: 147 TEGAGPGIDXYSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPI 206
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
A L AG+P G+LNVV G A AI +H DI VSF GST + R V AA N
Sbjct: 207 RLAELXIEAGLPAGILNVVNG-DKGAVDAILTHPDIAAVSFVGSTPIARYVYGTAAX-NG 264
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILF-NKGEICVA-SSRVYVQEGIYDEFEK 321
K G K+ +I D D++ AA+ AL+G + + GE C A S V V E +
Sbjct: 265 KRAQCFGGAKNHXIIXPDADLDQAAN-ALIGAGYGSAGERCXAISVAVPVGEETANRLID 323
Query: 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXX 381
KLV ++ +G D GP V K+ RI S I+ G +GA L+
Sbjct: 324 KLVPXVESLRIGPYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYE 383
Query: 382 XEPTI----FTNVTEDMLIAKNEIFGPVMALMKFK 412
I F +VT D I K EIFGPV+++++ +
Sbjct: 384 NGHFIGGCLFDDVTPDXDIYKTEIFGPVLSVVRAR 418
>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 172/388 (44%), Gaps = 20/388 (5%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR--FSGAERRGIMLKF 92
SG+ E P IA++ +E+V+ + F G W G ER ++ K
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93 ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
AD GK S A +G++ A + LR KI G+ +
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
AG P + ++ G A +A + VSFTGST+VG +V++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
+ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++ ++
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
+ VGDP DP V GP + D +++ IE +G +L +PT+
Sbjct: 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTLV 379
Query: 388 ---TNVTEDMLIAKNEIFGPVMALMKFK 412
+ +DM++ K E+F PV ++ K
Sbjct: 380 EAPADRVKDMVLYKREVFAPVALAVEVK 407
>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXP|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXQ|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXR|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
pdb|1UXT|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-phosphorylating
Glyceraldehyde-3-phosphate Dehydrogenase (gapn) From
Thermoproteus Tenax
pdb|1UXU|A Chain A, Structural Basis For Allosteric Regulation And Substrate
Specificity Of The Non-Phosphorylating
Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From
Thermoproteus Tenax
Length = 501
Score = 125 bits (313), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/388 (27%), Positives = 171/388 (44%), Gaps = 20/388 (5%)
Query: 35 SGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR--FSGAERRGIMLKF 92
SG+ E P IA++ +E+V+ + F G W G ER ++ K
Sbjct: 30 SGQEIEVKSPIDLATIAKVISPSREEVERTLDVL---FKRGRWSARDMPGTERLAVLRKA 86
Query: 93 ADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----- 147
AD GK S A +G++ A + LR KI G+ +
Sbjct: 87 ADIIERNLDVFAEVLVMNAGKPKS-AAVGEVKAAVDRLRLAELDLKKIGGDYIPGDWTYD 145
Query: 148 SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH 207
+ +G REP+GVV I P+N+P K++ + G ++VKP+ PL A
Sbjct: 146 TLETEGLVRREPLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVK 205
Query: 208 LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVS 267
AG P + ++ G A +A + VSFTGST+VG +V++ +K
Sbjct: 206 ALLDAGFPPDAIALLNLPGKEAEKIVADDR-VAAVSFTGSTEVGERVVK---VGGVKQYV 261
Query: 268 LELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA 327
+ELGG P ++ +D D++ AAD GI G+ C A V + +Y + +++ ++
Sbjct: 262 MELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRL 321
Query: 328 KAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIF 387
+ VGDP DP V GP + D +++ IE +G +L +PT
Sbjct: 322 SSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLA--GGRRLGPTYVQPTFV 379
Query: 388 ---TNVTEDMLIAKNEIFGPVMALMKFK 412
+ +DM++ K E+F PV ++ K
Sbjct: 380 EAPADRVKDMVLYKREVFAPVALAVEVK 407
>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|B Chain B, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|C Chain C, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis.
pdb|4H7N|D Chain D, The Structure Of Putative Aldehyde Dehydrogenase Puta From
Anabaena Variabilis
Length = 474
Score = 124 bits (311), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/256 (33%), Positives = 123/256 (48%), Gaps = 9/256 (3%)
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPD-- 216
P +VG I PWNFP T+ + PAL AGC ++VKP+E P L L VP+
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAPRFVAPL--LXALNTVPELR 183
Query: 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL 276
VL V G G T GA + +++D V FTGS GR+V + AA P LELGGK P
Sbjct: 184 DVLIFVEGGGET-GANLINYVDF--VCFTGSVATGREVAETAA-RRFIPAYLELGGKDPA 239
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336
++ + ++ A L G + N G+ C++ R+YV E ++EF +L+ KA + P
Sbjct: 240 IVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPL 299
Query: 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATL-LTXXXXXXXXXXXXEPTIFTNVTEDML 395
GP + +KQ I +I +GA + PT+ TNV
Sbjct: 300 VEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVXTNVNHSXK 359
Query: 396 IAKNEIFGPVMALMKF 411
+ E FGP+ + F
Sbjct: 360 VXTEETFGPIXPVXPF 375
>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
pdb|3HAZ|B Chain B, Crystal Structure Of Bifunctional Proline Utilization A
(Puta) Protein
Length = 1001
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/301 (31%), Positives = 143/301 (47%), Gaps = 18/301 (5%)
Query: 120 MGDIPGAANTLRYYAGAADKIHGEVLKM------SRALQGYTLREPIGVVGHIIPWNFPT 173
+ ++ AA+ RYYA K+ G M S AL T+R GV I PWNFP
Sbjct: 608 LSELREAADFCRYYAAQGRKLFGSETAMPGPTGESNAL---TMRGR-GVFVAISPWNFPL 663
Query: 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAI 233
+F +V+ AL AG +++ KPAEQTP IA L AG+P L +V G G GAA+
Sbjct: 664 AIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDG-RIGAAL 722
Query: 234 ASHMDIDKVSFTGSTDVGRQVMQAAATSN--LKPVSLELGGKSPLLIFDDVDVNTAADMA 291
+H DI V FTGST+V R + +A A + + P+ E GG + ++ AD
Sbjct: 723 TAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDV 782
Query: 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351
+ + G+ C A ++VQE + D + + A+ +GDP D A GP +D +
Sbjct: 783 VTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAK 842
Query: 352 DRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411
R+ ++I K E P IF L E+FGP++ ++++
Sbjct: 843 QRLDAHIARMKTEARLHFAGPAPEGCFVA---PHIFELTEAGQLT--EEVFGPILHVVRY 897
Query: 412 K 412
+
Sbjct: 898 R 898
>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase
From Lactobacillus Acidophilus
Length = 484
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/373 (26%), Positives = 159/373 (42%), Gaps = 17/373 (4%)
Query: 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXX 98
+++++P T EA A + +D A+ A + W A R I+ A+
Sbjct: 6 YQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYKK--WRHEEPASRAEILHDIANALKE 63
Query: 99 XXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHG-EVLKMSRAL----QG 153
GKL S +K ++ + YYA HG E LK ++
Sbjct: 64 HEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYAD-----HGPEXLKPTKLNSDLGNA 117
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y L++ GV+ PWNFP +P G +++K A P A A + K AG
Sbjct: 118 YYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAG 177
Query: 214 VPDGVL-NVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
P+G L N+ P + A I + I V+ TGS G V +AA NLK + ELGG
Sbjct: 178 APEGSLINLYPSYDQLAD--IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTXELGG 234
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332
++ DD D ++ +N G++C +S R+ V++ YDE +L
Sbjct: 235 NDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKA 294
Query: 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTE 392
GDP + P +K +++ + ++ GA + PTI T++ +
Sbjct: 295 GDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAK 354
Query: 393 DMLIAKNEIFGPV 405
D + E+FGP+
Sbjct: 355 DNPVFDKEVFGPI 367
>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
pdb|3LV1|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+
Length = 457
Score = 115 bits (287), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 131/261 (50%), Gaps = 15/261 (5%)
Query: 152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211
+ Y ++EP GV I P+N+P + + A+ G T I+KP+E TP + +
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
A P+ V V+ G G + + S + D + FTGS +VG+ VMQAAA +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
GK PL++ D D++ + + G N G+ C+A +YV + D ++LVE+ K +
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKTEL 298
Query: 332 VGDPFDPAVRQ-GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 390
P + G V ++Q R++S +E +G L+ T+ V
Sbjct: 299 ------PEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQADVSKRALSA--TVVDGV 348
Query: 391 TEDMLIAKNEIFGPVMALMKF 411
+ + E+FGP++ +++F
Sbjct: 349 EWNDPLMSEELFGPILPVLEF 369
>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa.
pdb|3JU8|B Chain B, Crystal Structure Of Succinylglutamic Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 490
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 171/392 (43%), Gaps = 12/392 (3%)
Query: 25 FINGEFVDSVSGKTFETIDPRTGEAIARIAEG-DKEDVDLAVKAARQAFDHGPWPRFSGA 83
+I G+++ G+T E++DP G+ + G D VD AV AAR+AF W R
Sbjct: 9 YIAGQWLAG-QGETLESLDP-VGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLE 64
Query: 84 ERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE 143
+R ++ +FA GK W ++ N + A + GE
Sbjct: 65 QRIELLERFAATLKSRADELARVIGEETGK-PLWESATEVTSXVNKVAISVQAFRERTGE 123
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203
+P GVV P+NFP + + PAL AG ++ KP+E TP +A
Sbjct: 124 KSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAE 183
Query: 204 YFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNL 263
AG+P GVLN+V G G G A+A+H +D + FTGS+ G +
Sbjct: 184 LTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQ 242
Query: 264 KPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIY-DEFEKK 322
K ++LE GG +PL++ + D++ A + + G+ C + R+ V +G + D +
Sbjct: 243 KILALEXGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR 302
Query: 323 LVEKAKAWVVGDPFD--PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXX 380
LV + VG FD PA G + + +L EH +GA L
Sbjct: 303 LVAVSATLRVGR-FDEQPAPFXGAVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAA 361
Query: 381 XXEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412
P I +V+ E FGP++ ++++
Sbjct: 362 LLTPGIL-DVSAVAERPDEEFFGPLLQVIRYS 392
>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3EFV|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2 With Bound
Nad
pdb|3ETF|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|B Chain B, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|C Chain C, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
pdb|3ETF|D Chain D, Crystal Structure Of A Putative Succinate-Semialdehyde
Dehydrogenase From Salmonella Typhimurium Lt2
Length = 462
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 99/372 (26%), Positives = 146/372 (39%), Gaps = 5/372 (1%)
Query: 41 TIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADXXXXXX 100
+++P TG+ +A + ++++ A+ A F W S A+R +
Sbjct: 11 SVNPATGQTLAAXPWANAQEIEHALSLAASGFKK--WKXTSVAQRAQTLRDIGQALRAHA 68
Query: 101 XXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160
GK A+ ++ +A +YA + Q P+
Sbjct: 69 EEXAQCITREXGKPIKQAR-AEVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPL 127
Query: 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLN 220
GV+ I PWNFP P L AG + ++K A A A + AG P GV
Sbjct: 128 GVILAIXPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYG 187
Query: 221 VVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFD 280
V I + I V+ TGS + A A + LK LELGG P ++ +
Sbjct: 188 WVNANNEGVSQXI-NDPRIAAVTVTGSVRA-GAAIGAQAGAALKKCVLELGGSDPFIVLN 245
Query: 281 DVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340
D D+ A A+ G N G++C A+ R V+EGI F + V A A GDP
Sbjct: 246 DADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEEN 305
Query: 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTEDMLIAKNE 400
GP D + ++ EGA LL T+ +VT D + E
Sbjct: 306 DLGPXARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQE 365
Query: 401 IFGPVMALMKFK 412
+FGPV A+ K
Sbjct: 366 LFGPVAAITVAK 377
>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|B Chain B, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|C Chain C, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
pdb|3LNS|D Chain D, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde
Dehydrogenase, With Bound Nadp+ And Benzoate Adduct
Length = 457
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 130/261 (49%), Gaps = 15/261 (5%)
Query: 152 QGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211
+ Y ++EP GV I P+N+P + + A+ G T I+KP+E TP + +
Sbjct: 123 ECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAE 182
Query: 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271
A P+ V V+ G G + + S + D + FTGS +VG+ VMQAAA +L PV LELG
Sbjct: 183 AFAPEYV-AVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELG 238
Query: 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331
GK PL++ D D++ + + G N G+ +A +YV + D ++LVE+ K +
Sbjct: 239 GKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL 298
Query: 332 VGDPFDPAVRQ-GPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNV 390
P + G V ++Q R++S +E +G L+ T+ V
Sbjct: 299 ------PEINSTGKLVTERQVQRLVSLLE--ATQGQVLVGSQADVSKRALSA--TVVDGV 348
Query: 391 TEDMLIAKNEIFGPVMALMKF 411
+ + E+FGP++ +++F
Sbjct: 349 EWNDPLMSEELFGPILPVLEF 369
>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
pdb|1AD3|B Chain B, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide-
Adenine-Dinucleotide
Length = 452
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 121/257 (47%), Gaps = 13/257 (5%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y EP+GVV I WN+P + + A+AAG +I+KP+E + +A A L
Sbjct: 98 YIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIP-QY 156
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
+ + VV G P + D + +TGST VG+ VM AAA +L PV+LELGGK
Sbjct: 157 MDQNLYLVVKGGVPETTELLKERFD--HIMYTGSTAVGKIVM-AAAAKHLTPVTLELGGK 213
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
SP + D D++ A G N G+ CVA + I ++ +KL + K + G
Sbjct: 214 SPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YG 272
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGK-REGATLLTXXXXXXXXXXXXEPTIFTNVTE 392
+ + G ++ + F R+ I++ K G T PTI +V
Sbjct: 273 EDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTW-------DQSSRYIAPTILVDVDP 325
Query: 393 DMLIAKNEIFGPVMALM 409
+ + EIFGPVM ++
Sbjct: 326 QSPVMQEEIFGPVMPIV 342
>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZA|B Chain B, Crystal Structure Of Human Aldh3a1 - Apo Form
pdb|3SZB|A Chain A, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
pdb|3SZB|B Chain B, Crystal Structure Of Human Aldh3a1 Modified With The
Beta-Elimination Product Of Aldi-1; 1-Phenyl-
2-Propen-1-One
Length = 469
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 154 YTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG 213
Y EP+GVV I WN+P + + A+AAG +++KP+E + +A A +
Sbjct: 115 YIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQYL 174
Query: 214 VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGK 273
D + V+ G P + D + +TGST VG+ +M AAA +L PV+LELGGK
Sbjct: 175 DKD-LYPVINGGVPETTELLKERFD--HILYTGSTGVGKIIMTAAA-KHLTPVTLELGGK 230
Query: 274 SPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333
SP + + D++ A G N G+ CVA + I ++ +KL + K + G
Sbjct: 231 SPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YG 289
Query: 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTXXXXXXXXXXXXEPTIFTNVTED 393
+ + G + + F R++ IE K + PTI T+V
Sbjct: 290 EDAKKSRDYGRIISARHFQRVMGLIEGQK------VAYGGTGDAATRYIAPTILTDVDPQ 343
Query: 394 MLIAKNEIFGPVMALM 409
+ + EIFGPV+ ++
Sbjct: 344 SPVMQEEIFGPVLPIV 359
>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9J|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Sulfate Ion
pdb|3V9K|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9K|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With The Product Glutamate
pdb|3V9L|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|3V9L|B Chain B, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate
Dehydrogenase Complexed With Nad+
pdb|4E3X|A Chain A, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
pdb|4E3X|B Chain B, Crystal Structure Of Mus Musculus
1-Pyrroline-5-Carboxylate Dehydrogenase Cryoprotected In
Proline
Length = 563
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 161/379 (42%), Gaps = 28/379 (7%)
Query: 50 IARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXXXXX 105
+A+ DK ++ A+ AA R+ +D P A+R + LK AD
Sbjct: 91 VAKFCYADKALLNRAIDAALAARKEWDLKPM-----ADRAQVFLKAADMLSGPRRAEVLA 145
Query: 106 XXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIGVVG 164
GK A++ + R+ A A ++ GE + + + R G V
Sbjct: 146 KTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVA 205
Query: 165 HIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPG 224
I P+NF + +PAL G ++ KP++ L + + + AG+P ++ VP
Sbjct: 206 AISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPA 264
Query: 225 FGPTAGAAIASHMDIDKVSFTGST----DVGRQVMQAAATSNLKP-VSLELGGKSPLLIF 279
GPT G + S + ++FTGS + RQV Q P ++ E GGK+ +
Sbjct: 265 DGPTFGDTVTSSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVH 324
Query: 280 DDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP---- 335
DV++ L G+ C A SR+YV + ++ + + +L+E+ VGDP
Sbjct: 325 SSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDF 384
Query: 336 --FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTNVTE 392
F AV +D K F RI ++EH + + ++L EP I +
Sbjct: 385 GTFFSAV-----IDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDP 439
Query: 393 DMLIAKNEIFGPVMALMKF 411
I K EIFGPV+ + +
Sbjct: 440 QEPIMKEEIFGPVLTVYVY 458
>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
pdb|3V9G|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase
Length = 566
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 28/382 (7%)
Query: 47 GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXX 102
G +A+ DK ++ A++AA R+ +D P A+R I LK AD
Sbjct: 91 GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 103 XXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
GK A++ + R+ A A ++ G+ + + + R G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP- 335
+ DV + L G+ C A SR+YV ++ + + +L+E+ VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPA 384
Query: 336 -----FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTN 389
F AV +D K F RI ++EH + + T+L EP I +
Sbjct: 385 EDFGTFFSAV-----IDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVES 439
Query: 390 VTEDMLIAKNEIFGPVMALMKF 411
I K EIFGPV+++ +
Sbjct: 440 KDPQEPIMKEEIFGPVLSVYVY 461
>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
pdb|3V9H|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352a
Length = 566
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 160/382 (41%), Gaps = 28/382 (7%)
Query: 47 GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXX 102
G +A+ DK ++ A++AA R+ +D P A+R I LK AD
Sbjct: 91 GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 103 XXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
GK A++ + R+ A A ++ G+ + + + R G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP- 335
+ DV + L G+ C A +R+YV ++ + + +L+E+ VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPA 384
Query: 336 -----FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTN 389
F AV +D K F RI ++EH + + T+L EP I +
Sbjct: 385 EDFGTFFSAV-----IDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVES 439
Query: 390 VTEDMLIAKNEIFGPVMALMKF 411
I K EIFGPV+++ +
Sbjct: 440 KDPQEPIMKEEIFGPVLSVYVY 461
>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|B Chain B, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|C Chain C, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
pdb|3V9I|D Chain D, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate
Dehydrogenase Mutant S352l
Length = 566
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 159/382 (41%), Gaps = 28/382 (7%)
Query: 47 GEAIARIAEGDKEDVDLAVKAA---RQAFDHGPWPRFSGAERRGIMLKFADXXXX-XXXX 102
G +A+ DK ++ A++AA R+ +D P A+R I LK AD
Sbjct: 91 GHKVAKFCYADKSLLNKAIEAALAARKEWDLKPI-----ADRAQIFLKAADMLSGPRRAE 145
Query: 103 XXXXXXXXXGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEV-LKMSRALQGYTLREPIG 161
GK A++ + R+ A A ++ G+ + + + R G
Sbjct: 146 ILAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEG 205
Query: 162 VVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNV 221
V I P+NF + +PAL G ++ KP++ L + + + AG+P ++
Sbjct: 206 FVAAISPFNFTAIGGNLAGAPALM-GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQF 264
Query: 222 VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS-----NLKPVSLELGGKSPL 276
VP GP G + S + ++FTGS + + + A + ++ E GGK+
Sbjct: 265 VPADGPLFGDTVTSSEHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFH 324
Query: 277 LIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP- 335
+ DV + L G+ C A R+YV ++ + + +L+E+ VGDP
Sbjct: 325 FVHRSADVESVVSGTLRSAFEYGGQKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPA 384
Query: 336 -----FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTXXXXXXXXXXXXEPTIFTN 389
F AV +D K F RI ++EH + + T+L EP I +
Sbjct: 385 EDFGTFFSAV-----IDAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVES 439
Query: 390 VTEDMLIAKNEIFGPVMALMKF 411
I K EIFGPV+++ +
Sbjct: 440 KDPQEPIMKEEIFGPVLSVYVY 461
>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y51|B Chain B, Crystal Structure Of E167a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 41/424 (9%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWAKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
D + +Q A N++ SL S +L D A D+ + ++
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAG 353
Query: 358 IEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMALMK 410
I + E ++ + P +F D L+ E+FGPV ++
Sbjct: 354 IAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413
Query: 411 FKIS 414
++++
Sbjct: 414 YRVT 417
>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y53|B Chain B, Crystal Structure Of E257q Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 41/424 (9%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
D + +Q A N++ SL S +L D A D+ + ++
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVQADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAG 353
Query: 358 IEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMALMK 410
I + E ++ + P +F D L+ E+FGPV ++
Sbjct: 354 IAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413
Query: 411 FKIS 414
++++
Sbjct: 414 YRVT 417
>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y52|B Chain B, Crystal Structure Of E496a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 41/424 (9%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
D + +Q A N++ SL S +L D A D+ + ++
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+
Sbjct: 294 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAG 353
Query: 358 IEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMALMK 410
I + E ++ + P +F D L+ E+FGPV ++
Sbjct: 354 IAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413
Query: 411 FKIS 414
++++
Sbjct: 414 YRVT 417
>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
pdb|2VRO|B Chain B, Crystal Structure Of Aldehyde Dehydrogenase From
Burkholderia Xenovorans Lb400
Length = 532
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 174/424 (41%), Gaps = 41/424 (9%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ +G DP TG A+ R++ E +DLA + D G R
Sbjct: 4 ELLKNHVAGQWIAG-TGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 59
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 60 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 118
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 119 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 178
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 179 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 235
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
D + +Q A N++ SL S +L D A D+ + ++
Sbjct: 236 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 291
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357
G+ C A R +V E + + L K VG+P + AVR G V ++Q++ +L+
Sbjct: 292 KSGQKCTAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAG 351
Query: 358 IEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMALMK 410
I + E ++ + P +F D L+ E+FGPV ++
Sbjct: 352 IAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 411
Query: 411 FKIS 414
++++
Sbjct: 412 YRVT 415
>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
pdb|2Y5D|B Chain B, Crystal Structure Of C296a Mutant Of The Box Pathway
Encoded Aldh From Burkholderia Xenovorans Lb400
Length = 534
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 174/424 (41%), Gaps = 41/424 (9%)
Query: 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPR 79
+ K + G+++ + +G DP TG A+ R++ E +DLA + D G R
Sbjct: 6 ELLKNHVAGQWI-AGTGAGITLTDPVTGVALVRVS---SEGLDLARAFSFAREDGGAALR 61
Query: 80 -FSGAERRGIMLKFADXXXXXXXXXXXXXXXXXGKLHSWAKMGDIPGAANTLRYYA--GA 136
+ A+R + G + + + DI G TL YYA GA
Sbjct: 62 ALTYAQRAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGA 120
Query: 137 A-DKIHG------EVLKMSRALQGYTLREPI-GVVGHIIPWNFPTTMFFMKVSPALAAGC 188
+ ++H E L R+ + P GV I +NFP+ + K +PAL +G
Sbjct: 121 SLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFNFPSWGLWEKAAPALLSGV 180
Query: 189 TMIVKPAEQTP-LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGS 247
+IVKPA T L A + +P G L+++ G ++ + D VSFTGS
Sbjct: 181 PVIVKPATATAWLTQRMVADVVDAGILPPGALSIICG---SSAGLLDQIRSFDVVSFTGS 237
Query: 248 TDVGRQV------MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGIL----F 297
D + +Q A N++ SL S +L D A D+ + ++
Sbjct: 238 ADTAATLRAHPAFVQRGARLNVEADSL----NSAILCADATPDTPAFDLFIKEVVREMTV 293
Query: 298 NKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357
G+ A R +V E + + L K VG+P + AVR G V ++Q++ +L+
Sbjct: 294 KSGQKATAIRRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAG 353
Query: 358 IEHGKREG-----ATLLTXXXXXXXXXXXXEPTIFTNVTED--MLIAKNEIFGPVMALMK 410
I + E ++ + P +F D L+ E+FGPV ++
Sbjct: 354 IAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASVAP 413
Query: 411 FKIS 414
++++
Sbjct: 414 YRVT 417
>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|B Chain B, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|C Chain C, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
pdb|3MY7|D Chain D, The Crystal Structure Of The Acdh Domain Of An Alcohol
Dehyd From Vibrio Parahaemolyticus To 2.25a
Length = 452
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 9/184 (4%)
Query: 144 VLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKP----AEQTP 199
+L+ L T+ EP+G++ I+P PT+ K +L +I P T
Sbjct: 88 ILEEDDNLGTXTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTN 147
Query: 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259
A A AG P ++ + A+ H DI + TG G ++AA
Sbjct: 148 DAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALXKHDDIALILATG----GPGXVKAAY 203
Query: 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319
+S KP G P++I + D+ A L F+ G +C + V V + +YDE
Sbjct: 204 SSG-KPAIGVGAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEV 262
Query: 320 EKKL 323
+++
Sbjct: 263 KERF 266
>pdb|1EYY|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EYY|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|A Chain A, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|B Chain B, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|C Chain C, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi.
pdb|1EZ0|D Chain D, Crystal Structure Of The Nadp+ Dependent Aldehyde
Dehydrogenase From Vibrio Harveyi
Length = 510
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 121 GDIPGAANTLRYYAGAADK--IHGEVLKM---SRA-LQGYTLRE------PIGVVGHIIP 168
G+I AN LR +A + H +L +RA L +R P+ V G
Sbjct: 89 GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGA--- 145
Query: 169 WNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLAKLAGVPDGVLNVV 222
NFP + ALAAGC +IVK P ++A K +P + ++
Sbjct: 146 SNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLL 205
Query: 223 PGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSL--ELGGKSPLLIFD 280
G G A+ SH +I V FTGS GR + A +P+ ELG +P IF
Sbjct: 206 QGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN-LAHERPEPIPFYGELGAINPTFIFP 264
Query: 281 DVDVNTA--ADMALLGILFNKGEICVASSRVY 310
A AD + + G+ C V+
Sbjct: 265 SAMRAKADLADQFVASMTMGCGQFCTKPGVVF 296
>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3V4C|B Chain B, Crystal Structure Of A Semialdehyde Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 528
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 68/181 (37%), Gaps = 11/181 (6%)
Query: 156 LREPIGVVGHIIPWNFPTTMFFM--KVSPALAAGCTMIVKPAEQTP----LIALYFAHLA 209
++ P+G V NFP + ALAAGC ++VK P ++A
Sbjct: 166 VQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAI 225
Query: 210 KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ-AAATSNLKPVSL 268
+ GV GV +++ G G A+ H I V FTGS GR + AA P
Sbjct: 226 RKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFG 285
Query: 269 ELGGKSPLLIFDD---VDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLV 324
ELG +P + + T + G+ C V EG D F V
Sbjct: 286 ELGSVNPXFLLPEALKARAETLGQGWAGSLTXGAGQFCTNPGIAVVIEGADADRFTTAAV 345
Query: 325 E 325
E
Sbjct: 346 E 346
>pdb|3K9D|A Chain A, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|B Chain B, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|C Chain C, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
pdb|3K9D|D Chain D, Crystal Structure Of Probable Aldehyde Dehydrogenase From
Listeria Monocytogenes Egd-E
Length = 464
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 71/174 (40%), Gaps = 17/174 (9%)
Query: 159 PIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL----YFAHLAKLAGV 214
P+GVV +IP PT+ K ++ AG +++ P L + A+ AG
Sbjct: 108 PLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGC 167
Query: 215 PDGVLNV--VPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272
P G ++ VP T + H D + TG G +++AA +S + + G
Sbjct: 168 PKGAISCMTVPTIQGT--DQLMKHKDTAVILATG----GSAMVKAAYSSGTPAIGVG-PG 220
Query: 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQ----EGIYDEFEKK 322
P I ++ A L F+ G IC + V V+ E + EF K+
Sbjct: 221 NGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQ 274
>pdb|3CYV|A Chain A, Crystal Structure Of Uroporphyrinogen Decarboxylase From
Shigella Flexineri: New Insights Into Its Catalytic
Mechanism
Length = 354
Score = 32.3 bits (72), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 43/106 (40%), Gaps = 10/106 (9%)
Query: 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGV---LNVVPGFGPTAGAAI 233
FM + C + ++P + PL A + + VPD + L G GP + +
Sbjct: 46 FMSLCKNAELACEVTLQPLRRYPLDAAIL--FSDILTVPDAMGLGLYFEAGEGPRFTSPV 103
Query: 234 ASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIF 279
D+DK+ D VM A T + EL G+ PL+ F
Sbjct: 104 TCKADVDKLPIPDPEDELGYVMNAVRT-----IRHELKGEVPLIGF 144
>pdb|1MZJ|A Chain A, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
pdb|1MZJ|B Chain B, Crystal Structure Of The Priming Beta-Ketosynthase From
The R1128 Polyketide Biosynthetic Pathway
Length = 339
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 10/71 (14%)
Query: 14 FKMPEIKFTKLFINGEFV--DSVSGK--------TFETIDPRTGEAIARIAEGDKEDVDL 63
++PE +F+++ G + VS K T E I+ RTG RIAE D+ +
Sbjct: 4 LRVPERRFSRVLGVGSYRPRREVSNKEVCTWIDSTEEWIETRTGIRSRRIAEPDETIQVM 63
Query: 64 AVKAARQAFDH 74
V A+R+A +H
Sbjct: 64 GVAASRRALEH 74
>pdb|1JJU|A Chain A, Structure Of A Quinohemoprotein Amine Dehydrogenase With A
Unique Redox Cofactor And Highly Unusual Crosslinking
pdb|1PBY|A Chain A, Structure Of The Phenylhydrazine Adduct Of The
Quinohemoprotein Amine Dehydrogenase From Paracoccus
Denitrificans At 1.7 A Resolution
Length = 489
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 251 GRQVMQAAATSNLKPVSLELGG-KSPLLIFDDVD-VNTAADMALLGILFNKGEI 302
G V++ AT PVSLELGG K L+ +D D ++ D+ + I N G I
Sbjct: 321 GVTVLKLTATGTPGPVSLELGGQKVDLVAYDRPDRISIVPDLTIARIGGNGGPI 374
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,404,098
Number of Sequences: 62578
Number of extensions: 452120
Number of successful extensions: 1616
Number of sequences better than 100.0: 97
Number of HSP's better than 100.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 1293
Number of HSP's gapped (non-prelim): 98
length of query: 414
length of database: 14,973,337
effective HSP length: 101
effective length of query: 313
effective length of database: 8,652,959
effective search space: 2708376167
effective search space used: 2708376167
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)