Query 015020
Match_columns 414
No_of_seqs 221 out of 1588
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:15:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015020.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015020hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 2.1E-94 7.1E-99 728.5 44.4 393 19-413 4-400 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 1E-90 3.6E-95 706.9 45.3 407 3-413 14-427 (520)
3 3ifg_A Succinate-semialdehyde 100.0 1.8E-90 6.2E-95 700.5 45.2 390 20-413 11-401 (484)
4 3rh9_A Succinate-semialdehyde 100.0 6.2E-90 2.1E-94 699.0 46.8 391 19-413 9-401 (506)
5 1bxs_A Aldehyde dehydrogenase; 100.0 2.2E-89 7.4E-94 694.9 47.1 409 5-413 1-413 (501)
6 2o2p_A Formyltetrahydrofolate 100.0 2.9E-89 1E-93 695.8 45.7 392 22-413 37-432 (517)
7 3u4j_A NAD-dependent aldehyde 100.0 4.9E-89 1.7E-93 695.8 47.2 391 19-413 20-415 (528)
8 3ek1_A Aldehyde dehydrogenase; 100.0 1.9E-89 6.5E-94 695.2 43.4 387 21-413 32-419 (504)
9 3b4w_A Aldehyde dehydrogenase; 100.0 6E-89 2.1E-93 691.2 46.1 392 20-413 7-400 (495)
10 4f3x_A Putative aldehyde dehyd 100.0 2.7E-89 9.4E-94 693.6 43.5 390 18-413 22-414 (498)
11 1a4s_A ALDH, betaine aldehyde 100.0 1.3E-88 4.4E-93 690.1 47.0 392 17-413 15-413 (503)
12 3k2w_A Betaine-aldehyde dehydr 100.0 5.7E-89 1.9E-93 692.3 42.4 393 17-413 8-405 (497)
13 3iwj_A Putative aminoaldehyde 100.0 1.4E-88 4.8E-93 690.4 45.0 392 20-413 6-406 (503)
14 3i44_A Aldehyde dehydrogenase; 100.0 1.9E-88 6.5E-93 687.3 45.8 391 18-413 22-416 (497)
15 1o04_A Aldehyde dehydrogenase, 100.0 2.8E-88 9.5E-93 686.6 44.3 392 22-413 20-412 (500)
16 3r31_A BADH, betaine aldehyde 100.0 1.8E-88 6.1E-93 690.0 42.0 387 18-413 11-405 (517)
17 3jz4_A Succinate-semialdehyde 100.0 5.9E-88 2E-92 683.2 44.5 390 20-413 8-398 (481)
18 4e4g_A Methylmalonate-semialde 100.0 2.4E-88 8.1E-93 689.7 41.6 390 19-413 24-419 (521)
19 2imp_A Lactaldehyde dehydrogen 100.0 6.9E-88 2.4E-92 682.4 44.6 390 20-413 5-396 (479)
20 1wnd_A Putative betaine aldehy 100.0 6.1E-88 2.1E-92 683.3 43.6 395 13-413 15-412 (495)
21 3qan_A 1-pyrroline-5-carboxyla 100.0 1.1E-87 3.6E-92 687.4 45.4 387 20-413 36-430 (538)
22 2ve5_A BADH, betaine aldehyde 100.0 8.8E-88 3E-92 683.9 44.3 394 17-413 2-400 (490)
23 2d4e_A 5-carboxymethyl-2-hydro 100.0 8.3E-88 2.8E-92 686.0 44.1 388 21-413 26-422 (515)
24 3prl_A NADP-dependent glyceral 100.0 1.5E-87 5E-92 682.1 44.4 384 20-413 10-399 (505)
25 2j6l_A Aldehyde dehydrogenase 100.0 1E-86 3.4E-91 676.3 44.1 399 8-413 9-413 (500)
26 2w8n_A Succinate-semialdehyde 100.0 7.2E-87 2.5E-91 675.3 41.8 385 22-413 13-403 (487)
27 3r64_A NAD dependent benzaldeh 100.0 1.8E-86 6.1E-91 675.7 44.1 387 19-413 10-401 (508)
28 4dng_A Uncharacterized aldehyd 100.0 1.3E-86 4.3E-91 674.6 42.7 387 20-413 5-394 (485)
29 3pqa_A Lactaldehyde dehydrogen 100.0 2.1E-86 7.1E-91 670.7 41.6 376 24-413 2-381 (486)
30 1t90_A MMSDH, probable methylm 100.0 4E-86 1.4E-90 670.2 42.1 388 20-413 4-394 (486)
31 1euh_A NADP dependent non phos 100.0 4.8E-86 1.7E-90 668.3 41.9 382 20-413 3-390 (475)
32 3ros_A NAD-dependent aldehyde 100.0 6.7E-86 2.3E-90 666.6 41.9 371 38-413 5-375 (484)
33 3ty7_A Putative aldehyde dehyd 100.0 4.1E-86 1.4E-90 669.7 40.4 388 19-413 5-395 (478)
34 1uzb_A 1-pyrroline-5-carboxyla 100.0 6.9E-86 2.4E-90 672.6 41.8 386 21-413 37-430 (516)
35 1uxt_A Glyceraldehyde-3-phosph 100.0 1.1E-85 3.7E-90 668.3 40.3 382 21-413 18-408 (501)
36 3ju8_A Succinylglutamic semial 100.0 5.5E-85 1.9E-89 662.5 44.9 384 23-413 7-393 (490)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 1.2E-84 4E-89 666.3 41.6 388 20-413 62-460 (563)
38 3etf_A Putative succinate-semi 100.0 4.4E-83 1.5E-87 645.3 41.8 373 36-413 6-378 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 4.5E-82 1.5E-86 680.4 42.5 388 20-413 530-924 (1026)
40 2y53_A Aldehyde dehydrogenase 100.0 8.8E-82 3E-86 645.3 37.2 383 21-412 7-415 (534)
41 4h7n_A Aldehyde dehydrogenase; 100.0 1.2E-81 4.1E-86 636.0 36.7 372 34-413 3-377 (474)
42 3lns_A Benzaldehyde dehydrogen 100.0 8.8E-78 3E-82 605.1 39.6 362 37-413 6-371 (457)
43 3v4c_A Aldehyde dehydrogenase 100.0 6.1E-78 2.1E-82 616.1 36.0 374 19-413 27-425 (528)
44 1ez0_A ALDH, aldehyde dehydrog 100.0 1.7E-76 5.7E-81 603.1 35.1 363 33-413 3-390 (510)
45 3sza_A Aldehyde dehydrogenase, 100.0 9.8E-76 3.4E-80 590.7 39.6 345 56-413 15-363 (469)
46 3haz_A Proline dehydrogenase; 100.0 1.1E-73 3.9E-78 613.9 37.6 352 53-413 544-899 (1001)
47 3k9d_A LMO1179 protein, aldehy 100.0 3.3E-66 1.1E-70 521.9 22.8 336 52-413 5-354 (464)
48 3my7_A Alcohol dehydrogenase/a 100.0 3.9E-66 1.3E-70 519.7 21.6 334 53-413 1-349 (452)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 8.7E-66 3E-70 517.1 19.5 322 39-413 9-348 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 4.6E-64 1.6E-68 505.2 13.4 313 60-413 15-353 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 7.7E-61 2.6E-65 479.8 24.8 306 58-413 25-352 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 7.5E-61 2.6E-65 477.7 21.7 305 57-413 12-335 (427)
53 4gic_A HDH, histidinol dehydro 90.6 13 0.00043 35.8 22.2 239 76-330 26-298 (423)
54 3v4g_A Arginine repressor; vib 67.5 25 0.00086 29.6 8.4 41 183-226 113-153 (180)
55 3v42_A Folliculin; tumor suppr 54.2 13 0.00044 32.6 4.4 69 177-253 21-89 (226)
56 3fxd_A Protein ICMQ; helix bun 54.0 37 0.0013 22.5 5.4 47 56-108 5-51 (57)
57 1b93_A Protein (methylglyoxal 49.6 28 0.00095 28.5 5.5 114 161-300 12-135 (152)
58 3lap_A Arginine repressor; arg 48.7 1.2E+02 0.0039 25.2 10.8 42 181-226 106-147 (170)
59 1kae_A HDH, histidinol dehydro 47.1 2E+02 0.0069 27.6 21.4 191 123-330 88-292 (434)
60 1vmd_A MGS, methylglyoxal synt 43.8 20 0.00067 30.2 3.7 120 155-300 21-151 (178)
61 2yvq_A Carbamoyl-phosphate syn 41.0 22 0.00074 28.7 3.5 63 206-270 60-132 (143)
62 2xw6_A MGS, methylglyoxal synt 39.3 7.7 0.00026 31.1 0.5 87 172-269 16-111 (134)
63 1b4b_A Arginine repressor; cor 32.8 91 0.0031 21.6 5.3 56 186-258 12-67 (71)
64 2ioj_A Hypothetical protein AF 31.9 31 0.0011 27.3 3.1 43 217-259 53-95 (139)
65 2zfz_A Arginine repressor; DNA 31.8 97 0.0033 21.9 5.4 37 186-226 20-56 (79)
66 1xxa_A ARGR, arginine represso 30.7 68 0.0023 22.8 4.4 38 186-226 14-51 (78)
67 2v9v_A Selenocysteine-specific 30.1 59 0.002 25.3 4.5 86 288-373 34-125 (135)
68 1use_A VAsp, vasodilator-stimu 29.7 69 0.0023 20.2 3.6 28 85-112 13-40 (45)
69 3pzy_A MOG; ssgcid, seattle st 29.4 58 0.002 26.7 4.4 52 200-252 27-80 (164)
70 1y5e_A Molybdenum cofactor bio 29.1 36 0.0012 28.1 3.1 53 199-251 30-85 (169)
71 3iwt_A 178AA long hypothetical 28.7 68 0.0023 26.5 4.8 53 199-251 39-94 (178)
72 2p5m_A Arginine repressor; alp 28.5 88 0.003 22.4 4.8 56 186-258 24-79 (83)
73 3rfq_A Pterin-4-alpha-carbinol 24.4 62 0.0021 27.3 3.7 54 199-252 48-103 (185)
74 2l82_A Designed protein OR32; 24.3 88 0.003 23.7 4.1 104 241-370 5-108 (162)
75 3u3x_A Oxidoreductase; structu 20.7 4.9E+02 0.017 23.8 9.9 87 231-334 81-169 (361)
76 2ixa_A Alpha-N-acetylgalactosa 20.0 5.6E+02 0.019 24.2 11.0 148 163-334 23-171 (444)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.1e-94 Score=728.47 Aligned_cols=393 Identities=42% Similarity=0.730 Sum_probs=375.8
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++||++|++||+ .|+++|..+|.++|++++++|++
T Consensus 4 ~~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~ 81 (490)
T 2wme_A 4 FEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRE 81 (490)
T ss_dssp SCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHH
Confidence 4456899999999988889999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
|+++|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+...+...+++++|+|||++|+|||||+...++
T Consensus 82 ~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~ 161 (490)
T 2wme_A 82 RNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALW 161 (490)
T ss_dssp THHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhh
Confidence 99999999999999999999864699999999999999988877777666677789999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 162 ~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~ 241 (490)
T 2wme_A 162 KSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASA 241 (490)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred hHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999998766
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++
T Consensus 242 a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~ 321 (490)
T 2wme_A 242 SSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDE 321 (490)
T ss_dssp HHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred hccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccc
Confidence 54789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|||+++.+++++.++|++++++||++++||.+.. .+|+|++||||.+++++|++++||+||||++|++|++
T Consensus 322 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (490)
T 2wme_A 322 NTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDD 400 (490)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESC
T ss_pred cCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCC
Confidence 99999999999999999999999999999999998643 3689999999999999999999999999999999986
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=1e-90 Score=706.89 Aligned_cols=407 Identities=38% Similarity=0.655 Sum_probs=376.6
Q ss_pred CCCCCcccccccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCC
Q 015020 3 GSLSNGSCKSLFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRF 80 (414)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~ 80 (414)
||++...-+.-|........++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.+
T Consensus 14 ~~~~~~~~~~~m~~~~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~ 91 (520)
T 3ed6_A 14 GTENLYFQSNAMELLKHLSQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQE 91 (520)
T ss_dssp -----CHHHHHHHHGGGSCCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTS
T ss_pred CCCCccccccccccccccCCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccC
Confidence 4444433333333333345678999999988778899999999999999999999999999999999999 8 89999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecC
Q 015020 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREP 159 (414)
Q Consensus 81 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P 159 (414)
+..+|.++|++++++|++++++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+...++.++|
T Consensus 92 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P 170 (520)
T 3ed6_A 92 TAETRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEP 170 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccC
Confidence 9999999999999999999999999999999999999996 999999999999999887766554433 45677899999
Q ss_pred CceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCc
Q 015020 160 IGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDI 239 (414)
Q Consensus 160 ~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v 239 (414)
+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+|
T Consensus 171 ~GVV~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~v 250 (520)
T 3ed6_A 171 VGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEV 250 (520)
T ss_dssp CCEEEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTC
T ss_pred ccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999877899999999999
Q ss_pred CEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHH
Q 015020 240 DKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEF 319 (414)
Q Consensus 240 ~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f 319 (414)
+.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|
T Consensus 251 d~V~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f 329 (520)
T 3ed6_A 251 DLVSFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKF 329 (520)
T ss_dssp SEEEEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHH
T ss_pred CEEEEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHH
Confidence 99999999999999999999 88999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCc
Q 015020 320 EKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDML 395 (414)
Q Consensus 320 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~ 395 (414)
+++|+++++++++|+|.|+++++||++++.+++++.++|++++++||++++||.... ..|+|++||||.+++++|+
T Consensus 330 ~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~ 409 (520)
T 3ed6_A 330 EQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMR 409 (520)
T ss_dssp HHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSH
T ss_pred HHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCc
Confidence 999999999999999999999999999999999999999999999999999998642 4699999999999999999
Q ss_pred ccccccccceeeEEEEec
Q 015020 396 IAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 396 i~~~E~fgPv~~v~~~~~ 413 (414)
+++||+||||++|++|++
T Consensus 410 i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 410 IVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp HHHSCCCSSEEEEEEESS
T ss_pred cccCceeCcEEEEEEeCC
Confidence 999999999999999986
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=1.8e-90 Score=700.55 Aligned_cols=390 Identities=37% Similarity=0.621 Sum_probs=372.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 11 ~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 88 (484)
T 3ifg_A 11 LRHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIAN 88 (484)
T ss_dssp SCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 89 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 167 (484)
T 3ifg_A 89 SDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIAR 167 (484)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHH
Confidence 999999999999999999986 999999999999998877665544432 456788999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|++||+|+.|+||||+.+|+.|++.+
T Consensus 168 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~a 247 (484)
T 3ifg_A 168 KVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS 247 (484)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHT
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 248 a-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 326 (484)
T 3ifg_A 248 A-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTES 326 (484)
T ss_dssp G-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTST
T ss_pred h-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 8 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++|||+++.+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 327 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (484)
T 3ifg_A 327 GATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFAS 401 (484)
T ss_dssp TCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECC
T ss_pred CCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCC
Confidence 999999999999999999999999999999999987544799999999999999999999999999999999986
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=6.2e-90 Score=699.03 Aligned_cols=391 Identities=32% Similarity=0.583 Sum_probs=373.7
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999887788999999999999999999999999999999999999 99999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeee-cCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLR-EPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+...+...++.+ +|+|||++|+|||||+...+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 9999999999999999999995 999999999999999988766655433456678888 99999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 246 aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 98 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++||++++++++++.++|++++++||++++||...+. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRT 401 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCC
Confidence 9999999999999999999999999999999999986433 799999999999999999999999999999999986
No 5
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=2.2e-89 Score=694.86 Aligned_cols=409 Identities=54% Similarity=0.916 Sum_probs=372.6
Q ss_pred CCCcccccccCCCCc---cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCC
Q 015020 5 LSNGSCKSLFKMPEI---KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRF 80 (414)
Q Consensus 5 ~~~~~~~~~~~~~~~---~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~ 80 (414)
||+++|++...-... ...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++| .|+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~ 80 (501)
T 1bxs_A 1 MSSSAMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTM 80 (501)
T ss_dssp -------CCCCCCSSCCCCCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHS
T ss_pred CCcccCCcccCccccccccccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhC
Confidence 345555555432222 22468999999987667899999999999999999999999999999999999732 49999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCC
Q 015020 81 SGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPI 160 (414)
Q Consensus 81 ~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 160 (414)
+..+|.++|+++++.|++++++|++++++|+|||+.++...|+..+++.+++++++++++.+...+...+...++.++|+
T Consensus 81 ~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~ 160 (501)
T 1bxs_A 81 DASERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPV 160 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCC
Confidence 99999999999999999999999999999999999987545999999999999999887766544433445678999999
Q ss_pred ceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcC
Q 015020 161 GVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDID 240 (414)
Q Consensus 161 Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~ 240 (414)
|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||
T Consensus 161 GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~ 240 (501)
T 1bxs_A 161 GVCGQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVD 240 (501)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCS
T ss_pred ceEEEECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999997778999999999999
Q ss_pred EEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHH
Q 015020 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320 (414)
Q Consensus 241 ~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~ 320 (414)
.|+||||+.+|+.|++.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus 241 ~I~FTGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~ 320 (501)
T 1bxs_A 241 KVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFV 320 (501)
T ss_dssp EEEEESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHH
Confidence 99999999999999998875688999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccc
Q 015020 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNE 400 (414)
Q Consensus 321 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E 400 (414)
++|+++++++++|||.++++++||++++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||
T Consensus 321 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE 400 (501)
T 1bxs_A 321 RRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEE 400 (501)
T ss_dssp HHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSC
T ss_pred HHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcc
Confidence 99999999999999999999999999999999999999999999999999997643469999999999999999999999
Q ss_pred cccceeeEEEEec
Q 015020 401 IFGPVMALMKFKI 413 (414)
Q Consensus 401 ~fgPv~~v~~~~~ 413 (414)
+||||++|++|++
T Consensus 401 iFGPVl~v~~~~~ 413 (501)
T 1bxs_A 401 IFGPVQQIMKFKS 413 (501)
T ss_dssp CCSSEEEEEEECC
T ss_pred cccceEEEEEeCC
Confidence 9999999999986
No 6
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=2.9e-89 Score=695.78 Aligned_cols=392 Identities=43% Similarity=0.795 Sum_probs=368.6
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.+|..+|.++|++++++|+++++
T Consensus 37 ~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~ 116 (517)
T 2o2p_A 37 YQLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQE 116 (517)
T ss_dssp CSEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CCeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHH
Confidence 46899999998656778999999999999999999999999999999999974459999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec----cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM----SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+|++++++|+|||+.+++..|+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 117 ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 196 (517)
T 2o2p_A 117 ELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLS 196 (517)
T ss_dssp HHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHH
Confidence 9999999999999999973499999999999999988766654443 122356899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 197 ~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~ 276 (517)
T 2o2p_A 197 WKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKS 276 (517)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877889999999999999999999999999998
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||++
T Consensus 277 aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 277 CALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred hHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 87457899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|||+++.+++++.++|++++++||++++||......|+|++||||.+++++|++++||+||||++|++|++
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 432 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFAD 432 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECT
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCC
Confidence 9999999999999999999999999999999999986433699999999999999999999999999999999987
No 7
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.9e-89 Score=695.76 Aligned_cols=391 Identities=41% Similarity=0.720 Sum_probs=373.2
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhc--ccCCCCCCCHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAF--DHGPWPRFSGAERRGIMLKFADL 95 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~--~~~~w~~~~~~~R~~~L~~~a~~ 95 (414)
+...++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|+++++.
T Consensus 20 ~~~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~ 97 (528)
T 3u4j_A 20 KSRYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAG--PWPRMSGAERSRLMFKVADL 97 (528)
T ss_dssp CCBCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTS--SGGGSCHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHH
Confidence 3457899999999887788999999999 99999999999999999999999999 7 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHH
Q 015020 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTT 174 (414)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~ 174 (414)
|++++++|++++++|+|||+.+++. |+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+.
T Consensus 98 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 176 (528)
T 3u4j_A 98 ILARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFI 176 (528)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHH
Confidence 9999999999999999999999975 999999999999999987766555433 45668899999999999999999999
Q ss_pred hhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHH
Q 015020 175 MFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQV 254 (414)
Q Consensus 175 ~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i 254 (414)
..++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|
T Consensus 177 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 256 (528)
T 3u4j_A 177 IASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKL 256 (528)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877899999999999999999999999999
Q ss_pred HHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCC
Q 015020 255 MQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGD 334 (414)
Q Consensus 255 ~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~ 334 (414)
++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+
T Consensus 257 ~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 335 (528)
T 3u4j_A 257 GEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGD 335 (528)
T ss_dssp HHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCC
Confidence 99998 89999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCC-CCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 335 PFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGK-KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 335 p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|.++++++||++++++++++.++|++++++||++++||..... .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 336 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 415 (528)
T 3u4j_A 336 PLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKT 415 (528)
T ss_dssp TTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCC
Confidence 9999999999999999999999999999999999999986533 799999999999999999999999999999999986
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.9e-89 Score=695.15 Aligned_cols=387 Identities=39% Similarity=0.691 Sum_probs=370.4
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999877788999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.+++. |+..+++.+++|+.++++..+...+.. .+...++.++|+|||++|+|||||+...+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999987 999999999999999887665544432 3466889999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|++||+|+.|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988889999999999999999999999999999998
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.+++
T Consensus 269 -~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 -PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp -GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred -hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++.+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 419 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDT 419 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECC
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCC
Confidence 99999999999999999999999999999999976 3689999999999999999999999999999999986
No 9
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6e-89 Score=691.24 Aligned_cols=392 Identities=39% Similarity=0.681 Sum_probs=370.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||++|.|+.+|..+|.++|+++++.|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987667899999999999999999999999999999999999744699999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
+++|++++++|+|||+.+++..|+..+++.+++++++++++.+...+...+...++.++|+|||++|+|||||+...+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999997349999999999999988887666544333346789999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||++|.|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8789999999999999999999999999999998
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 246 -~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 -EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp -HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred -hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++||++++++++++.++|++++++|+++++||.... ..|+|++||||.+++++|++++||+||||++|++|++
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 400 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDT 400 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCC
Confidence 9999999999999999999999999999999997643 2589999999999999999999999999999999986
No 10
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=2.7e-89 Score=693.64 Aligned_cols=390 Identities=34% Similarity=0.606 Sum_probs=371.1
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
.+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 22 ~~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 98 (498)
T 4f3x_A 22 SMMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIE 98 (498)
T ss_dssp -CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred hccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHH
Confidence 4456789999999987666 999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhh-hhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHh
Q 015020 98 EHAEVLAVLEALDAGKLHSWA-KMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a-~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
+++++|++++++|+|||+.++ + .|+..+++.+++++++++++.+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 99 ~~~~ela~~~~~e~Gk~~~ea~~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 177 (498)
T 4f3x_A 99 KEADEFAALEALNCGKPINAVKN-DELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMM 177 (498)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-THHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHH
T ss_pred HhHHHHHHHHHHHhCCCHHHHhH-HHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHH
Confidence 999999999999999999999 6 499999999999999988766554432 2456788999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|+
T Consensus 178 ~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 256 (498)
T 4f3x_A 178 MAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVL 256 (498)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHH
Confidence 9999999999999999999999999999999999999 999999999998888999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 257 ~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p 335 (498)
T 4f3x_A 257 AAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLD 335 (498)
T ss_dssp HHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCS
T ss_pred HHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCC-EEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGA-TLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++++++||++++.+++++.++|++++++|+ ++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 336 ~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 414 (498)
T 4f3x_A 336 DDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTG 414 (498)
T ss_dssp SGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECT
T ss_pred ccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCC
Confidence 9999999999999999999999999999999 99999986555799999999999999999999999999999999986
No 11
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.3e-88 Score=690.06 Aligned_cols=392 Identities=37% Similarity=0.678 Sum_probs=370.7
Q ss_pred CCccccceeEcCeEeeCCCCCe-EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHH
Q 015020 17 PEIKFTKLFINGEFVDSVSGKT-FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADL 95 (414)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~-~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~ 95 (414)
......++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.
T Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~ 92 (503)
T 1a4s_A 15 VVVTDDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARI 92 (503)
T ss_dssp CCCCSCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHH
Confidence 3345577999999998766778 99999999999999999999999999999999999 89999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHh
Q 015020 96 IEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 96 l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
|++++++|++++++|+|||+.+++. |+..+++.++++++++++..+...+...+...++.++|+|||++|+|||||+..
T Consensus 93 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 171 (503)
T 1a4s_A 93 IRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMI 171 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHH
Confidence 9999999999999999999999986 999999999999999887765544433344678999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+ ++++.|+.||+++.|+||||+.+|+.|+
T Consensus 172 ~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~ 250 (503)
T 1a4s_A 172 AAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVM 250 (503)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 251 ~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p 329 (503)
T 1a4s_A 251 EMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDP 329 (503)
T ss_dssp HHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCC
Confidence 9999 899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc--C----CCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI--G----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
.++++++||++++.+++++.++|++++++|+++++||... . ..|+|++||||.+++++|++++||+||||++|+
T Consensus 330 ~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 409 (503)
T 1a4s_A 330 LLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVL 409 (503)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred cccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEE
Confidence 9999999999999999999999999999999999999764 1 358999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 410 ~~~~ 413 (503)
T 1a4s_A 410 PFDT 413 (503)
T ss_dssp EECC
T ss_pred ecCC
Confidence 9986
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=5.7e-89 Score=692.31 Aligned_cols=393 Identities=35% Similarity=0.626 Sum_probs=371.8
Q ss_pred CCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 015020 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (414)
.++...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 345667899999999887788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
++++++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+. ..+...++.++|+|||++|+|||||+..
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 999999999999999999999986 99999999999999988776655443 2456788999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998778999999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 245 ~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 9998 889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc--cCC--CCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP--IGK--KGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
.++++++||++++++++++.++|++++++|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 222 6899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 404 ~~ 405 (497)
T 3k2w_A 404 SS 405 (497)
T ss_dssp SC
T ss_pred CC
Confidence 86
No 13
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.4e-88 Score=690.39 Aligned_cols=392 Identities=44% Similarity=0.748 Sum_probs=370.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC---CCCCCCHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG---PWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~---~w~~~~~~~R~~~L~~~a~~l 96 (414)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||.++ .|+.++..+|.++|+++++.|
T Consensus 6 ~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~l 85 (503)
T 3iwj_A 6 PTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAKV 85 (503)
T ss_dssp CCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHHH
T ss_pred CCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHHH
Confidence 45679999999988778899999999999999999999999999999999999732 699999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCcee-ec---cCCccceeeecCCceEEEEcCCchh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM---SRALQGYTLREPIGVVGHIIPWNFP 172 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P~Gvv~~i~p~n~P 172 (414)
++++++|++++++|+|||+.+++. |+..+++.+++++.+++++.+... +. ..+...++.++|+|||++|+|||||
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P 164 (503)
T 3iwj_A 86 TEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNYP 164 (503)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSSH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCchH
Confidence 999999999999999999999986 999999999999999877654321 11 1345688999999999999999999
Q ss_pred HHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHH
Q 015020 173 TTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGR 252 (414)
Q Consensus 173 ~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~ 252 (414)
+...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+++.|+||||+.+|+
T Consensus 165 ~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~ 244 (503)
T 3iwj_A 165 MLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATGS 244 (503)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHHH
T ss_pred HHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHHH
Confidence 99999999999999999999999999999999999999999999999999998878999999999999999999999999
Q ss_pred HHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 253 QVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 253 ~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
.|++.++ .++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 245 ~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (503)
T 3iwj_A 245 KIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKI 323 (503)
T ss_dssp HHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCCB
T ss_pred HHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhccC
Confidence 9999998 789999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEE
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMK 410 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~ 410 (414)
|+|+++++++|||+++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 403 (503)
T 3iwj_A 324 SDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVKT 403 (503)
T ss_dssp SCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEE
T ss_pred CCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEEE
Confidence 99999999999999999999999999999999999999998643 4799999999999999999999999999999999
Q ss_pred Eec
Q 015020 411 FKI 413 (414)
Q Consensus 411 ~~~ 413 (414)
|++
T Consensus 404 ~~~ 406 (503)
T 3iwj_A 404 FST 406 (503)
T ss_dssp ESS
T ss_pred eCC
Confidence 985
No 14
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.9e-88 Score=687.34 Aligned_cols=391 Identities=36% Similarity=0.597 Sum_probs=367.0
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+
T Consensus 22 m~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (497)
T 3i44_A 22 MLNKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYE 99 (497)
T ss_dssp CEEECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHH
Confidence 33567899999999887788999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceee-ecCCceEEEEcCCchhHHhh
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTL-REPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv~~i~p~n~P~~~~ 176 (414)
+++++|++++++|+|||+.+++..|+..+++.++++++........... ..+...++. ++|+|||++|+|||||+...
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 178 (497)
T 3i44_A 100 KRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGVVGLITPWNWPMNQV 178 (497)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceEEEEECCCcchHHHH
Confidence 9999999999999999999998349999999999999877654322211 124457788 99999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+||.|+||||+.+|+.|++
T Consensus 179 ~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~ 258 (497)
T 3i44_A 179 TLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISK 258 (497)
T ss_dssp HHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
.++ +++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||.
T Consensus 259 ~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~ 336 (497)
T 3i44_A 259 NAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGH 336 (497)
T ss_dssp HHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTT
T ss_pred HHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCC
Confidence 999 89999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCc-ccC--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGK-PIG--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++||++++.+++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 337 ~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 416 (497)
T 3i44_A 337 QTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNT 416 (497)
T ss_dssp SCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCC
Confidence 9999999999999999999999999999999999994 322 2699999999999999999999999999999999986
No 15
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=2.8e-88 Score=686.57 Aligned_cols=392 Identities=55% Similarity=0.894 Sum_probs=368.8
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccC-CCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHG-PWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+++ .|+.++..+|.++|+++++.|++|+
T Consensus 20 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (500)
T 1o04_A 20 NQIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDR 99 (500)
T ss_dssp CSEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999987667899999999999999999999999999999999999621 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
++|++++++|+|||+.++...|+..+++.++++++++++..+...+...+...++.++|+|||++|+|||||+...++++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 179 (500)
T 1o04_A 100 TYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKL 179 (500)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHH
Confidence 99999999999999998754599999999999999888776554443334557899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||.|+||||+.+|+.|++.++.
T Consensus 180 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~ 259 (500)
T 1o04_A 180 GPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGS 259 (500)
T ss_dssp HHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999777899999999999999999999999999998875
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||.++++
T Consensus 260 ~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 339 (500)
T 1o04_A 260 SNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKT 339 (500)
T ss_dssp TTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTC
T ss_pred hcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|||+++.+++++.++|++++++|+++++||......|+|++||||.+++++|++++||+||||++|++|++
T Consensus 340 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 412 (500)
T 1o04_A 340 EQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKT 412 (500)
T ss_dssp SBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred ccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCC
Confidence 9999999999999999999999999999999976434699999999999999999999999999999999986
No 16
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.8e-88 Score=690.03 Aligned_cols=387 Identities=39% Similarity=0.681 Sum_probs=369.0
Q ss_pred CccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 18 EIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 18 ~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
++...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 11 ~~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 88 (517)
T 3r31_A 11 AQPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMR 88 (517)
T ss_dssp TCCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHH
T ss_pred cccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHH
Confidence 34567899999999887888999999999999999999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhh----hcCceeeccCCccceeeecCCceEEEEcCCchhH
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADK----IHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++++|++++++|+|||+.++ |+..+++.+++++.++++ ..+...+...+. .++.++|+|||++|+|||||+
T Consensus 89 ~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~ 164 (517)
T 3r31_A 89 ERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQ 164 (517)
T ss_dssp HTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHH
T ss_pred HHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchH
Confidence 999999999999999999998 899999999999999887 666655543445 899999999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+| +.++++.|++||+||.|+||||+.+|+.
T Consensus 165 ~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 243 (517)
T 3r31_A 165 QIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRK 243 (517)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 7789999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 244 i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 322 (517)
T 3r31_A 244 VAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILG 322 (517)
T ss_dssp HHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred HHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCC
Confidence 999998 7899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcc-cC---CCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKP-IG---KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~~---~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
+|.++++++||++++.+++++.++|++++++|+++++|| . .+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 401 (517)
T 3r31_A 323 DPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVL 401 (517)
T ss_dssp CTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEE
T ss_pred CCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEE
Confidence 999999999999999999999999999999999999999 4 21 369999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 402 ~~~~ 405 (517)
T 3r31_A 402 DFDD 405 (517)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9986
No 17
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=5.9e-88 Score=683.24 Aligned_cols=390 Identities=37% Similarity=0.665 Sum_probs=371.4
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 8 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 85 (481)
T 3jz4_A 8 FRQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEH 85 (481)
T ss_dssp CCCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 345689999999887888999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||..+++. |+..+++.+++++....+..+...+. ..+...++.++|+|||++|+|||||+...++
T Consensus 86 ~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 164 (481)
T 3jz4_A 86 QDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITR 164 (481)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHH
Confidence 999999999999999999986 99999999999999887665554442 2456678999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||+|+.|+||||+.+|+.|++.+
T Consensus 165 ~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~a 244 (481)
T 3jz4_A 165 KAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC 244 (481)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 245 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 323 (481)
T 3jz4_A 245 A-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDN 323 (481)
T ss_dssp T-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTST
T ss_pred h-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccC
Confidence 8 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 324 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 398 (481)
T 3jz4_A 324 GVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKD 398 (481)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECC
T ss_pred cCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECC
Confidence 999999999999999999999999999999999986445689999999999999999999999999999999986
No 18
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.4e-88 Score=689.70 Aligned_cols=390 Identities=32% Similarity=0.461 Sum_probs=369.1
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
|...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4667899999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++++.+.+...+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999986 99999999999998777665544332 245568899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|+ .+.+..|+.||+||.|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999995 4677999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecc-hHHHHHHHHHHHHhccccCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|+++++++++|+|.
T Consensus 260 aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 98 789999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc----CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI----GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
++++++||++++.+++++.++|++++++||++++||... ...|+|++||||.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999752 2469999999999999999999999999999999997
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 419 ~ 419 (521)
T 4e4g_A 419 N 419 (521)
T ss_dssp S
T ss_pred C
Confidence 5
No 19
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=6.9e-88 Score=682.42 Aligned_cols=390 Identities=33% Similarity=0.603 Sum_probs=369.1
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (479)
T 2imp_A 5 VQHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRER 82 (479)
T ss_dssp EECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999876678999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.++++++++++..+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 161 (479)
T 2imp_A 83 ASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIAR 161 (479)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999988877665543322 344678999999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++.+
T Consensus 162 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~a 241 (479)
T 2imp_A 162 KMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA 241 (479)
T ss_dssp HHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997777899999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCC-
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFD- 337 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~- 337 (414)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+
T Consensus 242 a-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~ 320 (479)
T 2imp_A 242 A-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAER 320 (479)
T ss_dssp H-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTC
T ss_pred h-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCcccc
Confidence 9 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 321 ~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~ 396 (479)
T 2imp_A 321 NDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT 396 (479)
T ss_dssp SSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESS
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCC
Confidence 9999999999999999999999999999999999976333689999999999999999999999999999999986
No 20
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=6.1e-88 Score=683.30 Aligned_cols=395 Identities=36% Similarity=0.613 Sum_probs=367.3
Q ss_pred ccCCCCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHH
Q 015020 13 LFKMPEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKF 92 (414)
Q Consensus 13 ~~~~~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~ 92 (414)
..|...+...++||||+|+.+.+ ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++
T Consensus 15 ~~~~~~~~~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~ 91 (495)
T 1wnd_A 15 LYKKAGLMQHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKL 91 (495)
T ss_dssp -------CCCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHH
T ss_pred ccccccccccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHH
Confidence 34444555578999999997655 7899999999999999999999999999999999999 89999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEEEcCCch
Q 015020 93 ADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGHIIPWNF 171 (414)
Q Consensus 93 a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~ 171 (414)
++.|++++++|++++++|+|||+.+++..|+..+++.++++++++++..++..+.. .+...++.++|+|||++|+||||
T Consensus 92 a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~ 171 (495)
T 1wnd_A 92 ADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNY 171 (495)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcc
Confidence 99999999999999999999999999754899999999999998877665544422 34457889999999999999999
Q ss_pred hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHH
Q 015020 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVG 251 (414)
Q Consensus 172 P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g 251 (414)
|+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|++.+++..|++||++|.|+||||+.+|
T Consensus 172 P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G 250 (495)
T 1wnd_A 172 PLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATG 250 (495)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHH
T ss_pred hHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999 99999999999777889999999999999999999999
Q ss_pred HHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 252 RQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 252 ~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 251 ~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 329 (495)
T 1wnd_A 251 EHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLK 329 (495)
T ss_dssp HHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhcc
Confidence 99999998 78999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcC-CEEEeCCc-ccCCCCCeEeeEEEeeCCCCCcccccccccceeeEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREG-ATLLTGGK-PIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALM 409 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~ 409 (414)
+|+|.++++++|||+++.+++++.++|++++++| +++++||. .. ..|+|++||||.+++++|++++||+||||++|+
T Consensus 330 ~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 408 (495)
T 1wnd_A 330 SGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT 408 (495)
T ss_dssp BCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence 9999999999999999999999999999999999 99999997 53 369999999999999999999999999999999
Q ss_pred EEec
Q 015020 410 KFKI 413 (414)
Q Consensus 410 ~~~~ 413 (414)
+|++
T Consensus 409 ~~~~ 412 (495)
T 1wnd_A 409 PFDN 412 (495)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9986
No 21
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.1e-87 Score=687.40 Aligned_cols=387 Identities=33% Similarity=0.569 Sum_probs=368.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
...++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 36 ~~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 111 (538)
T 3qan_A 36 KEYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRR 111 (538)
T ss_dssp EEECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHH
T ss_pred cccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHH
Confidence 3568999999997 668999999999 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHH-hhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGA-ADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.+++. |+..+++.+++++.+ .+...+...+...+...++.++|+|||++|+|||||+.+.+
T Consensus 112 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 190 (538)
T 3qan_A 112 RKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMV 190 (538)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHH
Confidence 9999999999999999999997 999999999999998 55555555543345678899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|++.++++.|+.||+||.|+||||+.+|+.|++.
T Consensus 191 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~ 270 (538)
T 3qan_A 191 GTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYER 270 (538)
T ss_dssp HHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999877899999999999999999999999999999
Q ss_pred HHhCC------CcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccc
Q 015020 258 AATSN------LKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 258 ~~~~~------~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~ 331 (414)
++ .+ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++
T Consensus 271 aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 349 (538)
T 3qan_A 271 AA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLT 349 (538)
T ss_dssp HT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCC
T ss_pred hh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhcc
Confidence 98 67 999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+|+|.++++++||++++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|
T Consensus 350 vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~ 428 (538)
T 3qan_A 350 VGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKA 428 (538)
T ss_dssp BSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEe
Confidence 9999999999999999999999999999999999 999999875447999999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 429 ~~ 430 (538)
T 3qan_A 429 ND 430 (538)
T ss_dssp SS
T ss_pred CC
Confidence 85
No 22
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=8.8e-88 Score=683.89 Aligned_cols=394 Identities=42% Similarity=0.727 Sum_probs=375.2
Q ss_pred CCccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 015020 17 PEIKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLI 96 (414)
Q Consensus 17 ~~~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l 96 (414)
.++...++||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|
T Consensus 2 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (490)
T 2ve5_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL 79 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 456678899999999887788999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 97 EEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 97 ~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
++++++|++++++|+|||..+++..|+..+++.++++++++++..+...+...+...++.++|+|||++|+|||||+...
T Consensus 80 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 159 (490)
T 2ve5_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHH
Confidence 99999999999999999999998459999999999999998877665555445667889999999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|.+.++++.|+.||++|.|+||||+.+|+.|++
T Consensus 160 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~ 239 (490)
T 2ve5_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999977789999999999999999999999999999
Q ss_pred HH-HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 257 AA-ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 257 ~~-~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
.+ + +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|
T Consensus 240 ~a~a-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 318 (490)
T 2ve5_A 240 SASS-SSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHH-HHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred hchh-ccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 99 7 789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC----CCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG----KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
.++++++||++++.+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~ 398 (490)
T 2ve5_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEe
Confidence 99999999999999999999999999999999999998632 36899999999999999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 399 ~~ 400 (490)
T 2ve5_A 399 DD 400 (490)
T ss_dssp SC
T ss_pred CC
Confidence 86
No 23
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=8.3e-88 Score=686.01 Aligned_cols=388 Identities=43% Similarity=0.717 Sum_probs=368.5
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++
T Consensus 26 ~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 103 (515)
T 2d4e_A 26 PALHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHA 103 (515)
T ss_dssp CBCEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 35689999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMK 179 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~ 179 (414)
++|++++++|+|||+.+++. |+..+++.++++++++++..+...+. ..+...++.++|+|||++|+|||||+...+++
T Consensus 104 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 182 (515)
T 2d4e_A 104 DELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWR 182 (515)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhh
Confidence 99999999999999999985 99999999999999888776655443 23456788999999999999999999999999
Q ss_pred HhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 180 VSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 180 l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 183 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa 262 (515)
T 2d4e_A 183 IAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAA 262 (515)
T ss_dssp HHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred hhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999977788999999999999999999999999999999
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.+++
T Consensus 263 -~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 341 (515)
T 2d4e_A 263 -DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPE 341 (515)
T ss_dssp -GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTT
T ss_pred -hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCccccc
Confidence 7899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC--------CCCCeEeeEEEeeCCCCCcccccccccceeeEEEE
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG--------KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~ 411 (414)
+++||++++++++++.++|++++++|+++++||.... ..|+|++||||.+ +++|++++||+||||++|++|
T Consensus 342 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~ 420 (515)
T 2d4e_A 342 TEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPF 420 (515)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEee
Confidence 9999999999999999999999999999999997642 2599999999999 999999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 421 ~~ 422 (515)
T 2d4e_A 421 KD 422 (515)
T ss_dssp SS
T ss_pred CC
Confidence 86
No 24
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.5e-87 Score=682.06 Aligned_cols=384 Identities=33% Similarity=0.534 Sum_probs=365.9
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 10 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 87 (505)
T 3prl_A 10 FNANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEER 87 (505)
T ss_dssp EECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 345789999999887788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc--C----CccceeeecCCceEEEEcCCchhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R----ALQGYTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++|++++++|+|||..+++. |+..+++.++++++++++..+...+.. . +...++.++|+|||++|+|||||+
T Consensus 88 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~ 166 (505)
T 3prl_A 88 KEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166 (505)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHH
Confidence 999999999999999999997 999999999999999887665544422 2 345788999999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||++|.|+||||+.+|+.
T Consensus 167 ~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~ 246 (505)
T 3prl_A 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGER 246 (505)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999987889999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 247 i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g 323 (505)
T 3prl_A 247 ISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVG 323 (505)
T ss_dssp HHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBS
T ss_pred HHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccC
Confidence 999876 89999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||. +++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 324 ~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~ 399 (505)
T 3prl_A 324 SPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399 (505)
T ss_dssp CTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCC
Confidence 999 9999999999999999999999999999999999974 589999999999999999999999999999999986
No 25
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1e-86 Score=676.27 Aligned_cols=399 Identities=29% Similarity=0.474 Sum_probs=372.2
Q ss_pred cccccccCCCCcc-ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHH
Q 015020 8 GSCKSLFKMPEIK-FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERR 86 (414)
Q Consensus 8 ~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~ 86 (414)
.....||+..+++ ..+.||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~ 84 (500)
T 2j6l_A 9 QPQYAWLKELGLREENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRG 84 (500)
T ss_dssp SGGGGGGGGGTCCSEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHH
T ss_pred cchhHHHHhcCCCCCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHH
Confidence 4555678877774 488999999994 567899999999999999999999999999999999999 89999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CCccceeeecCCceEEE
Q 015020 87 GIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RALQGYTLREPIGVVGH 165 (414)
Q Consensus 87 ~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~ 165 (414)
++|+++++.|++++++|++++++|+|||..+++. |+..+++.+++++.+++++.+...+.. .+...++.++|+|||++
T Consensus 85 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~ 163 (500)
T 2j6l_A 85 EIVRQIGDALREKIQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGI 163 (500)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEE
Confidence 9999999999999999999999999999999975 999999999999998877665544322 23446788999999999
Q ss_pred EcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHhhhCCCcCE
Q 015020 166 IIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK----LAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (414)
Q Consensus 166 i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~----~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~ 241 (414)
|+|||||+.+.++++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||++|.
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~ 242 (500)
T 2j6l_A 164 ITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNL 242 (500)
T ss_dssp ECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSE
T ss_pred ECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCE
Confidence 999999999999999999999999999999999999999988876 46999999999999 7789999999999999
Q ss_pred EEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHH
Q 015020 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (414)
Q Consensus 242 v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 321 (414)
|+||||+.+|+.|++.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus 243 I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~ 321 (500)
T 2j6l_A 243 LSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVN 321 (500)
T ss_dssp EEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHH
T ss_pred EEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHH
Confidence 999999999999999998 7899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCccccccc
Q 015020 322 KLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEI 401 (414)
Q Consensus 322 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~ 401 (414)
+|+++++++++|+|.++++++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+
T Consensus 322 ~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEi 401 (500)
T 2j6l_A 322 RLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTET 401 (500)
T ss_dssp HHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCC
T ss_pred HHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcc
Confidence 99999999999999999999999999999999999999999999999999986434699999999999999999999999
Q ss_pred ccceeeEEEEec
Q 015020 402 FGPVMALMKFKI 413 (414)
Q Consensus 402 fgPv~~v~~~~~ 413 (414)
||||++|++|++
T Consensus 402 FGPVl~v~~~~~ 413 (500)
T 2j6l_A 402 FAPILYVFKFQN 413 (500)
T ss_dssp SSSEEEEEEECC
T ss_pred cCceEEEEeeCC
Confidence 999999999986
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=7.2e-87 Score=675.27 Aligned_cols=385 Identities=37% Similarity=0.645 Sum_probs=366.3
Q ss_pred cceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHH
Q 015020 22 TKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAE 101 (414)
Q Consensus 22 ~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 101 (414)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|++
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 5789999999754 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhHHhH
Q 015020 102 VLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKV 180 (414)
Q Consensus 102 ~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l 180 (414)
+|++++++|+|||..+++. |+..+++.++++++++++..+...+. ..+...++.++|+|||++|+|||||+...++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999986 99999999999999988766655443 234567899999999999999999999999999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVP---GFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~---g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |++.++++.|++||++|.|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8667789999999999999999999999999999
Q ss_pred HHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhc-cccCCCC
Q 015020 258 AATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKA-WVVGDPF 336 (414)
Q Consensus 258 ~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~-~~~g~p~ 336 (414)
++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++ +++|+|.
T Consensus 248 aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 99 899999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCC-eEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGY-YIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++|||+++.+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|++
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 403 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDT 403 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESC
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCC
Confidence 999999999999999999999999999999999999864 3589 999999999999999999999999999999986
No 27
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.8e-86 Score=675.69 Aligned_cols=387 Identities=36% Similarity=0.587 Sum_probs=369.6
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
++..++||||+|+.+.++++++++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 10 ~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 87 (508)
T 3r64_A 10 IDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELLEE 87 (508)
T ss_dssp BCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHH
Confidence 4566799999999887788999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec--cCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
++++|++++++|+|||..+++. |+..+++.+++++.+.++..+ ..+. ..+...++.++|+|||++|+|||||+...
T Consensus 88 ~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~ 165 (508)
T 3r64_A 88 HREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLS 165 (508)
T ss_dssp THHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred hHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHHHH
Confidence 9999999999999999999997 999999999999988876655 4442 23467889999999999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~-~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
++++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+++|++.+.++.|++||++|.|+||||+.+|+.|+
T Consensus 166 ~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~ 245 (508)
T 3r64_A 166 IRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRRVG 245 (508)
T ss_dssp HHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHHHH
T ss_pred HHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHHHH
Confidence 99999999999999999999999999 99999999999999999999997778999999999999999999999999999
Q ss_pred HHHHhC--CCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 256 QAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 256 ~~~~~~--~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
+.++ + +++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 246 ~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 324 (508)
T 3r64_A 246 ELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTG 324 (508)
T ss_dssp HHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCBS
T ss_pred HHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 9998 7 899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|.++++++|||+++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 325 ~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 401 (508)
T 3r64_A 325 DPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADD 401 (508)
T ss_dssp CTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEESS
T ss_pred CCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeCC
Confidence 99999999999999999999999999999999999999975 589999999999999999999999999999999985
No 28
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-86 Score=674.59 Aligned_cols=387 Identities=28% Similarity=0.487 Sum_probs=366.3
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 5 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (485)
T 4dng_A 5 TLNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHEN 82 (485)
T ss_dssp GCCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHH
Confidence 456799999999877788999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec--cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM--SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.+.+...+...+. ..+...++.++|+|||++|+|||||+...+
T Consensus 83 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 161 (485)
T 4dng_A 83 RDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSM 161 (485)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHH
Confidence 999999999999999999997 99999999999999988766655442 234678899999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIA-LYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~-~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
+++++||++||+||+|||+.+|+++ .+|.+++.++|+|+|++|+++|++.++++.|++||+++.|+||||+.+|+.|++
T Consensus 162 ~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~ 241 (485)
T 4dng_A 162 RSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGE 241 (485)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHH
Confidence 9999999999999999999999999 999999999999999999999987779999999999999999999999999999
Q ss_pred HHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCC
Q 015020 257 AAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPF 336 (414)
Q Consensus 257 ~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~ 336 (414)
.++ ++++|+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.
T Consensus 242 ~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~ 320 (485)
T 4dng_A 242 IAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQT 320 (485)
T ss_dssp HHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred HHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCC
Confidence 998 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 337 DPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 337 ~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++++||++++.+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 321 ~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~ 394 (485)
T 4dng_A 321 DPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGS 394 (485)
T ss_dssp STTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESS
T ss_pred cCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCC
Confidence 99999999999999999999999999999999999975 689999999999999999999999999999999985
No 29
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.1e-86 Score=670.66 Aligned_cols=376 Identities=31% Similarity=0.548 Sum_probs=353.1
Q ss_pred eeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHH
Q 015020 24 LFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVL 103 (414)
Q Consensus 24 ~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 103 (414)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|+++++.|++++++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999974 45 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhH
Q 015020 104 AVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPA 183 (414)
Q Consensus 104 ~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~A 183 (414)
++++++|+|||..+++. |+..+++.+++++.+++++.+...+.. +...++.++|+|||++|+|||||+...++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999986 999999999999999887765544432 5678899999999999999999999999999999
Q ss_pred hhcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 184 LAAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 184 LaaGN~vvlkps~~~~~~~~~l~~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
|++||+||+|||+.+|+++.+|++++.++ |+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988788999999999999999999999999998876
Q ss_pred hCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCC
Q 015020 260 TSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPA 339 (414)
Q Consensus 260 ~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~ 339 (414)
+||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|++++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|||++..+++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|++
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~ 381 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE 381 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999975
No 30
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=4e-86 Score=670.20 Aligned_cols=388 Identities=34% Similarity=0.555 Sum_probs=365.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
..+++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 4 ~~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 81 (486)
T 1t90_A 4 RKLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQH 81 (486)
T ss_dssp CBCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHH
Confidence 346789999999876778999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.+.+...++..+ ...+...++.++|+|||++|+|||||+...++
T Consensus 82 ~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 160 (486)
T 1t90_A 82 KEELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCW 160 (486)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHH
Confidence 999999999999999999986 9999999999998776665554433 22345678899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.+..|++||+++.|+||||+.+|+.|++.+
T Consensus 161 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~a 239 (486)
T 1t90_A 161 MFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKG 239 (486)
T ss_dssp HHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 557899999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCc-eEeecchHHHHHHHHHHHHhccccCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSR-VYVQEGIYDEFEKKLVEKAKAWVVGDPFD 337 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~-v~V~~~i~~~f~~~l~~~~~~~~~g~p~~ 337 (414)
+ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++|+++++++++|+|.+
T Consensus 240 a-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~ 317 (486)
T 1t90_A 240 S-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLD 317 (486)
T ss_dssp H-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTS
T ss_pred h-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCc
Confidence 8 789999999999999999999999999999999999999999999999 999999 9999999999999999999999
Q ss_pred CCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-CCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 338 PAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-GKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 338 ~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++++||++++.+++++.++|++++++|+++++||... ...|+|++||||.+++++|++++||+||||++|++|++
T Consensus 318 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~ 394 (486)
T 1t90_A 318 DGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKN 394 (486)
T ss_dssp TTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCC
Confidence 99999999999999999999999999999999999743 13589999999999999999999999999999999986
No 31
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.8e-86 Score=668.25 Aligned_cols=382 Identities=31% Similarity=0.500 Sum_probs=361.7
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
+.+++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++|
T Consensus 3 ~~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 78 (475)
T 1euh_A 3 KQYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRD 78 (475)
T ss_dssp CBCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHh
Confidence 4568999999997543 899999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc-CC----ccc-eeeecCCceEEEEcCCchhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS-RA----LQG-YTLREPIGVVGHIIPWNFPT 173 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~~P~Gvv~~i~p~n~P~ 173 (414)
+++|++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+ ... ++.++|+|||++|+|||||+
T Consensus 79 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~ 157 (475)
T 1euh_A 79 KEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPV 157 (475)
T ss_dssp HHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchH
Confidence 999999999999999999986 999999999999998877655543322 23 345 89999999999999999999
Q ss_pred HhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 174 TMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 174 ~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
...++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.
T Consensus 158 ~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~ 237 (475)
T 1euh_A 158 NLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGER 237 (475)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHH
Confidence 99999999999999999999999999999999999999999999999999977778999999999999999999999999
Q ss_pred HHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccC
Q 015020 254 VMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVG 333 (414)
Q Consensus 254 i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g 333 (414)
|++.++ ++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|
T Consensus 238 i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g 314 (475)
T 1euh_A 238 IGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIG 314 (475)
T ss_dssp HHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBS
T ss_pred HHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCC
Confidence 999876 79999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 334 DPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 334 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+|.+ ++++|||+++.+++++.++|++++++|+++++||.. .|+|++||||.+++++|++++||+||||++|++|++
T Consensus 315 ~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 390 (475)
T 1euh_A 315 NPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTS 390 (475)
T ss_dssp CGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESC
T ss_pred Cccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCC
Confidence 9999 999999999999999999999999999999999975 589999999999999999999999999999999985
No 32
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=6.7e-86 Score=666.61 Aligned_cols=371 Identities=26% Similarity=0.431 Sum_probs=356.4
Q ss_pred eEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhh
Q 015020 38 TFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSW 117 (414)
Q Consensus 38 ~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~ 117 (414)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 489999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCC
Q 015020 118 AKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQ 197 (414)
Q Consensus 118 a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~ 197 (414)
++. |+..+++.+++++..+++..+...+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.
T Consensus 83 a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 996 9999999999999998887666554445567899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
+|+++.+|++++.++|+|+|++|+|+|++.++++ |+.||+||.|+||||+.+|+.|++.++ +++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHh-ccCCceEeecCCCCcce
Confidence 9999999999999999999999999998777788 999999999999999999999999999 78999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++|||+++.+++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 375 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVED 375 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESS
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCC
Confidence 99999999999999986556799999999999999999999999999999999986
No 33
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.1e-86 Score=669.68 Aligned_cols=388 Identities=38% Similarity=0.608 Sum_probs=366.2
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++
T Consensus 5 ~~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 82 (478)
T 3ty7_A 5 RDYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYEN 82 (478)
T ss_dssp EECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3456899999999987888999999999999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFM 178 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~ 178 (414)
++++|++++++|+|||+.+++..|+..+++.++++++.+++..+... ....++.++|+|||++|+|||||+...++
T Consensus 83 ~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 158 (478)
T 3ty7_A 83 RKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSL 158 (478)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHH
Confidence 99999999999999999999435999999999999998877655432 24578899999999999999999999999
Q ss_pred hHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 179 KVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 179 ~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++.++++.|+.||++|.|+||||+.+|+.|++.+
T Consensus 159 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~a 238 (478)
T 3ty7_A 159 KLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA 238 (478)
T ss_dssp HHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CST
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998778999999999999999999999999999999
Q ss_pred HhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCC
Q 015020 259 ATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDP 338 (414)
Q Consensus 259 ~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~ 338 (414)
+ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++
T Consensus 239 a-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~ 317 (478)
T 3ty7_A 239 A-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRED 317 (478)
T ss_dssp T-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTST
T ss_pred H-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 8 889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCccc-C--CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 339 AVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPI-G--KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 339 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~-~--~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++++||++++.+++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 318 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~ 395 (478)
T 3ty7_A 318 GTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYND 395 (478)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCC
Confidence 9999999999999999999999999999999999432 1 3689999999999999999999999999999999985
No 34
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=6.9e-86 Score=672.55 Aligned_cols=386 Identities=32% Similarity=0.550 Sum_probs=362.8
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCC-CCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPR-TGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~-tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
.+++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|+++
T Consensus 37 ~~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (516)
T 1uzb_A 37 HYPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRR 112 (516)
T ss_dssp EECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 4578999999963 5789999999 6999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee--ccCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK--MSRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
+++|++++++|+|||+.+++. |+..+++.+++|+..++++.+...+ ...+...++.++|+|||++|+|||||+.+.+
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 191 (516)
T 1uzb_A 113 KRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFT 191 (516)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHH
Confidence 999999999999999999986 9999999999999988877654422 1234567889999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|++||+|+.|+||||+.+|+.|++.
T Consensus 192 ~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~ 271 (516)
T 1uzb_A 192 GMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEA 271 (516)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999777889999999999999999999999999998
Q ss_pred HHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 258 ~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
++. +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++
T Consensus 272 aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 351 (516)
T 1uzb_A 272 AGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSV 351 (516)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCB
T ss_pred hhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccC
Confidence 862 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
|+| ++++++|||+++.+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 352 G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 429 (516)
T 1uzb_A 352 GPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVK 429 (516)
T ss_dssp SCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeC
Confidence 999 99999999999999999999999999999 8999997632469999999999999999999999999999999998
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 430 ~ 430 (516)
T 1uzb_A 430 D 430 (516)
T ss_dssp S
T ss_pred C
Confidence 5
No 35
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=1.1e-85 Score=668.30 Aligned_cols=382 Identities=29% Similarity=0.462 Sum_probs=361.6
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhH
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHA 100 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (414)
.+++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+. .|+.+|..+|.++|+++++.|++|+
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 46789999999753 78999999999999999999999999999999999951 4999999999999999999999999
Q ss_pred HHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeecc--C---CccceeeecCCceEEEEcCCchhHHh
Q 015020 101 EVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMS--R---ALQGYTLREPIGVVGHIIPWNFPTTM 175 (414)
Q Consensus 101 ~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~P~Gvv~~i~p~n~P~~~ 175 (414)
++|++++++|+|||..+++. |+..+++.+++++.++++..+...+.. . +...++.++|+|||++|+|||||+..
T Consensus 95 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 99999999999999999985 999999999999998887766554432 2 23578999999999999999999999
Q ss_pred hHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHH
Q 015020 176 FFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVM 255 (414)
Q Consensus 176 ~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~ 255 (414)
.++++++||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++|++ ++++.|+.||++|.|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8899999999999999999999999999
Q ss_pred HHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCC
Q 015020 256 QAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDP 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p 335 (414)
+.++ +||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCC-CeEeeEEEeeCC---CCCcccccccccceeeEEEE
Q 015020 336 FDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKG-YYIEPTIFTNVT---EDMLIAKNEIFGPVMALMKF 411 (414)
Q Consensus 336 ~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptvl~~~~---~~~~i~~~E~fgPv~~v~~~ 411 (414)
.++++++|||+++.+++++.++|++++++||++++||.. .| +|++||||.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred ec
Q 015020 412 KI 413 (414)
Q Consensus 412 ~~ 413 (414)
++
T Consensus 407 ~~ 408 (501)
T 1uxt_A 407 KD 408 (501)
T ss_dssp SS
T ss_pred CC
Confidence 86
No 36
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.5e-85 Score=662.49 Aligned_cols=384 Identities=27% Similarity=0.403 Sum_probs=363.7
Q ss_pred ceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHH
Q 015020 23 KLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEV 102 (414)
Q Consensus 23 ~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 102 (414)
++||||+|+.+. +.++.++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999764 46899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhh
Q 015020 103 LAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSP 182 (414)
Q Consensus 103 l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ 182 (414)
|++++++|+|||..+++. |+..+++.+++++...+...+...+...+...++.++|+|||++|+|||||+...++++++
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999986 9999999999999888776665443333445677899999999999999999999999999
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCC
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSN 262 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~ 262 (414)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||++|.|+||||+.+|+.|++.++ .+
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa-~~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFG-GQ 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTT-TC
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhh-cc
Confidence 999999999999999999999999999999999999999999 5689999999999999999999999999999998 78
Q ss_pred Ccce-eeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecch-HHHHHHHHHHHHhccccCC-CCCCC
Q 015020 263 LKPV-SLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGI-YDEFEKKLVEKAKAWVVGD-PFDPA 339 (414)
Q Consensus 263 ~~~~-~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i-~~~f~~~l~~~~~~~~~g~-p~~~~ 339 (414)
++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++|+++++++++|+ |.+++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 9998 7999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 340 VRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 340 ~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++|||+++.+++++.++|++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|++
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~ 393 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSD 393 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESS
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCC
Confidence 9999999999999999999999999999999998655679999999998 999999999999999999999985
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=1.2e-84 Score=666.30 Aligned_cols=388 Identities=26% Similarity=0.389 Sum_probs=361.6
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
..+++||||+|+.+. ..+.++||.| |+++++++.++.+|+++||++|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 457899999999753 4678999998 799999999999999999999999999 89999999999999999999999
Q ss_pred h-HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceee-ccCCccceeeecCCceEEEEcCCchhHHhh
Q 015020 99 H-AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLK-MSRALQGYTLREPIGVVGHIIPWNFPTTMF 176 (414)
Q Consensus 99 ~-~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~ 176 (414)
+ +++|+.++++|+|||+.+++..++..+++.+++++.+++++.+.... ...+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 99999999999999999998623999999999999998877653321 112344567788889999999999999999
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
.+++++|| +||+||+|||+.+|+++.+|+++|.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred HHHhCCCc------ceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcc
Q 015020 257 AAATSNLK------PVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 257 ~~~~~~~~------~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~ 330 (414)
.++ ++++ |+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++
T Consensus 297 ~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 998 6777 499999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeE
Q 015020 331 VVGDP-FDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMAL 408 (414)
Q Consensus 331 ~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v 408 (414)
++|+| .|+++++||++++.+++++.++|+++++ +|+++++||...+..|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876567999999999999999999999999999999
Q ss_pred EEEec
Q 015020 409 MKFKI 413 (414)
Q Consensus 409 ~~~~~ 413 (414)
++|++
T Consensus 456 ~~~~d 460 (563)
T 4e3x_A 456 YVYPD 460 (563)
T ss_dssp EEECG
T ss_pred EEECC
Confidence 99975
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=4.4e-83 Score=645.29 Aligned_cols=373 Identities=28% Similarity=0.448 Sum_probs=355.3
Q ss_pred CCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch
Q 015020 36 GKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH 115 (414)
Q Consensus 36 ~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~ 115 (414)
...++++||+||+++++++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||.
T Consensus 6 ~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~ 83 (462)
T 3etf_A 6 ATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPI 83 (462)
T ss_dssp CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCH
T ss_pred cCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCH
Confidence 46789999999999999999999999999999999999 8999999999999999999999999999999999999999
Q ss_pred hhhhhCcHHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecC
Q 015020 116 SWAKMGDIPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPA 195 (414)
Q Consensus 116 ~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps 195 (414)
.+++. |+..+++.+++++++.++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 84 ~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps 162 (462)
T 3etf_A 84 KQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKHA 162 (462)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECC
Confidence 99986 99999999999999887766554222245567899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCc
Q 015020 196 EQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSP 275 (414)
Q Consensus 196 ~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~ 275 (414)
+.+|.++.+|.+++.++|+|+|++|+++| +.+.+..|+.||+++.|+||||+.+|+.|++.++ ++++|+++|+|||||
T Consensus 163 ~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p 240 (462)
T 3etf_A 163 PNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAG-AALKKCVLELGGSDP 240 (462)
T ss_dssp TTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHH-HTTCCEEEECCCCEE
T ss_pred CCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHh-ccCCceEEEcCCCCc
Confidence 99999999999999999999999999999 4577899999999999999999999999999999 789999999999999
Q ss_pred eEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHH
Q 015020 276 LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRIL 355 (414)
Q Consensus 276 ~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~ 355 (414)
+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+++++++++|+|.++++++||++++.+++++.
T Consensus 241 ~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~ 320 (462)
T 3etf_A 241 FIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELH 320 (462)
T ss_dssp EEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHH
T ss_pred cEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 321 ~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~ 378 (462)
T 3etf_A 321 QQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKD 378 (462)
T ss_dssp HHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred HHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCC
Confidence 9999999999999999986556799999999999999999999999999999999985
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.5e-82 Score=680.41 Aligned_cols=388 Identities=34% Similarity=0.520 Sum_probs=367.0
Q ss_pred cccceeEcCeEeeCCCCCeEEeecCCC-CceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 015020 20 KFTKLFINGEFVDSVSGKTFETIDPRT-GEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEE 98 (414)
Q Consensus 20 ~~~~~~i~g~~~~~~~~~~~~v~~P~t-g~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~ 98 (414)
..+++||||+|+. ++++++++||+| ++++++++.++.+++++|+++|++||. .|+.+|..+|.++|++++++|++
T Consensus 530 ~~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~ 605 (1026)
T 4f9i_A 530 KTYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARK 605 (1026)
T ss_dssp EEECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHH
Confidence 3578999999996 457899999998 999999999999999999999999999 89999999999999999999999
Q ss_pred hHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCceeec-cCCccceeeecCCceEEEEcCCchhHHhhH
Q 015020 99 HAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGEVLKM-SRALQGYTLREPIGVVGHIIPWNFPTTMFF 177 (414)
Q Consensus 99 ~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~ 177 (414)
++++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..+++.++|+|||++|+|||||+.+.+
T Consensus 606 ~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~ 684 (1026)
T 4f9i_A 606 RLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISM 684 (1026)
T ss_dssp THHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHH
T ss_pred HHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHH
Confidence 9999999999999999999986 99999999999999988776544332 345667889999999999999999999999
Q ss_pred HhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHH
Q 015020 178 MKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQA 257 (414)
Q Consensus 178 ~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~ 257 (414)
+++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|+.|+||||+.+|+.|++.
T Consensus 685 ~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~ 764 (1026)
T 4f9i_A 685 GMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIER 764 (1026)
T ss_dssp HHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred HHh-----CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc
Q 015020 258 AAT-----SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV 332 (414)
Q Consensus 258 ~~~-----~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~ 332 (414)
++. ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+++|+++++++++
T Consensus 765 aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~v 844 (1026)
T 4f9i_A 765 AAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844 (1026)
T ss_dssp HTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCB
T ss_pred hhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhccc
Confidence 872 368999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEe
Q 015020 333 GDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 333 g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~ 412 (414)
|+|.++++++||+|++.+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 845 G~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 923 (1026)
T 4f9i_A 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAK 923 (1026)
T ss_dssp CCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEES
T ss_pred CCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999997654459999999999999999999999999999999997
Q ss_pred c
Q 015020 413 I 413 (414)
Q Consensus 413 ~ 413 (414)
+
T Consensus 924 d 924 (1026)
T 4f9i_A 924 D 924 (1026)
T ss_dssp S
T ss_pred C
Confidence 5
No 40
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=8.8e-82 Score=645.31 Aligned_cols=383 Identities=24% Similarity=0.365 Sum_probs=348.2
Q ss_pred ccceeEcCeEeeCCCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhh-cccCCCCCCCHHHHHHHHHHHHHHHHHh
Q 015020 21 FTKLFINGEFVDSVSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQA-FDHGPWPRFSGAERRGIMLKFADLIEEH 99 (414)
Q Consensus 21 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a-~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 99 (414)
.+++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.+|..+|.++|+++++.|++|
T Consensus 7 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~ 82 (534)
T 2y53_A 7 LLKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAK 82 (534)
T ss_dssp ECCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHh
Confidence 467899999997544 579999999999999999998 9999999999999 58 899999999999999999999999
Q ss_pred HHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhhcCc-------eeecc-CC-ccceeeecCC-ceEEEEcCC
Q 015020 100 AEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKIHGE-------VLKMS-RA-LQGYTLREPI-GVVGHIIPW 169 (414)
Q Consensus 100 ~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~-------~~~~~-~~-~~~~~~~~P~-Gvv~~i~p~ 169 (414)
+++|++++++|+|||+.+++. |+..+++.+++|+.+++++.+. ..+.. .+ ...+..++|+ |||++|+||
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~Pw 161 (534)
T 2y53_A 83 RGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAF 161 (534)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCT
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCC
Confidence 999999999999999999986 9999999999999988665331 11211 11 2357889997 999999999
Q ss_pred chhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCH
Q 015020 170 NFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAG-VPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGST 248 (414)
Q Consensus 170 n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ag-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~ 248 (414)
|||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|++.+++..| +++|.|+||||+
T Consensus 162 N~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~ 238 (534)
T 2y53_A 162 NFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSA 238 (534)
T ss_dssp TCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCH
T ss_pred chHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 79999999999654433322 679999999999
Q ss_pred HHHHHHHHHHH-hCCCcceeeecCCCCceEEcCCC-----CHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHH
Q 015020 249 DVGRQVMQAAA-TSNLKPVSLELGGKSPLLIFDDV-----DVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKK 322 (414)
Q Consensus 249 ~~g~~i~~~~~-~~~~~~~~~elgG~~~~iV~~da-----dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~ 322 (414)
.+|+.|++.++ .+++||+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus 239 ~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~ 318 (534)
T 2y53_A 239 DTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEA 318 (534)
T ss_dssp HHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHH
Confidence 99999998763 36899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccC------CCCCeEeeEEEeeCCCC--C
Q 015020 323 LVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIG------KKGYYIEPTIFTNVTED--M 394 (414)
Q Consensus 323 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~------~~g~~~~Ptvl~~~~~~--~ 394 (414)
|+++++++++|||.++++++|||+++.+++++.++|+++ .+|+++++||.... ..|+|++||||.+++++ |
T Consensus 319 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~ 397 (534)
T 2y53_A 319 LKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNAT 397 (534)
T ss_dssp HHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCS
T ss_pred HHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccC
Confidence 999999999999999999999999999999999999999 68999999997421 35899999999999987 6
Q ss_pred cccccccccceeeEEEEe
Q 015020 395 LIAKNEIFGPVMALMKFK 412 (414)
Q Consensus 395 ~i~~~E~fgPv~~v~~~~ 412 (414)
++++||+||||++|++|+
T Consensus 398 ~i~~eEiFGPVl~v~~~~ 415 (534)
T 2y53_A 398 LLHDVEVFGPVASVAPYR 415 (534)
T ss_dssp STTTCCCSSSEEEEEEEC
T ss_pred HHHhCCCcCCEEEEEEEC
Confidence 999999999999999998
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.2e-81 Score=635.98 Aligned_cols=372 Identities=30% Similarity=0.459 Sum_probs=347.3
Q ss_pred CCCCeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCC
Q 015020 34 VSGKTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGK 113 (414)
Q Consensus 34 ~~~~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk 113 (414)
.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+++|..+|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred chhhhhhCcHHHHHHHHHHHHHHhhhhcCcee-ec-cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEE
Q 015020 114 LHSWAKMGDIPGAANTLRYYAGAADKIHGEVL-KM-SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMI 191 (414)
Q Consensus 114 ~~~~a~~~ev~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vv 191 (414)
+.... . |+...+..+++++..+.+...... .. .++...+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~~-~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSITV-L-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHHH-H-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHHH-H-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 86544 4 899999999999988776543332 21 23445677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecC
Q 015020 192 VKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG 271 (414)
Q Consensus 192 lkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elg 271 (414)
+|||+.+|.++..+.+++.++|+|+|++++++| +.+.+..|+.| ++.|+||||+.+|+.|++.++ ++++|+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa-~~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAA-RRFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHH-HHTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhh-cccccccccCC
Confidence 999999999999999999999999999999999 55788889866 899999999999999999998 78999999999
Q ss_pred CCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHH
Q 015020 272 GKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQF 351 (414)
Q Consensus 272 G~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~ 351 (414)
||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++.++++|+|.++++++||++++.++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCEEEeCCcccC-CCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 352 DRILSYIEHGKREGATLLTGGKPIG-KKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 352 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+++.+++++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~ 377 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPD 377 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECC
Confidence 9999999999999999999997642 4689999999999999999999999999999999985
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=8.8e-78 Score=605.08 Aligned_cols=362 Identities=24% Similarity=0.396 Sum_probs=322.1
Q ss_pred CeEEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh
Q 015020 37 KTFETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS 116 (414)
Q Consensus 37 ~~~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~ 116 (414)
..++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4688999999999999999999999999999999999 99999999999999999999999999999999999999999
Q ss_pred hhhhCcHHHHHHHHHHHHHHhhhhcCc-eeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEE
Q 015020 117 WAKMGDIPGAANTLRYYAGAADKIHGE-VLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIV 192 (414)
Q Consensus 117 ~a~~~ev~~~~~~l~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvl 192 (414)
+++..|+..+++.++++++.+++.... ..+. ..+...++.++|+|||++|+|||||+...++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 998349999999999999887765432 2221 134567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCC
Q 015020 193 KPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGG 272 (414)
Q Consensus 193 kps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG 272 (414)
|||+.+|+++.+|++++.++ +|+|++|+++| +.+.+..|++ +++|.|+||||+.+|+.|++.++ +++||+++||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAA-KHLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHh-hccCceEEECCC
Confidence 99999999999999999999 99999999999 6678999988 78999999999999999999999 899999999999
Q ss_pred CCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHH
Q 015020 273 KSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFD 352 (414)
Q Consensus 273 ~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~ 352 (414)
|||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++++++++ |.++ ++||++++++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 6665 999999999999
Q ss_pred HHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 353 RILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 353 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.++|+++. +++++||... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 371 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDS 371 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESC
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCC
Confidence 9999999863 5999999763 3689999999999999999999999999999999986
No 43
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.1e-78 Score=616.12 Aligned_cols=374 Identities=24% Similarity=0.306 Sum_probs=340.4
Q ss_pred ccccceeEcCeEeeCCCCCeEEeecCCCCceEE-EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 015020 19 IKFTKLFINGEFVDSVSGKTFETIDPRTGEAIA-RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIE 97 (414)
Q Consensus 19 ~~~~~~~i~g~~~~~~~~~~~~v~~P~tg~~i~-~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~ 97 (414)
+...++||||+|+.+.+ ++||+||++++ +++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 35578999999997532 99999999998 9999999999999999999999 8999999999999999999999
Q ss_pred HhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHHHhhhh--cCceee----c---cCCccceeeecCCceEEEEcC
Q 015020 98 EHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAGAADKI--HGEVLK----M---SRALQGYTLREPIGVVGHIIP 168 (414)
Q Consensus 98 ~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~--~~~~~~----~---~~~~~~~~~~~P~Gvv~~i~p 168 (414)
+++++|++++++|+|||+.+++. |+..+++.+++|++.+++. ...... . ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999986 9999999999999988762 222221 0 123456889999999999999
Q ss_pred CchhHHhhH--HhHhhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEE
Q 015020 169 WNFPTTMFF--MKVSPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKV 242 (414)
Q Consensus 169 ~n~P~~~~~--~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v 242 (414)
||||+...+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+|+.|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 89999999999999999999999999998875 468999999999999887899999999999999
Q ss_pred EEecCHHHHHHHHHHHHhCCC--cceeeecCCCCceEEcCCC---CHHHHHHHHHHHHhccCCCccccCCceEeecc-hH
Q 015020 243 SFTGSTDVGRQVMQAAATSNL--KPVSLELGGKSPLLIFDDV---DVNTAADMALLGILFNKGEICVASSRVYVQEG-IY 316 (414)
Q Consensus 243 ~ftGs~~~g~~i~~~~~~~~~--~~~~~elgG~~~~iV~~da---dl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~ 316 (414)
+||||+.+|+.|++.++ +++ +|+++|||||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ ++
T Consensus 259 ~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 99999999999999998 788 9999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCC---
Q 015020 317 DEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTED--- 393 (414)
Q Consensus 317 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~--- 393 (414)
|+|+++|++++++++. ++.+||++++.+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 9999999999999864 367899998888877777764 489999999974 6999999999988887
Q ss_pred CcccccccccceeeEEEEec
Q 015020 394 MLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 394 ~~i~~~E~fgPv~~v~~~~~ 413 (414)
|++++||+||||++|++|++
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~ 425 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGS 425 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESS
T ss_pred ChhhcccccCCeEEEEecCC
Confidence 89999999999999999986
No 44
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=1.7e-76 Score=603.08 Aligned_cols=363 Identities=21% Similarity=0.285 Sum_probs=332.5
Q ss_pred CCCCCeEEeecCCCCceE-EEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Q 015020 33 SVSGKTFETIDPRTGEAI-ARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA 111 (414)
Q Consensus 33 ~~~~~~~~v~~P~tg~~i-~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~ 111 (414)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 345678999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchhhhhhCcHHHHHHHHHHHHHHhhh--hcCceeec----c-C-C-ccceeeecCCceEEEEcCCchhHHhh--HHhH
Q 015020 112 GKLHSWAKMGDIPGAANTLRYYAGAADK--IHGEVLKM----S-R-A-LQGYTLREPIGVVGHIIPWNFPTTMF--FMKV 180 (414)
Q Consensus 112 Gk~~~~a~~~ev~~~~~~l~~~~~~~~~--~~~~~~~~----~-~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~l 180 (414)
|||+.+++. |+..+++.+++|++.+++ ..+..+.. . + + ...++.++|+|||++|+|||||+... .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999999976 999999999999988875 33332210 0 1 1 13578999999999999999999985 4999
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHH
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLA----KLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQ 256 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l----~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~ 256 (414)
++||++||+||+|||+.+|+++.++++++ .++|+|+|++|+++|.+.++++.|++||+||.|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999998 56799999999999977788999999999999999999999999999
Q ss_pred HHHhCCC--cceeeecCCCCceEEcCCCCHH--HHHHHHHHHHhccCCCccccCCceEeecc-hHHHHHHHHHHHHhccc
Q 015020 257 AAATSNL--KPVSLELGGKSPLLIFDDVDVN--TAADMALLGILFNKGEICVASSRVYVQEG-IYDEFEKKLVEKAKAWV 331 (414)
Q Consensus 257 ~~~~~~~--~~~~~elgG~~~~iV~~dadl~--~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~-i~~~f~~~l~~~~~~~~ 331 (414)
.++ +++ ||+++|||||||+||++|||++ .|++.+++++|.|+||.|++++|||||++ ++|+|+++|++++++++
T Consensus 240 ~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 998 665 9999999999999999999999 99999999999999999999999999999 99999999999999986
Q ss_pred cCCCCCCCCCccccCCHHHHHHHHHHHHHHHH-cCCEEEeCCcccCCCCCeEeeEEEeeCCCC---Ccccccccccceee
Q 015020 332 VGDPFDPAVRQGPQVDKKQFDRILSYIEHGKR-EGATLLTGGKPIGKKGYYIEPTIFTNVTED---MLIAKNEIFGPVMA 407 (414)
Q Consensus 332 ~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~---~~i~~~E~fgPv~~ 407 (414)
+ ||++++.+.+++.++|+++++ +|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 3 688888899999999999994 8999999996 2899999999988887 99999999999999
Q ss_pred EEEEec
Q 015020 408 LMKFKI 413 (414)
Q Consensus 408 v~~~~~ 413 (414)
|++|++
T Consensus 385 v~~~~~ 390 (510)
T 1ez0_A 385 IVVCEN 390 (510)
T ss_dssp EEEESS
T ss_pred EEEeCC
Confidence 999986
No 45
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=9.8e-76 Score=590.72 Aligned_cols=345 Identities=27% Similarity=0.402 Sum_probs=315.6
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHHHHH
Q 015020 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRYYAG 135 (414)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~ 135 (414)
.+.+|+++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+|||..+++..|+..++..++++++
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 355689999999999999 999999999999999999999999999999999999999999975599999998888876
Q ss_pred HhhhhcCce----eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH
Q 015020 136 AADKIHGEV----LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL 211 (414)
Q Consensus 136 ~~~~~~~~~----~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~ 211 (414)
......... .....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 654432211 1112234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHH
Q 015020 212 AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMA 291 (414)
Q Consensus 212 aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i 291 (414)
+ +|+|++|+++|++ +.+..|+.| ++|.|+||||+.+|+.|++.++ +++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 455667777 8999999999999999999999 8999999999999999999999999999999
Q ss_pred HHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEeC
Q 015020 292 LLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLTG 371 (414)
Q Consensus 292 ~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 371 (414)
++++|.|+||.|++++|||||++++|+|+++|+++++++ +|+|.++++++|||+++++++++.++| +||++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999998 699999999999999999999999998 69999999
Q ss_pred CcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 372 GKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 372 g~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
|... ..|+|++|||+.+++++|++++||+||||++|++|++
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 363 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRS 363 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSS
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCC
Confidence 9864 4699999999999999999999999999999999985
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.1e-73 Score=613.89 Aligned_cols=352 Identities=31% Similarity=0.468 Sum_probs=332.6
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHHH
Q 015020 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLRY 132 (414)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 132 (414)
++.++.+++++|+++|++||. .|+.+|..+|.++|+++++.|++++++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 789999999999999999999 899999999999999999999999999999999999999999986 99999999999
Q ss_pred HHHHhhhhcCce--eeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH
Q 015020 133 YAGAADKIHGEV--LKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK 210 (414)
Q Consensus 133 ~~~~~~~~~~~~--~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~ 210 (414)
|+..+++..+.. .+...+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999988765543 333456678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhC--CCcceeeecCCCCceEEcCCCCHHHHH
Q 015020 211 LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATS--NLKPVSLELGGKSPLLIFDDVDVNTAA 288 (414)
Q Consensus 211 ~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~--~~~~~~~elgG~~~~iV~~dadl~~a~ 288 (414)
++|+|+|++|+|+|++.+ +..|+.||+|+.|+||||+.+|+.|++.++.. +++|+++|+|||||+||++|||++.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998766 99999999999999999999999999998832 489999999999999999999999999
Q ss_pred HHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEE
Q 015020 289 DMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATL 368 (414)
Q Consensus 289 ~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v 368 (414)
+.+++++|.|+||.|+++++||||++++|+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998 88
Q ss_pred EeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 369 LTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 369 ~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+||..+ ..|+|+.|||+.+ +++++++||+||||++|++|++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~ 899 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRP 899 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECG
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCC
Confidence 888764 4599999999974 7899999999999999999985
No 47
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=3.3e-66 Score=521.88 Aligned_cols=336 Identities=19% Similarity=0.223 Sum_probs=293.7
Q ss_pred EEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHHH
Q 015020 52 RIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTLR 131 (414)
Q Consensus 52 ~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 131 (414)
+++.++.+++++++++|++||+ .|+.++..+|.++|+++++.|++++++|++++++|+||+..+++..+....++
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~--- 79 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASK--- 79 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHH---
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHH---
Confidence 3456678999999999999999 89999999999999999999999999999999999999998875323333333
Q ss_pred HHHHHhhhhcC-ceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHH---
Q 015020 132 YYAGAADKIHG-EVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAH--- 207 (414)
Q Consensus 132 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~--- 207 (414)
++..++..... .......+...+..++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+++
T Consensus 80 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~ 159 (464)
T 3k9d_A 80 HVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIIS 159 (464)
T ss_dssp HHHHHHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred HHHHhhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHH
Confidence 33333332211 11222345678889999999999999999999999999999999999999999999999988654
Q ss_pred -HHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecC-CCCceEEcCCCCHH
Q 015020 208 -LAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELG-GKSPLLIFDDVDVN 285 (414)
Q Consensus 208 -~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elg-G~~~~iV~~dadl~ 285 (414)
++.++|+|+|++++|+|.+.+.++.|++||+||.|+||||+.+ ++.++ +++||+ +|+| ||+|+||++|||++
T Consensus 160 ~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~-~~~kpv-lelG~G~~p~iV~~dADl~ 233 (464)
T 3k9d_A 160 EAAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAY-SSGTPA-IGVGPGNGPAFIERSANIP 233 (464)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHT-TSSSCE-EEBCCCCCEEEECTTSCHH
T ss_pred HHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHH-hcCCcE-EeeCCCCCeEEECCCCCHH
Confidence 5688999999999999987889999999999999999999984 45555 688999 7888 99999999999999
Q ss_pred HHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHH-------hccccCCCC-CCCCCccccCCHHHHHHHHHH
Q 015020 286 TAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKA-------KAWVVGDPF-DPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 286 ~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~ 357 (414)
.|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.++
T Consensus 234 ~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~ 313 (464)
T 3k9d_A 234 RAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANL 313 (464)
T ss_dssp HHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999985 466889887 778999999999999999999
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++.++.+|+++++||.. ++++++++. +|+||||++|++|++
T Consensus 314 ~~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~ 354 (464)
T 3k9d_A 314 AGLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAET 354 (464)
T ss_dssp TTCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESS
T ss_pred hhhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCC
Confidence 99999999999999863 567888875 899999999999985
No 48
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3.9e-66 Score=519.69 Aligned_cols=334 Identities=19% Similarity=0.261 Sum_probs=287.1
Q ss_pred EeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchhhhhhCcHHHHHHHH-H
Q 015020 53 IAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHSWAKMGDIPGAANTL-R 131 (414)
Q Consensus 53 v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 131 (414)
++.++.+++++++++|++||+ .|+.+|.++|.++|+++++.|++++++|++++++|+|||..+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999 8999999999999999999999999999999999999999998743566566655 2
Q ss_pred HHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHH-
Q 015020 132 YYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAK- 210 (414)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~- 210 (414)
++.. .+.. ...+...+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ~~~~--~~~~-g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKD--EQTC-GILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTT--CCCS-EEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhh--cccc-ccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 3321 1111 11222234557889999999999999999999999999999999999999999999999998888775
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHH
Q 015020 211 ---LAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTA 287 (414)
Q Consensus 211 ---~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a 287 (414)
++|+|+|++|+++|.+.+.++.|++||+|+.|+||||+.+++ .++ +++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~-~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAY-SSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHH-TSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHH-hcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998888999999999999999999998644 455 678999999999999999999999999
Q ss_pred HHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCE
Q 015020 288 ADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGAT 367 (414)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~ 367 (414)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ +||++++++++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999875 39999999999999999877677887
Q ss_pred EEeCCccc---CCCCCeEeeEE-------EeeCCCCCcccccccccceeeEEEEec
Q 015020 368 LLTGGKPI---GKKGYYIEPTI-------FTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 368 v~~gg~~~---~~~g~~~~Ptv-------l~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|++
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~ 349 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADN 349 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESS
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCC
Confidence 6 477542 12589999997 668899999876 89999999999975
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.7e-66 Score=517.09 Aligned_cols=322 Identities=16% Similarity=0.139 Sum_probs=257.2
Q ss_pred EEeecCCCCceEEEEeCCCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-------
Q 015020 39 FETIDPRTGEAIARIAEGDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA------- 111 (414)
Q Consensus 39 ~~v~~P~tg~~i~~v~~~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~------- 111 (414)
-.++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+
T Consensus 9 ~~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~ 86 (463)
T 2h5g_A 9 SGVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRL 86 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTS
T ss_pred CCCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccC
Confidence 35889999999999999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCchh----hhhhCcHHHHHHHHHHHHHHhhhhcCceeecc---CCccceeeecCCceEEEEcCCchhHHhhHHhHhhHh
Q 015020 112 GKLHS----WAKMGDIPGAANTLRYYAGAADKIHGEVLKMS---RALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPAL 184 (414)
Q Consensus 112 Gk~~~----~a~~~ev~~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~AL 184 (414)
|||+. ++.. |+..+++.+++++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||
T Consensus 87 Gk~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~AL 163 (463)
T 2h5g_A 87 AAPLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAI 163 (463)
T ss_dssp CHHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHH
T ss_pred CCchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHH
Confidence 79997 4554 999999999999988877666543321 3445689999999999999776 66666 7999999
Q ss_pred hcCCEEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHh
Q 015020 185 AAGCTMIVKPAEQTPLIALYFAHLAKLA----GVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAAT 260 (414)
Q Consensus 185 aaGN~vvlkps~~~~~~~~~l~~~l~~a----glP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~ 260 (414)
++||+||+|||+.+|+++.+|++++.++ | |+|++|+|+| +.++++.|+.||+||.|+||||+.+|+.|++.++
T Consensus 164 aaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa- 240 (463)
T 2h5g_A 164 ASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK- 240 (463)
T ss_dssp HHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS-
T ss_pred HcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC-
Confidence 9999999999999999999999999999 9 9999999999 6678999999999999999999999999998876
Q ss_pred CCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCC
Q 015020 261 SNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAV 340 (414)
Q Consensus 261 ~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~ 340 (414)
+||+++|||||||+||++|||++.|++.+++++|.| ||.|++++|||||++++|
T Consensus 241 --l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d----------------------- 294 (463)
T 2h5g_A 241 --GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR----------------------- 294 (463)
T ss_dssp --SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT-----------------------
T ss_pred --CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc-----------------------
Confidence 899999999999999999999999999999999999 999999999999999998
Q ss_pred CccccCCHHHHHHHHHHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 341 RQGPQVDKKQFDRILSYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 341 ~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
||+ + .+++++++++|++++.|+... ..|+|+ +++|++++||+||||++|++|++
T Consensus 295 --~p~-----~---~~~i~~~~~~Ga~v~~G~~~~-~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~ 348 (463)
T 2h5g_A 295 --TPL-----F---DQIIDMLRVEQVKIHAGPKFA-SYLTFS--------PSEVKSLRTEYGDLELCIEVVDN 348 (463)
T ss_dssp --SHH-----H---HHHHHHHHHTTCEEEECHHHH-C-----------------CCSSCCCCSSEEEEEEESS
T ss_pred --hHH-----H---HHHHHHHHhCCCEEEeCCccc-ccCccC--------CCCchHHhccccCceEEEEEeCC
Confidence 343 2 345888889999998555422 235443 57899999999999999999986
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=4.6e-64 Score=505.22 Aligned_cols=313 Identities=16% Similarity=0.148 Sum_probs=262.7
Q ss_pred HHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhhCcHHH-HHHHHHHHH
Q 015020 60 DVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKMGDIPG-AANTLRYYA 134 (414)
Q Consensus 60 ~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~~ 134 (414)
.+++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. ++..+++++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 58899999999999 8999999999999999999999999999999999999998 7875237888 888889888
Q ss_pred HHhhhhc------Cceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHH
Q 015020 135 GAADKIH------GEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYF 205 (414)
Q Consensus 135 ~~~~~~~------~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l 205 (414)
+.++... +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8776654 443331 12445789999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 206 AHLAK----L----AGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 206 ~~~l~----~----aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
++++. + +|+|+|++|+|+ ++.++++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6667899999999999999999999999999865 599999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRI 354 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~ 354 (414)
|++|||++.|++.+++++|.|+| .|++++|||||+++ |+|+++|.++++++++ |+|.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 87642
Q ss_pred HHH-HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 355 LSY-IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 355 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
.++ |++++ ++++||. | +.||+| ++++|++++||+||||++|++|++
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~ 353 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTS 353 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCS
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCC
Confidence 345 66665 3667775 4 689987 789999999999999999999986
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=7.7e-61 Score=479.83 Aligned_cols=306 Identities=21% Similarity=0.218 Sum_probs=255.8
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCchh----hhhh-------CcHHHH
Q 015020 58 KEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLHS----WAKM-------GDIPGA 126 (414)
Q Consensus 58 ~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~----~a~~-------~ev~~~ 126 (414)
.+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+.. +++. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5789999999999999 89999999999999999999999999999999999999853 4431 278889
Q ss_pred HHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHHH
Q 015020 127 ANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIAL 203 (414)
Q Consensus 127 ~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~ 203 (414)
++.+++++.+++.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887643 333332 23456789999999999999999 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEE
Q 015020 204 YFAHLA----KLAGVPDGVLNVVPGFGP-TAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLI 278 (414)
Q Consensus 204 ~l~~~l----~~aglP~g~~~~v~g~~~-~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV 278 (414)
+|++++ .++|+|+|++|+++|.+. .+++.|..||+||.|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 789999999999998654 5788899999999999999999999998765 5999999999999999
Q ss_pred cCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhcccc---CCCCCCCCCccccCCHHHHHHHH
Q 015020 279 FDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVV---GDPFDPAVRQGPQVDKKQFDRIL 355 (414)
Q Consensus 279 ~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~ 355 (414)
++|||++.|++.+++++|.|+| .|++++|||||++++|+|+++|+++++++++ |+|. ..
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~-----------------~~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDAD-----------------AR 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHH-----------------HH
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHH-----------------HH
Confidence 9999999999999999999999 9999999999999999999999999999988 7652 13
Q ss_pred HHHHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 356 SYIEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 356 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
++|+++. .| ++ ++++|++++||+||||++|++|++
T Consensus 318 ~~i~~a~---------------~G------~~--~~~~~~~~~eEiFGPVl~v~~~~~ 352 (444)
T 4ghk_A 318 AVLEAAG---------------VG------PL--VDATDEDWRTEYLAPVLAIKIVDG 352 (444)
T ss_dssp HHHHHTT---------------CC------CC--EECCSGGGTCC---CEEEEEEESS
T ss_pred HHHHhcc---------------cC------cc--cCCCchhhhccccCceEEEEEeCC
Confidence 5666542 12 12 356899999999999999999975
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=7.5e-61 Score=477.67 Aligned_cols=305 Identities=18% Similarity=0.203 Sum_probs=266.2
Q ss_pred CHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCch----hhhhh-------CcHHH
Q 015020 57 DKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDAGKLH----SWAKM-------GDIPG 125 (414)
Q Consensus 57 ~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~----~~a~~-------~ev~~ 125 (414)
..+++++++++|++||+ .|+.+|..+|.++|+++++.|++++++|++++++|+||+. .++.. .|+..
T Consensus 12 ~~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~ 89 (427)
T 1o20_A 12 HMDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDE 89 (427)
T ss_dssp --CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHH
Confidence 34689999999999999 8999999999999999999999999999999999999986 45431 38999
Q ss_pred HHHHHHHHHHHhhhhcCceeec---cCCccceeeecCCceEEEEcCCchhHHhhHHhHhhHhhcCCEEEEecCCCChHHH
Q 015020 126 AANTLRYYAGAADKIHGEVLKM---SRALQGYTLREPIGVVGHIIPWNFPTTMFFMKVSPALAAGCTMIVKPAEQTPLIA 202 (414)
Q Consensus 126 ~~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~ 202 (414)
+++.+++++.+.+. .+...+. ..+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++
T Consensus 90 ~~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~ 166 (427)
T 1o20_A 90 MIKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSN 166 (427)
T ss_dssp HHHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHH
T ss_pred HHHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHH
Confidence 99999999988765 3443332 12445688999999999999986 468899999999999999999999999999
Q ss_pred HHHHHHHH----HcCCCCCcEEEEeCC-chhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceE
Q 015020 203 LYFAHLAK----LAGVPDGVLNVVPGF-GPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLL 277 (414)
Q Consensus 203 ~~l~~~l~----~aglP~g~~~~v~g~-~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~i 277 (414)
.+|++++. ++|+|+|++|+|+|. ..+.++.|..||++|.|+||||+.+|+.|++.+ +||+++|||||||+|
T Consensus 167 ~~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~i 242 (427)
T 1o20_A 167 KAIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIF 242 (427)
T ss_dssp HHHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEE
Confidence 99999998 689999999999984 456788999999999999999999999999876 499999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHH
Q 015020 278 IFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSY 357 (414)
Q Consensus 278 V~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~ 357 (414)
|++|||+|.|++.+++++|.|+| .|++++|||||++++|+|+++|++++++++++
T Consensus 243 V~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------ 297 (427)
T 1o20_A 243 VDESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------ 297 (427)
T ss_dssp ECTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE------------------------
T ss_pred EeCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe------------------------
Confidence 99999999999999999999999 99999999999999999999999999988652
Q ss_pred HHHHHHcCCEEEeCCcccCCCCCeEeeEEEeeCCCCCcccccccccceeeEEEEec
Q 015020 358 IEHGKREGATLLTGGKPIGKKGYYIEPTIFTNVTEDMLIAKNEIFGPVMALMKFKI 413 (414)
Q Consensus 358 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~~E~fgPv~~v~~~~~ 413 (414)
+.||.+. .| |+ ||| ++++|++++||+||||++|++|++
T Consensus 298 -----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~ 335 (427)
T 1o20_A 298 -----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKN 335 (427)
T ss_dssp -----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESS
T ss_pred -----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECC
Confidence 2233221 13 33 885 345789999999999999999986
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=90.58 E-value=13 Score=35.83 Aligned_cols=239 Identities=16% Similarity=0.160 Sum_probs=124.9
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh-CCch------hhhhhCcHH---------------HHHHHHHHH
Q 015020 76 PWPRFSGAERRGIMLKFADLIEEHAEVLAVLEALDA-GKLH------SWAKMGDIP---------------GAANTLRYY 133 (414)
Q Consensus 76 ~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~~e~-Gk~~------~~a~~~ev~---------------~~~~~l~~~ 133 (414)
.|+..+..+-.+..+.+.+.++++.|+-+...++.. |... ..... |+. .+.+.++.|
T Consensus 26 ~r~~~~~~~v~~~V~~Ii~~Vr~~GD~Al~~yt~kFD~~~~~~~~~l~vs~~-ei~~A~~~l~~~~~~ai~~A~~~I~~f 104 (423)
T 4gic_A 26 AWSESEDTDIHQRVTEIIGCIRRDGDAALVELTARFDHFVVDTAAALELPRD-VLEAAWQALPAEQAKALREAAERIRAY 104 (423)
T ss_dssp CCC---CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCCSSGGGGEECHH-HHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred cccccChHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCCCCCccceecCHH-HHHHHHhhCCHHHHHHHHHHHHHHHHH
Confidence 344555555556667777777777666554444432 2111 11111 222 223333333
Q ss_pred HHHhhhhcCceeeccCCccceeeecCCceEEEEcCCc---hhHHhhHHhHhhHhhcCCE-EEE-ecCCCChHHHHHHHHH
Q 015020 134 AGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPWN---FPTTMFFMKVSPALAAGCT-MIV-KPAEQTPLIALYFAHL 208 (414)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~l~~ALaaGN~-vvl-kps~~~~~~~~~l~~~ 208 (414)
.+... .........+|.....++.|+--|++..|.- ||-.. +...+||-.+|+. +|+ -|++. -.....+.-+
T Consensus 105 h~~Q~-~~~~~~~~~~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsv-LM~aiPAkVAGV~~Iv~~tPp~~-G~i~p~iL~A 181 (423)
T 4gic_A 105 AERQK-LDSWDYREADGTLLGQKITPLDRVGLYVPGGKAAYPSSV-LMNAVPAKVAGVPELIMAVPAPR-GELNALVLAA 181 (423)
T ss_dssp HHHHC-CCCEEEECTTSCEEEEEEEECSEEEEECCCSTTCCHHHH-HHHHHHHHHHTCSEEEEECCCGG-GCCCHHHHHH
T ss_pred HHhcc-cCCcccccCCCCEEEEEEEEecceeEEeeCCCCchhhHH-HHhhccHHHhCCCeEEEecCCCC-CCccHHHHHH
Confidence 32111 1111122345666778899999999999943 66444 5557899999986 333 34332 1122223333
Q ss_pred HHHcCCCCCcEEEEeCCchhHHHHhhh----CCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCce-EEcCCCC
Q 015020 209 AKLAGVPDGVLNVVPGFGPTAGAAIAS----HMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPL-LIFDDVD 283 (414)
Q Consensus 209 l~~aglP~g~~~~v~g~~~~~~~~l~~----~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~-iV~~dad 283 (414)
...+|+. .+..-.|.+.-.+|.- -|.||.|+=.|..-+... +..- .+..-+=+.-|-.--+ |-++++|
T Consensus 182 A~l~Gv~----eIy~vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v-~g~VgIDm~AGPSEilViAD~~a~ 254 (423)
T 4gic_A 182 AYISGVD----RVFRIGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLV-FGQVGIDMVAGPSEILVISDGRTD 254 (423)
T ss_dssp HHHHTCC----EEECCCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHH-BTTBEECCCCCCCEEEEEECSCSC
T ss_pred HHhcCCc----EEEEcCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHh-cCCcCcccccccceEEEEeCCCCC
Confidence 4556653 2333335454445543 678999999999877543 2222 1211122222323333 3345689
Q ss_pred HHHHHHHHHHHHhccCCCccccCCceEeecc--hHHHHHHHHHHHHhcc
Q 015020 284 VNTAADMALLGILFNKGEICVASSRVYVQEG--IYDEFEKKLVEKAKAW 330 (414)
Q Consensus 284 l~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~--i~~~f~~~l~~~~~~~ 330 (414)
.+..+..++.-+=+... .+.++|..+ +.+++.+.+.+.+..+
T Consensus 255 p~~vAaDLlsQAEHd~~-----a~~iLvT~s~~la~~V~~~i~~~l~~l 298 (423)
T 4gic_A 255 PDWIAMDLFSQAEHDED-----AQAILISPDAAHLEAVQASIERLLPGM 298 (423)
T ss_dssp HHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHhhccCCC-----CeEEEEeCcHHHHHHHHHHHHHHHhhC
Confidence 99999888887766543 234566544 4455555555555443
No 54
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=67.52 E-value=25 Score=29.60 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=33.2
Q ss_pred HhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015020 183 ALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (414)
Q Consensus 183 ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~ 226 (414)
.-.+||-+|+|..|-. +..++.++...++|++++-.+.|++
T Consensus 113 v~~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGDD 153 (180)
T 3v4g_A 113 VDHNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGDD 153 (180)
T ss_dssp EEECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECSS
T ss_pred EeecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecCC
Confidence 3457999999987765 6778888888889998999998854
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=54.21 E-value=13 Score=32.64 Aligned_cols=69 Identities=10% Similarity=0.141 Sum_probs=47.4
Q ss_pred HHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHH
Q 015020 177 FMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQ 253 (414)
Q Consensus 177 ~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~ 253 (414)
+..++..+.+||-||++.+. +.....+..+|... +|.|++++++.+. + + ...-..+.+.++.+...-..
T Consensus 21 F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~l-LP~~c~~l~~~s~-~---Y-~~~~~cnilgls~~v~iP~~ 89 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTM-LPVGCVRIIPYSS-Q---Y-EEAYRCNFLGLSPHVQIPPH 89 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGG-SCGGGCCEEEEES-S---C-CCTTTCSEEEECTTCCCCHH
T ss_pred HHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHh-CCHHHHhccccch-h---h-cchhheeeecCCCCcccCcc
Confidence 45567788899999999876 45556667777787 9999999986522 1 1 22334566777766555433
No 56
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=53.99 E-value=37 Score=22.49 Aligned_cols=47 Identities=15% Similarity=0.247 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHhhcccCCCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 015020 56 GDKEDVDLAVKAARQAFDHGPWPRFSGAERRGIMLKFADLIEEHAEVLAVLEA 108 (414)
Q Consensus 56 ~~~~~v~~av~~A~~a~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l~~~~~ 108 (414)
.+.++.+..+++.-+|-..|.|.+. .+|+-+..-|.+-++.++..+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 3566777777777777776789874 6788888888888888887653
No 57
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=49.57 E-value=28 Score=28.48 Aligned_cols=114 Identities=17% Similarity=0.128 Sum_probs=74.6
Q ss_pred ceEEEEcCCc-hhHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHhhhCC
Q 015020 161 GVVGHIIPWN-FPTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAGAAIASHM 237 (414)
Q Consensus 161 Gvv~~i~p~n-~P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~-aglP~g~~~~v~g-~~~~~~~~l~~~~ 237 (414)
|.++++..-+ =+-...+.+-...+..|..++-- .-|+ +.|.+ .|+|-..++=++. ..+.+++.+ .+.
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I-~~g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALI-SEG 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHH-HTT
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHH-HCC
Confidence 7666555544 35555666666677789987753 2344 44555 7999666653332 233455555 566
Q ss_pred CcCEEEEecC-------HHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCC
Q 015020 238 DIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (414)
Q Consensus 238 ~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (414)
.|+.|.||-+ ..-+..|.+.|. .+..|+...+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~-~~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLAT-VWNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHH-HTTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 9999999876 456788999888 6768877643 456777777777764
No 58
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=48.71 E-value=1.2e+02 Score=25.25 Aligned_cols=42 Identities=19% Similarity=0.303 Sum_probs=32.0
Q ss_pred hhHhhcCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015020 181 SPALAAGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (414)
Q Consensus 181 ~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~ 226 (414)
...=.+||-+|+|..|-. +..++.++...++| +++-.|.|++
T Consensus 106 ~sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGDD 147 (170)
T 3lap_A 106 VSTDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGDD 147 (170)
T ss_dssp CEEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECSS
T ss_pred eEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecCC
Confidence 334457999999987755 67788888888766 7888888854
No 59
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=47.12 E-value=2e+02 Score=27.61 Aligned_cols=191 Identities=19% Similarity=0.228 Sum_probs=105.0
Q ss_pred HHHHHHHHHHHHHHhhhhcCceeeccCCccceeeecCCceEEEEcCC---chhHHhhHHhHhhHhhcCCEEEE--ecCCC
Q 015020 123 IPGAANTLRYYAGAADKIHGEVLKMSRALQGYTLREPIGVVGHIIPW---NFPTTMFFMKVSPALAAGCTMIV--KPAEQ 197 (414)
Q Consensus 123 v~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~---n~P~~~~~~~l~~ALaaGN~vvl--kps~~ 197 (414)
+..+.+.++.|.+.-.. .........|.....++.|+.-|++..|+ -||-. ++...+||-.+|+.=|+ -|+..
T Consensus 88 i~~A~~nI~~fH~~Q~~-~~~~~~~~~Gv~~gq~~~Pi~rvGlYVPGG~a~ypSs-vLM~aiPAkVAGV~~Iv~~tPp~i 165 (434)
T 1kae_A 88 MAVAVKNIETFHTAQKL-PPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFST-VLMLATPASIAGCKKVVLCSPPPI 165 (434)
T ss_dssp HHHHHHHHHHHHHTTCC-CCEEEEEETTEEEEEEEEECSEEEEECCCSSSCCTHH-HHHHHHHHHHHTCSEEEEEECSSC
T ss_pred HHHHHHHHHHHHHHhcC-CCceEEecCCcEEEEEEeehheEEEEecCCCCCchhH-HHHhhccHhhcCCCeEEEECCCCC
Confidence 44455555655432211 11122223466677889999999999995 35543 35557899999987554 34322
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh----hCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeec-CC
Q 015020 198 TPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA----SHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLEL-GG 272 (414)
Q Consensus 198 ~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~----~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~el-gG 272 (414)
.|. +.-+...+|+. .+..-.|.+.-.+|. +-|+||.|+=.|..-+...= +...+. ...|-..+ -|
T Consensus 166 ~p~----iL~AA~l~Gv~----eIy~vGGAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AK-r~Vs~~-~G~VgIDm~AG 235 (434)
T 1kae_A 166 ADE----ILYAAQLCGVQ----DVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK-RQVSQR-LDGAAIDMPAG 235 (434)
T ss_dssp CHH----HHHHHHHTTCC----EEEECCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHHHC-TTSCEESCCCC
T ss_pred CHH----HHHHHHHcCCC----EEeecccHHHHHHHHcCCCCCCCccEEECCCcHHHHHHH-HHhHhh-cCccccCCCCC
Confidence 332 22334556653 233323444444443 25889999999987764431 111101 11122211 23
Q ss_pred CCc--eEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeec--chHHHHHHHHHHHHhcc
Q 015020 273 KSP--LLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQE--GIYDEFEKKLVEKAKAW 330 (414)
Q Consensus 273 ~~~--~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~--~i~~~f~~~l~~~~~~~ 330 (414)
.+= +|-+++||.+..+..++.-+=+... .+.++|.. .+.++..+.+.+.+..+
T Consensus 236 PSEilViAD~tAnp~~vAaDLLsQAEHd~~-----a~aiLvT~s~~la~~V~~ev~~ql~~l 292 (434)
T 1kae_A 236 PSEVLVIADSGATPDFVASDLLSQAEHGPD-----SQVILLTPAADMARRVAEAVERQLAEL 292 (434)
T ss_dssp CCEEEEEECTTSCHHHHHHHHHHHHTTCTT-----CEEEEEESCHHHHHHHHHHHHHHHTTC
T ss_pred CceEEEEeCCCCCHHHHHHHHHHHhccCCC-----CcEEEEECCHHHHHHHHHHHHHHHHhC
Confidence 332 3345679999999888877766532 33456644 45566666666555544
No 60
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=43.84 E-value=20 Score=30.20 Aligned_cols=120 Identities=15% Similarity=0.061 Sum_probs=77.7
Q ss_pred eeecCC-ceEEEEcCCch-hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHH
Q 015020 155 TLREPI-GVVGHIIPWNF-PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVPG-FGPTAG 230 (414)
Q Consensus 155 ~~~~P~-Gvv~~i~p~n~-P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~-aglP~g~~~~v~g-~~~~~~ 230 (414)
...-|. |.++++..-+- +-...+.+-...+..|..++- +.-|+.+ |.+ .|+|-..++=++. ..+.++
T Consensus 21 ~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa~~----L~e~~Gl~v~~v~k~~eGG~pqI~ 91 (178)
T 1vmd_A 21 KIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTGAL----LQEKLGLKVHRLKSGPLGGDQQIG 91 (178)
T ss_dssp EEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHHHH----HHHHHCCCCEECSCGGGTHHHHHH
T ss_pred eeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHHHH----HHHHhCceeEEEeecCCCCCchHH
Confidence 334444 76666655443 666666666677778998775 3444444 445 7999655543332 233455
Q ss_pred HHhhhCCCcCEEEEecC-------HHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCC
Q 015020 231 AAIASHMDIDKVSFTGS-------TDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKG 300 (414)
Q Consensus 231 ~~l~~~~~v~~v~ftGs-------~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~G 300 (414)
+.+ .+..|+.|.||-+ ..-+..|.+.|. .+..|+...+ ..++.++.+.+++..
T Consensus 92 d~I-~~geIdlVInt~dPl~~~~h~~D~~~IRR~A~-~~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 92 AMI-AEGKIDVLIFFWDPLEPQAHDVDVKALIRIAT-VYNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHH-HTTSCCEEEEECCSSSCCTTSCCHHHHHHHHH-HTTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHH-HCCCccEEEEccCccCCCcccccHHHHHHHHH-HcCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 544 5669999999876 235688998888 6768887643 557788888887764
No 61
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=41.02 E-value=22 Score=28.68 Aligned_cols=63 Identities=13% Similarity=0.034 Sum_probs=44.1
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHhhhCCCcCEEEEecCH-----HHHHHHHHHHHhCCCcceeeec
Q 015020 206 AHLAKLAGVPDGVLNVVPGF-G----PTAGAAIASHMDIDKVSFTGST-----DVGRQVMQAAATSNLKPVSLEL 270 (414)
Q Consensus 206 ~~~l~~aglP~g~~~~v~g~-~----~~~~~~l~~~~~v~~v~ftGs~-----~~g~~i~~~~~~~~~~~~~~el 270 (414)
++.|++.|+|-..++-++.+ . +.+.+.+. +..|+.|.+|-+. .-+..|.+.+. .+..|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~-~g~i~lVInt~~~~~~~~~d~~~iRR~Av-~~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIR-DGSIDLVINLPNNNTKFVHDNYVIRRTAV-DSGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHH-TTSCCEEEECCCCCGGGHHHHHHHHHHHH-HTTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHH-CCCceEEEECCCCCCcCCccHHHHHHHHH-HhCCCeEcCH
Confidence 44567899998777766542 2 45666554 5689999998655 36778888888 6778887654
No 62
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=39.27 E-value=7.7 Score=31.12 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=53.2
Q ss_pred hHHhhHHhHhhHhhcCCEEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHhhhCCCcCEEEEecC--
Q 015020 172 PTTMFFMKVSPALAAGCTMIVKPAEQTPLIALYFAHLAKL-AGVPDGVLNVVP-GFGPTAGAAIASHMDIDKVSFTGS-- 247 (414)
Q Consensus 172 P~~~~~~~l~~ALaaGN~vvlkps~~~~~~~~~l~~~l~~-aglP~g~~~~v~-g~~~~~~~~l~~~~~v~~v~ftGs-- 247 (414)
+-...+.+-...+..|..++- +.-|+. .|.+ .|++-..++=++ +.++.+++.+ .+..|+.|.||-+
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa~----~L~e~~Gl~v~~v~k~~~eG~p~I~d~I-~~geIdlVInt~~pl 85 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTGR----RIEEATGLTVEKLLSGPLGGDQQMGARV-AEGRILAVIFFRDPL 85 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHHH----HHHHHHCCCCEECSCGGGTHHHHHHHHH-HTTCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHHH----HHHHhhCceEEEEEecCCCCcchHHHHH-HCCCccEEEEccCcc
Confidence 333444444455556776654 334444 4445 799977666555 4344555555 5668999999977
Q ss_pred -----HHHHHHHHHHHHhCCCcceeee
Q 015020 248 -----TDVGRQVMQAAATSNLKPVSLE 269 (414)
Q Consensus 248 -----~~~g~~i~~~~~~~~~~~~~~e 269 (414)
..-+..|.+.+. .+..|+...
T Consensus 86 ~~~~h~~D~~~IrR~A~-~~~IP~~T~ 111 (134)
T 2xw6_A 86 TAQPHEPDVQALLRVCD-VHGVPLATN 111 (134)
T ss_dssp TCCTTSCCSHHHHHHHH-HHTCCEECS
T ss_pred cCCCccchHHHHHHHHH-HcCCCeEcC
Confidence 234577888877 555676654
No 63
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=32.83 E-value=91 Score=21.60 Aligned_cols=56 Identities=9% Similarity=0.111 Sum_probs=39.1
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 186 aGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
+||-+|+|..|-. +..++.++.+.++|. ++-.+.|++. .....-+...++.+.+..
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGDDT-------------Ilvi~r~~~~a~~l~~~i 67 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGDDT-------------CLIICRTPKDAKKVSNQL 67 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECSSE-------------EEEEESSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeCCE-------------EEEEECCHHHHHHHHHHH
Confidence 6999999987655 677888888887765 8888888541 234445556666665544
No 64
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=31.86 E-value=31 Score=27.34 Aligned_cols=43 Identities=14% Similarity=0.053 Sum_probs=30.3
Q ss_pred CcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHHH
Q 015020 217 GVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAAA 259 (414)
Q Consensus 217 g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~~ 259 (414)
|.+.+++|+..+........+++.+|.+||+......+.+.+.
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~ 95 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAE 95 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHH
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHH
Confidence 5688887866554433333257899999999887777777666
No 65
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=31.76 E-value=97 Score=21.94 Aligned_cols=37 Identities=22% Similarity=0.399 Sum_probs=29.3
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015020 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (414)
Q Consensus 186 aGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~ 226 (414)
++|-+|+|..|-. +..++.++.+.++|. ++-.+.|++
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDD 56 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGDD 56 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCC
Confidence 7999999987655 677888888886765 888888854
No 66
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=30.71 E-value=68 Score=22.77 Aligned_cols=38 Identities=18% Similarity=0.364 Sum_probs=30.8
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 015020 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFG 226 (414)
Q Consensus 186 aGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~ 226 (414)
++|-+|+|..|-. +..++.++.+.+.+++++-.+.|++
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGDD 51 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGDD 51 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECSS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecCC
Confidence 6899999987654 6778888877778888999998854
No 67
>2v9v_A Selenocysteine-specific elongation factor; transcription, protein conformational change, transcription elongation factor SELB; 1.10A {Moorella thermoacetica} SCOP: a.4.5.35 a.4.5.35
Probab=30.05 E-value=59 Score=25.29 Aligned_cols=86 Identities=10% Similarity=0.111 Sum_probs=50.1
Q ss_pred HHHHHHHHhccCCCcccc--CCceEeecchHHHHHHHHHHHHhccccCCCCCCCCCccccCCH----HHHHHHHHHHHHH
Q 015020 288 ADMALLGILFNKGEICVA--SSRVYVQEGIYDEFEKKLVEKAKAWVVGDPFDPAVRQGPQVDK----KQFDRILSYIEHG 361 (414)
Q Consensus 288 ~~~i~~~~~~~~GQ~C~a--~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~----~~~~~~~~~i~~a 361 (414)
+...+.......+-.|.. ....|++.+.++++.+.+.+.+..+.--+|+.++..-.-+.+. -...-+..+++..
T Consensus 34 l~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~L~~yH~~~P~~~G~~keeLr~~~~~~~~~~~~~~ll~~l 113 (135)
T 2v9v_A 34 TRKLLQSMAAAGQVTLLRVENDLYAISTERYQAWWQAVTRALEEFHSRYPLRPGLAREELRSRYFSRLPARVYQALLEEW 113 (135)
T ss_dssp HHHHHHHHHHTTCEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHHCTTSSCEEHHHHHHHHCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEEecCCCeEEecHHHHHHHHHHHHHHHHHHHHhCCCccCCCHHHHHHHhcccCCHHHHHHHHHHH
Confidence 334444444444444443 2344899999999999999999986555565544222111111 0112345677888
Q ss_pred HHcCCEEEeCCc
Q 015020 362 KREGATLLTGGK 373 (414)
Q Consensus 362 ~~~Ga~v~~gg~ 373 (414)
+++|.-...|+.
T Consensus 114 ~~~g~l~~~~~~ 125 (135)
T 2v9v_A 114 SREGRLQLAANT 125 (135)
T ss_dssp HHTTSEEECSSE
T ss_pred HHCCCEEecCCE
Confidence 888866655543
No 68
>1use_A VAsp, vasodilator-stimulated phosphoprotein; signaling protein, null; 1.3A {Homo sapiens} SCOP: h.1.29.1 PDB: 1usd_A
Probab=29.72 E-value=69 Score=20.19 Aligned_cols=28 Identities=4% Similarity=0.048 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHhC
Q 015020 85 RRGIMLKFADLIEEHAEVLAVLEALDAG 112 (414)
Q Consensus 85 R~~~L~~~a~~l~~~~~~l~~~~~~e~G 112 (414)
..++|..+...|++.+++|++++..|..
T Consensus 13 KqEIL~E~RkElqK~K~EIIeAi~~El~ 40 (45)
T 1use_A 13 KQELLEEVKKELQKVKEEIIEAFVQELR 40 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3578888899999999999988876643
No 69
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=29.45 E-value=58 Score=26.75 Aligned_cols=52 Identities=17% Similarity=0.199 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhC--CCcCEEEEecCHHHHH
Q 015020 200 LIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (414)
Q Consensus 200 ~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (414)
.....|.+.+.+.|...-...+++.+ ..+.+.|.+. ...|.|..||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 35577888889999876667788776 6666666442 3689999999887543
No 70
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=29.06 E-value=36 Score=28.15 Aligned_cols=53 Identities=21% Similarity=0.171 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhh---CCCcCEEEEecCHHHH
Q 015020 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIAS---HMDIDKVSFTGSTDVG 251 (414)
Q Consensus 199 ~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~---~~~v~~v~ftGs~~~g 251 (414)
-.....|.+.+.+.|+..-...+++.+...+.+.|.+ ..+.|.|..||++..+
T Consensus 30 Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 30 DKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp CHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred cChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 3456778888999998655566676554455555533 1268999999998654
No 71
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=28.69 E-value=68 Score=26.50 Aligned_cols=53 Identities=19% Similarity=0.016 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhh---hCCCcCEEEEecCHHHH
Q 015020 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIA---SHMDIDKVSFTGSTDVG 251 (414)
Q Consensus 199 ~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~---~~~~v~~v~ftGs~~~g 251 (414)
-..+.+|.+.|.+.|+.--...+++.+...+..++. ...+.|.|..||+...+
T Consensus 39 D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 39 DESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred cchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 456778999999999866556666654444555543 34568999999998644
No 72
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=28.52 E-value=88 Score=22.41 Aligned_cols=56 Identities=11% Similarity=0.082 Sum_probs=38.8
Q ss_pred cCCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCEEEEecCHHHHHHHHHHH
Q 015020 186 AGCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDKVSFTGSTDVGRQVMQAA 258 (414)
Q Consensus 186 aGN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~v~ftGs~~~g~~i~~~~ 258 (414)
+||-+|+|..|-. +..++.++.+.++|. ++-.+.|++. .....-+...+..+.+..
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGDDT-------------Ilvi~r~~~~a~~l~~~l 79 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGDDT-------------ILIICRTPEDTEGVKNRL 79 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECSSE-------------EEEECSSHHHHHHHHHHH
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecCCE-------------EEEEECCHHHHHHHHHHH
Confidence 7999999987655 677888888886665 8888888541 233444555566665544
No 73
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=24.37 E-value=62 Score=27.29 Aligned_cols=54 Identities=19% Similarity=0.055 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhC--CCcCEEEEecCHHHHH
Q 015020 199 PLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASH--MDIDKVSFTGSTDVGR 252 (414)
Q Consensus 199 ~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~--~~v~~v~ftGs~~~g~ 252 (414)
-.....|.+.+.+.|...-...+++.+...+.+.|.+. ...|.|..||++..+.
T Consensus 48 Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 48 DHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred CcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 34567788889999876666667776555555665442 5689999999987653
No 74
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=24.32 E-value=88 Score=23.71 Aligned_cols=104 Identities=16% Similarity=0.263 Sum_probs=66.4
Q ss_pred EEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHH
Q 015020 241 KVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFE 320 (414)
Q Consensus 241 ~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~ 320 (414)
.|.|...+..-+.|.+... +.+.++ ++...|-|-..--+.+ .-|-..|-.. -- .++ .+.|.
T Consensus 5 fvvfssdpeilkeivreik-rqgvrv---------vllysdqdekrrrerl--eefekqgvdv-----rt-ved-kedfr 65 (162)
T 2l82_A 5 FVVFSSDPEILKEIVREIK-RQGVRV---------VLLYSDQDEKRRRERL--EEFEKQGVDV-----RT-VED-KEDFR 65 (162)
T ss_dssp EEEEESCHHHHHHHHHHHH-HTTCEE---------EEEECCSCHHHHHHHH--HHHHTTTCEE-----EE-CCS-HHHHH
T ss_pred EEEecCCHHHHHHHHHHHH-hCCeEE---------EEEecCchHHHHHHHH--HHHHHcCCce-----ee-ecc-HHHHH
Confidence 4677777887777777766 333444 3455666655443333 3355555221 11 222 57888
Q ss_pred HHHHHHHhccccCCCCCCCCCccccCCHHHHHHHHHHHHHHHHcCCEEEe
Q 015020 321 KKLVEKAKAWVVGDPFDPAVRQGPQVDKKQFDRILSYIEHGKREGATLLT 370 (414)
Q Consensus 321 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~v~~ 370 (414)
+.+++.-.++ |..++--+++....+-++++|++|+..|.++..
T Consensus 66 enireiwery-------pqldvvvivttddkewikdfieeakergvevfv 108 (162)
T 2l82_A 66 ENIREIWERY-------PQLDVVVIVTTDDKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp HHHHHHHHHC-------TTCCEEEEEECCCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhC-------CCCcEEEEEecCcHHHHHHHHHHHHhcCcEEEE
Confidence 8888877765 334555566666779999999999999987753
No 75
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=20.66 E-value=4.9e+02 Score=23.79 Aligned_cols=87 Identities=11% Similarity=-0.000 Sum_probs=53.1
Q ss_pred HHhhhCCCcCEEEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceE
Q 015020 231 AAIASHMDIDKVSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVY 310 (414)
Q Consensus 231 ~~l~~~~~v~~v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~ 310 (414)
+.|..++++|.|+....+..-..+...+. +..|.|++|=. + ..+++. ++.++..+-. .|. .+.
T Consensus 81 ~~ll~~~~vD~V~I~tp~~~H~~~~~~al-~aGkhVl~EKP----l----a~~~~e-a~~l~~~a~~-~g~------~l~ 143 (361)
T 3u3x_A 81 EEILEDENIGLIVSAAVSSERAELAIRAM-QHGKDVLVDKP----G----MTSFDQ-LAKLRRVQAE-TGR------IFS 143 (361)
T ss_dssp HHHHTCTTCCEEEECCCHHHHHHHHHHHH-HTTCEEEEESC----S----CSSHHH-HHHHHHHHHT-TCC------CEE
T ss_pred HHHhcCCCCCEEEEeCChHHHHHHHHHHH-HCCCeEEEeCC----C----CCCHHH-HHHHHHHHHH-cCC------EEE
Confidence 45667889999999999888888877777 45577766631 1 224555 3444443322 332 233
Q ss_pred e-ecchHH-HHHHHHHHHHhccccCC
Q 015020 311 V-QEGIYD-EFEKKLVEKAKAWVVGD 334 (414)
Q Consensus 311 V-~~~i~~-~f~~~l~~~~~~~~~g~ 334 (414)
| +...++ .....+++.+.+=++|+
T Consensus 144 v~~~~R~~~p~~~~~k~~i~~g~iG~ 169 (361)
T 3u3x_A 144 ILYSEHFESPATVKAGELVAAGAIGE 169 (361)
T ss_dssp EECHHHHTCHHHHHHHHHHHTTTTSS
T ss_pred EechHhhCCHHHHHHHHHHHcCCCCC
Confidence 3 334464 66778888776544554
No 76
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=20.00 E-value=5.6e+02 Score=24.21 Aligned_cols=148 Identities=14% Similarity=0.031 Sum_probs=77.8
Q ss_pred EEEEcCCchhHHhhHHhHhhHhhc-CCEEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHhhhCCCcCE
Q 015020 163 VGHIIPWNFPTTMFFMKVSPALAA-GCTMIVKPAEQTPLIALYFAHLAKLAGVPDGVLNVVPGFGPTAGAAIASHMDIDK 241 (414)
Q Consensus 163 v~~i~p~n~P~~~~~~~l~~ALaa-GN~vvlkps~~~~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~~~~v~~ 241 (414)
+++|+..+.-.. .+++|.. .+.-|+--....+..+..+++.+.+.|+|. ..+..+...+ .+.|++++++|.
T Consensus 23 vgiIG~G~~g~~-----h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~--~~~~~~~~~~-~~~ll~~~~vD~ 94 (444)
T 2ixa_A 23 IAFIAVGLRGQT-----HVENMARRDDVEIVAFADPDPYMVGRAQEILKKNGKKP--AKVFGNGNDD-YKNMLKDKNIDA 94 (444)
T ss_dssp EEEECCSHHHHH-----HHHHHHTCTTEEEEEEECSCHHHHHHHHHHHHHTTCCC--CEEECSSTTT-HHHHTTCTTCCE
T ss_pred EEEEecCHHHHH-----HHHHHHhCCCcEEEEEEeCCHHHHHHHHHHHHhcCCCC--CceeccCCCC-HHHHhcCCCCCE
Confidence 566666654221 2344433 344444444556666666776666667763 2333321222 355667789999
Q ss_pred EEEecCHHHHHHHHHHHHhCCCcceeeecCCCCceEEcCCCCHHHHHHHHHHHHhccCCCccccCCceEeecchHHHHHH
Q 015020 242 VSFTGSTDVGRQVMQAAATSNLKPVSLELGGKSPLLIFDDVDVNTAADMALLGILFNKGEICVASSRVYVQEGIYDEFEK 321 (414)
Q Consensus 242 v~ftGs~~~g~~i~~~~~~~~~~~~~~elgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~ 321 (414)
|+..-.+.....+...+. +..|.|.+|- |+ ..+++.+ +.++..+- ..|..|. +.+...+.....
T Consensus 95 V~i~tp~~~h~~~~~~al-~aGkhV~~EK----P~----a~~~~ea-~~l~~~a~-~~g~~~~-----v~~~~r~~p~~~ 158 (444)
T 2ixa_A 95 VFVSSPWEWHHEHGVAAM-KAGKIVGMEV----SG----AITLEEC-WDYVKVSE-QTGVPLM-----ALENVCYRRDVM 158 (444)
T ss_dssp EEECCCGGGHHHHHHHHH-HTTCEEEECC----CC----CSSHHHH-HHHHHHHH-HHCCCEE-----ECCGGGGCHHHH
T ss_pred EEEcCCcHHHHHHHHHHH-HCCCeEEEeC----CC----cCCHHHH-HHHHHHHH-HhCCeEE-----EEeccccCHHHH
Confidence 998887777666666666 4557777662 21 2355554 33333332 2243332 223334444556
Q ss_pred HHHHHHhccccCC
Q 015020 322 KLVEKAKAWVVGD 334 (414)
Q Consensus 322 ~l~~~~~~~~~g~ 334 (414)
.+++.+.+=.+|+
T Consensus 159 ~~~~~i~~G~iG~ 171 (444)
T 2ixa_A 159 AILNMVRKGMFGE 171 (444)
T ss_dssp HHHHHHHTTTTCS
T ss_pred HHHHHHHcCCCCC
Confidence 6666665433443
Done!