Query 015021
Match_columns 414
No_of_seqs 97 out of 116
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 05:16:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015021.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015021hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3f3f_A Nucleoporin SEH1; struc 98.6 3.5E-05 1.2E-09 69.6 24.8 94 34-129 16-120 (351)
2 4ery_A WD repeat-containing pr 98.5 0.00012 4.1E-09 67.5 27.2 81 308-405 193-274 (312)
3 1r5m_A SIR4-interacting protei 98.4 0.00011 3.6E-09 69.1 25.3 83 303-405 243-325 (425)
4 1pgu_A Actin interacting prote 98.4 5.5E-05 1.9E-09 75.3 21.9 244 33-405 22-289 (615)
5 2ynn_A Coatomer subunit beta'; 98.4 0.00067 2.3E-08 63.1 28.1 88 34-128 18-106 (304)
6 1k8k_C P40, ARP2/3 complex 41 98.3 0.00053 1.8E-08 63.6 26.5 256 33-399 12-274 (372)
7 3k26_A Polycomb protein EED; W 98.3 0.00029 9.9E-09 64.8 23.4 272 35-399 75-366 (366)
8 3odt_A Protein DOA1; ubiquitin 98.2 0.00076 2.6E-08 60.8 24.8 235 34-404 64-301 (313)
9 2ymu_A WD-40 repeat protein; u 98.2 0.00056 1.9E-08 68.1 26.1 236 35-405 309-544 (577)
10 1nr0_A Actin interacting prote 98.2 0.00024 8.3E-09 73.3 24.0 85 302-405 185-276 (611)
11 2ymu_A WD-40 repeat protein; u 98.2 4E-05 1.4E-09 76.4 17.1 87 34-128 21-107 (577)
12 1erj_A Transcriptional repress 98.2 0.0009 3.1E-08 64.7 25.9 81 306-405 255-347 (393)
13 1got_B GT-beta; complex (GTP-b 98.2 0.00057 1.9E-08 64.6 23.2 84 303-405 180-263 (340)
14 3jrp_A Fusion protein of prote 98.1 0.0014 4.7E-08 60.6 24.8 92 34-129 16-111 (379)
15 1yfq_A Cell cycle arrest prote 98.1 0.00077 2.6E-08 61.9 22.4 84 307-405 193-288 (342)
16 3zwl_B Eukaryotic translation 98.1 0.0013 4.4E-08 60.4 23.9 79 308-405 176-255 (369)
17 1vyh_C Platelet-activating fac 98.1 0.0015 5E-08 63.8 25.5 70 317-405 306-375 (410)
18 3mkq_A Coatomer beta'-subunit; 98.1 0.0015 5.1E-08 68.0 26.8 88 34-128 18-106 (814)
19 2pm9_A Protein WEB1, protein t 98.1 0.00024 8.2E-09 67.2 18.3 86 301-404 255-342 (416)
20 4gqb_B Methylosome protein 50; 98.0 0.0029 1E-07 61.0 26.0 83 302-403 252-335 (344)
21 3ei3_B DNA damage-binding prot 98.0 0.00074 2.5E-08 63.9 21.2 254 34-405 78-345 (383)
22 3mmy_A MRNA export factor; mRN 98.0 0.00063 2.2E-08 62.4 20.1 43 308-350 274-316 (368)
23 4g56_B MGC81050 protein; prote 98.0 0.0031 1.1E-07 60.5 25.6 78 306-402 268-346 (357)
24 3v7d_B Cell division control p 98.0 0.0038 1.3E-07 60.6 26.2 50 302-351 305-354 (464)
25 1gxr_A ESG1, transducin-like e 98.0 0.0067 2.3E-07 54.9 26.3 77 308-404 225-301 (337)
26 1r5m_A SIR4-interacting protei 98.0 0.0014 4.9E-08 61.3 22.3 79 303-401 285-363 (425)
27 1got_B GT-beta; complex (GTP-b 98.0 0.0032 1.1E-07 59.5 24.6 69 309-396 272-340 (340)
28 4a11_B DNA excision repair pro 98.0 0.0086 2.9E-07 55.8 26.9 226 34-347 48-285 (408)
29 4aow_A Guanine nucleotide-bind 98.0 0.01 3.6E-07 54.1 27.2 80 304-404 212-291 (340)
30 4ggc_A P55CDC, cell division c 97.9 0.0015 5.2E-08 59.0 20.7 85 35-126 31-116 (318)
31 4gga_A P55CDC, cell division c 97.9 0.018 6.2E-07 55.8 31.1 85 35-126 111-196 (420)
32 3vl1_A 26S proteasome regulato 97.9 0.0062 2.1E-07 57.8 25.4 89 33-128 101-190 (420)
33 3dw8_B Serine/threonine-protei 97.9 0.0045 1.5E-07 59.2 24.3 78 305-404 283-378 (447)
34 3ei3_B DNA damage-binding prot 97.9 0.0067 2.3E-07 57.3 24.8 89 35-128 124-213 (383)
35 1p22_A F-BOX/WD-repeat protein 97.8 0.0084 2.9E-07 58.3 25.4 86 33-127 135-221 (435)
36 2pbi_B Guanine nucleotide-bind 97.8 0.0056 1.9E-07 58.5 23.5 69 309-396 286-354 (354)
37 1k8k_C P40, ARP2/3 complex 41 97.8 0.0019 6.4E-08 59.8 19.5 80 307-405 142-239 (372)
38 3dwl_C Actin-related protein 2 97.8 0.0035 1.2E-07 58.8 20.8 228 34-350 16-252 (377)
39 3i2n_A WD repeat-containing pr 97.7 0.023 8E-07 51.9 25.2 81 305-403 257-357 (357)
40 3zwl_B Eukaryotic translation 97.7 0.0003 1E-08 64.7 11.4 85 302-405 27-111 (369)
41 3jro_A Fusion protein of prote 97.7 0.0059 2E-07 65.0 22.9 93 34-129 14-109 (753)
42 3fm0_A Protein CIAO1; WDR39,SG 97.6 0.026 8.9E-07 53.4 24.5 91 34-128 21-114 (345)
43 2pbi_B Guanine nucleotide-bind 97.6 0.016 5.3E-07 55.4 23.0 83 303-404 192-276 (354)
44 4aez_A CDC20, WD repeat-contai 97.6 0.013 4.5E-07 56.2 22.4 80 308-406 304-387 (401)
45 4gqb_B Methylosome protein 50; 97.6 0.00042 1.4E-08 66.9 11.7 85 303-405 123-207 (344)
46 3dm0_A Maltose-binding peripla 97.6 0.03 1E-06 58.2 26.3 81 303-404 557-637 (694)
47 3i2n_A WD repeat-containing pr 97.6 0.025 8.4E-07 51.8 22.7 79 307-403 209-295 (357)
48 3sfz_A APAF-1, apoptotic pepti 97.5 0.0065 2.2E-07 66.9 21.7 89 34-128 662-752 (1249)
49 3ow8_A WD repeat-containing pr 97.5 0.0004 1.4E-08 65.8 9.7 85 303-406 202-286 (321)
50 2ynn_A Coatomer subunit beta'; 97.5 0.00045 1.5E-08 64.3 9.9 86 301-405 7-92 (304)
51 4a11_B DNA excision repair pro 97.4 0.0093 3.2E-07 55.6 18.5 87 303-404 182-281 (408)
52 4ery_A WD repeat-containing pr 97.4 0.0008 2.7E-08 61.9 10.8 86 301-405 17-102 (312)
53 4h5i_A Guanine nucleotide-exch 97.4 0.00071 2.4E-08 65.3 10.9 83 302-403 264-347 (365)
54 3ow8_A WD repeat-containing pr 97.4 0.00071 2.4E-08 64.0 10.2 84 303-405 160-243 (321)
55 1vyh_C Platelet-activating fac 97.3 0.00088 3E-08 65.4 10.3 86 301-405 186-271 (410)
56 4e54_B DNA damage-binding prot 97.3 0.025 8.4E-07 55.2 20.6 78 306-402 354-433 (435)
57 1yfq_A Cell cycle arrest prote 97.3 0.043 1.5E-06 50.1 20.9 44 307-350 251-295 (342)
58 3frx_A Guanine nucleotide-bind 97.3 0.0012 4.3E-08 61.9 10.4 86 299-404 57-142 (319)
59 2ovr_B FBW7, F-BOX/WD repeat p 97.3 0.049 1.7E-06 52.8 21.8 73 310-405 282-354 (445)
60 1erj_A Transcriptional repress 97.2 0.0015 5.2E-08 63.1 10.8 80 306-404 122-201 (393)
61 4e54_B DNA damage-binding prot 97.2 0.012 4E-07 57.5 17.1 84 304-406 247-334 (435)
62 4g56_B MGC81050 protein; prote 97.2 0.0018 6.1E-08 62.2 10.7 84 303-404 135-218 (357)
63 3vl1_A 26S proteasome regulato 97.2 0.0012 4.2E-08 62.7 9.4 84 303-405 135-218 (420)
64 3vu4_A KMHSV2; beta-propeller 97.1 0.0022 7.5E-08 61.4 10.8 83 300-401 188-273 (355)
65 1gxr_A ESG1, transducin-like e 97.1 0.003 1E-07 57.3 10.7 84 303-405 137-220 (337)
66 3f3f_A Nucleoporin SEH1; struc 97.0 0.0046 1.6E-07 55.5 10.5 83 302-401 6-92 (351)
67 3jrp_A Fusion protein of prote 96.9 0.0029 9.8E-08 58.4 9.0 84 301-401 5-90 (379)
68 1sq9_A Antiviral protein SKI8; 96.9 0.0027 9.1E-08 59.7 8.9 81 307-406 233-329 (397)
69 2aq5_A Coronin-1A; WD40 repeat 96.9 0.0041 1.4E-07 59.6 10.2 88 299-405 123-213 (402)
70 3gre_A Serine/threonine-protei 96.9 0.0044 1.5E-07 59.6 10.4 85 306-405 213-298 (437)
71 3mmy_A MRNA export factor; mRN 96.9 0.0063 2.1E-07 55.7 10.9 83 303-405 82-166 (368)
72 3lrv_A PRE-mRNA-splicing facto 96.8 0.0059 2E-07 57.4 10.6 79 307-403 125-205 (343)
73 1pgu_A Actin interacting prote 96.8 0.0068 2.3E-07 60.2 11.2 93 303-404 484-578 (615)
74 3k26_A Polycomb protein EED; W 96.8 0.0042 1.4E-07 57.0 8.9 83 302-403 110-196 (366)
75 2aq5_A Coronin-1A; WD40 repeat 96.8 0.0087 3E-07 57.3 11.2 86 302-405 76-169 (402)
76 3mkq_A Coatomer beta'-subunit; 96.7 0.0047 1.6E-07 64.3 9.9 86 301-405 7-92 (814)
77 3jro_A Fusion protein of prote 96.7 0.22 7.5E-06 52.9 22.7 68 318-401 169-240 (753)
78 1sq9_A Antiviral protein SKI8; 96.7 0.0078 2.7E-07 56.5 10.2 41 306-346 290-330 (397)
79 3lrv_A PRE-mRNA-splicing facto 96.6 0.0062 2.1E-07 57.3 8.9 77 309-405 172-250 (343)
80 3frx_A Guanine nucleotide-bind 96.6 0.0086 2.9E-07 56.1 9.8 86 301-405 11-102 (319)
81 3sfz_A APAF-1, apoptotic pepti 96.6 0.008 2.7E-07 66.2 10.8 84 303-405 611-694 (1249)
82 2vdu_B TRNA (guanine-N(7)-)-me 96.6 0.0056 1.9E-07 59.9 8.6 84 302-405 190-277 (450)
83 2xzm_R RACK1; ribosome, transl 96.5 0.0091 3.1E-07 56.3 9.6 79 302-399 71-149 (343)
84 4gga_A P55CDC, cell division c 96.5 0.012 4.2E-07 57.0 10.5 80 303-403 143-222 (420)
85 3odt_A Protein DOA1; ubiquitin 96.5 0.0097 3.3E-07 53.4 8.9 79 306-405 183-261 (313)
86 3dw8_B Serine/threonine-protei 96.4 0.017 5.8E-07 55.1 10.6 84 303-405 222-322 (447)
87 3iz6_a 40S ribosomal protein R 96.4 0.0089 3E-07 57.4 8.7 79 310-403 301-379 (380)
88 4aez_A CDC20, WD repeat-contai 96.4 0.018 6E-07 55.4 10.8 85 303-405 213-299 (401)
89 2hes_X YDR267CP; beta-propelle 96.4 0.011 3.8E-07 55.6 9.2 80 302-400 102-185 (330)
90 2xzm_R RACK1; ribosome, transl 96.3 0.02 6.8E-07 53.9 10.6 86 301-405 15-113 (343)
91 3iz6_a 40S ribosomal protein R 96.3 0.024 8.2E-07 54.4 11.3 89 301-404 243-334 (380)
92 4ggc_A P55CDC, cell division c 96.3 0.026 8.8E-07 50.9 10.6 53 303-355 63-115 (318)
93 2pm7_B Protein transport prote 96.3 0.69 2.4E-05 42.4 24.0 67 318-400 169-239 (297)
94 1nr0_A Actin interacting prote 96.2 0.02 6.9E-07 58.9 10.8 84 303-405 143-227 (611)
95 2pm7_B Protein transport prote 96.2 0.023 7.7E-07 52.5 10.0 82 303-401 5-88 (297)
96 2vdu_B TRNA (guanine-N(7)-)-me 96.2 0.014 4.8E-07 57.1 8.8 83 307-405 149-235 (450)
97 3dm0_A Maltose-binding peripla 96.1 0.02 6.8E-07 59.6 9.9 81 302-401 425-505 (694)
98 3gre_A Serine/threonine-protei 96.0 0.029 9.8E-07 53.9 10.0 72 315-405 178-251 (437)
99 3v7d_B Cell division control p 96.0 0.021 7.3E-07 55.3 9.2 82 303-405 117-198 (464)
100 2oaj_A Protein SNI1; WD40 repe 96.0 0.016 5.4E-07 63.6 9.1 90 300-406 568-671 (902)
101 1p22_A F-BOX/WD-repeat protein 96.0 0.027 9.3E-07 54.7 9.7 38 313-350 137-174 (435)
102 3bg1_A Protein SEC13 homolog; 95.9 0.019 6.4E-07 53.7 7.8 82 303-401 9-92 (316)
103 3fm0_A Protein CIAO1; WDR39,SG 95.9 0.04 1.4E-06 52.1 10.2 79 305-402 59-139 (345)
104 1l0q_A Surface layer protein; 95.9 0.077 2.6E-06 49.8 12.1 79 308-405 200-281 (391)
105 2ovr_B FBW7, F-BOX/WD repeat p 95.8 0.03 1E-06 54.2 9.0 38 314-351 124-161 (445)
106 3dwl_C Actin-related protein 2 95.7 0.025 8.7E-07 52.8 8.1 77 306-402 145-239 (377)
107 1l0q_A Surface layer protein; 95.7 0.061 2.1E-06 50.5 10.6 78 309-405 33-111 (391)
108 4aow_A Guanine nucleotide-bind 95.6 0.07 2.4E-06 48.5 10.5 85 301-404 32-122 (340)
109 3bws_A Protein LP49; two-domai 95.5 0.037 1.3E-06 52.8 8.4 78 309-405 124-206 (433)
110 3vu4_A KMHSV2; beta-propeller 95.5 0.064 2.2E-06 51.1 9.9 84 300-404 12-95 (355)
111 2oaj_A Protein SNI1; WD40 repe 95.4 0.04 1.4E-06 60.4 9.5 35 305-339 486-520 (902)
112 2hes_X YDR267CP; beta-propelle 95.4 0.049 1.7E-06 51.1 8.6 82 302-400 148-231 (330)
113 2pm9_A Protein WEB1, protein t 95.3 0.067 2.3E-06 50.2 9.3 83 304-403 162-253 (416)
114 1jmx_B Amine dehydrogenase; ox 95.1 0.091 3.1E-06 47.9 9.5 76 308-405 255-331 (349)
115 3bws_A Protein LP49; two-domai 95.0 0.11 3.7E-06 49.5 10.0 84 303-404 165-248 (433)
116 3vgz_A Uncharacterized protein 94.9 0.16 5.5E-06 46.5 10.5 81 310-404 187-267 (353)
117 1pby_B Quinohemoprotein amine 94.8 0.16 5.6E-06 45.8 10.2 75 308-404 241-315 (337)
118 3vgz_A Uncharacterized protein 94.7 0.21 7.3E-06 45.6 10.7 76 309-404 232-308 (353)
119 4h5i_A Guanine nucleotide-exch 94.1 0.28 9.4E-06 47.0 10.5 92 34-128 224-321 (365)
120 2xyi_A Probable histone-bindin 94.0 0.31 1.1E-05 47.4 10.8 81 303-401 227-311 (430)
121 2xyi_A Probable histone-bindin 93.9 0.27 9.3E-06 47.8 10.2 85 299-401 173-265 (430)
122 4gq1_A NUP37; propeller, trans 93.8 0.14 4.8E-06 49.4 7.9 85 302-404 131-223 (393)
123 1nir_A Nitrite reductase; hemo 93.7 0.33 1.1E-05 50.0 11.0 80 310-405 181-263 (543)
124 2j04_A TAU60, YPL007P, hypothe 93.6 0.17 5.9E-06 54.0 8.8 78 308-402 130-214 (588)
125 3u4y_A Uncharacterized protein 93.5 0.35 1.2E-05 44.1 9.6 80 307-405 40-123 (331)
126 2oit_A Nucleoporin 214KDA; NH2 93.0 0.3 1E-05 48.6 8.9 79 303-401 145-224 (434)
127 2j04_B YDR362CP, TAU91; beta p 92.9 0.25 8.7E-06 50.9 8.6 84 302-404 261-347 (524)
128 1jmx_B Amine dehydrogenase; ox 92.8 0.33 1.1E-05 44.2 8.2 75 313-404 5-79 (349)
129 1pby_B Quinohemoprotein amine 92.7 0.39 1.3E-05 43.3 8.6 38 310-347 84-133 (337)
130 2oit_A Nucleoporin 214KDA; NH2 92.7 0.13 4.5E-06 51.2 5.9 79 307-403 92-185 (434)
131 3bg1_A Protein SEC13 homolog; 92.6 0.29 1E-05 45.5 7.8 83 302-401 52-138 (316)
132 2w18_A PALB2, fancn, partner a 92.6 0.33 1.1E-05 48.8 8.5 95 306-406 110-219 (356)
133 3o4h_A Acylamino-acid-releasin 91.7 0.15 5.2E-06 51.5 5.0 84 303-403 190-278 (582)
134 2ojh_A Uncharacterized protein 91.2 0.55 1.9E-05 40.9 7.5 46 303-349 37-83 (297)
135 1k32_A Tricorn protease; prote 91.0 0.52 1.8E-05 51.8 8.7 46 305-350 376-421 (1045)
136 2w18_A PALB2, fancn, partner a 91.0 0.55 1.9E-05 47.1 8.2 68 312-397 288-355 (356)
137 1ri6_A Putative isomerase YBHE 91.0 0.66 2.3E-05 41.9 8.0 33 308-340 38-73 (343)
138 4gq1_A NUP37; propeller, trans 90.9 0.56 1.9E-05 45.1 7.9 100 303-404 182-291 (393)
139 3u4y_A Uncharacterized protein 90.6 1.1 3.6E-05 40.8 9.1 74 310-402 178-255 (331)
140 1ri6_A Putative isomerase YBHE 90.3 1.7 5.8E-05 39.1 10.2 31 307-337 230-261 (343)
141 2j04_A TAU60, YPL007P, hypothe 90.3 0.78 2.7E-05 49.0 9.0 75 307-402 85-163 (588)
142 3scy_A Hypothetical bacterial 90.0 2.5 8.4E-05 39.3 11.3 77 310-405 261-345 (361)
143 2hqs_A Protein TOLB; TOLB, PAL 90.0 1.6 5.3E-05 42.7 10.3 48 302-350 173-223 (415)
144 2oiz_A Aromatic amine dehydrog 89.5 1.4 4.6E-05 42.4 9.3 71 313-405 259-342 (361)
145 2j04_B YDR362CP, TAU91; beta p 89.5 0.42 1.4E-05 49.3 6.0 72 310-400 358-429 (524)
146 1nir_A Nitrite reductase; hemo 88.9 0.7 2.4E-05 47.5 7.2 70 315-405 145-217 (543)
147 3pe7_A Oligogalacturonate lyas 88.4 0.84 2.9E-05 42.6 6.8 70 313-403 41-115 (388)
148 3hfq_A Uncharacterized protein 88.3 1 3.5E-05 41.6 7.3 73 308-398 40-116 (347)
149 3hfq_A Uncharacterized protein 87.7 3.8 0.00013 37.6 10.8 30 308-337 240-270 (347)
150 2ecf_A Dipeptidyl peptidase IV 87.1 2.2 7.4E-05 44.0 9.5 44 307-350 36-85 (741)
151 3scy_A Hypothetical bacterial 85.7 4.5 0.00016 37.5 10.1 77 308-403 50-133 (361)
152 2hqs_A Protein TOLB; TOLB, PAL 84.9 3 0.0001 40.6 8.8 44 305-348 308-354 (415)
153 1jof_A Carboxy-CIS,CIS-muconat 84.8 5.7 0.00019 37.4 10.5 37 307-343 144-182 (365)
154 2z3z_A Dipeptidyl aminopeptida 84.1 3 0.0001 42.7 8.8 40 308-347 181-253 (706)
155 3fvz_A Peptidyl-glycine alpha- 83.6 6.9 0.00024 36.4 10.4 82 309-405 144-233 (329)
156 3o4h_A Acylamino-acid-releasin 83.2 2.3 7.9E-05 42.8 7.4 73 311-403 153-231 (582)
157 2z3z_A Dipeptidyl aminopeptida 82.8 2.5 8.5E-05 43.4 7.6 71 309-403 83-159 (706)
158 1xfd_A DIP, dipeptidyl aminope 82.8 0.76 2.6E-05 47.2 3.7 40 310-350 19-58 (723)
159 3fvz_A Peptidyl-glycine alpha- 81.4 9.7 0.00033 35.4 10.5 39 308-346 24-86 (329)
160 2ojh_A Uncharacterized protein 81.2 6 0.0002 34.2 8.4 40 308-347 85-128 (297)
161 3c5m_A Oligogalacturonate lyas 81.1 3.7 0.00012 38.0 7.4 72 310-402 38-114 (396)
162 1z68_A Fibroblast activation p 81.0 1.8 6.2E-05 44.6 5.8 32 310-341 62-102 (719)
163 2ecf_A Dipeptidyl peptidase IV 80.9 5.1 0.00017 41.2 9.1 43 306-349 150-192 (741)
164 1qks_A Cytochrome CD1 nitrite 80.8 8.2 0.00028 40.2 10.7 81 310-405 199-281 (567)
165 3qqz_A Putative uncharacterize 79.7 12 0.00039 35.4 10.4 48 303-351 22-72 (255)
166 3e5z_A Putative gluconolactona 79.0 8.9 0.00031 34.5 9.2 45 301-347 21-66 (296)
167 1jof_A Carboxy-CIS,CIS-muconat 78.7 5 0.00017 37.8 7.6 35 309-343 255-297 (365)
168 2dg1_A DRP35, lactonase; beta 77.7 15 0.00051 33.4 10.3 44 302-345 39-82 (333)
169 3pe7_A Oligogalacturonate lyas 76.8 15 0.00052 33.9 10.3 39 312-350 85-123 (388)
170 2oiz_A Aromatic amine dehydrog 76.8 3 0.0001 40.0 5.5 35 310-345 307-343 (361)
171 3azo_A Aminopeptidase; POP fam 76.3 6 0.00021 40.1 7.9 44 307-350 241-286 (662)
172 1q7f_A NHL, brain tumor CG1071 76.3 14 0.00047 32.9 9.5 38 308-346 30-67 (286)
173 3sjl_D Methylamine dehydrogena 74.5 5.9 0.0002 39.8 7.1 74 314-405 39-124 (386)
174 2gop_A Trilobed protease; beta 74.3 10 0.00034 34.6 8.2 40 309-348 60-104 (347)
175 1z68_A Fibroblast activation p 73.8 2.7 9.3E-05 43.3 4.6 38 312-350 20-57 (719)
176 2iwa_A Glutamine cyclotransfer 73.7 27 0.00092 33.1 11.2 82 302-405 14-101 (266)
177 1xfd_A DIP, dipeptidyl aminope 72.7 9 0.00031 39.1 8.2 18 330-347 229-246 (723)
178 1q7f_A NHL, brain tumor CG1071 72.6 24 0.00083 31.2 10.2 38 309-347 208-246 (286)
179 2mad_H Methylamine dehydrogena 72.5 18 0.00062 35.1 10.0 76 311-405 270-356 (373)
180 3no2_A Uncharacterized protein 72.5 8.7 0.0003 35.5 7.3 34 313-347 130-163 (276)
181 1xip_A Nucleoporin NUP159; bet 71.7 32 0.0011 34.4 11.7 84 33-126 41-133 (388)
182 4a5s_A Dipeptidyl peptidase 4 70.9 5.3 0.00018 41.9 6.1 72 311-403 65-145 (740)
183 3sre_A PON1, serum paraoxonase 70.6 35 0.0012 33.6 11.6 91 303-403 45-152 (355)
184 3dsm_A Uncharacterized protein 70.2 19 0.00065 33.6 9.2 39 308-346 84-122 (328)
185 3azo_A Aminopeptidase; POP fam 70.1 15 0.00052 37.1 9.1 44 305-348 185-240 (662)
186 2ece_A 462AA long hypothetical 68.7 10 0.00035 39.3 7.5 37 309-346 139-181 (462)
187 2qe8_A Uncharacterized protein 65.8 37 0.0013 31.7 10.3 39 307-346 66-110 (343)
188 3e5z_A Putative gluconolactona 64.7 10 0.00034 34.2 5.9 40 308-347 69-108 (296)
189 3c5m_A Oligogalacturonate lyas 64.4 28 0.00097 31.9 9.0 38 313-350 86-123 (396)
190 2xdw_A Prolyl endopeptidase; a 64.2 21 0.00072 37.1 8.9 36 309-344 126-166 (710)
191 3iuj_A Prolyl endopeptidase; h 63.9 24 0.00083 36.8 9.4 49 308-356 129-183 (693)
192 1yiq_A Quinohemoprotein alcoho 62.6 11 0.00039 39.9 6.6 55 329-403 455-509 (689)
193 1mda_H Methylamine dehydrogena 62.4 15 0.00052 36.2 7.1 73 313-405 269-352 (368)
194 2mad_H Methylamine dehydrogena 62.3 8.7 0.0003 37.4 5.3 39 307-345 317-357 (373)
195 2bkl_A Prolyl endopeptidase; m 61.8 20 0.00068 37.2 8.2 35 308-342 121-160 (695)
196 3pbp_A Nucleoporin NUP82; beta 61.4 8.3 0.00028 39.9 5.1 76 33-108 69-157 (452)
197 1mda_H Methylamine dehydrogena 58.2 14 0.00049 36.4 6.0 41 309-349 315-357 (368)
198 3sjl_D Methylamine dehydrogena 57.8 13 0.00046 37.2 5.8 39 308-346 331-371 (386)
199 3c75_H MADH, methylamine dehyd 57.3 12 0.00042 37.8 5.5 38 308-345 370-409 (426)
200 2z2n_A Virginiamycin B lyase; 57.0 87 0.003 27.2 10.5 38 306-344 13-50 (299)
201 2dg1_A DRP35, lactonase; beta 56.8 81 0.0028 28.4 10.6 39 308-346 135-179 (333)
202 1rwi_B Serine/threonine-protei 56.5 43 0.0015 29.1 8.4 36 308-343 192-227 (270)
203 3dsm_A Uncharacterized protein 55.9 70 0.0024 29.6 10.2 74 309-403 45-118 (328)
204 3c75_H MADH, methylamine dehyd 55.6 26 0.00088 35.4 7.6 76 312-405 323-408 (426)
205 2qc5_A Streptogramin B lactona 55.5 97 0.0033 26.9 10.6 40 303-343 15-54 (300)
206 3no2_A Uncharacterized protein 54.7 82 0.0028 28.8 10.4 50 312-361 169-220 (276)
207 4a5s_A Dipeptidyl peptidase 4 54.4 20 0.00067 37.6 6.7 39 310-350 19-57 (740)
208 3g4e_A Regucalcin; six bladed 54.4 15 0.00052 33.5 5.2 41 308-348 199-239 (297)
209 1qks_A Cytochrome CD1 nitrite 53.5 25 0.00084 36.6 7.2 47 303-349 498-549 (567)
210 1kb0_A Quinohemoprotein alcoho 52.4 21 0.00073 37.7 6.6 27 92-118 130-157 (677)
211 3g4e_A Regucalcin; six bladed 51.6 72 0.0024 28.9 9.3 32 310-341 151-185 (297)
212 1k32_A Tricorn protease; prote 50.8 22 0.00076 38.9 6.6 47 303-350 48-100 (1045)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 50.6 60 0.0021 28.7 8.5 37 309-346 118-169 (314)
214 2hz6_A Endoplasmic reticulum t 46.0 24 0.00083 33.8 5.4 65 318-403 8-72 (369)
215 2iwa_A Glutamine cyclotransfer 45.0 57 0.002 30.8 7.7 34 313-346 110-143 (266)
216 1yr2_A Prolyl oligopeptidase; 44.5 1.2E+02 0.0041 31.6 10.8 45 304-348 264-316 (741)
217 2xzh_A Clathrin heavy chain 1; 43.9 21 0.0007 36.0 4.5 67 91-166 272-342 (365)
218 3al9_A Plexin-A2; beta-propell 43.1 79 0.0027 33.0 9.1 71 77-156 400-478 (539)
219 3hrp_A Uncharacterized protein 43.0 41 0.0014 32.8 6.6 41 309-349 132-172 (409)
220 2ghs_A AGR_C_1268P; regucalcin 41.5 1.4E+02 0.005 27.4 9.9 30 310-339 181-213 (326)
221 1pjx_A Dfpase, DIISOPROPYLFLUO 40.6 1.4E+02 0.0048 26.2 9.3 39 308-346 226-264 (314)
222 2bkl_A Prolyl endopeptidase; m 40.4 99 0.0034 31.9 9.3 46 303-348 222-271 (695)
223 1rwi_B Serine/threonine-protei 40.3 1E+02 0.0034 26.6 8.1 34 310-343 152-185 (270)
224 2z2n_A Virginiamycin B lyase; 39.2 1.9E+02 0.0064 25.0 10.5 36 308-344 141-176 (299)
225 1yr2_A Prolyl oligopeptidase; 39.1 36 0.0012 35.6 5.8 36 309-344 164-204 (741)
226 2qe8_A Uncharacterized protein 38.9 32 0.0011 32.2 4.9 38 310-347 122-163 (343)
227 1npe_A Nidogen, entactin; glyc 38.0 2.1E+02 0.0071 25.1 10.6 39 308-346 167-206 (267)
228 3hrp_A Uncharacterized protein 35.3 60 0.002 31.7 6.4 33 313-345 176-210 (409)
229 2xdw_A Prolyl endopeptidase; a 34.7 2.3E+02 0.0078 29.1 11.0 32 307-338 232-268 (710)
230 1bpo_A Protein (clathrin); cla 34.0 35 0.0012 35.7 4.5 68 90-166 270-341 (494)
231 3zwu_A Alkaline phosphatase PH 33.1 1.3E+02 0.0046 31.7 9.0 47 310-356 478-536 (592)
232 2qc5_A Streptogramin B lactona 32.8 2.4E+02 0.0082 24.3 10.8 34 308-342 62-95 (300)
233 2ad6_A Methanol dehydrogenase 32.5 92 0.0031 32.1 7.5 26 92-117 117-143 (571)
234 3dr2_A Exported gluconolactona 31.8 63 0.0022 29.3 5.6 36 308-344 86-121 (305)
235 2gop_A Trilobed protease; beta 28.2 1E+02 0.0034 27.8 6.2 36 310-345 106-168 (347)
236 1yiq_A Quinohemoprotein alcoho 27.7 2.8E+02 0.0096 29.1 10.4 22 382-403 321-342 (689)
237 1flg_A Protein (quinoprotein e 27.1 79 0.0027 32.7 5.9 57 327-403 464-520 (582)
238 1xip_A Nucleoporin NUP159; bet 26.1 91 0.0031 31.0 5.9 48 77-128 163-222 (388)
239 3iuj_A Prolyl endopeptidase; h 25.8 3E+02 0.01 28.5 10.0 45 307-352 233-283 (693)
240 3ei3_A DNA damage-binding prot 25.7 1.6E+02 0.0056 33.4 8.6 79 34-117 516-600 (1158)
241 3dr2_A Exported gluconolactona 25.6 61 0.0021 29.4 4.3 31 310-340 190-226 (305)
242 3nol_A Glutamine cyclotransfer 23.5 4.6E+02 0.016 24.7 10.1 36 310-346 45-82 (262)
243 3nok_A Glutaminyl cyclase; bet 23.4 3E+02 0.01 26.2 8.7 44 301-345 47-91 (268)
244 1kv9_A Type II quinohemoprotei 22.9 1.4E+02 0.0048 31.3 6.9 26 92-117 119-145 (668)
245 1kv9_A Type II quinohemoprotei 22.8 3.5E+02 0.012 28.2 10.0 27 92-118 68-95 (668)
246 3ei3_A DNA damage-binding prot 22.8 67 0.0023 36.6 4.7 34 75-108 827-872 (1158)
247 1kb0_A Quinohemoprotein alcoho 22.8 3.8E+02 0.013 27.9 10.3 23 382-404 329-351 (677)
248 2ghs_A AGR_C_1268P; regucalcin 22.2 1.4E+02 0.0047 27.6 6.0 38 309-347 231-268 (326)
249 3oky_A Plexin-A2; transmembran 22.1 2E+02 0.0069 31.0 8.0 71 78-157 400-478 (681)
250 2fp8_A Strictosidine synthase; 21.7 1.6E+02 0.0054 26.8 6.3 37 310-347 231-277 (322)
251 2l1s_A Uncharacterized protein 21.5 85 0.0029 25.0 3.7 41 303-348 37-78 (83)
252 3q7x_A De novo designed beta-t 20.8 3.1E+02 0.011 23.0 7.5 56 305-360 11-86 (132)
253 3nvn_B Plexin-C1; beta-propell 20.4 3.7E+02 0.013 27.9 9.2 73 77-157 340-419 (476)
254 1olz_A Semaphorin 4D; developm 20.2 4.3E+02 0.015 28.2 10.1 73 77-156 397-479 (663)
255 4fww_A Macrophage-stimulating 20.0 2.6E+02 0.009 28.5 8.2 91 76-176 404-507 (527)
No 1
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.58 E-value=3.5e-05 Score=69.56 Aligned_cols=94 Identities=11% Similarity=0.124 Sum_probs=62.3
Q ss_pred eeeeccCcceeeeeecceEE-EEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEec-CC--
Q 015021 34 NLLCALDMHTIALANRYQTV-IINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDL-KG-- 109 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v-~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G-- 109 (414)
.++.+|++++||.+.....| +-..... .........+.. ....|+++.|.|-.|-..++.|..+|.|++|+. .|
T Consensus 16 ~~~~~~~~~~l~~~~~dg~i~iw~~~~~-~~~~~~~~~~~~-~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~ 93 (351)
T 3f3f_A 16 DVVYDFYGRHVATCSSDQHIKVFKLDKD-TSNWELSDSWRA-HDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQE 93 (351)
T ss_dssp EEEECSSSSEEEEEETTSEEEEEEECSS-SCCEEEEEEEEC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSC
T ss_pred EEEEcCCCCEEEEeeCCCeEEEEECCCC-CCcceecceecc-CCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcc
Confidence 36678999999988766433 3233222 111222223322 246799999988756678999999999999995 44
Q ss_pred -------cEEeecccCccceeEEEEec
Q 015021 110 -------DLVHRQLIHPGRILKLRVRG 129 (414)
Q Consensus 110 -------~LL~sQ~lh~~pV~~ik~r~ 129 (414)
.++..-.-|..+|..+.+-.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~v~~~~~~~ 120 (351)
T 3f3f_A 94 ECSGRRWNKLCTLNDSKGSLYSVKFAP 120 (351)
T ss_dssp TTSSCSEEEEEEECCCSSCEEEEEECC
T ss_pred cccccCcceeeeecccCCceeEEEEcC
Confidence 44555567888999888643
No 2
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.52 E-value=0.00012 Score=67.53 Aligned_cols=81 Identities=10% Similarity=0.078 Sum_probs=62.0
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceee-EEEEEecccccccccccCCCCCcceEEEEEEc
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV-FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA 386 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~-wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIya 386 (414)
.....++.+|++++++++...|.|.++|+.++..++.++|+.+.... +.... ..+ + -+++-+
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~------~~l~sg 255 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS-VTG----------G------KWIVSG 255 (312)
T ss_dssp CCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE-CSS----------S------CEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE-eCC----------C------cEEEEE
Confidence 34567899999999999999999999999999999999998874322 11111 100 1 145678
Q ss_pred CCCCeEEEeeCCCCcceee
Q 015021 387 PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 387 prRg~lEvW~~~~g~~v~~ 405 (414)
..+|.|.||++++++.+.+
T Consensus 256 ~~dg~i~vwd~~~~~~~~~ 274 (312)
T 4ery_A 256 SEDNLVYIWNLQTKEIVQK 274 (312)
T ss_dssp CTTSCEEEEETTTCCEEEE
T ss_pred CCCCEEEEEECCCchhhhh
Confidence 8999999999999988743
No 3
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.45 E-value=0.00011 Score=69.05 Aligned_cols=83 Identities=11% Similarity=-0.002 Sum_probs=62.9
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+.........++.+|++++++++...|.|.++|+.++..++.++++.. .+....-.+ +. +
T Consensus 243 ~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~-------------~~---~ 302 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ----SIVSASWVG-------------DD---K 302 (425)
T ss_dssp ECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS----CEEEEEEET-------------TT---E
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc----cEEEEEECC-------------CC---E
Confidence 344556678999999999999999999999999999999999988766 222211111 11 4
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++.+..+|.|.+|++++++.+.+
T Consensus 303 l~~~~~d~~i~i~d~~~~~~~~~ 325 (425)
T 1r5m_A 303 VISCSMDGSVRLWSLKQNTLLAL 325 (425)
T ss_dssp EEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEeCCCcEEEEECCCCcEeEe
Confidence 45667799999999999987744
No 4
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.35 E-value=5.5e-05 Score=75.32 Aligned_cols=244 Identities=14% Similarity=0.146 Sum_probs=142.4
Q ss_pred CeeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCe-EEEEEeEEeCCcEEEEEeccccEEEEEec-CC-
Q 015021 33 PNLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEY-ITAIEWLVFEEMRALAVGTSRGYFLVYDL-KG- 109 (414)
Q Consensus 33 ~~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~-ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G- 109 (414)
..++.||+|++||++.+..+.+-...... ........+.. ..+. |+++.+-|..|-..++.|..+|.|++|+. +|
T Consensus 22 ~~~~~spdg~~l~~~~~~~v~v~~~~~~~-~~~~~~~~~~~-h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~ 99 (615)
T 1pgu_A 22 THLSYDPTTNAIAYPCGKSAFVRCLDDGD-SKVPPVVQFTG-HGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDK 99 (615)
T ss_dssp CCCEEETTTTEEEEEETTEEEEEECCSSC-CSSCSEEEECT-TTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEG
T ss_pred eEEEECCCCCEEEEecCCeEEEEECCCCC-CccccceEEec-CCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCc
Confidence 45789999999999998876664433220 00111122222 2466 99998887657778999999999999996 44
Q ss_pred -------cEEeecccCccceeEEEEecccCCCCCCCCCCeEEEEeCC-----eEEEEeChhHHHHHHHHHHhccccccCC
Q 015021 110 -------DLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPG-----VLARFDGSEIQKMLQRWFQDSNSNFWDQ 177 (414)
Q Consensus 110 -------~LL~sQ~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~-----~iv~IdG~sL~~~Lr~c~~~~~~~~w~~ 177 (414)
.++..-.-|..+|..+.+-.. .+.|.+...+ .|. .|+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~~s~~---------~~~l~~~~~~~~~~~~v~---------------------~~d~ 149 (615)
T 1pgu_A 100 ESNSVEVNVKSEFQVLAGPISDISWDFE---------GRRLCVVGEGRDNFGVFI---------------------SWDS 149 (615)
T ss_dssp GGTEEEEEEEEEEECCSSCEEEEEECTT---------SSEEEEEECCSSCSEEEE---------------------ETTT
T ss_pred ccccccccccchhhcccccEEEEEEeCC---------CCEEEEeccCCCCccEEE---------------------EEEC
Confidence 555555568888888885421 2223333222 111 1110
Q ss_pred CCccCCCcccccccCCccceeccc-CCCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhh
Q 015021 178 KPKQRDSEDLENSYERLPHQLWNV-SKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVG 256 (414)
Q Consensus 178 ~~~~~~~~~~~~~~~~L~ykKW~l-~~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~ 256 (414)
.. ....+ ...+.+...++.- .+.+.+++.+.+-.+-+|......
T Consensus 150 -------~~----------~~~~~~~~~~~v~~~~~~~------------~~~~~l~~~~~d~~v~vwd~~~~~------ 194 (615)
T 1pgu_A 150 -------GN----------SLGEVSGHSQRINACHLKQ------------SRPMRSMTVGDDGSVVFYQGPPFK------ 194 (615)
T ss_dssp -------CC----------EEEECCSCSSCEEEEEECS------------SSSCEEEEEETTTEEEEEETTTBE------
T ss_pred -------CC----------cceeeecCCccEEEEEECC------------CCCcEEEEEeCCCcEEEEeCCCcc------
Confidence 00 00001 1122344433321 111124555554444444321110
Q ss_pred hhhhhhhHHHHHHhhhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCc---eeeEEEECCC-CCEEEEEcCCCcEE
Q 015021 257 AILSKVVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPR---KGERLTLSPS-GSLAAITDSLGRIL 332 (414)
Q Consensus 257 al~S~va~av~S~v~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R---~~~~i~~sP~-~~laa~tD~lGRV~ 332 (414)
++..+..... .+.+++.+|+ ++++++....|.|.
T Consensus 195 ------------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 195 ------------------------------------------FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKIS 232 (615)
T ss_dssp ------------------------------------------EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEE
T ss_pred ------------------------------------------eeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEE
Confidence 1111222333 6889999999 99999999999999
Q ss_pred EEEcCcceeEeee-c---ccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 333 LLDTQALVVVRLW-K---GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 333 L~D~~~~~vvrmw-K---GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++|+.++..++.+ + ++.+ .+....-.+ ++ +++-+-.+|.|.+|++++++.+.+
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~----~v~~~~~~~----------~~------~l~~~~~d~~i~~wd~~~~~~~~~ 289 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQG----GIFALSWLD----------SQ------KFATVGADATIRVWDVTTSKCVQK 289 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCS----CEEEEEESS----------SS------EEEEEETTSEEEEEETTTTEEEEE
T ss_pred EEECCCCCEeEEecccccccCC----ceEEEEEcC----------CC------EEEEEcCCCcEEEEECCCCcEEEE
Confidence 9999999999998 6 6665 222221111 11 345566789999999999987743
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.35 E-value=0.00067 Score=63.11 Aligned_cols=88 Identities=14% Similarity=0.126 Sum_probs=61.0
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcEE
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDLV 112 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~LL 112 (414)
.++.||++.+||.+-...-|.+ |+-.....+ ..+.. ....|+++.+.| +-..++.|-.+|.|++|+ ++|.++
T Consensus 18 ~~~fsp~~~~l~s~~~dg~v~l-Wd~~~~~~~---~~~~~-~~~~v~~~~~~~--~~~~l~s~s~d~~i~vwd~~~~~~~ 90 (304)
T 2ynn_A 18 GIDFHPTEPWVLTTLYSGRVEL-WNYETQVEV---RSIQV-TETPVRAGKFIA--RKNWIIVGSDDFRIRVFNYNTGEKV 90 (304)
T ss_dssp EEEECSSSSEEEEEETTSEEEE-EETTTTEEE---EEEEC-CSSCEEEEEEEG--GGTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEEcCCCcEEE-EECCCCcee---EEeec-cCCcEEEEEEeC--CCCEEEEECCCCEEEEEECCCCcEE
Confidence 4678899999888876654332 554432111 11211 235577776654 556799999999999999 689888
Q ss_pred eecccCccceeEEEEe
Q 015021 113 HRQLIHPGRILKLRVR 128 (414)
Q Consensus 113 ~sQ~lh~~pV~~ik~r 128 (414)
..-.-|.++|..|.+.
T Consensus 91 ~~~~~h~~~v~~~~~~ 106 (304)
T 2ynn_A 91 VDFEAHPDYIRSIAVH 106 (304)
T ss_dssp EEEECCSSCEEEEEEC
T ss_pred EEEeCCCCcEEEEEEc
Confidence 8777899999998864
No 6
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.32 E-value=0.00053 Score=63.56 Aligned_cols=256 Identities=11% Similarity=0.009 Sum_probs=139.7
Q ss_pred CeeeeccCcceeeeeecc-eEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCc
Q 015021 33 PNLLCALDMHTIALANRY-QTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGD 110 (414)
Q Consensus 33 ~~~~~sp~~~~la~A~~~-~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~ 110 (414)
..++.+|++++||++... .+.+-..... .......+.. ....|+++.|-| +-..++.|..+|.|++|+ +++.
T Consensus 12 ~~~~~s~~~~~l~~~~~d~~v~i~~~~~~---~~~~~~~~~~-h~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~ 85 (372)
T 1k8k_C 12 SCHAWNKDRTQIAICPNNHEVHIYEKSGN---KWVQVHELKE-HNGQVTGVDWAP--DSNRIVTCGTDRNAYVWTLKGRT 85 (372)
T ss_dssp CEEEECTTSSEEEEECSSSEEEEEEEETT---EEEEEEEEEC-CSSCEEEEEEET--TTTEEEEEETTSCEEEEEEETTE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEeCCCC---cEEeeeeecC-CCCcccEEEEeC--CCCEEEEEcCCCeEEEEECCCCe
Confidence 357788999999998544 4333222221 1112222322 246799998876 566888999999999999 4665
Q ss_pred EEeec--ccCccceeEEEEecccCCCCCCCCCCeEEEEeCCe-EEEEeChhHHHHHHHHHHhccccccCCCCccCCCccc
Q 015021 111 LVHRQ--LIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGV-LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDL 187 (414)
Q Consensus 111 LL~sQ--~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~-iv~IdG~sL~~~Lr~c~~~~~~~~w~~~~~~~~~~~~ 187 (414)
+.... .-|..+|..+.+... .+.|.+...+. +...|-. .+ . .
T Consensus 86 ~~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~d~~v~i~d~~--------------~~-------~----~- 130 (372)
T 1k8k_C 86 WKPTLVILRINRAARCVRWAPN---------EKKFAVGSGSRVISICYFE--------------QE-------N----D- 130 (372)
T ss_dssp EEEEEECCCCSSCEEEEEECTT---------SSEEEEEETTSSEEEEEEE--------------TT-------T----T-
T ss_pred eeeeEEeecCCCceeEEEECCC---------CCEEEEEeCCCEEEEEEec--------------CC-------C----c-
Confidence 44433 346788888875421 23344443332 2211100 00 0 0
Q ss_pred ccccCCccceecccCCCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhhhhHHHH
Q 015021 188 ENSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATF 267 (414)
Q Consensus 188 ~~~~~~L~ykKW~l~~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~va~av~ 267 (414)
. ...+.-.......+.+.++.- ++.+ +++.+.+-.+-+|......... .
T Consensus 131 ---~--~~~~~~~~~~~~~i~~~~~~~------------~~~~-l~~~~~dg~i~~~d~~~~~~~~-----------~-- 179 (372)
T 1k8k_C 131 ---W--WVCKHIKKPIRSTVLSLDWHP------------NSVL-LAAGSCDFKCRIFSAYIKEVEE-----------R-- 179 (372)
T ss_dssp ---E--EEEEEECTTCCSCEEEEEECT------------TSSE-EEEEETTSCEEEEECCCTTTSC-----------C--
T ss_pred ---c--eeeeeeecccCCCeeEEEEcC------------CCCE-EEEEcCCCCEEEEEcccccccc-----------c--
Confidence 0 000000011123344444421 1111 4455555555555432211000 0
Q ss_pred HHhhhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecc
Q 015021 268 STISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 268 S~v~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKG 347 (414)
.. ...|+.. .+ ...++..+........+++.+|++++++++...|+|.++|+.++..++.+++
T Consensus 180 ----~~-~~~~~~~--------~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 180 ----PA-PTPWGSK--------MP----FGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp ----CC-CBTTBSC--------CC----TTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred ----cc-ccccccc--------cc----hhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEcc
Confidence 00 0122111 00 0123334666777889999999999999999999999999999999999998
Q ss_pred cccc--eeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCC
Q 015021 348 YRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMA 399 (414)
Q Consensus 348 yRdA--q~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~ 399 (414)
+... .+.|. ++ .. +|+ -+ .+|.|.+|+++.
T Consensus 243 ~~~~v~~~~~~------~~-------------~~-~l~-~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 243 ETLPLLAVTFI------TE-------------SS-LVA-AG-HDCFPVLFTYDS 274 (372)
T ss_dssp SSCCEEEEEEE------ET-------------TE-EEE-EE-TTSSCEEEEEET
T ss_pred CCCCeEEEEEe------cC-------------CC-EEE-EE-eCCeEEEEEccC
Confidence 8652 12221 10 01 333 33 899999999998
No 7
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.28 E-value=0.00029 Score=64.84 Aligned_cols=272 Identities=9% Similarity=0.028 Sum_probs=143.3
Q ss_pred eeeccC----cceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEec-CC
Q 015021 35 LLCALD----MHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDL-KG 109 (414)
Q Consensus 35 ~~~sp~----~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G 109 (414)
++.+|+ +.+|+.+.....|. -|+-.....+ ..+.. ....|+++.|-|- +-..++.|..+|.|++|+. +|
T Consensus 75 ~~~~~~~~~~~~~l~~~~~dg~i~-v~d~~~~~~~---~~~~~-~~~~i~~~~~~~~-~~~~l~s~~~dg~i~iwd~~~~ 148 (366)
T 3k26_A 75 CAWTYDSNTSHPLLAVAGSRGIIR-IINPITMQCI---KHYVG-HGNAINELKFHPR-DPNLLLSVSKDHALRLWNIQTD 148 (366)
T ss_dssp EEEEECTTTCCEEEEEEETTCEEE-EECTTTCCEE---EEEES-CCSCEEEEEECSS-CTTEEEEEETTSCEEEEETTTT
T ss_pred EEeccCCCCCCCEEEEecCCCEEE-EEEchhceEe---eeecC-CCCcEEEEEECCC-CCCEEEEEeCCCeEEEEEeecC
Confidence 445566 55666666554322 2443321111 11221 2467999888763 5568899999999999994 67
Q ss_pred cEEeec---ccCccceeEEEEecccCCCCCCCCCCeEEEEeCC-eEEEEeChh--HHHHHHHHHHhccccccCCCCccCC
Q 015021 110 DLVHRQ---LIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPG-VLARFDGSE--IQKMLQRWFQDSNSNFWDQKPKQRD 183 (414)
Q Consensus 110 ~LL~sQ---~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~-~iv~IdG~s--L~~~Lr~c~~~~~~~~w~~~~~~~~ 183 (414)
..+..- .-|..+|..+.+... .+.|.....+ .|...|-.. ....++.. ..-. .+
T Consensus 149 ~~~~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~---~~~~--------~~ 208 (366)
T 3k26_A 149 TLVAIFGGVEGHRDEVLSADYDLL---------GEKIMSCGMDHSLKLWRINSKRMMNAIKES---YDYN--------PN 208 (366)
T ss_dssp EEEEEECSTTSCSSCEEEEEECTT---------SSEEEEEETTSCEEEEESCSHHHHHHHHHH---HTCC--------GG
T ss_pred eEEEEecccccccCceeEEEECCC---------CCEEEEecCCCCEEEEECCCCcccccccee---EEec--------CC
Confidence 666654 468999999986431 3345555444 465555443 33333321 1100 00
Q ss_pred CcccccccCCccceecccC--CCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhh
Q 015021 184 SEDLENSYERLPHQLWNVS--KYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSK 261 (414)
Q Consensus 184 ~~~~~~~~~~L~ykKW~l~--~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~ 261 (414)
...............+... ..+.+...++.| . .+++.+.+-.+-+|........ .
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------------~-~l~~~~~d~~i~~wd~~~~~~~------~-- 265 (366)
T 3k26_A 209 KTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG--------------D-LILSKSCENAIVCWKPGKMEDD------I-- 265 (366)
T ss_dssp GCSSCCCCEEECCCSEEECSSCSSCCCEEEEET--------------T-EEEEECSSSEEEEEEESSTTCC------G--
T ss_pred CCcccccceeeccCccccccCCcceEEEEEEcC--------------C-EEEEEecCCEEEEEeCCCcccc------c--
Confidence 0000000000111111111 223444444431 1 1566666777766655433221 0
Q ss_pred hhHHHHHHhhhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECCC--CCEEEEEcCCCcEEEEEcCcc
Q 015021 262 VVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPS--GSLAAITDSLGRILLLDTQAL 339 (414)
Q Consensus 262 va~av~S~v~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP~--~~laa~tD~lGRV~L~D~~~~ 339 (414)
..+ ...... ..++..+......+..++.+|+ ++++|+.+..|.|.++|+.++
T Consensus 266 ---------~~~-----------~~~~~~------~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~ 319 (366)
T 3k26_A 266 ---------DKI-----------KPSESN------VTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVE 319 (366)
T ss_dssp ---------GGC-----------CTTCCC------EEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSS
T ss_pred ---------ccc-----------ccCCcc------hheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCC
Confidence 000 000000 1122334555556777888888 999999999999999999998
Q ss_pred e----eEeeecccc-cceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCC
Q 015021 340 V----VVRLWKGYR-DASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMA 399 (414)
Q Consensus 340 ~----vvrmwKGyR-dAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~ 399 (414)
. .+..+++++ ...+.-+... ++ ++ +++-+-.+|.|.||++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~v~~~~~s---~~---------~~------~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 320 DPHKAKCTTLTHHKCGAAIRQTSFS---RD---------SS------ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp SGGGCEEEEECCTTCCSCEEEEEEC---TT---------SS------EEEEEETTSEEEEEEC--
T ss_pred CCccccceEEcccccCCceEEEEeC---CC---------CC------eEEEEeCCCEEEEEEecC
Confidence 6 445788875 2222222221 11 11 445677899999999864
No 8
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.24 E-value=0.00076 Score=60.76 Aligned_cols=235 Identities=8% Similarity=0.053 Sum_probs=134.0
Q ss_pred eeeeccCcceeeeeecceEEE-Ee-ecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEecCCcE
Q 015021 34 NLLCALDMHTIALANRYQTVI-IN-WADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDL 111 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~-~~-w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~L 111 (414)
.++.+|+++.|+.+.....+. -. |..... . ....+.. ....|+++.+ +...+++|..+|.|++|+ .+..
T Consensus 64 ~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~-~--~~~~~~~-~~~~i~~~~~----~~~~l~~~~~d~~i~~~d-~~~~ 134 (313)
T 3odt_A 64 SVCYDSEKELLLFGGKDTMINGVPLFATSGE-D--PLYTLIG-HQGNVCSLSF----QDGVVISGSWDKTAKVWK-EGSL 134 (313)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEETTCCTTS-C--C-CEECC-CSSCEEEEEE----ETTEEEEEETTSEEEEEE-TTEE
T ss_pred EEEECCCCCEEEEecCCCeEEEEEeeecCCC-C--cccchhh-cccCEEEEEe----cCCEEEEEeCCCCEEEEc-CCcE
Confidence 356778888888776664432 22 222211 1 1111222 2466888776 455899999999999999 7888
Q ss_pred EeecccCccceeEEEEecccCCCCCCCCCCeEEEEeCCe-EEEEeChhHHHHHHHHHHhccccccCCCCccCCCcccccc
Q 015021 112 VHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGV-LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENS 190 (414)
Q Consensus 112 L~sQ~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~-iv~IdG~sL~~~Lr~c~~~~~~~~w~~~~~~~~~~~~~~~ 190 (414)
+.....|..+|..+.+-... .+.+.....+. +...|.. +.
T Consensus 135 ~~~~~~~~~~v~~~~~~~~~--------~~~l~~~~~d~~i~i~d~~--------------~~----------------- 175 (313)
T 3odt_A 135 VYNLQAHNASVWDAKVVSFS--------ENKFLTASADKTIKLWQND--------------KV----------------- 175 (313)
T ss_dssp EEEEECCSSCEEEEEEEETT--------TTEEEEEETTSCEEEEETT--------------EE-----------------
T ss_pred EEecccCCCceeEEEEccCC--------CCEEEEEECCCCEEEEecC--------------ce-----------------
Confidence 88888899999988865422 22344444332 4333300 00
Q ss_pred cCCccceecccCCCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhhhhHHHHHHh
Q 015021 191 YERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTI 270 (414)
Q Consensus 191 ~~~L~ykKW~l~~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~va~av~S~v 270 (414)
.+.+.......+...++.- .+. +++.+.+-.+-+|.....
T Consensus 176 -----~~~~~~~~~~~i~~~~~~~------------~~~--~~~~~~dg~i~i~d~~~~--------------------- 215 (313)
T 3odt_A 176 -----IKTFSGIHNDVVRHLAVVD------------DGH--FISCSNDGLIKLVDMHTG--------------------- 215 (313)
T ss_dssp -----EEEECSSCSSCEEEEEEEE------------TTE--EEEEETTSEEEEEETTTC---------------------
T ss_pred -----EEEEeccCcccEEEEEEcC------------CCe--EEEccCCCeEEEEECCch---------------------
Confidence 0001111122333333320 111 344444444433322111
Q ss_pred hhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 271 SSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 271 ~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
.++..+......+.+++.+|+|+ ++++...|+|.++|+.++..++.++++.+
T Consensus 216 ---------------------------~~~~~~~~~~~~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~ 267 (313)
T 3odt_A 216 ---------------------------DVLRTYEGHESFVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAI 267 (313)
T ss_dssp ---------------------------CEEEEEECCSSCEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSS
T ss_pred ---------------------------hhhhhhhcCCceEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCc
Confidence 01122334445678999999996 55667889999999999999999988865
Q ss_pred ceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 351 ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 351 Aq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
. +....-.++ .. ++ -+-.+|.|.||++++++.+.
T Consensus 268 ~----i~~~~~~~~------------~~--~~--~~~~dg~i~iw~~~~~~~~~ 301 (313)
T 3odt_A 268 S----IWSVDCMSN------------GD--II--VGSSDNLVRIFSQEKSRWAS 301 (313)
T ss_dssp C----EEEEEECTT------------SC--EE--EEETTSCEEEEESCGGGCCC
T ss_pred e----EEEEEEccC------------CC--EE--EEeCCCcEEEEeCCCCceee
Confidence 2 222111111 11 33 37789999999999988763
No 9
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.23 E-value=0.00056 Score=68.14 Aligned_cols=236 Identities=13% Similarity=0.199 Sum_probs=134.0
Q ss_pred eeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEecCCcEEee
Q 015021 35 LLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHR 114 (414)
Q Consensus 35 ~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~LL~s 114 (414)
++.+|+++.|+.+.....+- -|+.....-.. +.. ..+.|+++.+- ||...++.|..+|.|++|+.+|.++..
T Consensus 309 ~~~~~~~~~l~t~~~d~~i~-~w~~~~~~~~~----~~~-~~~~v~~~~~s--~~g~~l~~~~~dg~v~~~~~~~~~~~~ 380 (577)
T 2ymu_A 309 VAFSPDGQTIASASDDKTVK-LWNRNGQHLQT----LTG-HSSSVWGVAFS--PDGQTIASASDDKTVKLWNRNGQLLQT 380 (577)
T ss_dssp EEECTTSSEEEEEETTSCEE-EEETTSCEEEE----ECC-CSSCEEEEEEC--TTSSEEEEEETTSEEEEEETTCCEEEE
T ss_pred EEECCCCCEEEEEeCCCeEE-EEeCCCCeeEE----EeC-CCCCEEEEEEC--CCCCEEEEEeCCCEEEEEcCCCCEEEE
Confidence 56778888877766554322 25443321111 212 24567776543 577789999999999999999999988
Q ss_pred cccCccceeEEEEecccCCCCCCCCCCeEEEEeCCeEEEEeChhHHHHHHHHHHhccccccCCCCccCCCcccccccCCc
Q 015021 115 QLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLENSYERL 194 (414)
Q Consensus 115 Q~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~iv~IdG~sL~~~Lr~c~~~~~~~~w~~~~~~~~~~~~~~~~~~L 194 (414)
-.-|..+|..|.+-.. .+-|.....+..++| |+. . + . . ...+
T Consensus 381 ~~~~~~~v~~~~~s~d---------g~~l~~~~~d~~v~~--------------------~~~-~---~--~--~-~~~~ 422 (577)
T 2ymu_A 381 LTGHSSSVRGVAFSPD---------GQTIASASDDKTVKL--------------------WNR-N---G--Q--L-LQTL 422 (577)
T ss_dssp EECCSSCEEEEEECTT---------SSCEEEEETTSEEEE--------------------ECT-T---C--C--E-EEEE
T ss_pred ecCCCCCeEEEEECCC---------CCEEEEEeCCCEEEE--------------------EeC-C---C--C--E-EEEe
Confidence 8889999998875321 223444444332222 110 0 0 0 0 0000
Q ss_pred cceecccCCCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhhhhHHHHHHhhhhh
Q 015021 195 PHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFSTISSLS 274 (414)
Q Consensus 195 ~ykKW~l~~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~va~av~S~v~S~a 274 (414)
-.....+.+.++. | ++.+ +++++.+-.+-
T Consensus 423 ------~~~~~~v~~~~~s----~--------d~~~-l~~~~~d~~v~-------------------------------- 451 (577)
T 2ymu_A 423 ------TGHSSSVWGVAFS----P--------DDQT-IASASDDKTVK-------------------------------- 451 (577)
T ss_dssp ------ECCSSCEEEEEEC----T--------TSSE-EEEEETTSEEE--------------------------------
T ss_pred ------cCCCCCeEEEEEC----C--------CCCE-EEEEcCCCEEE--------------------------------
Confidence 0011233333331 0 1111 22222222222
Q ss_pred hhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceee
Q 015021 275 KMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCV 354 (414)
Q Consensus 275 k~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~ 354 (414)
.|..+. ..+..+.........++.+|+++++|++...|.|.++|. ++..++.++|+.+.
T Consensus 452 --~w~~~~---------------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~--- 510 (577)
T 2ymu_A 452 --LWNRNG---------------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS--- 510 (577)
T ss_dssp --EEETTS---------------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSC---
T ss_pred --EEECCC---------------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCC---
Confidence 331110 011224445566788999999999999999999999995 78889999998763
Q ss_pred EEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 355 FMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 355 wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+....-.+++ + +++-+-.+|.|.||+. +|+++.+
T Consensus 511 -v~~l~~s~dg---------~------~l~s~~~dg~v~lwd~-~~~~~~~ 544 (577)
T 2ymu_A 511 -VRGVAFSPDG---------Q------TIASASDDKTVKLWNR-NGQLLQT 544 (577)
T ss_dssp -EEEEEECTTS---------S------CEEEEETTSEEEEECT-TSCEEEE
T ss_pred -EEEEEEcCCC---------C------EEEEEECcCEEEEEeC-CCCEEEE
Confidence 3222111111 1 2345778999999995 6777754
No 10
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.23 E-value=0.00024 Score=73.28 Aligned_cols=85 Identities=16% Similarity=0.080 Sum_probs=65.4
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec-------ccccceeeEEEEEecccccccccccCCC
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK-------GYRDASCVFMEMLVNKDAATSSAYYAPV 374 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK-------GyRdAq~~wi~~~~~~~~~~~~~~~~~~ 374 (414)
.|..+...+.+++.+|+|+++|++...|.|.|+|+.++..++.++ |+.+ ++....-.+++
T Consensus 185 ~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~----~V~~v~~spdg--------- 251 (611)
T 1nr0_A 185 TFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSG----SVFGLTWSPDG--------- 251 (611)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSS----CEEEEEECTTS---------
T ss_pred eeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCC----CEEEEEECCCC---------
Confidence 355667788999999999999999999999999999999999884 6665 34332211111
Q ss_pred CCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 375 KSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 375 k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+ +++-+..+|.|.||++++|+++.+
T Consensus 252 ~------~l~s~s~D~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 252 T------KIASASADKTIKIWNVATLKVEKT 276 (611)
T ss_dssp S------EEEEEETTSEEEEEETTTTEEEEE
T ss_pred C------EEEEEeCCCeEEEEeCCCCceeee
Confidence 1 346678899999999999987754
No 11
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=98.20 E-value=4e-05 Score=76.45 Aligned_cols=87 Identities=16% Similarity=0.243 Sum_probs=65.1
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEecCCcEEe
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVH 113 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~LL~ 113 (414)
.++.||+|.+||.+-+...|.+ |+..++.--++.|- ...|+++.+- ||-..++.|-.+|.|++|+.+|.++.
T Consensus 21 ~~a~spdg~~las~~~d~~v~i-Wd~~~~~~~~l~gh-----~~~V~~l~fs--pdg~~las~~~d~~i~vWd~~~~~~~ 92 (577)
T 2ymu_A 21 GVAFSPDGQTIASASDDKTVKL-WNRNGQLLQTLTGH-----SSSVWGVAFS--PDGQTIASASDDKTVKLWNRNGQLLQ 92 (577)
T ss_dssp EEEECTTSSCEEEEETTSEEEE-ECTTSCEEEEEECC-----SSCEEEEEEC--TTSSEEEEEETTSCEEEEETTSCEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEE-EECCCCEEEEEeCC-----CCCEEEEEEC--CCCCEEEEEeCCCEEEEEECCCCEEE
Confidence 4778999999999877765433 76443211233332 3568887665 47778888999999999999999998
Q ss_pred ecccCccceeEEEEe
Q 015021 114 RQLIHPGRILKLRVR 128 (414)
Q Consensus 114 sQ~lh~~pV~~ik~r 128 (414)
.-.-|..+|..+.+-
T Consensus 93 ~~~~~~~~v~~~~~s 107 (577)
T 2ymu_A 93 TLTGHSSSVRGVAFS 107 (577)
T ss_dssp EECCCSSCEEEEEEC
T ss_pred EEECCCCCEEEEEEC
Confidence 888899999998863
No 12
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.19 E-value=0.0009 Score=64.73 Aligned_cols=81 Identities=9% Similarity=0.060 Sum_probs=57.5
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcc------------eeEeeecccccceeeEEEEEecccccccccccCC
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL------------VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAP 373 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~------------~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~ 373 (414)
+...+.+++.+|+|++++++...|.|.|+|+.++ .....+.|+.+ ++....-.+++
T Consensus 255 h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~-------- 322 (393)
T 1erj_A 255 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD----FVLSVATTQND-------- 322 (393)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSS----CEEEEEECGGG--------
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccC----cEEEEEECCCC--------
Confidence 3456788999999999999999999999999864 44566777776 44333221111
Q ss_pred CCCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 374 VKSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 374 ~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
-+++-+..+|.|.+|++++|+.+.+
T Consensus 323 -------~~l~sgs~D~~v~iwd~~~~~~~~~ 347 (393)
T 1erj_A 323 -------EYILSGSKDRGVLFWDKKSGNPLLM 347 (393)
T ss_dssp -------CEEEEEETTSEEEEEETTTCCEEEE
T ss_pred -------CEEEEEeCCCeEEEEECCCCeEEEE
Confidence 1445677899999999999987743
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.16 E-value=0.00057 Score=64.65 Aligned_cols=84 Identities=13% Similarity=0.085 Sum_probs=64.8
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+.+++.+|++++++++...|.|.++|+.++..++.++|+.+ .+....-.+++ + +
T Consensus 180 ~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~----~v~~v~~~p~~---------~------~ 240 (340)
T 1got_B 180 FTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES----DINAICFFPNG---------N------A 240 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS----CEEEEEECTTS---------S------E
T ss_pred EcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC----CEEEEEEcCCC---------C------E
Confidence 444556688999999999999999999999999999999999999987 33332211111 1 3
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++-+..+|.|.||++++++.+.+
T Consensus 241 l~s~s~d~~v~iwd~~~~~~~~~ 263 (340)
T 1got_B 241 FATGSDDATCRLFDLRADQELMT 263 (340)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEcCCCcEEEEECCCCcEEEE
Confidence 45677899999999999887643
No 14
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.13 E-value=0.0014 Score=60.56 Aligned_cols=92 Identities=12% Similarity=0.133 Sum_probs=60.4
Q ss_pred eeeeccCcceeeeeecce-EEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEec-CCc-
Q 015021 34 NLLCALDMHTIALANRYQ-TVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDL-KGD- 110 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~-~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G~- 110 (414)
.++.+|++++||.+.... +.+-...... ......+.. ....|+++.|.|-.+-..++.|..+|.|++|+. +|.
T Consensus 16 ~~~~s~~~~~l~~~~~dg~i~iw~~~~~~---~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~ 91 (379)
T 3jrp_A 16 DAVLDYYGKRLATCSSDKTIKIFEVEGET---HKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRW 91 (379)
T ss_dssp EEEECSSSSEEEEEETTSCEEEEEEETTE---EEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEE
T ss_pred EEEEcCCCCEEEEEECCCcEEEEecCCCc---ceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCce
Confidence 366789999999886553 3332222111 111122222 246799998876544678999999999999994 565
Q ss_pred -EEeecccCccceeEEEEec
Q 015021 111 -LVHRQLIHPGRILKLRVRG 129 (414)
Q Consensus 111 -LL~sQ~lh~~pV~~ik~r~ 129 (414)
.+....-|..+|..+.+..
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~ 111 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAP 111 (379)
T ss_dssp EEEEEECCCSSCEEEEEECC
T ss_pred eEeeeecCCCcceEEEEeCC
Confidence 5555566889999998643
No 15
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.11 E-value=0.00077 Score=61.88 Aligned_cols=84 Identities=12% Similarity=-0.023 Sum_probs=61.3
Q ss_pred CceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcc------eeEeeecccccce-----eeEEEEEecccccccccccCCC
Q 015021 307 PRKGERLTLSP-SGSLAAITDSLGRILLLDTQAL------VVVRLWKGYRDAS-----CVFMEMLVNKDAATSSAYYAPV 374 (414)
Q Consensus 307 ~R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~------~vvrmwKGyRdAq-----~~wi~~~~~~~~~~~~~~~~~~ 374 (414)
+....+|+.+| ++++++++...|+|.++|+... ..++.+++++.-. .+.+....-.++ +
T Consensus 193 ~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~---------~ 263 (342)
T 1yfq_A 193 KYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPR---------H 263 (342)
T ss_dssp SSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTT---------T
T ss_pred CCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCC---------C
Confidence 34578899999 9999999999999999999887 8888999987621 123322211111 1
Q ss_pred CCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 375 KSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 375 k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
. +++-+-.+|.|.||++++|+++.+
T Consensus 264 --~----~l~~~~~dg~i~vwd~~~~~~~~~ 288 (342)
T 1yfq_A 264 --K----FLYTAGSDGIISCWNLQTRKKIKN 288 (342)
T ss_dssp --C----CEEEEETTSCEEEEETTTTEEEEE
T ss_pred --C----EEEEecCCceEEEEcCccHhHhhh
Confidence 1 234566799999999999998855
No 16
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0013 Score=60.38 Aligned_cols=79 Identities=10% Similarity=-0.075 Sum_probs=60.6
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCc-ceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEc
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQA-LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA 386 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~-~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIya 386 (414)
.....++.+|+++++++++..|.|.++|+.+ +..++..+++.+ .+....-.+++ . +++.+
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~v~~~~~~~~~------------~---~l~~~ 236 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEK----SISDMQFSPDL------------T---YFITS 236 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSS----CEEEEEECTTS------------S---EEEEE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCC----ceeEEEECCCC------------C---EEEEe
Confidence 3788999999999999999999999999999 899999988766 22222111111 1 34566
Q ss_pred CCCCeEEEeeCCCCcceee
Q 015021 387 PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 387 prRg~lEvW~~~~g~~v~~ 405 (414)
-.+|.|.+|++++++.+.+
T Consensus 237 ~~d~~i~v~d~~~~~~~~~ 255 (369)
T 3zwl_B 237 SRDTNSFLVDVSTLQVLKK 255 (369)
T ss_dssp ETTSEEEEEETTTCCEEEE
T ss_pred cCCceEEEEECCCCceeee
Confidence 7899999999999988743
No 17
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.10 E-value=0.0015 Score=63.85 Aligned_cols=70 Identities=7% Similarity=0.057 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEee
Q 015021 317 PSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLA 396 (414)
Q Consensus 317 P~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~ 396 (414)
+.|.++++....|.|.++|+.++..++.++|+.+ |+....-.+++ . +++-+..+|.|.||+
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~----~v~~v~~~~~g-----------~----~l~s~s~D~~i~vwd 366 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDN----WVRGVLFHSGG-----------K----FILSCADDKTLRVWD 366 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEEEEEEECCSS----CEEEEEECSSS-----------S----CEEEEETTTEEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEEECCCC----cEEEEEEcCCC-----------C----EEEEEeCCCeEEEEE
Confidence 3478899999999999999999999999999987 55443222111 1 335677899999999
Q ss_pred CCCCcceee
Q 015021 397 GMADENWTT 405 (414)
Q Consensus 397 ~~~g~~v~~ 405 (414)
+++++++.+
T Consensus 367 ~~~~~~~~~ 375 (410)
T 1vyh_C 367 YKNKRCMKT 375 (410)
T ss_dssp CTTSCCCEE
T ss_pred CCCCceEEE
Confidence 999988754
No 18
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.09 E-value=0.0015 Score=68.00 Aligned_cols=88 Identities=15% Similarity=0.144 Sum_probs=62.1
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcEE
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDLV 112 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~LL 112 (414)
.++.||++..||++..+..|.+ |+-.....+. .+.. ....|+++.|-| |-..+++|..+|.|++|+ .+|..+
T Consensus 18 ~i~~sp~~~~la~~~~~g~v~i-wd~~~~~~~~---~~~~-~~~~v~~~~~s~--~~~~l~~~~~dg~i~vw~~~~~~~~ 90 (814)
T 3mkq_A 18 GIDFHPTEPWVLTTLYSGRVEI-WNYETQVEVR---SIQV-TETPVRAGKFIA--RKNWIIVGSDDFRIRVFNYNTGEKV 90 (814)
T ss_dssp EEEECSSSSEEEEEETTSEEEE-EETTTTEEEE---EEEC-CSSCEEEEEEEG--GGTEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEEEeCCCEEEE-EECCCCceEE---EEec-CCCcEEEEEEeC--CCCEEEEEeCCCeEEEEECCCCcEE
Confidence 4788999999999987643332 4433211111 1111 246689888876 556789999999999999 688888
Q ss_pred eecccCccceeEEEEe
Q 015021 113 HRQLIHPGRILKLRVR 128 (414)
Q Consensus 113 ~sQ~lh~~pV~~ik~r 128 (414)
..-.-|.++|..+.+.
T Consensus 91 ~~~~~~~~~v~~~~~s 106 (814)
T 3mkq_A 91 VDFEAHPDYIRSIAVH 106 (814)
T ss_dssp EEEECCSSCEEEEEEC
T ss_pred EEEecCCCCEEEEEEe
Confidence 7777799999988853
No 19
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.06 E-value=0.00024 Score=67.16 Aligned_cols=86 Identities=13% Similarity=-0.015 Sum_probs=65.2
Q ss_pred cccc-CCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcc
Q 015021 301 TCLK-DHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY 378 (414)
Q Consensus 301 ~~l~-D~~R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~ 378 (414)
..+. .......+++.+| ++++++++...|+|.++|+.++..++.++++.+ ++....-.++ + .
T Consensus 255 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~---------~--~- 318 (416)
T 2pm9_A 255 QTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGN----WCFKTKFAPE---------A--P- 318 (416)
T ss_dssp BCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSS----CCCCEEECTT---------C--T-
T ss_pred EEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCC----ceEEEEECCC---------C--C-
Confidence 3455 5667889999999 889999999999999999999999999998876 2221111110 0 0
Q ss_pred eEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 379 CLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
.+++.+..+|.|.||+++.++...
T Consensus 319 --~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 319 --DLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp --TEEEECCSSSEEEEEESCCCCCSS
T ss_pred --CEEEEEecCCcEEEEEccCCCCCc
Confidence 156778889999999999987654
No 20
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.04 E-value=0.0029 Score=60.96 Aligned_cols=83 Identities=16% Similarity=0.073 Sum_probs=60.0
Q ss_pred cccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 302 CLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
.|..+...+.+|+.+|+| +++|+...+|.|.|+|+.++.+++ .+||.+ +|....=.+.+ +
T Consensus 252 ~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~-~~~H~~----~V~~v~~sp~~-----------~--- 312 (344)
T 4gqb_B 252 SSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFR-SQAHRD----FVRDATWSPLN-----------H--- 312 (344)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEE-ECCCSS----CEEEEEECSSS-----------T---
T ss_pred EEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEE-EcCCCC----CEEEEEEeCCC-----------C---
Confidence 355556678899999998 688888889999999999999887 489988 45433211111 1
Q ss_pred EEEEEcCCCCeEEEeeCCCCcce
Q 015021 381 CLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v 403 (414)
.|+.-+..+|.|.+|++.+.+.-
T Consensus 313 ~llas~s~D~~v~~w~v~~~~~~ 335 (344)
T 4gqb_B 313 SLLTTVGWDHQVVHHVVPTEPLP 335 (344)
T ss_dssp TEEEEEETTSCEEEEECCC----
T ss_pred eEEEEEcCCCeEEEEECCCCCCC
Confidence 25667788999999999886543
No 21
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.03 E-value=0.00074 Score=63.87 Aligned_cols=254 Identities=13% Similarity=0.092 Sum_probs=138.6
Q ss_pred eeeeccCc-ceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEecCCcEE
Q 015021 34 NLLCALDM-HTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLV 112 (414)
Q Consensus 34 ~~~~sp~~-~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~LL 112 (414)
.++.+|++ ++||.+.....|. -|+-........ -.+.. ....|+++.|-|. +-..++.|..+|.|++|+.++..+
T Consensus 78 ~~~~~~~~~~~l~s~~~dg~i~-iwd~~~~~~~~~-~~~~~-h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~ 153 (383)
T 3ei3_B 78 SLEWHPTHPTTVAVGSKGGDII-LWDYDVQNKTSF-IQGMG-PGDAITGMKFNQF-NTNQLFVSSIRGATTLRDFSGSVI 153 (383)
T ss_dssp EEEECSSCTTEEEEEEBTSCEE-EEETTSTTCEEE-ECCCS-TTCBEEEEEEETT-EEEEEEEEETTTEEEEEETTSCEE
T ss_pred EEEECCCCCCEEEEEcCCCeEE-EEeCCCccccee-eecCC-cCCceeEEEeCCC-CCCEEEEEeCCCEEEEEECCCCce
Confidence 46778998 8888877654322 143332111111 11111 2467999988663 557899999999999999877766
Q ss_pred eecccCc---cceeEEEEecccCCCCCCCCCCeEEEEeCCe-EEEEeChhHHHHHHHHHHhccccccCCCCccCCCcccc
Q 015021 113 HRQLIHP---GRILKLRVRGSRRDLTQDTAEEEVCVVMPGV-LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLE 188 (414)
Q Consensus 113 ~sQ~lh~---~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~-iv~IdG~sL~~~Lr~c~~~~~~~~w~~~~~~~~~~~~~ 188 (414)
....-|. .+|..+.+... ...|.....+. |...|- + + + .
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~d~~i~i~d~-~--------------~-------~----~-- 196 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVS---------RQMLATGDSTGRLLLLGL-D--------------G-------H----E-- 196 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETT---------TTEEEEEETTSEEEEEET-T--------------S-------C----E--
T ss_pred EEEeccCCCCCCeEEEEECCC---------CCEEEEECCCCCEEEEEC-C--------------C-------C----E--
Confidence 5554443 67777775321 22343333332 222221 0 0 0 0
Q ss_pred cccCCccceeccc-CCCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhhhhHHHH
Q 015021 189 NSYERLPHQLWNV-SKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATF 267 (414)
Q Consensus 189 ~~~~~L~ykKW~l-~~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~va~av~ 267 (414)
...+ ...+.+.++++.- .+.+.+++.+.+-.+-+|........
T Consensus 197 ---------~~~~~~h~~~v~~~~~~~------------~~~~~l~s~~~d~~i~iwd~~~~~~~--------------- 240 (383)
T 3ei3_B 197 ---------IFKEKLHKAKVTHAEFNP------------RCDWLMATSSVDATVKLWDLRNIKDK--------------- 240 (383)
T ss_dssp ---------EEEEECSSSCEEEEEECS------------SCTTEEEEEETTSEEEEEEGGGCCST---------------
T ss_pred ---------EEEeccCCCcEEEEEECC------------CCCCEEEEEeCCCEEEEEeCCCCCcc---------------
Confidence 0001 1122344444421 11111455555545544433221100
Q ss_pred HHhhhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcceeEeeec
Q 015021 268 STISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 268 S~v~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~~vvrmwK 346 (414)
..++..+ .......+++.+| ++++++++...|+|.++|+.++..++..+
T Consensus 241 -----------------------------~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 290 (383)
T 3ei3_B 241 -----------------------------NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQII 290 (383)
T ss_dssp -----------------------------TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEE
T ss_pred -----------------------------cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccc
Confidence 0011112 3456788999999 99999999999999999999999988888
Q ss_pred ccccceeeEEEEEecccccccccccCCCCCcceEEEEEEc-------CCCCeEEEeeCCCCcceee
Q 015021 347 GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA-------PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 347 GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIya-------prRg~lEvW~~~~g~~v~~ 405 (414)
|+......+..... ..-.+ ...+..+-+. ..+|.|.||++++|+++.+
T Consensus 291 ~~~~~~~~~~~~~~--------~~~~p---~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~ 345 (383)
T 3ei3_B 291 IHPHRQFQHLTPIK--------ATWHP---MYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQ 345 (383)
T ss_dssp ECCBCCCTTSCCCC--------CEECS---SSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEE
T ss_pred cccccccccccceE--------EeccC---CCCceEEEecCCcccccCCCCeEEEEecCCCceeee
Confidence 77653221110000 00000 0111223333 3789999999999998754
No 22
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.03 E-value=0.00063 Score=62.41 Aligned_cols=43 Identities=16% Similarity=0.151 Sum_probs=40.0
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
....+++.+|+++++|+++..|.|.++|+.++..++.++++..
T Consensus 274 ~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 316 (368)
T 3mmy_A 274 YAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ 316 (368)
T ss_dssp CCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS
T ss_pred cceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC
Confidence 4578899999999999999999999999999999999999876
No 23
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.01 E-value=0.0031 Score=60.47 Aligned_cols=78 Identities=15% Similarity=0.069 Sum_probs=55.0
Q ss_pred CCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEE
Q 015021 306 HPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 384 (414)
Q Consensus 306 ~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI 384 (414)
....+.+|+.+|++ +++|+....|.|.|+|+.++.+++.. |+++ +|....=.+ .. . .+++
T Consensus 268 ~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~----~V~~vafsP----------~d-~---~~l~ 328 (357)
T 4g56_B 268 HSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRD----FVTGVAWSP----------LD-H---SKFT 328 (357)
T ss_dssp CSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSS----CEEEEEECS----------SS-T---TEEE
T ss_pred cceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCC----CEEEEEEeC----------CC-C---CEEE
Confidence 34557789999998 68888888999999999999999864 8887 454332111 00 0 1446
Q ss_pred EcCCCCeEEEeeCCCCcc
Q 015021 385 HAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 385 yaprRg~lEvW~~~~g~~ 402 (414)
-+..+|.|.+|++....+
T Consensus 329 s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 329 TVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp EEETTSCEEEEECC----
T ss_pred EEcCCCeEEEEECCCCCc
Confidence 778899999999976433
No 24
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.01 E-value=0.0038 Score=60.60 Aligned_cols=50 Identities=10% Similarity=-0.015 Sum_probs=44.2
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccc
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 351 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdA 351 (414)
.+......+.+++.+|++++++++...|.|.++|+.++..++.++|+.+.
T Consensus 305 ~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 305 ILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 354 (464)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc
Confidence 34555667889999999999999999999999999999999999998873
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.01 E-value=0.0067 Score=54.95 Aligned_cols=77 Identities=8% Similarity=-0.039 Sum_probs=54.7
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
....+++.+|++++++++...|.|.++|+.++...+ .+++.+ .+....-.++ + . +++.+-
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~-~~~~~~----~v~~~~~~~~---------~---~---~l~~~~ 284 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-LHLHES----CVLSLKFAYC---------G---K---WFVSTG 284 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEE-ECCCSS----CEEEEEECTT---------S---S---EEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEE-EcCCcc----ceeEEEECCC---------C---C---EEEEec
Confidence 346789999999999999999999999999988654 345444 2222211111 1 1 334566
Q ss_pred CCCeEEEeeCCCCccee
Q 015021 388 RKGIIEHLAGMADENWT 404 (414)
Q Consensus 388 rRg~lEvW~~~~g~~v~ 404 (414)
.+|.|.+|++++++.+.
T Consensus 285 ~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 285 KDNLLNAWRTPYGASIF 301 (337)
T ss_dssp TTSEEEEEETTTCCEEE
T ss_pred CCCcEEEEECCCCeEEE
Confidence 79999999999998873
No 26
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.00 E-value=0.0014 Score=61.30 Aligned_cols=79 Identities=8% Similarity=-0.164 Sum_probs=58.9
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+.........++.+|++ +++++...|+|.++|+.++..++..+++.. .+....-.+++ . +
T Consensus 285 ~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~------------~---~ 344 (425)
T 1r5m_A 285 FYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDG------------Q---K 344 (425)
T ss_dssp ECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC----CEEEEEECTTS------------S---E
T ss_pred ecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc----cEEEEEEcCCC------------C---E
Confidence 44455667899999999 888888899999999999999999998765 23222111111 1 3
Q ss_pred EEEcCCCCeEEEeeCCCCc
Q 015021 383 AIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~ 401 (414)
++.+-.+|.|.||++++++
T Consensus 345 l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 345 YAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEETTSCEEEEECHHHH
T ss_pred EEEEECCCeEEEEECCCCc
Confidence 4456679999999999987
No 27
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.98 E-value=0.0032 Score=59.48 Aligned_cols=69 Identities=12% Similarity=-0.005 Sum_probs=55.0
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCC
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR 388 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyapr 388 (414)
...+++.+|+|+++++....|.|.++|+.++..++.++|+.+ ++....-.+++ .+++-+..
T Consensus 272 ~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg---------------~~l~s~s~ 332 (340)
T 1got_B 272 GITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDG---------------MAVATGSW 332 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTS---------------SCEEEEET
T ss_pred ceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCC---------------CEEEEEcC
Confidence 367899999999999999999999999999999999999987 44433322211 14466788
Q ss_pred CCeEEEee
Q 015021 389 KGIIEHLA 396 (414)
Q Consensus 389 Rg~lEvW~ 396 (414)
+|.|.||+
T Consensus 333 D~~i~iWd 340 (340)
T 1got_B 333 DSFLKIWN 340 (340)
T ss_dssp TSCEEEEC
T ss_pred CccEEecC
Confidence 99999996
No 28
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.96 E-value=0.0086 Score=55.81 Aligned_cols=226 Identities=9% Similarity=0.035 Sum_probs=118.3
Q ss_pred eeeecc-Ccceeeeeecce-EEEEeecCCCC-Cceeecc-------cCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEE
Q 015021 34 NLLCAL-DMHTIALANRYQ-TVIINWADPEG-LVAKIRP-------ELSPIASEYITAIEWLVFEEMRALAVGTSRGYFL 103 (414)
Q Consensus 34 ~~~~sp-~~~~la~A~~~~-~v~~~w~~~~~-~~v~~~g-------~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vr 103 (414)
.++.+| ++++||.+.... +.+-....... ....... ... .....|+++.|.|- +-..++.|..+|.|+
T Consensus 48 ~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~-~~~~l~s~~~d~~i~ 125 (408)
T 4a11_B 48 TLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPD-VHRYSVETVQWYPH-DTGMFTSSSFDKTLK 125 (408)
T ss_dssp EEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTT-CCSSCEEEEEECTT-CTTCEEEEETTSEEE
T ss_pred EEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccc-cCCCcEEEEEEccC-CCcEEEEEeCCCeEE
Confidence 467889 999988887654 33322222211 1111111 111 13577999988774 445788899999999
Q ss_pred EEecCCcEEeecccCccceeEEEEecccCCCCCCCCCCeEEEEeCCe-EEEEeChhHHHHHHHHHHhccccccCCCCccC
Q 015021 104 VYDLKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGV-LARFDGSEIQKMLQRWFQDSNSNFWDQKPKQR 182 (414)
Q Consensus 104 fyte~G~LL~sQ~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~-iv~IdG~sL~~~Lr~c~~~~~~~~w~~~~~~~ 182 (414)
+|+..........-|+.++..+.+-.... ...-+.+...+. |...|-.+ + +.
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~~~d~~~--------------~-------~~ 178 (408)
T 4a11_B 126 VWDTNTLQTADVFNFEETVYSHHMSPVST------KHCLVAVGTRGPKVQLCDLKS--------------G-------SC 178 (408)
T ss_dssp EEETTTTEEEEEEECSSCEEEEEECSSCS------SCCEEEEEESSSSEEEEESSS--------------S-------CC
T ss_pred EeeCCCCccceeccCCCceeeeEeecCCC------CCcEEEEEcCCCeEEEEeCCC--------------c-------ce
Confidence 99964444444444677887777544322 022233333332 32222100 0 00
Q ss_pred CCcccccccCCccceecccC-CCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhh
Q 015021 183 DSEDLENSYERLPHQLWNVS-KYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSK 261 (414)
Q Consensus 183 ~~~~~~~~~~~L~ykKW~l~-~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~ 261 (414)
. ..+. ..+.+...++.- .+.+.+++.+.+-.+-+|.........
T Consensus 179 --------~-------~~~~~~~~~v~~~~~~~------------~~~~ll~~~~~dg~i~i~d~~~~~~~~-------- 223 (408)
T 4a11_B 179 --------S-------HILQGHRQEILAVSWSP------------RYDYILATASADSRVKLWDVRRASGCL-------- 223 (408)
T ss_dssp --------C-------EEECCCCSCEEEEEECS------------SCTTEEEEEETTSCEEEEETTCSSCCS--------
T ss_pred --------e-------eeecCCCCcEEEEEECC------------CCCcEEEEEcCCCcEEEEECCCCCccc--------
Confidence 0 0011 122344444421 111224566667777677554433210
Q ss_pred hhHHHHHHhhhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCccee
Q 015021 262 VVPATFSTISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV 341 (414)
Q Consensus 262 va~av~S~v~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~v 341 (414)
.. +... .. ... ..+...+......+.+++.+|++++++++...|.|.++|+.++..
T Consensus 224 ---------~~-----~~~~----~~-~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 279 (408)
T 4a11_B 224 ---------IT-----LDQH----NG-KKS-----QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGEN 279 (408)
T ss_dssp ---------EE-----CCTT----TT-CSC-----CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCB
T ss_pred ---------cc-----cccc----cc-ccc-----eeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcc
Confidence 00 0000 00 000 011122445566788999999999999999999999999998876
Q ss_pred Eeeecc
Q 015021 342 VRLWKG 347 (414)
Q Consensus 342 vrmwKG 347 (414)
++...+
T Consensus 280 ~~~~~~ 285 (408)
T 4a11_B 280 TLVNYG 285 (408)
T ss_dssp CCCCCC
T ss_pred ceeccc
Confidence 655544
No 29
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=97.96 E-value=0.01 Score=54.06 Aligned_cols=80 Identities=20% Similarity=0.107 Sum_probs=58.3
Q ss_pred cCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 304 KDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 304 ~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
......+.+|+.+|+|++++++...|.|.++|+.++..++..++.....+... .+ . .. ++
T Consensus 212 ~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~-----~~----------~--~~--~~- 271 (340)
T 4aow_A 212 IGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCF-----SP----------N--RY--WL- 271 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECSSCEEEEEE-----CS----------S--SS--EE-
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCCceEEeeec-----CC----------C--Cc--ee-
Confidence 33445678899999999999999999999999999999999988654222111 11 1 11 22
Q ss_pred EEcCCCCeEEEeeCCCCccee
Q 015021 384 IHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 384 IyaprRg~lEvW~~~~g~~v~ 404 (414)
-+..+|.|.||+++.+..+.
T Consensus 272 -~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 272 -CAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp -EEEETTEEEEEETTTTEEEE
T ss_pred -eccCCCEEEEEECCCCeEEE
Confidence 34468999999999877663
No 30
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.94 E-value=0.0015 Score=59.05 Aligned_cols=85 Identities=22% Similarity=0.346 Sum_probs=57.9
Q ss_pred eeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcEEe
Q 015021 35 LLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDLVH 113 (414)
Q Consensus 35 ~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~LL~ 113 (414)
++=|+++ +||+|....+-+ |+.... ++.-.-.+.. .++.|+++.+-| +-..++.|..+|.|++|+ ++|.++.
T Consensus 31 l~WS~~~-~lAvg~D~tV~i--Wd~~tg-~~~~~~~~~~-~~~~V~~v~~~~--~~~~l~sgs~Dg~v~iw~~~~~~~~~ 103 (318)
T 4ggc_A 31 VDWSSGN-VLAVALDNSVYL--WSASSG-DILQLLQMEQ-PGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLR 103 (318)
T ss_dssp EEECTTS-EEEEEETTEEEE--EETTTC-CEEEEEECCS-TTCCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEE
T ss_pred EEECCCC-EEEEEeCCEEEE--EECCCC-CEEEEEEecC-CCCeEEEEEECC--CCCEEEEEECCCcEEEeecCCceeEE
Confidence 5567776 889998776443 655432 2111111222 356788887765 556889999999999999 6888887
Q ss_pred ecccCccceeEEE
Q 015021 114 RQLIHPGRILKLR 126 (414)
Q Consensus 114 sQ~lh~~pV~~ik 126 (414)
...-|..++..+.
T Consensus 104 ~~~~h~~~~~~~~ 116 (318)
T 4ggc_A 104 NMTSHSARVGSLS 116 (318)
T ss_dssp EEECCSSCEEEEE
T ss_pred EecCccceEEEee
Confidence 7777777777655
No 31
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.93 E-value=0.018 Score=55.78 Aligned_cols=85 Identities=21% Similarity=0.316 Sum_probs=59.1
Q ss_pred eeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcEEe
Q 015021 35 LLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDLVH 113 (414)
Q Consensus 35 ~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~LL~ 113 (414)
++=|++ ++||+|.+..+-+ |+... +++.-.-.+.. .++.||++.|-| |-..+++|..+|.|++|+ ++|.++.
T Consensus 111 l~wS~~-n~lAvgld~tV~l--Wd~~t-g~~~~~~~~~~-~~~~V~sv~fsp--dg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 111 VDWSSG-NVLAVALDNSVYL--WSASS-GDILQLLQMEQ-PGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp EEECTT-SEEEEEETTEEEE--EETTT-CCEEEEEECCS-TTCCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEECCC-CEEEEEeCCEEEE--EECCC-CCEEEEEEecC-CCCcEEEEEECC--CCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 444554 5889998876444 65443 22221112222 357799999865 677899999999999999 6888888
Q ss_pred ecccCccceeEEE
Q 015021 114 RQLIHPGRILKLR 126 (414)
Q Consensus 114 sQ~lh~~pV~~ik 126 (414)
.-.-|..+|..+.
T Consensus 184 ~~~~h~~~v~~~s 196 (420)
T 4gga_A 184 NMTSHSARVGSLS 196 (420)
T ss_dssp EECCCSSCEEEEE
T ss_pred EEeCCCCceEEEe
Confidence 7777888877765
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.91 E-value=0.0062 Score=57.78 Aligned_cols=89 Identities=11% Similarity=0.082 Sum_probs=60.4
Q ss_pred CeeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcE
Q 015021 33 PNLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDL 111 (414)
Q Consensus 33 ~~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~L 111 (414)
+....+|+++.||.+.....|. -|+-... .. ...+.. ....|+++.|-| +-..++.|..+|.|++|+ ++|..
T Consensus 101 ~~~~~~~~~~~l~~~~~dg~i~-iwd~~~~-~~--~~~~~~-h~~~v~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~ 173 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTTEGDIK-VLDSNFN-LQ--REIDQA-HVSEITKLKFFP--SGEALISSSQDMQLKIWSVKDGSN 173 (420)
T ss_dssp EEEEECSSSCEEEEEETTSCEE-EECTTSC-EE--EEETTS-SSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCC
T ss_pred EEEEEecCCCEEEEEECCCCEE-EEeCCCc-ce--eeeccc-ccCccEEEEECC--CCCEEEEEeCCCeEEEEeCCCCcC
Confidence 3445788999988886654332 2443321 11 112222 346799888865 566889999999999999 57777
Q ss_pred EeecccCccceeEEEEe
Q 015021 112 VHRQLIHPGRILKLRVR 128 (414)
Q Consensus 112 L~sQ~lh~~pV~~ik~r 128 (414)
+..-.-|..+|..+.+.
T Consensus 174 ~~~~~~h~~~v~~~~~~ 190 (420)
T 3vl1_A 174 PRTLIGHRATVTDIAII 190 (420)
T ss_dssp CEEEECCSSCEEEEEEE
T ss_pred ceEEcCCCCcEEEEEEc
Confidence 76666788999998864
No 33
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=97.91 E-value=0.0045 Score=59.16 Aligned_cols=78 Identities=10% Similarity=0.072 Sum_probs=59.9
Q ss_pred CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCc-ceeEeeecccccce-----------------eeEEEEEecccccc
Q 015021 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA-LVVVRLWKGYRDAS-----------------CVFMEMLVNKDAAT 366 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~-~~vvrmwKGyRdAq-----------------~~wi~~~~~~~~~~ 366 (414)
.....+.+++.+|+|+++++++. |.|.++|+.+ +..++.++|+.... +.|-. +
T Consensus 283 ~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-----~--- 353 (447)
T 3dw8_B 283 EIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-----S--- 353 (447)
T ss_dssp HHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-----T---
T ss_pred ccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECC-----C---
Confidence 33447889999999999888877 9999999998 99999999886311 23320 0
Q ss_pred cccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 367 SSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 367 ~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
+ . +| +-+-.+|.|.||++++|+.+.
T Consensus 354 -------~---~--~l-~s~s~dg~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 354 -------D---S--VV-MTGSYNNFFRMFDRNTKRDIT 378 (447)
T ss_dssp -------S---S--EE-EEECSTTEEEEEETTTCCEEE
T ss_pred -------C---C--EE-EEeccCCEEEEEEcCCCccee
Confidence 1 1 33 677889999999999998874
No 34
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.88 E-value=0.0067 Score=57.25 Aligned_cols=89 Identities=11% Similarity=0.175 Sum_probs=57.2
Q ss_pred eeecc-CcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEecCCcEEe
Q 015021 35 LLCAL-DMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVH 113 (414)
Q Consensus 35 ~~~sp-~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~LL~ 113 (414)
++.+| +++.|+.+.....|. -|+-.......+.+.- . ....|+++.|-| +-..+++|..+|.|++|+.+|..+.
T Consensus 124 ~~~~~~~~~~l~s~~~d~~i~-iwd~~~~~~~~~~~~~-~-~~~~v~~~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~ 198 (383)
T 3ei3_B 124 MKFNQFNTNQLFVSSIRGATT-LRDFSGSVIQVFAKTD-S-WDYWYCCVDVSV--SRQMLATGDSTGRLLLLGLDGHEIF 198 (383)
T ss_dssp EEEETTEEEEEEEEETTTEEE-EEETTSCEEEEEECCC-C-SSCCEEEEEEET--TTTEEEEEETTSEEEEEETTSCEEE
T ss_pred EEeCCCCCCEEEEEeCCCEEE-EEECCCCceEEEeccC-C-CCCCeEEEEECC--CCCEEEEECCCCCEEEEECCCCEEE
Confidence 44556 556666555443322 2433321111222211 1 236688887764 6668999999999999999999988
Q ss_pred ecccCccceeEEEEe
Q 015021 114 RQLIHPGRILKLRVR 128 (414)
Q Consensus 114 sQ~lh~~pV~~ik~r 128 (414)
.-.-|..+|..+.+-
T Consensus 199 ~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEECSSSCEEEEEEC
T ss_pred EeccCCCcEEEEEEC
Confidence 888899999998863
No 35
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.84 E-value=0.0084 Score=58.30 Aligned_cols=86 Identities=19% Similarity=0.286 Sum_probs=58.8
Q ss_pred CeeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcE
Q 015021 33 PNLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDL 111 (414)
Q Consensus 33 ~~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~L 111 (414)
.+.+++++++.|+.+.....|. -|+.... .. ...+.. ....|+++.+ |-..+++|..+|.|++|+ ++|.+
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~-iwd~~~~-~~--~~~~~~-h~~~v~~l~~----~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIK-IWDKNTL-EC--KRILTG-HTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEE-EEESSSC-CE--EEEECC-CSSCEEEEEC----CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cEEEEEECCCEEEEEeCCCeEE-EEeCCCC-eE--EEEEcC-CCCcEEEEEE----CCCEEEEEcCCCeEEEEECCCCcE
Confidence 5778888888888776654332 2433221 11 111222 2456887766 667999999999999999 68888
Q ss_pred EeecccCccceeEEEE
Q 015021 112 VHRQLIHPGRILKLRV 127 (414)
Q Consensus 112 L~sQ~lh~~pV~~ik~ 127 (414)
+..-.-|.++|..+.+
T Consensus 206 ~~~~~~h~~~v~~l~~ 221 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRF 221 (435)
T ss_dssp EEEECCCCSCEEEEEC
T ss_pred EEEEcCCCCcEEEEEE
Confidence 8777778889988885
No 36
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.82 E-value=0.0056 Score=58.47 Aligned_cols=69 Identities=14% Similarity=0.003 Sum_probs=54.5
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCC
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR 388 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyapr 388 (414)
...+++.+|+|+++++....|.|.++|+.++..+..++|+.+ ++....-.+++ + +++-+..
T Consensus 286 ~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~----~v~~l~~spdg---------~------~l~sgs~ 346 (354)
T 2pbi_B 286 GASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHEN----RVSTLRVSPDG---------T------AFCSGSW 346 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS----CEEEEEECTTS---------S------CEEEEET
T ss_pred ceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCC----cEEEEEECCCC---------C------EEEEEcC
Confidence 356789999999999999999999999999999999999987 55443322211 1 3456778
Q ss_pred CCeEEEee
Q 015021 389 KGIIEHLA 396 (414)
Q Consensus 389 Rg~lEvW~ 396 (414)
+|.|.||+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999995
No 37
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=97.82 E-value=0.0019 Score=59.84 Aligned_cols=80 Identities=6% Similarity=-0.093 Sum_probs=60.0
Q ss_pred CceeeEEEECCCCCEEEEEcCCCcEEEEEc------------------CcceeEeeecccccceeeEEEEEecccccccc
Q 015021 307 PRKGERLTLSPSGSLAAITDSLGRILLLDT------------------QALVVVRLWKGYRDASCVFMEMLVNKDAATSS 368 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~lGRV~L~D~------------------~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~ 368 (414)
...+.+++.+|++++++++...|.|.++|+ ..+..++.++++.+ .+....-.+++
T Consensus 142 ~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~--- 214 (372)
T 1k8k_C 142 RSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCG----WVHGVCFSANG--- 214 (372)
T ss_dssp CSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSS----CEEEEEECSSS---
T ss_pred CCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCC----eEEEEEECCCC---
Confidence 456789999999999999999999999995 47889999987766 33322211111
Q ss_pred cccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 369 AYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 369 ~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
. +++.+-.+|.|.+|++++++.+.+
T Consensus 215 --------~----~l~~~~~d~~i~i~d~~~~~~~~~ 239 (372)
T 1k8k_C 215 --------S----RVAWVSHDSTVCLADADKKMAVAT 239 (372)
T ss_dssp --------S----EEEEEETTTEEEEEEGGGTTEEEE
T ss_pred --------C----EEEEEeCCCEEEEEECCCCceeEE
Confidence 1 445667899999999999987743
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=97.77 E-value=0.0035 Score=58.76 Aligned_cols=228 Identities=10% Similarity=-0.002 Sum_probs=118.7
Q ss_pred eeeeccCcceeeeeecc-eEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEec-CCc-
Q 015021 34 NLLCALDMHTIALANRY-QTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDL-KGD- 110 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~-~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G~- 110 (414)
.++.+|++++||.+... .+.+-..... .......+.. ....|+++.|-| |-..++.|..+|.|++|+. +|.
T Consensus 16 ~~~~s~~g~~l~~~~~d~~i~iw~~~~~---~~~~~~~~~~-h~~~v~~~~~s~--~~~~l~s~s~d~~v~vwd~~~~~~ 89 (377)
T 3dwl_C 16 EHAFNSQRTEFVTTTATNQVELYEQDGN---GWKHARTFSD-HDKIVTCVDWAP--KSNRIVTCSQDRNAYVYEKRPDGT 89 (377)
T ss_dssp CCEECSSSSEEECCCSSSCBCEEEEETT---EEEECCCBCC-CSSCEEEEEECT--TTCCEEEEETTSSEEEC------C
T ss_pred EEEECCCCCEEEEecCCCEEEEEEccCC---ceEEEEEEec-CCceEEEEEEeC--CCCEEEEEeCCCeEEEEEcCCCCc
Confidence 46788999999988444 3333222211 1112223322 246788887764 5567899999999999994 554
Q ss_pred --EEeecccCccceeEEEEecccCCCCCCCCCCeEEEEeCCeEEEEeChhHHHHHHHHHHhccccccCCCCccCCCcccc
Q 015021 111 --LVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGVLARFDGSEIQKMLQRWFQDSNSNFWDQKPKQRDSEDLE 188 (414)
Q Consensus 111 --LL~sQ~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~iv~IdG~sL~~~Lr~c~~~~~~~~w~~~~~~~~~~~~~ 188 (414)
.+..-.-|..+|..+.+... .+.|.....+..+++ |+-...+ .
T Consensus 90 ~~~~~~~~~~~~~v~~~~~~~~---------~~~l~~~~~d~~i~i--------------------wd~~~~~----~-- 134 (377)
T 3dwl_C 90 WKQTLVLLRLNRAATFVRWSPN---------EDKFAVGSGARVISV--------------------CYFEQEN----D-- 134 (377)
T ss_dssp CCCEEECCCCSSCEEEEECCTT---------SSCCEEEESSSCEEE--------------------CCC-----------
T ss_pred eeeeeEecccCCceEEEEECCC---------CCEEEEEecCCeEEE--------------------EEECCcc----c--
Confidence 34444457888888875331 222333333332211 2100000 0
Q ss_pred cccCCccceecccCCCCCceeeEEeCCCCCCchhhhccccceeEEEeCCCceeEEEEeccCCCcchhhhhhhhhhHHHHH
Q 015021 189 NSYERLPHQLWNVSKYGPCADAAITGLMPPPLMEVQSSQRYFCAVTIGEDSVISAFRLSEDRSRSLVGAILSKVVPATFS 268 (414)
Q Consensus 189 ~~~~~L~ykKW~l~~~~~i~Daa~~G~~~p~~~d~~s~~~~~~~i~vG~~P~la~y~~~~~~~~s~~~al~S~va~av~S 268 (414)
. -..+...-...+.+.+.++.- ++. .+++.+.+-.+-+|......-.. .
T Consensus 135 --~--~~~~~~~~~h~~~v~~~~~~~------------~~~-~l~~~~~d~~i~iwd~~~~~~~~-----------~--- 183 (377)
T 3dwl_C 135 --W--WVSKHLKRPLRSTILSLDWHP------------NNV-LLAAGCADRKAYVLSAYVRDVDA-----------K--- 183 (377)
T ss_dssp --C--CCCEEECSSCCSCEEEEEECT------------TSS-EEEEEESSSCEEEEEECCSSCC------------C---
T ss_pred --c--eeeeEeecccCCCeEEEEEcC------------CCC-EEEEEeCCCEEEEEEEEecccCC-----------C---
Confidence 0 000001101233455554421 111 14555666666666443211000 0
Q ss_pred HhhhhhhhhhcCCCCCCCCCCCCcccccCCCCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCccee----Eee
Q 015021 269 TISSLSKMIWRSEQSPKKSEPKPQSFARASPLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVV----VRL 344 (414)
Q Consensus 269 ~v~S~ak~~W~~~~~~~~~e~kp~~~~~a~pl~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~v----vrm 344 (414)
.....|+. ..+. ..++..+ .....+.+++.+|+|+++|++...|.|.++|+.++.. ++.
T Consensus 184 ----~~~~~~~~--------~~~~----~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 246 (377)
T 3dwl_C 184 ----PEASVWGS--------RLPF----NTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALIT 246 (377)
T ss_dssp ----CCSCSSCS--------CCCE----EEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCC
T ss_pred ----cccccccc--------ccch----hhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEe
Confidence 00001100 0010 1122334 6667789999999999999999999999999999988 888
Q ss_pred eccccc
Q 015021 345 WKGYRD 350 (414)
Q Consensus 345 wKGyRd 350 (414)
++|+.+
T Consensus 247 ~~~~~~ 252 (377)
T 3dwl_C 247 VKLSQL 252 (377)
T ss_dssp EECSSS
T ss_pred ecCCCC
Confidence 999877
No 39
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.73 E-value=0.023 Score=51.93 Aligned_cols=81 Identities=10% Similarity=-0.027 Sum_probs=55.6
Q ss_pred CCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCcc-------------------eeEeeecccccceeeEEEEEecccc
Q 015021 305 DHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQAL-------------------VVVRLWKGYRDASCVFMEMLVNKDA 364 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~-laa~tD~lGRV~L~D~~~~-------------------~vvrmwKGyRdAq~~wi~~~~~~~~ 364 (414)
.....+.+++.+|+++ +++++...|.|.++|+.++ ..++.++++.+ .+....-.++
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~v~~~~~s~~ 332 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQ----PISSLDWSPD 332 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSS----CEEEEEECSS
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCC----CeeEEEEcCC
Confidence 4456678899999998 8999999999999999864 45666777765 2222211111
Q ss_pred cccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 365 ATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 365 ~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
+ . +|++-+..+|.|.||++.++++|
T Consensus 333 ---------~--~---~l~~s~~~d~~i~iw~~~~~~~i 357 (357)
T 3i2n_A 333 ---------K--R---GLCVCSSFDQTVRVLIVTKLNKI 357 (357)
T ss_dssp ---------S--T---TEEEEEETTSEEEEEEECC----
T ss_pred ---------C--C---eEEEEecCCCcEEEEECCCcccC
Confidence 1 1 35556888999999999998875
No 40
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=97.67 E-value=0.0003 Score=64.66 Aligned_cols=85 Identities=11% Similarity=-0.028 Sum_probs=68.4
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
.|..+...+.+++.+|+|+++|+++..|.|.++|+.++..++.++|+.+. +....-.++ ++
T Consensus 27 ~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~----v~~~~~~~~---------~~------ 87 (369)
T 3zwl_B 27 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGT----IWSIDVDCF---------TK------ 87 (369)
T ss_dssp EEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSC----EEEEEECTT---------SS------
T ss_pred EEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCc----EEEEEEcCC---------CC------
Confidence 48889999999999999999999999999999999999999999998873 332221111 11
Q ss_pred EEEEcCCCCeEEEeeCCCCcceee
Q 015021 382 LAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+++.+-.+|.|.||++++++.+.+
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEE
Confidence 345667899999999999988744
No 41
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.66 E-value=0.0059 Score=64.99 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=60.2
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEec-CCc--
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDL-KGD-- 110 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G~-- 110 (414)
.++.+|+++.||.+.....|.+ |+-.. ........+.. ....|+++.|.|-.+-..++.|..+|.|++|+. +|.
T Consensus 14 ~l~~s~dg~~latg~~dg~I~v-wd~~~-~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~ 90 (753)
T 3jro_A 14 DAVLDYYGKRLATCSSDKTIKI-FEVEG-ETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS 90 (753)
T ss_dssp EECCCSSSCCEEEEETTTEEEE-EEEET-TEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE
T ss_pred EEEECCCCCeEEEEECCCcEEE-EecCC-CCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc
Confidence 3567789999888866543321 22111 11112222322 246699998877655778999999999999995 554
Q ss_pred EEeecccCccceeEEEEec
Q 015021 111 LVHRQLIHPGRILKLRVRG 129 (414)
Q Consensus 111 LL~sQ~lh~~pV~~ik~r~ 129 (414)
.+..-.-|..+|..+.+..
T Consensus 91 ~~~~~~~h~~~V~~v~~sp 109 (753)
T 3jro_A 91 QIAVHAVHSASVNSVQWAP 109 (753)
T ss_dssp EEEEECCCSSCEEEEEECC
T ss_pred ccccccCCCCCeEEEEECC
Confidence 5555566889999998643
No 42
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.62 E-value=0.026 Score=53.36 Aligned_cols=91 Identities=13% Similarity=0.073 Sum_probs=57.0
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEec-CCc--
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYDL-KGD-- 110 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte-~G~-- 110 (414)
.++.||+|.+||.+-....|-+ |+.... .......+...-...|+++.|-| |-..++.|-.+|.+++|+. .+.
T Consensus 21 ~l~~sp~g~~las~~~D~~i~i-w~~~~~-~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s~s~D~~v~iw~~~~~~~~ 96 (345)
T 3fm0_A 21 FLAWNPAGTLLASCGGDRRIRI-WGTEGD-SWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDATTCIWKKNQDDFE 96 (345)
T ss_dssp EEEECTTSSCEEEEETTSCEEE-EEEETT-EEEEEEEECSSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEECCC-EE
T ss_pred EEEECCCCCEEEEEcCCCeEEE-EEcCCC-cceeeeeeccccCCcEEEEEECC--CCCEEEEEECCCcEEEEEccCCCeE
Confidence 4788999999998876644331 332211 11111222222246688887764 6678999999999999985 343
Q ss_pred EEeecccCccceeEEEEe
Q 015021 111 LVHRQLIHPGRILKLRVR 128 (414)
Q Consensus 111 LL~sQ~lh~~pV~~ik~r 128 (414)
.+..-.-|..+|..+.+.
T Consensus 97 ~~~~~~~h~~~v~~v~~s 114 (345)
T 3fm0_A 97 CVTTLEGHENEVKSVAWA 114 (345)
T ss_dssp EEEEECCCSSCEEEEEEC
T ss_pred EEEEccCCCCCceEEEEe
Confidence 334434578888888753
No 43
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=97.61 E-value=0.016 Score=55.38 Aligned_cols=83 Identities=12% Similarity=0.075 Sum_probs=61.5
Q ss_pred ccCCCceeeEEEECC--CCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 303 LKDHPRKGERLTLSP--SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 303 l~D~~R~~~~i~~sP--~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
+..+......+.++| +|++++++...|.|.++|+.++..++.++|+.+ .+....-.+++ .
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~----~v~~v~~~p~~-----------~--- 253 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES----DVNSVRYYPSG-----------D--- 253 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTS-----------S---
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC----CeEEEEEeCCC-----------C---
Confidence 334444566777777 578999999999999999999999999999887 44433221111 1
Q ss_pred EEEEEcCCCCeEEEeeCCCCccee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
+++-+..+|.|.+|+++.++.+.
T Consensus 254 -~l~s~s~D~~v~lwd~~~~~~~~ 276 (354)
T 2pbi_B 254 -AFASGSDDATCRLYDLRADREVA 276 (354)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEE
T ss_pred -EEEEEeCCCeEEEEECCCCcEEE
Confidence 44667789999999999887654
No 44
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=97.60 E-value=0.013 Score=56.22 Aligned_cols=80 Identities=6% Similarity=-0.003 Sum_probs=52.0
Q ss_pred ceeeEEEECCCCCEEEEE--cCCCcEEEEEcCcceeEee--ecccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 308 RKGERLTLSPSGSLAAIT--DSLGRILLLDTQALVVVRL--WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~t--D~lGRV~L~D~~~~~vvrm--wKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
....+++.+|++++++++ ...|.|.++|+.++...++ .+|+... +.-+... ++ ++ ++
T Consensus 304 ~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~-v~~~~~s---~d---------g~------~l 364 (401)
T 4aez_A 304 SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR-VLYSALS---PD---------GR------IL 364 (401)
T ss_dssp SCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC-CCEEEEC---TT---------SS------EE
T ss_pred CcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC-EEEEEEC---CC---------CC------EE
Confidence 457889999999988885 4899999999999877776 4466542 1111111 10 11 45
Q ss_pred EEcCCCCeEEEeeCCCCcceeec
Q 015021 384 IHAPRKGIIEHLAGMADENWTTS 406 (414)
Q Consensus 384 IyaprRg~lEvW~~~~g~~v~~~ 406 (414)
+.+-.+|.|.+|++.+|+++...
T Consensus 365 ~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 365 STAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEECTTSEEEEEECCC-------
T ss_pred EEEeCCCcEEEEECCCCcccccc
Confidence 66788999999999999988554
No 45
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.59 E-value=0.00042 Score=66.92 Aligned_cols=85 Identities=12% Similarity=0.052 Sum_probs=67.3
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+.+|+.+|+|+++|+....|.|.++|+.++..++.++|+.+ .|....-...+ . .+
T Consensus 123 ~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~----~V~~~~~~~~~-----------~---~~ 184 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA----QVTCVAASPHK-----------D---SV 184 (344)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS----CEEEEEECSSC-----------T---TE
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC----ceEEEEecCCC-----------C---Cc
Confidence 455677789999999999999999999999999999999999999987 44333221111 1 14
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++-+..+|.|.||++++++.+.+
T Consensus 185 l~s~s~D~~v~iwd~~~~~~~~~ 207 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRCPKPASQ 207 (344)
T ss_dssp EEEEETTSCEEEEETTSSSCEEE
T ss_pred eeeeccccccccccccccceeee
Confidence 45678899999999999987754
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=97.58 E-value=0.03 Score=58.19 Aligned_cols=81 Identities=20% Similarity=0.124 Sum_probs=57.5
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+.+|+.+|+|++++++...|.|.|+|+.++..++..++... +....-.+ . .. +|
T Consensus 557 ~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~-----v~~~~~sp----------~--~~--~l 617 (694)
T 3dm0_A 557 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-----IHALCFSP----------N--RY--WL 617 (694)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSC-----EEEEEECS----------S--SS--EE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCc-----EEEEEEcC----------C--Cc--EE
Confidence 455566788999999999999999999999999999998887765322 22211111 1 11 33
Q ss_pred EEEcCCCCeEEEeeCCCCccee
Q 015021 383 AIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~ 404 (414)
+. ..++.|.||++++++.+.
T Consensus 618 ~~--~~~~~i~iwd~~~~~~~~ 637 (694)
T 3dm0_A 618 CA--ATEHGIKIWDLESKSIVE 637 (694)
T ss_dssp EE--EETTEEEEEETTTTEEEE
T ss_pred EE--EcCCCEEEEECCCCCChh
Confidence 32 346679999999988763
No 47
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=97.56 E-value=0.025 Score=51.76 Aligned_cols=79 Identities=10% Similarity=-0.057 Sum_probs=57.1
Q ss_pred CceeeEEEECC---CCCEEEEEcCCCcEEEEEcCcceeEeeec-----ccccceeeEEEEEecccccccccccCCCCCcc
Q 015021 307 PRKGERLTLSP---SGSLAAITDSLGRILLLDTQALVVVRLWK-----GYRDASCVFMEMLVNKDAATSSAYYAPVKSDY 378 (414)
Q Consensus 307 ~R~~~~i~~sP---~~~laa~tD~lGRV~L~D~~~~~vvrmwK-----GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~ 378 (414)
...+.+++.+| ++++++++...|+|.++|+.++..++.++ ++.+ .+....-.+.
T Consensus 209 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~-------------- 270 (357)
T 3i2n_A 209 KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKS----TVWQVRHLPQ-------------- 270 (357)
T ss_dssp SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSS----CEEEEEEETT--------------
T ss_pred CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcC----CEEEEEECCC--------------
Confidence 35678899999 89999999999999999999988777665 6655 2222111110
Q ss_pred eEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 379 CLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
.-.+++-+..+|.|.||+++++...
T Consensus 271 ~~~~l~~~~~dg~i~iwd~~~~~~~ 295 (357)
T 3i2n_A 271 NRELFLTAGGAGGLHLWKYEYPIQR 295 (357)
T ss_dssp EEEEEEEEETTSEEEEEEEECCSCC
T ss_pred CCcEEEEEeCCCcEEEeecCCCccc
Confidence 1136677788999999999976543
No 48
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=97.54 E-value=0.0065 Score=66.92 Aligned_cols=89 Identities=16% Similarity=0.170 Sum_probs=64.1
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCc-eeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cCCcE
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLV-AKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LKGDL 111 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~-v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~G~L 111 (414)
.++.||++++||.+....-|. =|+-..... -++.+ ....|+++.+.|-.+..+++.|..+|.|++|+ ++|..
T Consensus 662 ~~~~s~~~~~l~s~~~d~~v~-vwd~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 662 CCAFSSDDSYIATCSADKKVK-IWDSATGKLVHTYDE-----HSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp EEEECTTSSEEEEEETTSEEE-EEETTTCCEEEEEEC-----CSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred EEEEecCCCEEEEEeCCCeEE-EEECCCCceEEEEcC-----CCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence 367788998888877654322 244332111 12222 25679999888877788999999999999999 68888
Q ss_pred EeecccCccceeEEEEe
Q 015021 112 VHRQLIHPGRILKLRVR 128 (414)
Q Consensus 112 L~sQ~lh~~pV~~ik~r 128 (414)
+..-.-|..+|..+.+-
T Consensus 736 ~~~~~~h~~~v~~~~~s 752 (1249)
T 3sfz_A 736 RNTMFGHTNSVNHCRFS 752 (1249)
T ss_dssp EEEECCCSSCEEEEEEC
T ss_pred hheecCCCCCEEEEEEe
Confidence 87777889999988853
No 49
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.48 E-value=0.0004 Score=65.76 Aligned_cols=85 Identities=15% Similarity=0.083 Sum_probs=66.9
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+......+.+++.+|+++++|++...|.|.++|+.++..++.++|+.+ ++....-.+++ . +
T Consensus 202 ~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~----~v~~~~~sp~~------------~---~ 262 (321)
T 3ow8_A 202 LEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS----WVLNVAFCPDD------------T---H 262 (321)
T ss_dssp ECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTS------------S---E
T ss_pred EcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC----ceEEEEECCCC------------C---E
Confidence 444555678899999999999999999999999999999999999987 55433221111 1 3
Q ss_pred EEEcCCCCeEEEeeCCCCcceeec
Q 015021 383 AIHAPRKGIIEHLAGMADENWTTS 406 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~~ 406 (414)
++.+..+|.|.||++++++++.+-
T Consensus 263 l~s~s~D~~v~iwd~~~~~~~~~~ 286 (321)
T 3ow8_A 263 FVSSSSDKSVKVWDVGTRTCVHTF 286 (321)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCEEEEEE
Confidence 456788999999999999988653
No 50
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=97.48 E-value=0.00045 Score=64.30 Aligned_cols=86 Identities=13% Similarity=0.049 Sum_probs=67.2
Q ss_pred ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
..|..+...+.+|+.+|+|+++|++...|.|.|+|+.++..++.++++... +....-.+++ +
T Consensus 7 ~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~----v~~~~~~~~~---------~----- 68 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETP----VRAGKFIARK---------N----- 68 (304)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGG---------T-----
T ss_pred EeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCc----EEEEEEeCCC---------C-----
Confidence 357777788999999999999999999999999999999999999988762 2221111111 1
Q ss_pred EEEEEcCCCCeEEEeeCCCCcceee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+++-+..+|.|.||++++|+++.+
T Consensus 69 -~l~s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 69 -WIIVGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEEE
T ss_pred -EEEEECCCCEEEEEECCCCcEEEE
Confidence 456678899999999999998743
No 51
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=97.44 E-value=0.0093 Score=55.56 Aligned_cols=87 Identities=14% Similarity=0.048 Sum_probs=56.2
Q ss_pred ccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCcce-eEeeecccccc-----------eeeEEEEEeccccccccc
Q 015021 303 LKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALV-VVRLWKGYRDA-----------SCVFMEMLVNKDAATSSA 369 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~-laa~tD~lGRV~L~D~~~~~-vvrmwKGyRdA-----------q~~wi~~~~~~~~~~~~~ 369 (414)
+......+.+++.+|+++ ++++++..|.|.++|+.++. .++.+++.... .-+.+....-.+
T Consensus 182 ~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~------ 255 (408)
T 4a11_B 182 LQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS------ 255 (408)
T ss_dssp ECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT------
T ss_pred ecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC------
Confidence 444556688999999997 68899999999999998876 55555333211 001221111100
Q ss_pred ccCCCCCcceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 370 YYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 370 ~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
+.. +++-+-.+|.|.+|++++++.+.
T Consensus 256 -------~~~--~l~~~~~dg~i~vwd~~~~~~~~ 281 (408)
T 4a11_B 256 -------DGL--HLLTVGTDNRMRLWNSSNGENTL 281 (408)
T ss_dssp -------TSS--EEEEEETTSCEEEEETTTCCBCC
T ss_pred -------CCC--EEEEecCCCeEEEEECCCCccce
Confidence 001 34456679999999999998764
No 52
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.43 E-value=0.0008 Score=61.93 Aligned_cols=86 Identities=13% Similarity=0.095 Sum_probs=68.0
Q ss_pred ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
..+..+...+.+++.+|+|+++|++...|.|.++|+.++..++..+|+... +....-.++ ++
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~----v~~~~~~~~---------~~----- 78 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLG----ISDVAWSSD---------SN----- 78 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSC----EEEEEECTT---------SS-----
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCc----eEEEEEcCC---------CC-----
Confidence 457788889999999999999999999999999999999999999998873 221111111 11
Q ss_pred EEEEEcCCCCeEEEeeCCCCcceee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+++.+-.+|.|.||++++++++.+
T Consensus 79 -~l~s~~~d~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 79 -LLVSASDDKTLKIWDVSSGKCLKT 102 (312)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEEE
T ss_pred -EEEEECCCCEEEEEECCCCcEEEE
Confidence 456677899999999999987743
No 53
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=97.42 E-value=0.00071 Score=65.31 Aligned_cols=83 Identities=8% Similarity=0.043 Sum_probs=64.4
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEee-ecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL-WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrm-wKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
.+......+.+++.||+|+++|++...|.|.|+|+.++..++- .+||.+ +|....=.+++ +
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~----~V~~v~fSpdg---------~----- 325 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSF----AITEVTISPDS---------T----- 325 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSS----CEEEEEECTTS---------C-----
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccC----CEEEEEECCCC---------C-----
Confidence 3566667789999999999999999999999999999999875 689988 45443322221 1
Q ss_pred EEEEEcCCCCeEEEeeCCCCcce
Q 015021 381 CLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v 403 (414)
+++-+..+|.|.||++...-.-
T Consensus 326 -~laS~S~D~tvrvw~ip~~~~~ 347 (365)
T 4h5i_A 326 -YVASVSAANTIHIIKLPLNYAN 347 (365)
T ss_dssp -EEEEEETTSEEEEEECCTTTTC
T ss_pred -EEEEEeCCCeEEEEEcCCCCcC
Confidence 4567899999999999765433
No 54
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=97.39 E-value=0.00071 Score=64.02 Aligned_cols=84 Identities=18% Similarity=0.107 Sum_probs=63.7
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+........+++.+|+|+++|+....|.|.++|+.++..++.++|+... +....-.++ + -+
T Consensus 160 ~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~----v~~l~~spd---------~------~~ 220 (321)
T 3ow8_A 160 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMP----IRSLTFSPD---------S------QL 220 (321)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----CCEEEECTT---------S------CE
T ss_pred ecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCc----eeEEEEcCC---------C------CE
Confidence 3334456788999999999999999999999999999999999998762 211111111 1 14
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++.+..+|.|.||++++++++.+
T Consensus 221 l~s~s~dg~i~iwd~~~~~~~~~ 243 (321)
T 3ow8_A 221 LVTASDDGYIKIYDVQHANLAGT 243 (321)
T ss_dssp EEEECTTSCEEEEETTTCCEEEE
T ss_pred EEEEcCCCeEEEEECCCcceeEE
Confidence 56788899999999999887644
No 55
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=97.32 E-value=0.00088 Score=65.43 Aligned_cols=86 Identities=13% Similarity=0.203 Sum_probs=69.7
Q ss_pred ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
..+..+...+.+++.+|++++++++...|.|.++|+.++..++.++|+++ |+......+++
T Consensus 186 ~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~----~v~~~~~~~~g--------------- 246 (410)
T 1vyh_C 186 RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE----WVRMVRPNQDG--------------- 246 (410)
T ss_dssp ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTS---------------
T ss_pred EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc----cEEEEEECCCC---------------
Confidence 34566677899999999999999999999999999999999999999998 66655432211
Q ss_pred EEEEEcCCCCeEEEeeCCCCcceee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
-+++-+..+|.|.||++++++++.+
T Consensus 247 ~~l~s~s~D~~v~vwd~~~~~~~~~ 271 (410)
T 1vyh_C 247 TLIASCSNDQTVRVWVVATKECKAE 271 (410)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCceeeE
Confidence 1456677899999999999987643
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.32 E-value=0.025 Score=55.22 Aligned_cols=78 Identities=13% Similarity=-0.057 Sum_probs=43.4
Q ss_pred CCceeeEEEECCCCCEEEEE-cCCCcEEEEEcCcceeEeeec-ccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 306 HPRKGERLTLSPSGSLAAIT-DSLGRILLLDTQALVVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~t-D~lGRV~L~D~~~~~vvrmwK-GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
.......+..+|++++.+++ ...+.|-++|+.+|.++.... |+... +.-+.... ++ + . +|+
T Consensus 354 ~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~-v~s~~~fs--pd---------g--~---~la 416 (435)
T 4e54_B 354 PRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSG-ISSLNEFN--PM---------G--D---TLA 416 (435)
T ss_dssp SSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCC-CCCEEEEC--TT---------S--S---CEE
T ss_pred CCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCc-EEEEEEEC--CC---------C--C---EEE
Confidence 33444556677888665554 445568899999999887654 44432 11111110 10 1 1 343
Q ss_pred EEcCCCCeEEEeeCCCCcc
Q 015021 384 IHAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 384 IyaprRg~lEvW~~~~g~~ 402 (414)
-+ .++.|.||+++.|+.
T Consensus 417 -sg-~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 417 -SA-MGYHILIWSQQEART 433 (435)
T ss_dssp -EE-CSSEEEECCCC----
T ss_pred -EE-cCCcEEEEECCcCee
Confidence 34 488999999999874
No 57
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=97.31 E-value=0.043 Score=50.12 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=39.9
Q ss_pred CceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccc-cc
Q 015021 307 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY-RD 350 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGy-Rd 350 (414)
...+.+++.+|+++++++++..|+|.++|+.++..++.++++ .+
T Consensus 251 ~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~ 295 (342)
T 1yfq_A 251 AYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295 (342)
T ss_dssp CCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS
T ss_pred ceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC
Confidence 346788999999999999999999999999999999999998 55
No 58
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=97.28 E-value=0.0012 Score=61.86 Aligned_cols=86 Identities=16% Similarity=0.154 Sum_probs=66.7
Q ss_pred CCccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcc
Q 015021 299 PLTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY 378 (414)
Q Consensus 299 pl~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~ 378 (414)
|+..|..+...+..++.+|+|++++++...|.|.|+|+.++..++.++|+.+. +....-.+++
T Consensus 57 ~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~----v~~~~~~~~~------------- 119 (319)
T 3frx_A 57 PVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSD----VMSVDIDKKA------------- 119 (319)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTS-------------
T ss_pred cceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCc----EEEEEEcCCC-------------
Confidence 34557778888999999999999999999999999999999999999999873 3222211111
Q ss_pred eEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 379 CLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
-+++-+..+|.|.||+++ ++++.
T Consensus 120 --~~l~s~s~D~~i~vwd~~-~~~~~ 142 (319)
T 3frx_A 120 --SMIISGSRDKTIKVWTIK-GQCLA 142 (319)
T ss_dssp --CEEEEEETTSCEEEEETT-SCEEE
T ss_pred --CEEEEEeCCCeEEEEECC-CCeEE
Confidence 156778899999999996 44443
No 59
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=97.26 E-value=0.049 Score=52.78 Aligned_cols=73 Identities=10% Similarity=0.009 Sum_probs=55.1
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCC
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK 389 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprR 389 (414)
+.++.. ++++++++...|.|.++|+.++..++.++|+...-..+-. . ++ +++-+..+
T Consensus 282 v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~----~-----------~~------~l~~~~~d 338 (445)
T 2ovr_B 282 VYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL----K-----------DN------ILVSGNAD 338 (445)
T ss_dssp EEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE----E-----------TT------EEEEEETT
T ss_pred eEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE----e-----------CC------EEEEEeCC
Confidence 444444 7889999999999999999999999999998874332211 0 01 34556689
Q ss_pred CeEEEeeCCCCcceee
Q 015021 390 GIIEHLAGMADENWTT 405 (414)
Q Consensus 390 g~lEvW~~~~g~~v~~ 405 (414)
|.|.+|++++|+++.+
T Consensus 339 g~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 339 STVKIWDIKTGQCLQT 354 (445)
T ss_dssp SCEEEEETTTCCEEEE
T ss_pred CeEEEEECCCCcEEEE
Confidence 9999999999988754
No 60
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=97.24 E-value=0.0015 Score=63.08 Aligned_cols=80 Identities=13% Similarity=0.058 Sum_probs=62.5
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEE
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 385 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIy 385 (414)
....+.+++.+|+|+++|++...|.|.|+|+.++..++.++|+.+. +....-.+++ . +++.
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~----v~~~~~~p~~-----------~----~l~s 182 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQD----IYSLDYFPSG-----------D----KLVS 182 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTS-----------S----EEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCC----EEEEEEcCCC-----------C----EEEE
Confidence 3445789999999999999999999999999999999999999873 3322211111 1 3467
Q ss_pred cCCCCeEEEeeCCCCccee
Q 015021 386 APRKGIIEHLAGMADENWT 404 (414)
Q Consensus 386 aprRg~lEvW~~~~g~~v~ 404 (414)
+..+|.|.+|++++|+++.
T Consensus 183 ~s~d~~v~iwd~~~~~~~~ 201 (393)
T 1erj_A 183 GSGDRTVRIWDLRTGQCSL 201 (393)
T ss_dssp EETTSEEEEEETTTTEEEE
T ss_pred ecCCCcEEEEECCCCeeEE
Confidence 7889999999999998763
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.22 E-value=0.012 Score=57.49 Aligned_cols=84 Identities=11% Similarity=-0.017 Sum_probs=56.6
Q ss_pred cCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCcceeEee---ecccccceeeEEEEEecccccccccccCCCCCcce
Q 015021 304 KDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALVVVRL---WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC 379 (414)
Q Consensus 304 ~D~~R~~~~i~~sP~~~-laa~tD~lGRV~L~D~~~~~vvrm---wKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~ 379 (414)
.-+...+.+|+.+|++. +++++...|.|.++|+.++..... ..|+.+ .|....-.++ + .
T Consensus 247 ~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~----~v~~~~~spd---------g----~ 309 (435)
T 4e54_B 247 RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRH----PVNAACFSPD---------G----A 309 (435)
T ss_dssp BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSS----CEEECCBCTT---------S----S
T ss_pred ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccc----cccceeECCC---------C----C
Confidence 33455678999999985 788888899999999988764433 245554 3322211111 1 1
Q ss_pred EEEEEEcCCCCeEEEeeCCCCcceeec
Q 015021 380 LCLAIHAPRKGIIEHLAGMADENWTTS 406 (414)
Q Consensus 380 l~LvIyaprRg~lEvW~~~~g~~v~~~ 406 (414)
+++-+-.+|.|.||++++|++..+.
T Consensus 310 --~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 310 --RLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp --EEEEEESSSCEEEEESSSSSSEEEE
T ss_pred --eeEEEcCCCEEEEEECCCCccceEE
Confidence 3355778999999999999877543
No 62
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.19 E-value=0.0018 Score=62.18 Aligned_cols=84 Identities=12% Similarity=0.077 Sum_probs=64.6
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+.+|+.+|+|++++++...|.|.++|+.++..++.++|+.+. +....-...+ + .+
T Consensus 135 ~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~----v~~v~~s~~~-----------~---~~ 196 (357)
T 4g56_B 135 KYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSE----VNCVAACPGK-----------D---TI 196 (357)
T ss_dssp ECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC----EEEEEECTTC-----------S---SC
T ss_pred cCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCC----EEEEEEccCC-----------C---ce
Confidence 4455677889999999999999999999999999999999999998873 3322211110 1 13
Q ss_pred EEEcCCCCeEEEeeCCCCccee
Q 015021 383 AIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~ 404 (414)
++.+..+|.|.||++++++.+.
T Consensus 197 ~~s~~~dg~v~~wd~~~~~~~~ 218 (357)
T 4g56_B 197 FLSCGEDGRILLWDTRKPKPAT 218 (357)
T ss_dssp EEEEETTSCEEECCTTSSSCBC
T ss_pred eeeeccCCceEEEECCCCceee
Confidence 4566789999999999988764
No 63
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.18 E-value=0.0012 Score=62.66 Aligned_cols=84 Identities=15% Similarity=0.091 Sum_probs=66.2
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+.+++.+|++++++++...|.|.++|+.++..++.++|+.+ .+....-.+++ + +
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~---------~------~ 195 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA----TVTDIAIIDRG---------R------N 195 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS----CEEEEEEETTT---------T------E
T ss_pred cccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC----cEEEEEEcCCC---------C------E
Confidence 456667889999999999999999999999999999999999999887 33322211111 1 3
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++.+-.+|.|.+|++++|+.+.+
T Consensus 196 l~s~~~d~~v~iwd~~~~~~~~~ 218 (420)
T 3vl1_A 196 VLSASLDGTIRLWECGTGTTIHT 218 (420)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEcCCCcEEEeECCCCceeEE
Confidence 45778899999999999988754
No 64
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.14 E-value=0.0022 Score=61.36 Aligned_cols=83 Identities=19% Similarity=0.197 Sum_probs=63.7
Q ss_pred CccccCCCceeeEEEECCCCCEEEEEcCCCc-EEEEEcCcceeEeeec-c-cccceeeEEEEEecccccccccccCCCCC
Q 015021 300 LTCLKDHPRKGERLTLSPSGSLAAITDSLGR-ILLLDTQALVVVRLWK-G-YRDASCVFMEMLVNKDAATSSAYYAPVKS 376 (414)
Q Consensus 300 l~~l~D~~R~~~~i~~sP~~~laa~tD~lGR-V~L~D~~~~~vvrmwK-G-yRdAq~~wi~~~~~~~~~~~~~~~~~~k~ 376 (414)
+..+..+...+.+|+.+|+|+++|++...|. |.|+|+.++..++.++ | +.+ .+.-+.. .+++ +
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~-~v~~~~~---s~~~---------~- 253 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA-DVVDMKW---STDG---------S- 253 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS-CEEEEEE---CTTS---------C-
T ss_pred cEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC-cEEEEEE---CCCC---------C-
Confidence 4557778888999999999999999999998 9999999999999998 7 654 2222222 1111 1
Q ss_pred cceEEEEEEcCCCCeEEEeeCCCCc
Q 015021 377 DYCLCLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 377 ~~~l~LvIyaprRg~lEvW~~~~g~ 401 (414)
+++-+..+|.|.||+++++.
T Consensus 254 -----~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 254 -----KLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp -----EEEEEETTCEEEEEESSCCS
T ss_pred -----EEEEEECCCEEEEEEccCCC
Confidence 34566779999999998764
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=97.10 E-value=0.003 Score=57.30 Aligned_cols=84 Identities=14% Similarity=0.106 Sum_probs=62.9
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+.........++.+|+++++++++..|.|.++|+.++..++.++++.+ .+....-.+++ . +
T Consensus 137 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~----~i~~~~~~~~~-----------~----~ 197 (337)
T 1gxr_A 137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD----GASCIDISNDG-----------T----K 197 (337)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTS-----------S----E
T ss_pred cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC----ceEEEEECCCC-----------C----E
Confidence 344455678899999999999999999999999999999999998776 23322211111 1 3
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++.+-.+|.|.+|++++++.+.+
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~~ 220 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQQ 220 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEEE
T ss_pred EEEEecCCcEEEEECCCCceEee
Confidence 34566899999999999987743
No 66
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.97 E-value=0.0046 Score=55.54 Aligned_cols=83 Identities=10% Similarity=0.012 Sum_probs=62.2
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcc----eeEeeecccccceeeEEEEEecccccccccccCCCCCc
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL----VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~----~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
.+..+...+.+|+.+|+++++|++...|.|.++|+.++ ..++.++|+.+. |....-.+ .. +
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~----------~~-d 70 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSS----IVAIDWAS----------PE-Y 70 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSC----EEEEEECC----------GG-G
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCc----EEEEEEcC----------CC-C
Confidence 36677888999999999999999999999999999987 688888998873 32221111 00 0
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCCc
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~ 401 (414)
. -+++-+-.+|.|.||+++.++
T Consensus 71 ~--~~l~s~~~dg~v~vwd~~~~~ 92 (351)
T 3f3f_A 71 G--RIIASASYDKTVKLWEEDPDQ 92 (351)
T ss_dssp C--SEEEEEETTSCEEEEEECTTS
T ss_pred C--CEEEEEcCCCeEEEEecCCCc
Confidence 0 144566779999999999874
No 67
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.92 E-value=0.0029 Score=58.41 Aligned_cols=84 Identities=11% Similarity=-0.005 Sum_probs=63.8
Q ss_pred ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcC--cceeEeeecccccceeeEEEEEecccccccccccCCCCCcc
Q 015021 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQ--ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY 378 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~--~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~ 378 (414)
..+..+...+.+|+.+|+|+++|++...|.|.++|+. ++..++.++|+.+. +....-..+ . +.
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~----v~~~~~~~~----------~-~~ 69 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGP----VWRVDWAHP----------K-FG 69 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSC----EEEEEECCG----------G-GC
T ss_pred EEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCc----EEEEEeCCC----------C-CC
Confidence 4467778889999999999999999999999999998 88899999998773 322211110 0 00
Q ss_pred eEEEEEEcCCCCeEEEeeCCCCc
Q 015021 379 CLCLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~ 401 (414)
-+++-+-.+|.|.||++++++
T Consensus 70 --~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 70 --TILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp --SEEEEEETTSCEEEEEEETTE
T ss_pred --CEEEEeccCCEEEEEEcCCCc
Confidence 144566779999999999986
No 68
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.92 E-value=0.0027 Score=59.70 Aligned_cols=81 Identities=22% Similarity=0.149 Sum_probs=61.4
Q ss_pred CceeeEEEECCCCCEEEEEcCC---CcEEEEEcCcceeEeeecc-------------cccceeeEEEEEecccccccccc
Q 015021 307 PRKGERLTLSPSGSLAAITDSL---GRILLLDTQALVVVRLWKG-------------YRDASCVFMEMLVNKDAATSSAY 370 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~l---GRV~L~D~~~~~vvrmwKG-------------yRdAq~~wi~~~~~~~~~~~~~~ 370 (414)
.....+|+.+|++++++++... |.|.++|+.++..++.+++ +.+ .+....-.++
T Consensus 233 ~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~v~~~~~~~~------ 302 (397)
T 1sq9_A 233 SNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSS----WVMSLSFNDS------ 302 (397)
T ss_dssp CCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSS----CEEEEEECSS------
T ss_pred CCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCC----cEEEEEECCC------
Confidence 5668899999999999998777 9999999999999999998 655 3332221111
Q ss_pred cCCCCCcceEEEEEEcCCCCeEEEeeCCCCcceeec
Q 015021 371 YAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWTTS 406 (414)
Q Consensus 371 ~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~~ 406 (414)
+ . +++-+..+|.|.||++++++++.+-
T Consensus 303 ---~---~---~l~~~~~dg~i~iwd~~~~~~~~~~ 329 (397)
T 1sq9_A 303 ---G---E---TLCSAGWDGKLRFWDVKTKERITTL 329 (397)
T ss_dssp ---S---S---EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ---C---C---EEEEEeCCCeEEEEEcCCCceeEEE
Confidence 1 1 3445668999999999999888553
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.90 E-value=0.0041 Score=59.58 Aligned_cols=88 Identities=13% Similarity=0.077 Sum_probs=66.9
Q ss_pred CCccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCcceeEeee--cccccceeeEEEEEecccccccccccCCCC
Q 015021 299 PLTCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLW--KGYRDASCVFMEMLVNKDAATSSAYYAPVK 375 (414)
Q Consensus 299 pl~~l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~vvrmw--KGyRdAq~~wi~~~~~~~~~~~~~~~~~~k 375 (414)
++..+..+...+..|+.+|++ +++++++..|.|.++|+.++..++.+ +++.+ .+....-.+++
T Consensus 123 ~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~----~v~~~~~~~~~---------- 188 (402)
T 2aq5_A 123 PVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD----TIYSVDWSRDG---------- 188 (402)
T ss_dssp CSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS----CEEEEEECTTS----------
T ss_pred ceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC----ceEEEEECCCC----------
Confidence 445577778889999999998 69999999999999999999999999 77776 33322211111
Q ss_pred CcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 376 SDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 376 ~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
. +++.+-.+|.|.||++++|+.+.+
T Consensus 189 -~----~l~~~~~d~~i~iwd~~~~~~~~~ 213 (402)
T 2aq5_A 189 -A----LICTSCRDKRVRVIEPRKGTVVAE 213 (402)
T ss_dssp -S----CEEEEETTSEEEEEETTTTEEEEE
T ss_pred -C----EEEEEecCCcEEEEeCCCCceeee
Confidence 1 334566899999999999988754
No 70
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.90 E-value=0.0044 Score=59.64 Aligned_cols=85 Identities=12% Similarity=0.139 Sum_probs=63.3
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec-ccccceeeEEEEEecccccccccccCCCCCcceEEEEE
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 384 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK-GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI 384 (414)
....+.+++.+|++++++++...|.|.++|+.++..++.|+ ++.. .+.-+.....-. . +. .+++
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~v~~~~~~~~~s-----------~-~~--~~l~ 277 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA-PITHVEVCQFYG-----------K-NS--VIVV 277 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE-EEEEEEECTTTC-----------T-TE--EEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC-ceEEEEeccccC-----------C-Cc--cEEE
Confidence 44678899999999999999999999999999999999997 6554 222222110000 0 11 3566
Q ss_pred EcCCCCeEEEeeCCCCcceee
Q 015021 385 HAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 385 yaprRg~lEvW~~~~g~~v~~ 405 (414)
-+-.+|.|.||++++|+++.+
T Consensus 278 s~~~dg~i~iwd~~~~~~~~~ 298 (437)
T 3gre_A 278 GGSSKTFLTIWNFVKGHCQYA 298 (437)
T ss_dssp EESTTEEEEEEETTTTEEEEE
T ss_pred EEcCCCcEEEEEcCCCcEEEE
Confidence 788899999999999997754
No 71
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=96.89 E-value=0.0063 Score=55.71 Aligned_cols=83 Identities=7% Similarity=0.059 Sum_probs=60.5
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccc--eeeEEEEEecccccccccccCCCCCcceE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA--SCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdA--q~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
+..+...+.+++.+|+++++++++..|.|.++|+.++..+++ .++.+. .+.|.. . + +.
T Consensus 82 ~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~~~~v~~~~~~~---~-~-------------~~-- 141 (368)
T 3mmy_A 82 QQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQI-AQHDAPVKTIHWIK---A-P-------------NY-- 141 (368)
T ss_dssp EEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEEEE---C-S-------------SC--
T ss_pred eccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceee-ccccCceEEEEEEe---C-C-------------CC--
Confidence 445566788999999999999999999999999999998885 445442 122221 1 1 01
Q ss_pred EEEEEcCCCCeEEEeeCCCCcceee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
-+++.+-.+|.|.+|++++++.+.+
T Consensus 142 ~~l~~~~~dg~i~vwd~~~~~~~~~ 166 (368)
T 3mmy_A 142 SCVMTGSWDKTLKFWDTRSSNPMMV 166 (368)
T ss_dssp EEEEEEETTSEEEEECSSCSSCSEE
T ss_pred CEEEEccCCCcEEEEECCCCcEEEE
Confidence 2456777889999999999887643
No 72
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.84 E-value=0.0059 Score=57.42 Aligned_cols=79 Identities=9% Similarity=-0.069 Sum_probs=59.9
Q ss_pred CceeeEEEECC--CCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEE
Q 015021 307 PRKGERLTLSP--SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 384 (414)
Q Consensus 307 ~R~~~~i~~sP--~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI 384 (414)
...+..++.+| ++++++++...|.|.++|+.++..+++.++..+..+.-+... ++ + -+++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~---pd---------g------~~la 186 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLH---KD---------S------LLLA 186 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEEC---TT---------S------CEEE
T ss_pred CCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEEC---CC---------C------CEEE
Confidence 35688999999 999999999999999999999999888866655443323221 11 1 1445
Q ss_pred EcCCCCeEEEeeCCCCcce
Q 015021 385 HAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 385 yaprRg~lEvW~~~~g~~v 403 (414)
-+-.+|.|.||++++++++
T Consensus 187 sg~~dg~i~iwd~~~~~~~ 205 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPDQA 205 (343)
T ss_dssp EECTTSCEEEEESSCTTSC
T ss_pred EEcCCCEEEEEECCCCCCC
Confidence 5678999999999999987
No 73
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.81 E-value=0.0068 Score=60.17 Aligned_cols=93 Identities=17% Similarity=0.040 Sum_probs=63.9
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecc-cccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG-YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKG-yRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
+......+.+++.+|+|+++|+++..|.|.++|+.++..++..+| +.+ .+.-+....... . ... ..+ +. -
T Consensus 484 ~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~-~v~~~~~sp~~~-~---~~~-~~~-~~--~ 554 (615)
T 1pgu_A 484 KTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTS-KINAISWKPAEK-G---ANE-EEI-EE--D 554 (615)
T ss_dssp SSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSS-CEEEEEECCCC-----------CC-SC--C
T ss_pred cCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCC-ceeEEEEcCccc-c---ccc-ccc-CC--C
Confidence 455667789999999999999999999999999999999999988 544 333332211000 0 000 000 01 1
Q ss_pred EEEEcCCCCeEEEeeCCCC-ccee
Q 015021 382 LAIHAPRKGIIEHLAGMAD-ENWT 404 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g-~~v~ 404 (414)
+++-+-.+|.|.||+++++ +++.
T Consensus 555 ~l~~~~~dg~i~iw~~~~~~~~~~ 578 (615)
T 1pgu_A 555 LVATGSLDTNIFIYSVKRPMKIIK 578 (615)
T ss_dssp EEEEEETTSCEEEEESSCTTCCEE
T ss_pred EEEEEcCCCcEEEEECCCCceech
Confidence 4556778999999999998 5554
No 74
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.79 E-value=0.0042 Score=56.99 Aligned_cols=83 Identities=12% Similarity=0.043 Sum_probs=62.9
Q ss_pred cccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcceeEeee---cccccceeeEEEEEecccccccccccCCCCCc
Q 015021 302 CLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLW---KGYRDASCVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~~vvrmw---KGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
.+......+..|+.+| ++++++++...|.|.++|+.++..++.+ +++.+ .+....-.+++ .
T Consensus 110 ~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~----~v~~~~~~~~~-----------~ 174 (366)
T 3k26_A 110 HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD----EVLSADYDLLG-----------E 174 (366)
T ss_dssp EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS----CEEEEEECTTS-----------S
T ss_pred eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC----ceeEEEECCCC-----------C
Confidence 4556677889999999 8899999999999999999999999999 56655 33322211111 1
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
+++.+-.+|.|.+|++++++.+
T Consensus 175 ----~l~~~~~dg~i~i~d~~~~~~~ 196 (366)
T 3k26_A 175 ----KIMSCGMDHSLKLWRINSKRMM 196 (366)
T ss_dssp ----EEEEEETTSCEEEEESCSHHHH
T ss_pred ----EEEEecCCCCEEEEECCCCccc
Confidence 3456667999999999988765
No 75
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.76 E-value=0.0087 Score=57.28 Aligned_cols=86 Identities=10% Similarity=0.026 Sum_probs=65.0
Q ss_pred cccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcc-------eeEeeecccccceeeEEEEEecccccccccccCC
Q 015021 302 CLKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQAL-------VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAP 373 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~-------~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~ 373 (414)
.+..+...+..++.+| +++++|++...|.|.++|+.++ ..++.++|+.+ .+....-.+.+
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~----~v~~~~~~p~~-------- 143 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTK----RVGIVAWHPTA-------- 143 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSS----CEEEEEECSSB--------
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCC----eEEEEEECcCC--------
Confidence 3556677899999999 8899999999999999999998 67888888876 23222211110
Q ss_pred CCCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 374 VKSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 374 ~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+ .+++-+..+|.|.||++++|+.+.+
T Consensus 144 -~-----~~l~s~~~dg~i~iwd~~~~~~~~~ 169 (402)
T 2aq5_A 144 -Q-----NVLLSAGCDNVILVWDVGTGAAVLT 169 (402)
T ss_dssp -T-----TEEEEEETTSCEEEEETTTTEEEEE
T ss_pred -C-----CEEEEEcCCCEEEEEECCCCCccEE
Confidence 0 1456677899999999999988744
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.75 E-value=0.0047 Score=64.26 Aligned_cols=86 Identities=12% Similarity=0.045 Sum_probs=65.9
Q ss_pred ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
..|..+...+.+|+.+|+|+++|++...|.|.++|+.++..++..+|+... +....-.+++ +
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~----v~~~~~s~~~---------~----- 68 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETP----VRAGKFIARK---------N----- 68 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEEEGGG---------T-----
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCc----EEEEEEeCCC---------C-----
Confidence 346667778999999999999999999999999999999999999988763 2222111111 1
Q ss_pred EEEEEcCCCCeEEEeeCCCCcceee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+++.+..+|.|.||++++|+++.+
T Consensus 69 -~l~~~~~dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 69 -WIIVGSDDFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEEE
T ss_pred -EEEEEeCCCeEEEEECCCCcEEEE
Confidence 334456699999999999998754
No 77
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.72 E-value=0.22 Score=52.91 Aligned_cols=68 Identities=4% Similarity=-0.073 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCCcEEEEEcCcc----eeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEE
Q 015021 318 SGSLAAITDSLGRILLLDTQAL----VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393 (414)
Q Consensus 318 ~~~laa~tD~lGRV~L~D~~~~----~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lE 393 (414)
++++++++...|.|.++|+.++ .+++..+|+.+ .+....-.+. .... -+++.+..+|.|.
T Consensus 169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~----~V~~l~~sp~----------~~~~--~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD----WVRDVAWSPT----------VLLR--SYLASVSQDRTCI 232 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS----CEEEEEECCC----------CSSS--EEEEEEESSSCEE
T ss_pred CCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCC----cEEEEEeccC----------CCCC--CEEEEEecCCEEE
Confidence 6889999999999999999887 77788888876 2322221111 0001 2556778899999
Q ss_pred EeeCCCCc
Q 015021 394 HLAGMADE 401 (414)
Q Consensus 394 vW~~~~g~ 401 (414)
||+++.++
T Consensus 233 iwd~~~~~ 240 (753)
T 3jro_A 233 IWTQDNEQ 240 (753)
T ss_dssp EEEESSSS
T ss_pred EecCCCCC
Confidence 99999874
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.69 E-value=0.0078 Score=56.48 Aligned_cols=41 Identities=15% Similarity=0.142 Sum_probs=38.2
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK 346 (414)
....+.+++.+|++++++++...|+|.++|+.++..++.++
T Consensus 290 ~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 290 HSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp BSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred cCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 45678899999999999999999999999999999999999
No 79
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.62 E-value=0.0062 Score=57.27 Aligned_cols=77 Identities=9% Similarity=0.000 Sum_probs=57.4
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeE-eeecc-cccceeeEEEEEecccccccccccCCCCCcceEEEEEEc
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVV-RLWKG-YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA 386 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vv-rmwKG-yRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIya 386 (414)
...+++.+|+|+++|+....|.|.++|+.++..+ ..+++ +.+ .+....-.+++ . +|+.-.
T Consensus 172 ~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~----~v~~l~fs~~g------------~--~l~s~~ 233 (343)
T 3lrv_A 172 EYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA----KIKEVKFADNG------------Y--WMVVEC 233 (343)
T ss_dssp CCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS----CEEEEEECTTS------------S--EEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC----CEEEEEEeCCC------------C--EEEEEe
Confidence 3678999999999999999999999999999988 88888 665 34333211111 1 344444
Q ss_pred CCCCeEEEeeCCCCcceee
Q 015021 387 PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 387 prRg~lEvW~~~~g~~v~~ 405 (414)
++.|.||++++++.+.+
T Consensus 234 --~~~v~iwd~~~~~~~~~ 250 (343)
T 3lrv_A 234 --DQTVVCFDLRKDVGTLA 250 (343)
T ss_dssp --SSBEEEEETTSSTTCBS
T ss_pred --CCeEEEEEcCCCCccee
Confidence 56999999999987643
No 80
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.60 E-value=0.0086 Score=56.08 Aligned_cols=86 Identities=15% Similarity=0.102 Sum_probs=66.4
Q ss_pred ccccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCc-----ceeEeeecccccceeeEEEEEecccccccccccCCC
Q 015021 301 TCLKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQA-----LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV 374 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~-----~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~ 374 (414)
..|..+...+.+|+.+|++ ++++++..+|.|.++|+.. +..++.++|+.+ .+....-.+++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~----~v~~~~~s~dg--------- 77 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH----IVQDCTLTADG--------- 77 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS----CEEEEEECTTS---------
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcc----cEEEEEECCCC---------
Confidence 4577888899999999976 8999999999999999864 567889999988 44332221111
Q ss_pred CCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 375 KSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 375 k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+ +++-+..+|.|.||++++|+++.+
T Consensus 78 ~------~l~s~s~D~~v~~wd~~~~~~~~~ 102 (319)
T 3frx_A 78 A------YALSASWDKTLRLWDVATGETYQR 102 (319)
T ss_dssp S------EEEEEETTSEEEEEETTTTEEEEE
T ss_pred C------EEEEEeCCCEEEEEECCCCCeeEE
Confidence 1 456778899999999999988743
No 81
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.58 E-value=0.008 Score=66.20 Aligned_cols=84 Identities=8% Similarity=-0.030 Sum_probs=66.3
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+..++.+|+|+++|++...|.|.++|+.++..++.++|+.+ ++....-.+++ + +
T Consensus 611 ~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~----~v~~~~~s~~~---------~------~ 671 (1249)
T 3sfz_A 611 VRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHED----EVLCCAFSSDD---------S------Y 671 (1249)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS----CEEEEEECTTS---------S------E
T ss_pred EecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCC----CEEEEEEecCC---------C------E
Confidence 556677889999999999999999999999999999999999999887 44433222211 1 3
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++-+-.+|.|.||++.+|+.+.+
T Consensus 672 l~s~~~d~~v~vwd~~~~~~~~~ 694 (1249)
T 3sfz_A 672 IATCSADKKVKIWDSATGKLVHT 694 (1249)
T ss_dssp EEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEeCCCeEEEEECCCCceEEE
Confidence 34456799999999999988754
No 82
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.0056 Score=59.95 Aligned_cols=84 Identities=14% Similarity=0.061 Sum_probs=63.8
Q ss_pred cccCCCceeeEEEECCC---CCEEEEEcCCCcEEEEEcCcceeEee-ecccccceeeEEEEEecccccccccccCCCCCc
Q 015021 302 CLKDHPRKGERLTLSPS---GSLAAITDSLGRILLLDTQALVVVRL-WKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~---~~laa~tD~lGRV~L~D~~~~~vvrm-wKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
.+......+.+|+.+|+ ++++++++..|.|.++|+.++..++. ..|+.+ ++....-.+ ++
T Consensus 190 ~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~sd----------~~-- 253 (450)
T 2vdu_B 190 PILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH----FVSSICCGK----------DY-- 253 (450)
T ss_dssp CSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS----CEEEEEECS----------TT--
T ss_pred eeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC----ceEEEEECC----------CC--
Confidence 34556677889999999 99999999999999999999988877 557775 443322111 11
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+++.+..+|.|.||++++|+++.+
T Consensus 254 ----~l~s~~~d~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 254 ----LLLSAGGDDKIFAWDWKTGKNLST 277 (450)
T ss_dssp ----EEEEEESSSEEEEEETTTCCEEEE
T ss_pred ----EEEEEeCCCeEEEEECCCCcEeee
Confidence 445677899999999999998744
No 83
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.55 E-value=0.0091 Score=56.25 Aligned_cols=79 Identities=14% Similarity=0.056 Sum_probs=61.4
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
.+..+...+..++.+|++++++++...|.|.|+|+.++..++.++|+.+ .+....-.+++ .
T Consensus 71 ~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~----~v~~v~~sp~~-----------~---- 131 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS----EVYSVAFSPDN-----------R---- 131 (343)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS----CEEEEEECSST-----------T----
T ss_pred hhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC----cEEEEEECCCC-----------C----
Confidence 4566677789999999999999999999999999999999999999987 33322211111 1
Q ss_pred EEEEcCCCCeEEEeeCCC
Q 015021 382 LAIHAPRKGIIEHLAGMA 399 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~ 399 (414)
+++-+..+|.|.+|++..
T Consensus 132 ~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 132 QILSAGAEREIKLWNILG 149 (343)
T ss_dssp EEEEEETTSCEEEEESSS
T ss_pred EEEEEcCCCEEEEEeccC
Confidence 345677899999999973
No 84
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.52 E-value=0.012 Score=56.96 Aligned_cols=80 Identities=15% Similarity=0.094 Sum_probs=60.0
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+..+...+.+|+.+|+|+++|+....|.|.|+|+.++..++.++|+...-..+-. . . .+
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~----~-----------~------~~ 201 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW----N-----------S------YI 201 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE----E-----------T------TE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEee----C-----------C------CE
Confidence 4455667899999999999999999999999999999999999999874333211 0 0 13
Q ss_pred EEEcCCCCeEEEeeCCCCcce
Q 015021 383 AIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v 403 (414)
+.-+.+++.+.+|+.+.....
T Consensus 202 l~sgs~d~~i~~~d~~~~~~~ 222 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRVAEHH 222 (420)
T ss_dssp EEEEETTSEEEEEETTSSSCE
T ss_pred EEEEeCCCceeEeeeccccee
Confidence 445666777777777764443
No 85
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.48 E-value=0.0097 Score=53.41 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=59.9
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEE
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 385 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIy 385 (414)
.......++.+|+++ ++++...|.|.++|+.++..++.++++.+ .+....-.++ . .++.
T Consensus 183 ~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~------------~----~l~~ 241 (313)
T 3odt_A 183 HNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPN------------G----DIVS 241 (313)
T ss_dssp CSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSS----CEEEEEECTT------------S----CEEE
T ss_pred CcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCc----eEEEEEEecC------------C----CEEE
Confidence 456688999999999 66778899999999999999999998876 3333221110 1 1345
Q ss_pred cCCCCeEEEeeCCCCcceee
Q 015021 386 APRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 386 aprRg~lEvW~~~~g~~v~~ 405 (414)
+-.+|.|.+|++++++.+.+
T Consensus 242 ~~~dg~v~iwd~~~~~~~~~ 261 (313)
T 3odt_A 242 CGEDRTVRIWSKENGSLKQV 261 (313)
T ss_dssp EETTSEEEEECTTTCCEEEE
T ss_pred EecCCEEEEEECCCCceeEE
Confidence 67799999999999987743
No 86
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=96.41 E-value=0.017 Score=55.12 Aligned_cols=84 Identities=13% Similarity=0.094 Sum_probs=59.5
Q ss_pred ccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCccee----Eeeecccccc-----------eeeEEEEEecccccc
Q 015021 303 LKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVV----VRLWKGYRDA-----------SCVFMEMLVNKDAAT 366 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~v----vrmwKGyRdA-----------q~~wi~~~~~~~~~~ 366 (414)
+......+.+++.+|++ ++++++...|.|.++|+.++.. ++.++++.+- .+.-+... ++
T Consensus 222 ~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s---~~-- 296 (447)
T 3dw8_B 222 MEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFS---HS-- 296 (447)
T ss_dssp GGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEEC---TT--
T ss_pred ccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEEC---CC--
Confidence 44455678899999999 9999999999999999999998 8999998762 22222221 10
Q ss_pred cccccCCCCCcceEEEEEEcCCCCeEEEeeCCC-Ccceee
Q 015021 367 SSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMA-DENWTT 405 (414)
Q Consensus 367 ~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~-g~~v~~ 405 (414)
++ +|+. +-. |.|.||++++ ++.+.+
T Consensus 297 -------g~-----~l~~-~~~-~~v~iwd~~~~~~~~~~ 322 (447)
T 3dw8_B 297 -------GR-----YMMT-RDY-LSVKVWDLNMENRPVET 322 (447)
T ss_dssp -------SS-----EEEE-EES-SEEEEEETTCCSSCSCC
T ss_pred -------CC-----EEEE-eeC-CeEEEEeCCCCccccce
Confidence 11 3443 344 9999999998 776643
No 87
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.41 E-value=0.0089 Score=57.40 Aligned_cols=79 Identities=14% Similarity=-0.026 Sum_probs=57.3
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCC
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK 389 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprR 389 (414)
..+++.+|+|+++++....|.|.++|+.++..++-.+....+.-++|....-.+++ + +++-+..+
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg---------~------~l~sgs~D 365 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDG---------S------ALCTGSWD 365 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSS---------S------EEEEECTT
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCC---------C------EEEEeeCC
Confidence 67899999999999999999999999999988877632222222244332211111 1 45678899
Q ss_pred CeEEEeeCCCCcce
Q 015021 390 GIIEHLAGMADENW 403 (414)
Q Consensus 390 g~lEvW~~~~g~~v 403 (414)
|.|.||++..++++
T Consensus 366 ~~i~iW~~~~~~~i 379 (380)
T 3iz6_a 366 KNLKIWAFSGHRKI 379 (380)
T ss_dssp SCEEEEECCSSSSC
T ss_pred CCEEEEecCCCccc
Confidence 99999999988775
No 88
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.40 E-value=0.018 Score=55.38 Aligned_cols=85 Identities=12% Similarity=0.014 Sum_probs=63.1
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+......+..++.+|++++++++...|.|.++|+.++..++.++++.++ +....-.+.+ . .|
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~----v~~~~~~p~~-----------~---~l 274 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAA----VKAVAWCPWQ-----------S---NL 274 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSC----CCEEEECTTS-----------T---TE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcce----EEEEEECCCC-----------C---CE
Confidence 5556677889999999999999999999999999999999999887762 2222111110 1 13
Q ss_pred EEEc--CCCCeEEEeeCCCCcceee
Q 015021 383 AIHA--PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIya--prRg~lEvW~~~~g~~v~~ 405 (414)
++-+ ..+|.|.+|++++|+++.+
T Consensus 275 l~~~~gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 275 LATGGGTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp EEEECCTTTCEEEEEETTTCCEEEE
T ss_pred EEEecCCCCCEEEEEECCCCCEEEE
Confidence 3443 3799999999999988743
No 89
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.40 E-value=0.011 Score=55.59 Aligned_cols=80 Identities=9% Similarity=0.118 Sum_probs=56.3
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCc----ceeEeeecccccceeeEEEEEecccccccccccCCCCCc
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA----LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~----~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
.|..+...+.+++.+|+|+++|++...|.|.++|+.. ...++..+|+.+ .+....-.+++
T Consensus 102 ~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~----~v~~v~~~p~~------------ 165 (330)
T 2hes_X 102 IIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ----DVKHVIWHPSE------------ 165 (330)
T ss_dssp EEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS----CEEEEEECSSS------------
T ss_pred EEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC----ceEEEEECCCC------------
Confidence 4566677889999999999999999999999999942 357788888876 33322211111
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCC
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMAD 400 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g 400 (414)
-+++-+..+|.|.+|+++.+
T Consensus 166 ---~~l~s~s~D~~i~iW~~~~~ 185 (330)
T 2hes_X 166 ---ALLASSSYDDTVRIWKDYDD 185 (330)
T ss_dssp ---SEEEEEETTSCEEEEEEETT
T ss_pred ---CEEEEEcCCCeEEEEECCCC
Confidence 14567788999999998766
No 90
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.35 E-value=0.02 Score=53.90 Aligned_cols=86 Identities=9% Similarity=0.110 Sum_probs=65.5
Q ss_pred ccccCCCceeeEEEE-----CC-CCCEEEEEcCCCcEEEEEcCc-------ceeEeeecccccceeeEEEEEeccccccc
Q 015021 301 TCLKDHPRKGERLTL-----SP-SGSLAAITDSLGRILLLDTQA-------LVVVRLWKGYRDASCVFMEMLVNKDAATS 367 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~-----sP-~~~laa~tD~lGRV~L~D~~~-------~~vvrmwKGyRdAq~~wi~~~~~~~~~~~ 367 (414)
..|..+...+.+|+. +| +++++|++...|.|.|+|+.+ +..++..+|+.+ .+....-.+++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~----~V~~~~~~~~~-- 88 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH----FVSDLALSQEN-- 88 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS----CEEEEEECSST--
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC----ceEEEEECCCC--
Confidence 457778888999998 77 899999999999999999974 567788889887 34332211111
Q ss_pred ccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 368 SAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 368 ~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
.+++-+..+|.|.||++++|+++.+
T Consensus 89 -------------~~l~s~s~D~~v~lwd~~~~~~~~~ 113 (343)
T 2xzm_R 89 -------------CFAISSSWDKTLRLWDLRTGTTYKR 113 (343)
T ss_dssp -------------TEEEEEETTSEEEEEETTSSCEEEE
T ss_pred -------------CEEEEEcCCCcEEEEECCCCcEEEE
Confidence 1456788899999999999988744
No 91
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.33 E-value=0.024 Score=54.38 Aligned_cols=89 Identities=11% Similarity=0.028 Sum_probs=62.8
Q ss_pred ccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccce---eeEEEEEecccccccccccCCCCCc
Q 015021 301 TCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDAS---CVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq---~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
..+..+...+.+|+.+|+|+++|++...|.|.|+|+.++..++.+++..+.. ..++....-.+ .
T Consensus 243 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~----------~--- 309 (380)
T 3iz6_a 243 RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSI----------S--- 309 (380)
T ss_dssp EEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECS----------S---
T ss_pred EEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECC----------C---
Confidence 3455566778899999999999999999999999999999999998764421 11111110000 0
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
.. +++-+-.+|.|.||++.+++.+.
T Consensus 310 g~--~l~~g~~dg~i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 310 GR--LLFAGYSNGDCYVWDTLLAEMVL 334 (380)
T ss_dssp SS--EEEEECTTSCEEEEETTTCCEEE
T ss_pred CC--EEEEEECCCCEEEEECCCCceEE
Confidence 11 33446679999999999888763
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=96.29 E-value=0.026 Score=50.88 Aligned_cols=53 Identities=13% Similarity=0.075 Sum_probs=46.4
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVF 355 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~w 355 (414)
+..+...+.+++.+|+|+++|++...|.|.|+|+.++..++.++|+......+
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~ 115 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSL 115 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEe
Confidence 44566778999999999999999999999999999999999999998855443
No 93
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.25 E-value=0.69 Score=42.39 Aligned_cols=67 Identities=3% Similarity=-0.087 Sum_probs=47.7
Q ss_pred CCCEEEEEcCCCcEEEEEcCcce----eEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEE
Q 015021 318 SGSLAAITDSLGRILLLDTQALV----VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393 (414)
Q Consensus 318 ~~~laa~tD~lGRV~L~D~~~~~----vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lE 393 (414)
+++++|++...|.|.|+|+.++. .++.++|+.+ ++....-.+.+ . .. .+++-+..+|.|.
T Consensus 169 ~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~----~V~~v~~sp~~---------~-~~--~~las~s~D~~v~ 232 (297)
T 2pm7_B 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSD----WVRDVAWSPTV---------L-LR--SYMASVSQDRTCI 232 (297)
T ss_dssp -CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSS----CEEEEEECCCC---------S-SS--EEEEEEETTSCEE
T ss_pred CcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCC----ceEEEEECCCC---------C-Cc--eEEEEEECCCcEE
Confidence 36789999999999999998876 7778899988 55543321110 0 00 2456788899999
Q ss_pred EeeCCCC
Q 015021 394 HLAGMAD 400 (414)
Q Consensus 394 vW~~~~g 400 (414)
||+++++
T Consensus 233 iWd~~~~ 239 (297)
T 2pm7_B 233 IWTQDNE 239 (297)
T ss_dssp EEEESST
T ss_pred EEEeCCC
Confidence 9998875
No 94
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=96.25 E-value=0.02 Score=58.92 Aligned_cols=84 Identities=11% Similarity=0.128 Sum_probs=66.8
Q ss_pred ccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 303 LKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~-laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
|..+.+.+.+++.+|++. ++|++...|.|.|+|..++..++.++|+.+ ++....-.+++ +
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~----~V~~v~fspdg---------~------ 203 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTK----FVHSVRYNPDG---------S------ 203 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSS----CEEEEEECTTS---------S------
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccC----ceEEEEECCCC---------C------
Confidence 556677899999999996 588888899999999999999999999998 56544322211 1
Q ss_pred EEEEcCCCCeEEEeeCCCCcceee
Q 015021 382 LAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
+++-+..+|.|.+|++++|+++.+
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEECCCcEEEEECCCCcEeee
Confidence 456788899999999999887754
No 95
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.20 E-value=0.023 Score=52.50 Aligned_cols=82 Identities=9% Similarity=-0.012 Sum_probs=60.6
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCc--ceeEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA--LVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~--~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
+.-+...+.+++.+|+|+++|++...|.|.|+|+.. +..++.++|+.+ .|....-..+ ...
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~----~V~~v~~s~~---------~~g---- 67 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEG----PVWRVDWAHP---------KFG---- 67 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSS----CEEEEEECCG---------GGC----
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccC----CeEEEEecCC---------CcC----
Confidence 445667788999999999999999999999999974 478899999987 3332211100 000
Q ss_pred EEEEEcCCCCeEEEeeCCCCc
Q 015021 381 CLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~ 401 (414)
-+++-+..+|.|.||++++|+
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~ 88 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGR 88 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSC
T ss_pred CEEEEEcCCCEEEEEEcCCCc
Confidence 145677889999999999874
No 96
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=96.16 E-value=0.014 Score=57.07 Aligned_cols=83 Identities=11% Similarity=0.103 Sum_probs=61.0
Q ss_pred CceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEe----eecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 307 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR----LWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvr----mwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
...+.+|+.+|+|+++++++..|+|.++|+.++...+ .++|+.+. +.-+....+.+ ++ -+
T Consensus 149 ~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~-v~~~~~sp~~~---------~~------~~ 212 (450)
T 2vdu_B 149 SKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSM-LTDVHLIKDSD---------GH------QF 212 (450)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSC-EEEEEEEECTT---------SC------EE
T ss_pred CCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCc-eEEEEEcCCCC---------CC------cE
Confidence 3557789999999999999999999999999988665 77887752 22222111100 00 25
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++.+-.+|.|.||++++|+.+.+
T Consensus 213 l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 213 IITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp EEEEETTSCEEEEEESCTTCEEE
T ss_pred EEEEcCCCcEEEEECCCCceeee
Confidence 57788899999999999988755
No 97
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.08 E-value=0.02 Score=59.59 Aligned_cols=81 Identities=21% Similarity=0.170 Sum_probs=61.9
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
.+..+...+.+++++|+|++++++...|.|.|+|+.++..++.++||.+. |....-.+++ +
T Consensus 425 ~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~----v~~~~~s~~~-----------~---- 485 (694)
T 3dm0_A 425 RLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKD----VLSVAFSLDN-----------R---- 485 (694)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC----EEEEEECTTS-----------S----
T ss_pred eecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCC----EEEEEEeCCC-----------C----
Confidence 35556677889999999999999999999999999999999999999873 3222211111 1
Q ss_pred EEEEcCCCCeEEEeeCCCCc
Q 015021 382 LAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~ 401 (414)
+++-+..+|.|.||++....
T Consensus 486 ~l~s~s~D~~i~iwd~~~~~ 505 (694)
T 3dm0_A 486 QIVSASRDRTIKLWNTLGEC 505 (694)
T ss_dssp CEEEEETTSCEEEECTTSCE
T ss_pred EEEEEeCCCEEEEEECCCCc
Confidence 34677889999999986543
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.02 E-value=0.029 Score=53.89 Aligned_cols=72 Identities=15% Similarity=0.268 Sum_probs=55.9
Q ss_pred ECCCCCEEEEEcCCCcEEEEEcCcceeEeeecc--cccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeE
Q 015021 315 LSPSGSLAAITDSLGRILLLDTQALVVVRLWKG--YRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGII 392 (414)
Q Consensus 315 ~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKG--yRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~l 392 (414)
.+|++++++++...|.|.++|+.++..++.+++ +.+ .+....-.+++ -+++-+-.+|.|
T Consensus 178 ~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~----~v~~~~~s~~~---------------~~l~s~~~dg~i 238 (437)
T 3gre_A 178 VNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG----AVSSICIDEEC---------------CVLILGTTRGII 238 (437)
T ss_dssp ECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC----CEEEEEECTTS---------------CEEEEEETTSCE
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC----ceEEEEECCCC---------------CEEEEEcCCCeE
Confidence 779999999999999999999999999999998 444 34333221111 145667889999
Q ss_pred EEeeCCCCcceee
Q 015021 393 EHLAGMADENWTT 405 (414)
Q Consensus 393 EvW~~~~g~~v~~ 405 (414)
.||++++++.+.+
T Consensus 239 ~iwd~~~~~~~~~ 251 (437)
T 3gre_A 239 DIWDIRFNVLIRS 251 (437)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEEcCCccEEEE
Confidence 9999999988754
No 99
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.02 E-value=0.021 Score=55.26 Aligned_cols=82 Identities=9% Similarity=-0.079 Sum_probs=60.1
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
|..+...... ++++++++++++...|.|.++|+.++..++.++|+.+ .|....-.+ +. +
T Consensus 117 l~~h~~~v~~-~~~~~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~----~V~~l~~~~-------------~~---~ 175 (464)
T 3v7d_B 117 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDG----GVWALKYAH-------------GG---I 175 (464)
T ss_dssp EECCSSSCEE-EEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS----CEEEEEECS-------------TT---E
T ss_pred EcCCCCCcEE-EEEECCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCc----CEEEEEEcC-------------CC---E
Confidence 4444443322 5666788999999999999999999999999999987 333322111 11 4
Q ss_pred EEEcCCCCeEEEeeCCCCcceee
Q 015021 383 AIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~~ 405 (414)
++-+..+|.|.||++++|+++.+
T Consensus 176 l~s~s~dg~i~vwd~~~~~~~~~ 198 (464)
T 3v7d_B 176 LVSGSTDRTVRVWDIKKGCCTHV 198 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEEeCCCCEEEEECCCCcEEEE
Confidence 56677899999999999987754
No 100
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.016 Score=63.64 Aligned_cols=90 Identities=12% Similarity=0.104 Sum_probs=64.7
Q ss_pred CccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEe-----eec-ccccceeeEEEEEecc-----cccccc
Q 015021 300 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR-----LWK-GYRDASCVFMEMLVNK-----DAATSS 368 (414)
Q Consensus 300 l~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvr-----mwK-GyRdAq~~wi~~~~~~-----~~~~~~ 368 (414)
+..|..+...+.+|+.||+| ++|+++..|.|.|+|+.++.++. -|+ |+.+ ||...+=. +++
T Consensus 568 ~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~----~V~sv~Fs~~~~~~Dg--- 639 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA----CVTCIEFVIMEYGDDG--- 639 (902)
T ss_dssp EEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC----CEEEEEEEEEECTTSS---
T ss_pred eEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhcccccc----ceEEEEEEEEecCCCC---
Confidence 34466677889999999999 99999999999999999988764 343 6655 44333211 111
Q ss_pred cccCCCCCcceEEEEEEcCCCCeEEEeeC---CCCcceeec
Q 015021 369 AYYAPVKSDYCLCLAIHAPRKGIIEHLAG---MADENWTTS 406 (414)
Q Consensus 369 ~~~~~~k~~~~l~LvIyaprRg~lEvW~~---~~g~~v~~~ 406 (414)
. . . -.++-+..+|.|.+|++ ++|+++++-
T Consensus 640 ------~-~-~-~~l~sgs~D~tv~~wd~~p~~~g~~~~~~ 671 (902)
T 2oaj_A 640 ------Y-S-S-ILMVCGTDMGEVITYKILPASGGKFDVQL 671 (902)
T ss_dssp ------S-E-E-EEEEEEETTSEEEEEEEEECGGGCEEEEE
T ss_pred ------C-c-c-eEEEEEecCCcEEEEEEecCCCCcEEEEe
Confidence 0 0 1 14466788999999999 899877653
No 101
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.97 E-value=0.027 Score=54.65 Aligned_cols=38 Identities=16% Similarity=0.085 Sum_probs=34.7
Q ss_pred EEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 313 i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
.++++++++++++...|.|.++|+.++..++..+|+.+
T Consensus 137 ~~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~ 174 (435)
T 1p22_A 137 YCLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG 174 (435)
T ss_dssp EEEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSS
T ss_pred EEEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC
Confidence 46677999999999999999999999999999999987
No 102
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=95.88 E-value=0.019 Score=53.69 Aligned_cols=82 Identities=7% Similarity=-0.030 Sum_probs=57.6
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcce--eEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~--vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
+..+...+.+++.+|+|+++|++...|.|.|+|+.++. .++.++|+.+ .|....-.++ ....
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~----~V~~v~~~~~---------~~~~--- 72 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEG----PVWQVAWAHP---------MYGN--- 72 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSS----CEEEEEECCG---------GGSS---
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCc----cEEEEEeCCC---------CCCC---
Confidence 45667788999999999999999999999999998874 5778899987 3333221100 0001
Q ss_pred EEEEEcCCCCeEEEeeCCCCc
Q 015021 381 CLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~ 401 (414)
+++-+..+|.|.||++++|+
T Consensus 73 -~l~s~s~D~~v~iWd~~~~~ 92 (316)
T 3bg1_A 73 -ILASCSYDRKVIIWREENGT 92 (316)
T ss_dssp -CEEEEETTSCEEEECCSSSC
T ss_pred -EEEEEECCCEEEEEECCCCc
Confidence 44567789999999999874
No 103
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.87 E-value=0.04 Score=52.08 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=59.0
Q ss_pred CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcc--eeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~--~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
.+...+.+|+.+|+|+++|++...|.|.|+|+.++ ..++..+|+.+ .|....-.+++ + +
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~----~v~~v~~sp~~---------~------~ 119 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN----EVKSVAWAPSG---------N------L 119 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS----CEEEEEECTTS---------S------E
T ss_pred ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC----CceEEEEeCCC---------C------E
Confidence 45667889999999999999999999999999876 46788899887 33322211111 1 4
Q ss_pred EEEcCCCCeEEEeeCCCCcc
Q 015021 383 AIHAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~ 402 (414)
++-+..+|.|.||+++.++.
T Consensus 120 l~s~s~D~~v~iwd~~~~~~ 139 (345)
T 3fm0_A 120 LATCSRDKSVWVWEVDEEDE 139 (345)
T ss_dssp EEEEETTSCEEEEEECTTSC
T ss_pred EEEEECCCeEEEEECCCCCC
Confidence 45677899999999987643
No 104
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.87 E-value=0.077 Score=49.78 Aligned_cols=79 Identities=11% Similarity=0.112 Sum_probs=57.7
Q ss_pred ceeeEEEECCCCCEEEEEc---CCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEE
Q 015021 308 RKGERLTLSPSGSLAAITD---SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 384 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD---~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI 384 (414)
.....++.+|+|+++++++ ..|+|.++|+.++..++..++..+..+ +.. .++ ++ +|++
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~--~~~---s~d---------g~-----~l~~ 260 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAG--IAV---TPD---------GK-----KVYV 260 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEE--EEE---CTT---------SS-----EEEE
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccE--EEE---ccC---------CC-----EEEE
Confidence 4567899999998777766 789999999999999998887654211 111 111 11 4555
Q ss_pred EcCCCCeEEEeeCCCCcceee
Q 015021 385 HAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 385 yaprRg~lEvW~~~~g~~v~~ 405 (414)
-....|.|.+|++++|+.+.+
T Consensus 261 s~~~d~~v~v~d~~~~~~~~~ 281 (391)
T 1l0q_A 261 ALSFXNTVSVIDTATNTITAT 281 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEE
T ss_pred EcCCCCEEEEEECCCCcEEEE
Confidence 567889999999999987643
No 105
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.75 E-value=0.03 Score=54.23 Aligned_cols=38 Identities=11% Similarity=0.024 Sum_probs=35.0
Q ss_pred EECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccc
Q 015021 314 TLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDA 351 (414)
Q Consensus 314 ~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdA 351 (414)
+++|+|+++++++..|.|.++|+.++..++.++|+.+.
T Consensus 124 ~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 161 (445)
T 2ovr_B 124 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 161 (445)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSC
T ss_pred EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCC
Confidence 57788999999999999999999999999999999874
No 106
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.73 E-value=0.025 Score=52.84 Aligned_cols=77 Identities=12% Similarity=-0.015 Sum_probs=56.1
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcC------------------cceeEeeecccccceeeEEEEEeccccccc
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQ------------------ALVVVRLWKGYRDASCVFMEMLVNKDAATS 367 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~------------------~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~ 367 (414)
....+.+|+.+|++++++++...|.|.++|+. .+..++.+ ++.+ ++....-.+++
T Consensus 145 h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~v~~~~~sp~~-- 217 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGG----WVHAVGFSPSG-- 217 (377)
T ss_dssp CCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSS----SEEEEEECTTS--
T ss_pred cCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCc----eEEEEEECCCC--
Confidence 55678899999999999999999999999995 46666666 6665 33332211111
Q ss_pred ccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcc
Q 015021 368 SAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 368 ~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~ 402 (414)
+ +++.+..+|.|.||+++++++
T Consensus 218 -------~------~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 218 -------N------ALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp -------S------CEEEEETTTEEC-CEECSTTS
T ss_pred -------C------EEEEEeCCCcEEEEECCCCCC
Confidence 1 445677899999999999987
No 107
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.70 E-value=0.061 Score=50.50 Aligned_cols=78 Identities=10% Similarity=0.013 Sum_probs=55.7
Q ss_pred eeeEEEECCCCCEE-EEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 309 KGERLTLSPSGSLA-AITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 309 ~~~~i~~sP~~~la-a~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
....++++|+|+++ ++....|.|.++|+.++.+++..++.. .+.-+... ++ + . +|++-..
T Consensus 33 ~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--~v~~~~~s---pd---------g---~--~l~~~~~ 93 (391)
T 1l0q_A 33 NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--SPQGVAVS---PD---------G---K--QVYVTNM 93 (391)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--SEEEEEEC---TT---------S---S--EEEEEET
T ss_pred CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--CccceEEC---CC---------C---C--EEEEEEC
Confidence 46889999999866 455578999999999999999887655 22222211 11 1 1 4555566
Q ss_pred CCCeEEEeeCCCCcceee
Q 015021 388 RKGIIEHLAGMADENWTT 405 (414)
Q Consensus 388 rRg~lEvW~~~~g~~v~~ 405 (414)
..|.|.+|++.+|+.+.+
T Consensus 94 ~~~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGT 111 (391)
T ss_dssp TTTEEEEEETTTTEEEEE
T ss_pred CCCEEEEEECCCCeEEEE
Confidence 779999999999887643
No 108
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=95.63 E-value=0.07 Score=48.48 Aligned_cols=85 Identities=13% Similarity=0.154 Sum_probs=62.5
Q ss_pred ccccCCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCcc-----eeEeeecccccceeeEEEEEecccccccccccCCC
Q 015021 301 TCLKDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQAL-----VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPV 374 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~-~~laa~tD~lGRV~L~D~~~~-----~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~ 374 (414)
..|.-+...+.+|+.+|+ ++++|++..+|.|.|+|+.++ ..++.++|+.+ +|....-.+++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~----~V~~~~~s~dg--------- 98 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSH----FVSDVVISSDG--------- 98 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSS----CEEEEEECTTS---------
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCC----CEEEEEECCCC---------
Confidence 357778889999999998 589999989999999998764 46788899887 44433222111
Q ss_pred CCcceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 375 KSDYCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 375 k~~~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
+ +++-+..+|.|.+|+...+....
T Consensus 99 ~------~l~s~~~d~~i~~~~~~~~~~~~ 122 (340)
T 4aow_A 99 Q------FALSGSWDGTLRLWDLTTGTTTR 122 (340)
T ss_dssp S------EEEEEETTSEEEEEETTTTEEEE
T ss_pred C------EEEEEcccccceEEeecccceee
Confidence 1 34556778888888888776653
No 109
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.50 E-value=0.037 Score=52.79 Aligned_cols=78 Identities=14% Similarity=0.037 Sum_probs=56.6
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEe-----eecccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR-----LWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvr-----mwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
....++.+|+++++++....|.|.++|+.++..++ .++|+.. ++....-.+.+ .++
T Consensus 124 ~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~----~v~~~~~~~~~---------------~~~ 184 (433)
T 3bws_A 124 QPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLG----FVETISIPEHN---------------ELW 184 (433)
T ss_dssp CBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCC----EEEEEEEGGGT---------------EEE
T ss_pred CceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCC----ceeEEEEcCCC---------------EEE
Confidence 34578999988888888888999999999999998 5556654 34332221111 245
Q ss_pred EEcCCCCeEEEeeCCCCcceee
Q 015021 384 IHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 384 IyaprRg~lEvW~~~~g~~v~~ 405 (414)
+-...+|.|.+|++++++.+.+
T Consensus 185 ~s~~~d~~v~~~d~~~~~~~~~ 206 (433)
T 3bws_A 185 VSQMQANAVHVFDLKTLAYKAT 206 (433)
T ss_dssp EEEGGGTEEEEEETTTCCEEEE
T ss_pred EEECCCCEEEEEECCCceEEEE
Confidence 5667789999999999887743
No 110
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=95.45 E-value=0.064 Score=51.09 Aligned_cols=84 Identities=6% Similarity=0.028 Sum_probs=50.4
Q ss_pred CccccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcce
Q 015021 300 LTCLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC 379 (414)
Q Consensus 300 l~~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~ 379 (414)
+..+..+...+.+++.+|+|+++|++...| +.++|+.++..+...... . ...+..... . .
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~~~~~-~--~~~~~~~~~-------------~-~-- 71 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMSQEMR-H--LSKVRMLHR-------------T-N-- 71 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEEEECS-C--CCEEEECTT-------------S-S--
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeeeeecC-C--eEEEEEcCC-------------C-C--
Confidence 334566778899999999999888876666 679999888766543211 1 112221100 0 1
Q ss_pred EEEEEEcCCCCeEEEeeCCCCccee
Q 015021 380 LCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 380 l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
++++-.-.++.|.||++++|+.+.
T Consensus 72 -~~~~~~~~d~~v~iWd~~~~~~~~ 95 (355)
T 3vu4_A 72 -YVAFVTGVKEVVHIWDDVKKQDVS 95 (355)
T ss_dssp -EEEEECSSTTEEEEEETTTTEEEE
T ss_pred -EEEEEECCccEEEEEECCCCcEEE
Confidence 355556667788888888887764
No 111
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=95.43 E-value=0.04 Score=60.43 Aligned_cols=35 Identities=9% Similarity=0.161 Sum_probs=31.3
Q ss_pred CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcc
Q 015021 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL 339 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~ 339 (414)
.+...+.+|+.||+|+++|++...|.|.|+|+.++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~ 520 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIETGDVVLFKYEVN 520 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEEC
T ss_pred CCCCceeEEEecCCCCeEEEEecCcEEEEEEecCc
Confidence 34456899999999999999999999999999877
No 112
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.049 Score=51.10 Aligned_cols=82 Identities=12% Similarity=0.074 Sum_probs=60.2
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcc--eeEeeecccccceeeEEEEEecccccccccccCCCCCcce
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYC 379 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~--~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~ 379 (414)
.+..+...+.+|+.+|+++++|++...|.|.|+|+.++ ..++.++|+.+ ++....-.+.. ..
T Consensus 148 ~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~----~v~~~~~~~~~-----------~~- 211 (330)
T 2hes_X 148 VLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG----TVWSSDFDKTE-----------GV- 211 (330)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS----CEEEEEECCSS-----------SS-
T ss_pred EeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC----cEEEEEecCCC-----------Ce-
Confidence 35555667889999999999999999999999999876 67889999987 44332211110 00
Q ss_pred EEEEEEcCCCCeEEEeeCCCC
Q 015021 380 LCLAIHAPRKGIIEHLAGMAD 400 (414)
Q Consensus 380 l~LvIyaprRg~lEvW~~~~g 400 (414)
.+++-+..+|.|.||+++.+
T Consensus 212 -~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 212 -FRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp -CEEEEEETTSCEEEEEEEEE
T ss_pred -eEEEEEeCCCeEEEEEecCC
Confidence 24556778999999998765
No 113
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=95.27 E-value=0.067 Score=50.24 Aligned_cols=83 Identities=12% Similarity=-0.103 Sum_probs=58.2
Q ss_pred cCCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCcceeEeeecccc-----cceeeEEEEEecccccccccccCCCCCc
Q 015021 304 KDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYR-----DASCVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 304 ~D~~R~~~~i~~sP~-~~laa~tD~lGRV~L~D~~~~~vvrmwKGyR-----dAq~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
......+.+++.+|+ +++++++...|.|.++|+.++..++..+... ...+.-+... +.+ .
T Consensus 162 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~~-----------~ 227 (416)
T 2pm9_A 162 MSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWH---PKN-----------S 227 (416)
T ss_dssp CCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEEC---SSC-----------T
T ss_pred cCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEEC---CCC-----------C
Confidence 444566789999999 6899999999999999999999999988764 2222222221 100 1
Q ss_pred ceEEEEEEcCCCC---eEEEeeCCCCcce
Q 015021 378 YCLCLAIHAPRKG---IIEHLAGMADENW 403 (414)
Q Consensus 378 ~~l~LvIyaprRg---~lEvW~~~~g~~v 403 (414)
.+++.+-.+| .|.+|+++++++.
T Consensus 228 ---~~l~~~~~d~~~~~i~~~d~~~~~~~ 253 (416)
T 2pm9_A 228 ---TRVATATGSDNDPSILIWDLRNANTP 253 (416)
T ss_dssp ---TEEEEEECCSSSCCCCEEETTSTTSC
T ss_pred ---CEEEEEECCCCCceEEEEeCCCCCCC
Confidence 1344555666 9999999997543
No 114
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=95.14 E-value=0.091 Score=47.92 Aligned_cols=76 Identities=11% Similarity=-0.100 Sum_probs=52.9
Q ss_pred ceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEc
Q 015021 308 RKGERLTLSP-SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA 386 (414)
Q Consensus 308 R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIya 386 (414)
.....++++| +|++++++ .|+|.++|+.++.+++.++.-... ..+... ++ + . +|++ +
T Consensus 255 ~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~s---~d---------g--~---~l~~-~ 312 (349)
T 1jmx_B 255 ELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTY--YCVAFD---KK---------G--D---KLYL-G 312 (349)
T ss_dssp SCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCC--CEEEEC---SS---------S--S---CEEE-E
T ss_pred CcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCc--cceEEC---CC---------C--C---EEEE-e
Confidence 4567899999 99988888 789999999999998887532211 111111 00 1 1 2444 5
Q ss_pred CCCCeEEEeeCCCCcceee
Q 015021 387 PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 387 prRg~lEvW~~~~g~~v~~ 405 (414)
-..|.|.||++++++.+.+
T Consensus 313 ~~~~~v~v~d~~~~~~~~~ 331 (349)
T 1jmx_B 313 GTFNDLAVFNPDTLEKVKN 331 (349)
T ss_dssp SBSSEEEEEETTTTEEEEE
T ss_pred cCCCeEEEEeccccceeee
Confidence 6679999999999988743
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.01 E-value=0.11 Score=49.48 Aligned_cols=84 Identities=7% Similarity=-0.116 Sum_probs=61.2
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
+.........++.+|+|+++++....|+|.++|+.++..++.+++.... ...+... ++ + . .|
T Consensus 165 ~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~-~~~~~~~---~~---------~---~--~l 226 (433)
T 3bws_A 165 YKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKW-SKILLYD---PI---------R---D--LV 226 (433)
T ss_dssp HHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSS-EEEEEEE---TT---------T---T--EE
T ss_pred ccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCC-eeEEEEc---CC---------C---C--EE
Confidence 4455567788999999999999989999999999999999998865542 2222221 11 1 1 34
Q ss_pred EEEcCCCCeEEEeeCCCCccee
Q 015021 383 AIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~v~ 404 (414)
++-...+|.|.+|++++|+.+.
T Consensus 227 ~~~~~~~~~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 227 YCSNWISEDISVIDRKTKLEIR 248 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEE
T ss_pred EEEecCCCcEEEEECCCCcEEE
Confidence 4455578999999999988764
No 116
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.89 E-value=0.16 Score=46.46 Aligned_cols=81 Identities=15% Similarity=0.084 Sum_probs=53.1
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCC
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK 389 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprR 389 (414)
...++++|+|+++++++..|+|.++|+.++.+++.++.-.+..-.+.....-.++ + . +|++-....
T Consensus 187 ~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~d---------g---~--~l~~~~~~~ 252 (353)
T 3vgz_A 187 STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTA---------R---Q--RAFITDSKA 252 (353)
T ss_dssp CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETT---------T---T--EEEEEESSS
T ss_pred cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCC---------C---C--EEEEEeCCC
Confidence 3457899999999999999999999999999998876522211111111110010 1 1 244444556
Q ss_pred CeEEEeeCCCCccee
Q 015021 390 GIIEHLAGMADENWT 404 (414)
Q Consensus 390 g~lEvW~~~~g~~v~ 404 (414)
+.|-+|++++|+.+.
T Consensus 253 ~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 253 AEVLVVDTRNGNILA 267 (353)
T ss_dssp SEEEEEETTTCCEEE
T ss_pred CEEEEEECCCCcEEE
Confidence 899999999888764
No 117
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=94.82 E-value=0.16 Score=45.82 Aligned_cols=75 Identities=7% Similarity=-0.129 Sum_probs=51.3
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
.....++++|+|++++++| |+|.++|+.++..++.++.-.. ..-+... ++ + . +|++ +-
T Consensus 241 ~~~~~~~~s~dg~~l~~~~--~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s---~d---------g---~--~l~~-~~ 298 (337)
T 1pby_B 241 VFYFSTAVNPAKTRAFGAY--NVLESFDLEKNASIKRVPLPHS--YYSVNVS---TD---------G---S--TVWL-GG 298 (337)
T ss_dssp SCEEEEEECTTSSEEEEEE--SEEEEEETTTTEEEEEEECSSC--CCEEEEC---TT---------S---C--EEEE-ES
T ss_pred CceeeEEECCCCCEEEEeC--CeEEEEECCCCcCcceecCCCc--eeeEEEC---CC---------C---C--EEEE-Ec
Confidence 4556799999999888884 9999999999998887753211 1111111 10 1 1 2333 35
Q ss_pred CCCeEEEeeCCCCccee
Q 015021 388 RKGIIEHLAGMADENWT 404 (414)
Q Consensus 388 rRg~lEvW~~~~g~~v~ 404 (414)
..|.|.||++.+|+.+.
T Consensus 299 ~~~~i~v~d~~~~~~~~ 315 (337)
T 1pby_B 299 ALGDLAAYDAETLEKKG 315 (337)
T ss_dssp BSSEEEEEETTTCCEEE
T ss_pred CCCcEEEEECcCCcEEE
Confidence 68999999999998774
No 118
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.67 E-value=0.21 Score=45.63 Aligned_cols=76 Identities=16% Similarity=0.109 Sum_probs=53.3
Q ss_pred eeeEEEECCCCCEEEEEcC-CCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 309 KGERLTLSPSGSLAAITDS-LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~-lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
....++++|+|+++.+++. .|+|.++|+.++.+++..+.-....+.|- ++ ++ +|.+-..
T Consensus 232 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s------~d---------g~-----~l~v~~~ 291 (353)
T 3vgz_A 232 FFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLAVLFN------PA---------RN-----EAYVTHR 291 (353)
T ss_dssp CEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCCEEEE------TT---------TT-----EEEEEET
T ss_pred ccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCceEEEC------CC---------CC-----EEEEEEC
Confidence 3567999999987666655 49999999999999888765332222221 00 11 3455566
Q ss_pred CCCeEEEeeCCCCccee
Q 015021 388 RKGIIEHLAGMADENWT 404 (414)
Q Consensus 388 rRg~lEvW~~~~g~~v~ 404 (414)
..|.|.+|++.+|+.+.
T Consensus 292 ~~~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 292 QAGKVSVIDAKSYKVVK 308 (353)
T ss_dssp TTTEEEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCeEEE
Confidence 68999999999988764
No 119
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=94.08 E-value=0.28 Score=47.04 Aligned_cols=92 Identities=9% Similarity=0.005 Sum_probs=59.3
Q ss_pred eeeeccCcceeeeeecc---eEEEEeecCCCCC-ceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEEEe-cC
Q 015021 34 NLLCALDMHTIALANRY---QTVIINWADPEGL-VAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLVYD-LK 108 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~---~~v~~~w~~~~~~-~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt-e~ 108 (414)
.++.+|++..++.+-.. .+.+..|+..... ...-...+.. ....|+++.+= ||-..||+|..+|.|++|+ ++
T Consensus 224 ~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~V~~~~~S--pdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTN-RFKGITSMDVD--MKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEES-SCSCEEEEEEC--TTSCEEEEEETTSCEEEEETTT
T ss_pred EEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecC-CCCCeEeEEEC--CCCCceEEEcCCCEEEEEECCC
Confidence 35667888887776433 3344445433211 1111112222 23557776553 6888999999999999999 58
Q ss_pred CcEEee-cccCccceeEEEEe
Q 015021 109 GDLVHR-QLIHPGRILKLRVR 128 (414)
Q Consensus 109 G~LL~s-Q~lh~~pV~~ik~r 128 (414)
|.++.. ..-|..+|..|.+-
T Consensus 301 ~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 301 LSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp TEEEEEETTSSSSCEEEEEEC
T ss_pred CcEEEEecCcccCCEEEEEEC
Confidence 888876 45799999999973
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=94.03 E-value=0.31 Score=47.40 Aligned_cols=81 Identities=10% Similarity=-0.004 Sum_probs=56.7
Q ss_pred ccCCCceeeEEEECC-CCCEEEEEcCCCcEEEEEcCcc---eeEeeecccccceeeEEEEEecccccccccccCCCCCcc
Q 015021 303 LKDHPRKGERLTLSP-SGSLAAITDSLGRILLLDTQAL---VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDY 378 (414)
Q Consensus 303 l~D~~R~~~~i~~sP-~~~laa~tD~lGRV~L~D~~~~---~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~ 378 (414)
+......+..|+.+| ++.++|++...|.|.++|+.++ ..+...+++.. -+....-.+. ..
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~----~v~~i~~~p~-----------~~- 290 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA----EVNCLSFNPY-----------SE- 290 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS----CEEEEEECSS-----------CT-
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC----CeEEEEeCCC-----------CC-
Confidence 444556789999999 5689999999999999999987 56666776654 2222211110 01
Q ss_pred eEEEEEEcCCCCeEEEeeCCCCc
Q 015021 379 CLCLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~ 401 (414)
++++-+-.+|.|.||+++++.
T Consensus 291 --~~l~tg~~dg~v~vwd~~~~~ 311 (430)
T 2xyi_A 291 --FILATGSADKTVALWDLRNLK 311 (430)
T ss_dssp --TEEEEEETTSEEEEEETTCTT
T ss_pred --CEEEEEeCCCeEEEEeCCCCC
Confidence 245556779999999999844
No 121
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=93.93 E-value=0.27 Score=47.79 Aligned_cols=85 Identities=15% Similarity=0.113 Sum_probs=58.9
Q ss_pred CCccccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCccee-------EeeecccccceeeEEEEEecccccccccc
Q 015021 299 PLTCLKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALVV-------VRLWKGYRDASCVFMEMLVNKDAATSSAY 370 (414)
Q Consensus 299 pl~~l~D~~R~~~~i~~sP~~~-laa~tD~lGRV~L~D~~~~~v-------vrmwKGyRdAq~~wi~~~~~~~~~~~~~~ 370 (414)
++..+..+...+..|+.+|+++ ++++++..|.|.++|+.++.. .+.++++... +....-.+
T Consensus 173 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~----v~~v~~~p------- 241 (430)
T 2xyi_A 173 PDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAV----VEDVAWHL------- 241 (430)
T ss_dssp CSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSC----EEEEEECS-------
T ss_pred CcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCC----EeeeEEeC-------
Confidence 4455677777899999999998 999999999999999998322 4566666542 22111111
Q ss_pred cCCCCCcceEEEEEEcCCCCeEEEeeCCCCc
Q 015021 371 YAPVKSDYCLCLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 371 ~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~ 401 (414)
.. . .+++-+-.+|.|.||++++++
T Consensus 242 ---~~--~--~~l~s~~~dg~i~i~d~~~~~ 265 (430)
T 2xyi_A 242 ---LH--E--SLFGSVADDQKLMIWDTRNNN 265 (430)
T ss_dssp ---SC--T--TEEEEEETTSEEEEEETTCSC
T ss_pred ---CC--C--CEEEEEeCCCeEEEEECCCCC
Confidence 00 1 144556678999999999873
No 122
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=93.82 E-value=0.14 Score=49.45 Aligned_cols=85 Identities=7% Similarity=-0.079 Sum_probs=59.8
Q ss_pred cccCCCceeeEEEECC--------CCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCC
Q 015021 302 CLKDHPRKGERLTLSP--------SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAP 373 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP--------~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~ 373 (414)
.+.-+...+.+|+.+| +++++|.+-.++.|.|+|+.++..+...+++++. +....-.+.+
T Consensus 131 ~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~----v~~v~~~p~~-------- 198 (393)
T 4gq1_A 131 GKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSP----GISVQFRPSN-------- 198 (393)
T ss_dssp TTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSC----EEEEEEETTE--------
T ss_pred ccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCC----cEEEEECCCC--------
Confidence 3555667789999998 7899999988999999999887776666666663 2211110100
Q ss_pred CCCcceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 374 VKSDYCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 374 ~k~~~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
. .+++-+..+|.|.+|++++++...
T Consensus 199 ----~--~~l~~~~~d~~v~~wd~~t~~~~~ 223 (393)
T 4gq1_A 199 ----P--NQLIVGERNGNIRIFDWTLNLSAE 223 (393)
T ss_dssp ----E--EEEEEEETTSEEEEEETTCCC---
T ss_pred ----C--ceEEecCCCCEEEEEECCCCcccc
Confidence 1 356778899999999999987653
No 123
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=93.73 E-value=0.33 Score=49.96 Aligned_cols=80 Identities=18% Similarity=-0.038 Sum_probs=53.6
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEc--CcceeEeeecccccceeeEEEEEeccc-ccccccccCCCCCcceEEEEEEc
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDT--QALVVVRLWKGYRDASCVFMEMLVNKD-AATSSAYYAPVKSDYCLCLAIHA 386 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~--~~~~vvrmwKGyRdAq~~wi~~~~~~~-~~~~~~~~~~~k~~~~l~LvIya 386 (414)
...+.+||+|+++++++..|.|.+||+ .++.+++..+.-.+. .-+.+..... + + . +|++-.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p--~~va~sp~~~~d---------g---~--~l~v~~ 244 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEA--RSVESSKFKGYE---------D---R--YTIAGA 244 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEE--EEEEECCSTTCT---------T---T--EEEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCc--ceEEeCCCcCCC---------C---C--EEEEEE
Confidence 567889999999999888899999999 899988877754331 1111110000 1 1 1 233333
Q ss_pred CCCCeEEEeeCCCCcceee
Q 015021 387 PRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 387 prRg~lEvW~~~~g~~v~~ 405 (414)
-..+.|.||+.++++.+.+
T Consensus 245 ~~~~~v~v~D~~t~~~~~~ 263 (543)
T 1nir_A 245 YWPPQFAIMDGETLEPKQI 263 (543)
T ss_dssp EESSEEEEEETTTCCEEEE
T ss_pred ccCCeEEEEecccccccee
Confidence 3468899999999987754
No 124
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.62 E-value=0.17 Score=53.97 Aligned_cols=78 Identities=12% Similarity=0.071 Sum_probs=59.8
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcce-------eEeeecccccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALV-------VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~-------vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
+...+++.||+|++.|++...|.|-|+|+.++. .++.++++...+-.||....-.+ + .
T Consensus 130 ~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-------------d-g- 194 (588)
T 2j04_A 130 RTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE-------------D-V- 194 (588)
T ss_dssp TCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET-------------T-E-
T ss_pred ccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC-------------C-c-
Confidence 457799999999999999999999999999995 58888655544445887664321 1 1
Q ss_pred EEEEEcCCCCeEEEeeCCCCcc
Q 015021 381 CLAIHAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~ 402 (414)
++-+..++.+.+|+++.++.
T Consensus 195 --Laass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 195 --LVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp --EEEEETTCCEEEECCCSSSS
T ss_pred --EEEEeCCCeEEEEECCCCcc
Confidence 24456699999999988774
No 125
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.49 E-value=0.35 Score=44.07 Aligned_cols=80 Identities=10% Similarity=-0.016 Sum_probs=49.0
Q ss_pred CceeeEEEECCCCCEEEEE-cCCCcEEEEEcCccee-EeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEE
Q 015021 307 PRKGERLTLSPSGSLAAIT-DSLGRILLLDTQALVV-VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 384 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~t-D~lGRV~L~D~~~~~v-vrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI 384 (414)
.+.. .++++|+|+++.++ ...++|.++|+.++.+ ++...+......+ +... + . .. +|+.
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~s---~----------d--g~--~l~~ 100 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMAD-VDIT---P----------D--DQ--FAVT 100 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCC-EEEC---T----------T--SS--EEEE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccc-eEEC---C----------C--CC--EEEE
Confidence 3445 89999999855555 4589999999999987 6666544332110 1110 0 0 11 2332
Q ss_pred EcCCCC--eEEEeeCCCCcceee
Q 015021 385 HAPRKG--IIEHLAGMADENWTT 405 (414)
Q Consensus 385 yaprRg--~lEvW~~~~g~~v~~ 405 (414)
.....+ .|.+|++.+|+.+.+
T Consensus 101 ~~~~~~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 101 VTGLNHPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp CCCSSSSCEEEEEETTTTEEEEE
T ss_pred ecCCCCcccEEEEECCCCCeEEE
Confidence 222223 999999999987653
No 126
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.97 E-value=0.3 Score=48.60 Aligned_cols=79 Identities=19% Similarity=0.105 Sum_probs=54.6
Q ss_pred ccCCCceeeEEEECCC-CCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 303 LKDHPRKGERLTLSPS-GSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~-~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
+..+...+..|+.+|+ ++++|++...|.|.++|+.++..+...+|+++ .+....=.+++ + +
T Consensus 145 ~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~----~v~~v~wspdg---------~-----~ 206 (434)
T 2oit_A 145 LKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTV----AVTSVCWSPKG---------K-----Q 206 (434)
T ss_dssp CCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGG----CEEEEEECTTS---------S-----C
T ss_pred cCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCC----ceeEEEEcCCC---------C-----E
Confidence 3445567889999998 78999999999999999999977766677655 22221111111 1 2
Q ss_pred EEEEcCCCCeEEEeeCCCCc
Q 015021 382 LAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~ 401 (414)
|+ -+-.+|.|.+|+++ |+
T Consensus 207 la-sgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 207 LA-VGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp EE-EEETTSCEEEECTT-CC
T ss_pred EE-EEcCCCcEEEEccC-Cc
Confidence 33 34578999999998 44
No 127
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=92.94 E-value=0.25 Score=50.89 Aligned_cols=84 Identities=8% Similarity=-0.094 Sum_probs=59.7
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcc-eeEeeecccccceeeEEEEEe--cccccccccccCCCCCcc
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQAL-VVVRLWKGYRDASCVFMEMLV--NKDAATSSAYYAPVKSDY 378 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~-~vvrmwKGyRdAq~~wi~~~~--~~~~~~~~~~~~~~k~~~ 378 (414)
.|.-....+.+++.+|++ .+|++...|.|.|+|+.++ ..+..++|+.+ .|.... ..+. + .
T Consensus 261 ~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~----~V~sv~~~~s~~---------g--~- 323 (524)
T 2j04_B 261 TLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS----YILSVSTAYSDF---------E--D- 323 (524)
T ss_dssp EECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSS----CEEEEEEECCTT---------S--C-
T ss_pred EEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccc----cEEEEEEEcCCC---------C--C-
Confidence 455555678889999875 6777788899999999987 45566888876 444321 1110 0 0
Q ss_pred eEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 379 CLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 379 ~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
.+++-+..+|.|.||++++++++.
T Consensus 324 --~~laS~S~D~tvklWD~~~~~~~~ 347 (524)
T 2j04_B 324 --TVVSTVAVDGYFYIFNPKDIATTK 347 (524)
T ss_dssp --CEEEEEETTSEEEEECGGGHHHHC
T ss_pred --eEEEEeccCCeEEEEECCCCCccc
Confidence 266788999999999999887654
No 128
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=92.79 E-value=0.33 Score=44.16 Aligned_cols=75 Identities=11% Similarity=-0.092 Sum_probs=51.1
Q ss_pred EEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeE
Q 015021 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGII 392 (414)
Q Consensus 313 i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~l 392 (414)
+++++++++.++....|.|.++|+.++.+++.++.-..-...-+.+. ++ + . ++++-....+.|
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s---~d---------g---~--~~~v~~~~~~~i 67 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMA---PD---------N---R--TAYVLNNHYGDI 67 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEEC---TT---------S---S--EEEEEETTTTEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEEC---CC---------C---C--EEEEEeCCCCcE
Confidence 45788888888888889999999999999988875431011111111 10 1 1 344555678999
Q ss_pred EEeeCCCCccee
Q 015021 393 EHLAGMADENWT 404 (414)
Q Consensus 393 EvW~~~~g~~v~ 404 (414)
.+|++.+|+.+.
T Consensus 68 ~~~d~~t~~~~~ 79 (349)
T 1jmx_B 68 YGIDLDTCKNTF 79 (349)
T ss_dssp EEEETTTTEEEE
T ss_pred EEEeCCCCcEEE
Confidence 999999988763
No 129
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=92.74 E-value=0.39 Score=43.27 Aligned_cols=38 Identities=26% Similarity=0.323 Sum_probs=31.6
Q ss_pred eeEEEECCCCCEEEEEc------------CCCcEEEEEcCcceeEeeecc
Q 015021 310 GERLTLSPSGSLAAITD------------SLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD------------~lGRV~L~D~~~~~vvrmwKG 347 (414)
...++++|+|+++++++ ..++|.++|+.++.+++..+.
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 133 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA 133 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC
T ss_pred ccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC
Confidence 34688999998888875 569999999999999887764
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=92.73 E-value=0.13 Score=51.20 Aligned_cols=79 Identities=13% Similarity=-0.000 Sum_probs=54.9
Q ss_pred CceeeEEEECCCCCEEE----EEcCCCcEEEEEcCcc-----------eeEeeecccccceeeEEEEEeccccccccccc
Q 015021 307 PRKGERLTLSPSGSLAA----ITDSLGRILLLDTQAL-----------VVVRLWKGYRDASCVFMEMLVNKDAATSSAYY 371 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa----~tD~lGRV~L~D~~~~-----------~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~ 371 (414)
+..+.+++.+|+|+++| .....|.|.++|+.++ ..++.++|+.+. +....-.+
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~----V~~v~~~p-------- 159 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGM----VIDMKWNP-------- 159 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGS----EEEEEECS--------
T ss_pred CCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCc----eEEEEECC--------
Confidence 45688999999998888 4577899999999876 126778887662 22211111
Q ss_pred CCCCCcceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 372 APVKSDYCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 372 ~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
.. . .+++-+..+|.|.||++++++++
T Consensus 160 --~~--~--~~las~s~Dg~v~iwD~~~~~~~ 185 (434)
T 2oit_A 160 --TV--P--SMVAVCLADGSIAVLQVTETVKV 185 (434)
T ss_dssp --SC--T--TEEEEEETTSCEEEEEESSSEEE
T ss_pred --CC--C--CEEEEEECCCeEEEEEcCCCcce
Confidence 00 1 14455677999999999998665
No 131
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.64 E-value=0.29 Score=45.46 Aligned_cols=83 Identities=10% Similarity=0.046 Sum_probs=57.2
Q ss_pred cccCCCceeeEEEECCC--CCEEEEEcCCCcEEEEEcCcc--eeEeeecccccceeeEEEEEecccccccccccCCCCCc
Q 015021 302 CLKDHPRKGERLTLSPS--GSLAAITDSLGRILLLDTQAL--VVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~--~~laa~tD~lGRV~L~D~~~~--~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
.|..+...+..|+.+|. ++++|++...|.|.++|+.++ ..++..+|+.+. +....-.+ .. .
T Consensus 52 ~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~----V~~v~~~p----------~~-~ 116 (316)
T 3bg1_A 52 DLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSS----VNSVCWAP----------HD-Y 116 (316)
T ss_dssp EEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSC----CCEEEECC----------TT-T
T ss_pred EEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCc----eEEEEECC----------CC-C
Confidence 35566677888999864 788888889999999999987 356677887762 22111111 00 0
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCCc
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMADE 401 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~ 401 (414)
. .+++-+-.+|.|.+|+++.+.
T Consensus 117 g--~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 117 G--LILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp C--SCEEEECSSSCEEEEEECSSS
T ss_pred C--cEEEEEcCCCCEEEEecCCCC
Confidence 0 144667789999999998864
No 132
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=92.56 E-value=0.33 Score=48.75 Aligned_cols=95 Identities=7% Similarity=-0.089 Sum_probs=54.6
Q ss_pred CCceeeEEEECCC----CCEEEEEcCCCcEEEEEcCcceeEee-ecccccceeeEEEEEeccccccc----ccccCCCCC
Q 015021 306 HPRKGERLTLSPS----GSLAAITDSLGRILLLDTQALVVVRL-WKGYRDASCVFMEMLVNKDAATS----SAYYAPVKS 376 (414)
Q Consensus 306 ~~R~~~~i~~sP~----~~laa~tD~lGRV~L~D~~~~~vvrm-wKGyRdAq~~wi~~~~~~~~~~~----~~~~~~~k~ 376 (414)
+.|.+.+|+.||+ +++.+.+... +-++++.+|..+.- ..||-. +|++..-.+++.. ..+......
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~----~V~~~~~s~dG~~~~s~~~~~~~v~~ 183 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQ----QVEVMTFAEDGGGKENQFLMPPEETI 183 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTC----EEEEEEECTTSCEEEEEEECCCSSCE
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCC----cEEEEEECCCCceeeeeccCCCceee
Confidence 3578889999999 8877775444 44567777887776 466655 5555443222200 000000000
Q ss_pred -cce-----EEEEEEcCCCCeEEEeeCCCCcceeec
Q 015021 377 -DYC-----LCLAIHAPRKGIIEHLAGMADENWTTS 406 (414)
Q Consensus 377 -~~~-----l~LvIyaprRg~lEvW~~~~g~~v~~~ 406 (414)
.++ .=+++-+..++.|.||++++|+++.|-
T Consensus 184 l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp EEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEE
Confidence 000 014567788999999999999988663
No 133
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=91.74 E-value=0.15 Score=51.47 Aligned_cols=84 Identities=19% Similarity=0.091 Sum_probs=54.6
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCC--cEEEEEcCcceeEeeecccccc--eee-EEEEEecccccccccccCCCCCc
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLG--RILLLDTQALVVVRLWKGYRDA--SCV-FMEMLVNKDAATSSAYYAPVKSD 377 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lG--RV~L~D~~~~~vvrmwKGyRdA--q~~-wi~~~~~~~~~~~~~~~~~~k~~ 377 (414)
|.+.......++.||||+++|.+|..| +|.++|+.++... +..++... .+. +-... . .-.| +
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~---~------~~sp---d 256 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITW---L------GYLP---D 256 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEE---E------EECT---T
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccc---e------eEcC---C
Confidence 444455668899999999888889889 9999999999887 77665331 011 00000 0 0001 1
Q ss_pred ceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 378 YCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 378 ~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
. .+++.+-++|.+.+|.+ |+.+
T Consensus 257 g--~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 257 G--RLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp S--CEEEEEEETTEEEEEET--TEEE
T ss_pred C--cEEEEEEcCCcEEEEEE--CCee
Confidence 1 25566677899999998 6655
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.23 E-value=0.55 Score=40.92 Aligned_cols=46 Identities=17% Similarity=0.203 Sum_probs=37.9
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCc-ceeEeeecccc
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQA-LVVVRLWKGYR 349 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~-~~vvrmwKGyR 349 (414)
+.........++.+|+|++++++. .|.|.++|+.+ +...++.++..
T Consensus 37 ~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~ 83 (297)
T 2ojh_A 37 VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFA 83 (297)
T ss_dssp EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTC
T ss_pred eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccc
Confidence 334456788999999999888765 68999999999 99999888774
No 135
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=91.04 E-value=0.52 Score=51.76 Aligned_cols=46 Identities=9% Similarity=0.083 Sum_probs=39.6
Q ss_pred CCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 305 DHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
........++.||+|+++|.+...++|.++|+.++.+.++.+++..
T Consensus 376 ~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~ 421 (1045)
T 1k32_A 376 ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA 421 (1045)
T ss_dssp CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS
T ss_pred CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC
Confidence 3445678899999999999998999999999999999999877654
No 136
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=91.01 E-value=0.55 Score=47.14 Aligned_cols=68 Identities=16% Similarity=0.022 Sum_probs=47.9
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCe
Q 015021 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGI 391 (414)
Q Consensus 312 ~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~ 391 (414)
.+..+.++.++|+....|.|-|+|+.+|..++..+|+.+.-+.-+... ++ ++ +++-+-.+|.
T Consensus 288 ~lsg~~sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafS---PD---------G~------~LaSGS~D~T 349 (356)
T 2w18_A 288 FLEGDVKDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWS---GT---------DS------HLLAGQKDGN 349 (356)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEEC---SS---------SS------EEEEECTTSC
T ss_pred eEccccCCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEEC---CC---------CC------EEEEEECCCc
Confidence 344555577899988889999999999999999999987432222111 11 11 4567889999
Q ss_pred EEEeeC
Q 015021 392 IEHLAG 397 (414)
Q Consensus 392 lEvW~~ 397 (414)
|.||++
T Consensus 350 IklWd~ 355 (356)
T 2w18_A 350 IFVYHY 355 (356)
T ss_dssp EEEEEE
T ss_pred EEEecC
Confidence 999985
No 137
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.98 E-value=0.66 Score=41.86 Aligned_cols=33 Identities=12% Similarity=0.048 Sum_probs=25.3
Q ss_pred ceeeEEEECCCCCEEEEEcCC-CcEEEEEcC--cce
Q 015021 308 RKGERLTLSPSGSLAAITDSL-GRILLLDTQ--ALV 340 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~l-GRV~L~D~~--~~~ 340 (414)
.....++++|+|+++++++.. |+|.++|+. ++.
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~ 73 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGA 73 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCC
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCc
Confidence 345669999999977776555 999999987 554
No 138
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=90.86 E-value=0.56 Score=45.14 Aligned_cols=100 Identities=13% Similarity=0.061 Sum_probs=53.3
Q ss_pred ccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccc---cccccCCC----
Q 015021 303 LKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAAT---SSAYYAPV---- 374 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~---~~~~~~~~---- 374 (414)
+......+.+++.+|++ +++++++..|.|.|+|+.++....--.+..+....|........... ...+....
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~ 261 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVR 261 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEE
T ss_pred ecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeee
Confidence 33445567889999998 58899999999999999999988877777777666766554322110 00000000
Q ss_pred --CCcceEEEEEEcCCCCeEEEeeCCCCccee
Q 015021 375 --KSDYCLCLAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 375 --k~~~~l~LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
..+.. .++-+..++.+.||+++.++...
T Consensus 262 ~~~~dg~--~l~s~s~d~~i~vwd~~~~~~~~ 291 (393)
T 4gq1_A 262 WIGSDGS--GILAMCKSGAWLRWNLFANNDYN 291 (393)
T ss_dssp EETTTTC--EEEEECTTSEEEEEEC-------
T ss_pred eecCCCC--EEEEEeCCCCEEEEECccCCCCc
Confidence 00111 34556788999999999887653
No 139
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=90.59 E-value=1.1 Score=40.85 Aligned_cols=74 Identities=11% Similarity=-0.022 Sum_probs=47.5
Q ss_pred eeEEEECCCCCEEEEE-cCCCcEEEEEcCccee---EeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEE
Q 015021 310 GERLTLSPSGSLAAIT-DSLGRILLLDTQALVV---VRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIH 385 (414)
Q Consensus 310 ~~~i~~sP~~~laa~t-D~lGRV~L~D~~~~~v---vrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIy 385 (414)
...++++|+|+++.++ ...++|.++|+.++.+ ++.+.+-.. ..-+.+. ++ + . +|++-
T Consensus 178 ~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~--~~~~~~s---pd---------g---~--~l~v~ 238 (331)
T 3u4y_A 178 PFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNL--PGTIVVS---RD---------G---S--TVYVL 238 (331)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSC--CCCEEEC---TT---------S---S--EEEEE
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCC--CceEEEC---CC---------C---C--EEEEE
Confidence 4788999999865554 5678999999999988 655543211 1111110 00 1 1 34444
Q ss_pred cCCCCeEEEeeCCCCcc
Q 015021 386 APRKGIIEHLAGMADEN 402 (414)
Q Consensus 386 aprRg~lEvW~~~~g~~ 402 (414)
....+.|.+|++++|+.
T Consensus 239 ~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 239 TESTVDVFNFNQLSGTL 255 (331)
T ss_dssp CSSEEEEEEEETTTTEE
T ss_pred EcCCCEEEEEECCCCce
Confidence 45678899999998877
No 140
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=90.33 E-value=1.7 Score=39.12 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=25.3
Q ss_pred CceeeEEEECCCCCEEEEEc-CCCcEEEEEcC
Q 015021 307 PRKGERLTLSPSGSLAAITD-SLGRILLLDTQ 337 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD-~lGRV~L~D~~ 337 (414)
.+....|+.+|+|+++++++ ..|+|.++|+.
T Consensus 230 ~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 230 TRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp CCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 35567899999998776654 78999999998
No 141
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=90.29 E-value=0.78 Score=48.96 Aligned_cols=75 Identities=8% Similarity=0.100 Sum_probs=48.9
Q ss_pred CceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc----ceeeEEEEEecccccccccccCCCCCcceEEE
Q 015021 307 PRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD----ASCVFMEMLVNKDAATSSAYYAPVKSDYCLCL 382 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd----Aq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~L 382 (414)
...+..++-||+|+++|++++.|.|.|+|..+ .+...+ +-. .++.=+.. .++ ++ +|
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svaf---SPD---------G~-----~L 144 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEW---NPI---------ES-----SI 144 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEE---CSS---------SS-----CE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEE---cCC---------CC-----EE
Confidence 35688999999999999999999999999665 333333 111 01111111 111 11 23
Q ss_pred EEEcCCCCeEEEeeCCCCcc
Q 015021 383 AIHAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 383 vIyaprRg~lEvW~~~~g~~ 402 (414)
.-+..+|.|+||+++.|+.
T Consensus 145 -Asgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 145 -VVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp -EEEETTSEEEEEECCCCTT
T ss_pred -EEEcCCCEEEEEECCCCcc
Confidence 3467799999999999863
No 142
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=90.02 E-value=2.5 Score=39.30 Aligned_cols=77 Identities=12% Similarity=0.068 Sum_probs=44.9
Q ss_pred eeEEEECCCCCEEEEEcCC--CcEEEEEcC--cce--eEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 310 GERLTLSPSGSLAAITDSL--GRILLLDTQ--ALV--VVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~l--GRV~L~D~~--~~~--vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
...|++||+|+++++++.. ++|.++|+. ++. .+..... .....-+.+. ++ ++ +|+
T Consensus 261 ~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~--g~~~~~~~~s---pd---------g~-----~l~ 321 (361)
T 3scy_A 261 SGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT--GIHPRNFIIT---PN---------GK-----YLL 321 (361)
T ss_dssp EEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC--SSCCCEEEEC---TT---------SC-----EEE
T ss_pred cccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC--CCCCceEEEC---CC---------CC-----EEE
Confidence 3689999999988777665 899999885 454 3332222 1111111110 10 11 455
Q ss_pred EEcCCCCeEEEe--eCCCCcceee
Q 015021 384 IHAPRKGIIEHL--AGMADENWTT 405 (414)
Q Consensus 384 IyaprRg~lEvW--~~~~g~~v~~ 405 (414)
+-....+.|.|| +..+|+...+
T Consensus 322 ~~~~~~~~v~v~~~d~~~g~~~~~ 345 (361)
T 3scy_A 322 VACRDTNVIQIFERDQATGLLTDI 345 (361)
T ss_dssp EEETTTTEEEEEEECTTTCCEEEC
T ss_pred EEECCCCCEEEEEEECCCCcEeec
Confidence 555567899995 5557776544
No 143
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=90.02 E-value=1.6 Score=42.68 Aligned_cols=48 Identities=15% Similarity=0.151 Sum_probs=35.8
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCC---CcEEEEEcCcceeEeeeccccc
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSL---GRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~l---GRV~L~D~~~~~vvrmwKGyRd 350 (414)
.|..+......++.||+|+++|.+... .+|.++|+.++...++ .++.+
T Consensus 173 ~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l-~~~~~ 223 (415)
T 2hqs_A 173 VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQV-ASFPR 223 (415)
T ss_dssp EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEE-ECCSS
T ss_pred EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEe-ecCCC
Confidence 355556678899999999877776544 4999999999988654 44443
No 144
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=89.51 E-value=1.4 Score=42.44 Aligned_cols=71 Identities=13% Similarity=0.029 Sum_probs=48.8
Q ss_pred EEECCCCCEEEEEcC-----------CCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 313 LTLSPSGSLAAITDS-----------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 313 i~~sP~~~laa~tD~-----------lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
++++|+++.+-++.. -++|.+||+.++.+++-+++.. ..-+.+..+ + . +
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~---p~~ia~spd------------g---~--~ 318 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD---ALSMTIDQQ------------R---N--L 318 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT---CCEEEEETT------------T---T--E
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC---eeEEEECCC------------C---C--E
Confidence 678999865555422 3589999999999999998776 333332211 1 1 2
Q ss_pred EEEEcCCCCeEEEeeCCCC--cceee
Q 015021 382 LAIHAPRKGIIEHLAGMAD--ENWTT 405 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g--~~v~~ 405 (414)
|+ +..++.|-||++++| +.+.+
T Consensus 319 l~--v~n~~~v~v~D~~t~~l~~~~~ 342 (361)
T 2oiz_A 319 ML--TLDGGNVNVYDISQPEPKLLRT 342 (361)
T ss_dssp EE--EECSSCEEEEECSSSSCEEEEE
T ss_pred EE--EeCCCeEEEEECCCCcceeeEE
Confidence 33 333499999999999 88865
No 145
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=89.50 E-value=0.42 Score=49.26 Aligned_cols=72 Identities=7% Similarity=-0.015 Sum_probs=54.1
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCC
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRK 389 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprR 389 (414)
..+|+.+|+++.+|+++..+.|-|+|+.++..++...|+.+ +|....-.+.+ . +++-+..+
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~----~V~sva~Sp~g------------~---~l~Sgs~D 418 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRET----TITAIGVSRLH------------P---MVLAGSAD 418 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSS----CEEEEECCSSC------------C---BCEEEETT
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCC----ceEEEEeCCCC------------C---eEEEEECC
Confidence 46789999999999999999999999999999899999887 55544322211 1 23456778
Q ss_pred CeEEEeeCCCC
Q 015021 390 GIIEHLAGMAD 400 (414)
Q Consensus 390 g~lEvW~~~~g 400 (414)
|.|.+|++..+
T Consensus 419 gtv~lwd~~~~ 429 (524)
T 2j04_B 419 GSLIITNAARR 429 (524)
T ss_dssp TEEECCBSCSS
T ss_pred CEEEEEechHh
Confidence 88888887543
No 146
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=88.93 E-value=0.7 Score=47.55 Aligned_cols=70 Identities=16% Similarity=0.248 Sum_probs=50.0
Q ss_pred ECCCCCEEEEEcCCCcEEEEEcCcceeEeeec-ccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEE
Q 015021 315 LSPSGSLAAITDSLGRILLLDTQALVVVRLWK-GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIE 393 (414)
Q Consensus 315 ~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK-GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lE 393 (414)
++|++++.++....|.|.+||..++.+++.++ |+. . +.-... +++ . +|++ +-+.|.|.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~---~-~~v~~s--pdg------------~--~l~v-~~~d~~V~ 203 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA---V-HISRMS--ASG------------R--YLLV-IGRDARID 203 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT---E-EEEEEC--TTS------------C--EEEE-EETTSEEE
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc---c-ceEEEC--CCC------------C--EEEE-ECCCCeEE
Confidence 78999888888888999999999999999998 765 2 222121 111 1 2322 23459999
Q ss_pred EeeC--CCCcceee
Q 015021 394 HLAG--MADENWTT 405 (414)
Q Consensus 394 vW~~--~~g~~v~~ 405 (414)
+|++ ++++.+.+
T Consensus 204 v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 204 MIDLWAKEPTKVAE 217 (543)
T ss_dssp EEETTSSSCEEEEE
T ss_pred EEECcCCCCcEEEE
Confidence 9999 88887754
No 147
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=88.42 E-value=0.84 Score=42.57 Aligned_cols=70 Identities=16% Similarity=0.062 Sum_probs=48.2
Q ss_pred EEECCCCCEEEE-EcCCC--cEEEEEcCcceeEeeecccccce--eeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 313 LTLSPSGSLAAI-TDSLG--RILLLDTQALVVVRLWKGYRDAS--CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 313 i~~sP~~~laa~-tD~lG--RV~L~D~~~~~vvrmwKGyRdAq--~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
.+.||+|+++|. ++..| +|.++|+.++.+.++-.|..+.. ..|- ++ ++ .++|+.
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~s------pd---------g~------~l~~~~ 99 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLS------PD---------DD------ALFYVK 99 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEEC------TT---------SS------EEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEc------CC---------CC------EEEEEe
Confidence 678999986665 55567 59999999999999998876643 2221 11 11 234444
Q ss_pred CCCeEEEeeCCCCcce
Q 015021 388 RKGIIEHLAGMADENW 403 (414)
Q Consensus 388 rRg~lEvW~~~~g~~v 403 (414)
.++.|-+|++.+|+..
T Consensus 100 ~~~~l~~~d~~~g~~~ 115 (388)
T 3pe7_A 100 DGRNLMRVDLATLEEN 115 (388)
T ss_dssp TTTEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCCcce
Confidence 5678888888888753
No 148
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=88.34 E-value=1 Score=41.56 Aligned_cols=73 Identities=14% Similarity=0.090 Sum_probs=43.5
Q ss_pred ceeeEEEECCCCCEEEEEc--CCCcEEEEEcCcceeEeeec--ccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 308 RKGERLTLSPSGSLAAITD--SLGRILLLDTQALVVVRLWK--GYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD--~lGRV~L~D~~~~~vvrmwK--GyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
.....+++||+|+++++.+ ..|+|.++|+.++..-.+-. +. .....++.+..+ ++ +|+
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~-~~~p~~~a~spd------------g~-----~l~ 101 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP-GTPPAYVAVDEA------------RQ-----LVY 101 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE-SCCCSEEEEETT------------TT-----EEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecC-CCCCEEEEECCC------------CC-----EEE
Confidence 3345699999999665553 36999999998776433321 11 122233332211 11 344
Q ss_pred EEcCCCCeEEEeeCC
Q 015021 384 IHAPRKGIIEHLAGM 398 (414)
Q Consensus 384 IyaprRg~lEvW~~~ 398 (414)
+-....|.+.+|++.
T Consensus 102 ~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 102 SANYHKGTAEVMKIA 116 (347)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEeCCCCEEEEEEeC
Confidence 445567889999985
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=87.73 E-value=3.8 Score=37.64 Aligned_cols=30 Identities=10% Similarity=0.249 Sum_probs=24.1
Q ss_pred ceeeEEEECCCCCEEEEE-cCCCcEEEEEcC
Q 015021 308 RKGERLTLSPSGSLAAIT-DSLGRILLLDTQ 337 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~t-D~lGRV~L~D~~ 337 (414)
.....++++|+|+++.++ ...++|.++|+.
T Consensus 240 ~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 240 NGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp CEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred CcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 346789999999976554 557999999997
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.07 E-value=2.2 Score=44.03 Aligned_cols=44 Identities=11% Similarity=-0.033 Sum_probs=36.3
Q ss_pred CceeeEEEECCCCCEEEEEcC-CC-----cEEEEEcCcceeEeeeccccc
Q 015021 307 PRKGERLTLSPSGSLAAITDS-LG-----RILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~-lG-----RV~L~D~~~~~vvrmwKGyRd 350 (414)
.+....++.||+|+++|.+.. .| .|.++|+.++...++..+...
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~ 85 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVV 85 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGT
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhc
Confidence 456788999999998877655 77 999999999999998876543
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=85.68 E-value=4.5 Score=37.47 Aligned_cols=77 Identities=12% Similarity=0.032 Sum_probs=44.7
Q ss_pred ceeeEEEECCCCCEEEEEcCC----CcEEEEEcCc--ceeEeeeccc-ccceeeEEEEEecccccccccccCCCCCcceE
Q 015021 308 RKGERLTLSPSGSLAAITDSL----GRILLLDTQA--LVVVRLWKGY-RDASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~l----GRV~L~D~~~--~~vvrmwKGy-RdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
.....+++||+|+++++++.. |+|.++++.. |.+-++-... -.....++.. + ++
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~----d----------g~----- 110 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT----N----------GK----- 110 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE----C----------SS-----
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE----C----------CC-----
Confidence 444568999999877776553 8998877655 5554433211 1122233332 1 11
Q ss_pred EEEEEcCCCCeEEEeeCCCCcce
Q 015021 381 CLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v 403 (414)
+|++-.-..|.|.+|++.....+
T Consensus 111 ~l~~~~~~~~~v~~~~~~~~g~~ 133 (361)
T 3scy_A 111 NIVTANYSGGSITVFPIGQDGAL 133 (361)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCB
T ss_pred EEEEEECCCCEEEEEEeCCCCcC
Confidence 34455556789999998754433
No 152
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=84.89 E-value=3 Score=40.63 Aligned_cols=44 Identities=16% Similarity=0.090 Sum_probs=33.7
Q ss_pred CCCceeeEEEECCCCCEEEEEcC---CCcEEEEEcCcceeEeeeccc
Q 015021 305 DHPRKGERLTLSPSGSLAAITDS---LGRILLLDTQALVVVRLWKGY 348 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~tD~---lGRV~L~D~~~~~vvrmwKGy 348 (414)
........++.||+|++++.+.. .++|.++|+.++.+.++..+.
T Consensus 308 ~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~ 354 (415)
T 2hqs_A 308 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTF 354 (415)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSS
T ss_pred cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCC
Confidence 34456778999999987777533 368999999999987766554
No 153
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=84.77 E-value=5.7 Score=37.41 Aligned_cols=37 Identities=8% Similarity=-0.007 Sum_probs=29.8
Q ss_pred CceeeEEEECCCCCEEEEEcC-CCcEEEEEcC-cceeEe
Q 015021 307 PRKGERLTLSPSGSLAAITDS-LGRILLLDTQ-ALVVVR 343 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~-lGRV~L~D~~-~~~vvr 343 (414)
......+++||+|++++++|. .++|.++|+. +|.+..
T Consensus 144 ~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~ 182 (365)
T 1jof_A 144 NTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL 182 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE
T ss_pred CCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE
Confidence 356778999999998888875 5899999998 776543
No 154
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=84.06 E-value=3 Score=42.71 Aligned_cols=40 Identities=20% Similarity=0.071 Sum_probs=31.3
Q ss_pred ceeeEEEECCCCCEEEEEc---------------------------------CCCcEEEEEcCcceeEeeecc
Q 015021 308 RKGERLTLSPSGSLAAITD---------------------------------SLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD---------------------------------~lGRV~L~D~~~~~vvrmwKG 347 (414)
.....+..||+|+++|.+. ..++|.++|+.++...++..+
T Consensus 181 ~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 181 GIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp TCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred CCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 3456788999998777753 457899999999998877644
No 155
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=83.59 E-value=6.9 Score=36.41 Aligned_cols=82 Identities=13% Similarity=0.118 Sum_probs=49.7
Q ss_pred eeeEEEECC-CCCEEEEEc-CCCcEEEEEcCcceeEeeecccc------cceeeEEEEEecccccccccccCCCCCcceE
Q 015021 309 KGERLTLSP-SGSLAAITD-SLGRILLLDTQALVVVRLWKGYR------DASCVFMEMLVNKDAATSSAYYAPVKSDYCL 380 (414)
Q Consensus 309 ~~~~i~~sP-~~~laa~tD-~lGRV~L~D~~~~~vvrmwKGyR------dAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l 380 (414)
.-..|+++| +|++.++-- ..+||.++| ..|..++.+.+.- .+++.+..-..-.++ ..
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~------------~g-- 208 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH------------LD-- 208 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETT------------TT--
T ss_pred CCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC------------CC--
Confidence 356799999 566554432 489999999 6788888775332 233333322211111 01
Q ss_pred EEEEEcCCCCeEEEeeCCCCcceee
Q 015021 381 CLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 381 ~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
.|.+=....+.|.+|+..+|+.+.+
T Consensus 209 ~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 209 QLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCEEEEEECCCCcEEEE
Confidence 2445556678888999887877644
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.15 E-value=2.3 Score=42.76 Aligned_cols=73 Identities=7% Similarity=-0.135 Sum_probs=47.6
Q ss_pred eEEEECCCCCEEEEEcCC----CcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEc
Q 015021 311 ERLTLSPSGSLAAITDSL----GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHA 386 (414)
Q Consensus 311 ~~i~~sP~~~laa~tD~l----GRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIya 386 (414)
.++..||||+++|.+.+. +.|.++|+.++...++ .+..+ ++..+.=.+++ + .|+ .+
T Consensus 153 ~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~l-~~~~~----~~~~~~~SpDG---------~-----~l~-~~ 212 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRVF-DSGEG----SFSSASISPGM---------K-----VTA-GL 212 (582)
T ss_dssp CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEEE-CCSSC----EEEEEEECTTS---------C-----EEE-EE
T ss_pred ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceEe-ecCCC----ccccceECCCC---------C-----EEE-Ec
Confidence 688999999887754322 6799999999987765 44433 22222111211 1 344 55
Q ss_pred CCCC--eEEEeeCCCCcce
Q 015021 387 PRKG--IIEHLAGMADENW 403 (414)
Q Consensus 387 prRg--~lEvW~~~~g~~v 403 (414)
-+.| .|.+|++.+|+..
T Consensus 213 ~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 213 ETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp ECSSCEEEEEECTTTCCEE
T ss_pred cCCCeeEEEEEcCCCCcEE
Confidence 5677 8999999988765
No 157
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=82.83 E-value=2.5 Score=43.36 Aligned_cols=71 Identities=20% Similarity=0.103 Sum_probs=46.6
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccc-ccceeeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY-RDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGy-RdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
...++++||++++++++| |.|.++|+.++...++-.+- +...+.|- ++ + + .| +|.
T Consensus 83 ~v~~~~~spd~~~~~~~~--~~i~~~d~~~~~~~~l~~~~~~~~~~~~S------pd---------G--~---~l-a~~- 138 (706)
T 2z3z_A 83 PSFRTLDAGRGLVVLFTQ--GGLVGFDMLARKVTYLFDTNEETASLDFS------PV---------G--D---RV-AYV- 138 (706)
T ss_dssp CCEEEEETTTTEEEEEET--TEEEEEETTTTEEEEEECCTTCCTTCEEC------TT---------S--S---EE-EEE-
T ss_pred CceeEEECCCCeEEEEEC--CEEEEEECCCCceEEccCCcccccCCcCC------CC---------C--C---EE-EEE-
Confidence 467899999966666666 99999999999887765431 11112221 11 1 1 22 233
Q ss_pred CCCeEEEeeCCC-----Ccce
Q 015021 388 RKGIIEHLAGMA-----DENW 403 (414)
Q Consensus 388 rRg~lEvW~~~~-----g~~v 403 (414)
+++.|-+|++.+ |+..
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~ 159 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAI 159 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCE
T ss_pred ECCeEEEEecCcccccCCCcE
Confidence 679999999998 7654
No 158
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=82.80 E-value=0.76 Score=47.19 Aligned_cols=40 Identities=10% Similarity=0.083 Sum_probs=34.4
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
..+++.+|+|++++. +..|.|.++|+.++...++..+...
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~ 58 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKI 58 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTT
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccc
Confidence 566788999998765 7889999999999999999988764
No 159
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=81.40 E-value=9.7 Score=35.37 Aligned_cols=39 Identities=13% Similarity=0.170 Sum_probs=31.4
Q ss_pred ceeeEEEECCCCCEEEEEcCC------------------------CcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGSLAAITDSL------------------------GRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~l------------------------GRV~L~D~~~~~vvrmwK 346 (414)
.....|+++|+|++.++.... |+|+++|..+|.+++.|.
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 86 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG 86 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC
Confidence 457889999999988664333 479999999999988775
No 160
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=81.18 E-value=6 Score=34.20 Aligned_cols=40 Identities=28% Similarity=0.268 Sum_probs=29.6
Q ss_pred ceeeEEEECCCCCEEEEEc----CCCcEEEEEcCcceeEeeecc
Q 015021 308 RKGERLTLSPSGSLAAITD----SLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD----~lGRV~L~D~~~~~vvrmwKG 347 (414)
.....++.+|+|++++++. ...+|..+|+.++...++-.+
T Consensus 85 ~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 128 (297)
T 2ojh_A 85 ICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKN 128 (297)
T ss_dssp CBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSS
T ss_pred ccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecC
Confidence 3456789999998777765 368999999988876555443
No 161
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.15 E-value=3.7 Score=37.95 Aligned_cols=72 Identities=13% Similarity=0.013 Sum_probs=45.4
Q ss_pred eeEEEECCCCCEEEEE-cC--CCcEEEEEcCcceeEeeecccccce--eeEEEEEecccccccccccCCCCCcceEEEEE
Q 015021 310 GERLTLSPSGSLAAIT-DS--LGRILLLDTQALVVVRLWKGYRDAS--CVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI 384 (414)
Q Consensus 310 ~~~i~~sP~~~laa~t-D~--lGRV~L~D~~~~~vvrmwKGyRdAq--~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI 384 (414)
...+++||+|+++|.+ +. ..+|.++|+.++...++-.+..... +.|- ++ + + .++
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~s------pd---------g--~----~l~ 96 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIS------TD---------E--R----AFF 96 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEEC------TT---------S--S----EEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceEC------CC---------C--C----EEE
Confidence 3457899999876654 43 3479999999999877765543211 2221 00 1 1 234
Q ss_pred EcCCCCeEEEeeCCCCcc
Q 015021 385 HAPRKGIIEHLAGMADEN 402 (414)
Q Consensus 385 yaprRg~lEvW~~~~g~~ 402 (414)
|.-.++.|-+|++..|+.
T Consensus 97 ~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEE 114 (396)
T ss_dssp EEETTTEEEEEETTTCCE
T ss_pred EEEcCCcEEEEECCCCCc
Confidence 555566788898888763
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=81.01 E-value=1.8 Score=44.58 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=27.6
Q ss_pred eeEEEECCCCCEEEEEcC---------CCcEEEEEcCccee
Q 015021 310 GERLTLSPSGSLAAITDS---------LGRILLLDTQALVV 341 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~---------lGRV~L~D~~~~~v 341 (414)
..+++.||||+++|.+.+ .|.|.++|+.++..
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~ 102 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEF 102 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEE
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCcc
Confidence 678999999998777543 68999999999988
No 163
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=80.87 E-value=5.1 Score=41.22 Aligned_cols=43 Identities=14% Similarity=0.149 Sum_probs=34.0
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccc
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYR 349 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyR 349 (414)
.......++.||+|+++|.+.. +.|.++|+.++...++-.+..
T Consensus 150 ~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 150 GEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTADGS 192 (741)
T ss_dssp SSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCCCCC
T ss_pred CCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEeccCCc
Confidence 3455788999999987666542 599999999999998876543
No 164
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=80.79 E-value=8.2 Score=40.23 Aligned_cols=81 Identities=17% Similarity=-0.004 Sum_probs=50.5
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcC--cceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcC
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQ--ALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAP 387 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~--~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyap 387 (414)
...+.+||+|+++.+++..|.|.+||+. ++.+++-.+.-.+.. =+.+ .. . +....+.+|..=|.
T Consensus 199 p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~--~ia~--s~------~---~~pDGk~l~v~n~~- 264 (567)
T 1qks_A 199 VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR--SIET--SK------M---EGWEDKYAIAGAYW- 264 (567)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE--EEEE--CC------S---TTCTTTEEEEEEEE-
T ss_pred ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc--eeEE--cc------c---cCCCCCEEEEEEcc-
Confidence 4579999999998888889999999996 887776554322210 0111 00 0 00001233444444
Q ss_pred CCCeEEEeeCCCCcceee
Q 015021 388 RKGIIEHLAGMADENWTT 405 (414)
Q Consensus 388 rRg~lEvW~~~~g~~v~~ 405 (414)
.+.|-|++..+++.+.+
T Consensus 265 -~~~v~ViD~~t~~~~~~ 281 (567)
T 1qks_A 265 -PPQYVIMDGETLEPKKI 281 (567)
T ss_dssp -TTEEEEEETTTCCEEEE
T ss_pred -CCeEEEEECCCCcEEEE
Confidence 48888999988887754
No 165
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=79.65 E-value=12 Score=35.42 Aligned_cols=48 Identities=17% Similarity=0.124 Sum_probs=39.3
Q ss_pred ccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCcceeEeee--cccccc
Q 015021 303 LKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLW--KGYRDA 351 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~vvrmw--KGyRdA 351 (414)
|+.......-|+.+|++ +|.|++|..++|+-+|+. |.++|-+ .|+.|.
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~ 72 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDL 72 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCCh
Confidence 34444568889999975 799999999999999999 8888876 677773
No 166
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=79.00 E-value=8.9 Score=34.52 Aligned_cols=45 Identities=13% Similarity=-0.059 Sum_probs=36.0
Q ss_pred ccccCCCceeeEEEECCCCC-EEEEEcCCCcEEEEEcCcceeEeeecc
Q 015021 301 TCLKDHPRKGERLTLSPSGS-LAAITDSLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 301 ~~l~D~~R~~~~i~~sP~~~-laa~tD~lGRV~L~D~~~~~vvrmwKG 347 (414)
..+.+...-.+.++.+|+|+ +.++.-..|+|..+|..++ ++.|..
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~ 66 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMH 66 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEES
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEEC
Confidence 44667778889999999998 6666666789999999998 666654
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=78.67 E-value=5 Score=37.79 Aligned_cols=35 Identities=11% Similarity=0.040 Sum_probs=26.6
Q ss_pred eeeEEE-ECCCCCEEEEEcCCC------cEEEEEcC-cceeEe
Q 015021 309 KGERLT-LSPSGSLAAITDSLG------RILLLDTQ-ALVVVR 343 (414)
Q Consensus 309 ~~~~i~-~sP~~~laa~tD~lG------RV~L~D~~-~~~vvr 343 (414)
....|+ +||+|+++++++..+ +|.++|+. +|.+.+
T Consensus 255 ~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~ 297 (365)
T 1jof_A 255 YRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEK 297 (365)
T ss_dssp EEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEE
T ss_pred ccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEE
Confidence 567899 999999877765433 89999996 676554
No 168
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=77.66 E-value=15 Score=33.37 Aligned_cols=44 Identities=16% Similarity=0.202 Sum_probs=35.8
Q ss_pred cccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeee
Q 015021 302 CLKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW 345 (414)
Q Consensus 302 ~l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmw 345 (414)
.+.+.....+.++.+|+|++.++.-..|+|.++|..++.+.++.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~ 82 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF 82 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe
Confidence 46666667789999999998777666789999999999877765
No 169
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=76.82 E-value=15 Score=33.85 Aligned_cols=39 Identities=13% Similarity=0.053 Sum_probs=33.1
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 312 ~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
.+..||+|+.++.+...+.|.++|+.++...++++....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~ 123 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE 123 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh
Confidence 357999999888888778999999999999888876544
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=76.76 E-value=3 Score=40.01 Aligned_cols=35 Identities=17% Similarity=0.244 Sum_probs=31.8
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcc--eeEeee
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQAL--VVVRLW 345 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~--~vvrmw 345 (414)
...|+++|+|+++.++.. |.|.+||+.++ .+++-.
T Consensus 307 p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 307 ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 889999999998888876 99999999999 988765
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=76.32 E-value=6 Score=40.12 Aligned_cols=44 Identities=20% Similarity=0.272 Sum_probs=36.0
Q ss_pred CceeeEEEECCCCCEEEEEcCCC--cEEEEEcCcceeEeeeccccc
Q 015021 307 PRKGERLTLSPSGSLAAITDSLG--RILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~lG--RV~L~D~~~~~vvrmwKGyRd 350 (414)
......+..+|+|++++++|..| +|.++|+.++...++..+..+
T Consensus 241 ~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~ 286 (662)
T 3azo_A 241 EEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEE 286 (662)
T ss_dssp TBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSB
T ss_pred CceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccccc
Confidence 45567889999999888888888 999999989988887766443
No 172
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=76.28 E-value=14 Score=32.90 Aligned_cols=38 Identities=8% Similarity=0.099 Sum_probs=30.3
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK 346 (414)
.....|+++|+|++.++....|+|.++|.. +..++.+.
T Consensus 30 ~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~ 67 (286)
T 1q7f_A 30 TEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFG 67 (286)
T ss_dssp SCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEEC
T ss_pred CCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEec
Confidence 346789999999988776678999999987 66666664
No 173
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=74.53 E-value=5.9 Score=39.79 Aligned_cols=74 Identities=14% Similarity=0.081 Sum_probs=50.4
Q ss_pred EECCCCCEEEEEcC-----CCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEE-EcC
Q 015021 314 TLSPSGSLAAITDS-----LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAI-HAP 387 (414)
Q Consensus 314 ~~sP~~~laa~tD~-----lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvI-yap 387 (414)
...|+++++-++|. .++|.+||..++.++...+.=+.. + +-+. ++ ...||..= |.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~-va~s---pD------------G~~lyVan~~~~ 100 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--N-PVVA---DD------------GSFIAHASTVFS 100 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--E-EEEC---TT------------SSCEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--c-EEEC---CC------------CCEEEEEccccc
Confidence 45788988888877 589999999999999988854443 2 3221 11 12233321 333
Q ss_pred ------CCCeEEEeeCCCCcceee
Q 015021 388 ------RKGIIEHLAGMADENWTT 405 (414)
Q Consensus 388 ------rRg~lEvW~~~~g~~v~~ 405 (414)
+.+.|.|||+.+++.+++
T Consensus 101 r~~~G~~~~~VsviD~~t~~v~~~ 124 (386)
T 3sjl_D 101 RIARGERTDYVEVFDPVTLLPTAD 124 (386)
T ss_dssp ETTEEEEEEEEEEECTTTCCEEEE
T ss_pred ccccCCCCCEEEEEECCCCeEEEE
Confidence 346899999999988765
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=74.25 E-value=10 Score=34.60 Aligned_cols=40 Identities=18% Similarity=0.287 Sum_probs=30.0
Q ss_pred eeeEEEECCCCCEEEEE-cC----CCcEEEEEcCcceeEeeeccc
Q 015021 309 KGERLTLSPSGSLAAIT-DS----LGRILLLDTQALVVVRLWKGY 348 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~t-D~----lGRV~L~D~~~~~vvrmwKGy 348 (414)
....+..||+|+++|.+ +. ..+|.++|+.++...++..+-
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~ 104 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK 104 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC
Confidence 35678999999866654 32 235999999999988887653
No 175
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=73.81 E-value=2.7 Score=43.26 Aligned_cols=38 Identities=5% Similarity=-0.076 Sum_probs=31.8
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 312 ~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
.+..+|+|++++.+ ..|.|.++|+.++...++..+...
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~~~~~~~~~ 57 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSYTILSNRTM 57 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEEEEECHHHH
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEEEEEccccc
Confidence 56789999876655 589999999999999999887654
No 176
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=73.70 E-value=27 Score=33.08 Aligned_cols=82 Identities=15% Similarity=0.023 Sum_probs=53.4
Q ss_pred cccCCCce-eeEEEECCCCCEEEEEc--CCCcEEEEEcCcceeEeeec---ccccceeeEEEEEecccccccccccCCCC
Q 015021 302 CLKDHPRK-GERLTLSPSGSLAAITD--SLGRILLLDTQALVVVRLWK---GYRDASCVFMEMLVNKDAATSSAYYAPVK 375 (414)
Q Consensus 302 ~l~D~~R~-~~~i~~sP~~~laa~tD--~lGRV~L~D~~~~~vvrmwK---GyRdAq~~wi~~~~~~~~~~~~~~~~~~k 375 (414)
.++-.++. -+-|.++|+|++.+++- ..++|..+|+.+|.+++-.. +++-..+.+. ++
T Consensus 14 ~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-----------------g~ 76 (266)
T 2iwa_A 14 EFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-----------------NE 76 (266)
T ss_dssp EEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-----------------TT
T ss_pred EEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-----------------CC
Confidence 35444443 37788999988777663 46899999999999999653 3333222221 01
Q ss_pred CcceEEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 376 SDYCLCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 376 ~~~~l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
.|.+-.-+.+.+.|+|.++++.+++
T Consensus 77 -----~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 77 -----KLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp -----EEEEEETTCSEEEEEETTTTEEEEE
T ss_pred -----EEEEEEecCCEEEEEECCCCcEEEE
Confidence 1334455677888888888777754
No 177
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=72.68 E-value=9 Score=39.12 Aligned_cols=18 Identities=0% Similarity=-0.199 Sum_probs=13.7
Q ss_pred cEEEEEcCcceeEeeecc
Q 015021 330 RILLLDTQALVVVRLWKG 347 (414)
Q Consensus 330 RV~L~D~~~~~vvrmwKG 347 (414)
+|.++|+.++...+...+
T Consensus 229 ~l~~~d~~~~~~~~~l~~ 246 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMP 246 (723)
T ss_dssp EEEEEESSSSCCCEECCC
T ss_pred EEEEEECCCCceeEEeeC
Confidence 789999998886555554
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=72.57 E-value=24 Score=31.23 Aligned_cols=38 Identities=3% Similarity=0.084 Sum_probs=28.5
Q ss_pred eeeEEEECCCCCEEEEEcCCC-cEEEEEcCcceeEeeecc
Q 015021 309 KGERLTLSPSGSLAAITDSLG-RILLLDTQALVVVRLWKG 347 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lG-RV~L~D~~~~~vvrmwKG 347 (414)
....|+++|+|++.++....+ +|.++|. .+..++.+.+
T Consensus 208 ~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~ 246 (286)
T 1q7f_A 208 YPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALES 246 (286)
T ss_dssp SEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEE
T ss_pred CCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcc
Confidence 346799999998877765554 9999995 5666666654
No 179
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=72.52 E-value=18 Score=35.06 Aligned_cols=76 Identities=5% Similarity=-0.122 Sum_probs=48.3
Q ss_pred eEEEECCCCCEEEE-EcC---------CCcEEEEEcCcceeEeeecccc-cceeeEEEEEecccccccccccCCCCCcce
Q 015021 311 ERLTLSPSGSLAAI-TDS---------LGRILLLDTQALVVVRLWKGYR-DASCVFMEMLVNKDAATSSAYYAPVKSDYC 379 (414)
Q Consensus 311 ~~i~~sP~~~laa~-tD~---------lGRV~L~D~~~~~vvrmwKGyR-dAq~~wi~~~~~~~~~~~~~~~~~~k~~~~ 379 (414)
+-+.++|+++.+-+ .++ -+.|.+||+.++.+++-++.=. -..++|- .+ + ++
T Consensus 270 ~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s------~D---------g--~~- 331 (373)
T 2mad_H 270 QQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVA------QD---------G--GP- 331 (373)
T ss_pred EeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEEC------CC---------C--Ce-
Confidence 34778999864444 332 3689999999999998776322 2222221 11 1 11
Q ss_pred EEEEEEcCCCCeEEEeeCCCCcceee
Q 015021 380 LCLAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 380 l~LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
.|++-.-..+.|-|+|+.+++.+.+
T Consensus 332 -~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 332 -DLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred -EEEEEcCCCCeEEEEECCCCCEEee
Confidence 2333333469999999999999866
No 180
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=72.45 E-value=8.7 Score=35.51 Aligned_cols=34 Identities=6% Similarity=-0.059 Sum_probs=28.9
Q ss_pred EEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecc
Q 015021 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 313 i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKG 347 (414)
+.++|+|++.++....|+|+.+|.. |.++.-++.
T Consensus 130 v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~ 163 (276)
T 3no2_A 130 INKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKL 163 (276)
T ss_dssp CEECTTSCEEEEETTTTEEEEECTT-SCEEEEEEC
T ss_pred ceECCCCCEEEEecCCCEEEEECCC-CCEEEEEEC
Confidence 4678999988887788999999998 998877765
No 181
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=71.73 E-value=32 Score=34.35 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=53.9
Q ss_pred CeeeeccCcceeeeeecceEEEEeec--------CCCCCceeecccCCCCCCCeEEEEEeEEeCCcEEEEEeccccEEEE
Q 015021 33 PNLLCALDMHTIALANRYQTVIINWA--------DPEGLVAKIRPELSPIASEYITAIEWLVFEEMRALAVGTSRGYFLV 104 (414)
Q Consensus 33 ~~~~~sp~~~~la~A~~~~~v~~~w~--------~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~dw~~I~VG~ssG~vrf 104 (414)
-.+++|+...+++.|..+.+++.+.. .+++....+.-.+ ++ |+++.+ |-..++|| .+|.|++
T Consensus 41 nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~l---p~--V~~l~f----d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 41 QNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEI---PD--VIFVCF----HGDQVLVS-TRNALYS 110 (388)
T ss_dssp BCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEEC---TT--EEEEEE----ETTEEEEE-ESSEEEE
T ss_pred cEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeC---CC--eeEEEE----CCCEEEEE-cCCcEEE
Confidence 45789999999999999999883311 1111111111122 23 888877 66677788 8899999
Q ss_pred Eec-CCcEEeecccCccceeEEE
Q 015021 105 YDL-KGDLVHRQLIHPGRILKLR 126 (414)
Q Consensus 105 yte-~G~LL~sQ~lh~~pV~~ik 126 (414)
|+. +-..--+|..|+.+|..|+
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~ 133 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLK 133 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEE
T ss_pred EEchhhhccCccceeecceeeEE
Confidence 984 2222234567788888766
No 182
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=70.89 E-value=5.3 Score=41.93 Aligned_cols=72 Identities=8% Similarity=0.010 Sum_probs=45.8
Q ss_pred eEEEECCCCCEEEEEcCC---------CcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 311 ERLTLSPSGSLAAITDSL---------GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 311 ~~i~~sP~~~laa~tD~l---------GRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
..+.+||||+++|.+-+. |.+.|+|+.++.+.++- ++.+ ++..+.=.+++ + .
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~-~~~~----~~~~~~~SPdG---------~---~-- 125 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEE-RIPN----NTQWVTWSPVG---------H---K-- 125 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-CCCT----TEEEEEECSST---------T---C--
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcc-cCCC----cceeeEECCCC---------C---E--
Confidence 468899999877775443 78899999999987754 3222 22222212222 1 1
Q ss_pred EEEEcCCCCeEEEeeCCCCcce
Q 015021 382 LAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~~v 403 (414)
| .|. +++.|-+|++..|+..
T Consensus 126 l-a~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 126 L-AYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp E-EEE-ETTEEEEESSTTSCCE
T ss_pred E-EEE-ECCeEEEEECCCCceE
Confidence 2 333 5788999999887643
No 183
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=70.57 E-value=35 Score=33.63 Aligned_cols=91 Identities=22% Similarity=0.233 Sum_probs=50.0
Q ss_pred ccCCCceeeEEEECCCCCEEEEE------------cCCCcEEEEEcC--cceeEee-eccc-cc-ceeeEEEEEeccccc
Q 015021 303 LKDHPRKGERLTLSPSGSLAAIT------------DSLGRILLLDTQ--ALVVVRL-WKGY-RD-ASCVFMEMLVNKDAA 365 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~t------------D~lGRV~L~D~~--~~~vvrm-wKGy-Rd-Aq~~wi~~~~~~~~~ 365 (414)
+++.....|.|.+.|+|.....+ +..|+|+++|.. ++.+.++ ..|. =| ..+.=+-+.-
T Consensus 45 i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~----- 119 (355)
T 3sre_A 45 VKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGIST----- 119 (355)
T ss_dssp CTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEE-----
T ss_pred eCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEE-----
Confidence 55545788999999999776666 689999999997 3443321 1110 00 0000000000
Q ss_pred ccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 366 TSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 366 ~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
... ......||.|=|.+.++.+|+|++..+...
T Consensus 120 ----~~d-~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~ 152 (355)
T 3sre_A 120 ----FID-DDNTVYLLVVNHPGSSSTVEVFKFQEEEKS 152 (355)
T ss_dssp ----EEC-TTCCEEEEEEECSTTCCEEEEEEEETTTTE
T ss_pred ----EEC-CCCcEEEEEEECCCCCCeEEEEEEECCCCE
Confidence 000 011234555555545899999999886544
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=70.20 E-value=19 Score=33.59 Aligned_cols=39 Identities=5% Similarity=0.009 Sum_probs=30.7
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK 346 (414)
.....|+++|+|++.++.-..|+|.++|+.++.+++.++
T Consensus 84 ~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 84 TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 456788999999654444367999999999999988665
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=70.06 E-value=15 Score=37.13 Aligned_cols=44 Identities=20% Similarity=0.033 Sum_probs=31.9
Q ss_pred CCCceeeEEEECCCCCEEEEEc--C------CCcEEEEEcC-cc---eeEeeeccc
Q 015021 305 DHPRKGERLTLSPSGSLAAITD--S------LGRILLLDTQ-AL---VVVRLWKGY 348 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~tD--~------lGRV~L~D~~-~~---~vvrmwKGy 348 (414)
+.......+..||||+++|.+. . ..+|.++|+. +| ...++..+.
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~ 240 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGP 240 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEET
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCC
Confidence 3345667789999998777643 2 2489999999 67 777777654
No 186
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=68.66 E-value=10 Score=39.26 Aligned_cols=37 Identities=19% Similarity=0.327 Sum_probs=29.1
Q ss_pred eeeEEEECCCCCEEEEEcCC------CcEEEEEcCcceeEeeec
Q 015021 309 KGERLTLSPSGSLAAITDSL------GRILLLDTQALVVVRLWK 346 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~l------GRV~L~D~~~~~vvrmwK 346 (414)
.-..+.++|+| +.+.+... |+|+++|..++.+++-|+
T Consensus 139 ~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~ 181 (462)
T 2ece_A 139 RLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWE 181 (462)
T ss_dssp EEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECC
T ss_pred cccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEc
Confidence 34567888999 55554333 899999999999999998
No 187
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=65.81 E-value=37 Score=31.68 Aligned_cols=39 Identities=13% Similarity=0.088 Sum_probs=31.7
Q ss_pred CceeeEEEECCCCCEEEEEcC------CCcEEEEEcCcceeEeeec
Q 015021 307 PRKGERLTLSPSGSLAAITDS------LGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~------lGRV~L~D~~~~~vvrmwK 346 (414)
-.....|+++|+|+|.++ |. .++|+.+|+.++.+++.+.
T Consensus 66 ~~~p~gv~~d~~g~L~v~-D~g~~~~~~~~i~~~d~~tg~~~~~~~ 110 (343)
T 2qe8_A 66 FDTVLGIKSDGNGIVWML-DNGNQSKSVPKLVAWDTLNNQLSRVIY 110 (343)
T ss_dssp CSCEEEEEECSSSEEEEE-ECHHHHTSCCEEEEEETTTTEEEEEEE
T ss_pred eeEeeEEEEcCCCcEEEE-cCCCCcCCCCeEEEEECCCCeEEEEEE
Confidence 356789999999986554 54 4899999999999888875
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=64.74 E-value=10 Score=34.20 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=33.2
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecc
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKG 347 (414)
.....|+++|+|++.+++...++|.++|..+|.+.++...
T Consensus 69 ~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 108 (296)
T 3e5z_A 69 HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADS 108 (296)
T ss_dssp SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECE
T ss_pred CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeec
Confidence 4567899999999988877789999999988887766544
No 189
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.38 E-value=28 Score=31.85 Aligned_cols=38 Identities=8% Similarity=-0.018 Sum_probs=32.4
Q ss_pred EEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 313 i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
+..||+|+++|.+...+.|.++|+.++...++..+...
T Consensus 86 ~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 123 (396)
T 3c5m_A 86 GFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEE 123 (396)
T ss_dssp CEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT
T ss_pred ceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccc
Confidence 67899999888887778999999999998888876544
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=64.18 E-value=21 Score=37.07 Aligned_cols=36 Identities=14% Similarity=0.103 Sum_probs=29.2
Q ss_pred eeeEEEECCCCCEEEE-EcCCC----cEEEEEcCcceeEee
Q 015021 309 KGERLTLSPSGSLAAI-TDSLG----RILLLDTQALVVVRL 344 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~-tD~lG----RV~L~D~~~~~vvrm 344 (414)
....++.||+|+++|. .|..| .|.++|+.+|..++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD 166 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc
Confidence 4678999999987776 45555 799999999998874
No 191
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=63.87 E-value=24 Score=36.79 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=35.2
Q ss_pred ceeeEEEECCCCCEEEE-EcCCC----cEEEEEcCcceeEee-ecccccceeeEE
Q 015021 308 RKGERLTLSPSGSLAAI-TDSLG----RILLLDTQALVVVRL-WKGYRDASCVFM 356 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~-tD~lG----RV~L~D~~~~~vvrm-wKGyRdAq~~wi 356 (414)
.....+++||||+++|. .|..| .|.++|+.+|..++. .++.+.....|.
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws 183 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL 183 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE
T ss_pred EEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe
Confidence 35667899999987775 57666 499999999997763 444444455564
No 192
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=62.58 E-value=11 Score=39.87 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=35.7
Q ss_pred CcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 329 GRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 329 GRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
|.|..||+.+|.++-..+..-. |.-.... . . . -||+++-.+|.|.+|+.++|+.+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~----~~~g~~~----------t--a-g---glvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTI----FNGGTLS----------T--A-G---NLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSS----CCCCEEE----------E--T-T---TEEEEECTTSEEEEEETTTCCEE
T ss_pred eeEEEEECCCCCeEeEccCCCC----ccCccce----------E--C-C---CEEEEECCCCcEEEEECCCCccc
Confidence 8899999999998633332110 1000000 0 0 0 16777888999999999999987
No 193
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=62.37 E-value=15 Score=36.20 Aligned_cols=73 Identities=5% Similarity=-0.114 Sum_probs=46.2
Q ss_pred EEECCCCCEEEEEcC---------CCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEE
Q 015021 313 LTLSPSGSLAAITDS---------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLA 383 (414)
Q Consensus 313 i~~sP~~~laa~tD~---------lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~Lv 383 (414)
+.++|+|+.+-++.. .+.+.+||+.++.+++-++.-.. .|--.. ..+ + ..+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~---p~gi~~--s~D---------g---~~l--- 328 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHD---SDAIIA--AQD---------G---ASD--- 328 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEE---ECEEEE--CCS---------S---SCE---
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCC---cceEEE--CCC---------C---CEE---
Confidence 789999975555432 24788999999999997754331 111111 010 1 111
Q ss_pred EEcCC--CCeEEEeeCCCCcceee
Q 015021 384 IHAPR--KGIIEHLAGMADENWTT 405 (414)
Q Consensus 384 Iyapr--Rg~lEvW~~~~g~~v~~ 405 (414)
+|+.+ .+.|-|+|+++++.+.+
T Consensus 329 ~va~~~~~~~VsVID~~t~kvv~~ 352 (368)
T 1mda_H 329 NYANSAGTEVLDIYDAASDQDQSS 352 (368)
T ss_dssp EEEEETTTTEEEEEESSSCEEEEE
T ss_pred EEEccCCCCeEEEEECCCCcEEEE
Confidence 23343 79999999999998855
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=62.26 E-value=8.7 Score=37.38 Aligned_cols=39 Identities=8% Similarity=-0.042 Sum_probs=32.7
Q ss_pred CceeeEEEECCCCC-EEEEEc-CCCcEEEEEcCcceeEeee
Q 015021 307 PRKGERLTLSPSGS-LAAITD-SLGRILLLDTQALVVVRLW 345 (414)
Q Consensus 307 ~R~~~~i~~sP~~~-laa~tD-~lGRV~L~D~~~~~vvrmw 345 (414)
......|.++|+|+ ++.++. ..+.|.+||+.++.+++-.
T Consensus 317 g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 317 GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 34578999999998 777776 5899999999999999763
No 195
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=61.79 E-value=20 Score=37.21 Aligned_cols=35 Identities=11% Similarity=-0.008 Sum_probs=27.9
Q ss_pred ceeeEEEECCCCCEEEE-EcCCC----cEEEEEcCcceeE
Q 015021 308 RKGERLTLSPSGSLAAI-TDSLG----RILLLDTQALVVV 342 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~-tD~lG----RV~L~D~~~~~vv 342 (414)
.....+..||||+++|. .|..| .|.++|+.+|..+
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence 35778999999987775 45454 6999999999876
No 196
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=61.43 E-value=8.3 Score=39.92 Aligned_cols=76 Identities=9% Similarity=0.087 Sum_probs=52.7
Q ss_pred CeeeeccCcceeeeeecceEEE--EeecCCCCCc------eeecc-cCCC---CCCCeEEEEEeEEe-CCcEEEEEeccc
Q 015021 33 PNLLCALDMHTIALANRYQTVI--INWADPEGLV------AKIRP-ELSP---IASEYITAIEWLVF-EEMRALAVGTSR 99 (414)
Q Consensus 33 ~~~~~sp~~~~la~A~~~~~v~--~~w~~~~~~~------v~~~g-~l~~---~~~e~ITs~~~lpl-~dw~~I~VG~ss 99 (414)
..+.+||+|++||+.-..-+.| ++|....... +..+- .|++ .....|..+.|=|+ ....|+||=|++
T Consensus 69 ~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD 148 (452)
T 3pbp_A 69 FHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKED 148 (452)
T ss_dssp CEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETT
T ss_pred eEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecC
Confidence 5799999999999887775555 6775543221 11111 1111 11366999999999 445799999999
Q ss_pred cEEEEEecC
Q 015021 100 GYFLVYDLK 108 (414)
Q Consensus 100 G~vrfyte~ 108 (414)
+-||+|+.+
T Consensus 149 ~~Ir~yDl~ 157 (452)
T 3pbp_A 149 DTITMFDIL 157 (452)
T ss_dssp SCEEEEETT
T ss_pred CEEEEEEcc
Confidence 999999974
No 197
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=58.20 E-value=14 Score=36.39 Aligned_cols=41 Identities=5% Similarity=-0.056 Sum_probs=33.7
Q ss_pred eeeEEEECCCCC-EEEEEc-CCCcEEEEEcCcceeEeeecccc
Q 015021 309 KGERLTLSPSGS-LAAITD-SLGRILLLDTQALVVVRLWKGYR 349 (414)
Q Consensus 309 ~~~~i~~sP~~~-laa~tD-~lGRV~L~D~~~~~vvrmwKGyR 349 (414)
....|.++|+|+ ++++.. ..+.|.+||+.++.+++-.+.-+
T Consensus 315 ~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~ 357 (368)
T 1mda_H 315 DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDK 357 (368)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCS
T ss_pred CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCC
Confidence 578899999997 555555 58999999999999998876443
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=57.83 E-value=13 Score=37.19 Aligned_cols=39 Identities=10% Similarity=0.058 Sum_probs=32.4
Q ss_pred ceeeEEEECCCCC-EEEEE-cCCCcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGS-LAAIT-DSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~-laa~t-D~lGRV~L~D~~~~~vvrmwK 346 (414)
+...+|.++|+++ ++.++ -..|.|.+||+.++.+++-+|
T Consensus 331 ~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 331 HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 4567899999996 55555 558999999999999999875
No 199
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=57.28 E-value=12 Score=37.81 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=33.8
Q ss_pred ceeeEEEECCCCC-EEEEEc-CCCcEEEEEcCcceeEeee
Q 015021 308 RKGERLTLSPSGS-LAAITD-SLGRILLLDTQALVVVRLW 345 (414)
Q Consensus 308 R~~~~i~~sP~~~-laa~tD-~lGRV~L~D~~~~~vvrmw 345 (414)
+....|.++|+|+ ++.++. ..|.|.+||+.++.+++-+
T Consensus 370 ~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 370 HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 4688899999998 888887 6899999999999999876
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=57.02 E-value=87 Score=27.17 Aligned_cols=38 Identities=11% Similarity=0.059 Sum_probs=30.2
Q ss_pred CCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEee
Q 015021 306 HPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 344 (414)
Q Consensus 306 ~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrm 344 (414)
.......|+.+|+|++.+++...|+|..+|.. +.+.+.
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~ 50 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEY 50 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe
Confidence 33567889999999988877778999999998 665543
No 201
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=56.76 E-value=81 Score=28.38 Aligned_cols=39 Identities=10% Similarity=0.129 Sum_probs=29.6
Q ss_pred ceeeEEEECCCCCEEEEEcC------CCcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGSLAAITDS------LGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~------lGRV~L~D~~~~~vvrmwK 346 (414)
.....|+++|+|++.+++.. .++|+.+|..++.+.++..
T Consensus 135 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 179 (333)
T 2dg1_A 135 YCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQ 179 (333)
T ss_dssp CCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEE
T ss_pred CcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeec
Confidence 45678999999987776543 5899999998877766544
No 202
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=56.50 E-value=43 Score=29.06 Aligned_cols=36 Identities=6% Similarity=0.067 Sum_probs=28.5
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEe
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR 343 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvr 343 (414)
.....|+++|+|++.++....++|..+|..+.....
T Consensus 192 ~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 192 TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred CCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence 345679999999888877778999999998765443
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=55.88 E-value=70 Score=29.62 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=45.6
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCC
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPR 388 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyapr 388 (414)
..+.|+++ .+++.+++...|+|.++|..++.+++-+++-.+ ..-+-+..+ . .|.+-...
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~--p~~i~~~~~---------------g---~lyv~~~~ 103 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTS--PRYIHFLSD---------------E---KAYVTQIW 103 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSS--EEEEEEEET---------------T---EEEEEEBS
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCC--CcEEEEeCC---------------C---eEEEEECC
Confidence 34567774 356666666779999999999999887764322 222222111 1 13333334
Q ss_pred CCeEEEeeCCCCcce
Q 015021 389 KGIIEHLAGMADENW 403 (414)
Q Consensus 389 Rg~lEvW~~~~g~~v 403 (414)
.+.|-+|+.++++.+
T Consensus 104 ~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 104 DYRIFIINPKTYEIT 118 (328)
T ss_dssp CSEEEEEETTTTEEE
T ss_pred CCeEEEEECCCCeEE
Confidence 678888888877655
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=55.62 E-value=26 Score=35.42 Aligned_cols=76 Identities=4% Similarity=-0.051 Sum_probs=48.2
Q ss_pred EEEECCCCCEEEEEcC----------CCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEE
Q 015021 312 RLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLC 381 (414)
Q Consensus 312 ~i~~sP~~~laa~tD~----------lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~ 381 (414)
.+.++|+++.+-+++. .+.|.+||+.++.+++-++.=+. .|--... .+ + ++ .
T Consensus 323 ~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~---P~gia~s--pD---------g--~~--~ 384 (426)
T 3c75_H 323 QTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE---IDSINVS--QD---------A--EP--L 384 (426)
T ss_dssp CEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE---ECEEEEC--CS---------S--SC--E
T ss_pred eeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC---cCeEEEc--cC---------C--CE--E
Confidence 4789999865555432 35799999999999998753221 1111110 10 1 11 2
Q ss_pred EEEEcCCCCeEEEeeCCCCcceee
Q 015021 382 LAIHAPRKGIIEHLAGMADENWTT 405 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~~v~~ 405 (414)
|++---..+.|-|+|+.+++.+.+
T Consensus 385 lyv~n~~s~~VsVID~~t~kvv~t 408 (426)
T 3c75_H 385 LYALSAGTQTLHIYDAATGEELRS 408 (426)
T ss_dssp EEEEETTTTEEEEEETTTCCEEEE
T ss_pred EEEEcCCCCeEEEEECCCCCEEEE
Confidence 334333479999999999998865
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=55.47 E-value=97 Score=26.87 Aligned_cols=40 Identities=18% Similarity=0.051 Sum_probs=31.7
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEe
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVR 343 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvr 343 (414)
++........|+++|+|++.++....|+|..+|.. +.+.+
T Consensus 15 ~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~ 54 (300)
T 2qc5_A 15 LSIPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE 54 (300)
T ss_dssp CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE
T ss_pred cCCCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE
Confidence 34445567889999999988887788999999988 66654
No 206
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=54.68 E-value=82 Score=28.80 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=35.8
Q ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccc--ccceeeEEEEEec
Q 015021 312 RLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY--RDASCVFMEMLVN 361 (414)
Q Consensus 312 ~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGy--RdAq~~wi~~~~~ 361 (414)
.+.+.|+|+++++....+||+.+|..+|.++.-+... ...++.|+.....
T Consensus 169 ~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~ 220 (276)
T 3no2_A 169 SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFP 220 (276)
T ss_dssp EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceE
Confidence 3677899988877666789999999999998777522 2334566654433
No 207
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=54.42 E-value=20 Score=37.56 Aligned_cols=39 Identities=8% Similarity=-0.118 Sum_probs=33.6
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccccc
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
..++.-+|+|++++.. .|.|.++|+.++....+.+|...
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~ 57 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF 57 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh
Confidence 4478899999988886 79999999999999888888764
No 208
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=54.41 E-value=15 Score=33.49 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=34.3
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeeccc
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGY 348 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGy 348 (414)
.....++++|+|++-+++-..|+|..+|..+|.+++..+.-
T Consensus 199 ~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 199 QIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp CEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 34567999999997777767799999999999999888754
No 209
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=53.46 E-value=25 Score=36.61 Aligned_cols=47 Identities=13% Similarity=0.212 Sum_probs=40.1
Q ss_pred ccCCCceeeEEEECCCCCEEEEE-----cCCCcEEEEEcCcceeEeeecccc
Q 015021 303 LKDHPRKGERLTLSPSGSLAAIT-----DSLGRILLLDTQALVVVRLWKGYR 349 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~t-----D~lGRV~L~D~~~~~vvrmwKGyR 349 (414)
|++..+....+..+|+|+++-++ |..+.|.++|..++.+++.-|+-|
T Consensus 498 ~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~~ 549 (567)
T 1qks_A 498 ITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKDER 549 (567)
T ss_dssp CCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCTT
T ss_pred cCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCCCc
Confidence 55677888999999999877766 357999999999999999998865
No 210
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=52.43 E-value=21 Score=37.65 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=21.3
Q ss_pred EEEEeccccEEEEEe-cCCcEEeecccC
Q 015021 92 ALAVGTSRGYFLVYD-LKGDLVHRQLIH 118 (414)
Q Consensus 92 ~I~VG~ssG~vrfyt-e~G~LL~sQ~lh 118 (414)
.|.+|+.+|.|..++ ++|+++-+...+
T Consensus 130 ~v~v~~~dg~l~alD~~tG~~~W~~~~~ 157 (677)
T 1kb0_A 130 KVYVGAWDGRLIALDAATGKEVWHQNTF 157 (677)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEETT
T ss_pred EEEEEcCCCEEEEEECCCCCEEeeecCC
Confidence 567788889999888 589888877655
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=51.60 E-value=72 Score=28.87 Aligned_cols=32 Identities=19% Similarity=0.039 Sum_probs=24.6
Q ss_pred eeEEEECCCCCEEEEEcC-CCcEEEEEc--Cccee
Q 015021 310 GERLTLSPSGSLAAITDS-LGRILLLDT--QALVV 341 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~-lGRV~L~D~--~~~~v 341 (414)
...|+++|+|+.+.++|+ .++|..+|+ .+|.+
T Consensus 151 pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 151 SNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQI 185 (297)
T ss_dssp EEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCE
T ss_pred ccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcc
Confidence 457999999987766665 589999997 56654
No 212
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=50.77 E-value=22 Score=38.85 Aligned_cols=47 Identities=9% Similarity=0.041 Sum_probs=34.6
Q ss_pred ccCCCceeeEEEECCCCCEEEEE------cCCCcEEEEEcCcceeEeeeccccc
Q 015021 303 LKDHPRKGERLTLSPSGSLAAIT------DSLGRILLLDTQALVVVRLWKGYRD 350 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~t------D~lGRV~L~D~~~~~vvrmwKGyRd 350 (414)
|..+......++.||||+++|.+ +..++|.++|+.++.+. ...++.+
T Consensus 48 lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~~-~lt~~~~ 100 (1045)
T 1k32_A 48 IVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK-RITYFSG 100 (1045)
T ss_dssp EECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE-ECCCCCE
T ss_pred eeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCeE-EcccCCC
Confidence 44566778899999999877765 23458999999999854 4455543
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=50.64 E-value=60 Score=28.70 Aligned_cols=37 Identities=14% Similarity=0.098 Sum_probs=27.4
Q ss_pred eeeEEEECCCCCEEEEEcCC---------------CcEEEEEcCcceeEeeec
Q 015021 309 KGERLTLSPSGSLAAITDSL---------------GRILLLDTQALVVVRLWK 346 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~l---------------GRV~L~D~~~~~vvrmwK 346 (414)
....|+++|+|++.+++... |+|+.+|.. +.+.++..
T Consensus 118 ~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp CCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 35678999999877766443 799999987 76665544
No 214
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=46.03 E-value=24 Score=33.77 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=36.6
Q ss_pred CCCEEEEEcCCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeC
Q 015021 318 SGSLAAITDSLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAG 397 (414)
Q Consensus 318 ~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~ 397 (414)
++..+.++...|.|..+|..+|.++.-.++ +. +. + .+.-.+.. +++-...+|.|-.|+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~----~~---------s----~p~~~~g~--~~v~~s~dg~l~a~d~ 66 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP----VL---------Q----VPTHVEEP--AFLPDPNDGSLYTLGS 66 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CC----SC---------C----CC-----C--CEEECTTTCCEEEC--
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CC----ce---------e----cceEcCCC--EEEEeCCCCEEEEEEC
Confidence 456677777889999999999998755544 10 00 0 00000011 2334578999999999
Q ss_pred CCCcce
Q 015021 398 MADENW 403 (414)
Q Consensus 398 ~~g~~v 403 (414)
++|+.+
T Consensus 67 ~tG~~~ 72 (369)
T 2hz6_A 67 KNNEGL 72 (369)
T ss_dssp ---CCS
T ss_pred CCCcee
Confidence 999864
No 215
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=44.96 E-value=57 Score=30.79 Aligned_cols=34 Identities=12% Similarity=0.237 Sum_probs=29.4
Q ss_pred EEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec
Q 015021 313 LTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 313 i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK 346 (414)
..++|+|+.+.++|.-++|..+|..+..+++-.+
T Consensus 110 ~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 110 WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 4477889877788999999999999999998776
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=44.45 E-value=1.2e+02 Score=31.58 Aligned_cols=45 Identities=20% Similarity=0.294 Sum_probs=31.2
Q ss_pred cCCCceeeEEEECCCCCEEEEEcC-----CCcEEEEEcCcc--e-eEeeeccc
Q 015021 304 KDHPRKGERLTLSPSGSLAAITDS-----LGRILLLDTQAL--V-VVRLWKGY 348 (414)
Q Consensus 304 ~D~~R~~~~i~~sP~~~laa~tD~-----lGRV~L~D~~~~--~-vvrmwKGy 348 (414)
.|.++....+..||+|++++.+-+ ...|.++|+.++ . ..++..+.
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~ 316 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDL 316 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSS
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCC
Confidence 344445678999999987776432 348999999987 5 55555443
No 217
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=43.90 E-value=21 Score=36.04 Aligned_cols=67 Identities=16% Similarity=0.139 Sum_probs=48.3
Q ss_pred EEEEEeccccEEEEEe-cCCcEEeecccCccceeEEEEecccCCCCCCCCCCeEEEEeCCe-E--EEEeChhHHHHHHHH
Q 015021 91 RALAVGTSRGYFLVYD-LKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGV-L--ARFDGSEIQKMLQRW 166 (414)
Q Consensus 91 ~~I~VG~ssG~vrfyt-e~G~LL~sQ~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~-i--v~IdG~sL~~~Lr~c 166 (414)
-+|-+=|..||+.+|+ |+|.+|++.++..++|.--.-.. ...-++.+=..+ | +.||...|-+=+.+.
T Consensus 272 gviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~---------~~~Gi~~Vnr~GqVl~v~v~~~~ivpyi~~~ 342 (365)
T 2xzh_A 272 DVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHE---------ATAGIIGVNRKGQVLSVCVEEENIIPYITNV 342 (365)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEG---------GGTEEEEEETTCEEEEEEECTTTHHHHHHHT
T ss_pred CEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccC---------CCCcEEEEcCCCEEEEEEECcccEehhhhhc
Confidence 4566779999999999 89999999999999996433111 123355554444 3 778888888777654
No 218
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=43.13 E-value=79 Score=32.99 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=48.0
Q ss_pred CeEEEEEeEEeCCcEEEEEeccccEEEEEecCCc----EEee--cccC-cccee-EEEEecccCCCCCCCCCCeEEEEeC
Q 015021 77 EYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGD----LVHR--QLIH-PGRIL-KLRVRGSRRDLTQDTAEEEVCVVMP 148 (414)
Q Consensus 77 e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~----LL~s--Q~lh-~~pV~-~ik~r~~~~~~~~~~~~eel~Ily~ 148 (414)
.+.|+|....-.+.+++-+||++|.|.=....+. .++. |.+. ..||. .+.+- ...+.|+|...
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~---------~~~~~Lyv~s~ 470 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFS---------INQLYLYVMSE 470 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEEC---------TTSSEEEEECS
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEc---------cCCCeEEEEec
Confidence 4688887777788999999999999876553221 2333 2333 45665 44421 12677999999
Q ss_pred CeEEEEeC
Q 015021 149 GVLARFDG 156 (414)
Q Consensus 149 ~~iv~IdG 156 (414)
+.|+.|.-
T Consensus 471 ~~V~kvpl 478 (539)
T 3al9_A 471 RQVTRVPV 478 (539)
T ss_dssp SEEEEEES
T ss_pred cccceeeh
Confidence 99988763
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=42.97 E-value=41 Score=32.82 Aligned_cols=41 Identities=12% Similarity=0.126 Sum_probs=33.9
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecccc
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKGYR 349 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKGyR 349 (414)
.-..|+++|+|++.++-...+||..+|..++.+.++..+..
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~ 172 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK 172 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC
Confidence 45679999999977776667999999999999988877743
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=41.54 E-value=1.4e+02 Score=27.38 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=23.5
Q ss_pred eeEEEECCCCCEEEEEcC-CCcEEEEEcC--cc
Q 015021 310 GERLTLSPSGSLAAITDS-LGRILLLDTQ--AL 339 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~-lGRV~L~D~~--~~ 339 (414)
...|+++|+|+.+.++|+ .++|.++|+. +|
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 347899999987666654 5899999986 66
No 221
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=40.63 E-value=1.4e+02 Score=26.24 Aligned_cols=39 Identities=5% Similarity=-0.018 Sum_probs=31.1
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwK 346 (414)
.....|+++|+|++.+++-..|+|..+|..++..++...
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~ 264 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIR 264 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEe
Confidence 345569999999988877677899999999887766554
No 222
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=40.40 E-value=99 Score=31.90 Aligned_cols=46 Identities=17% Similarity=0.044 Sum_probs=33.2
Q ss_pred ccCCCceeeEEEECCCCCEEEEEcCCC----cEEEEEcCcceeEeeeccc
Q 015021 303 LKDHPRKGERLTLSPSGSLAAITDSLG----RILLLDTQALVVVRLWKGY 348 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~~laa~tD~lG----RV~L~D~~~~~vvrmwKGy 348 (414)
..|.......+..||+|++++.+-+.+ +|.++|..++...++-.+.
T Consensus 222 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 271 (695)
T 2bkl_A 222 RTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGV 271 (695)
T ss_dssp CCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECS
T ss_pred cCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCC
Confidence 445556677899999998777654444 8999998887776666544
No 223
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=40.28 E-value=1e+02 Score=26.62 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=26.7
Q ss_pred eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEe
Q 015021 310 GERLTLSPSGSLAAITDSLGRILLLDTQALVVVR 343 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvr 343 (414)
...|+++|+|++.++....++|..+|..++....
T Consensus 152 p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 152 PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVV 185 (270)
T ss_dssp CCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEE
T ss_pred ceeEEEeCCCCEEEEECCCCEEEEEecCCCceEe
Confidence 3568999999977766667899999998876544
No 224
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=39.16 E-value=1.9e+02 Score=24.95 Aligned_cols=36 Identities=11% Similarity=0.014 Sum_probs=27.8
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEee
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 344 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrm 344 (414)
.....|+++|+|++.+++...++|..+|. ++.+.+.
T Consensus 141 ~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 141 SYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF 176 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE
T ss_pred CCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe
Confidence 45678899999987777666789999998 7766553
No 225
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=39.13 E-value=36 Score=35.61 Aligned_cols=36 Identities=14% Similarity=0.058 Sum_probs=28.9
Q ss_pred eeeEEEECCCCCEEEE-EcCCCc----EEEEEcCcceeEee
Q 015021 309 KGERLTLSPSGSLAAI-TDSLGR----ILLLDTQALVVVRL 344 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~-tD~lGR----V~L~D~~~~~vvrm 344 (414)
....+..||||+++|. .|..|. |.++|+.+|..++.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~ 204 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD 204 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc
Confidence 5668999999987666 565565 99999999998774
No 226
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=38.93 E-value=32 Score=32.15 Aligned_cols=38 Identities=18% Similarity=0.276 Sum_probs=32.1
Q ss_pred eeEEEECCCCCEEEEEcC----CCcEEEEEcCcceeEeeecc
Q 015021 310 GERLTLSPSGSLAAITDS----LGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~----lGRV~L~D~~~~~vvrmwKG 347 (414)
...|+++|++..+-++|. .++|+++|+.++.+.|+..|
T Consensus 122 ~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~ 163 (343)
T 2qe8_A 122 VNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQG 163 (343)
T ss_dssp CCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTT
T ss_pred cceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecC
Confidence 367899998777777886 68999999999999998866
No 227
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=37.96 E-value=2.1e+02 Score=25.11 Aligned_cols=39 Identities=15% Similarity=0.038 Sum_probs=27.7
Q ss_pred ceeeEEEECCCCCEEEEEcC-CCcEEEEEcCcceeEeeec
Q 015021 308 RKGERLTLSPSGSLAAITDS-LGRILLLDTQALVVVRLWK 346 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~-lGRV~L~D~~~~~vvrmwK 346 (414)
..-..|+++|+++.+-++|. .++|..+|...+....+..
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~ 206 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE 206 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec
Confidence 34567999998876666654 4799999998765544433
No 228
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=35.32 E-value=60 Score=31.65 Aligned_cols=33 Identities=3% Similarity=-0.156 Sum_probs=26.6
Q ss_pred EEECCCCCEEEEEcCCC--cEEEEEcCcceeEeee
Q 015021 313 LTLSPSGSLAAITDSLG--RILLLDTQALVVVRLW 345 (414)
Q Consensus 313 i~~sP~~~laa~tD~lG--RV~L~D~~~~~vvrmw 345 (414)
++++|+|+++.++|..| +|+.+|...+...+..
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~ 210 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRI 210 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEe
Confidence 89999999888887766 8999999877665443
No 229
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=34.70 E-value=2.3e+02 Score=29.14 Aligned_cols=32 Identities=22% Similarity=0.270 Sum_probs=24.5
Q ss_pred CceeeEEEECCCCCEEEEEc--C---CCcEEEEEcCc
Q 015021 307 PRKGERLTLSPSGSLAAITD--S---LGRILLLDTQA 338 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD--~---lGRV~L~D~~~ 338 (414)
......+..||+|++++.+- + ...|.++|+.+
T Consensus 232 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 232 PKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp TTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred CeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 34456789999998777642 2 56899999987
No 230
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=33.96 E-value=35 Score=35.66 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=49.3
Q ss_pred cEEEEEeccccEEEEEe-cCCcEEeecccCccceeEEEEecccCCCCCCCCCCeEEEEeCCe-E--EEEeChhHHHHHHH
Q 015021 90 MRALAVGTSRGYFLVYD-LKGDLVHRQLIHPGRILKLRVRGSRRDLTQDTAEEEVCVVMPGV-L--ARFDGSEIQKMLQR 165 (414)
Q Consensus 90 w~~I~VG~ssG~vrfyt-e~G~LL~sQ~lh~~pV~~ik~r~~~~~~~~~~~~eel~Ily~~~-i--v~IdG~sL~~~Lr~ 165 (414)
.-+|-+=|..||+.+|+ |+|.+||+.+++.++|.--.-. ....-++.+=..+ | +.||-..|-+-+.+
T Consensus 270 ygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~---------~~~~Gi~~Vnr~GqVl~v~v~e~~ivpyi~~ 340 (494)
T 1bpo_A 270 HDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPH---------EATAGIIGVNRKGQVLSVCVEEENIIPYITN 340 (494)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE---------TTTTEEEEEETTCEEEEEEECTTTHHHHHHH
T ss_pred CCEEEEEecCceEEEEecccceeeeeecccCCceEEeccc---------CCCCcEEEEccCceEEEEEEccccchhhhhh
Confidence 34566779999999999 8999999999999999753211 1133355554544 3 78899888877765
Q ss_pred H
Q 015021 166 W 166 (414)
Q Consensus 166 c 166 (414)
.
T Consensus 341 ~ 341 (494)
T 1bpo_A 341 V 341 (494)
T ss_dssp T
T ss_pred c
Confidence 4
No 231
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=33.10 E-value=1.3e+02 Score=31.75 Aligned_cols=47 Identities=19% Similarity=0.195 Sum_probs=39.7
Q ss_pred eeEEEECCCCCEEEEEcCCC------------cEEEEEcCcceeEeeecccccceeeEE
Q 015021 310 GERLTLSPSGSLAAITDSLG------------RILLLDTQALVVVRLWKGYRDASCVFM 356 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lG------------RV~L~D~~~~~vvrmwKGyRdAq~~wi 356 (414)
-..|+++|+|+|..++|..+ .++..|..+|.+-|...|-.+|++.=+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~ 536 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGI 536 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCe
Confidence 47799999999999999742 588899999999999999888876533
No 232
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=32.77 E-value=2.4e+02 Score=24.27 Aligned_cols=34 Identities=18% Similarity=0.048 Sum_probs=26.9
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeE
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVV 342 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vv 342 (414)
.....|+++|+|++.++....|+|..+|.. +.+.
T Consensus 62 ~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 62 AKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE
T ss_pred CcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE
Confidence 345688899999887777778999999988 6654
No 233
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=32.51 E-value=92 Score=32.05 Aligned_cols=26 Identities=15% Similarity=0.266 Sum_probs=20.9
Q ss_pred EEEEeccccEEEEEe-cCCcEEeeccc
Q 015021 92 ALAVGTSRGYFLVYD-LKGDLVHRQLI 117 (414)
Q Consensus 92 ~I~VG~ssG~vrfyt-e~G~LL~sQ~l 117 (414)
.|.+|+.+|.|..++ ++|+++-+..+
T Consensus 117 ~v~v~~~dg~l~alD~~tG~~~W~~~~ 143 (571)
T 2ad6_A 117 QIVKKQANGHLLALDAKTGKINWEVEV 143 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEeCCCEEEEEECCCCCEEEEecC
Confidence 467788899999999 68999887654
No 234
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=31.78 E-value=63 Score=29.29 Aligned_cols=36 Identities=11% Similarity=-0.073 Sum_probs=28.8
Q ss_pred ceeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEee
Q 015021 308 RKGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRL 344 (414)
Q Consensus 308 R~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrm 344 (414)
.....++++|+|++.+++...++|.++|.. |.+..+
T Consensus 86 ~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 86 AFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp SCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 446789999999988888778999999986 665444
No 235
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=28.20 E-value=1e+02 Score=27.78 Aligned_cols=36 Identities=14% Similarity=0.135 Sum_probs=27.0
Q ss_pred eeEEEECCCCCEEEEEc-C--------------------------CCcEEEEEcCcceeEeee
Q 015021 310 GERLTLSPSGSLAAITD-S--------------------------LGRILLLDTQALVVVRLW 345 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD-~--------------------------lGRV~L~D~~~~~vvrmw 345 (414)
...+..||+|+.++.+. . ..+|.++|+.++..++..
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF 168 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee
Confidence 77899999998666542 1 368999999999874433
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=27.73 E-value=2.8e+02 Score=29.09 Aligned_cols=22 Identities=18% Similarity=0.351 Sum_probs=20.0
Q ss_pred EEEEcCCCCeEEEeeCCCCcce
Q 015021 382 LAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~~v 403 (414)
+++++.+.|.|-+++.++|+.+
T Consensus 321 ~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 321 VLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEECCTTSEEEEEETTTCCEE
T ss_pred EEEEECCCCeEEEEECCCCCEe
Confidence 5678899999999999999987
No 237
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=27.10 E-value=79 Score=32.74 Aligned_cols=57 Identities=12% Similarity=0.090 Sum_probs=35.6
Q ss_pred CCCcEEEEEcCcceeEeeecccccceeeEEEEEecccccccccccCCCCCcceEEEEEEcCCCCeEEEeeCCCCcce
Q 015021 327 SLGRILLLDTQALVVVRLWKGYRDASCVFMEMLVNKDAATSSAYYAPVKSDYCLCLAIHAPRKGIIEHLAGMADENW 403 (414)
Q Consensus 327 ~lGRV~L~D~~~~~vvrmwKGyRdAq~~wi~~~~~~~~~~~~~~~~~~k~~~~l~LvIyaprRg~lEvW~~~~g~~v 403 (414)
..|+|.-||+.+|.++-..+- ..+.. ..+..... -||+++-.+|.|..++.++|+.+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~-------------~~~~~-----~g~~~tag--glvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKE-------------HLPLW-----AGVLATAG--NLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEE-------------SSCCC-----SCCEEETT--TEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCCCEEEEecC-------------CCCCc-----ccceEeCC--CEEEEECCCCcEEEEECCCCCEE
Confidence 468999999999987622211 00000 00000000 16677889999999999999987
No 238
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=26.10 E-value=91 Score=30.98 Aligned_cols=48 Identities=13% Similarity=0.120 Sum_probs=33.0
Q ss_pred CeEEEEEeEEeCCcEEEEEeccccEEEEEecCCcEEee------------cccCccceeEEEEe
Q 015021 77 EYITAIEWLVFEEMRALAVGTSRGYFLVYDLKGDLVHR------------QLIHPGRILKLRVR 128 (414)
Q Consensus 77 e~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G~LL~s------------Q~lh~~pV~~ik~r 128 (414)
+.|||++|=|=. +++|..+|.++.|+..|..+-+ +.-|+-.|.+|+.-
T Consensus 163 ~~Vs~v~WSpkG----~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl 222 (388)
T 1xip_A 163 QNVTSFDVTNSQ----LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTIL 222 (388)
T ss_dssp ESEEEEEECSSE----EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEES
T ss_pred CCceEEEEcCCc----eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEe
Confidence 467777776653 6789999999999977766521 11256677777743
No 239
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=25.75 E-value=3e+02 Score=28.48 Aligned_cols=45 Identities=13% Similarity=0.110 Sum_probs=30.3
Q ss_pred CceeeEEEECCCCCEEEEEcC----CCcEEEEEcCcc--eeEeeecccccce
Q 015021 307 PRKGERLTLSPSGSLAAITDS----LGRILLLDTQAL--VVVRLWKGYRDAS 352 (414)
Q Consensus 307 ~R~~~~i~~sP~~~laa~tD~----lGRV~L~D~~~~--~vvrmwKGyRdAq 352 (414)
+.....+..||+|++++++-+ -..|.++|+.++ ...++..+ .++.
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~-~~~~ 283 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGD-LDAD 283 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECS-SSSC
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCC-CCce
Confidence 344667899999987766422 248999999887 55555543 3443
No 240
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=25.68 E-value=1.6e+02 Score=33.45 Aligned_cols=79 Identities=8% Similarity=0.056 Sum_probs=46.7
Q ss_pred eeeeccCcceeeeeecceEEEEeecCCCCCceeecccCCCCCCCeEEEEEeEEeCC----cEEEEEecc-ccEEEEEec-
Q 015021 34 NLLCALDMHTIALANRYQTVIINWADPEGLVAKIRPELSPIASEYITAIEWLVFEE----MRALAVGTS-RGYFLVYDL- 107 (414)
Q Consensus 34 ~~~~sp~~~~la~A~~~~~v~~~w~~~~~~~v~~~g~l~~~~~e~ITs~~~lpl~d----w~~I~VG~s-sG~vrfyte- 107 (414)
+.+.|..+..+++|.+..++...-+. +++.-....+- ++.|+|+..-|.++ ..+++||+. ++.|++|+.
T Consensus 516 I~~As~n~~~vvva~g~~l~~fel~~---~~L~~~~~~~l--~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~ 590 (1158)
T 3ei3_A 516 ISVASCNSSQVVVAVGRALYYLQIHP---QELRQISHTEM--EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLP 590 (1158)
T ss_dssp CCEEEECSSEEEEEETTEEEEEEEET---TEEEEEEEEEC--SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETT
T ss_pred EEEEEeCCCEEEEEECCEEEEEEeeC---CceeeecccCC--CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECC
Confidence 34444555667777666555544332 12221111111 23488887766654 368999996 999999995
Q ss_pred CCcEEeeccc
Q 015021 108 KGDLVHRQLI 117 (414)
Q Consensus 108 ~G~LL~sQ~l 117 (414)
.-+.+..|.+
T Consensus 591 ~l~~~~~~~L 600 (1158)
T 3ei3_A 591 SFELLHKEML 600 (1158)
T ss_dssp TCCEEEEEEC
T ss_pred CCCeEEEEEC
Confidence 5555666665
No 241
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=25.56 E-value=61 Score=29.40 Aligned_cols=31 Identities=13% Similarity=0.092 Sum_probs=25.6
Q ss_pred eeEEEECCCCCEEEEEcCC------CcEEEEEcCcce
Q 015021 310 GERLTLSPSGSLAAITDSL------GRILLLDTQALV 340 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~l------GRV~L~D~~~~~ 340 (414)
...|+++|+|+++.++|+. ++|..+|+..+.
T Consensus 190 p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 190 PNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp EEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 3568999999988888876 799999998654
No 242
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=23.54 E-value=4.6e+02 Score=24.71 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=27.9
Q ss_pred eeEEEECCCCCEEEEEcCCC--cEEEEEcCcceeEeeec
Q 015021 310 GERLTLSPSGSLAAITDSLG--RILLLDTQALVVVRLWK 346 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~lG--RV~L~D~~~~~vvrmwK 346 (414)
.+-|..+ +++|-.++=..| +|..+|+.+|.+++-.+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~ 82 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE 82 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe
Confidence 4667777 678777764444 99999999999998764
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=23.35 E-value=3e+02 Score=26.22 Aligned_cols=44 Identities=14% Similarity=0.106 Sum_probs=32.7
Q ss_pred ccccCCCce-eeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeee
Q 015021 301 TCLKDHPRK-GERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLW 345 (414)
Q Consensus 301 ~~l~D~~R~-~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmw 345 (414)
..++-.++- .+-|..+ +++|-.++=..|+|..+|+.+|.+++-.
T Consensus 47 ~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~ 91 (268)
T 3nok_A 47 REYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME 91 (268)
T ss_dssp EEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE
T ss_pred EEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE
Confidence 345444444 3667777 4688888877889999999999999866
No 244
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=22.89 E-value=1.4e+02 Score=31.26 Aligned_cols=26 Identities=27% Similarity=0.388 Sum_probs=20.8
Q ss_pred EEEEeccccEEEEEe-cCCcEEeeccc
Q 015021 92 ALAVGTSRGYFLVYD-LKGDLVHRQLI 117 (414)
Q Consensus 92 ~I~VG~ssG~vrfyt-e~G~LL~sQ~l 117 (414)
.|.+|+.+|.|..++ ++|+++-+...
T Consensus 119 ~v~v~~~dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 119 KVYVGTLDGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEEcCCCEEEEEECCCCCEeeeecc
Confidence 467788889999998 68998877654
No 245
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=22.82 E-value=3.5e+02 Score=28.16 Aligned_cols=27 Identities=15% Similarity=0.092 Sum_probs=22.0
Q ss_pred EEEEeccccEEEEEe-cCCcEEeecccC
Q 015021 92 ALAVGTSRGYFLVYD-LKGDLVHRQLIH 118 (414)
Q Consensus 92 ~I~VG~ssG~vrfyt-e~G~LL~sQ~lh 118 (414)
.|.|++.+|.|..++ ++|++|-+....
T Consensus 68 ~vyv~~~~~~v~AlD~~tG~~~W~~~~~ 95 (668)
T 1kv9_A 68 VIYTSMSWSRVIAVDAASGKELWRYDPE 95 (668)
T ss_dssp EEEEEEGGGEEEEEETTTCCEEEEECCC
T ss_pred EEEEECCCCeEEEEECCCChhceEECCC
Confidence 566788899999999 699999886554
No 246
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=22.81 E-value=67 Score=36.58 Aligned_cols=34 Identities=21% Similarity=0.351 Sum_probs=28.4
Q ss_pred CCCeEEEEEeEEeCC--cEEEEEec----------cccEEEEEecC
Q 015021 75 ASEYITAIEWLVFEE--MRALAVGT----------SRGYFLVYDLK 108 (414)
Q Consensus 75 ~~e~ITs~~~lpl~d--w~~I~VG~----------ssG~vrfyte~ 108 (414)
++|.++|++.+.|.+ ..+++||| +.|++++|...
T Consensus 827 ~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 827 QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYS 872 (1158)
T ss_dssp TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEE
T ss_pred CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEE
Confidence 479999999999954 47999999 57999999864
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=22.80 E-value=3.8e+02 Score=27.95 Aligned_cols=23 Identities=22% Similarity=0.374 Sum_probs=20.6
Q ss_pred EEEEcCCCCeEEEeeCCCCccee
Q 015021 382 LAIHAPRKGIIEHLAGMADENWT 404 (414)
Q Consensus 382 LvIyaprRg~lEvW~~~~g~~v~ 404 (414)
+++++.+.|.|-+++.++|+.+.
T Consensus 329 ~l~~~~~~G~l~~lD~~tG~~l~ 351 (677)
T 1kb0_A 329 VILHAPKNGFFFVLDRTNGKFIS 351 (677)
T ss_dssp EEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEECCCCEEEEEECCCCCEec
Confidence 67888999999999999999873
No 248
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=22.25 E-value=1.4e+02 Score=27.57 Aligned_cols=38 Identities=11% Similarity=-0.044 Sum_probs=29.9
Q ss_pred eeeEEEECCCCCEEEEEcCCCcEEEEEcCcceeEeeecc
Q 015021 309 KGERLTLSPSGSLAAITDSLGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 309 ~~~~i~~sP~~~laa~tD~lGRV~L~D~~~~~vvrmwKG 347 (414)
....++++++|++.+++...|+|..+|. ++..++.++.
T Consensus 231 ~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~ 268 (326)
T 2ghs_A 231 GMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEV 268 (326)
T ss_dssp EEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEEC
T ss_pred CCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEEC
Confidence 3457999999998877766789999999 6777776653
No 249
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=22.11 E-value=2e+02 Score=30.99 Aligned_cols=71 Identities=14% Similarity=0.170 Sum_probs=46.5
Q ss_pred eEEEEEeEEeCCcEEEEEeccccEEEEEecCC----cEEeec--cc-Cccce-eEEEEecccCCCCCCCCCCeEEEEeCC
Q 015021 78 YITAIEWLVFEEMRALAVGTSRGYFLVYDLKG----DLVHRQ--LI-HPGRI-LKLRVRGSRRDLTQDTAEEEVCVVMPG 149 (414)
Q Consensus 78 ~ITs~~~lpl~dw~~I~VG~ssG~vrfyte~G----~LL~sQ--~l-h~~pV-~~ik~r~~~~~~~~~~~~eel~Ily~~ 149 (414)
+.|+|.-....+.+++-+||++|.|.=.-..+ ..++.+ .+ ...|| ..+.+- ...+.|+|....
T Consensus 400 ~lT~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~---------~~~~~Lyv~s~~ 470 (681)
T 3oky_A 400 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFS---------INQLYLYVMSER 470 (681)
T ss_dssp CBCCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEEC---------TTSSEEEEECSS
T ss_pred ceEEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEc---------CCCCEEEEEecC
Confidence 45666555557789999999999987544322 345553 34 34566 344432 125679999999
Q ss_pred eEEEEeCh
Q 015021 150 VLARFDGS 157 (414)
Q Consensus 150 ~iv~IdG~ 157 (414)
.|..+.-.
T Consensus 471 ~V~qvPl~ 478 (681)
T 3oky_A 471 QVTRVPVE 478 (681)
T ss_dssp EEEEEESC
T ss_pred EEEEEEhh
Confidence 99888753
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=21.70 E-value=1.6e+02 Score=26.77 Aligned_cols=37 Identities=5% Similarity=-0.028 Sum_probs=27.2
Q ss_pred eeEEEECCCCCEEEEEcC----------CCcEEEEEcCcceeEeeecc
Q 015021 310 GERLTLSPSGSLAAITDS----------LGRILLLDTQALVVVRLWKG 347 (414)
Q Consensus 310 ~~~i~~sP~~~laa~tD~----------lGRV~L~D~~~~~vvrmwKG 347 (414)
-..|+++|+|++-++.-. -++|+.+|.. |.+++.+..
T Consensus 231 P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~ 277 (322)
T 2fp8_A 231 PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPL 277 (322)
T ss_dssp EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEEC
T ss_pred CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEEC
Confidence 456899999986555433 5899999984 777777654
No 251
>2l1s_A Uncharacterized protein YOHN; PFAM PF11776, DUF3315, JCSG, structural genomics, PSI-biolog protein structure initiative; NMR {Klebsiella pneumoniae subsp}
Probab=21.49 E-value=85 Score=25.03 Aligned_cols=41 Identities=15% Similarity=0.351 Sum_probs=29.8
Q ss_pred ccCCCceeeEEEECCCC-CEEEEEcCCCcEEEEEcCcceeEeeeccc
Q 015021 303 LKDHPRKGERLTLSPSG-SLAAITDSLGRILLLDTQALVVVRLWKGY 348 (414)
Q Consensus 303 l~D~~R~~~~i~~sP~~-~laa~tD~lGRV~L~D~~~~~vvrmwKGy 348 (414)
+.|-++.. |-.=|.| +|+=+ .|..+|+++.+|.|+.+..|.
T Consensus 37 V~Dw~~~~--L~~PPrGy~Wvrv---~~dyvLVai~tG~I~~ii~g~ 78 (83)
T 2l1s_A 37 IKQWQQRN--LPAPDAGSHWTYM---GGNYVLITDTEGKILKVYDGE 78 (83)
T ss_dssp ECCCTTSS--CCCCCTTEEEEEC---SSEEEEEETTTCBEEEEEEGG
T ss_pred cCCHhHCC--CCccCCCCEEEEE---CCcEEEEECCCCeEEEEEecc
Confidence 55555543 3444566 67775 689999999999999998664
No 252
>3q7x_A De novo designed beta-trefoil architecture with S primary structure; beta-terfoil, de novo protein; 1.40A {Synthetic} PDB: 3q7w_A 3o4d_A 3q7y_A 3o4b_A 3o4c_A 3o4a_A* 3o49_A
Probab=20.78 E-value=3.1e+02 Score=23.02 Aligned_cols=56 Identities=20% Similarity=0.360 Sum_probs=36.6
Q ss_pred CCCceeeEEEECCCCCEEEEE-------------cCCCcEEEEEcCcceeEeeec-c------cccceeeEEEEEe
Q 015021 305 DHPRKGERLTLSPSGSLAAIT-------------DSLGRILLLDTQALVVVRLWK-G------YRDASCVFMEMLV 360 (414)
Q Consensus 305 D~~R~~~~i~~sP~~~laa~t-------------D~lGRV~L~D~~~~~vvrmwK-G------yRdAq~~wi~~~~ 360 (414)
-..|.+..|++.|+|+.-++. ...|.|.+.-+.++.-++|-+ | .++.+|.|+|...
T Consensus 11 ~~~~~g~~L~I~~dG~V~Gt~~~~~~~s~l~~~~v~~G~V~I~g~~sg~yL~m~~~G~v~Gs~~~s~ec~flE~~~ 86 (132)
T 3q7x_A 11 RSTETGQFLRINPDGTVDGTRDRSDPGIQFQISPEGNGEVLLRSTETGQFLRINPDGTVDGTRDRSDPGIQFQISP 86 (132)
T ss_dssp EETTTCCEEEECTTSBEEEECCTTCGGGCEEEEEEETTEEEEEETTTCCEEEECTTSBEEEECC-CCGGGCEEEEE
T ss_pred eeccCcEEEEECCCCcEEeecCCCCCCcEEEEEecccCEEEEEEEcccEEEEECCCCCEeeccCCCCCceeEEEEe
Confidence 345666677777776665553 356888888888888888874 4 2334566666543
No 253
>3nvn_B Plexin-C1; beta-propeller, signaling, viral protein-signaling protein C; HET: NDG NAG; 2.26A {Homo sapiens} PDB: 3nvq_B*
Probab=20.37 E-value=3.7e+02 Score=27.87 Aligned_cols=73 Identities=16% Similarity=0.089 Sum_probs=46.1
Q ss_pred CeEEEEEeEEeCCcEEEEEeccccEEE-EEe-cCCc----EEeecccCcccee-EEEEecccCCCCCCCCCCeEEEEeCC
Q 015021 77 EYITAIEWLVFEEMRALAVGTSRGYFL-VYD-LKGD----LVHRQLIHPGRIL-KLRVRGSRRDLTQDTAEEEVCVVMPG 149 (414)
Q Consensus 77 e~ITs~~~lpl~dw~~I~VG~ssG~vr-fyt-e~G~----LL~sQ~lh~~pV~-~ik~r~~~~~~~~~~~~eel~Ily~~ 149 (414)
..+|++.--...+.+|+-+||++|.|. +.. .++. .+......+.||. .+.+- + ...+.|+|..+.
T Consensus 340 ~~LTsVav~vv~~~TVlFLGTd~G~L~KVvv~~~~~~~~~~~~~ei~ee~~V~~~L~ld-------p-~~~~~LyV~s~~ 411 (476)
T 3nvn_B 340 SDLTSVYGTVVMNRTVLFLGTGDGQLLKVILGENLTSNCPEVIYEIKEETPVFYKLVPD-------P-VKNIYIYLTAGK 411 (476)
T ss_dssp SSEEEEEEEESSSSEEEEEEETTSEEEEEECCTTSCCCCCEEEEECTTCCCBCSCCEEC-------S-SCTTEEEEEETT
T ss_pred cCCceEEEEEeCCeEEEEEECCCceEEEEEecCCCCccceeEEEeecCCCccccccccC-------c-cccceEEEecCc
Confidence 358888877778999999999999986 332 2222 1111223344555 22211 0 125679999999
Q ss_pred eEEEEeCh
Q 015021 150 VLARFDGS 157 (414)
Q Consensus 150 ~iv~IdG~ 157 (414)
.|+.+.-.
T Consensus 412 ~V~qVPl~ 419 (476)
T 3nvn_B 412 EVRRIRVA 419 (476)
T ss_dssp EEEEEESC
T ss_pred EEEEEEhh
Confidence 99888765
No 254
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.16 E-value=4.3e+02 Score=28.15 Aligned_cols=73 Identities=12% Similarity=-0.024 Sum_probs=47.2
Q ss_pred CeEEEEEeEEe-----CCcEEEEEeccccEEEEE-e-cCCcEEeec--ccC-ccceeEEEEecccCCCCCCCCCCeEEEE
Q 015021 77 EYITAIEWLVF-----EEMRALAVGTSRGYFLVY-D-LKGDLVHRQ--LIH-PGRILKLRVRGSRRDLTQDTAEEEVCVV 146 (414)
Q Consensus 77 e~ITs~~~lpl-----~dw~~I~VG~ssG~vrfy-t-e~G~LL~sQ--~lh-~~pV~~ik~r~~~~~~~~~~~~eel~Il 146 (414)
...|+|..=.. .+.+++-+||++|.|.=. . .++..++.+ .|. +.||..+.+-... ..+.|+|.
T Consensus 397 ~~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~-------~~~~Lyv~ 469 (663)
T 1olz_A 397 VNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKK-------GNRFVYAG 469 (663)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSS-------SSCEEEEE
T ss_pred CceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCC-------CccEEEEE
Confidence 35677765332 336899999999999654 2 344445543 343 4688876643221 14779999
Q ss_pred eCCeEEEEeC
Q 015021 147 MPGVLARFDG 156 (414)
Q Consensus 147 y~~~iv~IdG 156 (414)
....|+.|.-
T Consensus 470 s~~~V~~vpl 479 (663)
T 1olz_A 470 SNSGVVQAPL 479 (663)
T ss_dssp CSSCEEEEES
T ss_pred EcCeEEEEEc
Confidence 9999987753
No 255
>4fww_A Macrophage-stimulating protein receptor; beta-propeller, cysteine-knot, receptor tyrosine kinase, MAC stimulating protein, N-glycosylation; HET: NAG BMA; 1.85A {Homo sapiens}
Probab=20.03 E-value=2.6e+02 Score=28.47 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=57.6
Q ss_pred CCeEEEEEeEEeCCcEEEEEeccccEEEEEe----cCCcEEee--cccC-ccceeEEEEecccCCCCCCCCCCeEEEEeC
Q 015021 76 SEYITAIEWLVFEEMRALAVGTSRGYFLVYD----LKGDLVHR--QLIH-PGRILKLRVRGSRRDLTQDTAEEEVCVVMP 148 (414)
Q Consensus 76 ~e~ITs~~~lpl~dw~~I~VG~ssG~vrfyt----e~G~LL~s--Q~lh-~~pV~~ik~r~~~~~~~~~~~~eel~Ily~ 148 (414)
+.++|+|.--+..+.+|+-+||++|.|.=.- .+...+.. |.+. ..||... .. ...+.|+|+..
T Consensus 404 ~~~~T~iav~~~~~~tV~FlGT~~G~l~Kv~~~~~~~~~~~~~~~~~~~~~~pi~~~--------l~--~~~~~Lyv~s~ 473 (527)
T 4fww_A 404 PVQVTALYVTRLDNVTVAHMGTMDGRILQVELVRSLNYLLYVSNFSLGDSGQPVQRD--------VS--RLGDHLLFASG 473 (527)
T ss_dssp TCCEEEEEEEEETTEEEEEEEETTSEEEEEECSCCSSCCCEEEEEEETTSCCCBCSC--------CE--EETTEEEEEET
T ss_pred ceEEEEEEEeccCCEEEEEEECCCCeEEEEEEcCCCCcceEEEEEEecCCCceeehh--------cc--cCCCEEEEEEC
Confidence 3568999888888899999999999987653 22233333 2333 3455421 11 11457999999
Q ss_pred CeEEEEeC----hhHHHHHHHHHHhccc--cccC
Q 015021 149 GVLARFDG----SEIQKMLQRWFQDSNS--NFWD 176 (414)
Q Consensus 149 ~~iv~IdG----~sL~~~Lr~c~~~~~~--~~w~ 176 (414)
..|.++.= =+.+.+=..|....-. ++|.
T Consensus 474 ~~V~~vpv~~~~C~~y~sC~~Cl~a~DPy~CgWc 507 (527)
T 4fww_A 474 DQVFQVPIQGPGCRHFLTCGRCLRAWHFMGCGWC 507 (527)
T ss_dssp TEEEEEETTCSCGGGCCSHHHHHHSCGGGCCEEC
T ss_pred CEEEEEeccccCCCCCCCHHHHhcCCCCCcCcCC
Confidence 99988852 3555555667543331 4665
Done!