BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015021
(414 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225461677|ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Vitis vinifera]
gi|302142895|emb|CBI20190.3| unnamed protein product [Vitis vinifera]
Length = 457
Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 301/398 (75%), Positives = 353/398 (88%), Gaps = 5/398 (1%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWA-- 58
M++R +TTE+G IAC +LS+LGAGKE WLV +P+L+CALD ++ALANR +++ W+
Sbjct: 1 MARRVYTTELGCIACNELSELGAGKEAWLVENPSLICALDTDSLALANRSFVLVLGWSEN 60
Query: 59 -DPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLI 117
DP KIRP LS I +E ITA+EWLVF+E+R LAVGTS GY ++Y L DL+H+Q+I
Sbjct: 61 GDPYNSPVKIRPTLSQIETERITAVEWLVFDEIRVLAVGTSSGYLMIYSLGADLIHKQMI 120
Query: 118 HPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQ 177
+PGRILK RVRG++RDLTQ ++ EEVCVVMPGV+ARFDG+++Q MLQRWFQD++S FWD+
Sbjct: 121 NPGRILKFRVRGTKRDLTQGSSSEEVCVVMPGVIARFDGADLQSMLQRWFQDTHSQFWDE 180
Query: 178 KPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGE 237
KPK+RD ED E SY RLP+QLWNVSKYGPCADAAITG MPPPLME+QSSQRY+CAVTIG+
Sbjct: 181 KPKRRDQEDSEKSYGRLPYQLWNVSKYGPCADAAITGTMPPPLMELQSSQRYYCAVTIGD 240
Query: 238 DSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ-SPKKSEPKPQSFAR 296
D+VISAFRLSEDR+RSLVGAILSKVVPATFSTI+S SKMIWRSEQ SPK+SEPKPQ FAR
Sbjct: 241 DAVISAFRLSEDRNRSLVGAILSKVVPATFSTIASFSKMIWRSEQKSPKRSEPKPQPFAR 300
Query: 297 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
ASPLTCLKDHPRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDASC+F
Sbjct: 301 ASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCLFT 360
Query: 357 EMLVNKD-AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
EMLV+KD AA+SS+YY PVKSDYCLCLAIHAPRKGI+E
Sbjct: 361 EMLVSKDTAASSSSYYEPVKSDYCLCLAIHAPRKGIVE 398
>gi|255567076|ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative
[Ricinus communis]
gi|223536194|gb|EEF37847.1| rab3 gtpase-activating protein non-catalytic subunit, putative
[Ricinus communis]
Length = 484
Score = 614 bits (1583), Expect = e-173, Method: Compositional matrix adjust.
Identities = 295/395 (74%), Positives = 348/395 (88%), Gaps = 6/395 (1%)
Query: 2 SKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADPE 61
SKR+HTTE+G IAC +LSD+GAGKEGWLV++PNL CALD H+IA++NRY +I W D
Sbjct: 3 SKRSHTTELGCIACEELSDVGAGKEGWLVDNPNLKCALDTHSIAISNRYLILITGWDD-- 60
Query: 62 GLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGR 121
G KIRP+LSPI SE ITA+EWLVF+E+R +AVGTS GYFLVY L G L+H+Q+++PGR
Sbjct: 61 GPRLKIRPDLSPIESESITALEWLVFDEIRVVAVGTSCGYFLVYSLDGHLIHKQMVYPGR 120
Query: 122 ILKLRVRGSRRDLTQDTAE-EEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPK 180
ILK+RVRG+++DLTQ T+ EE+ +VMPGV+ARFDGS++Q MLQ W Q+ +S FWD+KP
Sbjct: 121 ILKIRVRGTKKDLTQQTSSSEEISIVMPGVIARFDGSDLQNMLQEWIQEKHSQFWDEKP- 179
Query: 181 QRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSV 240
RD++ L +Y+RLP+QLWNV+KYG CADAAITG+MPPPLMEVQSSQRY+CAVTIG+D+V
Sbjct: 180 NRDADGLGITYKRLPYQLWNVNKYGSCADAAITGVMPPPLMEVQSSQRYYCAVTIGDDAV 239
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ-SPKKSEPKPQSFARASP 299
ISA+RLSEDRS+SLVGAILSKVVPATFSTI+SLSKMIWRSE+ SPKKSE KPQSFA+ASP
Sbjct: 240 ISAYRLSEDRSKSLVGAILSKVVPATFSTIASLSKMIWRSEKASPKKSEAKPQSFAKASP 299
Query: 300 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML 359
LTCLKDHPRKGE+LTLSP G+LAAITDSLGRILLLDTQAL+VVRLWKGYRDASC FMEM
Sbjct: 300 LTCLKDHPRKGEKLTLSPGGTLAAITDSLGRILLLDTQALIVVRLWKGYRDASCFFMEMQ 359
Query: 360 VNKD-AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
V +D A SS+YY P KSDYCLCLAIHAPRKGIIE
Sbjct: 360 VKRDNAGASSSYYEPSKSDYCLCLAIHAPRKGIIE 394
>gi|297830038|ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
lyrata]
gi|297328741|gb|EFH59160.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
lyrata]
Length = 455
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 281/395 (71%), Positives = 338/395 (85%), Gaps = 2/395 (0%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADP 60
M+KR H TE+G IAC +LS+LGAGKEGWLVN+PNLL ALD H++ALANR+ +I+NW DP
Sbjct: 1 MAKRIHLTELGCIACEELSELGAGKEGWLVNNPNLLSALDSHSLALANRFLILIVNWGDP 60
Query: 61 EGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPG 120
+ KIRP+LSPI +E ITAIEWLVF+++R + GTS GY LVY + GDL+H+Q++HP
Sbjct: 61 DAPRLKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVAGDLIHKQMVHPS 120
Query: 121 RILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPK 180
RILK+RVRG+++DL Q+T+ EE+C+V+PG++ARFDGS IQ MLQ+WFQ+ NSNFWDQK +
Sbjct: 121 RILKIRVRGTKKDLMQETSSEEICIVLPGIIARFDGSNIQSMLQKWFQEKNSNFWDQKNR 180
Query: 181 QRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSV 240
+ D ED + Y+RLP+Q+WNV+K G C DA +TG+MPPPL+E+QSSQRY+CAVTIGED+V
Sbjct: 181 KGDVEDSGSLYQRLPYQIWNVNKNGVCVDATVTGVMPPPLLELQSSQRYYCAVTIGEDAV 240
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRS-EQSPK-KSEPKPQSFARAS 298
ISA+RLSEDR RSLVGAILSKVVPA STI+S SK+IWRS +QSPK K E K QSFARAS
Sbjct: 241 ISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQSPKRKPEAKTQSFARAS 300
Query: 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
LTC+KD+PRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM
Sbjct: 301 SLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 360
Query: 359 LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
L KD S + PVKSDYCLCLAIHAPRKGIIE
Sbjct: 361 LAKKDKGKSVIHTEPVKSDYCLCLAIHAPRKGIIE 395
>gi|449456579|ref|XP_004146026.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cucumis sativus]
Length = 456
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 283/398 (71%), Positives = 343/398 (86%), Gaps = 5/398 (1%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADP 60
M++RT TTE+G IAC DL+D GAGKEGWLV+ PNLLCALD H++ALANR +++ W+
Sbjct: 1 MARRTFTTELGCIACEDLADFGAGKEGWLVDSPNLLCALDSHSLALANRSIILVLGWSGS 60
Query: 61 EGLVAKIRP-ELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHP 119
+G KIRP +LSPI +EYI+A+EWLV +E++ + VGTS GYFL+Y L+GDL+ +Q+IHP
Sbjct: 61 DGYPLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLRGDLILKQMIHP 120
Query: 120 GRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKP 179
GRILK+RV GS+RDL+ ++ EEV + MPGV+AR +GS+IQ LQ+WFQ+S+S FWD K
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSIAMPGVIARIEGSDIQNTLQKWFQESSSQFWDPKS 180
Query: 180 KQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDS 239
QRD D ENS E+L +Q+WNVSKYG CADAAITG+MPPPLME+QSS+RYFCAVT+GED+
Sbjct: 181 HQRDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240
Query: 240 VISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE-QSPKKSEPKPQSFARAS 298
VISAFRLSED+SRSLVGAILSKVVPATFSTI+S SKMIWRSE ++ KK + K Q+FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300
Query: 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
PLTCLKDHPRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDA+C+FMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
Query: 359 LVNKDAATSSAY---YAPVKSDYCLCLAIHAPRKGIIE 393
LVN+D A+SS+ Y P K+DYCLCLAIHAPRKGI+E
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVE 398
>gi|15231948|ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
gi|8777474|dbj|BAA97054.1| unnamed protein product [Arabidopsis thaliana]
gi|63147384|gb|AAY34165.1| At3g14910 [Arabidopsis thaliana]
gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis thaliana]
gi|332642066|gb|AEE75587.1| uncharacterized protein [Arabidopsis thaliana]
Length = 455
Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust.
Identities = 279/395 (70%), Positives = 337/395 (85%), Gaps = 2/395 (0%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADP 60
M+KR H TE+G IAC +L++LGAGKEGWLVN+PNLL ALD H++ALANR+ +I+NW DP
Sbjct: 1 MAKRIHLTELGCIACEELTELGAGKEGWLVNNPNLLSALDSHSLALANRFLILIVNWGDP 60
Query: 61 EGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPG 120
+ KIRP+LSPI +E ITAIEWLVF+++R + GTS GY LVY + GDL+H+Q++H
Sbjct: 61 DAPRVKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVTGDLIHKQIVHQS 120
Query: 121 RILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPK 180
RILK+RVRG+++DL Q+T+ EE+C+V+PGV+ARFDGS IQ M+Q+W Q+ NSNFWDQK +
Sbjct: 121 RILKIRVRGTKKDLMQETSSEEICIVLPGVIARFDGSNIQSMVQKWVQEKNSNFWDQKNR 180
Query: 181 QRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSV 240
+ D+ED + Y+RLP+Q+WNV+K G C DA +TG+MPPPL+E+QSSQRY+CAVTIGEDSV
Sbjct: 181 KGDAEDTGSLYQRLPYQIWNVNKNGVCVDATVTGVMPPPLLELQSSQRYYCAVTIGEDSV 240
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRS-EQSPK-KSEPKPQSFARAS 298
ISA+RLSEDR RSLVGAILSKVVPA STI+S SK+IWRS +QSPK K E K QSFARAS
Sbjct: 241 ISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQSPKRKPEAKTQSFARAS 300
Query: 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
LTC+KD+PRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM
Sbjct: 301 SLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 360
Query: 359 LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
L KD S + PVKSDYCLCLAIHAPRKGIIE
Sbjct: 361 LAKKDKGKSVIHTEPVKSDYCLCLAIHAPRKGIIE 395
>gi|449516756|ref|XP_004165412.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cucumis sativus]
Length = 456
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 282/398 (70%), Positives = 343/398 (86%), Gaps = 5/398 (1%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADP 60
M++RT TTE+G IAC DL+D GAGKEGWLV+ PNLLCALD H++ALA+R +++ W+
Sbjct: 1 MARRTFTTELGCIACEDLADFGAGKEGWLVDSPNLLCALDSHSLALASRSIILVLGWSGS 60
Query: 61 EGLVAKIRP-ELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHP 119
+G KIRP +LSPI +EYI+A+EWLV +E++ + VGTS GYFL+Y L+GDL+ +Q+IHP
Sbjct: 61 DGYPLKIRPSDLSPIEAEYISALEWLVLDEIKVILVGTSCGYFLIYSLRGDLILKQMIHP 120
Query: 120 GRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKP 179
GRILK+RV GS+RDL+ ++ EEV + MPGV+AR +GS+IQ LQ+WFQ+S+S FWD K
Sbjct: 121 GRILKIRVHGSKRDLSHGSSLEEVSIAMPGVIARIEGSDIQNTLQKWFQESSSQFWDPKS 180
Query: 180 KQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDS 239
QRD D ENS E+L +Q+WNVSKYG CADAAITG+MPPPLME+QSS+RYFCAVT+GED+
Sbjct: 181 HQRDMNDSENSVEKLAYQVWNVSKYGACADAAITGVMPPPLMELQSSERYFCAVTVGEDA 240
Query: 240 VISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE-QSPKKSEPKPQSFARAS 298
VISAFRLSED+SRSLVGAILSKVVPATFSTI+S SKMIWRSE ++ KK + K Q+FARAS
Sbjct: 241 VISAFRLSEDKSRSLVGAILSKVVPATFSTIASFSKMIWRSEPKTSKKPDAKGQAFARAS 300
Query: 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
PLTCLKDHPRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDA+C+FMEM
Sbjct: 301 PLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDANCLFMEM 360
Query: 359 LVNKDAATSSAY---YAPVKSDYCLCLAIHAPRKGIIE 393
LVN+D A+SS+ Y P K+DYCLCLAIHAPRKGI+E
Sbjct: 361 LVNRDTASSSSNSMDYEPAKNDYCLCLAIHAPRKGIVE 398
>gi|356514563|ref|XP_003525975.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Glycine max]
Length = 460
Score = 572 bits (1473), Expect = e-160, Method: Compositional matrix adjust.
Identities = 274/400 (68%), Positives = 339/400 (84%), Gaps = 7/400 (1%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADP 60
MS+R++ TE+G IAC +L +LGAGK WLV P LLCA+D H++ LANR ++++W+
Sbjct: 1 MSRRSYKTELGCIACDELGELGAGKPHWLVETPQLLCAIDTHSLLLANRSTILLLSWSSD 60
Query: 61 EGLVA----KIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQL 116
A KIRP+LSPI +E I+A+EWL F + R + GTS GY L+Y L+G+L+HRQ+
Sbjct: 61 STAAAPPPLKIRPDLSPIDAESISALEWLAFRDHRVIVAGTSSGYLLLYSLQGELIHRQM 120
Query: 117 IHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWD 176
I+P R+LKLRVRG+++DL QDT+ EE C++M GV+ARFDGS+IQ MLQ+WF+++NS F D
Sbjct: 121 IYPERVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIARFDGSDIQNMLQKWFEEANSRFSD 180
Query: 177 QKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLME-VQSSQRYFCAVTI 235
Q PK +DSED EN+ ++P+QLWN+ KYG CADAAITG+MPPPLME QS+QRY+CAV +
Sbjct: 181 QNPKSQDSEDFENTDVKIPYQLWNIGKYGTCADAAITGIMPPPLMEQQQSNQRYYCAVAV 240
Query: 236 GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ-SPKKSEPKPQSF 294
GED+VISA+RLSE++ RSLVGAILSKVVPATFSTISS SK+IWR+E+ SPKKS+ KP+ F
Sbjct: 241 GEDAVISAYRLSENKGRSLVGAILSKVVPATFSTISSFSKLIWRNERSSPKKSDLKPRPF 300
Query: 295 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354
ARASPLTCLKDHPRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDASC+
Sbjct: 301 ARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASCL 360
Query: 355 FMEMLVNKD-AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
FMEMLVNKD A++SS+Y P+KSDYCLCLAIHAPRKGIIE
Sbjct: 361 FMEMLVNKDIASSSSSYSEPLKSDYCLCLAIHAPRKGIIE 400
>gi|356543215|ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Glycine max]
Length = 459
Score = 561 bits (1447), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/401 (68%), Positives = 332/401 (82%), Gaps = 10/401 (2%)
Query: 1 MSKRTHTTEVGSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANR-----YQTVII 55
M++R++ TE+G IAC +L +LGAGK WLV P LLCA+D H++ LANR
Sbjct: 1 MARRSYKTELGCIACEELGELGAGKPHWLVETPQLLCAIDTHSLILANRSTILLLSWSSD 60
Query: 56 NWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQ 115
+ A P L KIRP+LSPI +E I+A+EWL F + R + GTS G L Y L+G+L+HRQ
Sbjct: 61 SSAAPPPL--KIRPDLSPIDAESISALEWLAFRDHRVIVAGTSSGNVLFYSLRGELIHRQ 118
Query: 116 LIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFW 175
+I+P R+LKLRVRG+++DL QDT+ EE C++M GV+A FDGS+IQ MLQ+WF++S+S FW
Sbjct: 119 MIYPSRVLKLRVRGTKKDLIQDTSSEEFCLIMSGVIAHFDGSDIQNMLQKWFEESHSRFW 178
Query: 176 DQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLME-VQSSQRYFCAVT 234
DQ PK DSED N+ ++P+QLWN+ KYG CA+AAITG+MPPPLME QSSQRY+CAV
Sbjct: 179 DQNPKSHDSEDFGNTDVKIPYQLWNIGKYGTCAEAAITGIMPPPLMEQQQSSQRYYCAVA 238
Query: 235 IGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ-SPKKSEPKPQS 293
+GED+VISA+RLSE++ RSLVGAILSKVVPATFSTISS SK+IWRSEQ SPKKS+ KPQ
Sbjct: 239 VGEDAVISAYRLSENKGRSLVGAILSKVVPATFSTISSFSKLIWRSEQSSPKKSDQKPQP 298
Query: 294 FARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 353
FARASPLTCLKDHPRKGE+LTLSPSG+LAAITDSLGRILLLDTQALVVVRLWKGYRDASC
Sbjct: 299 FARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 358
Query: 354 VFMEMLVNKD-AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+FMEMLVNKD A++SS+Y P+KSDYCLCLAIHAPRKGIIE
Sbjct: 359 LFMEMLVNKDIASSSSSYSEPLKSDYCLCLAIHAPRKGIIE 399
>gi|224116998|ref|XP_002331804.1| predicted protein [Populus trichocarpa]
gi|222874500|gb|EEF11631.1| predicted protein [Populus trichocarpa]
Length = 354
Score = 465 bits (1197), Expect = e-128, Method: Compositional matrix adjust.
Identities = 221/295 (74%), Positives = 268/295 (90%), Gaps = 4/295 (1%)
Query: 103 LVYDLKGDLVHRQLIHPGRILKLRVRGSRRDL--TQDTAEEEVCVVMPGVLARFDGSEIQ 160
+VY L G L+HRQL++PGRILKLRVRG+++D+ + + + EEV VV+PGV+ARFDG++I+
Sbjct: 1 MVYSLDGLLIHRQLVYPGRILKLRVRGTKKDMMSSHEGSSEEVSVVIPGVIARFDGADIR 60
Query: 161 KMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPL 220
+LQ WFQ++NS+FWD+K K+RD E+L N ++RLPHQLW+V K+G CADAAITG+MPPPL
Sbjct: 61 NILQEWFQETNSHFWDEKSKRRDYEELGNGFKRLPHQLWSVDKFGLCADAAITGIMPPPL 120
Query: 221 MEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRS 280
ME+QSSQRY+ AVTIGED+VISA+RLSEDRSRSLVGAILSKV+PA FSTISS+SKMIWRS
Sbjct: 121 MEIQSSQRYYRAVTIGEDAVISAYRLSEDRSRSLVGAILSKVMPAAFSTISSVSKMIWRS 180
Query: 281 EQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL 339
E++P KK E KPQSFA+ASPLTCLKDHPRKGE+LTLSPSG+LAAITDSLGRILLLDTQAL
Sbjct: 181 ERTPTKKPEVKPQSFAKASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQAL 240
Query: 340 VVVRLWKGYRDASCVFMEMLVNKDAA-TSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
VVVRLWKGYRDA+C+FMEMLV+ ++A SS+++ P KSDYCLCLAIHAPRKGIIE
Sbjct: 241 VVVRLWKGYRDANCLFMEMLVSMNSAGASSSHHEPSKSDYCLCLAIHAPRKGIIE 295
>gi|115478506|ref|NP_001062848.1| Os09g0315800 [Oryza sativa Japonica Group]
gi|51091645|dbj|BAD36414.1| rab3-GAP regulatory domain-like [Oryza sativa Japonica Group]
gi|113631081|dbj|BAF24762.1| Os09g0315800 [Oryza sativa Japonica Group]
gi|218201904|gb|EEC84331.1| hypothetical protein OsI_30840 [Oryza sativa Indica Group]
gi|222641308|gb|EEE69440.1| hypothetical protein OsJ_28835 [Oryza sativa Japonica Group]
Length = 469
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 234/412 (56%), Positives = 298/412 (72%), Gaps = 22/412 (5%)
Query: 1 MSKRTHTTEVGSIA-----CTDLSDLGAG-KEGWLVNDPNLLCAL---DMHTIALANRYQ 51
M++R H + +A DL+ +GAG +EGWL +DP +L +L +
Sbjct: 1 MARRGHHHHLAEVALLASASEDLAAVGAGEREGWL-DDPAVLPSLAPRARALAVASAARS 59
Query: 52 TVIINWADPEGLVAKIRPELSPIASEYITAIEW--LVFEEMR-------ALAVGTSRGYF 102
+ + G +RP L P I+A+EW LV E+ A+AVGT G+
Sbjct: 60 VLAVVPVAGVGGGVTVRPALGPDDGR-ISAVEWVPLVGEDAEEAGGEGVAVAVGTDAGWL 118
Query: 103 LVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKM 162
L Y L GDL+H+Q I+P +ILKL R + + +D+ +E+ VV PGV+ARFDG+++Q M
Sbjct: 119 LFYSLAGDLLHKQSIYPSKILKLNFRERKENAWEDSGSDELSVVFPGVIARFDGADLQNM 178
Query: 163 LQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLME 222
LQ+ + S+ W K +Q D+E+ ++S+ R+P Q+WNVSK+ CADAAI GLMPPPL+E
Sbjct: 179 LQKSLHEVKSHLWKDKSEQEDAEE-DSSFGRIPFQIWNVSKFSSCADAAIVGLMPPPLLE 237
Query: 223 VQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ 282
+QSSQR++CA+T+GED+V+SA+RLSEDRSRS+VGAILS+ V ATFSTISSLSK+IWRSE
Sbjct: 238 LQSSQRHYCAITVGEDAVVSAYRLSEDRSRSIVGAILSRGVAATFSTISSLSKIIWRSEP 297
Query: 283 SP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV 341
SP KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAITDSLGRILLLDT ALV
Sbjct: 298 SPTKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAITDSLGRILLLDTHALVA 357
Query: 342 VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
VRLWKGYRDASC+F+EML+NKD A+SS + KSDYCLCLAIHAPRKGIIE
Sbjct: 358 VRLWKGYRDASCLFVEMLLNKDKASSSLHTEYTKSDYCLCLAIHAPRKGIIE 409
>gi|414885002|tpg|DAA61016.1| TPA: hypothetical protein ZEAMMB73_415761 [Zea mays]
Length = 468
Score = 435 bits (1118), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/383 (58%), Positives = 290/383 (75%), Gaps = 17/383 (4%)
Query: 25 KEGWLVNDPNLLCALD--MHTIALANRYQTVII--NWADPEGLVAKIRPELSPIASEYIT 80
+EGWL +DP +L +L ++A+A+ +V++ A G + P L P I+
Sbjct: 29 REGWL-DDPAILPSLGPRARSLAVASAAHSVLVIVAVAGGGGGGVTVEPALGPDEGR-IS 86
Query: 81 AIEWLVF--------EEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRR 132
A+EW+ F EE ++ +GT G+ L Y L GDL+H+Q I+P +ILKL R +
Sbjct: 87 AVEWVPFAGEDDAEGEEGVSVVIGTDAGWLLFYSLAGDLLHKQSIYPAKILKLNFRERKE 146
Query: 133 DLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYE 192
+ +D+ +E+ VV PGV+ARFDG+++Q +L++ FQD S W K +++D+ED E ++
Sbjct: 147 NAWEDSGSDELSVVFPGVIARFDGADLQNVLKKAFQDVKSRLWKDKFEEQDAED-EETFG 205
Query: 193 RLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSR 252
R+P Q+WNV+K+ CADAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDR+R
Sbjct: 206 RIPFQIWNVNKFSSCADAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRTR 265
Query: 253 SLVGAILSKVVPATFSTISSLSKMIWRSEQS-PKKSEPKPQSFARASPLTCLKDHPRKGE 311
S+VGAILS+ V ATFSTISSLSK++WRSE S PKKS PKPQSFA+ SPLTCLKD PRKGE
Sbjct: 266 SIVGAILSRGVAATFSTISSLSKILWRSEPSPPKKSRPKPQSFAKTSPLTCLKDSPRKGE 325
Query: 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS-SAY 370
RLTLSPSG+LAAITDSLGRILLLDT ALV VRLWKGYRDASC+F+EML+NKD A+S S +
Sbjct: 326 RLTLSPSGTLAAITDSLGRILLLDTHALVAVRLWKGYRDASCLFVEMLLNKDKASSGSMH 385
Query: 371 YAPVKSDYCLCLAIHAPRKGIIE 393
KSDYCLCLAIHAPRKGIIE
Sbjct: 386 IEYTKSDYCLCLAIHAPRKGIIE 408
>gi|357157989|ref|XP_003577981.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Brachypodium distachyon]
Length = 464
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 233/410 (56%), Positives = 298/410 (72%), Gaps = 22/410 (5%)
Query: 1 MSKRTH-TTEVGSIACTD--LSDLGAG-KEGWLVNDPNLLCALDMHTIALANRYQT---- 52
M++R H TEV +A L+ GAG +EGW+ +DP + +L ALA
Sbjct: 1 MARRGHHLTEVALLASASGYLAAAGAGEREGWM-DDPAVFPSLGPRARALAMASAARSVL 59
Query: 53 VIINWADPEGLVAKIRPELSPIASEYITAIEWLVF-------EEMRALAVGTSRGYFLVY 105
VI+ A G+ ++P L P I+A+EW+ +E A+AVGT G+ L Y
Sbjct: 60 VIVPIAGGGGVT--VKPALGPDEGR-ISAVEWVPLAGDEAGGDEGVAVAVGTDAGWLLFY 116
Query: 106 DLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQR 165
L GDL+H+Q I+P +ILKL + + +D+ +E+ VV PGV+A DG ++Q MLQ+
Sbjct: 117 TLAGDLLHKQSIYPAKILKLNFSERKENAWEDSGSDELSVVFPGVIAHCDGDDLQTMLQK 176
Query: 166 WFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQS 225
F++ S W K + D++D E+S+ R+P ++WNVSK+G CADAAI GLMPPPL+E+QS
Sbjct: 177 SFEEVKSRMWKDKFEHEDADD-ESSFGRIPIRIWNVSKFGSCADAAIVGLMPPPLLELQS 235
Query: 226 SQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSP- 284
SQR++CA+T+GED+V+SA+RLSEDRSRSLVGAILS+ V ATFSTISSLSK++WRSE SP
Sbjct: 236 SQRHYCAITVGEDAVVSAYRLSEDRSRSLVGAILSRGVAATFSTISSLSKILWRSEPSPT 295
Query: 285 KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 344
KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAITDSLGRILLLDT+ALV VRL
Sbjct: 296 KKSRPKPQSFAKTSPLTCLKDTPRKGERLTLSPSGTLAAITDSLGRILLLDTRALVAVRL 355
Query: 345 WKGYRDASCVFMEMLVNKDAATSSAYYAP-VKSDYCLCLAIHAPRKGIIE 393
WKGYRDASC+F+EML+NKD +SS+ + K DYCLCLAIHAPRKGIIE
Sbjct: 356 WKGYRDASCLFVEMLLNKDKESSSSMHLEHTKGDYCLCLAIHAPRKGIIE 405
>gi|242048872|ref|XP_002462180.1| hypothetical protein SORBIDRAFT_02g021130 [Sorghum bicolor]
gi|241925557|gb|EER98701.1| hypothetical protein SORBIDRAFT_02g021130 [Sorghum bicolor]
Length = 468
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/336 (62%), Positives = 264/336 (78%), Gaps = 12/336 (3%)
Query: 68 RPELSPIASEYITAIEWLVF--------EEMRALAVGTSRGYFLVYDLKGDLVHRQLIHP 119
+P L P I+A+EW+ +E A+AVGT G+ L Y L GDL+H+Q I+P
Sbjct: 75 KPALGPDEGR-ISAVEWVPLAGEDDADGDEGVAVAVGTDAGWLLFYSLAGDLLHKQSIYP 133
Query: 120 GRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKP 179
+ILKL R + + +D+ +E+ V PGV+ARFDG+++Q +L++ FQD S W K
Sbjct: 134 AKILKLNFRERKENAWEDSGSDELSAVFPGVIARFDGADLQSILKKTFQDVKSRLWKDKF 193
Query: 180 KQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDS 239
+++D+ED E ++ R+P Q+WNVSK+ CADAAI GLMPPPL+E+QSSQR++CA+T+GED+
Sbjct: 194 EEQDAED-EETFGRIPFQIWNVSKFSSCADAAIVGLMPPPLLELQSSQRHYCAITVGEDA 252
Query: 240 VISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQS-PKKSEPKPQSFARAS 298
V+SA+RLSEDRSRS+VGAILS+ V ATFSTISSLS+++WRSE S PKKS PKPQSFA+ S
Sbjct: 253 VVSAYRLSEDRSRSIVGAILSRGVAATFSTISSLSRILWRSEPSPPKKSRPKPQSFAKTS 312
Query: 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
PLTCLKD PRKGERLTLSPSG+LAAITDSLGRILLLDTQALV VRLWKGYRDASC+F+EM
Sbjct: 313 PLTCLKDSPRKGERLTLSPSGTLAAITDSLGRILLLDTQALVAVRLWKGYRDASCLFVEM 372
Query: 359 LVNKDAA-TSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
L+NKD A S + KSDYCLCLAIHAPRKGIIE
Sbjct: 373 LLNKDKALLRSMHIEYTKSDYCLCLAIHAPRKGIIE 408
>gi|326492111|dbj|BAJ98280.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 358
Score = 358 bits (919), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 187/332 (56%), Positives = 242/332 (72%), Gaps = 13/332 (3%)
Query: 25 KEGWLVNDPNLLCALD--MHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAI 82
+EGWL +DP +L +L +A+A+ ++V+ G ++P L P I+A+
Sbjct: 29 REGWL-DDPAVLLSLGPRARDLAVASAARSVLGIVPVAGGGGVTVKPALGPDDGR-ISAV 86
Query: 83 EWLVF-------EEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLT 135
EW+ EE + VGT G+ L Y L GDL+H+Q I+P +ILKL + +
Sbjct: 87 EWVPLDAEGSQGEEGMTVVVGTDAGWLLFYSLAGDLLHKQSIYPAKILKLNFNERKENAW 146
Query: 136 QDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLP 195
+D+ +E+ VV PGV+AR DG+++Q MLQ+ FQ+ S W K +Q D ED +S+E+ P
Sbjct: 147 EDSGSDELSVVFPGVIARCDGADLQIMLQKSFQEVKSRMWKDKFEQEDDED-TSSFEKTP 205
Query: 196 HQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLV 255
Q+WNVSK+G C DAAI GLMPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDRSRSLV
Sbjct: 206 LQIWNVSKFGSCVDAAIVGLMPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRSRSLV 265
Query: 256 GAILSKVVPATFSTISSLSKMIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLT 314
GAILS+ V ATFSTISSLSK++WRSE SP KK PKPQ+FA+ SPLTCLKD PRKGERLT
Sbjct: 266 GAILSRGVAATFSTISSLSKILWRSEPSPTKKPRPKPQAFAKTSPLTCLKDSPRKGERLT 325
Query: 315 LSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346
LSPSG+LAAITDSLGRILLLDT+ALV VRLWK
Sbjct: 326 LSPSGTLAAITDSLGRILLLDTRALVAVRLWK 357
>gi|294462996|gb|ADE77036.1| unknown [Picea sitchensis]
Length = 343
Score = 343 bits (880), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 164/280 (58%), Positives = 218/280 (77%), Gaps = 2/280 (0%)
Query: 116 LIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFW 175
++HP I +LRVRGS ++ A +E+CVV P + R D S++Q +L+R ++ + +
Sbjct: 1 MLHPCPITRLRVRGSSSGSVENAASDELCVVFPAAILRIDASDLQSLLKRCLEERSYDAR 60
Query: 176 DQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTI 235
++D++ L++ Y +L +QLWNVSK GPC+DAAITG+M PPLME QS Q+Y+CA+T+
Sbjct: 61 FPISAKKDTQGLDDVYGKLKYQLWNVSKCGPCSDAAITGIMAPPLMEDQSRQQYYCAITV 120
Query: 236 GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQS-PKKSEPKPQSF 294
G ++ +AFRLSED++RSLVGAILSKV+PAT STISSL+KM WR++QS + +E KPQ+F
Sbjct: 121 GSNATFAAFRLSEDKNRSLVGAILSKVMPATVSTISSLAKMFWRNDQSEARPAEVKPQAF 180
Query: 295 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354
ARAS LTCLKD PRKGERL+LSPSG LAA+TDSLGRILL+DTQALVVVRLWKGYRDASC
Sbjct: 181 ARASLLTCLKDDPRKGERLSLSPSGCLAAVTDSLGRILLIDTQALVVVRLWKGYRDASCF 240
Query: 355 FMEMLVNKDAATSSAY-YAPVKSDYCLCLAIHAPRKGIIE 393
F+E+ +N + + Y K D+CLCLAIHAPR+G++E
Sbjct: 241 FLEVPLNGEMPSVDGIGYGKSKHDFCLCLAIHAPRRGVVE 280
>gi|226507944|ref|NP_001140784.1| uncharacterized protein LOC100272859 [Zea mays]
gi|194701060|gb|ACF84614.1| unknown [Zea mays]
gi|414885001|tpg|DAA61015.1| TPA: hypothetical protein ZEAMMB73_415761 [Zea mays]
Length = 240
Score = 291 bits (745), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 143/180 (79%), Positives = 164/180 (91%), Gaps = 2/180 (1%)
Query: 216 MPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSK 275
MPPPL+E+QSSQR++CA+T+GED+V+SA+RLSEDR+RS+VGAILS+ V ATFSTISSLSK
Sbjct: 1 MPPPLLELQSSQRHYCAITVGEDAVVSAYRLSEDRTRSIVGAILSRGVAATFSTISSLSK 60
Query: 276 MIWRSEQSP-KKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLL 334
++WRSE SP KKS PKPQSFA+ SPLTCLKD PRKGERLTLSPSG+LAAITDSLGRILLL
Sbjct: 61 ILWRSEPSPPKKSRPKPQSFAKTSPLTCLKDSPRKGERLTLSPSGTLAAITDSLGRILLL 120
Query: 335 DTQALVVVRLWKGYRDASCVFMEMLVNKDAATS-SAYYAPVKSDYCLCLAIHAPRKGIIE 393
DT ALV VRLWKGYRDASC+F+EML+NKD A+S S + KSDYCLCLAIHAPRKGIIE
Sbjct: 121 DTHALVAVRLWKGYRDASCLFVEMLLNKDKASSGSMHIEYTKSDYCLCLAIHAPRKGIIE 180
>gi|302804542|ref|XP_002984023.1| hypothetical protein SELMODRAFT_119185 [Selaginella moellendorffii]
gi|300148375|gb|EFJ15035.1| hypothetical protein SELMODRAFT_119185 [Selaginella moellendorffii]
Length = 459
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 170/391 (43%), Positives = 230/391 (58%), Gaps = 24/391 (6%)
Query: 16 TDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADPE-------GLVAKIR 68
++L +GAGK GWL +D L+ A+ +A+A + V+ W+ G
Sbjct: 15 SELGAVGAGKPGWL-DDAALVAAMGRDLVAIARQRSLVVTPWSGAHSSAPRASGFSIDSI 73
Query: 69 PELSPIASEY-ITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRV 127
P + Y ITA+EWL +E LAVGTS G Y GDL+ +Q + G I L V
Sbjct: 74 PAATGADPSYRITALEWLFWEGWSVLAVGTSLGILCFYSEIGDLLIKQSFNVGSICNLHV 133
Query: 128 RGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDL 187
R ++ +DTAEE + V +AR D ++Q L+R + N + + +
Sbjct: 134 RCNQNK--RDTAEE-LSVAFQSSIARIDALDLQSQLRRRLLEVARN------STLERQLI 184
Query: 188 ENSYERLPHQLWNVSKYGP--CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFR 245
+L +Q+W+V G C DAAITG++PP L E QS +RYFCAVTIG DS ++AFR
Sbjct: 185 AAESTKLSYQVWSVKSSGSSICVDAAITGVLPPALFEQQSRERYFCAVTIGSDSTLAAFR 244
Query: 246 LSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE---QSPKKSEPKPQSFARASPLTC 302
LSEDR +SL + +KVVPAT S I+S +K R+ Q + +E K Q F+RAS +T
Sbjct: 245 LSEDRRKSLTELLFNKVVPATVSRITSFAKAFRRNSEPVQEARPAEVKAQEFSRASLITA 304
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
LKD PRKGE L LSP+ SLAA+TDSLGR+LL+D ALVVVRLWKGYRDA C F+E +N
Sbjct: 305 LKDSPRKGESLALSPTCSLAAVTDSLGRVLLVDVHALVVVRLWKGYRDAHCKFLEAPLNG 364
Query: 363 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ + VK D+ LCLAIHAPR+ ++E
Sbjct: 365 SSGLQH-RSSCVKEDFSLCLAIHAPRRAVVE 394
>gi|302753388|ref|XP_002960118.1| hypothetical protein SELMODRAFT_402130 [Selaginella moellendorffii]
gi|300171057|gb|EFJ37657.1| hypothetical protein SELMODRAFT_402130 [Selaginella moellendorffii]
Length = 459
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 167/391 (42%), Positives = 227/391 (58%), Gaps = 24/391 (6%)
Query: 16 TDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVIINWADPE-------GLVAKIR 68
++L +GAGK GWL +D L+ A+ +A+A + V+ W+ G
Sbjct: 15 SELGAVGAGKPGWL-DDAALVAAMGRDLVAIARQRSLVVTPWSGAHSSAPRASGFSIDSI 73
Query: 69 PELSPIASEY-ITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRV 127
P + Y ITA+EWL +E LAVGTS G Y GDL+ +Q + G I L V
Sbjct: 74 PAATGADPSYRITALEWLFWEGWSVLAVGTSLGILCFYSEIGDLLIKQSFNVGSICNLHV 133
Query: 128 RGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDL 187
R ++ + EE+ V +AR D ++Q L+R + N + + +
Sbjct: 134 RCNQ---NKRVTAEELSVAFQSSIARIDALDLQSQLRRRLLEVARN------STLERQLI 184
Query: 188 ENSYERLPHQLWNVSKYGP--CADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFR 245
+L +Q+W+V G C DAAITG++PP L E QS +RYFCAVTIG DS ++AFR
Sbjct: 185 AAESTKLSYQVWSVKSSGSSICVDAAITGVLPPALFEQQSRERYFCAVTIGSDSTLAAFR 244
Query: 246 LSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE---QSPKKSEPKPQSFARASPLTC 302
LSEDR +SL + +KVVPAT S I+S +K R+ Q + +E K Q F+RAS +T
Sbjct: 245 LSEDRRKSLTELLFNKVVPATVSRITSFAKAFRRNSEPVQEARPAEVKAQEFSRASLITA 304
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
LKD PRKGE L LSP+ SLAA+TDSLGR+LL+D ALVVVRLWKGYRDA C F+E +N
Sbjct: 305 LKDSPRKGESLALSPTCSLAAVTDSLGRVLLVDVHALVVVRLWKGYRDAHCKFLEAPLNG 364
Query: 363 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ + VK D+ LCLAIHAPR+ ++E
Sbjct: 365 SSGLQH-RSSCVKEDFSLCLAIHAPRRAVVE 394
>gi|168021568|ref|XP_001763313.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685448|gb|EDQ71843.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 480
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 161/396 (40%), Positives = 244/396 (61%), Gaps = 18/396 (4%)
Query: 11 GSIACTDLSDLGAGKEGWLVNDPNLLCALDMHTIALANRYQTVI-INW---ADPEGLVAK 66
G I +L +GAGK WL N P +L A+ +A+A ++ + W + + V K
Sbjct: 15 GCIVTDELEAVGAGKTRWLDN-PVILVAMTQEHLAIATDQVIIMQLTWKQQVNTKPFVRK 73
Query: 67 IRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLR 126
+ L P E +TA+EW+VF+ LAVGTS G L++ KG L+ +Q H +LKLR
Sbjct: 74 VGSCLEP--EEKMTAMEWVVFDGASLLAVGTSFGALLLFSQKGTLLIKQYFHSDPVLKLR 131
Query: 127 VRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSED 186
VR + + E++C++ P +AR D +++ L + + K D++D
Sbjct: 132 VRSEPLGSLGNDSSEDLCLIYPKAIARIDAIDLKVGLPKRLRMEGEGLLGWKVGG-DTQD 190
Query: 187 LENSYERLPHQLWNVSKYG---PCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISA 243
E RLP +WN+++ C+D A+ G+MPPPL+E+Q +R++CA+T+G D ++A
Sbjct: 191 GEAPINRLPFLMWNINRTAGALACSDGALAGIMPPPLLELQG-KRHYCALTVGPDCTLAA 249
Query: 244 FRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEP---KPQSFARASPL 300
FR+S ++ SLV AI+ KV+PA+ + IS+L+K W+ ++S + + P PQ+F+RAS +
Sbjct: 250 FRVSGEKQGSLVSAIIDKVMPASVTKISNLAKRFWQKDESSESNRPLEVSPQTFSRASVI 309
Query: 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV 360
T LKD+ RKGERL ++P GSLAAI DSLGR+LL+D A+VVVRLWKGYRDA C+F+E V
Sbjct: 310 TSLKDNMRKGERLAVAPGGSLAAIADSLGRVLLVDVNAVVVVRLWKGYRDAHCLFLEAPV 369
Query: 361 NKDAATS---SAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ A + + + + Y LCLAIHAPR+G+IE
Sbjct: 370 DGSADYADPQKKHLSLRRQQYRLCLAIHAPRRGVIE 405
>gi|326915108|ref|XP_003203863.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Meleagris gallopavo]
Length = 1499
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 54/338 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 271 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 330
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 331 IVTIDGFSLFQSLRACRNQVARAAASGNENV--QPPP-------------LAYKKWGLQD 375
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D A G+M P M+ S+ + A VT+G + F E
Sbjct: 376 VDTIVDHASVGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYVTVGSNPFTGFFFALE 435
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC-- 302
S+ L+ A+ SK+ A F S + W+S+ + + + A+PL
Sbjct: 436 GSSQPLLSHVALAVASKLTSALFHAASGW--LGWKSKHEEEPVQKQKPKVEPATPLAVRF 493
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
+ D R GE++ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++ + +
Sbjct: 494 GIPDSRRHGEKICLSPCNTLAAVTDDFGRVILLDVTRGLAIRMWKGYRDAEVGWIQTVED 553
Query: 362 -KDAATSSAYYAPVKSDYC-----LCLAIHAPRKGIIE 393
+ T Y+P + +C L I+APR+GI+E
Sbjct: 554 LHERETEKIDYSPFGNAHCPSRVAQFLVIYAPRRGILE 591
>gi|348577005|ref|XP_003474275.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cavia porcellus]
Length = 1416
Score = 98.2 bits (243), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE--EEVCVVMPGV 150
+ VG + GY Y G L+ QL+H +L+L+ R AE EE+ ++ P
Sbjct: 184 IVVGFTSGYVRFYTENGVLLLAQLLHEDTVLQLKCRTYAIPRHPGVAEQNEELSILYPAA 243
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S L ++ W + D
Sbjct: 244 IVTIDGFSLFQSLR--------ACRNQVAKAAASGSESVQPPPLAYKKWGLQDTDIIVDH 295
Query: 211 A---ITGLMPPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A IT L P M+ S+ F A +T+G + F E ++ L+
Sbjct: 296 ASIGITTLSPFDQMKTASNIGGFNATIKPSPPAMSQYITVGANPFTGFFYALEGSTQPLL 355
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K PK + A+PL L D
Sbjct: 356 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQRPKVEP---ATPLAVRFGLPD 410
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + VR+WKGYRDA + +++ + ++
Sbjct: 411 SRRHGESICLSPCNTLAAVTDDFGRVILLDVTRGIAVRMWKGYRDAQVGWAQIVEDLQER 470
Query: 365 ATSSAYYAPVKSD-----YCLCLAIHAPRKGIIE 393
A S AP S L I+APR+GI+E
Sbjct: 471 APDSTDGAPFGSTQGPSRVAQFLVIYAPRRGILE 504
>gi|449270247|gb|EMC80943.1| Rab3 GTPase-activating protein non-catalytic subunit [Columba
livia]
Length = 1382
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 147/338 (43%), Gaps = 54/338 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 154 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 213
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 214 IVTIDGFSLFQSLRACRNQVARAAASGNENV--QPPP-------------LAYKKWGLQD 258
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D A G+M P M+ S+ + A VT+G + F E
Sbjct: 259 VDTIVDHASIGIMTLSPFDQMKTASNIGGYNAAIKNNPPAMSQYVTVGSNPFTGFFFALE 318
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC-- 302
S+ L+ A+ SK+ A F+ S + W+S+ + ++ + A+PL
Sbjct: 319 GSSQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEPAQKQKPKVEPATPLAVRF 376
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
L D R GER+ LSP +LAA+TD+ GR++LLD + VR+WKGYRDA +++ + +
Sbjct: 377 GLPDSRRHGERICLSPCNTLAAVTDAFGRVILLDVTRGLAVRMWKGYRDAEVGWIQTVED 436
Query: 362 -KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
+ T ++P S L I+APR+GI+E
Sbjct: 437 LHERETEKMDFSPFGNAQGPSRVAQFLVIYAPRRGILE 474
>gi|281604211|ref|NP_001035244.2| rab3 GTPase-activating protein non-catalytic subunit [Rattus
norvegicus]
Length = 1387
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ R+L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTESGVLLLAQLLNEDRVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A FS S + W+S E++ +K +PK + A+PL L D
Sbjct: 327 SHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQKQKPKMEP---ATPLAVRFGLPD 381
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 382 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 441
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 442 VPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILE 475
>gi|410986551|ref|XP_003999573.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like, partial [Felis catus]
Length = 771
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 146/331 (44%), Gaps = 40/331 (12%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDSVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASIGIMTLSPFDQMKTASNVGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTCLKDHPR 308
A+ SK+ A F+ S + W+S E+ K +PK + A + L D R
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEVVPKQKPKVEPAAPLAVRFGLPDSRR 385
Query: 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATS 367
GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +M+++ + +
Sbjct: 386 HGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWMQIVEDLHERVPE 445
Query: 368 SAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 446 KADFSPFGNTQGPSRVAQFLVIYAPRRGILE 476
>gi|327262454|ref|XP_003216039.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 2 [Anolis carolinensis]
Length = 1383
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 54/338 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 215 VVTIDGFSLFQSLRACRNQVARAAASGNENV--QPPP-------------LAYKKWGLQD 259
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D G+M P M+ S+ F A +T+G + F E
Sbjct: 260 VDTIVDHVSVGIMTLSPFDQMKTASTIGGFNATIKNNPPAMSQYITVGSNPFTGFFYALE 319
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC-- 302
S+ L+ A+ SK+ A F S + W+++Q + + + A+PL
Sbjct: 320 GSSQPLLSHVALAVASKLTSAFFHAASGW--LGWKNKQEEEPVQKQKPKVEPATPLAVRF 377
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
+ D R GER+ LSP SLAA+TD GR+LLLD + VR+WKGYRDA +++++ +
Sbjct: 378 GIPDSRRHGERICLSPCNSLAAVTDDFGRVLLLDVTRGLSVRMWKGYRDAQVGWIQIVED 437
Query: 362 -----KDAATSSAYYAPVK-SDYCLCLAIHAPRKGIIE 393
+ SS + P S L I+APR+GI+E
Sbjct: 438 LHEREAEKMDSSPFGTPQGPSRVAQFLVIYAPRRGILE 475
>gi|327262452|ref|XP_003216038.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 1 [Anolis carolinensis]
Length = 1380
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 145/338 (42%), Gaps = 54/338 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 152 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 211
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 212 VVTIDGFSLFQSLRACRNQVARAAASGNENV--QPPP-------------LAYKKWGLQD 256
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D G+M P M+ S+ F A +T+G + F E
Sbjct: 257 VDTIVDHVSVGIMTLSPFDQMKTASTIGGFNATIKNNPPAMSQYITVGSNPFTGFFYALE 316
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC-- 302
S+ L+ A+ SK+ A F S + W+++Q + + + A+PL
Sbjct: 317 GSSQPLLSHVALAVASKLTSAFFHAASGW--LGWKNKQEEEPVQKQKPKVEPATPLAVRF 374
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
+ D R GER+ LSP SLAA+TD GR+LLLD + VR+WKGYRDA +++++ +
Sbjct: 375 GIPDSRRHGERICLSPCNSLAAVTDDFGRVLLLDVTRGLSVRMWKGYRDAQVGWIQIVED 434
Query: 362 -----KDAATSSAYYAPVK-SDYCLCLAIHAPRKGIIE 393
+ SS + P S L I+APR+GI+E
Sbjct: 435 LHEREAEKMDSSPFGTPQGPSRVAQFLVIYAPRRGILE 472
>gi|397471286|ref|XP_003807227.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Pan paniscus]
Length = 1393
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------ 359
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 360 VNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
V + A SS + S L I+APR+GI+E
Sbjct: 443 VPEKADFSSFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|255003799|ref|NP_001157272.1| rab3 GTPase-activating protein non-catalytic subunit [Gallus
gallus]
Length = 1382
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 145/338 (42%), Gaps = 54/338 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 154 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 213
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 214 IVTIDGFSLFQSLRACRNQVARAAASGNENV--QPPP-------------LAYKKWGLQD 258
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D A G+M P M+ S+ + A VT+G + F E
Sbjct: 259 VDTIVDHASVGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYVTVGSNPFTGFFFALE 318
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC-- 302
S+ L+ A+ SK+ A F S + W+S+ + + + A+PL
Sbjct: 319 GSSQPLLSHVALAVASKLTSALFHAASGW--LGWKSKHEEEPVQKQKPKVEPATPLAVRF 376
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
+ D R GE++ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++ + +
Sbjct: 377 GIPDSRRHGEKICLSPCNTLAAVTDDFGRVILLDVTRGLAIRMWKGYRDAEVGWIQTVED 436
Query: 362 -KDAATSSAYYAPVKSDYC-----LCLAIHAPRKGIIE 393
+ T Y+P + C L I+APR+GI+E
Sbjct: 437 LHERETEKIDYSPFGNAQCPSRVAQFLVIYAPRRGILE 474
>gi|187607123|ref|NP_001120595.1| rab3 GTPase-activating protein, non-catalytic subunit [Xenopus
(Silurana) tropicalis]
gi|171846396|gb|AAI61630.1| LOC100145752 protein [Xenopus (Silurana) tropicalis]
Length = 1408
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 148/331 (44%), Gaps = 40/331 (12%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ G + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 178 IVFGFTSGYVRFYTESGVLLLSQLLNQEAVLQLKCRTYEVPRHPGVTEQHEEMSLLYPSA 237
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ + SE+++ L ++ W + D
Sbjct: 238 VVTIDGFSLFQSLRACRNQV------ARAAASGSENVQPP--PLAYKKWGLQDVDRIVDH 289
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S F A +T+G + F E ++ L+
Sbjct: 290 ASVGVMALSPFDQMKTASILGGFNAAIKSSPPTMSQYITVGSNPFTGFFFALEGSTQPLL 349
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPR 308
A+ SK+ A FS S + W+S+ + + + A+PL L D R
Sbjct: 350 SHVALAVASKLTSALFSAASGW--LGWKSKHEEEPQQKQKPKVEPANPLAVRFGLPDSRR 407
Query: 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATS 367
GER++LSP +LAA+TD GR++LLD + +R+WKGYRDA +M+++ + + +
Sbjct: 408 HGERVSLSPCNTLAAVTDDFGRVILLDVGRGIAIRMWKGYRDAQVGWMQIVEDLHERESE 467
Query: 368 SAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
+++P + S L I+APR+GI+E
Sbjct: 468 RGHHSPFQNVKGPSRVAQFLVIYAPRRGILE 498
>gi|332231895|ref|XP_003265130.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Nomascus leucogenys]
Length = 1393
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|402857168|ref|XP_003893142.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Papio anubis]
Length = 1352
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 IPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILE 476
>gi|109018221|ref|XP_001103011.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Macaca mulatta]
Length = 1393
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|355745903|gb|EHH50528.1| hypothetical protein EGM_01375 [Macaca fascicularis]
gi|380786945|gb|AFE65348.1| rab3 GTPase-activating protein non-catalytic subunit [Macaca
mulatta]
gi|383409259|gb|AFH27843.1| rab3 GTPase-activating protein non-catalytic subunit [Macaca
mulatta]
Length = 1393
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|114572726|ref|XP_514211.2| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Pan troglodytes]
gi|410224106|gb|JAA09272.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410252186|gb|JAA14060.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410252188|gb|JAA14061.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410303536|gb|JAA30368.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
gi|410338517|gb|JAA38205.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Pan
troglodytes]
Length = 1393
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|74006191|ref|XP_536122.2| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Canis lupus familiaris]
Length = 1394
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEELVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSLPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILE 476
>gi|3608356|gb|AAC35881.1| rab3-GAP regulatory domain [Homo sapiens]
Length = 1393
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGRFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++ + + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQTVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|255003810|ref|NP_001157226.1| rab3 GTPase-activating protein non-catalytic subunit [Mus musculus]
Length = 1387
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 143/331 (43%), Gaps = 40/331 (12%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ ++L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTESGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPR 308
A+ SK+ A FS S + W+S+ + + A+PL L D R
Sbjct: 327 SHVALAVASKLTSALFSAASGW--LGWKSKHEEDTVQKQKPKMEPATPLAVRFGLPDSRR 384
Query: 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATS 367
GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 385 HGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDLHERVPE 444
Query: 368 SAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 445 KGGFSPFGNTQGPSRVAQFLVIYAPRRGILE 475
>gi|403277744|ref|XP_003930510.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Saimiri boliviensis boliviensis]
Length = 1386
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+ E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKGKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKAEFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|297661945|ref|XP_002809484.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Pongo abelii]
Length = 1393
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|19923790|ref|NP_036546.2| rab3 GTPase-activating protein non-catalytic subunit [Homo sapiens]
gi|62511132|sp|Q9H2M9.1|RBGPR_HUMAN RecName: Full=Rab3 GTPase-activating protein non-catalytic subunit;
AltName: Full=RGAP-iso; AltName: Full=Rab3
GTPase-activating protein 150 kDa subunit; AltName:
Full=Rab3-GAP p150; Short=Rab3-GAP150; AltName:
Full=Rab3-GAP regulatory subunit
gi|12005821|gb|AAG44636.1|AF255648_1 rGAP-iso [Homo sapiens]
gi|20521672|dbj|BAA74862.2| KIAA0839 protein [Homo sapiens]
gi|119613710|gb|EAW93304.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Homo
sapiens]
gi|148922274|gb|AAI46761.1| RAB3 GTPase activating protein subunit 2 (non-catalytic) [Homo
sapiens]
gi|158255904|dbj|BAF83923.1| unnamed protein product [Homo sapiens]
gi|168267612|dbj|BAG09862.1| RAB3 GTPase-activating protein non-catalytic subunit [synthetic
construct]
Length = 1393
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++ + + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQTVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|291402372|ref|XP_002717440.1| PREDICTED: rab3 GTPase-activating protein, non-catalytic subunit
[Oryctolagus cuniculus]
Length = 1407
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 170 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 229
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 230 IVTIDGFSLFQSLRA--------CRNQVAKATASGNEHIQPPPLAYKKWGLQDIDTIIDH 281
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 282 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 341
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 342 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 396
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 397 SRRHGESICLSPCNTLAAVTDDFGRVILLDVSRGIAIRMWKGYRDAQIGWIQIVEDLHER 456
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 457 VPEKVDFSPFGNTQGPSRVAQFLVIYAPRRGILE 490
>gi|296230057|ref|XP_002760544.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Callithrix jacchus]
Length = 1392
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 149/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+ E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKGKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQVVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|301769281|ref|XP_002920055.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Ailuropoda melanoleuca]
Length = 1393
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 150/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPVA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 327 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 381
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 382 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 441
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 442 VPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILE 475
>gi|62510946|sp|Q5U1Z0.2|RBGPR_RAT RecName: Full=Rab3 GTPase-activating protein non-catalytic subunit;
AltName: Full=Rab3 GTPase-activating protein 150 kDa
subunit; AltName: Full=Rab3-GAP p150; Short=Rab3-GAP150;
AltName: Full=Rab3-GAP regulatory subunit
Length = 1386
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 150/334 (44%), Gaps = 47/334 (14%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y +G L+ QL++ R+L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYT-EGVLLLAQLLNEDRVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 213
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 214 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 265
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 266 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 325
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A FS S + W+S E++ +K +PK + A+PL L D
Sbjct: 326 SHVALAVASKLTSALFSAASGW--LGWKSKHEEETVQKQKPKMEP---ATPLAVRFGLPD 380
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 381 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 440
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 441 VPEKGDFSPFGNTQGPSRVAQFLVIYAPRRGILE 474
>gi|311265237|ref|XP_003130554.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-activating protein
non-catalytic subunit-like [Sus scrofa]
Length = 1392
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 143/334 (42%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG S GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFSSGYLRFYTQNGVLLLAQLLNEDLVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRACR--------NQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ + A +T+G + F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLT------CLKD 305
A+ SK+ A F+ S W +S + E P+ + P T L D
Sbjct: 327 SHVALAVASKLTSALFNAASG-----WLGWKSKHEEEAVPRQKPKVEPATPLAVRFGLPD 381
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 382 SRRHGESICLSPCNTLAAVTDDFGRVILLDVTRGIAIRMWKGYRDAQTGWIQIVEDLHER 441
Query: 365 ATSSAYYAPVKSD-----YCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 442 VPERADFSPFGSPQGPSRVAQFLVIYAPRRGILE 475
>gi|120537496|gb|AAI29146.1| Rab3gap2 protein [Danio rerio]
Length = 1143
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 149/329 (45%), Gaps = 43/329 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG S GY Y G L+ QL+H +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFSSGYVRFYTESGVLLLAQLLHEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQD------SNSNFWDQKP---KQRDSEDLENSYERLPHQLWNV 201
L DG + + L+ + S+ P K+ +D++ + + +
Sbjct: 216 LVTIDGFSLFQSLRACRNQVARAAAAGSDVIQPPPLAYKKWGLQDMDTIADHSSIGITTL 275
Query: 202 SKYGPCADAAITGLM------PPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLV 255
S + +A+I G PP M +Y +T+G F E S+ L+
Sbjct: 276 SVFDQMKNASILGGFHASVKGSPPAMS-----QY---ITVGGGPYTGFFYAIEGSSQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC-LKDHP 307
A+ SK+ A FS S + W+S E+S +K +PK + A A P+ L D
Sbjct: 328 SHVALAVASKLTSALFSAASGW--LGWKSKNEEESVQKQKPKVEP-ATALPVRFGLPDSR 384
Query: 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM---EMLVNKDA 364
R GE + LSP ++A +TD GR+ LLD + +R+WKGYRDA ++ E +D
Sbjct: 385 RHGESICLSPCNTMAGVTDDFGRVTLLDVARGIAIRMWKGYRDAQLGWVQVSEARGERDI 444
Query: 365 ATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
ATS + + + L I+APR+GI+E
Sbjct: 445 ATSPS----MPRRHAQFLVIYAPRRGILE 469
>gi|354465152|ref|XP_003495044.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Cricetulus griseus]
Length = 1372
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 149/330 (45%), Gaps = 38/330 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ ++L+L+ R R EE+ ++ P
Sbjct: 138 IVVGFTSGYVRFYTESGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 197
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKP----KQRDSEDLENSYERLPHQLW 199
+ DG + + L+ + N N Q P K+ +D++ + +
Sbjct: 198 IVTIDGFSLFQSLRACRNQVAKAAASGNENI--QPPPLAYKKWGLQDIDTIVDHASIGIM 255
Query: 200 NVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVG--- 256
+S + A++ G + + + + +T+G F E ++ L+
Sbjct: 256 TLSPFDQMKTASVIGGINAAIKNSPPAMSQY--ITVGSSPFTGFFYALEGSTQPLLSHVA 313
Query: 257 -AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKDHPRK 309
A+ SK+ A FS S + W+S E++ +K +PK + A+PL L D R
Sbjct: 314 LAVASKLTSALFSAASGW--LGWKSKHEEETIQKQKPKMEP---ATPLAVRFGLPDSRRH 368
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------VNKD 363
GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ V +
Sbjct: 369 GESICLSPCNTLAAVTDDFGRVILLDVSRGIAIRMWKGYRDAQIGWIQIVEDLHERVPEK 428
Query: 364 AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S S L I+APR+GI+E
Sbjct: 429 GDLSPFGNTQGPSRVAQFLVIYAPRRGILE 458
>gi|344236434|gb|EGV92537.1| Rab3 GTPase-activating protein non-catalytic subunit [Cricetulus
griseus]
Length = 1302
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 149/330 (45%), Gaps = 38/330 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ ++L+L+ R R EE+ ++ P
Sbjct: 68 IVVGFTSGYVRFYTESGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 127
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKP----KQRDSEDLENSYERLPHQLW 199
+ DG + + L+ + N N Q P K+ +D++ + +
Sbjct: 128 IVTIDGFSLFQSLRACRNQVAKAAASGNENI--QPPPLAYKKWGLQDIDTIVDHASIGIM 185
Query: 200 NVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVG--- 256
+S + A++ G + + + + +T+G F E ++ L+
Sbjct: 186 TLSPFDQMKTASVIGGINAAIKNSPPAMSQY--ITVGSSPFTGFFYALEGSTQPLLSHVA 243
Query: 257 -AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKDHPRK 309
A+ SK+ A FS S + W+S E++ +K +PK + A+PL L D R
Sbjct: 244 LAVASKLTSALFSAASGW--LGWKSKHEEETIQKQKPKMEP---ATPLAVRFGLPDSRRH 298
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------VNKD 363
GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ V +
Sbjct: 299 GESICLSPCNTLAAVTDDFGRVILLDVSRGIAIRMWKGYRDAQIGWIQIVEDLHERVPEK 358
Query: 364 AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S S L I+APR+GI+E
Sbjct: 359 GDLSPFGNTQGPSRVAQFLVIYAPRRGILE 388
>gi|255003797|ref|NP_001157271.1| rab3 GTPase-activating protein non-catalytic subunit [Taeniopygia
guttata]
Length = 1383
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 145/338 (42%), Gaps = 54/338 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 154 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 213
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 214 IVTIDGFSLFQSLRACRNQVARAAASGNENV--QPPP-------------LAYKKWGLQD 258
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D A G+M P M+ S+ + A VT+G + F E
Sbjct: 259 VDMIVDHASIGIMTLCPFDQMKTASNIGGYNAAIKNSPPAMSQYVTVGANPFTGFFFALE 318
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC-- 302
S+ L+ A+ SK+ A F+ S + W+S+ + + + A+PL
Sbjct: 319 GSSQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEPVQKQKPKVEPATPLAVRF 376
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
L D R GER+ LSP +LAA+TD GR++LLD + VR+WKGYRDA +++ + +
Sbjct: 377 GLPDSRRHGERICLSPCNTLAAVTDEFGRVILLDVTRGLAVRMWKGYRDAEVGWIQTVED 436
Query: 362 -KDAATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
++ T +P S L I+APR+GI+E
Sbjct: 437 LQERETEKMDSSPFGNAQGPSRVAQFLVIYAPRRGILE 474
>gi|126307101|ref|XP_001375651.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Monodelphis domestica]
Length = 1392
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 147/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 158 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 217
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 218 IVTIDGFSLFQSLRA--------CRNQVAKATASGNENIQPPPLAYKKWGLQDIDTIIDH 269
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E S+ L+
Sbjct: 270 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSSQPLL 329
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 330 SHVALAVASKLTSALFNAASGW--LGWKSKHEEENVQKQKPKVEP---ATPLAVRFGLPD 384
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA 365
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 385 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGLAIRMWKGYRDAQIGWIQIIEDLHER 444
Query: 366 TSSAY------YAPVKSDYCLCLAIHAPRKGIIE 393
S A S L I+APR+GI+E
Sbjct: 445 ESEKIDLSPFGNAQGPSRVAQFLVIYAPRRGILE 478
>gi|149743780|ref|XP_001488184.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Equus caballus]
Length = 1393
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 268 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQTGWIQIVEDLHER 442
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 443 VPEKVDFSPFGNTQGPSRVAQFLVIYAPRRGILE 476
>gi|395531403|ref|XP_003767768.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Sarcophilus harrisii]
Length = 1235
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 149/336 (44%), Gaps = 50/336 (14%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 157 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 216
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 217 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 268
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E S+ L+
Sbjct: 269 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSSQPLL 328
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 329 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 383
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN---- 361
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 384 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGLAIRMWKGYRDAQIGWIQIVEDLHER 443
Query: 362 ----KDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
D + + P S L I+APR+GI+E
Sbjct: 444 ESEKMDLSPFGSTQGP--SRVAQFLVIYAPRRGILE 477
>gi|344296450|ref|XP_003419920.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Loxodonta africana]
Length = 1384
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 145/333 (43%), Gaps = 45/333 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+LR R R EE+ ++ P
Sbjct: 149 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLRCRTYEIPRHPGVTEQNEELSILYPAA 208
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 209 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTVIDH 260
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 261 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 320
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ ++ +PK + A+PL L D
Sbjct: 321 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAIQRQKPKVEP---ATPLAVRFGLPD 375
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA 365
R GE + LSP +LAA TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 376 SRRHGESICLSPCNTLAAATDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQVVEDLHER 435
Query: 366 TSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
+P S L I+APR+GI+E
Sbjct: 436 PEKVELSPFGNTQGPSRVAQFLVIYAPRRGILE 468
>gi|62511118|sp|Q8BMG7.2|RBGPR_MOUSE RecName: Full=Rab3 GTPase-activating protein non-catalytic subunit;
AltName: Full=Rab3 GTPase-activating protein 150 kDa
subunit; AltName: Full=Rab3-GAP p150; Short=Rab3-GAP150;
AltName: Full=Rab3-GAP regulatory subunit
Length = 1366
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 144/331 (43%), Gaps = 41/331 (12%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y +G L+ QL++ ++L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYT-EGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 213
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 214 IVTIDGFSLFQSLRACR--------NQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 265
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 266 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 325
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPR 308
A+ SK+ A FS S + W+S+ + + A+PL L D R
Sbjct: 326 SHVALAVASKLTSALFSAASGW--LGWKSKHEEDTVQKQKPKMEPATPLAVRFGLPDSRR 383
Query: 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATS 367
GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 384 HGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDLHERVPE 443
Query: 368 SAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 444 KGGFSPFGNTQGPSRVAQFLVIYAPRRGILE 474
>gi|426239493|ref|XP_004013655.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Ovis aries]
Length = 1392
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTENGVLLLAQLLNEDSVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ + A +T+G F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 327 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 381
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 382 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQTGWIQIVEDLHER 441
Query: 365 ATSSAYYAPVKSD-----YCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 442 VPEKGDFSPFGSPQGPSRVAQFLVIYAPRRGILE 475
>gi|300794416|ref|NP_001179128.1| rab3 GTPase-activating protein non-catalytic subunit [Bos taurus]
gi|296479323|tpg|DAA21438.1| TPA: RAB3 GTPase activating protein subunit 2 (non-catalytic) [Bos
taurus]
Length = 1392
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTENGVLLLAQLLNEDSVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ + A +T+G F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 327 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAFQKQKPKVEP---ATPLAVRFGLPD 381
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 382 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQTGWIQIVEDLHER 441
Query: 365 ATSSAYYAPVKSD-----YCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 442 VPEKGDFSPFGSPQGPSRVAQFLVIYAPRRGILE 475
>gi|345329564|ref|XP_001511701.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Ornithorhynchus anatinus]
Length = 1691
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 149/341 (43%), Gaps = 60/341 (17%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 370 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 429
Query: 151 LARFDGSEIQKMLQ-------RWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
+ DG + + L+ R N N Q P L ++ W +
Sbjct: 430 IVTIDGFSLFQSLRACRNQVARAAASGNENI--QPPP-------------LAYKKWGLQD 474
Query: 204 YGPCADAAITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSE 248
D A G+M P M+ S+ F A +T+G + F E
Sbjct: 475 VDTIIDHASIGIMTLSPFDQMKTASNIGGFNATIKNSPPAMSQYITVGSNPFTGFFYALE 534
Query: 249 DRSRSLVG----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLT 301
++ L+ A+ SK+ A F+ S + W+S E++ +K +PK + A+PL
Sbjct: 535 GSTQPLLSHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLA 589
Query: 302 C---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA ++++
Sbjct: 590 VRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGLAIRMWKGYRDAQIGWVQV 649
Query: 359 LVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
+ + + + +P S L I+APR+GI+E
Sbjct: 650 IEDLHERESEKTDLSPFGNTQGPSRVAQFLVIYAPRRGILE 690
>gi|320164262|gb|EFW41161.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1485
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 147/327 (44%), Gaps = 37/327 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGS--RRDLTQDTAEEEVCVVMPGV 150
+ VG S GY + +G+LV QL+H ++++++R + RR++ D + V+ PG
Sbjct: 45 VVVGYSSGYVRFFTDRGELVMSQLLHSAPVVQIKLRTTYRRREMNDD-----LTVLFPGT 99
Query: 151 LARFDG-SEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCAD 209
DG S +Q +L Q S + + L + ++ WN ++ D
Sbjct: 100 AVSIDGFSLLQSLLACIGQLSAGA---NSAAAQVASTLPAGSAAIAYKKWNFNQQEETCD 156
Query: 210 AAITGLMPPPL------MEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVV 263
L P M V + +T+G+ +I + +E + L+ V
Sbjct: 157 LVSCALEAPNAYDHLMSMSVGAMHPVHRYITVGKLPMIGLYSTTEGQRPFFSAVALASSV 216
Query: 264 PATF-STISSLSKMIWRSEQSPKKSEPK----------PQSFARASPL---TCLKDHPRK 309
+T S + S +K W + ++ + + P + S L + + D R+
Sbjct: 217 ASTLTSAVFSFAKNWWGGGSTQQQQQQQHHQQQQQQQQPPVIEQGSLLPLRSSISDPRRR 276
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM---LVNKDAAT 366
+ L PSG+LA TD GR++LLD +VR+WKGYRDA C ++E+ + +++
Sbjct: 277 IASIQLDPSGTLAVTTDGFGRVMLLDVADATIVRMWKGYRDAQCGWIEVDEFIADEELVH 336
Query: 367 SSAYYAPVKSDYCLCLAIHAPRKGIIE 393
A ++ + L I+APR+G++E
Sbjct: 337 GQQQRAACRASF---LCIYAPRRGLLE 360
>gi|348520730|ref|XP_003447880.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Oreochromis niloticus]
Length = 1368
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 147/329 (44%), Gaps = 42/329 (12%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL+H +L+L+ R R EE+ ++ P
Sbjct: 161 VVVGFTSGYVRFYTESGVLLLAQLLHEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAA 220
Query: 151 LARFDGSEIQKML-----QRWFQDSNSNFWDQKP----KQRDSEDLENSYERLPHQLWNV 201
+ DG + + L Q + N Q P K+ ++++ + + +
Sbjct: 221 MVTIDGFSLFQSLRACRNQVARAAAAGNDVIQPPPLAYKKWGLQEMDTIVDHSSVGIMTL 280
Query: 202 SKYGPCADAAITGLM------PPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLV 255
+ +A+I G PP M +Y VT+G + E S+ L+
Sbjct: 281 CVFDQMKNASILGGFNASVKGSPPAM-----SQY---VTVGSGPYTGFYYAIEGSSQPLL 332
Query: 256 G----AILSKVVPATFSTISSLSKMIWR----SEQSPKKSEPKPQSFARASPLTC---LK 304
A+ SK+ A FS S + W E++P+K +PK + A+PL+ L
Sbjct: 333 SHVAMAVASKLTSALFSAASGW--LGWNKNKNEEEAPQKQKPKVEP---ATPLSIRFGLP 387
Query: 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDA 364
D R GE + LSP +LA +TD GR+ LLD + +R+WKGYRDA ++++ +
Sbjct: 388 DSRRHGESICLSPCNTLAGVTDDFGRVTLLDLARGIAIRMWKGYRDAQLGWLQVPEERSE 447
Query: 365 ATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S A + + L L I+APR+GI+E
Sbjct: 448 RDLSP-SASLPRRHALFLIIYAPRRGILE 475
>gi|281344739|gb|EFB20323.1| hypothetical protein PANDA_008738 [Ailuropoda melanoleuca]
Length = 1397
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 50/338 (14%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPVA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC------ 302
A+ SK+ A F+ S + W+S E++ +K +PK + A+P
Sbjct: 327 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPFLFSFKIRF 381
Query: 303 -LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN 361
L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ +
Sbjct: 382 GLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVED 441
Query: 362 -KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
+ A ++P S L I+APR+GI+E
Sbjct: 442 LHERVPEKADFSPFGNTQGPSRVAQFLVIYAPRRGILE 479
>gi|395836200|ref|XP_003791050.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Otolemur garnettii]
Length = 1385
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 147/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 148 IVVGFTSGYVRFYTENGVLLLAQLLNEDSVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 207
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 208 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 259
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 260 ASVGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 319
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+ E++ +K +PK + A+PL L D
Sbjct: 320 SHVALAVASKLTSALFNAASGW--LGWKGKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 374
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYR A +++++ + +
Sbjct: 375 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRGAQIGWIQIVEDLHER 434
Query: 365 ATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 435 VPEKVDFSPFGNTQGPSRVAQFLVIYAPRRGILE 468
>gi|431902427|gb|ELK08927.1| Rab3 GTPase-activating protein non-catalytic subunit [Pteropus
alecto]
Length = 1399
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 147/341 (43%), Gaps = 50/341 (14%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTESGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSF-------ARASPLT 301
A+ SK+ A F+ S + W+S E++ +K +PK + R +PLT
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEETVQKQKPKLEPATPLAVRQVRRAPLT 385
Query: 302 C---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA + ++
Sbjct: 386 GQFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQTGWTQV 445
Query: 359 L------VNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ V + S A L I+APR+GI+E
Sbjct: 446 VEDLHERVPERGDPSRFGGAQGPGRVAQFLVIYAPRRGILE 486
>gi|426333837|ref|XP_004028475.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
[Gorilla gorilla gorilla]
Length = 1417
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 148/334 (44%), Gaps = 46/334 (13%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + G Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGCVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 267
Query: 211 AITGLMPPPL---MEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M M+ S+ F A +T+G + F E ++ L+
Sbjct: 268 ASVGIMTLSAFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKD 305
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL L D
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEAVQKQKPKVEP---ATPLAVRFGLPD 382
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDA 364
R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 383 SRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHER 442
Query: 365 ATSSAYYAPVK-----SDYCLCLAIHAPRKGIIE 393
A ++P S L I+APR+GI+E
Sbjct: 443 VPEKADFSPFGNSQGPSRVAQFLVIYAPRRGILE 476
>gi|417406408|gb|JAA49864.1| Putative rab3 gtpase-activating protein non-catalytic subunit
[Desmodus rotundus]
Length = 1396
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 46/332 (13%)
Query: 95 VGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGVLA 152
+G + G Y G L+ QL++ +L+L+ R R EE+ ++ P +
Sbjct: 157 LGFTSGSVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAAIV 216
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
DG + + L+ +Q K S + L ++ W + D A
Sbjct: 217 TIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDHAS 268
Query: 213 TGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLVG- 256
G+M P M+ S+ F A VT+G + F E ++ L+
Sbjct: 269 IGIMTLSPFDQMKTASNIGGFSAAIKNSPPAMSQYVTVGANPFTGFFYALEGSTQPLLSH 328
Query: 257 ---AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC---LKDHP 307
A+ SK+ A F+ S + W+S E++ K +PK + A+PL L D
Sbjct: 329 VALAVASKLTSALFNAASGW--LGWKSKHEEEAVPKQKPKVEP---ATPLAVRFGLPDSR 383
Query: 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------VN 361
R GE + +SP +LAA+TD GR++LLD + +R+WKGYRDA +++++ V
Sbjct: 384 RHGESICVSPCNTLAAVTDDFGRVVLLDVARGIAIRMWKGYRDAQIGWIQIVEDLHERVP 443
Query: 362 KDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ +S A S L I+APR+GI+E
Sbjct: 444 EKVDSSPFGNAQGPSRVAQFLVIYAPRRGILE 475
>gi|351696471|gb|EHA99389.1| Rab3 GTPase-activating protein non-catalytic subunit
[Heterocephalus glaber]
Length = 1373
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 146/345 (42%), Gaps = 54/345 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFTSGYVRFYTETGVLLLAQLLNEDTVLQLKCRTYEIPRHPGVTEQSEELSILYPAA 215
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ K SE++E L ++ W + D
Sbjct: 216 IVTIDGFSLFQSLRACRNQV------AKAAASGSENIEPP--PLAYKKWGLQDIDTITDH 267
Query: 211 A---ITGLMPPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A +T L P M+ S+ A +T+G F E + L+
Sbjct: 268 ASIGVTTLSPFDQMKTASNIGGINAAVKNSPPAMSQYITVGASPFTGFFYALEGSTPPLL 327
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSE--------QSPKKSEPKPQSFARASP---- 299
A+ SK+ A F+ S + W+S+ Q PK P + + SP
Sbjct: 328 SHVALAVASKLTSALFNAASGW--LGWKSKHEEEPVQRQKPKVEPASPLAVRQVSPAAPS 385
Query: 300 -----LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354
+ L D R GE + LSP +LAA+TD GR++LLD + VR+WKGYRDA
Sbjct: 386 SGLEGIFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAVRMWKGYRDAQAG 445
Query: 355 FMEMLVN-KDAATSSAYYAPVKSD-----YCLCLAIHAPRKGIIE 393
+++++ + ++ A +P +S L I+APR+GI+E
Sbjct: 446 WVQVVEDLQERVPGRADCSPFRSGQGPSRVAQFLVIYAPRRGILE 490
>gi|156368645|ref|XP_001627803.1| predicted protein [Nematostella vectensis]
gi|156214723|gb|EDO35703.1| predicted protein [Nematostella vectensis]
Length = 575
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 142/327 (43%), Gaps = 33/327 (10%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
+ G + GY +Y G L+ QL+H +++L+ R + + E+ V+ P V +
Sbjct: 93 IIAGMTSGYMRIYLQNGSLMFSQLLHEDYVVRLKCR-TWQPYRSFGKVEQGSVLYPLVSS 151
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
R S L+ S Q +D L ++ W D A
Sbjct: 152 RLISSNSPYSLRSKRSHSVCLVSAQASGMQDLIQPPP----LAYKKWRFDGQKHITDIAS 207
Query: 213 TGLMPPPLMEVQSSQRYFCA---------------VTIGEDSVISAFRLSEDRSRSLVG- 256
G++ + + + + V G D ++ + E L+
Sbjct: 208 CGVVTQNMFDQLQTASFIGGYNAVIRTSAPAMSHYVASGADPFLAVYCAIEGSGPPLISD 267
Query: 257 ---AILSKVVPATFSTISSLSKMI-WRSEQSPKKSE------PKPQSFARASPLTCLKDH 306
A+ SK+ A S +S+ S + W S+ + + +E PK + A+ + L D
Sbjct: 268 VAMAVASKLTSAVLSRLSAASGWLGWGSKPAAQPAEQTKPPKPKVEKGAKLAARFGLPDF 327
Query: 307 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAAT 366
PR+G +TL+P+G +A TD GR++LLD + + +R+WKGYR+A C + ++V++D T
Sbjct: 328 PRRGTNITLAPNGKVAVTTDEFGRVMLLDVKKGIAIRMWKGYREAECGW--IMVDEDDFT 385
Query: 367 SSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S + L L I+A ++GI+E
Sbjct: 386 SHEPSTNEQHRTALFLVIYAAKRGILE 412
>gi|443709560|gb|ELU04193.1| hypothetical protein CAPTEDRAFT_19824 [Capitella teleta]
Length = 1405
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 143/321 (44%), Gaps = 29/321 (9%)
Query: 95 VGTSRGYFLVYDLKGDLVHRQLIHPGRI--LKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
VG S GY +Y G ++ QL + +K R R + EEV ++ L
Sbjct: 145 VGFSSGYVRMYTETGAVLLSQLFSMESVQGIKCRTYEPPRHSAEAERHEEVSILYRKSLV 204
Query: 153 RFDGSEIQKMLQRWFQD------SNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK--- 203
DG + + L+ S S+ P L+ H VS
Sbjct: 205 TIDGFSLVQSLRACRNQVARAAASGSDAMQAPPLAYKKWALQEQESISDHVACGVSTPNA 264
Query: 204 YGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVG----AIL 259
+ A A++ G + S + VT G + F E ++ ++ A+
Sbjct: 265 FDQLASASMYGGYNASIRSTPPSSHLY--VTSGTWPFNAFFYAVEGSAQPMLSDVAHAVA 322
Query: 260 SKVVPATFSTISSLSKMIWR-----SEQSPKKSEPKPQSFARASPLTC-LKDHPRKGERL 313
SK+ A FS IS+ S + +E + ++ +PK + A A PL L D R+GE+L
Sbjct: 323 SKLKSALFSQISAASGWLGLGGTSGAESTQREKKPKIEP-ATALPLRFGLYDKRRQGEKL 381
Query: 314 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYA- 372
LSP+G L A TDS GR++L+D V VR+WKGYRDA F+ M +D T A +
Sbjct: 382 CLSPNGLLLATTDSFGRVILVDVTRGVAVRMWKGYRDAQLAFVAM--TEDQLTERASRSQ 439
Query: 373 PVKSDYCLCLAIHAPRKGIIE 393
P++ L L I+APR+GI+E
Sbjct: 440 PLRR--ALFLVIYAPRRGILE 458
>gi|432106275|gb|ELK32161.1| Rab3 GTPase-activating protein non-catalytic subunit, partial
[Myotis davidii]
Length = 1470
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 149/345 (43%), Gaps = 57/345 (16%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ +G + G Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 96 IVLGFTSGSVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 155
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 156 IVTIDGFSLFQSLR--------ACRNQVAKAAASGNENIQPPPLAYKKWGLQDVDTIVDH 207
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G + F E ++ L+
Sbjct: 208 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLL 267
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC------ 302
A+ SK+ A F+ S + W+S E++ +K +PK + A+PL
Sbjct: 268 SHVALAVASKLTSALFNAASGW--LGWKSRHEEEAVQKQKPKMEP---ATPLAVRQVGHA 322
Query: 303 --------LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354
L D R GE + LSP SLAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 323 LLKLGWFGLPDSRRHGESICLSPCNSLAAVTDDFGRVILLDVTRGIAIRMWKGYRDAQIG 382
Query: 355 FMEMLVN-----KDAATSSAYYAPV-KSDYCLCLAIHAPRKGIIE 393
+++++ + + S + +P S L I+APR+GI+E
Sbjct: 383 WVQVVEDLHERVPEKGDPSPFGSPQGPSRVAQFLVIYAPRRGILE 427
>gi|157123799|ref|XP_001653918.1| hypothetical protein AaeL_AAEL009668 [Aedes aegypti]
gi|108874202|gb|EAT38427.1| AAEL009668-PA [Aedes aegypti]
Length = 1381
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/317 (25%), Positives = 134/317 (42%), Gaps = 37/317 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
+ VG G L Y G L+H QL H + ++ + + EE+ V P +
Sbjct: 127 IVVGLDSGQVLFYGENGTLIHSQLFHQEPVQAIKAQSGKH------INEELYVFHPSCVV 180
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
G+++ +L R + + P+ +S+ E + + WN K DA +
Sbjct: 181 IIQGAQLFPLL-RSLKQQIGRYGLGSPRVNESQ------EVIACRKWNYGKNMTVQDAVV 233
Query: 213 TGLMPP----PLMEVQSSQRYFCAVTIG--EDSVISAFRLS-----EDRSRSLVGAILSK 261
G L+ +F ++S+I A + +L+
Sbjct: 234 VGPQKTCTFDHLLTASLEGGFFAKYRHAPPQNSLIVAAGMKPYIGFHYAKEGFTQPVLAD 293
Query: 262 VVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPS 318
V A S I S + W S ++ +PQ + PL C L D R + L+P+
Sbjct: 294 VARAVASKIKS-ALPSWFGGSSAPQTPQEPQ-LPPSEPLICRFGLCDIQRNAFSVWLAPN 351
Query: 319 GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD- 377
+LAA+ D+LGRI+L+D + +R+WKGYRDA C F+E+ A A A K D
Sbjct: 352 YTLAAVADNLGRIILVDCMKGIALRIWKGYRDAQCGFVEV------AEKQAKDAVTKQDR 405
Query: 378 -YCLCLAIHAPRKGIIE 393
+ L I+APR+ ++E
Sbjct: 406 RKAMFLVIYAPRRSVLE 422
>gi|52218910|ref|NP_001004528.1| rab3 GTPase-activating protein non-catalytic subunit [Danio rerio]
Length = 1270
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 146/329 (44%), Gaps = 51/329 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG S GY Y +L+H +L+L+ R R EE+ ++ P
Sbjct: 156 IVVGFSSGYVRFYT--------ELLHEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAA 207
Query: 151 LARFDGSEIQKMLQRWFQD------SNSNFWDQKP---KQRDSEDLENSYERLPHQLWNV 201
L DG + + L+ + S+ P K+ +D++ + + +
Sbjct: 208 LVTIDGFSLFQSLRACRNQVARAAAAGSDVIQPPPLAYKKWGLQDMDTIADHSSIGITTL 267
Query: 202 SKYGPCADAAITGLM------PPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLV 255
S + +A+I G PP M +Y +T+G F E S+ L+
Sbjct: 268 SVFDQMKNASILGGFHASVKGSPPAMS-----QY---ITVGGGPYTGFFYAIEGSSQPLL 319
Query: 256 G----AILSKVVPATFSTISSLSKMIWRS---EQSPKKSEPKPQSFARASPLTC-LKDHP 307
A+ SK+ A FS S + W+S E+S +K +PK + A A P+ L D
Sbjct: 320 SHVALAVASKLTSALFSAASGW--LGWKSKNEEESVQKQKPKVEP-ATALPVRFGLPDSR 376
Query: 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM---EMLVNKDA 364
R GE + LSP ++A +TD GR+ LLD + +R+WKGYRDA ++ E +D
Sbjct: 377 RHGESICLSPCNTMAGVTDDFGRVTLLDVARGIAIRMWKGYRDAQLGWVQVSEARGERDI 436
Query: 365 ATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
ATS + + + L I+APR+GI+E
Sbjct: 437 ATSPS----MPRRHAQFLVIYAPRRGILE 461
>gi|312375310|gb|EFR22708.1| hypothetical protein AND_14323 [Anopheles darlingi]
Length = 1394
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 132/323 (40%), Gaps = 38/323 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
+ VG G L Y G LVH Q+ H I L+ + + EE+ V+ P
Sbjct: 107 IIVGLDSGLVLFYGETGTLVHSQIFHQEPIQALKAQSGKH------INEELYVMYPSCTV 160
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
GS++ +L+ Q N + PK +++ E + + W+ K DA +
Sbjct: 161 ILQGSQVFPLLRSLRQQIN-RYGAGSPKVNEAQ------ETIACRKWSYEKGMTIVDAVV 213
Query: 213 TGLMPP----PLMEVQSSQRYFCA-----------VTIGEDSVISAFRLSEDRSRSLVGA 257
G L+ +F V G + E ++ L+
Sbjct: 214 VGPQKSCTFDHLLTASLEGGFFAKYRHAAPQNSLIVATGTKPYVGFHYAKEGFTQPLLAD 273
Query: 258 ILSKVVPATFSTISS-LSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERL 313
+ V S + S L S Q +EP+ + PL C L D R +
Sbjct: 274 VARAVASKIKSALPSWLGGGGGSSAQQQAAAEPQ---LPPSEPLICRFGLCDLQRNAFAV 330
Query: 314 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM---LVNKDAATSSAY 370
L+P+ LAA+ D+LGRI+L+D Q + +R+WKGYRDA C F+E+ L + + +
Sbjct: 331 WLAPNYQLAAVADNLGRIILVDCQRGIALRIWKGYRDAQCGFVEVPEKLPKESSTATGGS 390
Query: 371 YAPVKSDYCLCLAIHAPRKGIIE 393
V L L I+APR+ ++E
Sbjct: 391 SRKVDRRRALFLIIYAPRRSVLE 413
>gi|281210020|gb|EFA84188.1| hypothetical protein PPL_03263 [Polysphondylium pallidum PN500]
Length = 602
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 79 ITAIEWLVFEE---MRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGS--RRD 133
ITAI L +A+A+G + G+ ++ L G+L+ QL H I K++V+ +
Sbjct: 172 ITAISILTLSNPQLEQAIAIGYTSGHLRIFSLHGNLLLSQLFHKAPIQKIKVKMTPILTS 231
Query: 134 LTQDTAEEEVCVVMPG-VLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYE 192
+ +EV ++ PG ++A G + +L +Q + + + +
Sbjct: 232 SQERYVMQEVSILYPGNIVASMAGGSLSGVLAVCYQ-----------QVQRGDTASAAQT 280
Query: 193 RLPHQLWNVSKYGPCADAAITG-LMPPPLMEV---QSSQRYFCAVTIGEDSVISAFRLSE 248
+L + W++ D + G + P + S + G D +++ + S+
Sbjct: 281 KLDFRKWSLGSIDVANDFSFAGPFLGSPFRALPYGTSEHAMTRLIVAGSDPMLAYYYPSD 340
Query: 249 DRSRSLVGAI--LSKVVPATFSTISSLSKMIW-------------RSEQSPKKSEPKPQS 293
D S A+ +S V + + S +K W + E + K+ E K ++
Sbjct: 341 DSGSSFTVAVALVSSVAAKLTNAVYSFAKNWWGGSQQSQQQQQQQQQEANAKQQESKIEN 400
Query: 294 FARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350
SPL L D R+ + L + PSG A TD+LGR+LL+D ++VR+WKGYRD
Sbjct: 401 ---PSPLQVRWSLIDEKRELKSLLMDPSGRYAVATDNLGRVLLVDIVNSLIVRMWKGYRD 457
Query: 351 ASCVFMEML 359
C ++ L
Sbjct: 458 CQCGWINQL 466
>gi|390361477|ref|XP_790581.3| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Strongylocentrotus purpuratus]
Length = 1531
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 139/345 (40%), Gaps = 61/345 (17%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE--EEVCVVMPGV 150
+ +G + GY +Y G L+ QL+H +LKL+ R AE EE+ ++ P
Sbjct: 164 VVLGFTSGYVRMYTETGSLLLSQLLHEDPVLKLKGRTYEMPRHAGVAEQQEELTILYPTA 223
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
L DG + + L+ +Q K S L ++ W + + D
Sbjct: 224 LVTVDGFSLFQSLRAC--------RNQLAKAAASGSDNILPPPLAYKKWGLQQQDAIVDH 275
Query: 211 AITGLM-----------------------PPPLMEVQSSQRYFCAVTIGEDSVISAFRLS 247
TG++ PP+ +Y +T G + F
Sbjct: 276 ISTGVVTSYSFDQLHAASTLGGYNASIKKSPPI-----CHKY---ITTGAGPFLGFFYAL 327
Query: 248 EDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCL 303
E ++ L A+ SK+ A FS S ++Q+ P S R P L
Sbjct: 328 EGSAQPLFSDVALAVASKLKSAIFSAASGWFGF-GGNKQTTDTPAPSKTSKPRVEPAISL 386
Query: 304 K------DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 357
D R G+ + L+P LAA TDS GR+ L+D V VR+WKGYRDA C +++
Sbjct: 387 PIRFGLPDVRRHGDTIVLAPGMRLAASTDSFGRVSLIDVTRGVAVRMWKGYRDAQCGWIQ 446
Query: 358 ML--VNKDAATSSAYYAPVKSD-------YCLCLAIHAPRKGIIE 393
++ ++++ + P S L L I+APR+GIIE
Sbjct: 447 VIEDIHRERTSEHGSKRPRHSTDSKHGPRVALFLVIYAPRRGIIE 491
>gi|347966108|ref|XP_551287.4| AGAP001533-PA [Anopheles gambiae str. PEST]
gi|333470207|gb|EAL38577.4| AGAP001533-PA [Anopheles gambiae str. PEST]
Length = 1374
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 139/327 (42%), Gaps = 50/327 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
+ VG G L Y G L+H Q H + ++ + + EE+ V P
Sbjct: 107 IMVGLDDGQVLFYGENGTLIHSQTFHQEPVQAIKAQSGKH------INEELYVQHPSCTV 160
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
G+++ +L+ Q N + PK +++ E + W+ K DA +
Sbjct: 161 ILQGAQVFPLLRSLRQQIN-RYGIGSPKVNEAQ------ETFACRKWSYEKGMTIVDAVV 213
Query: 213 TGLMPPPLMEVQSSQRYFCAVTIG-EDSVISAFRLSEDRSRSLVGA-------------- 257
G Q S Y +T E + +R + ++ ++ A
Sbjct: 214 VG--------PQKSCTYDHLLTASLEGGFFAKYRHAAPQNSLIIAAGSKPYVGFHYAKEG 265
Query: 258 ----ILSKVVPATFSTI-SSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRK 309
+L+ V A S I S+L + +++ +PQ + PL C L D R
Sbjct: 266 FTQPVLADVARAVASKIKSALPSWLGGGASVQQQTAAEPQ-LPPSEPLICRFGLCDLQRN 324
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 369
+ L+P+ LAA+ D+LGR++L+D Q + +R+WKGYRDA C F+E+ +SSA
Sbjct: 325 AFAVWLAPNYQLAAVADNLGRVILVDCQRGIALRIWKGYRDAQCGFVEVAEKLPKESSSA 384
Query: 370 YYAP---VKSDYCLCLAIHAPRKGIIE 393
AP + L L I+APR+ ++E
Sbjct: 385 --APGRKMDRRKALFLVIYAPRRSVLE 409
>gi|167515826|ref|XP_001742254.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778878|gb|EDQ92492.1| predicted protein [Monosiga brevicollis MX1]
Length = 1314
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 42/316 (13%)
Query: 96 GTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFD 155
GT+RGY V G+ + Q++H ++++ + + L ++ ++ P + D
Sbjct: 152 GTNRGYLHVLRHNGERILCQMLHDAPVVRITQQPGKGPLN------DLALLYPDAVVIID 205
Query: 156 GSEIQK-MLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITG 214
G + + +L R QDS S + K+ ED +N +++ GP +
Sbjct: 206 GLSLARTVLGRIHQDSESEA-TLEVKKYGLEDQDNCR--------DIACCGPSLASDYDH 256
Query: 215 LMPPPLMEVQSSQRYFCA-VTIGEDSVISAFR-LSEDRSRSLVGAILSKVVPATFSTISS 272
LM + + CA + G +++ + L DR S V A+ + + + S
Sbjct: 257 LML--YAARHAEHQEMCAYIVAGASPMLAKYTTLGVDRPFSTVAALATSMATQFSKAMFS 314
Query: 273 LSKMIWRSEQSPKKSEPK------------PQSFARASPL---TCLKDHPRKGERLTLSP 317
+ W + KS+ K P + A+PL + L D R+ RL+LSP
Sbjct: 315 MVNSFWGGSSTAAKSQSKAPAESSDPSEVPPSAREPATPLPMASSLSDAKREFLRLSLSP 374
Query: 318 SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD 377
L A D+LGR+ LLD L VR+WKGYRDA + K+ A A A
Sbjct: 375 DQRLLAAADNLGRVFLLDVATLSAVRMWKGYRDAEVAWHVSEPMKERAGPMALRA----- 429
Query: 378 YCLCLAIHAPRKGIIE 393
+ L I+APR+G +E
Sbjct: 430 --MFLIIYAPRRGQVE 443
>gi|149040952|gb|EDL94909.1| rCG20240, isoform CRA_a [Rattus norvegicus]
Length = 1357
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 133/328 (40%), Gaps = 64/328 (19%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ R+L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTESGVLLLAQLLNEDRVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGE 311
A+ SK+ A FS AR L D R GE
Sbjct: 327 SHVALAVASKLTSALFSA-------------------------ARFG----LPDSRRHGE 357
Query: 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATSSAY 370
+ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 358 SICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIVEDLHERVPEKGD 417
Query: 371 YAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 418 FSPFGNTQGPSRVAQFLVIYAPRRGILE 445
>gi|170029981|ref|XP_001842869.1| Rab3 GTPase-activating protein regulatory subunit [Culex
quinquefasciatus]
gi|167865329|gb|EDS28712.1| Rab3 GTPase-activating protein regulatory subunit [Culex
quinquefasciatus]
Length = 1287
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
+ VG G L Y G L+H QL H + ++ + + EE+ V
Sbjct: 106 IVVGLDNGQVLFYGENGTLIHSQLFHQEPVQAIKAQSGKH------INEELYVFYASCAV 159
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
G+++ +L R + + P+ +++ E + + W+ K D+ +
Sbjct: 160 IIHGAQLFPLL-RSLKQQIGRYGVGSPRVNEAQ------EVIACRKWSYGKSMTVQDSVV 212
Query: 213 TGLMPP----PLMEVQSSQRYFCAVTIG--EDSVISAFRLS-----EDRSRSLVGAILSK 261
G L+ +F ++S+I A + +L+
Sbjct: 213 VGPQKTCTFDHLLTASLEGGFFAKYRHAPPQNSLIVAAGMKPYIGFHYAKEGFTQPVLAD 272
Query: 262 VVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPS 318
V A S I S + S ++ P+PQ + L C L D PR + L+P+
Sbjct: 273 VARAVASKIKSALPSWFGGSSSTPQTPPEPQ-LPPSEALICRFGLCDLPRSAFSVWLAPN 331
Query: 319 GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD- 377
SLAA+ D+LGR++L+D + +R+WKGYRDA C F+E+ A A + VK D
Sbjct: 332 YSLAAVADTLGRVILIDCAKGIALRIWKGYRDAQCGFVEV------AEKVAKDSVVKQDR 385
Query: 378 -YCLCLAIHAPRKGIIE 393
L L I+APR+ ++E
Sbjct: 386 RKALFLVIYAPRRSVLE 402
>gi|148681126|gb|EDL13073.1| mCG12392 [Mus musculus]
Length = 1357
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 133/328 (40%), Gaps = 64/328 (19%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ ++L+L+ R R EE+ ++ P
Sbjct: 155 IVVGFTSGYVRFYTESGVLLLAQLLNEDKVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 214
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 215 IVTIDGFSLFQSLRA--------CRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 266
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ F A +T+G F E ++ L+
Sbjct: 267 ASIGIMTLSPFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 326
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGE 311
A+ SK+ A FS AR L D R GE
Sbjct: 327 SHVALAVASKLTSALFSA-------------------------ARFG----LPDSRRHGE 357
Query: 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-KDAATSSAY 370
+ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 358 SICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQVGWIQIVEDLHERVPEKGG 417
Query: 371 YAPV-----KSDYCLCLAIHAPRKGIIE 393
++P S L I+APR+GI+E
Sbjct: 418 FSPFGNTQGPSRVAQFLVIYAPRRGILE 445
>gi|291225161|ref|XP_002732569.1| PREDICTED: rCG20240-like, partial [Saccoglossus kowalevskii]
Length = 459
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 135/327 (41%), Gaps = 60/327 (18%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE--EEVCVVMPGV 150
+ VG + G +Y G L+ QL+H R+LKL+ R AE EE+ ++ P
Sbjct: 148 IMVGFTSGCIRMYTENGALLISQLLHEERVLKLKCRTYELPRHSGIAEQIEELTILYPKA 207
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
L DG + + L+ +Q + S L ++ W + + D
Sbjct: 208 LVTIDGFSLFQSLR--------ACRNQVARAAASGSDVIQLPPLAYKKWGLQEQERITDH 259
Query: 211 AITGLMPP---PLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
G++ P ME S + A +T G + + E ++ L+
Sbjct: 260 VSAGVITPCSFNQMETASILGGYKASIKTSPPAASKYLTTGIGPFVGVYYALEGSTQPLL 319
Query: 256 ----GAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGE 311
A+ SK+ A FS S+ AR L D R G+
Sbjct: 320 SDVAAAVASKLKSALFSQFSA----------------------ARFG----LPDLRRHGD 353
Query: 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN----KDAATS 367
+TLSPS +LA TDS GR++L+D +R+WKGYRDA C ++++L + DA
Sbjct: 354 SITLSPSRTLAVTTDSFGRVILIDVNRGHALRMWKGYRDAQCGWIQVLEDVSDKVDAGLK 413
Query: 368 SAYYAPVKSD-YCLCLAIHAPRKGIIE 393
+ + L L I+APR+GI+E
Sbjct: 414 RRHRGKSYTGRVALFLVIYAPRRGIVE 440
>gi|410925973|ref|XP_003976453.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Takifugu rubripes]
Length = 1280
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 142/329 (43%), Gaps = 53/329 (16%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE--EEVCVVMPGV 150
+ VG + GY Y +L+ +L+L+ R L E EE+ ++ P
Sbjct: 156 VVVGFTTGYVRFYT--------ELLQEDPVLRLKCRTYEIPLHPGITEQHEELSILYPTA 207
Query: 151 LARFDGSEIQKMLQRWFQD------SNSNFWDQKP---KQRDSEDLENSYERLPHQLWNV 201
L DG + + L+ + S+ P K+ +D++ + + +
Sbjct: 208 LVTIDGFSLFQSLRACRNQVARAAAAGSDVIQPPPLAYKKWGLQDMDTIVDHSSVGIMTL 267
Query: 202 SKYGPCADAAITGLM------PPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLV 255
+ +A+I G PP M + V++G I + E S+ L+
Sbjct: 268 CVFDQMKNASILGGFNASVKGSPPAMSL--------YVSVGGGPYIGFYYAVEGSSQPLL 319
Query: 256 G----AILSKVVPATFSTISSLSKMIWR----SEQSPKKSEPKPQSFARASPLTC---LK 304
A+ SK+ A F+ S + W E++ +K +PK + A+PL L
Sbjct: 320 SHVALAVASKLTSALFNAASGW--LGWNKNRSEEETVQKQKPKVEP---ATPLGIRFGLP 374
Query: 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDA 364
D R GE + LSP LA +TD GR+ LLD + +R+WKGYRDA ++++ +
Sbjct: 375 DSRRHGESICLSPCNMLAGVTDDFGRVALLDLARGICIRMWKGYRDAQLGWLQVQEERGD 434
Query: 365 ATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
SS+ + + L L I+APR+GI+E
Sbjct: 435 HDSSS----LPKRHALFLVIYAPRRGILE 459
>gi|198416987|ref|XP_002121049.1| PREDICTED: similar to rab3 GTPase-activating protein, non-catalytic
subunit [Ciona intestinalis]
Length = 1369
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 89/333 (26%), Positives = 139/333 (41%), Gaps = 51/333 (15%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLT--QDTAE--EEVCVVMP 148
+ VG S GY +Y G L+ QL+H +++L R + T ++AE +E+ ++
Sbjct: 149 VVVGFSTGYVRMYTETGSLIISQLLHEIPVVQLNCRTYEGNKTSHNNSAEVGDELTILYN 208
Query: 149 GVLARFDGSEIQKMLQRWFQD------SNSNFWDQKPKQRDSEDLENSYERLPHQLWNVS 202
L DG + + L+ S D P L ++ W +
Sbjct: 209 DTLIVIDGFSLFQTLRACRNQVALAAASGMTSIDPPP--------------LSYKKWILR 254
Query: 203 KYGPCADAAITG---LMPPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLS 247
GP G L P M S F A VT+G +
Sbjct: 255 GLGPIKSHVSPGTIVLNPFDQMHTASILGGFNATVSTNLPTMSQYVTVGTSPFVGFSYAL 314
Query: 248 EDRSRSLVG----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPL--- 300
+ S+ L+ A+ SK+ A F+ S ++ S +S+ KP+ +PL
Sbjct: 315 DGTSQPLLSHVALAVASKLKSALFNAASGWLSWGKGAKPSEDQSKQKPK-VELGTPLDIR 373
Query: 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV 360
+ L D R+G + L+PS L A TDS GR++LLD +R+WKGYRDA F+
Sbjct: 374 SGLPDLRRQGHSIVLAPSAWLGATTDSFGRVMLLDLNKGYALRIWKGYRDAQIAFVRS-- 431
Query: 361 NKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ D +P +S L L I+APR+G++E
Sbjct: 432 HDDTQKHRHSSSPPRS--ALFLVIYAPRRGLLE 462
>gi|440897527|gb|ELR49190.1| Rab3 GTPase-activating protein non-catalytic subunit [Bos grunniens
mutus]
Length = 1334
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 133/328 (40%), Gaps = 64/328 (19%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR--RDLTQDTAEEEVCVVMPGV 150
+ VG + GY Y G L+ QL++ +L+L+ R R EE+ ++ P
Sbjct: 167 IVVGFTSGYVRFYTENGVLLLAQLLNEDSVLQLKCRTYEIPRHPGVTEQNEELSILYPAA 226
Query: 151 LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADA 210
+ DG + + L+ +Q K S + L ++ W + D
Sbjct: 227 IVTIDGFSLFQSLRACR--------NQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDH 278
Query: 211 AITGLM---PPPLMEVQSSQRYFCA------------VTIGEDSVISAFRLSEDRSRSLV 255
A G+M P M+ S+ + A +T+G F E ++ L+
Sbjct: 279 ASIGIMTLSPFDQMKTASNIGGYNAAIKNSPPAMSQYITVGSSPFTGFFYALEGSTQPLL 338
Query: 256 G----AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGE 311
A+ SK+ A F+ AR L D R GE
Sbjct: 339 SHVALAVASKLTSALFNA-------------------------ARFG----LPDSRRHGE 369
Query: 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVN-----KDAAT 366
+ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ + +
Sbjct: 370 SICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQTGWIQIVEDLHERVPEKGD 429
Query: 367 SSAYYAPV-KSDYCLCLAIHAPRKGIIE 393
S + +P S L I+APR+GI+E
Sbjct: 430 FSPFGSPQGPSRVAQFLVIYAPRRGILE 457
>gi|195035401|ref|XP_001989166.1| GH10197 [Drosophila grimshawi]
gi|193905166|gb|EDW04033.1| GH10197 [Drosophila grimshawi]
Length = 1336
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 148/363 (40%), Gaps = 47/363 (12%)
Query: 52 TVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDL 111
T +NW +I L I T +EW +AVG + G + Y G
Sbjct: 67 TYALNWCGELDDGNQIVTSLLCIPMMRATDVEW------TCIAVGLASGMVIFYTDAGVK 120
Query: 112 VHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSN 171
+ Q +L +++ R A + +V G + +G +I +L +
Sbjct: 121 LFSQCCQEDSVLGIKLLSPPR---HSEANALLYIVYSGCMCFINGEDILPILANCRHNQQ 177
Query: 172 SNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLME--VQSS--Q 227
+++ + Y+ +N + DAAI+ P + VQ S
Sbjct: 178 RGAFERSGFPSADVVAFHKYK------FNRERESILNDAAISTNQRAPTYDYIVQQSIAH 231
Query: 228 RYFCAV-----------TIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKM 276
YF V G + + F E +G + V+ + +L
Sbjct: 232 GYFAKVQATPVRSAQVIVAGAEPYLGFFHAEEGYKTVSLGEVAKDVLGMAYK---NLMGG 288
Query: 277 IWRSEQSPKKSEPKPQSF---ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGR 330
I+R ++P ++ +P+ ++ +P+ L D R G L L+P G LAA+TD+L R
Sbjct: 289 IFR--RAPDQAAEQPEQLPLPSKEAPMRTRCRLYDGKRDGLSLILAPGGKLAAVTDNLDR 346
Query: 331 ILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKG 390
++L+DTQ +++R+WKGYRDA C F+ K+ + K+ L L I+APR G
Sbjct: 347 VMLVDTQQAIILRVWKGYRDAQCAFVP---TKERSVRGIKTHKRKA---LFLVIYAPRMG 400
Query: 391 IIE 393
++
Sbjct: 401 CLD 403
>gi|195472301|ref|XP_002088439.1| GE12457 [Drosophila yakuba]
gi|194174540|gb|EDW88151.1| GE12457 [Drosophila yakuba]
Length = 1341
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/337 (25%), Positives = 139/337 (41%), Gaps = 52/337 (15%)
Query: 81 AIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE 140
AIEW +AVG S G + Y G + Q ++ ++++ + R A+
Sbjct: 100 AIEW------TCVAVGLSSGMVIFYTDSGVKLFSQCCQEDPVIGVKLQSAPR---HSEAD 150
Query: 141 EEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSY---ERLPHQ 197
+ +V P L G +I L + QR + D SY + +P Q
Sbjct: 151 SLLYIVYPRCLCFIQGQDILPTLSNCRHNV----------QRGALD-RGSYPTADVVPFQ 199
Query: 198 LWNV--SKYGPCADAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSV 240
+ + DAAI+ PP + Q YF V G +
Sbjct: 200 KYKFKQEREAVINDAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSQVLAAGAEPY 259
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFAR 296
+ F+ E +G + V+ + + L + R+ + SP++S P P A
Sbjct: 260 LGFFQAEEGYKTMSLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAP 317
Query: 297 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
L D R G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+
Sbjct: 318 MRIRCRLYDGKRDGLTLAVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFV 377
Query: 357 EMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ K+ + K+ L L I+APR G ++
Sbjct: 378 PV---KEKSVRGIKTHKRKA---LFLVIYAPRMGCLD 408
>gi|290989319|ref|XP_002677285.1| predicted protein [Naegleria gruberi]
gi|284090892|gb|EFC44541.1| predicted protein [Naegleria gruberi]
Length = 374
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 41/312 (13%)
Query: 95 VGTSRGYFLVYDLKGD-LVHRQLIHPGRILKLRVRGSRRD-LTQDTAEEEVCVVMPGVLA 152
+G+S GY +YD++ D ++ + H I+K+R + + L + +E + ++ P +
Sbjct: 2 IGSSEGYLRIYDVQQDKIIREERFHDLEIVKIRSQSVFHNTLLPNFQKEIILIIYPNHVI 61
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAA- 211
D ++K L + P D +DLE ++ WN+ ++ DA
Sbjct: 62 TIDPLHLKKELN-----------SENPSM-DLDDLE-------YKKWNLQEFAKLNDACC 102
Query: 212 -ITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSED-----RSRSLVGAILSKVVPA 265
+ + EV + F V +G+ S ++ + + + R R+ V I ++V
Sbjct: 103 LYSHCSDSSIFEVMEEKSEFDIVAVGK-STLALYSTANEIVEYVRKRTRVKKIATQVASK 161
Query: 266 TFSTISSLSKMIWRSEQSPKKSEPKPQSFARAS---PLTC-LKDHPRKGERLTLSPSGSL 321
+S S+ S +W + ++ + P++ D R+ L +G
Sbjct: 162 VYSLASNYSSWLWGGNKEVEQPSEPEEPEILPGTRIPISNRFIDEKREIFHADLDYTGKY 221
Query: 322 AAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381
A +DSLGRIL+ D + V++++KGYR+A C + + S +
Sbjct: 222 LATSDSLGRILIFDLSTMTVMKVFKGYREAHCYWFFTGSEPENMNSESNIE--------L 273
Query: 382 LAIHAPRKGIIE 393
L I APR+GI+E
Sbjct: 274 LLIFAPRRGILE 285
>gi|380027148|ref|XP_003697293.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 2 [Apis florea]
Length = 1365
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 299 PLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVF 355
P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + +R+WKGYRDA C +
Sbjct: 339 PMTCRFGLSDVTREGYSIISSPNKALSVILDAMGRVLLIDNKCCIAIRMWKGYRDAQCGW 398
Query: 356 MEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGIIE 393
+E+ K + A+ ++ L I+AP+KGII+
Sbjct: 399 IEVEEEKHSGMHKAFIKFKQTPQLRSAFFLVIYAPKKGIID 439
>gi|198475767|ref|XP_001357151.2| GA20070 [Drosophila pseudoobscura pseudoobscura]
gi|198137950|gb|EAL34218.2| GA20070 [Drosophila pseudoobscura pseudoobscura]
Length = 1351
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 95/208 (45%), Gaps = 27/208 (12%)
Query: 205 GPCADAAITGLMPPPLME--VQSS--QRYFCAV-----------TIGEDSVISAFRLSED 249
G DAAI+ PP + VQ S Y+ V G + + F E
Sbjct: 209 GIINDAAISSTQRPPTYDYIVQQSIGHGYYAKVHATPPRSSQVLAAGAEPYLGFFHAEEG 268
Query: 250 RSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF-ARASPLTC---LKD 305
+G + V+ ++ + L + R+ P+ E P + +P+ L D
Sbjct: 269 YKTVSLGEVAKGVIGLAYNNL--LGGLFKRAPGPPQTPEDAPLPLPTKEAPMRIRCRLYD 326
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA 365
R G L ++P G LA +TD+L R++++DTQ +++R+WKGYRDA C F+ + K+ +
Sbjct: 327 GKRDGLTLAIAPGGRLAVVTDNLDRVMMVDTQQAIILRVWKGYRDAQCAFVPV---KEKS 383
Query: 366 TSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
K+ L L I+APR G ++
Sbjct: 384 VRGIKTHKRKA---LFLVIYAPRMGCLD 408
>gi|380027146|ref|XP_003697292.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like isoform 1 [Apis florea]
Length = 1416
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 61/101 (60%), Gaps = 6/101 (5%)
Query: 299 PLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVF 355
P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + +R+WKGYRDA C +
Sbjct: 339 PMTCRFGLSDVTREGYSIISSPNKALSVILDAMGRVLLIDNKCCIAIRMWKGYRDAQCGW 398
Query: 356 MEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGIIE 393
+E+ K + A+ ++ L I+AP+KGII+
Sbjct: 399 IEVEEEKHSGMHKAFIKFKQTPQLRSAFFLVIYAPKKGIID 439
>gi|432940969|ref|XP_004082764.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Oryzias latipes]
Length = 1343
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 76/142 (53%), Gaps = 9/142 (6%)
Query: 257 AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQ-SFARASPLTC---LKDHPRKGER 312
A+ SK+ A FS S + W ++ + S PK + A+PL L D R GE
Sbjct: 401 AVASKLTSALFSAASGW--LGWNKSKTEEDSTPKQRPKVEPATPLGIRFGLPDSRRHGES 458
Query: 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK-DAATSSAYY 371
+ LSP +LA +TD GR+ LLD + +R+WKGYRDA ++++ + D S
Sbjct: 459 ICLSPCNTLAGVTDDFGRVTLLDLARGISIRMWKGYRDAQLGWLQVREERGDRDFSPTGS 518
Query: 372 APVKSDYCLCLAIHAPRKGIIE 393
P + + L L I+APR+GI+E
Sbjct: 519 MPRR--HALFLIIYAPRRGILE 538
>gi|307198625|gb|EFN79470.1| Rab3 GTPase-activating protein non-catalytic subunit [Harpegnathos
saltator]
Length = 1236
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 278 WRSEQSPKKSEPKPQSFARAS--PLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRIL 332
+RS SE +S S +TC L D R+G+ +T SP+ L+ I+D++GR++
Sbjct: 273 FRSSSKTATSEATSKSNIHESIETMTCRFGLSDIMREGDCITCSPNKVLSVISDAMGRVI 332
Query: 333 LLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRK 389
L++ + + VR+WKGYRDA C ++E+ KD P++ + L I+AP+K
Sbjct: 333 LINNKKGIAVRMWKGYRDAQCGWIEVNEEKDRGIHKNINRPMQKTLLRTTMFLVIYAPKK 392
Query: 390 GIIE 393
G+I+
Sbjct: 393 GVID 396
>gi|195160026|ref|XP_002020877.1| GL14134 [Drosophila persimilis]
gi|194117827|gb|EDW39870.1| GL14134 [Drosophila persimilis]
Length = 1351
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 94/208 (45%), Gaps = 27/208 (12%)
Query: 205 GPCADAAITGLMPPPLME--VQSS--QRYFCAV-----------TIGEDSVISAFRLSED 249
G DAAI+ PP + VQ S Y+ V G + + F E
Sbjct: 209 GIINDAAISSTQRPPTYDYIVQQSIGHGYYAKVHATPPRSSQVLAAGAEPYLGFFHAEEG 268
Query: 250 RSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF-ARASPLTC---LKD 305
+G + V+ ++ + L + R+ P E P + +P+ L D
Sbjct: 269 YKTVSLGEVAKGVIGLAYNNL--LGGLFKRAPGPPPTPEDAPLPLPTKEAPMRIRCRLYD 326
Query: 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAA 365
R G L ++P G LA +TD+L R++++DTQ +++R+WKGYRDA C F+ + K+ +
Sbjct: 327 GKRDGLTLAIAPGGRLAVVTDNLDRVMMVDTQQAIILRVWKGYRDAQCAFVPV---KEKS 383
Query: 366 TSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
K+ L L I+APR G ++
Sbjct: 384 VRGIKTHKRKA---LFLVIYAPRMGCLD 408
>gi|348677663|gb|EGZ17480.1| hypothetical protein PHYSODRAFT_504554 [Phytophthora sojae]
Length = 1419
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 142/347 (40%), Gaps = 63/347 (18%)
Query: 77 EYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQ 136
E + ++WL + AVG + G ++ G L+ Q +H +LKL
Sbjct: 105 ERVADVKWL---DRELFAVGYTSGVVRLFSRVGKLLFEQKLHGAAVLKL----------- 150
Query: 137 DTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPH 196
D +V P + SE + W ++S + + S+ NS P
Sbjct: 151 DVNRNAATMVAPRRASVLLASEPDTEGEFWVLYADSTVAIIQISEILSK--LNSAVFGPG 208
Query: 197 QLWNVSKYGPCADAAITGLMP-----PPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRS 251
Q KY I +P P + + + + V+ G+ ++ ++ D++
Sbjct: 209 QASKFRKYSLRDQKEIVAAVPCGPVRPTIFQSHARLGVYTIVSAGQAPFLAFYQAGNDQN 268
Query: 252 R-----SLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPL------ 300
+ AI S+ A ++ +S W + +SE + A + L
Sbjct: 269 SIIHLAHIATAIASRAAGAVWNFATS-----WGWGRGAGESEEQADGHAGYTQLGAGAID 323
Query: 301 --------------TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346
+ +D R+ L LSP+G LAA++D+LGRILL+DT ++V+R+WK
Sbjct: 324 AAAEHVPAPVGTTRSIYEDDRRRCRVLVLSPTGRLAAVSDTLGRILLVDTSRMIVIRMWK 383
Query: 347 GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
GYR+A C +M+ + A P L L I++ ++GI+E
Sbjct: 384 GYRNAQCGWMQ-------GSEGARRPP-----GLYLVIYSAQRGIVE 418
>gi|196014827|ref|XP_002117272.1| hypothetical protein TRIADDRAFT_61281 [Trichoplax adhaerens]
gi|190580237|gb|EDV20322.1| hypothetical protein TRIADDRAFT_61281 [Trichoplax adhaerens]
Length = 1289
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%), Gaps = 10/166 (6%)
Query: 233 VTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQ 292
++ G D V+ + ++D+ S ++S V + S + QS ++PK Q
Sbjct: 262 ISAGGDPVVGLYNAADDKIPSFASVVVSAVATKLKDAVLSAASGWLGFGQSTADAQPKVQ 321
Query: 293 --SFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347
+ SPL L D R +++ +P+ +LA D+L R+LL+DT+ + +R+WKG
Sbjct: 322 KPNIESGSPLDLRYGLPDDKRVVDKIIPAPNSALAVTVDNLARVLLIDTETGMAIRMWKG 381
Query: 348 YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
YRDA C ++++ T + S L L I+A R+GI+E
Sbjct: 382 YRDAQCGWIQVFEQHSNHTGNQ-----SSRRGLFLVIYAARRGILE 422
>gi|170580370|ref|XP_001895234.1| hypothetical protein Bm1_18885 [Brugia malayi]
gi|158597919|gb|EDP35936.1| hypothetical protein Bm1_18885 [Brugia malayi]
Length = 1100
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 305 DHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 363
D R+GER+ ++P LAA+TDSL R+ L+D + +VR+WKGYRDA C ++E + D
Sbjct: 397 DGKREGERIYMAPGKYKLAAVTDSLARVALIDIRTRHMVRMWKGYRDARCAWLEGMSTLD 456
Query: 364 AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S Y V+ L L I APR+G++E
Sbjct: 457 RKKSR-YELEVQPSTTLFLVIFAPRRGLLE 485
>gi|195578667|ref|XP_002079185.1| GD22135 [Drosophila simulans]
gi|194191194|gb|EDX04770.1| GD22135 [Drosophila simulans]
Length = 1339
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 138/337 (40%), Gaps = 52/337 (15%)
Query: 81 AIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE 140
AIEW +AVG G Y G + Q ++ ++++ + R A+
Sbjct: 100 AIEW------TCVAVGLCCGMVTFYTDTGVKLFSQCCQEDPVIGVKLQSAPR---HSEAD 150
Query: 141 EEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSY---ERLPHQ 197
+ +V P + G +I ML + QR + + SY + +P Q
Sbjct: 151 SLLYIVYPRCMCFIQGQDILPMLTNCRHNV----------QRGALE-RGSYPTADVVPFQ 199
Query: 198 LWNV--SKYGPCADAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSV 240
+ + DAAI+ PP + Q YF V G +
Sbjct: 200 KYKFKQEREAVINDAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSHVLAAGAEPY 259
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFAR 296
+ F+ E +G + V+ + + L + R+ + SP++S P P A
Sbjct: 260 LGFFQAEEGYKTMSLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAP 317
Query: 297 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
L D R G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+
Sbjct: 318 MRIRCRLYDGKRDGLTLAVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFV 377
Query: 357 EMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ K+ + K+ L L I+APR G ++
Sbjct: 378 PV---KEKSVRGIKTHKRKA---LFLVIYAPRMGCLD 408
>gi|393907320|gb|EJD74601.1| hypothetical protein LOAG_18108 [Loa loa]
Length = 1299
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 305 DHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 363
D R+GER+ ++P+ LAA+TDSL R+ L+D + +VR+WKGYRDA C ++E + D
Sbjct: 347 DGKREGERIYMAPAKYKLAAVTDSLARVALIDIRTRHMVRMWKGYRDARCAWLEGVSTLD 406
Query: 364 AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S Y V+ L L I APR+G++E
Sbjct: 407 RKKSR-YELEVQPSTALFLIIFAPRRGLLE 435
>gi|402582876|gb|EJW76821.1| hypothetical protein WUBG_12270, partial [Wuchereria bancrofti]
Length = 369
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 305 DHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 363
D R+GER+ ++P LAA+TDSL R+ L+D + +VR+WKGYRDA C ++E + D
Sbjct: 47 DGKREGERIYMAPGKYKLAAVTDSLARVALIDIRTRHMVRMWKGYRDARCAWLEGMSTLD 106
Query: 364 AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S Y V+ L L I APR+G++E
Sbjct: 107 RK-KSRYELEVQPSTTLFLVIFAPRRGLLE 135
>gi|328870099|gb|EGG18474.1| hypothetical protein DFA_03968 [Dictyostelium fasciculatum]
Length = 653
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/294 (22%), Positives = 127/294 (43%), Gaps = 44/294 (14%)
Query: 92 ALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVR-------GSRRDLTQDTAEEEVC 144
+A+G + GY ++ G+L+ QL H + K++++ S + +TQ E+
Sbjct: 220 VIAIGYTSGYLRIFSPHGNLLLSQLFHRLPVQKIKIKTTPILSLNSEKLITQ-----ELS 274
Query: 145 VVMPG-VLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSK 203
++ P ++A G + +LQ + + + + L + W++
Sbjct: 275 ILYPNNIVASMSGISLSTVLQVCYS-----------QILRGDSTTQAQANLDFKKWSLGS 323
Query: 204 YGPCADAAITG-LMPPPLMEV---QSSQRYFCAVTIGEDSVISAFRLSED--RSRSLVGA 257
D G + P + + V +G+D ++S + S+D S S+ A
Sbjct: 324 IEKTRDIVFCGPFLGSPFRALPYGTTENSIVRLVAVGKDPIVSFYYPSDDGGTSFSVAVA 383
Query: 258 ILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKP-----------QSFARASPLTC---L 303
++S V + + S +K W ++ + + Q PL+ +
Sbjct: 384 LVSSVAAKLTNAVYSFAKNWWGGGGQQQQQQQQSQQQQQSQQQQDQKIENPLPLSIRWSI 443
Query: 304 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 357
D R+ + + L PSG AA TD+LGR+LL+D V++++WKGYRD C +++
Sbjct: 444 MDEKRELQSIILDPSGRYAATTDNLGRVLLIDVINSVIIKVWKGYRDCQCAWIQ 497
>gi|195350987|ref|XP_002042018.1| GM26362 [Drosophila sechellia]
gi|194123842|gb|EDW45885.1| GM26362 [Drosophila sechellia]
Length = 1339
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 137/337 (40%), Gaps = 52/337 (15%)
Query: 81 AIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE 140
AIEW +AVG G Y G + Q ++ ++++ + R A
Sbjct: 100 AIEW------TCVAVGLCSGMVTFYTDTGVKLFSQCCQEDPVIGVKLQSAPR---HSEAN 150
Query: 141 EEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSY---ERLPHQ 197
+ +V P + G +I ML + QR + + SY + +P Q
Sbjct: 151 SLLYIVYPRCMCFIQGQDILPMLTNCRHNV----------QRGALE-RGSYPTADVVPFQ 199
Query: 198 LWNV--SKYGPCADAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSV 240
+ + DAAI+ PP + Q YF V G +
Sbjct: 200 KYKFKQEREAVINDAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSHVLAAGAEPY 259
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFAR 296
+ F+ E +G + V+ + + L + R+ + SP++S P P A
Sbjct: 260 LGFFQAEEGYKTMSLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESLLPVPTKEAP 317
Query: 297 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
L D R G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+
Sbjct: 318 MRIRCRLYDGKRDGLTLAVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFV 377
Query: 357 EMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ K+ + K+ L L I+APR G ++
Sbjct: 378 PV---KEKSVRGIKTHKRKA---LFLVIYAPRMGCLD 408
>gi|24583816|ref|NP_609544.2| rab3-GAP [Drosophila melanogaster]
gi|62511134|sp|Q9VKB9.2|RBGPR_DROME RecName: Full=Rab3 GTPase-activating protein regulatory subunit
gi|22946297|gb|AAF53156.2| rab3-GAP [Drosophila melanogaster]
gi|54650790|gb|AAV36974.1| LD40982p [Drosophila melanogaster]
Length = 1341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 151/372 (40%), Gaps = 60/372 (16%)
Query: 52 TVIINWA----DPEGLVAKIRPELSPIASEYIT--AIEWLVFEEMRALAVGTSRGYFLVY 105
T ++ W DP +V + P+ T AIEW +AVG G Y
Sbjct: 67 TYVLGWCGELEDPNQIVTSLT--CLPMTQNKSTDGAIEW------TCVAVGLCSGMVTFY 118
Query: 106 DLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQR 165
G + Q ++ ++++ + R A+ + ++ P L G +I L
Sbjct: 119 TDSGVKLFSQCCQEDPVIGVKLQSAPR---HSEADSLLYIIYPRCLCFIQGQDILPTLNN 175
Query: 166 WFQDSNSNFWDQKPKQRDSEDLENSY---ERLPHQLWNV--SKYGPCADAAITGLMPPPL 220
+ QR + + +SY + +P Q + + DAAI+ PP
Sbjct: 176 CRHNV----------QRGALE-RSSYPTADVVPFQKYKFKQEREAVINDAAISTTQRPPT 224
Query: 221 MEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRSLVGAILSKVVPA 265
+ Q YF V G + + F+ E +G + V+
Sbjct: 225 YDYIVQQTIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTMSLGEVAKDVIGI 284
Query: 266 TFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRKGERLTLSPSGSL 321
+ + L + R+ + SP++S P P A L D R G L+++P G L
Sbjct: 285 AYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRDGLTLSVAPGGRL 342
Query: 322 AAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381
A +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ + K+ L
Sbjct: 343 AVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGIKTHKRKA---LF 396
Query: 382 LAIHAPRKGIIE 393
L I+APR G ++
Sbjct: 397 LVIYAPRMGCLD 408
>gi|195114558|ref|XP_002001834.1| GI14853 [Drosophila mojavensis]
gi|193912409|gb|EDW11276.1| GI14853 [Drosophila mojavensis]
Length = 1320
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 130/322 (40%), Gaps = 26/322 (8%)
Query: 80 TAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTA 139
T IEW +AVG + G Y G + Q +L +++ R D
Sbjct: 95 TDIEW------TCVAVGLASGLVTFYTDTGVKLFSQCCQEESVLGIKLLSPPRHTEADAL 148
Query: 140 EEEVCVVMPGVLARFDGSEIQKML---QRWFQDSNSNFWDQKPKQRDSEDLENSYERLPH 196
+ +V + +G +I ML +R + S + D P Q+ L+ L
Sbjct: 149 ---LYIVYSSCMCFINGEDILPMLSNCRRNMERSVYSSSDVVPFQKFKFKLQRE-SILND 204
Query: 197 QLWNVSKYGPCADAAIT-GLMPPPLMEVQSSQ-RYFCAVTIGEDSVISAFRLSEDRSRSL 254
+ ++ P D + + VQ++ R + G + + F E
Sbjct: 205 AVICTNQRSPTYDYIVQQSISNGYFARVQATPVRSAQVLAAGAEPYLGFFEAEEGYKTVT 264
Query: 255 VGAILSKVVPATFSTISSLSKMIWRS-EQSPKKSE--PKPQSFARASPLTCLKDHPRKGE 311
+G + V+ + I L + R+ +P+ E P P A L D R G
Sbjct: 265 LGEVAKDVIGMAYKNI--LGGLFRRTPATTPETPEQLPLPSKEAPMRTRCRLYDGKRDGL 322
Query: 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYY 371
L L+P G LAA+TD+L R++L+DTQ +++R+WKGYRDA C F+ + S
Sbjct: 323 TLILAPGGKLAAVTDNLDRVMLVDTQQTIILRVWKGYRDAQCAFVPI------KERSVRG 376
Query: 372 APVKSDYCLCLAIHAPRKGIIE 393
L L I+ PR G ++
Sbjct: 377 IKTHRRNALFLVIYVPRLGCLD 398
>gi|383859150|ref|XP_003705059.1| PREDICTED: LOW QUALITY PROTEIN: rab3 GTPase-activating protein
non-catalytic subunit-like [Megachile rotundata]
Length = 1380
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Query: 279 RSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLD 335
S+ P K + P+TC L D R+G + SP+ +L+ I D++GR++L+D
Sbjct: 314 NSKHQPSLETVKTSAHEPVEPMTCRFGLSDIMREGYSIISSPNKTLSVIIDAMGRVILID 373
Query: 336 TQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGII 392
+ + +R+WKGYRDA C ++E+ K + + ++ L L I+AP+KG+I
Sbjct: 374 NRCGIALRMWKGYRDAQCGWIEVEEEKHSRMHKEFNKFKQTSQLRSALFLVIYAPKKGVI 433
Query: 393 E 393
+
Sbjct: 434 D 434
>gi|194861383|ref|XP_001969771.1| GG10277 [Drosophila erecta]
gi|190661638|gb|EDV58830.1| GG10277 [Drosophila erecta]
Length = 1341
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 135/337 (40%), Gaps = 52/337 (15%)
Query: 81 AIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE 140
AIEW +A+G G + Y G + Q ++ +++ + R A+
Sbjct: 100 AIEW------TCVAIGLCSGMVIFYTDSGVKLFSQCCQEDPVIGVKLHSAPR---HSEAD 150
Query: 141 EEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSY---ERLPHQ 197
+ +V P L G I L + QR + + SY + +P Q
Sbjct: 151 SLLYIVYPRCLCFIQGQHILPTLANCRHNV----------QRSALE-RGSYPTADVVPFQ 199
Query: 198 LWNV--SKYGPCADAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSV 240
+ + DAAI+ PP + Q YF V G +
Sbjct: 200 KYKFKQEREAVINDAAISTTQRPPTYDYIVQQSIGLGYFAKVHATPPRSSQVLAAGAEPY 259
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFAR 296
+ F E +G + V+ + + L + R+ + SP++S P P A
Sbjct: 260 LGFFHAEEGYKTMSLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAP 317
Query: 297 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
L D R G L ++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+
Sbjct: 318 MRIRCRLYDGKRDGLTLAVAPGGRLAFVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFV 377
Query: 357 EMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ K+ + KS L L I+APR G ++
Sbjct: 378 PV---KEKSVRGIKTHKRKS---LFLVIYAPRMGCLD 408
>gi|330845985|ref|XP_003294839.1| hypothetical protein DICPUDRAFT_44031 [Dictyostelium purpureum]
gi|325074615|gb|EGC28634.1| hypothetical protein DICPUDRAFT_44031 [Dictyostelium purpureum]
Length = 627
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 136/319 (42%), Gaps = 49/319 (15%)
Query: 75 ASEYITAIEWLVFEEMR---ALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGS- 130
++ IT+I+++ + + + +G + GY V+ ++G+L+ QL + +LK++V S
Sbjct: 182 GTDRITSIQFIPIDLPQLSYVIGIGYASGYLRVFSIQGNLLLSQLFYNKPVLKIKVSNSP 241
Query: 131 -----RRDLTQDTAEEEVCVVMP-GVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDS 184
+ Q E+ ++ P V+ G ++Q F QR
Sbjct: 242 TLPIGEINHIQKYNVNELTLIYPDNVIVNISGITFLSVVQVCFNQI----------QRGG 291
Query: 185 EDLENSYERLPHQLWNV-SKYGPCADAAITG-LMPPPLMEV---QSSQRYFCAVTIGEDS 239
+ L ++ W + S D G + P + S Q V +G +
Sbjct: 292 GGANSGNNNLSYKKWTMASSVDTVNDVTFCGPFLGSPFRALPYSTSEQSMVRLVAVGSNP 351
Query: 240 VISAFRLSEDRSRS---LVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFA- 295
++S + +ED + ++ ++ S++ A FS +K W S ++ + + +
Sbjct: 352 MVSYYYPTEDGGSTFSVMISSVASRLTTAMFS----YAKNWWGGGSSQQQQQQQQEKQQQ 407
Query: 296 -------------RASPLT---CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL 339
R PL + D+ R+ + + PSG A TD++GR+LLLD
Sbjct: 408 EQERQQQLKLQQERPVPLLQRWAISDYKREIQTILRDPSGRYAVCTDNIGRVLLLDLVNS 467
Query: 340 VVVRLWKGYRDASCVFMEM 358
++V+LWKGYRD C F+ +
Sbjct: 468 LIVKLWKGYRDCQCGFINV 486
>gi|194766005|ref|XP_001965115.1| GF23465 [Drosophila ananassae]
gi|190617725|gb|EDV33249.1| GF23465 [Drosophila ananassae]
Length = 1341
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 95/204 (46%), Gaps = 27/204 (13%)
Query: 209 DAAITGLMPPPLME--VQSS--QRYFCAV-----------TIGEDSVISAFRLSEDRSRS 253
DAAI+ PP + VQ S YF V G + + F+ E
Sbjct: 213 DAAISSTQRPPTYDYIVQQSIGHGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 272
Query: 254 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 309
+ + V+ + + + + R+ + SP++S P P A L D R
Sbjct: 273 SIREVAKDVIGIAYKNL--MGGIFRRAPEPLPSPEESPMPMPTKEAPMRIHCRLYDGKRD 330
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 369
G L ++P G LA +TD+L R++L+DTQ +++R+WKGYRDA C F+ + K+ +
Sbjct: 331 GLTLAVAPGGRLAVVTDNLDRVMLVDTQQAIILRVWKGYRDAQCAFVPV---KERSVRGI 387
Query: 370 YYAPVKSDYCLCLAIHAPRKGIIE 393
K+ L L I+APR G+++
Sbjct: 388 KTHKRKA---LFLVIYAPRLGVLD 408
>gi|5052654|gb|AAD38657.1|AF145682_1 BcDNA.LD23336 [Drosophila melanogaster]
Length = 1239
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 209 DAAITGLMPPPLMEVQSSQR----YFCAV-----------TIGEDSVISAFRLSEDRSRS 253
DAAI+ PP + Q YF V G + + F+ E
Sbjct: 111 DAAISTTQRPPTYDYIVQQTIGLGYFAKVHATPPRSSQVLAAGAEPYLGFFQAEEGYKTM 170
Query: 254 LVGAILSKVVPATFSTISSLSKMIWRSEQ---SPKKSE-PKPQSFARASPLTCLKDHPRK 309
+G + V+ + + L + R+ + SP++S P P A L D R
Sbjct: 171 SLGEVAKDVIGIAYKNL--LGGIFRRAPEPLPSPEESPLPVPTKEAPMRIRCRLYDGKRD 228
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSA 369
G L+++P G LA +TD+L R++L+DT +++R+WKGYRDA C F+ + K+ +
Sbjct: 229 GLTLSVAPGGRLAVVTDNLDRVMLVDTHQAIILRVWKGYRDAQCAFVPV---KEKSVRGI 285
Query: 370 YYAPVKSDYCLCLAIHAPRKGIIE 393
K+ L L I+APR G ++
Sbjct: 286 KTHKRKA---LFLVIYAPRMGCLD 306
>gi|328770113|gb|EGF80155.1| hypothetical protein BATDEDRAFT_88568 [Batrachochytrium
dendrobatidis JAM81]
Length = 1091
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 35/315 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLA 152
+A+G S GY +D KG L+ Q +H R+ +R R Q++ E V ++
Sbjct: 71 VAIGYSSGYLRFFDEKGVLIISQQLHNSRVQSIRARTVVSFDIQESDEILVSYKDKHAIS 130
Query: 153 RFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAI 212
DG+ + M R+ Q S + K+ + E + + + S + P +
Sbjct: 131 -IDGTSLW-MAARFGQLSTEDAPALSYKKWIFQSQEQVVDIISCGPLSRSVFSPPQFNKL 188
Query: 213 TGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAIL-SKVVPATFSTIS 271
TG P V + RY + +G+ V A + + SRSL I+ S+V A S +
Sbjct: 189 TGEYAP----VNYTARY---IAVGKPMV--ALYATTETSRSLFAGIVPSRVTSAVTSAVF 239
Query: 272 SLSKMIWRSEQSP-----KKSEPKPQSF--ARASPLTCLKDHPRKGERLTLSPSG----- 319
S +K +W S P + EP + + L D R +T +PS
Sbjct: 240 SFAKTLWNSPNQPSSVANQSKEPSLTTTPGVVVPAVIVLSDSNRHILSITQAPSSVTTPR 299
Query: 320 -SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY 378
SLA ++DSLGR+L+LDT ++R++KG RDA ++++ S +
Sbjct: 300 SSLAVMSDSLGRVLVLDTDEGEIIRIFKGVRDAQTAWIQV---------SDQSGRIDRPV 350
Query: 379 CLCLAIHAPRKGIIE 393
L LAI++ R G++E
Sbjct: 351 LLVLAIYSSR-GVLE 364
>gi|195386636|ref|XP_002052010.1| GJ23995 [Drosophila virilis]
gi|194148467|gb|EDW64165.1| GJ23995 [Drosophila virilis]
Length = 1334
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 236 GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSF- 294
G + + F E +G + V+ + + L + R+ P+ + +P
Sbjct: 251 GAEPYLGFFEAEEGYKTVSLGEVAKDVIGMAYKNL--LGGLFRRA---PEATADQPDQMP 305
Query: 295 --ARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYR 349
++ +P+ L D R G L L+P LAA+TD+L R++L+DTQ +++R+WKGYR
Sbjct: 306 LPSKEAPMRTRCRLYDGKRDGLTLALAPGSKLAAVTDNLDRVMLVDTQQAIILRVWKGYR 365
Query: 350 DASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
DA C FM + K+ + K+ L L I+APR G ++
Sbjct: 366 DAQCAFMPI---KERSVRGIKTHKRKA---LFLVIYAPRLGCLD 403
>gi|340709136|ref|XP_003393169.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Bombus terrestris]
Length = 1408
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 60/101 (59%), Gaps = 6/101 (5%)
Query: 299 PLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVF 355
P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + R+WKGYRDA C +
Sbjct: 339 PMTCRFGLSDVMREGYSIISSPNKALSVILDAMGRVLLIDNRYCIATRMWKGYRDAQCGW 398
Query: 356 MEMLVNKDAA---TSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+E+ K + T + + + L I+AP+KG+I+
Sbjct: 399 IEVEEEKHSGMHKTFTKFKQTPQLRSAFFLVIYAPKKGVID 439
>gi|195443054|ref|XP_002069254.1| GK21099 [Drosophila willistoni]
gi|194165339|gb|EDW80240.1| GK21099 [Drosophila willistoni]
Length = 1348
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 235 IGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSE--PKPQ 292
IG + + F+ E +G + V+ + + L + R+ + P E P P
Sbjct: 257 IGAEPYLGFFQAEEGYKTVSIGEVAKDVIGMAYKNL--LGGLFRRAPEKPITPEENPLPV 314
Query: 293 SFARASPLT-C-LKDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYR 349
+ A T C L D R G L ++P G LAA+TD+L R++L+DTQ +++R+WKGYR
Sbjct: 315 PYKEAPMRTRCRLYDGKRDGISLVIAPGRGHLAAVTDNLDRVMLVDTQQSLILRVWKGYR 374
Query: 350 DASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
DA C F+++ S L L I+ PR G ++
Sbjct: 375 DAQCGFVQV------KEKSVRGLKTHRRRALFLVIYVPRLGCLD 412
>gi|350413064|ref|XP_003489865.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Bombus impatiens]
Length = 1408
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 6/101 (5%)
Query: 299 PLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVF 355
P+TC L D R+G + SP+ +L+ I D++GR+LL+D + + R+WKGYRDA C +
Sbjct: 339 PMTCRFGLSDVMREGYSIISSPNKALSVILDAMGRVLLVDNRYCIATRMWKGYRDAQCGW 398
Query: 356 MEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGIIE 393
+E+ K + + ++ L I+AP+KG+I+
Sbjct: 399 IEVEEEKHSGMHKGFTKFKQTPQLRSAFFLVIYAPKKGVID 439
>gi|242022172|ref|XP_002431515.1| Rab3 GTPase-activating protein regulatory subunit, putative
[Pediculus humanus corporis]
gi|212516809|gb|EEB18777.1| Rab3 GTPase-activating protein regulatory subunit, putative
[Pediculus humanus corporis]
Length = 1309
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 11/168 (6%)
Query: 233 VTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTIS-SLSKMIWRSEQSPKKSEPKP 291
VT G+ I E S ++ + V S+++ +L + P + K
Sbjct: 270 VTTGKKPFIGFHYTVESASSPILADVALAVANKIKSSVTANLPNWFGFGNKKPVSDKSKE 329
Query: 292 QSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 348
+ L C L D R+G+ + LSP G A++DSLGR++L++ + +RLWKG+
Sbjct: 330 IIYENGEQLNCRFGLCDIWREGQSIILSPDGVYCAVSDSLGRVILVENCTGLALRLWKGF 389
Query: 349 RDASCVFMEMLVNKDAATSSAYYAPVKSDY---CLCLAIHAPRKGIIE 393
RDA C F +LV +D + V + L + ++AP+KG+IE
Sbjct: 390 RDAQCGF--LLVQEDV--KKIKHKKVSESHRRQALFIVLYAPKKGLIE 433
>gi|26327105|dbj|BAC27296.1| unnamed protein product [Mus musculus]
Length = 1001
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 297 ASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 353
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 4 ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQV 63
Query: 354 VFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
+++++ + + ++P S L I+APR+GI+E
Sbjct: 64 GWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILE 109
>gi|34784318|gb|AAH57872.1| Rab3gap2 protein [Mus musculus]
Length = 1001
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 9/106 (8%)
Query: 297 ASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 353
A+PL L D R GE + LSP +LAA+TD GR++LLD + +R+WKGYRDA
Sbjct: 4 ATPLAVRFGLPDSRRHGESICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQV 63
Query: 354 VFMEMLVN-KDAATSSAYYAPV-----KSDYCLCLAIHAPRKGIIE 393
+++++ + + ++P S L I+APR+GI+E
Sbjct: 64 GWIQIVEDLHERVPEKGGFSPFGNTQGPSRVAQFLVIYAPRRGILE 109
>gi|326434518|gb|EGD80088.1| hypothetical protein PTSG_13029 [Salpingoeca sp. ATCC 50818]
Length = 1830
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 86/168 (51%), Gaps = 20/168 (11%)
Query: 239 SVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSP--KKSEPKPQSFAR 296
S + A R++ + S+++V + S ++ S+ SS S ++ Q+ + P P +F+
Sbjct: 193 SAVGAGRVATNFSKAVVSMVSSFWGSSSSSSSSSSSSSRSQAPQTALLQPGTPLPMAFS- 251
Query: 297 ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
L D R+ E L LSP+G+LAA TD+LGR+LL++T+ +VVR+WKGYRDA C ++
Sbjct: 252 ------LSDPRREIEWLALSPNGALAAATDTLGRVLLINTRLSIVVRVWKGYRDARCYWV 305
Query: 357 EM-----------LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
D S L IHA R+G++E
Sbjct: 306 TTDAPKPQDMQAGTATNDTRGSGGGANGGGGGGAHQLCIHARRRGLLE 353
>gi|307178009|gb|EFN66870.1| Rab3 GTPase-activating protein non-catalytic subunit [Camponotus
floridanus]
Length = 1018
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 55/94 (58%), Gaps = 3/94 (3%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
L D R+G+ + SP+ L+ I+D++GR+LL++ + V VRLWKGYRDA C ++E K
Sbjct: 340 LSDIMREGDCIVCSPNKMLSVISDAMGRVLLINNKRGVAVRLWKGYRDAQCGWIEATEEK 399
Query: 363 DAATSSAYYAPVKS---DYCLCLAIHAPRKGIIE 393
D + L L I+AP+KG+I+
Sbjct: 400 DRGIHRNINKSGRKILLRTALFLVIYAPKKGVID 433
>gi|66813206|ref|XP_640782.1| hypothetical protein DDB_G0281043 [Dictyostelium discoideum AX4]
gi|60468818|gb|EAL66818.1| hypothetical protein DDB_G0281043 [Dictyostelium discoideum AX4]
Length = 634
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 44/314 (14%)
Query: 75 ASEYITAIEWLVFEEM---RALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSR 131
++ IT+I+++ +A+G + GY V+ ++G+L+ QL + ILK++V+ +
Sbjct: 193 GTDRITSIQFVPINSHIINYVVAIGYTSGYLRVFSIQGNLLLSQLFYNKPILKIKVKNTS 252
Query: 132 RDLTQDTAEE------EVCVVMP-GVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDS 184
D + E+ +V P ++ G ++Q N + +
Sbjct: 253 ILPIGDIMVQPKYLVHELTLVYPDNIVVNISGLTFISVIQVCLNQRNGGGGGGGGGENNL 312
Query: 185 E----DLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSV 240
L NS +R+ +V+ GP + L P QS R V +G + +
Sbjct: 313 SFKKWTLGNSVDRIN----DVTFCGPFLGSPFRAL--PYSTTEQSMIR---LVGVGSNPM 363
Query: 241 ISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQS---------------PK 285
IS + +ED S I S T + + S +K W +Q P
Sbjct: 364 ISFYYPTEDGGSSFSIMISSITSRLT-TAVFSYAKNWWGGKQDQQQQQQQQQQQQQRQPH 422
Query: 286 KSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW 345
+ +P P + A + D R+ + + PSG A TD+LGR+LL+D +VV++W
Sbjct: 423 QEKPVPLALRWA-----ITDFKREIISINIDPSGRYAISTDNLGRVLLIDLVNSLVVKIW 477
Query: 346 KGYRDASCVFMEML 359
KGYRD C F+ ++
Sbjct: 478 KGYRDCQCGFVSVV 491
>gi|345495398|ref|XP_001601828.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Nasonia vitripennis]
Length = 1423
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 143/331 (43%), Gaps = 38/331 (11%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRG--SRRDLTQDTAEEEVCVVMPGV 150
+AVG + G+ Y G L+ + +H I+ ++ + S R EE+ V+ V
Sbjct: 121 IAVGLNTGFLKFYTETGGLLLEEQLHNESIVNIKCQSHHSARHSGDTGNTEEIYVLYNTV 180
Query: 151 LARFDGSEIQKMLQRW---FQDSNSNFWDQKPKQR--------DSEDLENSYERLPHQLW 199
+ G + L+ + +N D P ++D N E +
Sbjct: 181 VCILQGFPLFSTLRAYRNHLARVKANCDDIPPAANLVCKKWGFKNQDFVNDSEVIGTT-- 238
Query: 200 NVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAIL 259
V+ + A+I G S+ ++ + G+ I E S +L
Sbjct: 239 TVNTFDHLMTASICGGYNASYR--SSAPQHSLVMATGKRPFIGFHYALEGGS----APVL 292
Query: 260 SKVVPATFSTISSL--SKMIW-RSEQSPKKSEPKPQSFARASP---LTC---LKDHPRKG 310
S V A S ++S + + W R+ S + P+ P +TC L D R+G
Sbjct: 293 SDVAIAMASKVASAIGAAVPWFRTSSSKTPATPEKAKGVMTEPAETMTCRFGLSDALREG 352
Query: 311 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAAT---- 366
+ + +SP+ L+ + D++GR++L+D + + +R+WKGYRDA C ++E + + A+
Sbjct: 353 DCIVVSPNKLLSVVCDAMGRVILIDNKQGIAIRMWKGYRDAQCGWIEAIEERHRASIKGH 412
Query: 367 ----SSAYYAPVKSDYCLCLAIHAPRKGIIE 393
SS+ + + L L ++AP+KG+I+
Sbjct: 413 HSKTSSSSTSHAQRRTALFLVVYAPKKGVID 443
>gi|449674390|ref|XP_002155647.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like, partial [Hydra magnipapillata]
Length = 417
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 117/276 (42%), Gaps = 30/276 (10%)
Query: 93 LAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAE-EEVCVVMPGVL 151
+ G S GY +Y G + Q +H ++ ++++ + L Q E +E+ ++ +
Sbjct: 150 IIAGFSSGYIRIYMTNGSQLLCQFLHDAPVVSIKLKTKQHFLPQGANEVDELLIMYAQAI 209
Query: 152 ARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAA 211
DG + + L+ + N + + +E +++ L ++ W V+ D A
Sbjct: 210 VTIDGFSLYQSLR-----ACRNQLARAKASKFNESVDSP--PLAYRKWRVADVNKITDIA 262
Query: 212 ITGLMPPPLME-------------VQSSQRYFCA-VTIGEDSVISAFRLSEDRSRSLVG- 256
G P + ++ S F V GE+ ++ + + E S ++
Sbjct: 263 NCGTFTPCFFDRLMVACNVGFNETIRGSAPAFTHFVATGENKFLNVYHVLEGSSPPMMSD 322
Query: 257 ---AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKG 310
A+ +K+ A S ++ +K W + Q EP + L+ L D R
Sbjct: 323 VAIAVATKLTSAVLSPFTA-AKGWWGASQEKSTKEPAKPKVEIGTNLSSRYFLHDKRRCS 381
Query: 311 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346
E + ++P G LA + D+ RILL DT + +V+R+WK
Sbjct: 382 ENIVVAPIGKLAVVNDAFNRILLFDTHSGLVIRMWK 417
>gi|322801998|gb|EFZ22535.1| hypothetical protein SINV_05735 [Solenopsis invicta]
Length = 1409
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 13/147 (8%)
Query: 258 ILSKVVPATFSTISSL--SKMIWRSEQSPKKSEPKPQSFARASPLTC---LKDHPRKGER 312
+LS V A S +++ + + W ++ K S +TC L D R+G+
Sbjct: 288 VLSDVAIAMASKLANAIGTAVPWFRGKNAMSEASKGISHESIETMTCRFGLSDIMREGDC 347
Query: 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------VNKDAAT 366
+ SP+ + I+D++GR++LL+ + VR+WKGYRDA C ++E+ V+++
Sbjct: 348 IVSSPNKMFSVISDAMGRVILLNNKKGTAVRMWKGYRDAQCGWIEVTEERDRGVHRNVDK 407
Query: 367 SSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S A ++ L L I+AP+KG+I+
Sbjct: 408 KSGRKALFRT--ALFLVIYAPKKGVID 432
>gi|357618932|gb|EHJ71716.1| hypothetical protein KGM_15744 [Danaus plexippus]
Length = 1325
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 9/117 (7%)
Query: 280 SEQSPKKSEP--KPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ 337
+E +P SEP K +S + + + D R G +++SP LAA TDSLGR+ +LD
Sbjct: 295 TETAPMNSEPLIKAESLSMRNGIY---DSQRSGTFVSISPDRRLAAFTDSLGRVSVLDIS 351
Query: 338 ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKS-DYCLCLAIHAPRKGIIE 393
++RL+KG RDA C F+++ DA + VK + L I+ P+KG+I+
Sbjct: 352 KGYIIRLFKGCRDAQCAFIQIF---DADNKKPQLSVVKEIRRAMFLIIYNPKKGLID 405
>gi|241997640|ref|XP_002433469.1| hypothetical protein IscW_ISCW000719 [Ixodes scapularis]
gi|215490892|gb|EEC00533.1| hypothetical protein IscW_ISCW000719 [Ixodes scapularis]
Length = 971
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
+ D R G R+ LSP+ LA ITDS+GRI L D +R+WKGYRDA C ++E V
Sbjct: 174 IYDKHRWGARICLSPNKRLAVITDSVGRITLFDVFHGNALRIWKGYRDADCGWVE--VED 231
Query: 363 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ + P K+ + L ++APR G++E
Sbjct: 232 SSPDTKVNGVPRKTQF---LVVYAPRWGLVE 259
>gi|301095868|ref|XP_002897033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262108462|gb|EEY66514.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 1417
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 12/90 (13%)
Query: 304 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKD 363
+D R+ L LSP+G LAA++D+LGRILL+DT ++V+R+WKGYR+A +M+
Sbjct: 337 EDERRRCRVLVLSPTGRLAAVSDTLGRILLVDTARMLVIRMWKGYRNAQVGWMQ------ 390
Query: 364 AATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ A P L L I++ ++GI+E
Sbjct: 391 -GSDGARRPP-----GLYLVIYSAQRGIVE 414
>gi|332017708|gb|EGI58384.1| Rab3 GTPase-activating protein non-catalytic subunit [Acromyrmex
echinatior]
Length = 1362
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 65/112 (58%), Gaps = 10/112 (8%)
Query: 290 KPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346
K S +TC L D R+G+ + SP+ + I+D++GR++L++ + + +R+WK
Sbjct: 324 KSISHESVETMTCRFGLSDIMREGDCIVCSPNKMFSIISDAMGRVILINNKKGIALRMWK 383
Query: 347 GYRDASCVFMEMLVNKDAAT-----SSAYYAPVKSDYCLCLAIHAPRKGIIE 393
GYR+A C ++E+ +D A S A +++ L L I+AP+KG+I+
Sbjct: 384 GYRNAQCGWIEVTEERDRAIRRNVDKSGRKALLRT--ALFLVIYAPKKGVID 433
>gi|384252390|gb|EIE25866.1| hypothetical protein COCSUDRAFT_60876 [Coccomyxa subellipsoidea
C-169]
Length = 462
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 108/270 (40%), Gaps = 62/270 (22%)
Query: 115 QLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNF 174
Q +H + LR+R + ++ D A E+V V A F E+ S +
Sbjct: 51 QRLHTSAVTSLRMRVAGMHVSADDAAEDVTVCFEDAAACFSSIEV----------SCGST 100
Query: 175 WDQKPKQRDSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRY---FC 231
W+ K P +DA G P L V +S+
Sbjct: 101 WEFK-----------------------RTLSPRSDALCLGSKFPGLYSVMTSRDTNPSLL 137
Query: 232 AVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMI-------------- 277
+T+G I++F + E ++ + A+ S + S ++ L+K
Sbjct: 138 LLTVGRLPPIASFEVKEHAAQGTL-ALFSDMASTAVSGMAGLAKAAIVGRDDGYRAGLRK 196
Query: 278 W-----RSEQSPKKSEPK------PQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITD 326
W S S S P PQ+ A+ KD R LT +P GS AA+TD
Sbjct: 197 WLRGRGESHSSEAPSSPMTPTDDVPQAAEPATLWRSFKDDARHITSLTPAPRGSFAAVTD 256
Query: 327 SLGRILLLDTQALVVVRLWKGYRDASCVFM 356
+LGR+LL+DT +++++KGYRDA C ++
Sbjct: 257 NLGRVLLIDTATAAILQVFKGYRDAQCAWL 286
>gi|224000055|ref|XP_002289700.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974908|gb|EED93237.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 2068
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 14/95 (14%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM---- 358
D PR+ E+ T+ PSG+ A TD+LGR+LL+D + +R+WKG R+ SC F E+
Sbjct: 685 FSDAPRRFEKATVDPSGTYVATTDNLGRVLLIDLETKQPIRMWKGMRNVSCYFAELPCLS 744
Query: 359 LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
L K + + Y L IH ++G +E
Sbjct: 745 LGGKTTSIGTRLY----------LVIHMRQRGSVE 769
>gi|325183534|emb|CCA17995.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 1670
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 57/101 (56%), Gaps = 16/101 (15%)
Query: 297 ASPL----TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDAS 352
A+PL T +D R+ L +SP G +AA+ DSLGR++L+DT ++++R+WKGYR+A
Sbjct: 586 AAPLKAIATFTEDSRRRCRMLIVSPCGRVAALADSLGRVMLVDTWRMIIIRMWKGYRNAQ 645
Query: 353 CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
C + D T Y LAI++ ++G I+
Sbjct: 646 CGWFHGY-EGDERTRGLY-----------LAIYSEQRGTID 674
>gi|219112551|ref|XP_002178027.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410912|gb|EEC50841.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1468
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
L D PR+ E L P G+LAA+ D+LGRI++LD VVR+WKG+R+A+C +++ +
Sbjct: 500 LHDAPRRIEFCALDPKGNLAALADTLGRIIVLDLTTKQVVRVWKGFREATCHWIQAPRAE 559
Query: 363 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
D Y LAIH+ ++ +E
Sbjct: 560 DPGKCRLY-----------LAIHSRQRHALE 579
>gi|321478928|gb|EFX89884.1| hypothetical protein DAPPUDRAFT_299991 [Daphnia pulex]
Length = 1324
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 257 AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLT------CLKDHPRKG 310
A+ SKV FS S + + + PKP+ A P T L D R+
Sbjct: 317 ALASKVTSKIFSKTSGWLGWGGGAADT---APPKPKDKQVAEPATPVYPRYGLADSLREA 373
Query: 311 ERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML--VNKDAATSS 368
++ SP+ AA+TDSLGR++L+D V VR+WKGYRDA C ++ V + +++S
Sbjct: 374 LSISASPNERFAAVTDSLGRVILIDLPRGVAVRMWKGYRDAQCGWITAWEEVGQLSSSSC 433
Query: 369 AYYAPVKSDYCLCLAIHAPRKGIIE 393
+ L I+ ++GI+E
Sbjct: 434 SERETTIPRTVSFLVIYITKRGIVE 458
>gi|324500483|gb|ADY40228.1| Rab3 GTPase-activating protein regulatory subunit [Ascaris suum]
Length = 1354
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 16/151 (10%)
Query: 271 SSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSP-SGSLAAITDSLG 329
S L + R +++P P +S + + L D R+GER+ S +L A+TDS+
Sbjct: 364 SYLGIGVSRKDRTPTAPIPANKSSINLATRSVLLDGGREGERIFPSSREFNLFAVTDSIA 423
Query: 330 RILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVK------SDYCLCLA 383
R++L++ + + R+WKGYRDA C ++E SS+ + VK L L
Sbjct: 424 RVVLIEAASRQITRMWKGYRDARCAWIE--------ASSSIESEVKLSKGKTQATALFLV 475
Query: 384 IHAPRKGIIEHLAGMADENWTTSLNYSVRQR 414
I APR+G++E + M + +++N R R
Sbjct: 476 IFAPRRGLLE-VWSMQNGRRVSAVNVDRRGR 505
>gi|358341236|dbj|GAA48966.1| Rab3 GTPase-activating protein non-catalytic subunit [Clonorchis
sinensis]
Length = 1171
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 323 AITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLV-NKDAATSSAYYAPVKSDYCL- 380
A+TDSLGR+LL+D VVR+WKGYRDA F++ L D S P+
Sbjct: 11 AVTDSLGRVLLVDLNKRRVVRMWKGYRDAELAFVDTLERTSDPGIDSVARKPISHPRTTR 70
Query: 381 CLAIHAPRKGIIE 393
CL IHAP + I+E
Sbjct: 71 CLFIHAPHRRILE 83
>gi|355714932|gb|AES05166.1| RAB3 GTPase activating protein subunit 2 [Mustela putorius furo]
Length = 379
Score = 61.2 bits (147), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML------VNKDAAT 366
+ LSP +LAA+TD GR++LLD + +R+WKGYRDA +++++ V + A
Sbjct: 2 ICLSPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQIIEDLHERVPEKADL 61
Query: 367 SSAYYAPVKSDYCLCLAIHAPRKGIIE 393
S S L I+APR+GI+E
Sbjct: 62 SPFGNTQGPSRVAQFLVIYAPRRGILE 88
>gi|405972679|gb|EKC37435.1| Rab3 GTPase-activating protein non-catalytic subunit [Crassostrea
gigas]
Length = 796
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 81/186 (43%), Gaps = 34/186 (18%)
Query: 229 YFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPK--K 286
+F AV ++S D + ++ + S ++ A + SK +Q PK
Sbjct: 324 FFYAVEGSSQPILS------DVAYAVAHKLKSAIMSAASGWLGFGSKHKEEEKQRPKIEP 377
Query: 287 SEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346
+ P P F L D R G+ + LSP+ S A TDS GR++L+D + VR+WK
Sbjct: 378 ATPIPMRFG-------LPDKRRLGDSIYLSPNNSYVATTDSFGRVILVDVERGTAVRMWK 430
Query: 347 GYRDASCVFMEMLV-----NKDAATSSAYYAPV--------------KSDYCLCLAIHAP 387
GYRDA ++++ +D + A V K L I+AP
Sbjct: 431 GYRDAQLGWVQVKEYVHHGGEDGSYRDAQLGWVQVKEYVHHGGEDGSKERIAQFLIIYAP 490
Query: 388 RKGIIE 393
R+GI+E
Sbjct: 491 RRGILE 496
>gi|299473174|emb|CBN78750.1| Rab3 GTPase-activating protein, non-catalytic subunit, distant
homolog [Ectocarpus siliculosus]
Length = 1632
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML 359
L+D R+ RL L PSG LAA D GR++L+D ++R+WKG RDA C ++E++
Sbjct: 264 LQDGWRRVSRLFLGPSGRLAAAADGFGRVMLVDCATRQILRMWKGVRDAECGWLEVV 320
>gi|256073203|ref|XP_002572921.1| hypothetical protein [Schistosoma mansoni]
gi|350645691|emb|CCD59666.1| hypothetical protein Smp_130000 [Schistosoma mansoni]
Length = 1488
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYA 372
+ +SP AI DSLGR+LL+D VVR+WKGYRDA F+E+ D+ T Y
Sbjct: 328 VAISPDHHWLAIPDSLGRVLLVDACRERVVRMWKGYRDAEVAFLEVC---DSETPYIGYR 384
Query: 373 PVKSDY----CLCLAIHAPRKGIIE 393
K +Y LCL IHAP +E
Sbjct: 385 N-KPNYSVRKTLCLLIHAPHLHSLE 408
>gi|91090530|ref|XP_970468.1| PREDICTED: similar to Rab3 GTPase-activating protein non-catalytic
subunit (Rab3 GTPase-activating protein 150 kDa subunit)
(Rab3-GAP p150) (Rab3-GAP regulatory subunit)
(RAB3-GAP150) [Tribolium castaneum]
Length = 1273
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 160/416 (38%), Gaps = 67/416 (16%)
Query: 15 CTDLSDLGAGKEGWLVNDPNLLCALDMH----TIALANRYQTVIIN--WADPEGLVA-KI 67
C +D G + WL LC L + IALAN + VI+ W L +I
Sbjct: 20 CLFPTDDSRGSDSWLQ-----LCELSVSPTGDVIALANDRRLVILTSKWDTSSSLSQFQI 74
Query: 68 RPELSPIASEYITAIEWL--VFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIHPGRILKL 125
S S+ I ++ + + + + +G G+ Y +L+ + +H I +
Sbjct: 75 TYSGSVHESDNIKSVICVPVIVPDWTCILLGFESGFVRFYTENCELLLEEQLHNEVITSI 134
Query: 126 RVRGS---RRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQR 182
+ R R D+ D EE+ V + G+++ +L+ S D Q
Sbjct: 135 KCRSQHNPRPDIAPDLHPEEIYVQYQSTVCVISGNQLFPILR-------SCRSDLAKVQA 187
Query: 183 DSEDLENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIG------ 236
+ LE + L + W D A+ G+ + A T G
Sbjct: 188 KGDSLELTQGNLAPKKWGFQDQATINDIAVVGVNLHGTFD-----HLLTASTCGGFDTKY 242
Query: 237 ------EDSVISAFRLSEDRSRSLVG----------AILSKVVPATFSTISSLSKMIWRS 280
+ V++A SR VG + S V A + I S + W +
Sbjct: 243 RSQAPYNNLVLAA------GSRPFVGFHYALEGCPQPVFSDVAKAVATKIKS-ALPGWLT 295
Query: 281 EQSPKKSEPKPQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ 337
+ + A + C L D R + LSP LAA++D+LGR++L+D
Sbjct: 296 GNKASVDKQMTVAMQPAESMGCRFGLCDLRRISTNIVLSPDHKLAAVSDALGRVILMDAF 355
Query: 338 ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
V +R++KGYR+A C F+++ + + + + L L I++ +KG +E
Sbjct: 356 RGVTLRIFKGYREAQCSFIQVPDERHSKHR------IGNKVALFLVIYSSKKGTVE 405
>gi|270013878|gb|EFA10326.1| hypothetical protein TcasGA2_TC012543 [Tribolium castaneum]
Length = 1281
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
L D R + LSP LAA++D+LGR++L+D V +R++KGYR+A C F+++ +
Sbjct: 329 LCDLRRISTNIVLSPDHKLAAVSDALGRVILMDAFRGVTLRIFKGYREAQCSFIQVPDER 388
Query: 363 DAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ + + L L I++ +KG +E
Sbjct: 389 HSKHR------IGNKVALFLVIYSSKKGTVE 413
>gi|302844209|ref|XP_002953645.1| hypothetical protein VOLCADRAFT_94488 [Volvox carteri f.
nagariensis]
gi|300261054|gb|EFJ45269.1| hypothetical protein VOLCADRAFT_94488 [Volvox carteri f.
nagariensis]
Length = 847
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
L+ +P GSL A DSLGR+LL++ A++V R+WKGYRDA ++E+
Sbjct: 481 LSPAPYGSLVAAVDSLGRLLLVEVGAMLVSRMWKGYRDAQVAWLEV 526
>gi|237831583|ref|XP_002365089.1| hypothetical protein TGME49_058750 [Toxoplasma gondii ME49]
gi|211962753|gb|EEA97948.1| hypothetical protein TGME49_058750 [Toxoplasma gondii ME49]
gi|221506746|gb|EEE32363.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 410
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 7/123 (5%)
Query: 299 PLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 357
P + D R G L + P + SLAA+TDS G+I L+ T +L ++ +WKGYR+A ++
Sbjct: 48 PAKIVDDSKRVGLSLAVCPWNNSLAALTDSCGKISLISTSSLEILFMWKGYREAQVAWLR 107
Query: 358 MLVNKDAATSSAYYAPVK------SDYCLCLAIHAPRKGIIEHLAGMADENWTTSLNYSV 411
++S P+ D L ++APR+G E +E +
Sbjct: 108 CFCPLPHDSNSCSSPPLSREGARPGDPHGGLVLYAPRRGEREQETANREEEGDSEQRGRG 167
Query: 412 RQR 414
RQR
Sbjct: 168 RQR 170
>gi|323456949|gb|EGB12815.1| hypothetical protein AURANDRAFT_60903 [Aureococcus anophagefferens]
Length = 1272
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 41/70 (58%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNK 362
D R+ + +SP G LAA++D+LGR+LL+D A +VRL+KG R A ++E+
Sbjct: 230 FDDAGREAHGVAVSPRGDLAAVSDNLGRVLLVDVAAGRLVRLFKGARRAQVAWVEVDDGD 289
Query: 363 DAATSSAYYA 372
A T Y A
Sbjct: 290 GAKTPGLYLA 299
>gi|397588644|gb|EJK54344.1| hypothetical protein THAOC_26038 [Thalassiosira oceanica]
Length = 1548
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 12/81 (14%)
Query: 288 EPKPQSFAR----------ASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ 337
+P SF R AS + C DHPR+ E+ + P+G+ AA+ D+LGRI+L +
Sbjct: 521 QPPTDSFVRGKQMHSWQQSASLVFC--DHPRQFEKAIVDPTGTRAALIDNLGRIVLYNLD 578
Query: 338 ALVVVRLWKGYRDASCVFMEM 358
++ + KG R+A C F E+
Sbjct: 579 NKQILLILKGIRNAKCHFSEL 599
>gi|307108839|gb|EFN57078.1| hypothetical protein CHLNCDRAFT_143843 [Chlorella variabilis]
Length = 654
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFM 356
D R ++ LSP+G AA DSLGR++L+DT A +VVR+ KGYR+A ++
Sbjct: 392 DEKRCITQMALSPTGGWAACCDSLGRVMLVDTAATLVVRMLKGYREAQVAWL 443
>gi|47207038|emb|CAF91251.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 12/102 (11%)
Query: 257 AILSKVVPATFSTISSLSKMIWRS----EQSPKKSEPKPQSFARASPLTC---LKDHPRK 309
A+ SK+ A S S + W E++ +K +PK + A+PL L D R
Sbjct: 86 AVASKLTSALLSAASGW--LGWNKNRNEEETVQKQKPKLEP---ATPLGVRFGLPDSRRH 140
Query: 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 351
GE + LSP LA +TD GR+ LLD + +R+WKG +
Sbjct: 141 GESICLSPCNMLAGVTDDFGRVTLLDLARGICIRMWKGEENC 182
>gi|221487060|gb|EEE25306.1| conserved hypothetical protein [Toxoplasma gondii GT1]
Length = 356
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 54/111 (48%), Gaps = 7/111 (6%)
Query: 299 PLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 357
P + D R G L + P + SLAA+TDS G+I L+ T +L ++ +WKGYR+A ++
Sbjct: 27 PAKIVDDSKRVGLSLAVCPWNNSLAALTDSCGKISLISTSSLEILFMWKGYREAQVAWLR 86
Query: 358 MLVNKDAATSSAYYAPVK------SDYCLCLAIHAPRKGIIEHLAGMADEN 402
++S P+ D L ++APR+G E +E
Sbjct: 87 CFCPLPHDSNSCSSPPLSREGARPGDPHGGLVLYAPRRGEREQETANREEE 137
>gi|159471638|ref|XP_001693963.1| hypothetical protein CHLREDRAFT_173276 [Chlamydomonas reinhardtii]
gi|158277130|gb|EDP02899.1| hypothetical protein CHLREDRAFT_173276 [Chlamydomonas reinhardtii]
Length = 618
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 284 PKKSEPKPQSFARASPLTCLKDHPRKGER---LTLSPSGSLAAITDSLGRILLLDTQALV 340
P S P + R C + H G L +P GSL + D LGR+ L++ ++
Sbjct: 402 PLASFPDGTAGQRLPATGCWRQHRDDGRLVGCLAPAPHGSLVSAVDGLGRVTLVEAGGML 461
Query: 341 VVRLWKGYRDA 351
V R+WKGYRDA
Sbjct: 462 VSRMWKGYRDA 472
>gi|387220215|gb|AFJ69816.1| rab3 gtpase-activating protein non-catalytic subunit, partial
[Nannochloropsis gaditana CCMP526]
Length = 58
Score = 46.6 bits (109), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 315 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 357
+ PSG L A+TD+LGR+++LD + V+RL+KG+R A ++E
Sbjct: 1 MDPSGRLIAVTDTLGRVMVLDLRTRQVLRLFKGHRGAQVGWLE 43
>gi|401407140|ref|XP_003883019.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325117435|emb|CBZ52987.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 392
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 283 SPKKSEPKPQSFARASP---LTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQA 338
S ++SE ++ A A+P + D R G L++ P + +AA+TDS GRI L++T +
Sbjct: 170 SAQRSENGDETQAVAAPGLSAQIVDDGRRVGSSLSVCPWNDCIAALTDSTGRISLVNTSS 229
Query: 339 LVVVRLWKGYRDASCVFMEMLVNKDAATSSA-----------YYAPV-------KSDYCL 380
L ++ +WKGYR+A ++ + SS+ +PV D
Sbjct: 230 LEILYMWKGYREAQVAWLRCFCPSHSHFSSSNPSKSWNSFSVSSSPVARGGEVRPGDPHG 289
Query: 381 CLAIHAPRKGIIE 393
L I+APR+ ++E
Sbjct: 290 GLVIYAPRRDLVE 302
>gi|328701158|ref|XP_001949788.2| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Acyrthosiphon pisum]
Length = 1313
Score = 45.8 bits (107), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 291 PQSFARASPLTC---LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347
P++ + L C L + + ++ LSP S+ I+D+L ++ L + A ++R W G
Sbjct: 321 PETLEQPEQLGCRFSLNEMDCEALKIELSPQLSIGVISDNLEKVTLFEVNAGGIIRTWDG 380
Query: 348 YRDASCVFMEMLVNKDAATSS 368
YRD F ++VN++ ++SS
Sbjct: 381 YRDVQ--FGWLVVNENKSSSS 399
>gi|312086815|ref|XP_003145226.1| hypothetical protein LOAG_09651 [Loa loa]
Length = 918
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 341 VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+VR+WKGYRDA C ++E + D S Y V+ L L I APR+G++E
Sbjct: 1 MVRMWKGYRDARCAWLEGVSTLDRKKSR-YELEVQPSTALFLIIFAPRRGLLE 52
>gi|297724357|ref|NP_001174542.1| Os05g0581100 [Oryza sativa Japonica Group]
gi|255676605|dbj|BAH93270.1| Os05g0581100 [Oryza sativa Japonica Group]
Length = 333
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 62/129 (48%), Gaps = 16/129 (12%)
Query: 1 MSKRTHTTEVGSI--ACTDLSDLGAG-KEGWLVNDPNLLCALDMHTIALANRYQTVIINW 57
M+ R + EV + A DL+ +G G +EGWL +DP +L L ALA +
Sbjct: 1 MAPRGYLAEVALLTSASEDLAAVGPGEREGWL-DDPAVLPPLAPRARALAVAVAARSVLA 59
Query: 58 ADP---EGLVAKIRPELSPIASEYITAIEWLVFE--------EMRALAVGTSRGYFLVYD 106
P G +RP L P I+A+EW+ E A+AVGT + L+Y
Sbjct: 60 VAPVAGGGGRVTVRPALGPDDGR-ISAVEWIPLAGEDAGEAGERVAVAVGTDARWLLLYS 118
Query: 107 LKGDLVHRQ 115
L GDL+H+Q
Sbjct: 119 LAGDLLHKQ 127
>gi|384502057|gb|EIE92548.1| hypothetical protein RO3G_17146 [Rhizopus delemar RA 99-880]
Length = 459
Score = 45.4 bits (106), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 320 SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEML 359
+LAA +D+LGR++L D ++R+WKG RDA+C ++E
Sbjct: 307 TLAATSDALGRVILWDVVEGEMIRMWKGVRDAACGWVEAF 346
>gi|71991172|ref|NP_001021632.1| Protein RBG-2, isoform b [Caenorhabditis elegans]
gi|38422271|emb|CAE54924.1| Protein RBG-2, isoform b [Caenorhabditis elegans]
Length = 1291
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 367
R + ++ SP A+TD + R+L++D + VV ++KGYRDAS ++ + + A
Sbjct: 358 RVAQNVSRSPDCQYVAVTDRMARVLVIDIASRQVVLIFKGYRDASISWVSVTEDDRVAQF 417
Query: 368 SAYYAPVKS 376
+AP +S
Sbjct: 418 LTIFAPRRS 426
>gi|71991165|ref|NP_001021631.1| Protein RBG-2, isoform a [Caenorhabditis elegans]
gi|62511100|sp|Q22670.1|RBGPR_CAEEL RecName: Full=Rab3 GTPase-activating protein regulatory subunit;
AltName: Full=Rab3 GTPase-activating protein 2
gi|3880032|emb|CAA99926.1| Protein RBG-2, isoform a [Caenorhabditis elegans]
Length = 1307
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATS 367
R + ++ SP A+TD + R+L++D + VV ++KGYRDAS ++ + + A
Sbjct: 374 RVAQNVSRSPDCQYVAVTDRMARVLVIDIASRQVVLIFKGYRDASISWVSVTEDDRVAQF 433
Query: 368 SAYYAPVKS 376
+AP +S
Sbjct: 434 LTIFAPRRS 442
>gi|268567173|ref|XP_002639910.1| C. briggsae CBR-RBG-2 protein [Caenorhabditis briggsae]
Length = 1308
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 295 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354
A +P L R + ++ SP + A+TD L R++++D VV ++KGYRDAS
Sbjct: 359 AVHAPTRSLILETRIAQTVSRSPDCNYVAVTDRLARVIIIDVINRQVVLIFKGYRDASVS 418
Query: 355 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
++ ++T +A L I APR+ ++E
Sbjct: 419 WV-------SSTQDDRFAQF-------LTIFAPRRSLLE 443
>gi|339249855|ref|XP_003373915.1| Rab3 GTPase-activating protein regulatory subunit [Trichinella
spiralis]
gi|316969815|gb|EFV53855.1| Rab3 GTPase-activating protein regulatory subunit [Trichinella
spiralis]
Length = 432
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 44/85 (51%), Gaps = 11/85 (12%)
Query: 310 GERLTLSPSGS-LAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSS 368
GER+++ P LA + DS RI+LLD + +V+ +W GY DA F + V+ +A S
Sbjct: 297 GERISVGPGNCGLAVVYDSGRRIILLDVRNHLVLHVWSGYPDAQ--FGWLPVHDEALNS- 353
Query: 369 AYYAPVKSDYCLCLAIHAPRKGIIE 393
S + L I P KG +E
Sbjct: 354 -------SHFILLFVIFVPAKGRLE 371
>gi|123415256|ref|XP_001304656.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121886123|gb|EAX91726.1| hypothetical protein TVAG_384500 [Trichomonas vaginalis G3]
Length = 652
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 66/160 (41%), Gaps = 21/160 (13%)
Query: 234 TIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQS 293
TIG + S F + S V I++ + W + K E +
Sbjct: 190 TIGNNPFFSVFSAANSDSTISVKKIVTNLFK-------------WMAFTDNNKQE---EE 233
Query: 294 FARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASC 353
+ ++ L+D R + P+G +I D GR+LL+D+ +V+++KG RDA
Sbjct: 234 YPKSKKQWNLRDEGRVTRSIEADPTGRWISICDGQGRVLLIDSVFGHMVKVYKGLRDAQV 293
Query: 354 VFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+ E +KD YAP + + +A P II+
Sbjct: 294 AWSESSSSKDPVL--IIYAPYRK---MIIACTTPNGEIID 328
>gi|341894701|gb|EGT50636.1| hypothetical protein CAEBREN_05070 [Caenorhabditis brenneri]
Length = 1304
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 42/82 (51%)
Query: 295 ARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354
A +P L R + ++ SP + A+TD + R+L++D VV ++KGYRDA+
Sbjct: 359 AVHAPTRSLILETRIAQSVSRSPDSNYVAVTDRMARVLVIDVINRQVVLIFKGYRDATVS 418
Query: 355 FMEMLVNKDAATSSAYYAPVKS 376
++ + A +AP +S
Sbjct: 419 WVSATQDDRVAQFLTIFAPRRS 440
>gi|341898223|gb|EGT54158.1| hypothetical protein CAEBREN_06178 [Caenorhabditis brenneri]
Length = 1307
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 298 SPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFME 357
+P L R + ++ SP + A+TD + R+L++D VV ++KGYRDA+ ++
Sbjct: 362 APTRSLILETRIAQSVSRSPDSNYVAVTDRMARVLVIDVINRQVVLIFKGYRDATVSWVS 421
Query: 358 MLVNKDAATSSAYYAPVKS 376
+ A +AP +S
Sbjct: 422 ATQDDRVAQFLTIFAPRRS 440
>gi|308463132|ref|XP_003093843.1| CRE-RBG-2 protein [Caenorhabditis remanei]
gi|308249283|gb|EFO93235.1| CRE-RBG-2 protein [Caenorhabditis remanei]
Length = 942
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 14/95 (14%)
Query: 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEM 358
P L R + ++ SP + A+TD L R+L++D VV ++KGYRDA+ ++
Sbjct: 366 PTRSLILEQRIAQTVSRSPDCNYVAVTDRLARVLVIDIINRQVVLIFKGYRDATVSWV-- 423
Query: 359 LVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393
+AT A L I APR+ ++E
Sbjct: 424 -----SATQEDRVAQF-------LTIFAPRRSLLE 446
>gi|260830641|ref|XP_002610269.1| hypothetical protein BRAFLDRAFT_92993 [Branchiostoma floridae]
gi|229295633|gb|EEN66279.1| hypothetical protein BRAFLDRAFT_92993 [Branchiostoma floridae]
Length = 149
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR 343
L D R G+ + LSP LAA TDS GR++L+DT V +R
Sbjct: 109 LPDLRRHGDSIVLSPGRQLAATTDSFGRVILIDTDKGVAIR 149
>gi|344998148|ref|YP_004801002.1| LVIVD repeat-containing protein [Streptomyces sp. SirexAA-E]
gi|344313774|gb|AEN08462.1| LVIVD repeat protein [Streptomyces sp. SirexAA-E]
Length = 498
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 95 VGTSRGYFLVYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARF 154
+G +RG +YD+KG HR+L+ R S + + AE EVCV G +
Sbjct: 351 IGPNRGADGIYDIKGRGDHRKLV-------FR---SYFKIDRPQAETEVCVAHNGSIIPV 400
Query: 155 DGSEIQKMLQRWFQDSNSNFWD----QKPKQRDSEDLENSYERLPHQLWNVSKYGP 206
G ++ M+Q W+Q S WD KPK+ +ER P V+ GP
Sbjct: 401 KGKDL--MVQAWYQGGVS-VWDFTDSSKPKEI------AYFERGPVSTDAVTTAGP 447
>gi|391338980|ref|XP_003743831.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
subunit-like [Metaseiulus occidentalis]
Length = 1245
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 11/124 (8%)
Query: 234 TIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKMIWRSE-QSPKKSEPKPQ 292
++G D + +S + S++ + + ++ V F+ + S + W S+ +P ++E P
Sbjct: 242 SVGADPFYN-LTVSREVSQTNLVSDIAVAVANKFTRMLSDNVPFWGSKSNAPTEAELAP- 299
Query: 293 SFARASPLTCLKDH-----PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347
+ S L L H R G + +SPS A+ DSL R++L+D + + KG
Sbjct: 300 ---KISNLNVLHQHGIFDRDRLGTSMCVSPSKRFIALVDSLARVVLMDAGKGTPLYVMKG 356
Query: 348 YRDA 351
YR A
Sbjct: 357 YRKA 360
>gi|401420890|ref|XP_003874934.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322491170|emb|CBZ26435.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 1771
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 9/138 (6%)
Query: 219 PLMEVQSSQRYFCAVTI--GEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLSKM 276
PL+ +QR F V + G + + S+FRL SR S V A S ++ +++
Sbjct: 406 PLLSPLEAQRGFSDVLLVGGTNPLFSSFRLQPPPSRFSA----SNTVAAVKSMVTGVARS 461
Query: 277 IWRSEQSPKKSEPKPQSFARASPLTC--LKDHPRKGERLTLSPSGSLAAIT-DSLGRILL 333
+W K+ P + + L L K L + P+ AA+ + GRI +
Sbjct: 462 LWSKAIGASKTVDHPPRLKKVAALRTHTLLQADAKCTALQVDPTQQWAALAIEGGGRIYV 521
Query: 334 LDTQALVVVRLWKGYRDA 351
+D Q+ +V + KG R A
Sbjct: 522 VDVQSGIVAAVLKGCRAA 539
>gi|161504993|ref|YP_001572105.1| hypothetical protein SARI_03123 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:- str. RSK2980]
gi|160866340|gb|ABX22963.1| hypothetical protein SARI_03123 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 888
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 56/152 (36%), Gaps = 16/152 (10%)
Query: 59 DPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHRQLIH 118
D G +A + P A WL E AV GYFL + Q H
Sbjct: 99 DTAGWLAALHDYAVPEAQNSDFTRAWLNEMERHLHAVSRPEGYFLDDAISHTRWRAQQRH 158
Query: 119 PGRILKLRVRGSRRDLTQDTAEE---EVCVVMPGVLA-------RFDGSEIQKMLQRWFQ 168
++ + RD +D+ EE VC M L+ R + I+ L RWF
Sbjct: 159 TRMVVYRWLPNKSRDPLEDSPEEALNTVCERMVSALSGAGIHARRLECEAIRHWLLRWFN 218
Query: 169 ------DSNSNFWDQKPKQRDSEDLENSYERL 194
DS FW Q +Q D+ +L + E L
Sbjct: 219 PAPQMADSPRQFWQQMAQQDDTPELHDFAESL 250
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,532,514,140
Number of Sequences: 23463169
Number of extensions: 264183169
Number of successful extensions: 608077
Number of sequences better than 100.0: 167
Number of HSP's better than 100.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 607693
Number of HSP's gapped (non-prelim): 207
length of query: 414
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 269
effective length of database: 8,957,035,862
effective search space: 2409442646878
effective search space used: 2409442646878
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)