Query 015024
Match_columns 414
No_of_seqs 312 out of 1708
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 05:19:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015024.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015024hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hcn_A Ferrochelatase, mitocho 100.0 2.8E-93 9.7E-98 717.2 36.9 329 2-340 5-339 (359)
2 1lbq_A Ferrochelatase; rossman 100.0 2.2E-91 7.6E-96 705.2 29.0 318 2-329 8-330 (362)
3 2h1v_A Ferrochelatase; rossman 100.0 1E-79 3.6E-84 609.6 31.3 298 2-326 6-309 (310)
4 2xvy_A Chelatase, putative; me 100.0 1.5E-33 5.1E-38 272.6 17.7 229 65-325 16-265 (269)
5 2jh3_A Ribosomal protein S2-re 100.0 1.8E-30 6.2E-35 269.4 14.9 238 64-330 9-270 (474)
6 2xwp_A Sirohydrochlorin cobalt 99.9 8.8E-26 3E-30 218.2 24.4 230 65-326 9-257 (264)
7 3lyh_A Cobalamin (vitamin B12) 99.1 3.1E-10 1.1E-14 97.0 11.2 111 64-182 11-123 (126)
8 2xws_A Sirohydrochlorin cobalt 99.1 3.5E-10 1.2E-14 97.1 9.5 110 64-181 9-127 (133)
9 1tjn_A Sirohydrochlorin cobalt 99.1 2.9E-10 9.9E-15 101.2 9.0 110 65-182 31-149 (156)
10 3lyh_A Cobalamin (vitamin B12) 98.9 2.1E-08 7.4E-13 85.5 14.1 116 189-326 6-122 (126)
11 2xws_A Sirohydrochlorin cobalt 98.7 5.4E-08 1.8E-12 83.3 10.7 118 189-327 4-128 (133)
12 1tjn_A Sirohydrochlorin cobalt 98.5 8.1E-07 2.8E-11 78.8 11.3 118 189-327 25-149 (156)
13 2xwp_A Sirohydrochlorin cobalt 98.4 1.1E-06 3.6E-11 84.4 10.0 106 65-181 144-257 (264)
14 2xvy_A Chelatase, putative; me 98.4 5.6E-06 1.9E-10 79.2 14.3 126 188-327 9-141 (269)
15 2h1v_A Ferrochelatase; rossman 98.0 3.5E-05 1.2E-09 75.6 12.4 112 195-327 51-167 (310)
16 2jh3_A Ribosomal protein S2-re 97.7 2.7E-05 9.1E-10 80.8 6.3 122 189-327 4-136 (474)
17 2bhw_A Chlorophyll A-B binding 97.7 1.5E-05 5.2E-10 75.2 3.8 35 374-408 176-210 (232)
18 1lbq_A Ferrochelatase; rossman 97.7 0.00026 9E-09 71.0 13.0 86 234-327 100-188 (362)
19 3pl9_A Chlorophyll A-B binding 97.6 2.8E-05 9.5E-10 73.5 4.0 35 374-408 193-227 (243)
20 3hcn_A Ferrochelatase, mitocho 97.5 0.00047 1.6E-08 69.0 10.6 110 65-182 207-327 (359)
21 2wsc_2 LHCA2, type II chloroph 97.5 1.5E-05 5E-10 76.7 -0.4 38 371-408 214-251 (269)
22 2wsc_3 LHCA3, type II chloroph 97.3 2.7E-05 9.1E-10 75.2 -0.3 36 373-408 223-258 (276)
23 2wsc_1 AT3G54890, LHCA1; photo 97.0 8.7E-05 3E-09 70.3 -0.1 36 374-409 187-223 (241)
24 2wsc_4 Chlorophyll A-B binding 96.8 0.00011 3.9E-09 70.0 -1.4 36 370-405 87-122 (251)
25 3pl9_A Chlorophyll A-B binding 96.5 0.001 3.5E-08 62.8 2.6 38 364-401 82-119 (243)
26 2wsc_3 LHCA3, type II chloroph 96.1 0.00013 4.5E-09 70.3 -6.1 33 372-404 97-129 (276)
27 2wsc_4 Chlorophyll A-B binding 95.8 0.0015 5.2E-08 62.2 0.1 33 375-408 201-233 (251)
28 2wsc_2 LHCA2, type II chloroph 95.6 0.004 1.4E-07 59.8 1.9 35 370-404 98-132 (269)
29 2bhw_A Chlorophyll A-B binding 94.5 0.021 7.3E-07 53.6 3.5 28 373-400 60-87 (232)
30 2wsc_1 AT3G54890, LHCA1; photo 80.2 0.081 2.8E-06 49.9 -4.3 28 372-399 81-108 (241)
31 1pq4_A Periplasmic binding pro 54.1 34 0.0012 32.4 7.8 133 160-322 132-282 (291)
32 3nav_A Tryptophan synthase alp 53.1 42 0.0014 31.7 8.2 91 213-322 83-174 (271)
33 2nly_A BH1492 protein, diverge 51.6 1.5E+02 0.0052 27.4 14.6 88 91-178 27-126 (245)
34 3rpe_A MDAB, modulator of drug 46.7 92 0.0031 28.2 9.2 73 67-145 33-110 (218)
35 3p6l_A Sugar phosphate isomera 46.0 99 0.0034 27.6 9.4 34 234-271 10-43 (262)
36 3bdk_A D-mannonate dehydratase 43.6 39 0.0013 33.6 6.6 65 245-311 25-90 (386)
37 4b4o_A Epimerase family protei 43.1 44 0.0015 30.7 6.6 32 6-37 214-247 (298)
38 3ff4_A Uncharacterized protein 41.8 19 0.00065 29.8 3.4 39 250-299 69-107 (122)
39 2qv5_A AGR_C_5032P, uncharacte 41.4 2.3E+02 0.0077 26.5 14.2 88 91-178 54-153 (261)
40 3gi1_A LBP, laminin-binding pr 36.7 1.1E+02 0.0039 28.6 8.5 136 160-321 121-278 (286)
41 3lm3_A Uncharacterized protein 36.5 87 0.003 30.6 7.4 105 72-176 50-164 (449)
42 3cx3_A Lipoprotein; zinc-bindi 36.5 1.8E+02 0.006 27.1 9.8 135 160-322 119-277 (284)
43 1xvl_A Mn transporter, MNTC pr 35.3 92 0.0031 29.9 7.7 141 160-323 144-308 (321)
44 3lup_A DEGV family protein; PS 34.8 36 0.0012 32.2 4.6 111 101-228 65-190 (285)
45 1t5b_A Acyl carrier protein ph 33.3 2E+02 0.0069 24.3 9.0 32 67-98 9-42 (201)
46 3nyi_A FAT acid-binding protei 31.6 83 0.0028 29.8 6.6 63 101-168 66-131 (297)
47 1tz9_A Mannonate dehydratase; 31.5 85 0.0029 30.2 6.8 65 245-311 15-81 (367)
48 3hh8_A Metal ABC transporter s 31.0 1.8E+02 0.0062 27.3 8.9 139 160-321 123-285 (294)
49 3lub_A Putative creatinine ami 30.2 82 0.0028 29.3 6.1 35 68-102 38-76 (254)
50 3jr7_A Uncharacterized EGV fam 29.6 1.7E+02 0.0059 27.7 8.5 64 101-169 81-144 (298)
51 3t5s_A Gilaa.00834.A, macropha 29.5 97 0.0033 25.8 5.9 75 162-240 31-122 (135)
52 3pl5_A SMU_165, putative uncha 28.8 1E+02 0.0036 29.6 6.8 63 101-168 97-162 (320)
53 3v4k_A DNA DC->DU-editing enzy 27.5 80 0.0027 28.7 5.3 64 214-284 111-175 (203)
54 3dmy_A Protein FDRA; predicted 25.8 54 0.0019 33.6 4.3 42 250-299 47-88 (480)
55 2o1e_A YCDH; alpha-beta protei 25.4 3.1E+02 0.011 25.9 9.5 55 160-226 132-186 (312)
56 2hl0_A Threonyl-tRNA synthetas 25.0 2E+02 0.0067 24.6 7.0 45 260-305 69-116 (143)
57 3eb2_A Putative dihydrodipicol 24.9 2E+02 0.0067 27.1 7.9 66 250-318 83-155 (300)
58 3fdj_A DEGV family protein; GU 24.7 3.3E+02 0.011 25.3 9.3 113 101-228 61-185 (278)
59 2i6j_A Ssoptp, sulfolobus solf 24.6 1.6E+02 0.0056 24.0 6.6 53 250-308 15-69 (161)
60 1uta_A FTSN, MSGA, cell divisi 23.9 46 0.0016 24.9 2.6 14 76-89 21-34 (81)
61 2amj_A Modulator of drug activ 23.9 3.6E+02 0.012 23.4 9.4 73 67-145 20-97 (204)
62 3qfe_A Putative dihydrodipicol 23.8 2.1E+02 0.0071 27.3 7.9 70 249-319 89-166 (318)
63 2yxg_A DHDPS, dihydrodipicolin 23.3 2.9E+02 0.01 25.7 8.7 77 66-147 45-124 (289)
64 2ojp_A DHDPS, dihydrodipicolin 23.2 2.7E+02 0.0091 26.0 8.5 77 66-147 46-125 (292)
65 3lmz_A Putative sugar isomeras 22.9 3.1E+02 0.01 24.2 8.6 60 254-323 65-124 (257)
66 2xio_A Putative deoxyribonucle 22.5 4.5E+02 0.015 24.1 11.0 28 98-125 22-49 (301)
67 2prs_A High-affinity zinc upta 22.2 2.9E+02 0.01 25.5 8.5 137 160-322 116-275 (284)
68 2wkj_A N-acetylneuraminate lya 22.2 3.1E+02 0.011 25.7 8.8 77 66-147 56-135 (303)
69 2ehh_A DHDPS, dihydrodipicolin 21.8 3.3E+02 0.011 25.4 8.8 77 66-147 45-124 (294)
70 1bqc_A Protein (beta-mannanase 21.7 4.6E+02 0.016 23.9 10.5 85 189-279 79-172 (302)
71 3gxh_A Putative phosphatase (D 21.6 2.5E+02 0.0087 23.3 7.3 65 250-324 28-95 (157)
72 3m5v_A DHDPS, dihydrodipicolin 21.6 2.8E+02 0.0096 26.0 8.3 95 212-320 60-161 (301)
73 3cpr_A Dihydrodipicolinate syn 21.6 3.7E+02 0.013 25.2 9.2 77 66-147 61-140 (304)
74 3flu_A DHDPS, dihydrodipicolin 21.3 3.7E+02 0.013 25.1 9.0 77 66-147 52-131 (297)
75 3si9_A DHDPS, dihydrodipicolin 21.0 2.7E+02 0.0093 26.4 8.1 68 249-319 100-174 (315)
76 3nco_A Endoglucanase fncel5A; 20.8 4.9E+02 0.017 23.9 10.2 133 102-273 40-179 (320)
77 3daq_A DHDPS, dihydrodipicolin 20.6 2.2E+02 0.0075 26.7 7.2 93 212-319 55-154 (292)
No 1
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=100.00 E-value=2.8e-93 Score=717.18 Aligned_cols=329 Identities=39% Similarity=0.618 Sum_probs=303.1
Q ss_pred ceEEEEeccccCCcchHHHHHHhhcCCCCcccCCcchhhhHHHHHHHhcCCCchhHHHHHhccCCCCCchHHHHHHHHHH
Q 015024 2 SAFFLFYFVYISASSSLHLRFSQLQVPTDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEEL 81 (414)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~fL~~flsD~rVi~lp~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~qa~~L 81 (414)
.|+||.|||||++.++|.+||+|||+|||||++|. |++|+++|+++|++|++++|++|||||||+.+|++|+++|
T Consensus 5 ~gVLL~nlG~P~~~~~V~~fL~~~~~d~~Vi~~P~-----~~~L~~~I~~~R~~k~~~~Y~~igggSPL~~~t~~Q~~~L 79 (359)
T 3hcn_A 5 TGILMLNMGGPETLGDVHDFLLRLFLDRDLMTLPI-----QNKLAPFIAKRRTPKIQEQYRRIGGGSPIKIWTSKQGEGM 79 (359)
T ss_dssp EEEEEEECCCCSSGGGHHHHHHHHHTCTTTCCCTT-----HHHHHHHHHHHHHHHHHHHHHHTTSSCCHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCCHHHHHHHHHHHccCCcccccch-----HHHHhHHhcccchHHHHHHHHHcCCCCcHHHHHHHHHHHH
Confidence 58999999999999999999999999999999982 6799999999999999999999999999999999999999
Q ss_pred HHHhhccC---CCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEE
Q 015024 82 RKSLWEKN---LPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTV 158 (414)
Q Consensus 82 ~~~L~~~~---~~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~ 158 (414)
++.|++.+ .+++|++|||||+|++++++++|+++|+++|+++|||||||++||||+++++.+.+++....+.+++++
T Consensus 80 ~~~L~~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPlyPqyS~~Ttgs~~~~~~~~~~~~~~~~~~~~~~ 159 (359)
T 3hcn_A 80 VKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKWST 159 (359)
T ss_dssp HHHHHHHCGGGCSEEEEEEESSSSSBHHHHHHHHHHTTCSEEEEEESCSSCCTTTHHHHHHHHHHHHHHTTCCCSSEEEE
T ss_pred HHHHhhhcccccCceEEEEEeeCCCCHHHHHHHHHhcCCCeEEEEECCccccccchhhHHHHHHHHHHHhccCCCCceEE
Confidence 99997643 358999999999999999999999999999999999999999999999999998887655556778999
Q ss_pred eCCCCCChHHHHHHHHHHHHHHHhCCCC--CceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEE
Q 015024 159 IPSWYQREGYITAMANLIEKELQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTL 236 (414)
Q Consensus 159 i~~~~~~p~yI~a~a~~I~~~l~~~~~~--~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~l 236 (414)
|++||+||.||+|++++|++++++++.+ ++++|||||||+|++++ ++||||++||++|+++|+++||+. ++|.+
T Consensus 160 i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~~~LlfSaHgiP~~~~-~~GDpY~~q~~~t~~lv~e~Lg~~---~~~~l 235 (359)
T 3hcn_A 160 IDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVV-NRGDPYPQEVSATVQKVMERLEYC---NPYRL 235 (359)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHTTSCTTTGGGCEEEEEEECCBHHHH-TTTCSHHHHHHHHHHHHHHHTTTC---SCEEE
T ss_pred eCCccCCHHHHHHHHHHHHHHHHhCCccccCCcEEEEEcCCChHhhc-ccCCCHHHHHHHHHHHHHHHcCCC---CCEEE
Confidence 9999999999999999999999887532 45689999999999999 799999999999999999999874 35999
Q ss_pred EEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEcccccccchhhHHHHHHHH-HHHHHhcCCeeEEEcCCCCCCHHHHH
Q 015024 237 AYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEY-KELALKSGIEKWGRVPALGCEATFIS 315 (414)
Q Consensus 237 afQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~-~e~a~~~G~~~~~~vp~lNd~p~fi~ 315 (414)
+||||+|+.+||+|+|+|+|++|+++|+|+|+|+||||++||+|||||||+|+ ++.|.++|+++|.|+|||||||.||+
T Consensus 236 ~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~gFvsD~lETL~Eid~E~~~e~a~e~G~~~~~rip~LNd~p~fi~ 315 (359)
T 3hcn_A 236 VWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSK 315 (359)
T ss_dssp EEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTTCCSCCCCCHHHHCHHHHHHHHHHTCCCEEEECCCSTTCHHHHH
T ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCccchhhHHhHHHHHHHHHHHHHHhCCCceEEEcCCCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 58999999988999999999999999
Q ss_pred HHHHHHHHhCCCCCcccccchhhhh
Q 015024 316 DLADAVIESLPYVGAMAVSNLEARQ 340 (414)
Q Consensus 316 ~La~lV~~~l~~~~~~~~~~~~~~~ 340 (414)
+|+++|.+++++-. ..+.+...+|
T Consensus 316 ~La~lv~~~l~~~~-~~~~~~~~~c 339 (359)
T 3hcn_A 316 ALADLVHSHIQSNE-LCSKQLTLSC 339 (359)
T ss_dssp HHHHHHHHHHHHTC-SSCGGGGSCC
T ss_pred HHHHHHHHHHhcCC-ccCcccCCCC
Confidence 99999999887532 2334454554
No 2
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=100.00 E-value=2.2e-91 Score=705.24 Aligned_cols=318 Identities=36% Similarity=0.539 Sum_probs=299.2
Q ss_pred ceEEEEeccccCCcchHHHHHHhhcCCCCcccCCcchhhhHHHHHHHhcCCCchhHHHHHhccCCCCCchHHHHHHHHHH
Q 015024 2 SAFFLFYFVYISASSSLHLRFSQLQVPTDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEEL 81 (414)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~fL~~flsD~rVi~lp~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~qa~~L 81 (414)
.|+||.|||||.+.++|++||+|||+|||||++|++ | |++|+++|+++|++|++++|++|||||||+.+|++|+++|
T Consensus 8 ~gvLL~nlG~P~~~~~V~~fL~~~~~d~~vi~~p~~-~--~~~l~~~I~~~R~~k~~~~Y~~ig~gSPL~~~t~~q~~~L 84 (362)
T 1lbq_A 8 TGIVLMNMGGPSKVEETYDFLYQLFADNDLIPISAK-Y--QKTIAKYIAKFRTPKIEKQYREIGGGSPIRKWSEYQATEV 84 (362)
T ss_dssp EEEEEEECCCCSSGGGHHHHHHHHTTCCSSSCCCSS-S--HHHHHHHHHHHHHHHHHHHHHHTTSSCSHHHHHHHHHHHH
T ss_pred eEEEEEECCCCCCHHHHHHHHHHhccCCccccCCHH-H--HHHHhhhcCccchHHHHHHHHHcCCCCccHHHHHHHHHHH
Confidence 589999999999999999999999999999999986 4 7899999999999999999999999999999999999999
Q ss_pred HHHhhccC---CCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEE
Q 015024 82 RKSLWEKN---LPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTV 158 (414)
Q Consensus 82 ~~~L~~~~---~~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~ 158 (414)
++.|++.+ .+++|++|||||+|++++++++|+++|+++|+++|||||||.+||||+++++.+.+++.+..+.+++++
T Consensus 85 ~~~L~~~~~~~~~~~V~~amry~~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i~i~~ 164 (362)
T 1lbq_A 85 CKILDKTCPETAPHKPYVAFRYAKPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSV 164 (362)
T ss_dssp HHHHHHHCGGGCCEEEEEEESSSSSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEE
T ss_pred HHHHHhhcccCCCceEEeecccCCCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCceEEE
Confidence 99997643 478999999999999999999999999999999999999999999999999999887766667788889
Q ss_pred eCCCCCChHHHHHHHHHHHHHHHhCCCC--CceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEE
Q 015024 159 IPSWYQREGYITAMANLIEKELQNFDSP--EQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTL 236 (414)
Q Consensus 159 i~~~~~~p~yI~a~a~~I~~~l~~~~~~--~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~l 236 (414)
|++||+||.||+|++++|+++++.++.+ ++++|||||||+|++++ ++||||++||++|+++|++++|.. ++|.+
T Consensus 165 i~~~~~~p~~I~ala~~I~~~l~~~~~~~~~~~~llfSaHglP~~~~-~~GDpY~~q~~~ta~ll~e~lg~~---~~~~~ 240 (362)
T 1lbq_A 165 IDRWPTNEGLIKAFSENITKKLQEFPQPVRDKVVLLFSAHSLPMDVV-NTGDAYPAEVAATVYNIMQKLKFK---NPYRL 240 (362)
T ss_dssp ECCCTTCHHHHHHHHHHHHHHHHTSCSTTGGGCEEEEEEECCBHHHH-TTTCSHHHHHHHHHHHHHHHTTTC---SCEEE
T ss_pred ecCCCCCHHHHHHHHHHHHHHHHhcCcccCCCeEEEEecCCCccccc-cCCCcHHHHHHHHHHHHHHHcCCC---CCEEE
Confidence 9999999999999999999999887543 55799999999999999 899999999999999999999864 25999
Q ss_pred EEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCHHHHHH
Q 015024 237 AYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISD 316 (414)
Q Consensus 237 afQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p~fi~~ 316 (414)
+||||+|+.+||+|+|+|+|++| ++|+|+|+|+||||++||+|||||||+|+++.|.++|. |.|+||||+||.||++
T Consensus 241 ~fQSr~G~~~WL~P~t~~~l~~L-~~G~k~vvVvP~gFvsD~lETL~eid~e~~e~~~~~G~--~~~~p~Ln~~p~fi~~ 317 (362)
T 1lbq_A 241 VWQSQVGPKPWLGAQTAEIAEFL-GPKVDGLMFIPIAFTSDHIETLHEIDLGVIGESEYKDK--FKRCESLNGNQTFIEG 317 (362)
T ss_dssp EEECCCSSSCBCSCBHHHHHHHH-GGGCSCEEEECTTCSSCCHHHHTCCCCCCCTTCTTGGG--EEECCCCTTCHHHHHH
T ss_pred EEECCCCCcccCCCCHHHHHHHH-HcCCCeEEEECCeechhhHhhHHHHHHHHHHHHHhCCC--EEEcCCCCCCHHHHHH
Confidence 99999999999999999999999 99999999999999999999999999999999999994 9999999999999999
Q ss_pred HHHHHHHhCCCCC
Q 015024 317 LADAVIESLPYVG 329 (414)
Q Consensus 317 La~lV~~~l~~~~ 329 (414)
|+++|.+++.+..
T Consensus 318 L~~lv~~~l~~~~ 330 (362)
T 1lbq_A 318 MADLVKSHLQSNQ 330 (362)
T ss_dssp HHHHHHHHHHHCC
T ss_pred HHHHHHHHhccCC
Confidence 9999999887543
No 3
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=100.00 E-value=1e-79 Score=609.59 Aligned_cols=298 Identities=27% Similarity=0.432 Sum_probs=276.8
Q ss_pred ceEEEEeccccCCcchHHHHHHhhcCCCCcccCCcchhhhHHHHHHHhcCCCchhHHHHHhccCCCCCchHHHHHHHHHH
Q 015024 2 SAFFLFYFVYISASSSLHLRFSQLQVPTDIIRLPRLFRFLQKPLAQFISVVRAPKSKEGYASIGGGSPLRRITDAQAEEL 81 (414)
Q Consensus 2 ~~~~~~~~~~~~~~~~v~~fL~~flsD~rVi~lp~~~~~~~~~L~~~I~~~R~~k~~~~Y~~IgggSPL~~~T~~qa~~L 81 (414)
.|+||.|||+|.+.++|++||+|+|+|+. +| ++|+++++++|++|||||||+.+|++|+++|
T Consensus 6 ~~vLl~n~G~P~~~~~v~~fL~~~~~~~~---~~---------------~~r~~~~~~~Y~~ig~gSPl~~~t~~q~~~L 67 (310)
T 2h1v_A 6 MGLLVMAYGTPYKEEDIERYYTHIRRGRK---PE---------------PEMLQDLKDRYEAIGGISPLAQITEQQAHNL 67 (310)
T ss_dssp EEEEEEECCCCSSGGGHHHHHHHHTTTCC---CC---------------HHHHHHHHHHHHHTTCSHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCChHHHHHHHHHHhcCCC---CC---------------hHHHHHHHHHHHHCCCCChhHHHHHHHHHHH
Confidence 58999999999999999999999999873 22 3368999999999999999999999999999
Q ss_pred HHHhhccCC--CceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEe
Q 015024 82 RKSLWEKNL--PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVI 159 (414)
Q Consensus 82 ~~~L~~~~~--~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i 159 (414)
++.|+++++ +++|++|||||+|+|+++|++|+++|+++|+++|||||||.+||||+++++.+.+++.+ .+++++|
T Consensus 68 ~~~L~~~~~~~~~~V~~amry~~P~i~~~l~~l~~~G~~~ivvlPl~pq~s~st~g~~~~~i~~~l~~~~---~~~i~~i 144 (310)
T 2h1v_A 68 EQHLNEIQDEITFKAYIGLAHIEPFIEDAVAEMHKDGITEAVSIVLAPHFSTFSVQSYNKRAKEEAEKLG---GLTITSV 144 (310)
T ss_dssp HHHHHHHCSSEEEEEEEEESSSSSBHHHHHHHHHHTTCCEEEEEESSSSCCTTTHHHHHHHHHHHHHHHC---SCEEEEC
T ss_pred HHHHHhcCCCCCceEeehhcCCCCCHHHHHHHHHhcCCCEEEEEECccchhhhhHHHHHHHHHHHHHhCC---CCeEEEe
Confidence 999987654 68999999999999999999999999999999999999999999999999998886543 4689999
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCC--CCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEE
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDS--PEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLA 237 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~--~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~la 237 (414)
++|++||.||+|++++|+++++..+. +++++|||||||+|++++ ++||||++||++|+++|+++++.. +|.++
T Consensus 145 ~~~~~~p~~i~a~a~~i~~~l~~~~~~~~~~~~llfs~HG~P~~~~-~~gDpY~~~~~~t~~~l~e~l~~~----~~~~~ 219 (310)
T 2h1v_A 145 ESWYDEPKFVTYWVDRVKETYASMPEDERENAMLIVSAHSLPEKIK-EFGDPYPDQLHESAKLIAEGAGVS----EYAVG 219 (310)
T ss_dssp CCCTTCHHHHHHHHHHHHHHHHHSCHHHHTSEEEEEEEECCBGGGG-GGTCCHHHHHHHHHHHHHHHHTCS----CEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhcccccCCCceEEEecCCCchhhc-cCCCChHHHHHHHHHHHHHHcCCC----CEEEE
Confidence 99999999999999999999987642 355789999999999999 899999999999999999999862 49999
Q ss_pred EecC-cCCCCCCCCcHHHHHHHHhhc-CCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCHHHHH
Q 015024 238 YQSR-VGPVEWLKPYTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFIS 315 (414)
Q Consensus 238 fQSr-~G~~~WL~P~t~d~L~~L~~~-G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p~fi~ 315 (414)
|||| +|+.+||+|+|+++|++|+++ |+|+|+|+||||++||+|||+|||+|+++.|.++|. +|.|+||||+||.|++
T Consensus 220 fqSrg~g~~~Wl~P~~~~~l~~l~~~~G~k~v~V~P~~F~sD~lEtl~ei~~e~~e~~~~~G~-~~~~~p~ln~~p~~i~ 298 (310)
T 2h1v_A 220 WQSEGNTPDPWLGPDVQDLTRDLFEQKGYQAFVYVPVGFVADHLEVLYDNDYECKVVTDDIGA-SYYRPEMPNAKPEFID 298 (310)
T ss_dssp EESCCCCSSCBSSCBHHHHHHHHHHHHCCSEEEEECTTCCSSCHHHHTTTTTHHHHHHHHHTC-EEECCCCCTTCHHHHH
T ss_pred EEcCCCCCCCcCCCCHHHHHHHHHHHcCCceEEEECCcccccceeeHHHHHHHHHHHHHHcCC-eEEECCCCCCCHHHHH
Confidence 9997 999999999999999999999 999999999999999999999999999999999995 6999999999999999
Q ss_pred HHHHHHHHhCC
Q 015024 316 DLADAVIESLP 326 (414)
Q Consensus 316 ~La~lV~~~l~ 326 (414)
+|+++|.+++.
T Consensus 299 ~l~~~v~~~l~ 309 (310)
T 2h1v_A 299 ALATVVLKKLG 309 (310)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHhc
Confidence 99999998764
No 4
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=100.00 E-value=1.5e-33 Score=272.58 Aligned_cols=229 Identities=17% Similarity=0.160 Sum_probs=181.2
Q ss_pred CCCCCchHH---HHHHHHHHHHHhhccCCCceEEEeeec------------CCCCHHHHHHHHHHcCCCEEEEEecCCcc
Q 015024 65 GGGSPLRRI---TDAQAEELRKSLWEKNLPAKVYVGMRY------------WHPFTEEAIEQIKRDGITKLVVLPLYPQF 129 (414)
Q Consensus 65 gggSPL~~~---T~~qa~~L~~~L~~~~~~~~V~~amry------------~~P~i~e~l~~l~~~G~~~IivlPLyPqy 129 (414)
+.||.-.+. -+++++++++.+ ++++|++||.+ ++|++++++++|+++|+++|+|+||||.
T Consensus 16 ~hGS~~~~~~~~~~~~~~~l~~~~----~~~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~~G~~~ivV~Pl~l~- 90 (269)
T 2xvy_A 16 AFGTSVEEARPALDKMGDRVRAAH----PDIPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAEEGFTHVAVQSLHTI- 90 (269)
T ss_dssp ECCCCCTTTTHHHHHHHHHHHHHC----TTSCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHHTTCCEEEEEECCSS-
T ss_pred eCCCCcHHHHHHHHHHHHHHHHHC----CCCeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHHCCCCEEEEEeceee-
Confidence 555544333 334445555444 46899999997 8999999999999999999999999983
Q ss_pred cccchHHHHHHHHHH---HHhccccCCcceEEeCCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhccc
Q 015024 130 SISTSGSSLRLLESI---FREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEA 206 (414)
Q Consensus 130 S~~Ttgs~~~~~~e~---~~~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~ 206 (414)
+|+.++++.+. +++.+. ...+++++++|++||.|+++++++|++++.... +++..||||+||+|. .
T Consensus 91 ----~G~~~~di~~~~~~l~~~~~-~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~~~-~~~~~lll~~HGs~~-----~ 159 (269)
T 2xvy_A 91 ----PGEEFHGLLETAHAFQGLPK-GLTRVSVGLPLIGTTADAEAVAEALVASLPADR-KPGEPVVFMGHGTPH-----P 159 (269)
T ss_dssp ----SSHHHHHHHHHHHHHTTCTT-SCSEEEEECCSSCSHHHHHHHHHHHHHHSCTTC-CTTCCEEEEECCCSS-----G
T ss_pred ----ccHhHHHHHHHHHHHHHhhc-cCCeEEEeCCCCCCHHHHHHHHHHHHHhchhhc-cCCceEEEEECCCCh-----h
Confidence 56678888877 543321 125789999999999999999999999885421 234579999999995 3
Q ss_pred CCchHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEccccc-ccchh--hHH
Q 015024 207 GDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFV-SEHIE--TLE 283 (414)
Q Consensus 207 GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFv-sD~lE--Tl~ 283 (414)
||++.. ++++++++ ++ ..+|+ |+.+| +|+++++|++|.++|+|+|+|+|++|+ .||+| +.+
T Consensus 160 ~~~~~~---~~a~~l~~-~~--------~~~~~---g~~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~~G~h~~~di~~ 223 (269)
T 2xvy_A 160 ADICYP---GLQYYLWR-LD--------PDLLV---GTVEG-SPSFDNVMAELDVRKAKRVWLMPLMAVAGDHARNDMAG 223 (269)
T ss_dssp GGGHHH---HHHHHHHT-TC--------TTEEE---EESSS-SSCHHHHHHHHHHHTCSEEEEEEESSSCCHHHHTTTTC
T ss_pred hccHHH---HHHHHHHh-cC--------CCEEE---EEcCC-CCCHHHHHHHHHHCCCCEEEEECCccccccchhhhcCC
Confidence 555433 46667754 32 13554 44678 899999999999999999999999977 59999 778
Q ss_pred HHHHHHHHHHHhcCCeeEEEcCCCCCCHHHHHHHHHHHHHhC
Q 015024 284 EIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESL 325 (414)
Q Consensus 284 Eid~e~~e~a~~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l 325 (414)
|++.++++.+.++|++.+.++||||+||.|++++++++.+.+
T Consensus 224 ~~~~~~~~~~~~~g~~~~~~~~~Lg~~p~~~~~l~~~~~~a~ 265 (269)
T 2xvy_A 224 DEDDSWTSQLARRGIEAKPVLHGTAESDAVAAIWLRHLDDAL 265 (269)
T ss_dssp SSTTSHHHHHHHTTCEEEECCCCGGGCHHHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHcCcEEEEecCCCCCCHHHHHHHHHHHHHHH
Confidence 888999999999999877799999999999999999998865
No 5
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=99.97 E-value=1.8e-30 Score=269.42 Aligned_cols=238 Identities=13% Similarity=0.102 Sum_probs=195.7
Q ss_pred cCCCCCchHHHHHHHHHHHHHhhccCC-----CceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHH
Q 015024 64 IGGGSPLRRITDAQAEELRKSLWEKNL-----PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSL 138 (414)
Q Consensus 64 IgggSPL~~~T~~qa~~L~~~L~~~~~-----~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~ 138 (414)
+|.|||+...++++.++|++.+.+.+. ...|++||..+.|+++++|++| |+++|+|+|+|++++. ++.
T Consensus 9 VgHGSp~~~~a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle~~PsI~eaL~~L---G~~rVvVvPLfl~~G~----H~~ 81 (474)
T 2jh3_A 9 IGHGSHHHGESARATQQVAEALRGRGLAGHLPYDEVLEGYWQQEPGLRQVLRTV---AYSDVTVVPVFLSEGY----VTE 81 (474)
T ss_dssp EECCCSSCTHHHHHHHHHHHHHHHHHHTTCCSCSEEEEEESSSSSBTTTGGGGC---CBSEEEEEECCSCCSH----HHH
T ss_pred EeCCCCCChhHHHHHHHHHHHHHHhCCccccCCCeEEEEEcCCCCCHHHHHHHc---CcCeEEEEEEehhccH----hHH
Confidence 488999999999999999999876554 6789999988999999999999 9999999999987554 455
Q ss_pred HHHHHHHHhcc-----------ccCCcceEEeCCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccC
Q 015024 139 RLLESIFREDE-----------YLVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAG 207 (414)
Q Consensus 139 ~~~~e~~~~~~-----------~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~G 207 (414)
+++.+.+.... ..+.+.++++++|++||.|+++++++|+++++.-..++++.|||.+
T Consensus 82 ~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~g~~~~~~avvlvg------------ 149 (474)
T 2jh3_A 82 TVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPEGTDPADVTLLLLA------------ 149 (474)
T ss_dssp THHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCTTCCGGGCEEEEEE------------
T ss_pred HHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhhccCcccceEEEec------------
Confidence 57776664321 2456688999999999999999999999988651123455677755
Q ss_pred Cc-hHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCC-----CCCCCCcHHHHHHHHhhcCCceEEEEcccccccchhh
Q 015024 208 DP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGP-----VEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIET 281 (414)
Q Consensus 208 Dp-Y~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~-----~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lET 281 (414)
|| |..+|.+++++|+++++.. +|.++|||+ +| .+||+|++++++++| |+|+|+|+|+ |++||++|
T Consensus 150 dp~a~~~~~~la~~L~e~lg~~----~v~vaf~s~-~Pwl~P~~~wleP~l~d~l~~L---G~krVvV~P~-Fl~dG~h~ 220 (474)
T 2jh3_A 150 ARPGNAALETHAQALRERGQFA----GVEVVLESR-EALTPESHAASAVPLSEWPSRV---EAGQAVLVPF-LTHLGKHA 220 (474)
T ss_dssp SSTTCHHHHHHHHHHHHHCCSS----EEEEEECCC-C---------CCEEGGGGGGGC---CSSCEEEEEC-SSCCCHHH
T ss_pred CchHHHHHHHHHHHHHHhcCCC----cEEEEEEeC-CCCCCcccccccCCHHHHHHHc---CCCeEEEEEe-eccCCcch
Confidence 45 6899999999999999753 389999998 54 568888999999988 9999988887 99999999
Q ss_pred HHHHHHHHHHHHHh--cCCeeEEEcCCCCCCHHHHHHHHHHHHHhCCCCCc
Q 015024 282 LEEIDVEYKELALK--SGIEKWGRVPALGCEATFISDLADAVIESLPYVGA 330 (414)
Q Consensus 282 l~Eid~e~~e~a~~--~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~~~~~ 330 (414)
++||+.+.++.... .|. ++.++++||++|.+++++++++.+.+.+..+
T Consensus 221 ~~DI~~~~~~~~~~~p~G~-~v~~~~~LG~~p~~~~ll~~rv~eal~~~~~ 270 (474)
T 2jh3_A 221 AERLQQALAQAAERFPQAP-PLHVGGPVGEHPAVAEVVLALAAEGREDERG 270 (474)
T ss_dssp HHHHHHHHHHHHHHCTTCC-CEEECCCGGGSTTHHHHHHHHHHTTCSCSCC
T ss_pred HHHHHHHHHHHHHhccCCc-EEEecCCCCCCHHHHHHHHHHHHHHHhcCCC
Confidence 99999998766655 355 6899999999999999999999999877644
No 6
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=99.94 E-value=8.8e-26 Score=218.19 Aligned_cols=230 Identities=12% Similarity=0.153 Sum_probs=180.3
Q ss_pred CCCCCchHHHHHHHHHHHHHhhccCCCceEEEee-----------ec--CCCCHHHHHHHHHHcCCCEEEEEecCCcccc
Q 015024 65 GGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGM-----------RY--WHPFTEEAIEQIKRDGITKLVVLPLYPQFSI 131 (414)
Q Consensus 65 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am-----------ry--~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~ 131 (414)
+.||...+..++..+++.+.+.+..++++|++|| || ..|+++++|++|.++|+++|+|+|||+
T Consensus 9 ~hGSr~~~~~~~~~~~~~~~v~~~~p~~~V~~af~s~~i~~~l~~~~g~~~psi~~aL~~l~~~G~~~vvV~Pl~l---- 84 (264)
T 2xwp_A 9 SFGTSYHDTCEKNIVACERDLAASCPDRDLFRAFTSGMIIRKLRQRDGIDIDTPLQALQKLAAQGYQDVAIQSLHI---- 84 (264)
T ss_dssp ECCCSCHHHHHHHHHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHCCCCCCHHHHHHHHHHHTCCEEEEEECCS----
T ss_pred ECCCCCHHHHHHHHHHHHHHHHHHCCCCeEEeehhhHHHHHHHHHhcCCCCCCHHHHHHHHHhCCCCEEEEEeCcc----
Confidence 6788777766634455555555544578999999 34 459999999999999999999999997
Q ss_pred cchHHHHHHHHHHHHhccc-cCCcceEEeCCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCch
Q 015024 132 STSGSSLRLLESIFREDEY-LVNMQHTVIPSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPY 210 (414)
Q Consensus 132 ~Ttgs~~~~~~e~~~~~~~-~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY 210 (414)
++|+..+++.+.+++.+. ++ ++++.++++.||.+++++++.|.+.+... +++..|||++||.|.. +++|
T Consensus 85 -~~G~~~~di~~~v~~~~~~~~--~i~~~~pl~~~~~~~~~l~~~l~~~~~~~--~~~~~lvl~gHGs~~~-----~~~~ 154 (264)
T 2xwp_A 85 -INGDEYEKIVREVQLLRPLFT--RLTLGVPLLSSHNDYVQLMQALRQQMPSL--RQTEKVVFMGHGASHH-----AFAA 154 (264)
T ss_dssp -SSSHHHHHHHHHHHHHGGGCS--EEEEECCSSCSHHHHHHHHHHHHTTSCCC--CTTEEEEEEECCCSSG-----GGHH
T ss_pred -cCcHHHHHHHHHHHHHHhhCC--ceEEecCCCCCHHHHHHHHHHHHHhcccc--CCCCeEEEEECCCCch-----hhHH
Confidence 466777788887765432 24 67899999999999999999998876532 2456899999999743 3443
Q ss_pred HHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEcccccc-cchhhHHHHHHH-
Q 015024 211 KAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVS-EHIETLEEIDVE- 288 (414)
Q Consensus 211 ~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFvs-D~lETl~Eid~e- 288 (414)
..++++.+.+. +. ++.++| .+| +|++++++++|.++|+|+|+|+|+.|++ ||+ ..||..+
T Consensus 155 ---~~~~a~~l~~~-~~-----~v~~g~------~e~-~P~~~~~l~~l~~~G~~~v~v~P~~l~aG~h~--~~Di~~~~ 216 (264)
T 2xwp_A 155 ---YACLDHMMTAQ-RF-----PARVGA------VES-YPEVDILIDSLRDEGVTGVHLMPLMLVAGDHA--INDMASDD 216 (264)
T ss_dssp ---HHHHHHHHHHT-TC-----SEEEEE------SSS-SSCHHHHHHHHHHHTCCEEEEEECSSCCCHHH--HHHHHSSS
T ss_pred ---HHHHHHHHHhh-CC-----CEEEEE------eCC-CCCHHHHHHHHHHCCCCEEEEEeeecccCcch--hhhccccc
Confidence 34555556553 21 254444 567 9999999999999999999999999888 998 5577655
Q ss_pred ---HHHHHHhcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCC
Q 015024 289 ---YKELALKSGIEKWGRVPALGCEATFISDLADAVIESLP 326 (414)
Q Consensus 289 ---~~e~a~~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~ 326 (414)
.++.+.+.|++...++++||+||.+++.+.+++.+.+.
T Consensus 217 ~d~~~~~~~~~g~~~~~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 217 GDSWKMRFNAAGIPATPWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp TTSHHHHHHHTTCCEEECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred hhHHHHHHHHcCCeEEEeccCCCCCHHHHHHHHHHHHHHHh
Confidence 67888888987666899999999999999999998875
No 7
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=99.13 E-value=3.1e-10 Score=97.02 Aligned_cols=111 Identities=14% Similarity=0.202 Sum_probs=86.2
Q ss_pred cCCCCCchHHHHHHHHHHHHHhhccCCCceEEEee-ecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHH
Q 015024 64 IGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGM-RYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 64 IgggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am-ry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
+|.||+-...+ +..+.+.+.+.++. ..|+.|+ .++.|++++++++|+++|+++|+++|+|.. ...++.++++
T Consensus 11 v~HGS~~~~~~-~~~~~l~~~l~~~~--~~V~~a~le~~~P~l~~~l~~l~~~G~~~vvvvPlfl~----~G~H~~~Dip 83 (126)
T 3lyh_A 11 LAHGSSDARWC-ETFEKLAEPTVESI--ENAAIAYMELAEPSLDTIVNRAKGQGVEQFTVVPLFLA----AGRHLRKDVP 83 (126)
T ss_dssp EECCCSCHHHH-HHHHHHHHHHHHHS--TTCEEEESSSSSSBHHHHHHHHHHTTCCEEEEEECCSC----CCHHHHHHHH
T ss_pred EeCCCCCHHHH-HHHHHHHHHHHhhc--CCEEEEEEeCCCCCHHHHHHHHHHcCCCEEEEEecccC----CCchhhhHHH
Confidence 37888865443 34566666665544 3688885 689999999999999999999999999974 4467777777
Q ss_pred HHHHhcc-ccCCcceEEeCCCCCChHHHHHHHHHHHHHHHh
Q 015024 143 SIFREDE-YLVNMQHTVIPSWYQREGYITAMANLIEKELQN 182 (414)
Q Consensus 143 e~~~~~~-~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~ 182 (414)
+.++..+ .+ ++++++.++++.||.++++++++|++++..
T Consensus 84 ~~~~~~~~~~-~~~i~~~~~LG~~p~l~~~l~~ri~~al~~ 123 (126)
T 3lyh_A 84 AMIERLEAEH-GVTIRLAEPIGKNPRLGLAIRDVVKEELER 123 (126)
T ss_dssp HHHHHHHHHH-TCEEEECCCGGGSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh-CceEEEcCCCCCChHHHHHHHHHHHHHHhc
Confidence 6664322 12 567888999999999999999999999864
No 8
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=99.08 E-value=3.5e-10 Score=97.12 Aligned_cols=110 Identities=17% Similarity=0.159 Sum_probs=83.0
Q ss_pred cCCCCCchHHHHHHHHHHHHHhhccCCCceEEEe-eec-CCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHH
Q 015024 64 IGGGSPLRRITDAQAEELRKSLWEKNLPAKVYVG-MRY-WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLL 141 (414)
Q Consensus 64 IgggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~a-mry-~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~ 141 (414)
+|.||+-...+ +..+++.+.|.++.....|+.| |.| +.|++++++++| |+++|+|+|+|+++ ..++.+++
T Consensus 9 v~HGS~~~~~~-~~~~~la~~l~~~~~~~~V~~a~le~~~~Psl~~~l~~l---g~~~v~v~Plfl~~----G~h~~~di 80 (133)
T 2xws_A 9 VGHGSQLNHYR-EVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISY----GLHVTEDL 80 (133)
T ss_dssp EECSCCCHHHH-HHHHHHHHHHHHHTSSSEEEEEESSTTCSSCHHHHHHHC---CCSEEEEEECCSSC----CHHHHTHH
T ss_pred EECCCCCHHHH-HHHHHHHHHHHhhCCCCcEEeeeeecCCCCCHHHHHHHc---CCCEEEEEeeeeCC----CcchHhHH
Confidence 37788765433 3445566666554445789999 468 999999999999 99999999999764 34555677
Q ss_pred HHHHHhcc-------ccCCcceEEeCCCCCChHHHHHHHHHHHHHHH
Q 015024 142 ESIFREDE-------YLVNMQHTVIPSWYQREGYITAMANLIEKELQ 181 (414)
Q Consensus 142 ~e~~~~~~-------~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~ 181 (414)
.+.+.... ..+.+++++.++++.||.++++++++|+++++
T Consensus 81 ~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~ 127 (133)
T 2xws_A 81 PDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGR 127 (133)
T ss_dssp HHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC-
T ss_pred HHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhc
Confidence 77664322 34567888999999999999999999988764
No 9
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=99.08 E-value=2.9e-10 Score=101.20 Aligned_cols=110 Identities=17% Similarity=0.156 Sum_probs=80.5
Q ss_pred CCCCCchHHHHHHHHHHHHHhhccCCCceEEEe-eec-CCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHH
Q 015024 65 GGGSPLRRITDAQAEELRKSLWEKNLPAKVYVG-MRY-WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 65 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~a-mry-~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.||+-...+ +..+++.+.|.++.....|++| |.| +.|++++++++| |+++|+|+|+|+++. .++.++++
T Consensus 31 ~HGS~~p~~~-~~~~~la~~l~~~~~~~~V~~afle~~~~Psl~~~l~~l---G~~~VvVvPlfL~~G----~h~~~DIp 102 (156)
T 1tjn_A 31 GHGSQLNHYR-EVMELHRKRIEESGAFDEVKIAFAARKRRPMPDEAIREM---NCDIIYVVPLFISYG----LHVTEDLP 102 (156)
T ss_dssp ECCTTSTTHH-HHHHHHHHHHHHHTSSSEEEEEECSSSCSSCHHHHHHHC---CCSEEEEEECCSSCS----HHHHTHHH
T ss_pred ECCCCCHHHH-HHHHHHHHHHHhhCCCCeEEEEEecCCCCCCHHHHHHHc---CCCEEEEEechhcCC----chhHhHHH
Confidence 7778753322 2233444444443335789999 578 999999999999 999999999998644 45556777
Q ss_pred HHHHhcc-------ccCCcceEEeCCCCCChHHHHHHHHHHHHHHHh
Q 015024 143 SIFREDE-------YLVNMQHTVIPSWYQREGYITAMANLIEKELQN 182 (414)
Q Consensus 143 e~~~~~~-------~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~~ 182 (414)
+.+.... ..+.+++++.++++.||.++++++++|+++++.
T Consensus 103 ~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 103 DLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp HHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred HHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 7664332 346678899999999999999999999987654
No 10
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=98.91 E-value=2.1e-08 Score=85.49 Aligned_cols=116 Identities=20% Similarity=0.335 Sum_probs=91.3
Q ss_pred eEEEEeecCChhhhhcccCCc-hHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceE
Q 015024 189 VMIFFSAHGVPLAYVEEAGDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 267 (414)
Q Consensus 189 ~~LlfSaHgiP~~~i~~~GDp-Y~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~V 267 (414)
..+|+.+||.+ || ....+.+.++.++++. . ++.++|-. +-.|+++++|++|.++|+++|
T Consensus 6 ~alllv~HGS~--------~~~~~~~~~~l~~~l~~~~--~----~V~~a~le------~~~P~l~~~l~~l~~~G~~~v 65 (126)
T 3lyh_A 6 HQIILLAHGSS--------DARWCETFEKLAEPTVESI--E----NAAIAYME------LAEPSLDTIVNRAKGQGVEQF 65 (126)
T ss_dssp EEEEEEECCCS--------CHHHHHHHHHHHHHHHHHS--T----TCEEEESS------SSSSBHHHHHHHHHHTTCCEE
T ss_pred cEEEEEeCCCC--------CHHHHHHHHHHHHHHHhhc--C----CEEEEEEe------CCCCCHHHHHHHHHHcCCCEE
Confidence 47999999994 33 3456677777777765 1 37899864 347999999999999999999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCC
Q 015024 268 LAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLP 326 (414)
Q Consensus 268 vVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~ 326 (414)
+|+|. |+.....+..||..+..+...+.|. ++.+.+.|+.+|.+++.+++++.+.+.
T Consensus 66 vvvPl-fl~~G~H~~~Dip~~~~~~~~~~~~-~i~~~~~LG~~p~l~~~l~~ri~~al~ 122 (126)
T 3lyh_A 66 TVVPL-FLAAGRHLRKDVPAMIERLEAEHGV-TIRLAEPIGKNPRLGLAIRDVVKEELE 122 (126)
T ss_dssp EEEEC-CSCCCHHHHHHHHHHHHHHHHHHTC-EEEECCCGGGSHHHHHHHHHHHHHHHH
T ss_pred EEEec-ccCCCchhhhHHHHHHHHHHHHhCc-eEEEcCCCCCChHHHHHHHHHHHHHHh
Confidence 99997 5555566678888777766555555 588999999999999999999998753
No 11
>2xws_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; 1.60A {Archaeoglobus fulgidus} PDB: 2dj5_A* 2xwq_A
Probab=98.74 E-value=5.4e-08 Score=83.34 Aligned_cols=118 Identities=18% Similarity=0.156 Sum_probs=88.3
Q ss_pred eEEEEeecCChhhhhcccCCc-hHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceE
Q 015024 189 VMIFFSAHGVPLAYVEEAGDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 267 (414)
Q Consensus 189 ~~LlfSaHgiP~~~i~~~GDp-Y~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~V 267 (414)
..+|+.+||.. || ....+.+.++.++++++. .++.++|-+- |-.|+++++|++| |+++|
T Consensus 4 ~alllv~HGS~--------~~~~~~~~~~la~~l~~~~~~----~~V~~a~le~-----~~~Psl~~~l~~l---g~~~v 63 (133)
T 2xws_A 4 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESGAF----DEVKIAFAAR-----KRRPMPDEAIREM---NCDII 63 (133)
T ss_dssp EEEEEEECSCC--------CHHHHHHHHHHHHHHHHHTSS----SEEEEEESST-----TCSSCHHHHHHHC---CCSEE
T ss_pred ceEEEEECCCC--------CHHHHHHHHHHHHHHHhhCCC----CcEEeeeeec-----CCCCCHHHHHHHc---CCCEE
Confidence 46999999993 22 344667777888887642 2478999773 2379999999999 99999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHH------hcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 015024 268 LAVPISFVSEHIETLEEIDVEYKELAL------KSGIEKWGRVPALGCEATFISDLADAVIESLPY 327 (414)
Q Consensus 268 vVvP~gFvsD~lETl~Eid~e~~e~a~------~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~~ 327 (414)
+|+|. |++...+|..||..+..+... +....++.+.+.|+++|.+++.+++++.+.+..
T Consensus 64 ~v~Pl-fl~~G~h~~~di~~~~~~~~~~~s~~~~~~~~~i~~~~pLg~~p~~~~~l~~ri~~a~~~ 128 (133)
T 2xws_A 64 YVVPL-FISYGLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 128 (133)
T ss_dssp EEEEC-CSSCCHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTSHHHHHHHHHHHHCCC--
T ss_pred EEEee-eeCCCcchHhHHHHHHHHhhccccccccCCCceEEEcCCCCCCHHHHHHHHHHHHHhhcC
Confidence 99997 666677777787666554322 233446889999999999999999999887643
No 12
>1tjn_A Sirohydrochlorin cobaltochelatase; AF0721, APC5049, midwest consortium for structural genomics, structure initiative, A. fulgidus; 2.01A {Archaeoglobus fulgidus} SCOP: c.92.1.3
Probab=98.49 E-value=8.1e-07 Score=78.78 Aligned_cols=118 Identities=16% Similarity=0.124 Sum_probs=86.0
Q ss_pred eEEEEeecCChhhhhcccCCc-hHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceE
Q 015024 189 VMIFFSAHGVPLAYVEEAGDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 267 (414)
Q Consensus 189 ~~LlfSaHgiP~~~i~~~GDp-Y~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~V 267 (414)
..||+.+||.+ || ....+.+.++.++++++. .++.+||-+-.+ +|+++++|++| |+++|
T Consensus 25 ~avlLv~HGS~--------~p~~~~~~~~la~~l~~~~~~----~~V~~afle~~~-----~Psl~~~l~~l---G~~~V 84 (156)
T 1tjn_A 25 RGLVIVGHGSQ--------LNHYREVMELHRKRIEESGAF----DEVKIAFAARKR-----RPMPDEAIREM---NCDII 84 (156)
T ss_dssp EEEEEEECCTT--------STTHHHHHHHHHHHHHHHTSS----SEEEEEECSSSC-----SSCHHHHHHHC---CCSEE
T ss_pred cCEEEEECCCC--------CHHHHHHHHHHHHHHHhhCCC----CeEEEEEecCCC-----CCCHHHHHHHc---CCCEE
Confidence 57999999993 33 455677888888887642 247899976312 69999999999 99999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHH------hcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 015024 268 LAVPISFVSEHIETLEEIDVEYKELAL------KSGIEKWGRVPALGCEATFISDLADAVIESLPY 327 (414)
Q Consensus 268 vVvP~gFvsD~lETl~Eid~e~~e~a~------~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~~ 327 (414)
+|+|..++. -..|..||..+..+... +....++.+.+.|+++|.+++.+++++.+.+..
T Consensus 85 vVvPlfL~~-G~h~~~DIp~~l~~~~~~~sw~~~~~~~~i~~~~pLG~~p~l~~~l~~ri~ea~~~ 149 (156)
T 1tjn_A 85 YVVPLFISY-GLHVTEDLPDLLGFPRGRGIKEGEFEGKKVVICEPIGEDYFVTYAILNSVFRIGRD 149 (156)
T ss_dssp EEEECCSSC-SHHHHTHHHHHHTCCCSSSCEEEEETTEEEEECCCSTTCHHHHHHHHHHHHCCC--
T ss_pred EEEechhcC-CchhHhHHHHHHHHHHhcccccccCCCceEEEeCCCCCCHHHHHHHHHHHHHHHhc
Confidence 999976433 33445677665554222 233446889999999999999999999987654
No 13
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=98.38 E-value=1.1e-06 Score=84.40 Aligned_cols=106 Identities=14% Similarity=0.204 Sum_probs=79.9
Q ss_pred CCCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHH
Q 015024 65 GGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESI 144 (414)
Q Consensus 65 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~ 144 (414)
|.|||.. .......++..|.+.+. .|++|+--|.|++++++++|.+.|+++|+|+|++ .++..++.+++...
T Consensus 144 gHGs~~~--~~~~~~~~a~~l~~~~~--~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~----l~aG~h~~~Di~~~ 215 (264)
T 2xwp_A 144 GHGASHH--AFAAYACLDHMMTAQRF--PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLM----LVAGDHAINDMASD 215 (264)
T ss_dssp ECCCSSG--GGHHHHHHHHHHHHTTC--SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECS----SCCCHHHHHHHHSS
T ss_pred ECCCCch--hhHHHHHHHHHHHhhCC--CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeee----cccCcchhhhcccc
Confidence 8899876 23344566666766552 7899997789999999999999999999999998 45557777776532
Q ss_pred --------HHhccccCCcceEEeCCCCCChHHHHHHHHHHHHHHH
Q 015024 145 --------FREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQ 181 (414)
Q Consensus 145 --------~~~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~ 181 (414)
+.+. ..++. .++++.++||.+++++.+++++++.
T Consensus 216 ~~d~~~~~~~~~--g~~~~-~~~~~LG~~p~i~~~~~~r~~ea~~ 257 (264)
T 2xwp_A 216 DGDSWKMRFNAA--GIPAT-PWLSGLGENPAIRAMFVAHLHQALN 257 (264)
T ss_dssp STTSHHHHHHHT--TCCEE-ECCCCGGGCHHHHHHHHHHHHHHHC
T ss_pred chhHHHHHHHHc--CCeEE-EeccCCCCCHHHHHHHHHHHHHHHh
Confidence 2211 12222 2579999999999999999999874
No 14
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=98.35 E-value=5.6e-06 Score=79.20 Aligned_cols=126 Identities=13% Similarity=0.168 Sum_probs=92.1
Q ss_pred ceEEEEeecCChhhhhcccCCc-hHHHHHHHHHHHHHHhccccCCCCEEEEEecCc-----CCCCCCCCcHHHHHHHHhh
Q 015024 188 QVMIFFSAHGVPLAYVEEAGDP-YKAEMEECVDLIMEELEKRKITNAYTLAYQSRV-----GPVEWLKPYTDETIIKLGQ 261 (414)
Q Consensus 188 ~~~LlfSaHgiP~~~i~~~GDp-Y~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~-----G~~~WL~P~t~d~L~~L~~ 261 (414)
+..+|+.+||. + || ....+.+.++.++++++. .++..||-|+. -...|-.|++.++|++|.+
T Consensus 9 ~~aillv~hGS--~------~~~~~~~~~~~~~~l~~~~~~----~~V~~af~~~~i~~~l~~~~~~~P~i~~al~~l~~ 76 (269)
T 2xvy_A 9 KTGILLVAFGT--S------VEEARPALDKMGDRVRAAHPD----IPVRWAYTAKMIRAKLRAEGIAAPSPAEALAGMAE 76 (269)
T ss_dssp CEEEEEEECCC--C------CTTTTHHHHHHHHHHHHHCTT----SCEEEEESCHHHHHHHHHTTCCCCCHHHHHHHHHH
T ss_pred CceEEEEeCCC--C------cHHHHHHHHHHHHHHHHHCCC----CeEEeehhhHHHHHHHHHcCCCCCCHHHHHHHHHH
Confidence 45799999999 2 22 445777888888888642 24889998731 0012568999999999999
Q ss_pred cCCceEEEEcccccccchhhHHHHHHHHHHHHH-hcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 015024 262 KGVKSLLAVPISFVSEHIETLEEIDVEYKELAL-KSGIEKWGRVPALGCEATFISDLADAVIESLPY 327 (414)
Q Consensus 262 ~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~-~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~~ 327 (414)
+|+++|+|+|...++.. +..+|.....++.. ..+...+..++++.+||.+++++++.+.+.+..
T Consensus 77 ~G~~~ivV~Pl~l~~G~--~~~di~~~~~~l~~~~~~~~~i~~~~pl~~~p~~i~~la~~i~~~~~~ 141 (269)
T 2xvy_A 77 EGFTHVAVQSLHTIPGE--EFHGLLETAHAFQGLPKGLTRVSVGLPLIGTTADAEAVAEALVASLPA 141 (269)
T ss_dssp TTCCEEEEEECCSSSSH--HHHHHHHHHHHHTTCTTSCSEEEEECCSSCSHHHHHHHHHHHHHHSCT
T ss_pred CCCCEEEEEeceeeccH--hHHHHHHHHHHHHHhhccCCeEEEeCCCCCCHHHHHHHHHHHHHhchh
Confidence 99999999998866654 35566554322321 122356899999999999999999999998753
No 15
>2h1v_A Ferrochelatase; rossman fold, PI-helix, lyase; 1.20A {Bacillus subtilis} PDB: 2hk6_A 1c1h_A* 1ld3_A 1n0i_A 1ak1_A 3goq_A 1doz_A 2q2n_A* 3m4z_A 2h1w_A 2ac2_A 2q3j_A* 2ac4_A 2q2o_A* 1c9e_A* 2c8j_A
Probab=98.03 E-value=3.5e-05 Score=75.62 Aligned_cols=112 Identities=15% Similarity=0.197 Sum_probs=74.8
Q ss_pred ecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEccc-
Q 015024 195 AHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPIS- 273 (414)
Q Consensus 195 aHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~g- 273 (414)
.||.|+... -..|+++..+.+.++-+ +.+.++.+++ |.+ .|+++|+|++|.++|+++|+|+|..
T Consensus 51 g~gSPl~~~------t~~q~~~L~~~L~~~~~--~~~~~V~~am--ry~-----~P~i~~~l~~l~~~G~~~ivvlPl~p 115 (310)
T 2h1v_A 51 GGISPLAQI------TEQQAHNLEQHLNEIQD--EITFKAYIGL--AHI-----EPFIEDAVAEMHKDGITEAVSIVLAP 115 (310)
T ss_dssp TCSHHHHHH------HHHHHHHHHHHHHHHCS--SEEEEEEEEE--SSS-----SSBHHHHHHHHHHTTCCEEEEEESSS
T ss_pred CCCChhHHH------HHHHHHHHHHHHHhcCC--CCCceEeehh--cCC-----CCCHHHHHHHHHhcCCCEEEEEECcc
Confidence 477776654 13334444444433210 0011255665 553 7999999999999999999999987
Q ss_pred ----ccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 015024 274 ----FVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIESLPY 327 (414)
Q Consensus 274 ----FvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~~ 327 (414)
+++.+. ..++....++ .+...+..++.+.+||.+|+++++.|.+++..
T Consensus 116 q~s~st~g~~--~~~i~~~l~~----~~~~~i~~i~~~~~~p~~i~a~a~~i~~~l~~ 167 (310)
T 2h1v_A 116 HFSTFSVQSY--NKRAKEEAEK----LGGLTITSVESWYDEPKFVTYWVDRVKETYAS 167 (310)
T ss_dssp SCCTTTHHHH--HHHHHHHHHH----HCSCEEEECCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred chhhhhHHHH--HHHHHHHHHh----CCCCeEEEeCCCCCCHHHHHHHHHHHHHHHHh
Confidence 344433 4555444433 33457999999999999999999999987643
No 16
>2jh3_A Ribosomal protein S2-related protein; CBIX, SAD phasing, structural genomics, chelatase super-family fold, 4Fe-4S iron-sulphur cluster; 1.9A {Deinococcus radiodurans}
Probab=97.75 E-value=2.7e-05 Score=80.81 Aligned_cols=122 Identities=13% Similarity=0.096 Sum_probs=84.3
Q ss_pred eEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccC-CCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceE
Q 015024 189 VMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKI-TNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSL 267 (414)
Q Consensus 189 ~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~-~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~V 267 (414)
..||+.+||.|.... -+.++.+.++.++++.+.... ..++.++|-+ -.|++.++|++| |+++|
T Consensus 4 ~alLLVgHGSp~~~~------a~~~i~~La~~l~~~~~~~~L~~~~V~~Afle-------~~PsI~eaL~~L---G~~rV 67 (474)
T 2jh3_A 4 RSLVLIGHGSHHHGE------SARATQQVAEALRGRGLAGHLPYDEVLEGYWQ-------QEPGLRQVLRTV---AYSDV 67 (474)
T ss_dssp CEEEEEECCCSSCTH------HHHHHHHHHHHHHHHHHTTCCSCSEEEEEESS-------SSSBTTTGGGGC---CBSEE
T ss_pred ceEEEEeCCCCCChh------HHHHHHHHHHHHHHhCCccccCCCeEEEEEcC-------CCCCHHHHHHHc---CcCeE
Confidence 369999999974321 345566667777665431000 1247788876 279999999998 99999
Q ss_pred EEEcccccccchhhHHHHHHHHHHHHH----------hcCCeeEEEcCCCCCCHHHHHHHHHHHHHhCCC
Q 015024 268 LAVPISFVSEHIETLEEIDVEYKELAL----------KSGIEKWGRVPALGCEATFISDLADAVIESLPY 327 (414)
Q Consensus 268 vVvP~gFvsD~lETl~Eid~e~~e~a~----------~~G~~~~~~vp~lNd~p~fi~~La~lV~~~l~~ 327 (414)
+|+|.. ++....+-.||..+..+... ..++..+.+++.|++||.+++++++.+.+.+..
T Consensus 68 vVvPLf-l~~G~H~~~DIp~~l~~~~~~~dsw~~~~~~~p~~~I~~~~pLG~~P~lie~la~rI~eal~~ 136 (474)
T 2jh3_A 68 TVVPVF-LSEGYVTETVLPRELGLGHQGPVPTGGVVRVLGGRRVRYTRPLGAHPGMADAIAAQARDTLPE 136 (474)
T ss_dssp EEEECC-SCCSHHHHTHHHHHHTCCCCSCCCTTCEEEEETTEEEEECCCGGGSTTHHHHHHHHHHHHSCT
T ss_pred EEEEEe-hhccHhHHHHHHHHHHHhhhccccchhhhhhcCCceEEEeCccCCCHHHHHHHHHHHHHHHhh
Confidence 999965 34444555566555443211 234456899999999999999999999998754
No 17
>2bhw_A Chlorophyll A-B binding protein AB80; LHC-II, photosynthesis, light-harvesting, membrane protein, chloroplast, chromophore, membrane; HET: LUX NEX XAT CLA CHL LHG DGD; 2.50A {Pisum sativum} PDB: 1vcr_A* 1rwt_A*
Probab=97.73 E-value=1.5e-05 Score=75.20 Aligned_cols=35 Identities=31% Similarity=0.474 Sum_probs=32.0
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 015024 374 TRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 408 (414)
Q Consensus 374 ~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~~~~~ 408 (414)
...+|+.|||+||+||+..++.|.+||+++++++.
T Consensus 176 ~~~~E~~nGRlAM~~~~g~~~~~~~tg~g~~~~l~ 210 (232)
T 2bhw_A 176 LKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLA 210 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCSHHHHH
T ss_pred HHHhhhhccchHHHHHHHHHHHHHhcCCChHHHHH
Confidence 34689999999999999999999999999999874
No 18
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=97.73 E-value=0.00026 Score=70.96 Aligned_cols=86 Identities=21% Similarity=0.289 Sum_probs=62.7
Q ss_pred EEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEccc--ccccc-hhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCC
Q 015024 234 YTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPIS--FVSEH-IETLEEIDVEYKELALKSGIEKWGRVPALGCE 310 (414)
Q Consensus 234 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~g--FvsD~-lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~ 310 (414)
+.+++ |.+ .|+++|+|++|.++|+++|+|+|.. |.+-. --...++....++.. ..+.-++..++.+.+|
T Consensus 100 V~~am--ry~-----~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~-~~~~i~i~~i~~~~~~ 171 (362)
T 1lbq_A 100 PYVAF--RYA-----KPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALD-SERSISWSVIDRWPTN 171 (362)
T ss_dssp EEEEE--SSS-----SSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHC-TTCCSEEEEECCCTTC
T ss_pred EEeec--ccC-----CCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcc-cCCCceEEEecCCCCC
Confidence 45564 553 7999999999999999999999855 43211 122556655555542 2333357899999999
Q ss_pred HHHHHHHHHHHHHhCCC
Q 015024 311 ATFISDLADAVIESLPY 327 (414)
Q Consensus 311 p~fi~~La~lV~~~l~~ 327 (414)
|.||+++++.|.+++..
T Consensus 172 p~~I~ala~~I~~~l~~ 188 (362)
T 1lbq_A 172 EGLIKAFSENITKKLQE 188 (362)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987654
No 19
>3pl9_A Chlorophyll A-B binding protein; CP29, light-harvesting COMP membrane protein, plant, photosynthesis, chloroplast, thyla photosystem II; HET: CLA CHL LUT XAT NEX G3P HTG; 2.80A {Spinacia oleracea}
Probab=97.63 E-value=2.8e-05 Score=73.48 Aligned_cols=35 Identities=34% Similarity=0.454 Sum_probs=32.3
Q ss_pred cchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 015024 374 TRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 408 (414)
Q Consensus 374 ~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~~~~~ 408 (414)
...+|+.|||+||+||+..++.|++||+|.++++.
T Consensus 193 ~r~~ElknGRlAMla~~g~~~q~~vtG~Gpl~~l~ 227 (243)
T 3pl9_A 193 LQLAEIKHARLAMVGFLGFAVQAAVTGKGPLNNWV 227 (243)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 45699999999999999999999999999999874
No 20
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=97.47 E-value=0.00047 Score=69.02 Aligned_cols=110 Identities=17% Similarity=0.177 Sum_probs=77.9
Q ss_pred CCCCCchHHHHHHHHHHHHHhhccCCCceEEEee--ecC-----CCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHH
Q 015024 65 GGGSPLRRITDAQAEELRKSLWEKNLPAKVYVGM--RYW-----HPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSS 137 (414)
Q Consensus 65 gggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~am--ry~-----~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~ 137 (414)
..|.|-..+.++-+++|.++|+-. . .+..++ |.| .|++.++|++|.++|+++|+|+|.- +++-+.
T Consensus 207 ~~GDpY~~q~~~t~~lv~e~Lg~~-~--~~~l~~QSr~G~~~WL~P~t~d~l~~L~~~G~k~vvv~P~g-----FvsD~l 278 (359)
T 3hcn_A 207 NRGDPYPQEVSATVQKVMERLEYC-N--PYRLVWQSKVGPMPWLGPQTDESIKGLCERGRKNILLVPIA-----FTSDHI 278 (359)
T ss_dssp TTTCSHHHHHHHHHHHHHHHTTTC-S--CEEEEEECCSCSSCBSSSBHHHHHHHHHHTTCCEEEEECTT-----CCSCCC
T ss_pred ccCCCHHHHHHHHHHHHHHHcCCC-C--CEEEEEEcCCCCCCCCCCCHHHHHHHHHHcCCCeEEEECCc-----cchhhH
Confidence 346788888888888888888532 1 244555 455 6999999999999999999999973 333333
Q ss_pred --HHHHHHHH-HhccccCCc-ceEEeCCCCCChHHHHHHHHHHHHHHHh
Q 015024 138 --LRLLESIF-REDEYLVNM-QHTVIPSWYQREGYITAMANLIEKELQN 182 (414)
Q Consensus 138 --~~~~~e~~-~~~~~~~~~-~~~~i~~~~~~p~yI~a~a~~I~~~l~~ 182 (414)
+.++.... ++.-...++ .++.++...+||.||+++++.|++.++.
T Consensus 279 ETL~Eid~E~~~e~a~e~G~~~~~rip~LNd~p~fi~~La~lv~~~l~~ 327 (359)
T 3hcn_A 279 ETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLVHSHIQS 327 (359)
T ss_dssp CCHHHHCHHHHHHHHHHTCCCEEEECCCSTTCHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHhCCCceEEEcCCCCCCHHHHHHHHHHHHHHHhc
Confidence 33332111 111011234 5889999999999999999999999876
No 21
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2* 3lw5_2*
Probab=97.47 E-value=1.5e-05 Score=76.71 Aligned_cols=38 Identities=34% Similarity=0.316 Sum_probs=34.1
Q ss_pred cCCcchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 015024 371 WGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 408 (414)
Q Consensus 371 ~g~~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~~~~~ 408 (414)
+.....+|+.|||+||+||+..++.|.+||+|+++++.
T Consensus 214 ~~~~~~~Ei~nGRlAMla~~g~~~~~~~tg~g~l~~l~ 251 (269)
T 2wsc_2 214 LKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLF 251 (269)
T ss_dssp CTTSTTTTHHHHHHHHTTTSSSCHHHHHTTTCSSCCCS
T ss_pred HHHHHHhhcccchHHHHHHHHHHHHHHhcCCChHHHHH
Confidence 44456799999999999999999999999999998876
No 22
>2wsc_3 LHCA3, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Glycine max} PDB: 2wse_3* 2wsf_3* 3lw5_3* 2o01_3*
Probab=97.34 E-value=2.7e-05 Score=75.15 Aligned_cols=36 Identities=36% Similarity=0.344 Sum_probs=30.6
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 015024 373 WTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 408 (414)
Q Consensus 373 ~~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~~~~~ 408 (414)
....+|+.|||+||+||+..++.|++||+++++++.
T Consensus 223 ~~r~~Ei~nGRlAMla~~g~~~~~~~tg~g~~~~l~ 258 (276)
T 2wsc_3 223 DLKLKEVKNGRLAMLAILGYFVQALVTGVGPYQNLL 258 (276)
T ss_dssp --CCSHHHHHHHHHHHHHHHHSSCCCCSSCCSCC--
T ss_pred HHHHhhhcccchHHHHHHHHHHHHHhcCCChHHHHH
Confidence 345799999999999999999999999999998864
No 23
>2wsc_1 AT3G54890, LHCA1; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_1* 2wsf_1* 2o01_1* 3lw5_1*
Probab=97.05 E-value=8.7e-05 Score=70.29 Aligned_cols=36 Identities=31% Similarity=0.367 Sum_probs=31.8
Q ss_pred cchhhhhhhHHHHHHHHHHHHHH-HHhCcchhhhhcc
Q 015024 374 TRSAETWNGRAAMLAVLVLLVLE-VTTGEGFLHQWGI 409 (414)
Q Consensus 374 ~~~~E~~ngR~Am~g~~~~~~~e-~~~g~~~~~~~~~ 409 (414)
-..+|+.|||+||+||+..++.| .+||+|++++++-
T Consensus 187 ~r~~E~~nGRlAM~a~~g~~~~~~~~tG~gpl~~l~~ 223 (241)
T 2wsc_1 187 LKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLAT 223 (241)
T ss_dssp SCTTHHHHHHHHHHHHHSGGGGGSSSCCSCCCCCSSC
T ss_pred HHHhhcccccHHHHHHHHHHHhhhhcCCCchHHHHHH
Confidence 44699999999999999999999 5899999998763
No 24
>2wsc_4 Chlorophyll A-B binding protein P4, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_4* 2wsf_4* 3lw5_4* 2o01_4*
Probab=96.83 E-value=0.00011 Score=69.96 Aligned_cols=36 Identities=42% Similarity=0.519 Sum_probs=32.7
Q ss_pred ccCCcchhhhhhhHHHHHHHHHHHHHHHHhCcchhh
Q 015024 370 EWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFLH 405 (414)
Q Consensus 370 ~~g~~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~~ 405 (414)
.+.+...+|++|||+||+||+..++.|++++.|++.
T Consensus 87 ~~~~~r~aEl~hGR~AMla~~G~~~~e~~~~~g~~~ 122 (251)
T 2wsc_4 87 NLRWFVQAELVNGRWAMLGVAGMLLPEVFTSIGIIN 122 (251)
T ss_dssp CTTTTHHHHHHHTHHHHHHHTTSSTTSSSCCSCSSC
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHhcCCCccC
Confidence 567888999999999999999999999999988763
No 25
>3pl9_A Chlorophyll A-B binding protein; CP29, light-harvesting COMP membrane protein, plant, photosynthesis, chloroplast, thyla photosystem II; HET: CLA CHL LUT XAT NEX G3P HTG; 2.80A {Spinacia oleracea}
Probab=96.49 E-value=0.001 Score=62.81 Aligned_cols=38 Identities=39% Similarity=0.376 Sum_probs=27.8
Q ss_pred CCCcccccCCcchhhhhhhHHHHHHHHHHHHHHHHhCc
Q 015024 364 PPVTVWEWGWTRSAETWNGRAAMLAVLVLLVLEVTTGE 401 (414)
Q Consensus 364 ~~~~~~~~g~~~~~E~~ngR~Am~g~~~~~~~e~~~g~ 401 (414)
|-.+...+.+...+|+.|||+||+|++..++.|+.+|-
T Consensus 82 ~~~~~~~l~r~ReaELkHGRwAMLAvlG~lvpE~l~g~ 119 (243)
T 3pl9_A 82 PYSEVFGLQRFRECELIHGRWAMLATLGALTVEGLTGI 119 (243)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred cccchhhhHHHHHhhhhcchhHHHHHHHHHhHHhhcCc
Confidence 33333445556689999999999999999999998763
No 26
>2wsc_3 LHCA3, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Glycine max} PDB: 2wse_3* 2wsf_3* 3lw5_3* 2o01_3*
Probab=96.07 E-value=0.00013 Score=70.30 Aligned_cols=33 Identities=30% Similarity=0.483 Sum_probs=30.6
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHhCcchh
Q 015024 372 GWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFL 404 (414)
Q Consensus 372 g~~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~ 404 (414)
++...+|++|||+||+|++..++.|++++.|++
T Consensus 97 ~~~r~aEl~hGR~AMLa~~G~l~~E~~~~~g~~ 129 (276)
T 2wsc_3 97 KWLAYGEIINGRYAMLGAVGAIAPEILGKAGLI 129 (276)
T ss_dssp THHHHHHHHHHTTSCCTTTSTTSCSSCSSCCCC
T ss_pred HHHHHHHhhcccchhhhHHHHHHHHHhcccccc
Confidence 778899999999999999999999999988765
No 27
>2wsc_4 Chlorophyll A-B binding protein P4, chloroplastic; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_4* 2wsf_4* 3lw5_4* 2o01_4*
Probab=95.82 E-value=0.0015 Score=62.17 Aligned_cols=33 Identities=33% Similarity=0.434 Sum_probs=30.3
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHhCcchhhhhc
Q 015024 375 RSAETWNGRAAMLAVLVLLVLEVTTGEGFLHQWG 408 (414)
Q Consensus 375 ~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~~~~~ 408 (414)
...|+-|||+ |+||+..++-|.+||++.+.++.
T Consensus 201 k~kELkNGRL-MlAilGf~vQe~vTG~gPl~nL~ 233 (251)
T 2wsc_4 201 KEKEIANGRL-MLAFLGFIIQHNVTGKGPFDNLL 233 (251)
T ss_dssp TTHHHHHHHT-TTTHHHHHHHHTTSCCCCCCCTT
T ss_pred HHHHHhcchh-HHHHHHHHHHHHhcCccHHHHHH
Confidence 4689999999 99999999999999999988764
No 28
>2wsc_2 LHCA2, type II chlorophyll A/B binding protein from photosystem I; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Pisum sativum} PDB: 2wse_2* 2wsf_2* 2o01_2* 3lw5_2*
Probab=95.56 E-value=0.004 Score=59.76 Aligned_cols=35 Identities=31% Similarity=0.394 Sum_probs=30.6
Q ss_pred ccCCcchhhhhhhHHHHHHHHHHHHHHHHhCcchh
Q 015024 370 EWGWTRSAETWNGRAAMLAVLVLLVLEVTTGEGFL 404 (414)
Q Consensus 370 ~~g~~~~~E~~ngR~Am~g~~~~~~~e~~~g~~~~ 404 (414)
.+.+...+|+.|||+||+|++..++.|++++.|+.
T Consensus 98 ~~~~~r~aElkHGR~AMLA~~G~l~~E~l~~~G~~ 132 (269)
T 2wsc_2 98 SLRWNVQAELVHSRWAMLGAAGIFIPEFLTKLGIL 132 (269)
T ss_dssp CCTTTHHHHHHTHHHHTTTTHHHHHHHHHCCTTSS
T ss_pred HHHHHHHHHHhcchHHHHHHHHhHhHHhhccCCcc
Confidence 35567789999999999999999999999987664
No 29
>2bhw_A Chlorophyll A-B binding protein AB80; LHC-II, photosynthesis, light-harvesting, membrane protein, chloroplast, chromophore, membrane; HET: LUX NEX XAT CLA CHL LHG DGD; 2.50A {Pisum sativum} PDB: 1vcr_A* 1rwt_A*
Probab=94.46 E-value=0.021 Score=53.62 Aligned_cols=28 Identities=29% Similarity=0.232 Sum_probs=24.7
Q ss_pred CcchhhhhhhHHHHHHHHHHHHHHHHhC
Q 015024 373 WTRSAETWNGRAAMLAVLVLLVLEVTTG 400 (414)
Q Consensus 373 ~~~~~E~~ngR~Am~g~~~~~~~e~~~g 400 (414)
+...+|+.|||+||+|++..++.|+++.
T Consensus 60 r~ReaELkHGR~AMLA~~G~lv~E~l~~ 87 (232)
T 2bhw_A 60 KNRELEVIHSRWAMLGALGSVFPELLSR 87 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhccchHHHhhhhhhhHHHhcc
Confidence 3457999999999999999999999764
No 30
>2wsc_1 AT3G54890, LHCA1; photosynthesis, electron transfer, membrane proteins, large complexes; HET: CL1 PQN BCR LMU LMG SUC UNL; 3.30A {Arabidopsis thaliana} PDB: 2wse_1* 2wsf_1* 2o01_1* 3lw5_1*
Probab=80.19 E-value=0.081 Score=49.93 Aligned_cols=28 Identities=36% Similarity=0.247 Sum_probs=23.6
Q ss_pred CCcchhhhhhhHHHHHHHHHHHHHHHHh
Q 015024 372 GWTRSAETWNGRAAMLAVLVLLVLEVTT 399 (414)
Q Consensus 372 g~~~~~E~~ngR~Am~g~~~~~~~e~~~ 399 (414)
.+...+|+.|||+||+|++..++.|+++
T Consensus 81 ~~~r~~El~hgR~AMla~~G~~~~e~~~ 108 (241)
T 2wsc_1 81 ERYKESELIHCRWAMLAVPGILVPEALG 108 (241)
T ss_dssp HHSHHHHHHHHHHHTTTSTTSSSTTCCC
T ss_pred HHHHHHHHhhchhHHhhhhcccchhhcc
Confidence 3455799999999999999999888753
No 31
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=54.06 E-value=34 Score=32.37 Aligned_cols=133 Identities=17% Similarity=0.189 Sum_probs=76.8
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEe
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 239 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQ 239 (414)
+++|-+|.....+++.|.+.|.+.++ +.. ..|- .+.+-|..++.+.-+.+++.+.--. +.--++|-
T Consensus 132 PH~Wldp~~~~~~a~~I~~~L~~~dP-~~a----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~~--~~~~v~~H 197 (291)
T 1pq4_A 132 PHIWLSPTLVKRQATTIAKELAELDP-DNR----------DQYE-ANLAAFLAELERLNQELGQILQPLP--QRKFIVFH 197 (291)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHCG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHHHTTCS--CCEEEESS
T ss_pred CCccCCHHHHHHHHHHHHHHHHHHCc-ccH----------HHHH-HHHHHHHHHHHHHHHHHHHHHhCCC--CCEEEEEC
Confidence 56899999999999999999987642 210 0122 4556688888887777777764211 11112111
Q ss_pred c---------------CcCCCCCCCCcHHH---HHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeE
Q 015024 240 S---------------RVGPVEWLKPYTDE---TIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 301 (414)
Q Consensus 240 S---------------r~G~~~WL~P~t~d---~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~ 301 (414)
. -.|.. .+|+..+ .++.+.+.|+ +++++-+.|-..-.++| +++.|.+ .
T Consensus 198 ~af~Yf~~~yGl~~~~~~~~~--~eps~~~l~~l~~~ik~~~v-~~If~e~~~~~~~~~~i----------a~~~g~~-v 263 (291)
T 1pq4_A 198 PSWAYFARDYNLVQIPIEVEG--QEPSAQELKQLIDTAKENNL-TMVFGETQFSTKSSEAI----------AAEIGAG-V 263 (291)
T ss_dssp CCCHHHHHHTTCEEEESCBTT--BCCCHHHHHHHHHHHHTTTC-CEEEEETTSCCHHHHHH----------HHHHTCE-E
T ss_pred CchHHHHHHCCCEEeecccCC--CCCCHHHHHHHHHHHHHcCC-CEEEEeCCCChHHHHHH----------HHHcCCe-E
Confidence 1 11221 4565553 2222344565 45566778877777665 5577876 4
Q ss_pred EEcCCCCCCHHHHHHHHHHHH
Q 015024 302 GRVPALGCEATFISDLADAVI 322 (414)
Q Consensus 302 ~~vp~lNd~p~fi~~La~lV~ 322 (414)
.++..+.. .++++|...+.
T Consensus 264 ~~ld~l~~--~Y~~~m~~n~~ 282 (291)
T 1pq4_A 264 ELLDPLAA--DWSSNLKAVAQ 282 (291)
T ss_dssp EEECTTCS--SHHHHHHHHHH
T ss_pred EEEcCchh--hHHHHHHHHHH
Confidence 45555554 56666655443
No 32
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=53.07 E-value=42 Score=31.68 Aligned_cols=91 Identities=19% Similarity=0.099 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHH-hccccCCCCEEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHH
Q 015024 213 EMEECVDLIMEE-LEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKE 291 (414)
Q Consensus 213 ~~~~t~~~l~e~-l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e 291 (414)
+|.+..+.++++ ...+ =+-++|-+-+ ..--++..++++++.|+.-+++....+ | | ..++++
T Consensus 83 ~~~~~v~~~r~~~~~~P----ivlm~Y~n~v-----~~~g~~~f~~~~~~aGvdGvIipDlp~-----e---e-~~~~~~ 144 (271)
T 3nav_A 83 ICFELIAQIRARNPETP----IGLLMYANLV-----YARGIDDFYQRCQKAGVDSVLIADVPT-----N---E-SQPFVA 144 (271)
T ss_dssp HHHHHHHHHHHHCTTSC----EEEEECHHHH-----HHTCHHHHHHHHHHHTCCEEEETTSCG-----G---G-CHHHHH
T ss_pred HHHHHHHHHHhcCCCCC----EEEEecCcHH-----HHHhHHHHHHHHHHCCCCEEEECCCCH-----H---H-HHHHHH
Confidence 566667777765 3221 0345665411 112357788999999998888854333 3 2 345888
Q ss_pred HHHhcCCeeEEEcCCCCCCHHHHHHHHHHHH
Q 015024 292 LALKSGIEKWGRVPALGCEATFISDLADAVI 322 (414)
Q Consensus 292 ~a~~~G~~~~~~vp~lNd~p~fi~~La~lV~ 322 (414)
.++++|.. ...+-+++++++.++.+++...
T Consensus 145 ~~~~~gl~-~I~lvap~t~~eri~~i~~~~~ 174 (271)
T 3nav_A 145 AAEKFGIQ-PIFIAPPTASDETLRAVAQLGK 174 (271)
T ss_dssp HHHHTTCE-EEEEECTTCCHHHHHHHHHHCC
T ss_pred HHHHcCCe-EEEEECCCCCHHHHHHHHHHCC
Confidence 88999996 5566688899888877777643
No 33
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=51.55 E-value=1.5e+02 Score=27.43 Aligned_cols=88 Identities=16% Similarity=0.249 Sum_probs=59.3
Q ss_pred CceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCccc------------ccchHHHHHHHHHHHHhccccCCcceEE
Q 015024 91 PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFS------------ISTSGSSLRLLESIFREDEYLVNMQHTV 158 (414)
Q Consensus 91 ~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS------------~~Ttgs~~~~~~e~~~~~~~~~~~~~~~ 158 (414)
+++|.+|+-=..|...+..+..++.|.+=++-+||=|..- ..+.....+.+..++........+.-+.
T Consensus 27 p~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~~~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 106 (245)
T 2nly_A 27 EIPVTVAVMPFLEHSTKQAEIAQAAGLEVIVHMPLEPKKGKISWLGPSGITSNLSVGEVKSRVRKAFDDIPYAVGLNNHM 106 (245)
T ss_dssp SSCEEEEECSSSTTHHHHHHHHHHTTCEEEEEEEECCC--------CCCBCTTCCHHHHHHHHHHHHHHSTTCCEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEEcCCCCCCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 5789999986679999999999999999999999977521 1222222333444444333333455566
Q ss_pred eCCCCCChHHHHHHHHHHHH
Q 015024 159 IPSWYQREGYITAMANLIEK 178 (414)
Q Consensus 159 i~~~~~~p~yI~a~a~~I~~ 178 (414)
...|-.++.-.+.+.+.+++
T Consensus 107 GS~~T~~~~~m~~vm~~l~~ 126 (245)
T 2nly_A 107 GSKIVENEKIMRAILEVVKE 126 (245)
T ss_dssp CTTGGGCHHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHH
Confidence 77788888777776666554
No 34
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=46.74 E-value=92 Score=28.25 Aligned_cols=73 Identities=11% Similarity=0.036 Sum_probs=47.0
Q ss_pred CCCc-----hHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHH
Q 015024 67 GSPL-----RRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLL 141 (414)
Q Consensus 67 gSPL-----~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~ 141 (414)
+||- ...|+++++.+.+.+.+.|.+ |+.---+....+.+..+++.+ +|.||+. +|-|-.+..+..+..+
T Consensus 33 gsp~~~~s~~s~n~~L~~~~~~~l~~~g~e--v~~~dL~~~~Dv~~~~~~l~~--aD~iv~~--~P~y~~~~p~~lK~~i 106 (218)
T 3rpe_A 33 AMKEFAHSKGALNLTLTNVAADFLRESGHQ--VKITTVDQGYDIESEIENYLW--ADTIIYQ--MPAWWMGEPWILKKYI 106 (218)
T ss_dssp CCCCBTTBCSHHHHHHHHHHHHHHHHTTCC--EEEEEGGGCCCHHHHHHHHHH--CSEEEEE--EECBTTBCCHHHHHHH
T ss_pred eCCCcccCCChHHHHHHHHHHHHHhhCCCE--EEEEECCCccCHHHHHHHHHh--CCEEEEE--CChHhccCCHHHHHHH
Confidence 4774 478889999999888776644 444444556677777777776 5666554 3444555555555555
Q ss_pred HHHH
Q 015024 142 ESIF 145 (414)
Q Consensus 142 ~e~~ 145 (414)
++.+
T Consensus 107 D~v~ 110 (218)
T 3rpe_A 107 DEVF 110 (218)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5554
No 35
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=46.05 E-value=99 Score=27.62 Aligned_cols=34 Identities=24% Similarity=0.206 Sum_probs=19.0
Q ss_pred EEEEEecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEc
Q 015024 234 YTLAYQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVP 271 (414)
Q Consensus 234 ~~lafQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP 271 (414)
+++++|+-. |-..+.++.++.+++.|++.|-+.+
T Consensus 10 mklg~~~~~----~~~~~~~~~l~~~~~~G~~~vEl~~ 43 (262)
T 3p6l_A 10 WRLGMQSYS----FHLFPLTEALDKTQELGLKYIEIYP 43 (262)
T ss_dssp EEEEEEGGG----GTTSCHHHHHHHHHHTTCCEEEECT
T ss_pred cEEEEEecc----cCCCCHHHHHHHHHHcCCCEEeecC
Confidence 556666532 2223566666666666666666654
No 36
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=43.60 E-value=39 Score=33.56 Aligned_cols=65 Identities=15% Similarity=0.258 Sum_probs=43.3
Q ss_pred CCCCCCcHHHHHHHHhhc-CCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCH
Q 015024 245 VEWLKPYTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEA 311 (414)
Q Consensus 245 ~~WL~P~t~d~L~~L~~~-G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p 311 (414)
-.|.+|.....|+++++. |++.|.+.+.-+.....-+..++. +.++..+++|.+ +..+.|++-++
T Consensus 25 ~rW~g~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~-~lk~~l~~~GL~-i~~i~s~~~~~ 90 (386)
T 3bdk_A 25 FRWYGKKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENIL-ELKKMVEEAGLE-ITVIESIPVHE 90 (386)
T ss_dssp CBCCCTTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHH-HHHHHHHTTTCE-EEEEECCCCCH
T ss_pred EEecCCCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHH-HHHHHHHHcCCE-EEEEecccccc
Confidence 467888777799999999 999998865222211111233432 467777889985 76776766654
No 37
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=43.12 E-value=44 Score=30.67 Aligned_cols=32 Identities=19% Similarity=0.150 Sum_probs=26.2
Q ss_pred EEeccccC--CcchHHHHHHhhcCCCCcccCCcc
Q 015024 6 LFYFVYIS--ASSSLHLRFSQLQVPTDIIRLPRL 37 (414)
Q Consensus 6 ~~~~~~~~--~~~~v~~fL~~flsD~rVi~lp~~ 37 (414)
.+|.+++. |..|+...|.+-+.-|.++.+|.+
T Consensus 214 ~yn~~~~~~~t~~e~~~~ia~~lgrp~~~pvP~~ 247 (298)
T 4b4o_A 214 VLNGVAPSSATNAEFAQTFGAALGRRAFIPLPSA 247 (298)
T ss_dssp EEEESCSCCCBHHHHHHHHHHHHTCCCCCCBCHH
T ss_pred eEEEECCCccCHHHHHHHHHHHhCcCCcccCCHH
Confidence 57888877 888888889999988888888864
No 38
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=41.76 E-value=19 Score=29.83 Aligned_cols=39 Identities=15% Similarity=0.025 Sum_probs=30.2
Q ss_pred CcHHHHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCe
Q 015024 250 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIE 299 (414)
Q Consensus 250 P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~ 299 (414)
..+.+.++++.+.|+|. +++..||.. .|..+.|+++|+.
T Consensus 69 ~~v~~~v~e~~~~g~k~-v~~~~G~~~----------~e~~~~a~~~Gir 107 (122)
T 3ff4_A 69 QNQLSEYNYILSLKPKR-VIFNPGTEN----------EELEEILSENGIE 107 (122)
T ss_dssp HHHGGGHHHHHHHCCSE-EEECTTCCC----------HHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhcCCCE-EEECCCCCh----------HHHHHHHHHcCCe
Confidence 34567888999999986 678889842 4688888899984
No 39
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=41.38 E-value=2.3e+02 Score=26.51 Aligned_cols=88 Identities=14% Similarity=0.149 Sum_probs=60.0
Q ss_pred CceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCccc------------ccchHHHHHHHHHHHHhccccCCcceEE
Q 015024 91 PAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFS------------ISTSGSSLRLLESIFREDEYLVNMQHTV 158 (414)
Q Consensus 91 ~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS------------~~Ttgs~~~~~~e~~~~~~~~~~~~~~~ 158 (414)
+++|.+|+-=..|...+..+..++.|.+=++-+||=|..- ..+.....+.+..++........+.-+.
T Consensus 54 P~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~GvnNHm 133 (261)
T 2qv5_A 54 PPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPFGYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGVMNYL 133 (261)
T ss_dssp CTTSEEEEETTCSSHHHHHHHHHHHTCCEEEEEEECCTTTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEEEEEE
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEEeccc
Confidence 5779999987789999999999999999999999987631 1222222333444443333233345566
Q ss_pred eCCCCCChHHHHHHHHHHHH
Q 015024 159 IPSWYQREGYITAMANLIEK 178 (414)
Q Consensus 159 i~~~~~~p~yI~a~a~~I~~ 178 (414)
...|-.++.-.+.+.+.+++
T Consensus 134 GS~~T~~~~~M~~vm~~L~~ 153 (261)
T 2qv5_A 134 GGRFLAEQSALEPVMRDIGK 153 (261)
T ss_dssp CTTGGGCHHHHHHHHHHHHH
T ss_pred ccchhcCHHHHHHHHHHHHH
Confidence 77788888887777766654
No 40
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=36.73 E-value=1.1e+02 Score=28.56 Aligned_cols=136 Identities=15% Similarity=0.180 Sum_probs=75.0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEe
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 239 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQ 239 (414)
+++|-+|.....+++.|.+.|.+.++ +.. ..|- .+.+-|..++.+.-+.+.+.+.-- ++.--++|-
T Consensus 121 PHvWldp~~~~~~a~~I~~~L~~~dP-~~a----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~--~~~~~v~~H 186 (286)
T 3gi1_A 121 PHTWTDPVLAGEEAVNIAKELGRLDP-KHK----------DSYT-KNAKAFKKEAEQLTEEYTQKFKKV--RSKTFVTQH 186 (286)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHHHTTC--SCCEEEEEE
T ss_pred CceecCHHHHHHHHHHHHHHHHHHCh-hhH----------HHHH-HHHHHHHHHHHHHHHHHHHHHhcC--CCCEEEEEC
Confidence 57899999999999999999987642 210 0112 445668888888877777776421 111223332
Q ss_pred cCc-------C--------CCCCCCCcHH---HHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeE
Q 015024 240 SRV-------G--------PVEWLKPYTD---ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 301 (414)
Q Consensus 240 Sr~-------G--------~~~WL~P~t~---d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~ 301 (414)
..| | ..+=.+|+.. +.++.+.+.++ +++++-+.|-....|+ ++++.|.+ .
T Consensus 187 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v-~~if~e~~~~~~~~~~----------la~~~g~~-v 254 (286)
T 3gi1_A 187 TAFSYLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNV-KTIFAEDNVNPKIAHA----------IAKSTGAK-V 254 (286)
T ss_dssp SCCHHHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTC-CEEEECTTSCTHHHHH----------HHHTTTCE-E
T ss_pred CchHHHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCC-CEEEEeCCCChHHHHH----------HHHHhCCe-E
Confidence 222 2 0001245433 23333445565 4556666776655554 35678886 4
Q ss_pred EEcCCCCC----CHHHHHHHHHHH
Q 015024 302 GRVPALGC----EATFISDLADAV 321 (414)
Q Consensus 302 ~~vp~lNd----~p~fi~~La~lV 321 (414)
..+-.+.. .+.++++|...+
T Consensus 255 ~~l~pl~~~~~~~~~Y~~~m~~n~ 278 (286)
T 3gi1_A 255 KTLSPLEAAPSGNKTYLENLRANL 278 (286)
T ss_dssp EECCCSCSCCSSSCCHHHHHHHHH
T ss_pred EEecccccCCCCcCCHHHHHHHHH
Confidence 44432322 236777666544
No 41
>3lm3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.44A {Parabacteroides distasonis}
Probab=36.50 E-value=87 Score=30.56 Aligned_cols=105 Identities=10% Similarity=0.011 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHhhccCCCceEEEeeec-----CCCCHHHHHHHH---HHcCCCEEEEEecCCcccccchHHHHHHHHH
Q 015024 72 RITDAQAEELRKSLWEKNLPAKVYVGMRY-----WHPFTEEAIEQI---KRDGITKLVVLPLYPQFSISTSGSSLRLLES 143 (414)
Q Consensus 72 ~~T~~qa~~L~~~L~~~~~~~~V~~amry-----~~P~i~e~l~~l---~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e 143 (414)
-+|-+.++++.+.+.+.+++.++.+||.+ ..|...++.+-+ .++=-|+|-.+|=||---..+---+.+++.+
T Consensus 50 wHtl~gVr~~reAfa~~~Pn~rlTWa~t~~aled~rp~yrqIr~Yv~~c~~kyGDEV~~~pGYf~~mylPr~eV~ReMSE 129 (449)
T 3lm3_A 50 WHTLEGVRALREAFATNNPNGRLTWGFTMNALEDGRKNYREIRDYVVECQKKYGDEVTYFPGYFPAMYLPRERVNREMSE 129 (449)
T ss_dssp GCCHHHHHHHHHHHHTTCTTCCCEEEECHHHHHCCSHHHHHHHHHHHHHHHHHCCEEEECCCSCHHHHSCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCceEEEEEEEeecccCChhHHHHHHHHHHHHHHhCCceeecCCCchhhcCcHHHHHHHHHH
Confidence 35667778888888888899999999974 477777666544 4444499999999985445555566666666
Q ss_pred HHHhcccc-C-CcceEEeCCCCCChHHHHHHHHHH
Q 015024 144 IFREDEYL-V-NMQHTVIPSWYQREGYITAMANLI 176 (414)
Q Consensus 144 ~~~~~~~~-~-~~~~~~i~~~~~~p~yI~a~a~~I 176 (414)
+++..... . +..-.-+-+++-++.=++.+++.-
T Consensus 130 Ai~~lh~m~~~~YrPksl~~gflsa~nl~~Lae~~ 164 (449)
T 3lm3_A 130 AIEIISKMVGNGYRPQSIMGGFLSADNLRYLAEKE 164 (449)
T ss_dssp HHHHHHHHHCTTCCCSEEECSSCCHHHHHHHHHHS
T ss_pred HHHHHHHhccCCcCchhhhhcccCHHHHhhHHhhc
Confidence 55432110 0 111135678888888888887754
No 42
>3cx3_A Lipoprotein; zinc-binding, transport, lipid binding protein, metal binding protein; 2.40A {Streptococcus pneumoniae}
Probab=36.50 E-value=1.8e+02 Score=27.09 Aligned_cols=135 Identities=19% Similarity=0.262 Sum_probs=76.3
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCE-----
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAY----- 234 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~----- 234 (414)
+++|-+|.....+++.|.+.|.+.++ ++. ..|- .+.+-|..++.+.-+.+.+.+.--..+ .+
T Consensus 119 PH~Wldp~~~~~~a~~I~~~L~~~dP-~~a----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~~~~-~~v~~H~ 185 (284)
T 3cx3_A 119 PHTWLDPEKAGEEAQIIADKLSEVDS-EHK----------ETYQ-KNAQAFIKKAQELTKKFQPKFEKATQK-TFVTQHT 185 (284)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHSG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHHHHSCSCC-CEEEEES
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhCc-ccH----------HHHH-HHHHHHHHHHHHHHHHHHHHHhcCCCC-EEEEECC
Confidence 57889999999999999999987642 210 0112 445668888877777777665321101 11
Q ss_pred ------------EEEEecCcCCCCCCCCcHH---HHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCe
Q 015024 235 ------------TLAYQSRVGPVEWLKPYTD---ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIE 299 (414)
Q Consensus 235 ------------~lafQSr~G~~~WL~P~t~---d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~ 299 (414)
.++.++ ..++ .+|+.. +.++.+.+.|++ ++++-+.|-....+++ +++.|.+
T Consensus 186 af~Yf~~~yGl~~~~~~~-~~~~--~eps~~~l~~l~~~ik~~~v~-~if~e~~~~~~~~~~i----------a~~~g~~ 251 (284)
T 3cx3_A 186 AFSYLAKRFGLNQLGIAG-ISPE--QEPSPRQLTEIQEFVKTYKVK-TIFTESNASSKVAETL----------VKSTGVG 251 (284)
T ss_dssp CCHHHHHHTTCCEEEEEC-SSTT--CCCCSHHHHHHHHHHHHTTCC-CEEECSSSCCHHHHHH----------HSSSSCC
T ss_pred chHHHHHHcCCEEeeccC-CCCC--CCCCHHHHHHHHHHHHHcCCC-EEEEeCCCCcHHHHHH----------HHHcCCe
Confidence 122221 1111 234333 333334555765 5566667766555554 6688886
Q ss_pred eEEEcCCCCC----CHHHHHHHHHHHH
Q 015024 300 KWGRVPALGC----EATFISDLADAVI 322 (414)
Q Consensus 300 ~~~~vp~lNd----~p~fi~~La~lV~ 322 (414)
...+..+.. ...++++|...+.
T Consensus 252 -v~~l~~l~~~~~~~~~Y~~~m~~n~~ 277 (284)
T 3cx3_A 252 -LKTLNPLESDPQNDKTYLENLEENMS 277 (284)
T ss_dssp -EEECCCSSSCCCSSCCHHHHHHHHHH
T ss_pred -EEEecCcccCCCCcccHHHHHHHHHH
Confidence 555544443 3367777765554
No 43
>1xvl_A Mn transporter, MNTC protein; manganese, ABC-type transport systems, photosynthesis, cyanobacteria, disulfide bond, metal transport; 2.90A {Synechocystis SP} SCOP: c.92.2.2
Probab=35.32 E-value=92 Score=29.86 Aligned_cols=141 Identities=13% Similarity=0.113 Sum_probs=76.5
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEe
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 239 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQ 239 (414)
+|+|-+|.....+++.|.+.|.+.++ ++. ..|- .+.+-|..++.+.-+.+.+.+..-..++..-++|-
T Consensus 144 PHvWldp~n~~~~a~~I~~~L~~~DP-~~a----------~~Y~-~Na~~~~~~L~~Ld~~~~~~l~~~~~~~r~~v~~H 211 (321)
T 1xvl_A 144 PHAWMSPRNALVYVENIRQAFVELDP-DNA----------KYYN-ANAAVYSEQLKAIDRQLGADLEQVPANQRFLVSCE 211 (321)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHHHTTSCGGGCEEEEEE
T ss_pred CCcCCCHHHHHHHHHHHHHHHHHHCc-ccH----------HHHH-HHHHHHHHHHHHHHHHHHHHHhhCcccCCEEEEEC
Confidence 57889999999999999999987642 210 0122 45566888888877777776642100001112211
Q ss_pred cCc---------------CCCCCCCCcHHH--H-HHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeE
Q 015024 240 SRV---------------GPVEWLKPYTDE--T-IIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 301 (414)
Q Consensus 240 Sr~---------------G~~~WL~P~t~d--~-L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~ 301 (414)
..| |..+=.+|+..+ . ++.+.+.|++ ++++-+.|-....+++ +++.|.+-.
T Consensus 212 ~af~Yfa~~yGL~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~-~If~e~~~~~~~~~~i----------A~e~g~~v~ 280 (321)
T 1xvl_A 212 GAFSYLARDYGMEEIYMWPINAEQQFTPKQVQTVIEEVKTNNVP-TIFCESTVSDKGQKQV----------AQATGARFG 280 (321)
T ss_dssp STTHHHHHHTTCEEEEEESSSSSCSCCHHHHHHHHHHHHTTTCS-EEEEETTSCSHHHHHH----------HTTTCCEEE
T ss_pred chHHHHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCc-EEEEeCCCChHHHHHH----------HHhcCCcee
Confidence 111 111113455443 2 2233444654 5566667766655554 668888632
Q ss_pred --EEcCCCCCC----HHHHHHHHHHHHH
Q 015024 302 --GRVPALGCE----ATFISDLADAVIE 323 (414)
Q Consensus 302 --~~vp~lNd~----p~fi~~La~lV~~ 323 (414)
.+...+... ..++++|.+.+..
T Consensus 281 ~~l~~d~l~~~~~~~~~Y~~~m~~n~~~ 308 (321)
T 1xvl_A 281 GNLYVDSLSTEEGPVPTFLDLLEYDARV 308 (321)
T ss_dssp EEECSSCCCCSSSSCCSHHHHHHHHHHH
T ss_pred eeecCCccCCCCCCccCHHHHHHHHHHH
Confidence 223555431 3577777655543
No 44
>3lup_A DEGV family protein; PSI-2, MCSG, structural genomics, fatty acid binding, protei structure initiative; HET: ELA; 2.65A {Streptococcus agalactiae} SCOP: c.119.1.0
Probab=34.77 E-value=36 Score=32.19 Aligned_cols=111 Identities=14% Similarity=0.144 Sum_probs=61.2
Q ss_pred CCCCHH---HHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEeCCCCCChHHHHHHHHHHH
Q 015024 101 WHPFTE---EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE 177 (414)
Q Consensus 101 ~~P~i~---e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~ 177 (414)
+.|+.. ++.+++.++|+++|+++++.-. -+|++... ..+. ..+++.+++++++-...-+.--...+..+
T Consensus 65 Sqps~~~~~~~f~~l~~~g~d~ii~i~iSs~----LSGTy~sA-~~a~---~~~~~~~I~ViDS~~~s~g~g~~v~~A~~ 136 (285)
T 3lup_A 65 SQPSLAELDDLLCQLEKEGYTHVLGLFIAAG----ISGFWQNI-QFLI---EEHPNLTIAFPDTKITSAPQGNLVRNALM 136 (285)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCEEEECCSCGG----GCTHHHHH-TTHH---HHCTTSEEECCCCCCCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCeEEEEeCCCc----hhHHHHHH-HHHH---HhCCCCCEEEEcCCchHHHHHHHHHHHHH
Confidence 688876 5566777889999999999633 33333221 1111 12455678899988765543322211111
Q ss_pred ------------HHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccc
Q 015024 178 ------------KELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKR 228 (414)
Q Consensus 178 ------------~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~ 228 (414)
+.+++. .+++.+.|+...+ .+. .+|.. +-.++..+...|++.
T Consensus 137 l~~~G~s~eeI~~~l~~~--~~~~~~~f~v~~L--~~L-~kGGR----is~~~a~ig~lL~IK 190 (285)
T 3lup_A 137 CSREGMDFDVIVNKIQSQ--IEKIEGFIVVNDL--NHL-VKGGR----LSNGSAIIGNLLSIK 190 (285)
T ss_dssp HHTTTCCHHHHHHHHHHH--HTTCEEEEECSCT--HHH-HHHTC----BTTHHHHHHHHTTSC
T ss_pred HHHcCCCHHHHHHHHHHH--HhhcEEEEEECCh--HHH-hhCCC----ccHHHHHHHHhhCcE
Confidence 111111 1345677777666 444 23322 345667777888764
No 45
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=33.35 E-value=2e+02 Score=24.29 Aligned_cols=32 Identities=16% Similarity=0.115 Sum_probs=23.0
Q ss_pred CCCc--hHHHHHHHHHHHHHhhccCCCceEEEee
Q 015024 67 GSPL--RRITDAQAEELRKSLWEKNLPAKVYVGM 98 (414)
Q Consensus 67 gSPL--~~~T~~qa~~L~~~L~~~~~~~~V~~am 98 (414)
+||- ...|++.++.+.+.+.+.|.+..|..--
T Consensus 9 ~S~~~~~s~t~~la~~~~~~l~~~g~~~~v~~~d 42 (201)
T 1t5b_A 9 SSILAGYSQSGQLTDYFIEQWREKHVADEITVRD 42 (201)
T ss_dssp CCSSGGGCHHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred eCCCCCCChHHHHHHHHHHHHHHhCCCCeEEEEe
Confidence 5777 4899999999999998765344455433
No 46
>3nyi_A FAT acid-binding protein; stearic acid, DEGV family protein, structural genomics, PSI- protein structure initiative; HET: STE; 1.90A {Eubacterium ventriosum} SCOP: c.119.1.0
Probab=31.64 E-value=83 Score=29.83 Aligned_cols=63 Identities=21% Similarity=0.103 Sum_probs=40.1
Q ss_pred CCCCHH---HHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEeCCCCCChHH
Q 015024 101 WHPFTE---EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGY 168 (414)
Q Consensus 101 ~~P~i~---e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~y 168 (414)
+.|+.. ++.+++.++| ++|+++++.-.-|. |..+...+.+.+.+ .+++.+++++++-...-+.
T Consensus 66 Sqps~~~~~~~f~~l~~~g-~~ii~i~iSs~LSG--Ty~sA~~aa~~~~e--~~~~~~I~ViDS~~~s~g~ 131 (297)
T 3nyi_A 66 SLPSVESYADVFRSFVEQG-FPVVCFTITTLFSG--SYNSAINAKSLVLE--DYPDANICVIDSKQNTVTQ 131 (297)
T ss_dssp ECCCHHHHHHHHHHHHTTT-CCEEEEESCTTTCS--HHHHHHHHHHHHHH--HCTTCCEEEEECSCCHHHH
T ss_pred cCCCHHHHHHHHHHHHHCC-CeEEEEECCCcHhH--HHHHHHHHHHHHHh--hCCCCeEEEEeCCchHHHH
Confidence 688876 5566777788 99999999644332 23333334443322 2456688999998765443
No 47
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=31.54 E-value=85 Score=30.18 Aligned_cols=65 Identities=12% Similarity=0.229 Sum_probs=39.9
Q ss_pred CCCCCC-cHHHHHHHHhhc-CCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCH
Q 015024 245 VEWLKP-YTDETIIKLGQK-GVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEA 311 (414)
Q Consensus 245 ~~WL~P-~t~d~L~~L~~~-G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p 311 (414)
..|.+| +...+|+.+++. |++.|.+.....-.+..-+..++ .+.++.+.++|++ +.-+..++.++
T Consensus 15 ~~~~g~~~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~-~~~~~~l~~~GL~-i~~~~~~~~~~ 81 (367)
T 1tz9_A 15 FRWYGAAGDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEI-QALKQSVEQEGLA-LLGIESVAIHD 81 (367)
T ss_dssp CBCCCTTTCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHH-HHHHHHHHHTTCE-EEEECSCCCCH
T ss_pred eeecCCCCChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHH-HHHHHHHHHCCCe-EEEEecCCCcH
Confidence 567788 777789999999 99999874321100111112222 2467778889986 44555555553
No 48
>3hh8_A Metal ABC transporter substrate-binding lipoprote; lipoprotein, metal binding, cell membrane, copper transport, iron; 1.87A {Streptococcus pyogenes serotype M1} SCOP: c.92.2.2 PDB: 1psz_A 3ztt_A
Probab=30.98 E-value=1.8e+02 Score=27.28 Aligned_cols=139 Identities=14% Similarity=0.084 Sum_probs=75.0
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEe
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 239 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQ 239 (414)
+|+|-+|.....+++.|.+.|.+.++ ++. ..|- .+.+-|..++.+.-+.+.+.+.--......-++|-
T Consensus 123 PHvWldp~~~~~~a~~I~~~L~~~dP-~~a----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~~~~~~~~v~~H 190 (294)
T 3hh8_A 123 PHAWLNLENGIIYSKNIAKQLIAKDP-KNK----------ETYE-KNLKAYVAKLEKLDKEAKSKFDAIAENKKLIVTSE 190 (294)
T ss_dssp CCGGGSHHHHHHHHHHHHHHHHHHCG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHTTTTSCGGGCCEEEEE
T ss_pred CceeCCHHHHHHHHHHHHHHHHHhCc-cch----------HHHH-HHHHHHHHHHHHHHHHHHHHHhhCCccCcEEEEEC
Confidence 56788999999999999999977642 210 0111 34456777777777777776532110001112221
Q ss_pred cCc-------C--------CCCCCCCcHH---HHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeE
Q 015024 240 SRV-------G--------PVEWLKPYTD---ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 301 (414)
Q Consensus 240 Sr~-------G--------~~~WL~P~t~---d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~ 301 (414)
..| | ..+=.+|+.. +.++.+.+.+++-|++ -..|-....+ .++++.|.+-.
T Consensus 191 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~-e~~~~~~~~~----------~ia~~~g~~v~ 259 (294)
T 3hh8_A 191 GCFKYFSKAYGVPSAYIWEINTEEEGTPDQISSLIEKLKVIKPSALFV-ESSVDRRPME----------TVSKDSGIPIY 259 (294)
T ss_dssp SCCHHHHHHHTCCEEEEESSCCSCCCCHHHHHHHHHHHHHSCCSCEEE-ETTSCSHHHH----------HHHHHHCCCEE
T ss_pred ChHHHHHHHcCCceeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEE-eCCCCcHHHH----------HHHHHhCCcEE
Confidence 111 1 1111345433 3344445567765555 4466555444 34667888644
Q ss_pred --EEcCCCC----CCHHHHHHHHHHH
Q 015024 302 --GRVPALG----CEATFISDLADAV 321 (414)
Q Consensus 302 --~~vp~lN----d~p~fi~~La~lV 321 (414)
.+.+.++ ....++++|.+.+
T Consensus 260 ~~~~~~~l~~~~~~~~~Y~~~m~~n~ 285 (294)
T 3hh8_A 260 SEIFTDSIAKKGKPGDSYYAMMKWNL 285 (294)
T ss_dssp EEECSSSCCCTTSTTCSHHHHHHHHH
T ss_pred eeecCcccCCCCCCcccHHHHHHHHH
Confidence 4456665 2345777666544
No 49
>3lub_A Putative creatinine amidohydrolase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Bacteroides fragilis}
Probab=30.18 E-value=82 Score=29.25 Aligned_cols=35 Identities=11% Similarity=0.077 Sum_probs=19.0
Q ss_pred CCchH---HHHHHHHHHHHHhhcc-CCCceEEEeeecCC
Q 015024 68 SPLRR---ITDAQAEELRKSLWEK-NLPAKVYVGMRYWH 102 (414)
Q Consensus 68 SPL~~---~T~~qa~~L~~~L~~~-~~~~~V~~amry~~ 102 (414)
=||-. +.+..++++.+++.++ +.++.|.....|+.
T Consensus 38 LPlgtD~~ia~~ia~~~a~~l~~~~~~~~lv~P~i~yG~ 76 (254)
T 3lub_A 38 LPYLTDCILPHDIAVEAAELALSRSGVRCMVMPPVPFGA 76 (254)
T ss_dssp BBTTHHHHHHHHHHHHHHHHHHHHHCCCEEECCCBCCBC
T ss_pred ccchHHHHHHHHHHHHHHHhhhhhcCCCEEEeCCccccC
Confidence 45543 3444555555555433 34566666677776
No 50
>3jr7_A Uncharacterized EGV family protein COG1307; structural genomics, PSI2, MCSG, protein struct initiative; HET: PG6; 2.00A {Ruminococcus gnavus}
Probab=29.64 E-value=1.7e+02 Score=27.66 Aligned_cols=64 Identities=22% Similarity=0.145 Sum_probs=42.5
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEeCCCCCChHHH
Q 015024 101 WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYI 169 (414)
Q Consensus 101 ~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yI 169 (414)
+.|+..+-.+...+ |.++|+++++.-.-|. |..+.....+.+.+ .+|+.++++|++-...-+.-
T Consensus 81 Sqps~~~~~~~f~~-~~~~Ii~i~iSs~LSG--Ty~sA~~Aa~~~~e--~~~~~~I~ViDS~~~s~g~g 144 (298)
T 3jr7_A 81 SCPSPERYMESYHC-DAERIYVVTLSAELSG--SYNSAVLGKNLYEE--EYGEKQIHVFNSRSASVGET 144 (298)
T ss_dssp ECCCHHHHHHHHCS-SCSEEEEEESCTTTCS--HHHHHHHHHHHHHH--HHCCCEEEEEECSSCTHHHH
T ss_pred CCCCHHHHHHHHHh-cCCeEEEEECCcchhH--HHHHHHHHHHHHHh--hCCCCeEEEECCCchhHHHH
Confidence 69999997777754 8899999999754332 23333333343322 24666899999988776543
No 51
>3t5s_A Gilaa.00834.A, macrophage migration inhibitory factor; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Giardia lamblia}
Probab=29.55 E-value=97 Score=25.77 Aligned_cols=75 Identities=5% Similarity=0.030 Sum_probs=46.2
Q ss_pred CCCChHHHHHHHHHHHHHHHh-CCCCCceEEEEeecCChhhhhcccCCc----------------hHHHHHHHHHHHHHH
Q 015024 162 WYQREGYITAMANLIEKELQN-FDSPEQVMIFFSAHGVPLAYVEEAGDP----------------YKAEMEECVDLIMEE 224 (414)
Q Consensus 162 ~~~~p~yI~a~a~~I~~~l~~-~~~~~~~~LlfSaHgiP~~~i~~~GDp----------------Y~~~~~~t~~~l~e~ 224 (414)
-...+...+++.+.+.+++.+ .++|++ .++++.|+.+..+- ...|| ...-..+.++.+.+.
T Consensus 31 v~~~~~~~~~l~~~ls~~la~~lgKPe~-~vmV~v~~~~m~fg-Gs~dp~a~v~i~sig~~t~e~n~~~s~~i~~~l~~~ 108 (135)
T 3t5s_A 31 ADFTKDQADAFCLDMGQVLAKETGKPVS-YCMAGVRKADMSFG-TSTDLCCFVDFYCIGVISQAKNPSISAAITGCLTQH 108 (135)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHCSCGG-GCEEEEEECCCCBT-TBCCSCEEEEEECCC-----CCHHHHHHHHHHHHHH
T ss_pred CccchhccchhHHHHHHHHHHhhCCchH-HHHhhhhhhhcccC-cccceEEEEEEEEEEEEeccCCchHHHHHHHHHHHh
Confidence 344455566666666666654 244444 35555666666554 33355 455667778888899
Q ss_pred hccccCCCCEEEEEec
Q 015024 225 LEKRKITNAYTLAYQS 240 (414)
Q Consensus 225 l~~~~~~~~~~lafQS 240 (414)
||.+.. ++.+.|+.
T Consensus 109 Lgi~~~--riyI~f~d 122 (135)
T 3t5s_A 109 FKVKPE--RVYISFNE 122 (135)
T ss_dssp HCCCGG--GEEEEEEC
T ss_pred cccCcc--EEEEEecc
Confidence 988753 48888875
No 52
>3pl5_A SMU_165, putative uncharacterized protein; fatty acid binding protein, lipid binding protein; HET: PLM; 2.04A {Streptococcus mutans}
Probab=28.79 E-value=1e+02 Score=29.61 Aligned_cols=63 Identities=11% Similarity=0.064 Sum_probs=39.8
Q ss_pred CCCCHH---HHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEeCCCCCChHH
Q 015024 101 WHPFTE---EAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGY 168 (414)
Q Consensus 101 ~~P~i~---e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~y 168 (414)
+.|++. ++++++.++| ++|+++++.-.-|. |..+.....+.+.+ .+|+.++++|++-...-+.
T Consensus 97 SqPs~~~~~~~f~~l~~~g-~~Ii~I~iSS~LSG--Ty~sA~~Aa~~~~e--~~~~~~I~ViDS~~~s~g~ 162 (320)
T 3pl5_A 97 SQVNVGQFESYFRQSAENG-QEVLYIAFSSVLSG--TYQSAVMARDIVLE--EYPQASIEIVDTLAATGGE 162 (320)
T ss_dssp ECCCHHHHHHHHHHHHHTT-CCEEEEECCTTTCT--HHHHHHHHHHHHHH--HCTTCCEEEEECCCCHHHH
T ss_pred CCCCHHHHHHHHHHHHHCC-CeEEEEecCchHhH--HHHHHHHHHHHHHh--hCCCCeEEEEcCCchHHHH
Confidence 688876 5566777788 89999999644332 22233333344432 2566678999998765543
No 53
>3v4k_A DNA DC->DU-editing enzyme apobec-3G; antiviral defense, HOST-virus interaction, hydrola metal-binding, nucleus; HET: DNA; 1.38A {Homo sapiens} PDB: 3v4j_A* 3ir2_A* 2kem_A* 2jyw_A* 2kbo_A* 3e1u_A* 3iqs_A*
Probab=27.48 E-value=80 Score=28.66 Aligned_cols=64 Identities=14% Similarity=0.198 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHhccccCCCCEEEE-EecCcCCCCCCCCcHHHHHHHHhhcCCceEEEEcccccccchhhHHH
Q 015024 214 MEECVDLIMEELEKRKITNAYTLA-YQSRVGPVEWLKPYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEE 284 (414)
Q Consensus 214 ~~~t~~~l~e~l~~~~~~~~~~la-fQSr~G~~~WL~P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~E 284 (414)
|.+.|+.|++-|... .++++. |=||. =-| .|.-.+.|+.|.+.|+ .|.|+.+.=+.+|-+|.-|
T Consensus 111 C~~CA~~v~~FL~~~---~~v~L~If~aRL--Y~~-~~~~~~gLr~L~~aG~-~v~iM~~~ef~~CW~~FV~ 175 (203)
T 3v4k_A 111 CFSCAQEMAKFISKN---KHVSLCIKTARI--YDD-QGRCQEGLRTLAEAGA-KISIMTYSEFKHCWDTFVD 175 (203)
T ss_pred hHHHHHHHHHHHhhC---CCeEEEEEEEee--ccc-CchHHHHHHHHHHCCC-eEEecCHHHHHHHHHHHcc
Confidence 455677788777532 236554 66776 345 8899999999999985 7888888877788877665
No 54
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=25.77 E-value=54 Score=33.60 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=34.0
Q ss_pred CcHHHHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCe
Q 015024 250 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIE 299 (414)
Q Consensus 250 P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~ 299 (414)
+.+.++++++.+.|+| ++|+.=||- .+...+.++.+++.|..
T Consensus 47 ~~v~~~v~e~~~~Gv~-~viis~Gf~-------~~~~~~l~~~A~~~g~r 88 (480)
T 3dmy_A 47 EYAAELANQALDRNLN-VMMFSDNVT-------LEDEIQLKTRAREKGLL 88 (480)
T ss_dssp HHHHHHHHHHHHTTCE-EEECCCCCC-------HHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcCCC-EEEECCCCC-------HHHHHHHHHHHHHcCCE
Confidence 7889999999999998 888887776 35556788888888763
No 55
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=25.38 E-value=3.1e+02 Score=25.88 Aligned_cols=55 Identities=13% Similarity=0.158 Sum_probs=38.8
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhc
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELE 226 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~ 226 (414)
+++|-+|.....+++.|.+.|.+.++ +.. ..|- .+.+-|..++.+.-+.+++.+.
T Consensus 132 PHvWldp~n~~~~a~~I~~~L~~~DP-~~a----------~~Y~-~N~~~~~~~L~~Ld~~~~~~l~ 186 (312)
T 2o1e_A 132 PHVWLSPVLAQKEVKNITAQIVKQDP-DNK----------EYYE-KNSKEYIAKLQDLDKLYRTTAK 186 (312)
T ss_dssp CGGGGSHHHHHHHHHHHHHHHHHHCG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCHHHHHHHHHHHHHHHHHhCc-hhH----------HHHH-HHHHHHHHHHHHHHHHHHHHhh
Confidence 56899999999999999999987642 210 0112 4556688888777777777663
No 56
>2hl0_A Threonyl-tRNA synthetase; translation, editing, aminoacyl-tRNA synthetase, enzyme mechanism, enantioselectivity, ligase; HET: A3S; 1.86A {Pyrococcus abyssi} PDB: 2hkz_A 1y2q_A* 2hl2_A* 3pd2_A* 2hl1_A* 3pd3_A* 3pd4_A* 3pd5_A*
Probab=25.05 E-value=2e+02 Score=24.65 Aligned_cols=45 Identities=16% Similarity=0.249 Sum_probs=25.3
Q ss_pred hhcCCceEEEEcccccccchh---hHHHHHHHHHHHHHhcCCeeEEEcC
Q 015024 260 GQKGVKSLLAVPISFVSEHIE---TLEEIDVEYKELALKSGIEKWGRVP 305 (414)
Q Consensus 260 ~~~G~k~VvVvP~gFvsD~lE---Tl~Eid~e~~e~a~~~G~~~~~~vp 305 (414)
.+-|.++|++.|++=.|+.+. +=-++=.+..+..++.|. +..|+|
T Consensus 69 ~kv~~~~ivlYPyAHLSs~La~P~~A~~iL~~le~~L~~~g~-eV~raP 116 (143)
T 2hl0_A 69 EQVKAENVFVYPFAHLSSELAKPSVAMDILNRVYQGLKERGF-NVGKAP 116 (143)
T ss_dssp HHHTCCEEEEEECGGGCSSBCCHHHHHHHHHHHHHHHHHTTC-EEEECC
T ss_pred HhcCCCEEEEeccccccCccCChHHHHHHHHHHHHHHHhCCC-eEEEeC
Confidence 344788888888887777763 122222223333345565 355665
No 57
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.88 E-value=2e+02 Score=27.14 Aligned_cols=66 Identities=15% Similarity=0.180 Sum_probs=45.7
Q ss_pred CcHHHHHHH---HhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEE-cCC---CCCCHHHHHHHH
Q 015024 250 PYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGR-VPA---LGCEATFISDLA 318 (414)
Q Consensus 250 P~t~d~L~~---L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~-vp~---lNd~p~fi~~La 318 (414)
.+|.++++. ..+.|+..++++||.|..-.- .++-.-++.++...+..-+.| +|. .|-+++.+..|+
T Consensus 83 ~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~---~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 155 (300)
T 3eb2_A 83 TSVADAVAQAKLYEKLGADGILAILEAYFPLKD---AQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLA 155 (300)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEEECCSSCCCH---HHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH---HHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHH
Confidence 677777764 456699999999999876444 455556888888877764444 454 356676666664
No 58
>3fdj_A DEGV family protein; GUT microbiome, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE P6G PG4; 1.80A {Eubacterium eligens} SCOP: c.119.1.0
Probab=24.71 E-value=3.3e+02 Score=25.33 Aligned_cols=113 Identities=13% Similarity=0.113 Sum_probs=66.1
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEeCCCCCChHHHHHHHHHHH---
Q 015024 101 WHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIE--- 177 (414)
Q Consensus 101 ~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~--- 177 (414)
+.|+..+-.+.+. |.++|+++++.-.-| .|..+.....+.+.+ .+|+.+++++++-....+.--...+..+
T Consensus 61 Sqps~~~~~~~f~--~~~~ii~i~iSs~LS--GTy~sA~~aa~~~~e--e~~~~~I~ViDS~~~s~g~g~~v~~A~~~~~ 134 (278)
T 3fdj_A 61 ACPGIDAWLEAFG--DDDEIFVVTITAGMS--GTYNSAMAARAVYLE--EHPQAKVRVIDSKSTGPQMRIILEQLQQMIE 134 (278)
T ss_dssp ECCCHHHHHHHHT--TCSEEEEEESCTTTC--SHHHHHHHHHHHHHT--TCTTCEEEEEECSSCTHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHh--cCCcEEEEECCCcHh--HHHHHHHHHHHHHHh--hCCCCeEEEEcCCchhHHHHHHHHHHHHHHH
Confidence 6999998777664 789999999964332 233333334444432 2566789999998877664322221111
Q ss_pred ---------HHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccc
Q 015024 178 ---------KELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKR 228 (414)
Q Consensus 178 ---------~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~ 228 (414)
+.+++. .+++.+.|+...+ .+. .+|.. +-.++..+...|++.
T Consensus 135 ~G~s~~eI~~~l~~~--~~~~~~~f~v~~L--~~L-~kGGR----is~~~a~ig~lL~IK 185 (278)
T 3fdj_A 135 EGKKFEEIDGAIDAY--MQKTRLFCSLKSL--HNL-AQNGR----VSKVVASAAEVLGIS 185 (278)
T ss_dssp TTCCHHHHHHHHHHH--HTTEEEEEEESCC--HHH-HHTTS----SCHHHHHGGGSTTEE
T ss_pred cCCCHHHHHHHHHHH--HhcceEEEEECCh--HHH-HHCCc----chHHHHHHHHhhCcE
Confidence 111111 1456788888777 444 34433 445666777777654
No 59
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Probab=24.64 E-value=1.6e+02 Score=23.96 Aligned_cols=53 Identities=28% Similarity=0.483 Sum_probs=31.2
Q ss_pred CcHHHHHHHHhhcCCceEEEEcccccccchhhHHHH--HHHHHHHHHhcCCeeEEEcCCCC
Q 015024 250 PYTDETIIKLGQKGVKSLLAVPISFVSEHIETLEEI--DVEYKELALKSGIEKWGRVPALG 308 (414)
Q Consensus 250 P~t~d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Ei--d~e~~e~a~~~G~~~~~~vp~lN 308 (414)
|++.+-++.|.+.|++.|+=+.... |.-... -....+.+.+.|+. |..+|...
T Consensus 15 ~~~~~d~~~L~~~gi~~Vi~l~~~~-----e~~~~~~~~~~~~~~~~~~gi~-~~~~p~~d 69 (161)
T 2i6j_A 15 PYTENEILEWRKEGVKRVLVLPEDW-----EIEESWGDKDYYLSILKKNGLQ-PLHIPIPD 69 (161)
T ss_dssp CSSHHHHHHHHHHTCCEEEECSCHH-----HHHHHHSCHHHHHHHHHHTTCE-EEECCCCT
T ss_pred CCCHHHHHHHHHCCCCEEEEcCchh-----hhhhhccchhhHHHHHHHcCce-EEEecCCC
Confidence 5566678889999999988554221 110100 01123445678875 88998653
No 60
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=23.95 E-value=46 Score=24.91 Aligned_cols=14 Identities=36% Similarity=0.311 Sum_probs=7.4
Q ss_pred HHHHHHHHHhhccC
Q 015024 76 AQAEELRKSLWEKN 89 (414)
Q Consensus 76 ~qa~~L~~~L~~~~ 89 (414)
+.|+.+.+.|...|
T Consensus 21 ~~A~~l~~~L~~~G 34 (81)
T 1uta_A 21 EQAETVRAQLAFEG 34 (81)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCC
Confidence 44555566665444
No 61
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=23.92 E-value=3.6e+02 Score=23.45 Aligned_cols=73 Identities=10% Similarity=0.133 Sum_probs=47.6
Q ss_pred CCCc-----hHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHH
Q 015024 67 GSPL-----RRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLL 141 (414)
Q Consensus 67 gSPL-----~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~ 141 (414)
+||- ...|+++++.+.+.+.+.+ ..|+.-.-+..+.+.+..+++.+ +|.||+ -+|-|-.+.++..+..+
T Consensus 20 gsP~~~~s~~s~~~~l~~~~~~~~~~~g--~~v~~~dL~~~~d~~~~~~~l~~--AD~iV~--~~P~y~~s~pa~LK~~i 93 (204)
T 2amj_A 20 GAKKFAHSNGQLNDTLTEVADGTLRDLG--HDVRIVRADSDYDVKAEVQNFLW--ADVVIW--QMPGWWMGAPWTVKKYI 93 (204)
T ss_dssp CCC------CHHHHHHHHHHHHHHHHTT--CEEEEEESSSCCCHHHHHHHHHH--CSEEEE--EEECBTTBCCHHHHHHH
T ss_pred cCCCcccCcCcHHHHHHHHHHHHHHHcC--CEEEEEeCCccccHHHHHHHHHh--CCEEEE--ECCccccCCCHHHHHHH
Confidence 4666 2788899999998887655 44555555556778888888877 565543 23444556666666666
Q ss_pred HHHH
Q 015024 142 ESIF 145 (414)
Q Consensus 142 ~e~~ 145 (414)
++.+
T Consensus 94 Drv~ 97 (204)
T 2amj_A 94 DDVF 97 (204)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 62
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=23.79 E-value=2.1e+02 Score=27.28 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=44.0
Q ss_pred CCcHHHHHHH---HhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEE-cCC----CCCCHHHHHHHHH
Q 015024 249 KPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGR-VPA----LGCEATFISDLAD 319 (414)
Q Consensus 249 ~P~t~d~L~~---L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~-vp~----lNd~p~fi~~La~ 319 (414)
..+|.++++. ..+.|+..++++||.|...-. +-.+|-.-++.++...+..-+.| +|. .|-+++.+..|++
T Consensus 89 ~~~t~~ai~la~~a~~~Gadavlv~~P~y~~kp~-~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~ 166 (318)
T 3qfe_A 89 AHSTRQVLEHINDASVAGANYVLVLPPAYFGKAT-TPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIAR 166 (318)
T ss_dssp CSSHHHHHHHHHHHHHHTCSEEEECCCCC---CC-CHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCC-CHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHh
Confidence 4788888765 445699999999998764211 12355556788888777664444 452 4566776666654
No 63
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=23.28 E-value=2.9e+02 Score=25.68 Aligned_cols=77 Identities=21% Similarity=0.207 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHc---CCCEEEEEecCCcccccchHHHHHHHH
Q 015024 66 GGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRD---GITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 66 ggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~---G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.++.....++. +.++...+.-+..++|..|- +..+++++++..+.. |++-++++| |.|...|-....+.+.
T Consensus 45 GE~~~Ls~~Er~-~v~~~~~~~~~gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~ 119 (289)
T 2yxg_A 45 GESPTLSHEEHK-KVIEKVVDVVNGRVQVIAGA--GSNCTEEAIELSVFAEDVGADAVLSIT--PYYNKPTQEGLRKHFG 119 (289)
T ss_dssp TTGGGSCHHHHH-HHHHHHHHHHTTSSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cChhhCCHHHHH-HHHHHHHHHhCCCCcEEEeC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHH
Q ss_pred HHHHh
Q 015024 143 SIFRE 147 (414)
Q Consensus 143 e~~~~ 147 (414)
+..+.
T Consensus 120 ~ia~a 124 (289)
T 2yxg_A 120 KVAES 124 (289)
T ss_dssp HHHHH
T ss_pred HHHHh
No 64
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=23.21 E-value=2.7e+02 Score=26.00 Aligned_cols=77 Identities=18% Similarity=0.162 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHc---CCCEEEEEecCCcccccchHHHHHHHH
Q 015024 66 GGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRD---GITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 66 ggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~---G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.++.....++. +.++...+.-+..++|..|- +..+++++++..+.. |++-++++| |.|...|-....+.+.
T Consensus 46 GE~~~Ls~~Er~-~v~~~~~~~~~gr~pviaGv--g~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~s~~~l~~~f~ 120 (292)
T 2ojp_A 46 GESATLNHDEHA-DVVMMTLDLADGRIPVIAGT--GANATAEAISLTQRFNDSGIVGCLTVT--PYYNRPSQEGLYQHFK 120 (292)
T ss_dssp TTGGGSCHHHHH-HHHHHHHHHHTTSSCEEEEC--CCSSHHHHHHHHHHTTTSSCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cchhhCCHHHHH-HHHHHHHHHhCCCCcEEEec--CCccHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHH
Q ss_pred HHHHh
Q 015024 143 SIFRE 147 (414)
Q Consensus 143 e~~~~ 147 (414)
+..+.
T Consensus 121 ~ia~a 125 (292)
T 2ojp_A 121 AIAEH 125 (292)
T ss_dssp HHHTT
T ss_pred HHHHh
No 65
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=22.86 E-value=3.1e+02 Score=24.24 Aligned_cols=60 Identities=22% Similarity=0.174 Sum_probs=26.7
Q ss_pred HHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCHHHHHHHHHHHHH
Q 015024 254 ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGRVPALGCEATFISDLADAVIE 323 (414)
Q Consensus 254 d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p~fi~~La~lV~~ 323 (414)
+.-+.+.+.|.+-+.+-+... +.++ .+ .+.-+.|.+.|...++..| + .+..+.++++..+
T Consensus 65 ~~~~~l~~~gl~i~~~~~~~~--~~~~---~~-~~~i~~A~~lGa~~v~~~p--~--~~~l~~l~~~a~~ 124 (257)
T 3lmz_A 65 AFHDKCAAHKVTGYAVGPIYM--KSEE---EI-DRAFDYAKRVGVKLIVGVP--N--YELLPYVDKKVKE 124 (257)
T ss_dssp HHHHHHHHTTCEEEEEEEEEE--CSHH---HH-HHHHHHHHHHTCSEEEEEE--C--GGGHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEecccc--CCHH---HH-HHHHHHHHHhCCCEEEecC--C--HHHHHHHHHHHHH
Confidence 333445555764333333222 2333 32 2245666778876443322 2 2334445555443
No 66
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=22.51 E-value=4.5e+02 Score=24.10 Aligned_cols=28 Identities=11% Similarity=0.128 Sum_probs=22.8
Q ss_pred eecCCCCHHHHHHHHHHcCCCEEEEEec
Q 015024 98 MRYWHPFTEEAIEQIKRDGITKLVVLPL 125 (414)
Q Consensus 98 mry~~P~i~e~l~~l~~~G~~~IivlPL 125 (414)
+.+.....+++++++.+.|++++++...
T Consensus 22 ~~~h~~d~~~vl~~~~~~GV~~~v~~~~ 49 (301)
T 2xio_A 22 VQKHQDDLQDVIGRAVEIGVKKFMITGG 49 (301)
T ss_dssp EECSCCCHHHHHHHHHHHTEEEEEECCC
T ss_pred cccCccCHHHHHHHHHHCCCCEEEEeCC
Confidence 3444578899999999999999998743
No 67
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=22.22 E-value=2.9e+02 Score=25.46 Aligned_cols=137 Identities=14% Similarity=0.154 Sum_probs=77.7
Q ss_pred CCCCCChHHHHHHHHHHHHHHHhCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEe
Q 015024 160 PSWYQREGYITAMANLIEKELQNFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQ 239 (414)
Q Consensus 160 ~~~~~~p~yI~a~a~~I~~~l~~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQ 239 (414)
+++|-+|.....+++.|.+.|.+.++ +.. ..|- .+.+-|..++.+.-+.+++.+..-. +.--++|-
T Consensus 116 PH~Wldp~~~~~~a~~I~~~L~~~dP-~~a----------~~y~-~N~~~~~~~L~~Ld~~~~~~l~~~~--~~~~v~~H 181 (284)
T 2prs_A 116 MHLWLSPEIARATAVAIHGKLVELMP-QSR----------AKLD-ANLKDFEAQLASTETQVGNELAPLK--GKGYFVFH 181 (284)
T ss_dssp CCGGGCHHHHHHHHHHHHHHHHHHCG-GGH----------HHHH-HHHHHHHHHHHHHHHHHHHHHGGGT--TCCEEEEE
T ss_pred CcccCCHHHHHHHHHHHHHHHHHhCc-hhH----------HHHH-HHHHHHHHHHHHHHHHHHHHHhcCC--CCeEEEEC
Confidence 56889999999999999999987642 210 0112 4456688888777777777664211 11122222
Q ss_pred cC-------cC--------CCCCCCCcHH---HHHHHHhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeE
Q 015024 240 SR-------VG--------PVEWLKPYTD---ETIIKLGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKW 301 (414)
Q Consensus 240 Sr-------~G--------~~~WL~P~t~---d~L~~L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~ 301 (414)
.. +| ..+=.+|+.. +.++.+.+.|+ +++++-+.|-..-.+++ +++.|.+ .
T Consensus 182 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v-~~if~e~~~~~~~~~~i----------a~~~g~~-v 249 (284)
T 2prs_A 182 DAYGYFEKQFGLTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKA-TCVFAEPQFRPAVVESV----------ARGTSVR-M 249 (284)
T ss_dssp SCCHHHHHHHTCCCCEEEESSTTSCCCHHHHHHHHHHHHHTTC-CEEEECTTSCSHHHHHH----------TTTSCCE-E
T ss_pred ccHHHHHHHCCCeEeEeeccCCCCCCCHHHHHHHHHHHHHcCC-CEEEEeCCCChHHHHHH----------HHHcCCe-E
Confidence 11 11 1111356544 33333455565 45566677777666655 5588886 4
Q ss_pred EEcCCCCC-----CHHHHHHHHHHHH
Q 015024 302 GRVPALGC-----EATFISDLADAVI 322 (414)
Q Consensus 302 ~~vp~lNd-----~p~fi~~La~lV~ 322 (414)
..+..+.. ...++++|.+.+.
T Consensus 250 ~~ld~l~~~~~~~~~~Y~~~m~~n~~ 275 (284)
T 2prs_A 250 GTLDPLGTNIKLGKTSYSEFLSQLAN 275 (284)
T ss_dssp EECCTTCTTSCCSTTHHHHHHHHHHH
T ss_pred EEeccCcccCCCCcccHHHHHHHHHH
Confidence 44534443 1267777766554
No 68
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=22.18 E-value=3.1e+02 Score=25.72 Aligned_cols=77 Identities=12% Similarity=0.088 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHc---CCCEEEEEecCCcccccchHHHHHHHH
Q 015024 66 GGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRD---GITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 66 ggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~---G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.++.....++. +.++...+.-+..++|..|- +..+++++++..+.. |++-++++| |.|...|-....+.+.
T Consensus 56 GE~~~Ls~eEr~-~v~~~~~~~~~grvpViaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~ 130 (303)
T 2wkj_A 56 GEAFVQSLSERE-QVLEIVAEEAKGKIKLIAHV--GCVSTAESQQLAASAKRYGFDAVSAVT--PFYYPFSFEEHCDHYR 130 (303)
T ss_dssp TTGGGSCHHHHH-HHHHHHHHHHTTTSEEEEEC--CCSSHHHHHHHHHHHHHHTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cChhhCCHHHHH-HHHHHHHHHhCCCCcEEEec--CCCCHHHHHHHHHHHHhCCCCEEEecC--CCCCCCCHHHHHHHHH
Q ss_pred HHHHh
Q 015024 143 SIFRE 147 (414)
Q Consensus 143 e~~~~ 147 (414)
+..+.
T Consensus 131 ~va~a 135 (303)
T 2wkj_A 131 AIIDS 135 (303)
T ss_dssp HHHHH
T ss_pred HHHHh
No 69
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=21.82 E-value=3.3e+02 Score=25.39 Aligned_cols=77 Identities=18% Similarity=0.219 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHc---CCCEEEEEecCCcccccchHHHHHHHH
Q 015024 66 GGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRD---GITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 66 ggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~---G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.++.....++. +.++...+.-+..++|..|- +..+++++++..+.. |++-++++| |.|...|-....+.+.
T Consensus 45 GE~~~Ls~~Er~-~v~~~~~~~~~grvpviaGv--g~~~t~~ai~la~~A~~~Gadavlv~~--P~y~~~s~~~l~~~f~ 119 (294)
T 2ehh_A 45 GESPTLTFEEHE-KVIEFAVKRAAGRIKVIAGT--GGNATHEAVHLTAHAKEVGADGALVVV--PYYNKPTQRGLYEHFK 119 (294)
T ss_dssp TTGGGSCHHHHH-HHHHHHHHHHTTSSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cChhhCCHHHHH-HHHHHHHHHhCCCCcEEEec--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHH
Q ss_pred HHHHh
Q 015024 143 SIFRE 147 (414)
Q Consensus 143 e~~~~ 147 (414)
+..+.
T Consensus 120 ~va~a 124 (294)
T 2ehh_A 120 TVAQE 124 (294)
T ss_dssp HHHHH
T ss_pred HHHHh
No 70
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=21.72 E-value=4.6e+02 Score=23.86 Aligned_cols=85 Identities=13% Similarity=0.139 Sum_probs=48.2
Q ss_pred eEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCC--------CCCCCCcHHHHHHHHh
Q 015024 189 VMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGP--------VEWLKPYTDETIIKLG 260 (414)
Q Consensus 189 ~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~--------~~WL~P~t~d~L~~L~ 260 (414)
..+++..|..|-..- ..++.+.++..+..+.|+++.... +-.++|+-.=.| ..|. ....+.++.+.
T Consensus 79 i~Vild~h~~~~~~~-~~~~~~~~~~~~~w~~ia~~~k~~----~~vv~~el~NEP~~~~~~~~~~w~-~~~~~~~~~IR 152 (302)
T 1bqc_A 79 LICMLEVHDTTGYGE-QSGASTLDQAVDYWIELKSVLQGE----EDYVLINIGNEPYGNDSATVAAWA-TDTSAAIQRLR 152 (302)
T ss_dssp CEEEEEEGGGTTTTT-STTCCCHHHHHHHHHHTHHHHTTC----TTTEEEECSSSCCCSCHHHHTTHH-HHHHHHHHHHH
T ss_pred CEEEEEeccCCCCCC-CCchhhHHHHHHHHHHHHHHhcCC----CCEEEEEeCCCCCCCCCcchhhHH-HHHHHHHHHHH
Confidence 468889998764321 112346777777777788887432 113677542111 1132 34555666666
Q ss_pred hcCCceEEEEc-ccccccch
Q 015024 261 QKGVKSLLAVP-ISFVSEHI 279 (414)
Q Consensus 261 ~~G~k~VvVvP-~gFvsD~l 279 (414)
+.+-++++++. .+|..|.-
T Consensus 153 ~~dp~~~i~v~~~~~~~~~~ 172 (302)
T 1bqc_A 153 AAGFEHTLVVDAPNWGQDWT 172 (302)
T ss_dssp HTTCCSCEEEECTTTTTCTT
T ss_pred hcCCCcEEEECCCccccCch
Confidence 66777877775 34655543
No 71
>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*
Probab=21.62 E-value=2.5e+02 Score=23.29 Aligned_cols=65 Identities=14% Similarity=0.219 Sum_probs=35.9
Q ss_pred CcHHHHHHHHhhcCCceEEEEcccccccc-hhhHHHHHHHHHHHHHhcCCeeEEEcCCCCCCH--HHHHHHHHHHHHh
Q 015024 250 PYTDETIIKLGQKGVKSLLAVPISFVSEH-IETLEEIDVEYKELALKSGIEKWGRVPALGCEA--TFISDLADAVIES 324 (414)
Q Consensus 250 P~t~d~L~~L~~~G~k~VvVvP~gFvsD~-lETl~Eid~e~~e~a~~~G~~~~~~vp~lNd~p--~fi~~La~lV~~~ 324 (414)
|.. ..++.|+++|++-|+..- .+. .+...+ ..+.+.+.|++ +..+|+--.++ +-++.+.+.+.+.
T Consensus 28 p~~-a~a~~La~~Ga~vvi~~r----~~~e~~~~~~----~~~~~~~~G~~-~~~i~~Dv~~~~~~~v~~~~~~i~~~ 95 (157)
T 3gxh_A 28 PNE-QQFSLLKQAGVDVVINLM----PDSSKDAHPD----EGKLVTQAGMD-YVYIPVDWQNPKVEDVEAFFAAMDQH 95 (157)
T ss_dssp CCH-HHHHHHHHTTCCEEEECS----CTTSTTSCTT----HHHHHHHTTCE-EEECCCCTTSCCHHHHHHHHHHHHHT
T ss_pred CCH-HHHHHHHHcCCCEEEECC----Cccccccccc----HHHHHHHcCCe-EEEecCCCCCCCHHHHHHHHHHHHhc
Confidence 553 466778888986554321 111 110111 23334566774 78888866566 6666666666554
No 72
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=21.56 E-value=2.8e+02 Score=25.99 Aligned_cols=95 Identities=18% Similarity=0.226 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHH---HhhcCCceEEEEcccccccchhhHHHHHHH
Q 015024 212 AEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDVE 288 (414)
Q Consensus 212 ~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~---L~~~G~k~VvVvP~gFvsD~lETl~Eid~e 288 (414)
++-.+.++.+.+..+.. + ..+--.. | ..+|.++++. ..+.|+..++++||.|..-.- .++-.-
T Consensus 60 ~Er~~v~~~~~~~~~g~--r--vpviaGv--g-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~s~---~~l~~~ 125 (301)
T 3m5v_A 60 EEHRTCIEIAVETCKGT--K--VKVLAGA--G-----SNATHEAVGLAKFAKEHGADGILSVAPYYNKPTQ---QGLYEH 125 (301)
T ss_dssp HHHHHHHHHHHHHHTTS--S--CEEEEEC--C-----CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCH---HHHHHH
T ss_pred HHHHHHHHHHHHHhCCC--C--CeEEEeC--C-----CCCHHHHHHHHHHHHHcCCCEEEEcCCCCCCCCH---HHHHHH
Confidence 34455566666665420 1 2333322 3 4778888765 456799999999999876544 455556
Q ss_pred HHHHHHhcCCeeEEE-cC---CCCCCHHHHHHHHHH
Q 015024 289 YKELALKSGIEKWGR-VP---ALGCEATFISDLADA 320 (414)
Q Consensus 289 ~~e~a~~~G~~~~~~-vp---~lNd~p~fi~~La~l 320 (414)
+++++...+..-+.| +| -.|-+++.+..|++.
T Consensus 126 f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~ 161 (301)
T 3m5v_A 126 YKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRD 161 (301)
T ss_dssp HHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhc
Confidence 888888777764444 33 367788887777653
No 73
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=21.56 E-value=3.7e+02 Score=25.19 Aligned_cols=77 Identities=23% Similarity=0.253 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHHHHHHc---CCCEEEEEecCCcccccchHHHHHHHH
Q 015024 66 GGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIEQIKRD---GITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 66 ggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~~l~~~---G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.++.....++. +.++...+.-+..++|..|- +..+++++++..+.. |++-++++| |.|...|-....+.+.
T Consensus 61 GE~~~Ls~~Er~-~v~~~~~~~~~grvpviaGv--g~~st~~ai~la~~A~~~Gadavlv~~--P~y~~~~~~~l~~~f~ 135 (304)
T 3cpr_A 61 GESPTTTAAEKL-ELLKAVREEVGDRAKLIAGV--GTNNTRTSVELAEAAASAGADGLLVVT--PYYSKPSQEGLLAHFG 135 (304)
T ss_dssp TTTTTSCHHHHH-HHHHHHHHHHTTTSEEEEEC--CCSCHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cChhhCCHHHHH-HHHHHHHHHhCCCCcEEecC--CCCCHHHHHHHHHHHHhcCCCEEEECC--CCCCCCCHHHHHHHHH
Q ss_pred HHHHh
Q 015024 143 SIFRE 147 (414)
Q Consensus 143 e~~~~ 147 (414)
+..+.
T Consensus 136 ~ia~a 140 (304)
T 3cpr_A 136 AIAAA 140 (304)
T ss_dssp HHHHH
T ss_pred HHHHh
No 74
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.30 E-value=3.7e+02 Score=25.11 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=0.0
Q ss_pred CCCCchHHHHHHHHHHHHHhhccCCCceEEEeeecCCCCHHHHHH---HHHHcCCCEEEEEecCCcccccchHHHHHHHH
Q 015024 66 GGSPLRRITDAQAEELRKSLWEKNLPAKVYVGMRYWHPFTEEAIE---QIKRDGITKLVVLPLYPQFSISTSGSSLRLLE 142 (414)
Q Consensus 66 ggSPL~~~T~~qa~~L~~~L~~~~~~~~V~~amry~~P~i~e~l~---~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~ 142 (414)
|.++.....++. +.++...+.-+..++|..| -+..+++++++ ...+.|++-+.++| |.|...|-....+.+.
T Consensus 52 GE~~~Ls~~Er~-~v~~~~~~~~~grvpviaG--vg~~~t~~ai~la~~a~~~Gadavlv~~--P~y~~~~~~~l~~~f~ 126 (297)
T 3flu_A 52 GESATLSVEEHT-AVIEAVVKHVAKRVPVIAG--TGANNTVEAIALSQAAEKAGADYTLSVV--PYYNKPSQEGIYQHFK 126 (297)
T ss_dssp TTGGGSCHHHHH-HHHHHHHHHHTTSSCEEEE--CCCSSHHHHHHHHHHHHHTTCSEEEEEC--CCSSCCCHHHHHHHHH
T ss_pred cCcccCCHHHHH-HHHHHHHHHhCCCCcEEEe--CCCcCHHHHHHHHHHHHHcCCCEEEECC--CCCCCCCHHHHHHHHH
Q ss_pred HHHHh
Q 015024 143 SIFRE 147 (414)
Q Consensus 143 e~~~~ 147 (414)
+..+.
T Consensus 127 ~va~a 131 (297)
T 3flu_A 127 TIAEA 131 (297)
T ss_dssp HHHHH
T ss_pred HHHHh
No 75
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=21.05 E-value=2.7e+02 Score=26.40 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=47.8
Q ss_pred CCcHHHHHHH---HhhcCCceEEEEcccccccchhhHHHHHHHHHHHHHhcCCeeEEE-cC---CCCCCHHHHHHHHH
Q 015024 249 KPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDVEYKELALKSGIEKWGR-VP---ALGCEATFISDLAD 319 (414)
Q Consensus 249 ~P~t~d~L~~---L~~~G~k~VvVvP~gFvsD~lETl~Eid~e~~e~a~~~G~~~~~~-vp---~lNd~p~fi~~La~ 319 (414)
..+|.++++. ..+.|+..++++||.|..-.-| +|-.-++.++...+..-+.| +| -.|-+++.+..|++
T Consensus 100 ~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~---~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 174 (315)
T 3si9_A 100 SNSTSEAVELAKHAEKAGADAVLVVTPYYNRPNQR---GLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCR 174 (315)
T ss_dssp CSSHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHH---HHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHH---HHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHh
Confidence 4778888765 4567999999999998765444 55556888888777765544 33 35777777666654
No 76
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=20.75 E-value=4.9e+02 Score=23.87 Aligned_cols=133 Identities=11% Similarity=0.193 Sum_probs=79.7
Q ss_pred CCCHHHHHHHHHHcCCCEEEEEecCCcccccchHHHHHHHHHHHHhccccCCcceEEeCCCCCChHHHHHHHHHHHHHHH
Q 015024 102 HPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLESIFREDEYLVNMQHTVIPSWYQREGYITAMANLIEKELQ 181 (414)
Q Consensus 102 ~P~i~e~l~~l~~~G~~~IivlPLyPqyS~~Ttgs~~~~~~e~~~~~~~~~~~~~~~i~~~~~~p~yI~a~a~~I~~~l~ 181 (414)
.+..++-++.|++.|++.|-+ |+. ++.. .+. -.+|..+|.+++.+-+.|..+.+
T Consensus 40 ~~~~~~d~~~l~~~G~n~vRi-~i~--w~~~------------------~~~-----~~~~~~~~~~~~~~d~~v~~a~~ 93 (320)
T 3nco_A 40 VYIEDEYFKIIKERGFDSVRI-PIR--WSAH------------------ISE-----KYPYEIDKFFLDRVKHVVDVALK 93 (320)
T ss_dssp CCCCHHHHHHHHHHTCCEEEE-CCC--GGGS------------------BCS-----STTCCBCHHHHHHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHHCCCCEEEE-eee--hHHh------------------cCC-----CCCCccCHHHHHHHHHHHHHHHH
Confidence 355688899999999998776 432 1100 000 12355678787777666665543
Q ss_pred hCCCCCceEEEEeecCChhhhhcccCCchHHHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCC-------CcHHH
Q 015024 182 NFDSPEQVMIFFSAHGVPLAYVEEAGDPYKAEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLK-------PYTDE 254 (414)
Q Consensus 182 ~~~~~~~~~LlfSaHgiP~~~i~~~GDpY~~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~-------P~t~d 254 (414)
. ...+++..|+.+--.- +.+.+.+...+..+.|++++... +-.++|+- +-+++.. +...+
T Consensus 94 -~----Gi~vildlh~~~~~~~--~~~~~~~~~~~~~~~ia~~~~~~----~~vv~~~l--~NEP~~~~~~~~~~~~~~~ 160 (320)
T 3nco_A 94 -N----DLVVIINCHHFEELYQ--APDKYGPVLVEIWKQVAQAFKDY----PDKLFFEI--FNEPAQNLTPTKWNELYPK 160 (320)
T ss_dssp -T----TCEEEEECCCCHHHHH--CHHHHHHHHHHHHHHHHHHHTTS----CTTEEEEC--CSCCCTTSCHHHHHHHHHH
T ss_pred -C----CCEEEEEcCCCccccc--CcHHHHHHHHHHHHHHHHHHcCC----CceEEEEe--ccCCCCCCCHHHHHHHHHH
Confidence 2 3468899999874332 22237777777778888887532 22467865 3344432 12444
Q ss_pred HHHHHhhcCCceEEEEccc
Q 015024 255 TIIKLGQKGVKSLLAVPIS 273 (414)
Q Consensus 255 ~L~~L~~~G~k~VvVvP~g 273 (414)
.++.+.+.+-++.+++...
T Consensus 161 ~~~~IR~~dp~~~i~v~~~ 179 (320)
T 3nco_A 161 VLGEIRKTNPSRIVIIDVP 179 (320)
T ss_dssp HHHHHHHHCSSCCEEEECS
T ss_pred HHHHHHhcCCCcEEEECCC
Confidence 5555555577777777644
No 77
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=20.56 E-value=2.2e+02 Score=26.66 Aligned_cols=93 Identities=14% Similarity=0.189 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHhccccCCCCEEEEEecCcCCCCCCCCcHHHHHHH---HhhcCCceEEEEcccccccchhhHHHHHHH
Q 015024 212 AEMEECVDLIMEELEKRKITNAYTLAYQSRVGPVEWLKPYTDETIIK---LGQKGVKSLLAVPISFVSEHIETLEEIDVE 288 (414)
Q Consensus 212 ~~~~~t~~~l~e~l~~~~~~~~~~lafQSr~G~~~WL~P~t~d~L~~---L~~~G~k~VvVvP~gFvsD~lETl~Eid~e 288 (414)
++-.+.++.+.+..+.+ ..+--. .| ..+|.++++. ..+.|+..++++||.|..-.-| +|-.-
T Consensus 55 ~Er~~v~~~~~~~~~gr-----vpviaG--vg-----~~~t~~ai~la~~a~~~Gadavlv~~P~y~~~~~~---~l~~~ 119 (292)
T 3daq_A 55 DEKELILKTVIDLVDKR-----VPVIAG--TG-----TNDTEKSIQASIQAKALGADAIMLITPYYNKTNQR---GLVKH 119 (292)
T ss_dssp HHHHHHHHHHHHHHTTS-----SCEEEE--CC-----CSCHHHHHHHHHHHHHHTCSEEEEECCCSSCCCHH---HHHHH
T ss_pred HHHHHHHHHHHHHhCCC-----CcEEEe--CC-----cccHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHH---HHHHH
Confidence 44455666666665422 222222 23 4778888765 4556999999999998765444 55556
Q ss_pred HHHHHHhcCCeeEEE-cC---CCCCCHHHHHHHHH
Q 015024 289 YKELALKSGIEKWGR-VP---ALGCEATFISDLAD 319 (414)
Q Consensus 289 ~~e~a~~~G~~~~~~-vp---~lNd~p~fi~~La~ 319 (414)
++.++...+..-+.| +| -.|-+++.+..|++
T Consensus 120 f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~ 154 (292)
T 3daq_A 120 FEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQ 154 (292)
T ss_dssp HHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHT
T ss_pred HHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhc
Confidence 888888777765544 33 36778888777765
Done!