Query 015023
Match_columns 414
No_of_seqs 246 out of 2191
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 05:18:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015023.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/015023hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1xbla_ a.2.3.1 (A:) DnaJ chap 99.9 5.1E-24 3.7E-28 166.1 4.9 73 15-87 2-74 (75)
2 d1hdja_ a.2.3.1 (A:) HSP40 {Hu 99.9 5.9E-23 4.3E-27 160.7 4.6 76 14-90 1-76 (77)
3 d1wjza_ a.2.3.1 (A:) CSL-type 99.8 1.5E-20 1.1E-24 152.3 3.6 70 13-82 13-88 (94)
4 d1gh6a_ a.2.3.1 (A:) Large T a 99.8 3.2E-20 2.3E-24 155.6 0.0 66 16-85 8-75 (114)
5 d1fafa_ a.2.3.1 (A:) Large T a 99.6 3.2E-17 2.4E-21 128.1 1.7 65 15-83 10-76 (79)
6 d1fpoa1 a.2.3.1 (A:1-76) HSC20 99.6 3.3E-17 2.4E-21 127.2 1.2 64 17-80 2-72 (76)
7 d1nz6a_ a.2.3.1 (A:) Auxilin J 99.6 1.6E-16 1.1E-20 129.3 3.0 65 14-78 31-98 (98)
8 d1iura_ a.2.3.1 (A:) Hypotheti 99.6 1.8E-16 1.3E-20 126.4 2.0 67 14-83 14-81 (88)
9 d1nlta3 g.54.1.1 (A:139-212) M 98.3 4.1E-07 3E-11 69.0 6.8 67 136-214 3-74 (74)
10 d1c3ga1 b.4.1.1 (A:180-259) He 98.2 1.5E-06 1.1E-10 66.6 6.7 41 214-266 34-74 (80)
11 d1exka_ g.54.1.1 (A:) Cysteine 98.1 9.7E-07 7.1E-11 67.6 4.4 65 136-214 12-78 (79)
12 d1nlta1 b.4.1.1 (A:110-138,A:2 97.6 4.1E-05 3E-09 57.5 5.2 37 216-265 31-67 (74)
13 d1exka_ g.54.1.1 (A:) Cysteine 95.0 0.0077 5.6E-07 45.1 3.4 22 178-199 55-76 (79)
14 d1c3ga2 b.4.1.1 (A:260-349) He 90.6 0.21 1.6E-05 37.6 5.8 22 217-238 35-56 (90)
15 d1nlta2 b.4.1.1 (A:258-337) Mi 90.1 0.014 1E-06 43.4 -1.5 25 264-288 2-27 (80)
16 d1c3ga2 b.4.1.1 (A:260-349) He 89.6 0.022 1.6E-06 43.4 -0.9 25 264-288 2-27 (90)
17 d1nlta2 b.4.1.1 (A:258-337) Mi 81.3 1.1 7.7E-05 32.6 5.1 26 111-137 2-27 (80)
18 d1nlta3 g.54.1.1 (A:139-212) M 81.0 0.47 3.4E-05 34.3 2.9 24 176-199 47-72 (74)
19 d1m1qa_ a.138.1.3 (A:) Flavocy 65.9 0.34 2.5E-05 36.0 -1.4 64 137-212 13-83 (90)
20 d1nlta1 b.4.1.1 (A:110-138,A:2 57.9 4.3 0.00032 28.7 3.6 21 114-135 3-23 (74)
21 d1k4ta1 a.2.8.1 (A:641-712) Eu 38.0 60 0.0044 22.7 7.9 46 295-340 5-58 (72)
22 d2e50a1 d.305.1.1 (A:1-222) Pr 36.7 44 0.0032 28.3 7.6 52 297-348 24-76 (222)
23 d1wg5a_ d.58.7.1 (A:) Heteroge 31.3 18 0.0013 26.5 3.5 37 4-40 3-39 (104)
24 d2b7ea1 a.159.2.1 (A:4-59) Pre 24.1 17 0.0012 24.5 1.9 47 32-81 1-52 (56)
25 d1qypa_ g.41.3.1 (A:) RBP9 sub 23.9 29 0.0021 23.2 3.1 35 152-194 16-50 (57)
26 d1ykhb1 a.252.1.1 (B:2-130) RN 21.4 61 0.0044 25.1 5.1 36 306-341 91-126 (129)
27 d1fxka_ a.2.5.1 (A:) Prefoldin 21.0 19 0.0014 26.9 1.8 63 257-319 44-106 (107)
28 d1r7ja_ a.4.5.49 (A:) Sso10a ( 21.0 48 0.0035 24.1 4.1 29 313-341 62-90 (90)
No 1
>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.88 E-value=5.1e-24 Score=166.08 Aligned_cols=73 Identities=44% Similarity=0.821 Sum_probs=69.1
Q ss_pred CCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhhhccccCcccccccCcccccccc
Q 015023 15 RRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAID 87 (414)
Q Consensus 15 ~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~AyevLsdp~kR~~YD~~G~~~~~ 87 (414)
.+|||+||||+++||.++||+|||+|++++|||++++++.+.+.|..|++||+||+||.+|+.||++|..+++
T Consensus 2 k~dyY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~e 74 (75)
T d1xbla_ 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (75)
T ss_dssp CCCTTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSSHHHHHHHHHTTSSCC
T ss_pred CCCHHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHhCccccC
Confidence 4699999999999999999999999999999999998888999999999999999999999999999987653
No 2
>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.86 E-value=5.9e-23 Score=160.74 Aligned_cols=76 Identities=50% Similarity=0.845 Sum_probs=70.4
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhhhccccCcccccccCccccccccccc
Q 015023 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEAIDAEG 90 (414)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~AyevLsdp~kR~~YD~~G~~~~~~~g 90 (414)
+.+|||+||||+++||.++|++||+++++++|||+++ ++.+.++|+.|++||+||+||.+|+.||++|..++++.|
T Consensus 1 m~kdyY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~-~~~~~~~~~~i~~Ay~vLsdp~~R~~YD~~g~~~~~g~g 76 (77)
T d1hdja_ 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNK-EPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSG 76 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCC-CTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSSC
T ss_pred CCCChHHHcCCCCCcCHHHHHHHHHHHHHHhcccccc-chhHHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcCCC
Confidence 4679999999999999999999999999999999997 677889999999999999999999999999998876543
No 3
>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.79 E-value=1.5e-20 Score=152.34 Aligned_cols=70 Identities=31% Similarity=0.603 Sum_probs=64.0
Q ss_pred CCCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHhhhhccccCcccccccCccc
Q 015023 13 TIRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSN------PEAAELFKEVAYSYSILSDPEKRRHYDNAG 82 (414)
Q Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~------~~a~~~f~~i~~AyevLsdp~kR~~YD~~G 82 (414)
...+|||+||||+++|+.++||+||++|+++||||+++.+ +.+.++|+.|++||+||+||.+|+.||...
T Consensus 13 ~~~~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~~~R~~YD~~~ 88 (94)
T d1wjza_ 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQR 88 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHS
T ss_pred hhccChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHcc
Confidence 4568999999999999999999999999999999998764 457788999999999999999999999754
No 4
>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}
Probab=99.75 E-value=3.2e-20 Score=155.57 Aligned_cols=66 Identities=24% Similarity=0.283 Sum_probs=60.6
Q ss_pred CCCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhhhccccCcccccccCcccccc
Q 015023 16 RDPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGFEA 85 (414)
Q Consensus 16 ~d~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~AyevLsdp~kR~~YD~~G~~~ 85 (414)
.|||+||||+++| +.++||+|||+||+++|||++++ + ++|+.|++||+||+||.+|+.||.+|...
T Consensus 8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~-~---e~F~~I~~AY~vLsd~~kR~~YD~~~~~~ 75 (114)
T d1gh6a_ 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-E---EKMKKMNTLYKKMEDGVKYAHQPDFGGFW 75 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-T---TTTHHHHHHHHHHHHHHHSCCSSCCSCCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhh-H---HHHHHHHHHHHHhCCHHHHHHHhccCCCC
Confidence 4899999999999 78899999999999999999974 3 58999999999999999999999988653
No 5
>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}
Probab=99.62 E-value=3.2e-17 Score=128.13 Aligned_cols=65 Identities=20% Similarity=0.303 Sum_probs=59.3
Q ss_pred CCCCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHhhhhccccCcccccccCcccc
Q 015023 15 RRDPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNPEAAELFKEVAYSYSILSDPEKRRHYDNAGF 83 (414)
Q Consensus 15 ~~d~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i~~AyevLsdp~kR~~YD~~G~ 83 (414)
..+||+||||++++ +.++||+|||++++++|||++. ++ ++|++|++||++|+|+.+|..||..|.
T Consensus 10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g-~~---e~~~~in~Ay~~L~d~~~r~~~~~~~~ 76 (79)
T d1fafa_ 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGG-SH---ALMQELNSLWGTFKTEVYNLRMNLGGT 76 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSC-CH---HHHHHHHHHHHHHHHHHHHHTTCCSSC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCC-CH---HHHHHHHHHHHHHCCHHHHHHHccCCC
Confidence 45899999999998 9999999999999999999985 43 689999999999999999999998753
No 6
>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}
Probab=99.61 E-value=3.3e-17 Score=127.25 Aligned_cols=64 Identities=22% Similarity=0.364 Sum_probs=57.0
Q ss_pred CCccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHhhhhccccCcccccccCc
Q 015023 17 DPYEVLCVSRDS--SDQEIKTAYRKLALKYHPDKNVSNP-----EAAELFKEVAYSYSILSDPEKRRHYDN 80 (414)
Q Consensus 17 d~Y~iLgv~~~a--s~~eIk~ayr~la~~~HPDk~~~~~-----~a~~~f~~i~~AyevLsdp~kR~~YD~ 80 (414)
|||+||||++++ +.++||+|||++++++|||+..+.+ .+...|+.|++||+||+||.+|+.|+.
T Consensus 2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp~~R~~Yll 72 (76)
T d1fpoa1 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLL 72 (76)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 899999999964 5899999999999999999987543 366779999999999999999999974
No 7
>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.59 E-value=1.6e-16 Score=129.34 Aligned_cols=65 Identities=23% Similarity=0.413 Sum_probs=59.3
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh---HHHHHHHHHhhhhccccCccccccc
Q 015023 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP---EAAELFKEVAYSYSILSDPEKRRHY 78 (414)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~---~a~~~f~~i~~AyevLsdp~kR~~Y 78 (414)
...+.|++|||+..+|.++||+|||++++.+|||+++++. .|...|+.|++||++|+||.+|+.|
T Consensus 31 ~~~~~y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~~~R~~Y 98 (98)
T d1nz6a_ 31 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 98 (98)
T ss_dssp TTCCSCCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTTTCCCCC
T ss_pred CcccCCeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCHHHHhcC
Confidence 3457899999999999999999999999999999987653 3778899999999999999999998
No 8
>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.57 E-value=1.8e-16 Score=126.36 Aligned_cols=67 Identities=30% Similarity=0.378 Sum_probs=59.5
Q ss_pred CCCCCccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHhhhhccccCcccccccCcccc
Q 015023 14 IRRDPYEVLCVSRDSSDQEIKTAYRKLALKYHPDKNVSNP-EAAELFKEVAYSYSILSDPEKRRHYDNAGF 83 (414)
Q Consensus 14 ~~~d~Y~iLgv~~~as~~eIk~ayr~la~~~HPDk~~~~~-~a~~~f~~i~~AyevLsdp~kR~~YD~~G~ 83 (414)
.-+|+|+||+|+.+||.+|||+|||+|+++||||++++++ .|.++|+.|++||++|++ ++.||++..
T Consensus 14 ~~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~---~~~~d~~~~ 81 (88)
T d1iura_ 14 ILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK---QAFLDQNAD 81 (88)
T ss_dssp CHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH---HTTCSSSSS
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH---HHHhhccch
Confidence 3469999999999999999999999999999999999775 488999999999999974 677777654
No 9
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.34 E-value=4.1e-07 Score=68.98 Aligned_cols=67 Identities=18% Similarity=0.180 Sum_probs=49.4
Q ss_pred ccccCCCccccCCccccccccccceee--eeeeccceeEEEEeeeccCcceeeecccCCCCccccccc---cCCCCCCce
Q 015023 136 TVRPLPIGTSVSGKVEKQCAHFFGVTI--NDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLALQ---EDSEKTGKV 210 (414)
Q Consensus 136 k~~~lc~Gtg~~g~~~k~C~~C~G~~i--~~~~~~~G~v~~~~s~C~~kfkli~f~~~~CgG~G~~i~---~~s~C~G~g 210 (414)
.+|+.|.|+|.......+|+.|.|.+. ..+++++ ++++.+.+| +.|+|.|.++. +|..|+|+|
T Consensus 3 v~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C-----------~~C~G~G~~i~~~~~C~~C~G~g 70 (74)
T d1nlta3 3 ILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTEC-----------DVCHGTGDIIDPKDRCKSCNGKK 70 (74)
T ss_dssp EECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSC-----------TTCSSSSSCCCTTSBCSSSTTSC
T ss_pred cCCcCCcccccCCCCCCCCCCCcceeeeeEEEEecC-cEEEEEEEC-----------ccCccceEEeCCCCCCCCCCCee
Confidence 468899999864334578999998544 3345555 455667889 99999997754 588899999
Q ss_pred Eeee
Q 015023 211 TSAG 214 (414)
Q Consensus 211 ~~~~ 214 (414)
++.+
T Consensus 71 ~v~E 74 (74)
T d1nlta3 71 VENE 74 (74)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 7754
No 10
>d1c3ga1 b.4.1.1 (A:180-259) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=98.17 E-value=1.5e-06 Score=66.56 Aligned_cols=41 Identities=10% Similarity=-0.091 Sum_probs=32.1
Q ss_pred eeEEEEEEEccCCCccceEEecCCCchhhhhccCCCCCCcceeccCCCeeEEE
Q 015023 214 GMYFLHFQVYRMDSTLNAIAIAKDPESAFFKRLEGLQPCEVSELKAGTHIFAV 266 (414)
Q Consensus 214 ~~~~l~v~Vp~G~~~g~~I~i~~~g~~g~~~rl~g~~~~~~~~i~~gd~~f~r 266 (414)
+...+.|.||+|+.+|++|+|++.| +..++.++ +||++|.+
T Consensus 34 ~~~~~~v~Ip~G~~~G~~i~~~g~G-----~~~~~~~~-------~GDl~~~i 74 (80)
T d1c3ga1 34 EKTQIDIQLKPGWKAGTKITYKNQG-----DYNPQTGR-------RKTLQFVI 74 (80)
T ss_dssp EEEEEEEECCTTCCTTCEEEESSCS-----SBCSSSSC-------BCEEEEEE
T ss_pred ceEEEEEEECCCCCCCcEEEECCcc-----ccCcCCCC-------CCCEEEEE
Confidence 4467899999999999999999999 66665543 66666653
No 11
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}
Probab=98.11 E-value=9.7e-07 Score=67.63 Aligned_cols=65 Identities=14% Similarity=0.178 Sum_probs=48.2
Q ss_pred ccccCCCcccc-CCccccccccccceeeeeeeccceeEEEEeeeccCcceeeecccCCCCccccccc-cCCCCCCceEee
Q 015023 136 TVRPLPIGTSV-SGKVEKQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLALQ-EDSEKTGKVTSA 213 (414)
Q Consensus 136 k~~~lc~Gtg~-~g~~~k~C~~C~G~~i~~~~~~~G~v~~~~s~C~~kfkli~f~~~~CgG~G~~i~-~~s~C~G~g~~~ 213 (414)
..|+.|.|+|. ++..+.+|+.|.|.+.+.... |+++. +.+| +.|+|+|.++. +|..|.|+|++.
T Consensus 12 ~~C~~C~G~G~~~g~~~~~C~~C~G~G~v~~~~--g~~~~-~~~C-----------~~C~G~G~~i~~~C~~C~G~G~v~ 77 (79)
T d1exka_ 12 EECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ--GFFAV-QQTC-----------PHCQGRGTLIKDPCNKCHGHGRVE 77 (79)
T ss_dssp EECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE--TTEEE-EEEC-----------TTTTTSSEECSSBCGGGTTSSEEE
T ss_pred ccCCCCcCcccCCCccceeCCCccceeEEEEec--cccee-eEEC-----------cccCcceeECCCCCCCCCCceEee
Confidence 46889999986 566678899999977655444 33333 4578 99999997764 578899999775
Q ss_pred e
Q 015023 214 G 214 (414)
Q Consensus 214 ~ 214 (414)
.
T Consensus 78 k 78 (79)
T d1exka_ 78 R 78 (79)
T ss_dssp C
T ss_pred c
Confidence 4
No 12
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.56 E-value=4.1e-05 Score=57.48 Aligned_cols=37 Identities=14% Similarity=0.135 Sum_probs=29.6
Q ss_pred EEEEEEEccCCCccceEEecCCCchhhhhccCCCCCCcceeccCCCeeEE
Q 015023 216 YFLHFQVYRMDSTLNAIAIAKDPESAFFKRLEGLQPCEVSELKAGTHIFA 265 (414)
Q Consensus 216 ~~l~v~Vp~G~~~g~~I~i~~~g~~g~~~rl~g~~~~~~~~i~~gd~~f~ 265 (414)
..+.|.||+|+.+|++|++++.| +..++.. +||++|.
T Consensus 31 ~~~~i~Ip~G~~~G~~ir~~g~G-----~~~~~~~--------~GDl~v~ 67 (74)
T d1nlta1 31 KILEVHVEPGMKDGQRIVFKGEA-----DQAPDVI--------PGDVVFI 67 (74)
T ss_dssp EEEEEEECTTCCTTCEEEETTCS-----CCCTTCB--------CCCEEEE
T ss_pred ccEEEEecccccCCeEEEecCCc-----CCCCCCC--------CCCEEEE
Confidence 45789999999999999999999 6666655 5555555
No 13
>d1exka_ g.54.1.1 (A:) Cysteine-rich domain of the chaperone protein DnaJ {Escherichia coli [TaxId: 562]}
Probab=94.96 E-value=0.0077 Score=45.06 Aligned_cols=22 Identities=18% Similarity=0.096 Sum_probs=9.6
Q ss_pred eccCcceeeecccCCCCccccc
Q 015023 178 TAQSKFKLLYFEQDTNGGYGLA 199 (414)
Q Consensus 178 ~C~~kfkli~f~~~~CgG~G~~ 199 (414)
.|++.++++..+|..|+|.|.+
T Consensus 55 ~C~G~G~~i~~~C~~C~G~G~v 76 (79)
T d1exka_ 55 HCQGRGTLIKDPCNKCHGHGRV 76 (79)
T ss_dssp TTTTSSEECSSBCGGGTTSSEE
T ss_pred ccCcceeECCCCCCCCCCceEe
Confidence 3333344444444555555543
No 14
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.57 E-value=0.21 Score=37.56 Aligned_cols=22 Identities=5% Similarity=-0.117 Sum_probs=18.9
Q ss_pred EEEEEEccCCCccceEEecCCC
Q 015023 217 FLHFQVYRMDSTLNAIAIAKDP 238 (414)
Q Consensus 217 ~l~v~Vp~G~~~g~~I~i~~~g 238 (414)
.+.+.||+|...++.+++++.|
T Consensus 35 ~i~i~ip~~~~~g~~~~i~g~G 56 (90)
T d1c3ga2 35 TLPLSRVQPVQPSQTSTYPGQG 56 (90)
T ss_dssp EEEEEESSCCCTTCEEECTTCS
T ss_pred ceecccccccccccccccCCCC
Confidence 3567889999999999999988
No 15
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=90.08 E-value=0.014 Score=43.43 Aligned_cols=25 Identities=20% Similarity=0.400 Sum_probs=22.7
Q ss_pred EEEeCCceeEecCccE-EEecCcchh
Q 015023 264 FAVYGDNFFKTATYTI-EALCAKSYE 288 (414)
Q Consensus 264 f~r~Gdnl~~~~~isl-eal~g~s~~ 288 (414)
|.|.|+||++++.|++ +|++|.++.
T Consensus 2 F~R~G~dL~~~~~I~~~eal~G~~~~ 27 (80)
T d1nlta2 2 FKRDGDDLVYEAEIDLLTAIAGGEFA 27 (80)
T ss_dssp CEEETTEEEEEEEEEHHHHHHCBCCE
T ss_pred cEEeCCEEEEEEEeCHHHHhCCCEEE
Confidence 7899999999999998 999997753
No 16
>d1c3ga2 b.4.1.1 (A:260-349) Heat shock protein 40 Sis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=89.59 E-value=0.022 Score=43.43 Aligned_cols=25 Identities=28% Similarity=0.328 Sum_probs=23.0
Q ss_pred EEEeCCceeEecCccE-EEecCcchh
Q 015023 264 FAVYGDNFFKTATYTI-EALCAKSYE 288 (414)
Q Consensus 264 f~r~Gdnl~~~~~isl-eal~g~s~~ 288 (414)
|.|+|+||+++..|++ +|++|.++.
T Consensus 2 F~R~G~DL~~~~~I~~~eal~G~~~~ 27 (90)
T d1c3ga2 2 FKRDGDDLIYTLPLSFKESLLGFSKT 27 (90)
T ss_dssp EEEETTEEEEEECCBHHHHHHCEEEE
T ss_pred CeEeCCeEEEEEEeCHHHHhcCCeEE
Confidence 8999999999999998 999998753
No 17
>d1nlta2 b.4.1.1 (A:258-337) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=81.30 E-value=1.1 Score=32.59 Aligned_cols=26 Identities=19% Similarity=0.144 Sum_probs=20.6
Q ss_pred hcccCccceeccchhhHHHHhcCcccc
Q 015023 111 FSKLGVPIKTTISANVLEEALNGTVTV 137 (414)
Q Consensus 111 Fg~~G~di~~~I~~~sLeEa~~G~vk~ 137 (414)
|...|.|+.+++.+ +|.||+.|+...
T Consensus 2 F~R~G~dL~~~~~I-~~~eal~G~~~~ 27 (80)
T d1nlta2 2 FKRDGDDLVYEAEI-DLLTAIAGGEFA 27 (80)
T ss_dssp CEEETTEEEEEEEE-EHHHHHHCBCCE
T ss_pred cEEeCCEEEEEEEe-CHHHHhCCCEEE
Confidence 44568899999999 999998887643
No 18
>d1nlta3 g.54.1.1 (A:139-212) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), insert domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.99 E-value=0.47 Score=34.33 Aligned_cols=24 Identities=4% Similarity=-0.003 Sum_probs=15.8
Q ss_pred eeeccCcceeee--cccCCCCccccc
Q 015023 176 TSTAQSKFKLLY--FEQDTNGGYGLA 199 (414)
Q Consensus 176 ~s~C~~kfkli~--f~~~~CgG~G~~ 199 (414)
...|+++++++. .+|..|+|.|++
T Consensus 47 C~~C~G~G~~i~~~~~C~~C~G~g~v 72 (74)
T d1nlta3 47 CDVCHGTGDIIDPKDRCKSCNGKKVE 72 (74)
T ss_dssp CTTCSSSSSCCCTTSBCSSSTTSCEE
T ss_pred CccCccceEEeCCCCCCCCCCCeeEe
Confidence 455666665543 356999999864
No 19
>d1m1qa_ a.138.1.3 (A:) Flavocytochrome c3 (respiratory fumarate reductase), N-terminal domain {Shewanella oneidensis [TaxId: 70863]}
Probab=65.85 E-value=0.34 Score=35.99 Aligned_cols=64 Identities=6% Similarity=-0.126 Sum_probs=38.6
Q ss_pred cccCCCccccCC----ccccccccccceeeeeee--ccceeEEEEeeeccCcceeeecccCCCCcccccc-ccCCCCCCc
Q 015023 137 VRPLPIGTSVSG----KVEKQCAHFFGVTINDQQ--AEAGIVVRVTSTAQSKFKLLYFEQDTNGGYGLAL-QEDSEKTGK 209 (414)
Q Consensus 137 ~~~lc~Gtg~~g----~~~k~C~~C~G~~i~~~~--~~~G~v~~~~s~C~~kfkli~f~~~~CgG~G~~i-~~~s~C~G~ 209 (414)
.|..|+|.+... ..+.+|..|.|....... ...+.+ ....+| ..|+|.|..+ ..|..|++.
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~C~~CHg~~~~~~~~~~~h~~~-~~c~~C-----------H~~H~~~~~~~~~C~~CH~~ 80 (90)
T d1m1qa_ 13 GCESCHKDGTPSADGAFEFAQCQSCHGKLSEMDAVHKPHDGN-LVCADC-----------HAVHDMNVGQKPTCESCHDD 80 (90)
T ss_dssp CGGGTSGGGCCCSSSHHHHHHHHHHHCCGGGSCTTTGGGTTT-CCGGGT-----------CCTTTSBTTCCCCSTTTCSS
T ss_pred CCCCcCCCCccccCCCCCCCcCcccCCCceeEeeccccccCc-cccccC-----------ccccCCCCcCCCccccccCC
Confidence 488898876422 124589999884332221 122222 223455 8889988665 447789998
Q ss_pred eEe
Q 015023 210 VTS 212 (414)
Q Consensus 210 g~~ 212 (414)
|+.
T Consensus 81 gr~ 83 (90)
T d1m1qa_ 81 GRT 83 (90)
T ss_dssp CCC
T ss_pred Ccc
Confidence 754
No 20
>d1nlta1 b.4.1.1 (A:110-138,A:213-257) Mitochondrial protein import protein mas5 (Hsp40, Ydj1), C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.92 E-value=4.3 Score=28.71 Aligned_cols=21 Identities=48% Similarity=0.534 Sum_probs=16.2
Q ss_pred cCccceeccchhhHHHHhcCcc
Q 015023 114 LGVPIKTTISANVLEEALNGTV 135 (414)
Q Consensus 114 ~G~di~~~I~~~sLeEa~~G~v 135 (414)
.|.|+..++.+ +|+|||+|+.
T Consensus 3 kg~di~~~l~i-sleea~~G~~ 23 (74)
T d1nlta1 3 RGKDIKHEISA-SLEELYKGRT 23 (74)
T ss_dssp BCCCEEEEEEE-CTTHHHHCEE
T ss_pred CCCCEEEEEEe-cHHHHHhhcc
Confidence 46778888888 8888888864
No 21
>d1k4ta1 a.2.8.1 (A:641-712) Eukaryotic DNA topoisomerase I, dispensable insert domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.05 E-value=60 Score=22.71 Aligned_cols=46 Identities=17% Similarity=0.272 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhhhhhHHHHHHHH
Q 015023 295 KDIEAQILRKRKELREFEIEYRKALARFQ--------EATNRYSQEKQSVDELL 340 (414)
Q Consensus 295 ~~~E~~~~~~k~e~~~f~~e~~~~~~~~~--------~~~~~~~~~~~~~~~~~ 340 (414)
..+-..|..+++++..-+.|+.+|++.|. .++++-+...+.+.+-|
T Consensus 5 enLq~KI~~Kk~qi~~a~~e~K~ak~d~k~~~~~k~k~~~ekKkK~leRL~EQL 58 (72)
T d1k4ta1 5 MNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQL 58 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788888888888888888887776 24444444444444433
No 22
>d2e50a1 d.305.1.1 (A:1-222) Protein SET {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.74 E-value=44 Score=28.31 Aligned_cols=52 Identities=12% Similarity=0.162 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHhHHhhhh
Q 015023 297 IEAQILRKRKELREFEIEYRKALARFQEATNRYSQEKQSV-DELLKQRDAIHS 348 (414)
Q Consensus 297 ~E~~~~~~k~e~~~f~~e~~~~~~~~~~~~~~~~~~~~~~-~~~~~~r~~~~~ 348 (414)
+|.+....=.+|..+|.|+.+.-++|.+.+.++.++-... .-|+.+|.+|-.
T Consensus 24 ~~~~~~~~i~~L~~iQ~e~~~l~~e~~~e~~~le~k~~~~~~ply~~R~~iI~ 76 (222)
T d2e50a1 24 SEKEQQEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELIA 76 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc
Confidence 3344444445666666666666666655444444333322 346677766643
No 23
>d1wg5a_ d.58.7.1 (A:) Heterogeneous nuclear ribonucleoprotein H' {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.28 E-value=18 Score=26.46 Aligned_cols=37 Identities=19% Similarity=0.162 Sum_probs=25.3
Q ss_pred CCCCCCCCCCCCCCCccccCCCCCCCHHHHHHHHHHH
Q 015023 4 NKMEGSSAPTIRRDPYEVLCVSRDSSDQEIKTAYRKL 40 (414)
Q Consensus 4 ~~~~~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l 40 (414)
+...+.+++..+..+--|-|||.+++.++|+..|...
T Consensus 3 sg~~~~~~~~~~~~~v~v~nLP~~~te~dI~~~F~~~ 39 (104)
T d1wg5a_ 3 SGSSGNSPDTANDGFVRLRGLPFGCSKEEIVQFFSGL 39 (104)
T ss_dssp CCCCCCCSSCSCCCEEEEESCCTTCCHHHHHHHTTTC
T ss_pred CCCCCCCCCCCCCcEEEEeCCCCCCCHHHHHHHHHhc
Confidence 3444555544444455566999999999999887653
No 24
>d2b7ea1 a.159.2.1 (A:4-59) Pre-mRNA-processing protein PRP40 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.09 E-value=17 Score=24.46 Aligned_cols=47 Identities=15% Similarity=0.300 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCChHHHHHHHHH---hhhhccc-cCc-ccccccCcc
Q 015023 32 EIKTAYRKLALKYHPDKNVSNPEAAELFKEV---AYSYSIL-SDP-EKRRHYDNA 81 (414)
Q Consensus 32 eIk~ayr~la~~~HPDk~~~~~~a~~~f~~i---~~AyevL-sdp-~kR~~YD~~ 81 (414)
|.++||.+|.+..+-+..- .=......| .--|-+| .|| ++++.||.|
T Consensus 1 Ea~~aF~~lL~e~~V~s~w---tWeq~~~~i~~~DPrY~al~~~~~eRK~~Fe~Y 52 (56)
T d2b7ea1 1 EAEKEFITMLKENQVDSTW---SFSRIISELGTRDPRYWMVDDDPLWKKEMFEKY 52 (56)
T ss_dssp HHHHHHHHHHHHTTCCSSC---CHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHcCCCCCC---cHHHHHHHHhccCcchHhhcCChHHHHHHHHHH
Confidence 4678999998886544432 112333432 3578888 577 688888876
No 25
>d1qypa_ g.41.3.1 (A:) RBP9 subunit of RNA polymerase II {Archaeon Thermococcus celer [TaxId: 2264]}
Probab=23.89 E-value=29 Score=23.25 Aligned_cols=35 Identities=11% Similarity=0.145 Sum_probs=21.8
Q ss_pred cccccccceeeeeeeccceeEEEEeeeccCcceeeecccCCCC
Q 015023 152 KQCAHFFGVTINDQQAEAGIVVRVTSTAQSKFKLLYFEQDTNG 194 (414)
Q Consensus 152 k~C~~C~G~~i~~~~~~~G~v~~~~s~C~~kfkli~f~~~~Cg 194 (414)
.+|+.|.....+ +.+.|...-+-...++|.|..|+
T Consensus 16 ~~CpkC~~~~a~--------~~~~QtRsaDE~~T~fy~C~~Cg 50 (57)
T d1qypa_ 16 ITCPKCGNDTAY--------WWEMQTRAGDEPSTIFYKCTKCG 50 (57)
T ss_dssp CCCTTTCCSEEE--------EEEECCSSSSCSSEEEEEESSSC
T ss_pred CCCCCCCCCceE--------EEEeecccccCCCeEEEEeCCCC
Confidence 479999874332 22334444466667777778776
No 26
>d1ykhb1 a.252.1.1 (B:2-130) RNA polymerase II holoenzyme component SRB7 (MED21) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=21.45 E-value=61 Score=25.08 Aligned_cols=36 Identities=11% Similarity=0.181 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 015023 306 KELREFEIEYRKALARFQEATNRYSQEKQSVDELLK 341 (414)
Q Consensus 306 ~e~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (414)
+-|..++.|..+|-.+..+++.+-......|+++|+
T Consensus 91 ~~i~~Le~E~~~~~~el~~~v~e~e~ll~~i~~~i~ 126 (129)
T d1ykhb1 91 RKIDMLQKKLVEVEDEKIEAIKKKEKLMRHVDSMIE 126 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446677788888888888888777777777777765
No 27
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=21.02 E-value=19 Score=26.95 Aligned_cols=63 Identities=19% Similarity=0.270 Sum_probs=0.0
Q ss_pred ccCCCeeEEEeCCceeEecCccEEEecCcchhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 015023 257 LKAGTHIFAVYGDNFFKTATYTIEALCAKSYEDNSQKLKDIEAQILRKRKELREFEIEYRKAL 319 (414)
Q Consensus 257 i~~gd~~f~r~Gdnl~~~~~isleal~g~s~~~~~~~i~~~E~~~~~~k~e~~~f~~e~~~~~ 319 (414)
++++..+|.-.|.=|+.+..-.+...+-.........|..++.++....++|..++.++.+++
T Consensus 44 l~~d~~vyk~vG~vLv~~~~~e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l~~~~ 106 (107)
T d1fxka_ 44 AADDAEVYKSSGNILIRVAKDELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNIQEAM 106 (107)
T ss_dssp SCTTCCEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCcccHHHHHhcchhhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
No 28
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=20.98 E-value=48 Score=24.08 Aligned_cols=29 Identities=21% Similarity=0.376 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHHhhhhhHHHHHHHHH
Q 015023 313 IEYRKALARFQEATNRYSQEKQSVDELLK 341 (414)
Q Consensus 313 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (414)
.+|.+...+|.++.....+...+|.+||+
T Consensus 62 ~~~L~~~~~~~~~~~~l~~l~~~i~~~l~ 90 (90)
T d1r7ja_ 62 EELLEDIRKFNEMRKNMDQLKEKINSVLS 90 (90)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 35777777888888888888888888874
Done!