BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 015026
(414 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 8/302 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DAA ++RQ+L
Sbjct: 84 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGIT 140
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL
Sbjct: 141 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 200
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+ DVWS GVI YILL G PF E I K+V + K F W +S SAKD
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQF 389
++K+L P R++A AL H W+ + +I +D+ L+ N+RQF +L Q
Sbjct: 261 LIRKMLTYVPSMRISARDALDHEWI-QTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQA 319
Query: 390 AL 391
AL
Sbjct: 320 AL 321
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 8/302 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 48 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DAA ++RQ+L
Sbjct: 108 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGIT 164
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL
Sbjct: 165 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 224
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+ DVWS GVI YILL G PF E I K+V + K F W +S SAKD
Sbjct: 225 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 284
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQF 389
++K+L P R++A AL H W++ +I +D+ L+ N+RQF +L Q
Sbjct: 285 LIRKMLTYVPSMRISARDALDHEWIQT-YTKEQISVDVPSLDNAILNIRQFQGTQKLAQA 343
Query: 390 AL 391
AL
Sbjct: 344 AL 345
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 174/302 (57%), Gaps = 8/302 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 47 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DAA ++RQ+L
Sbjct: 107 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGIT 163
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL
Sbjct: 164 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 223
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+ DVWS GVI YILL G PF E I K+V + K F W +S SAKD
Sbjct: 224 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 283
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQF 389
++K+L P R++A AL H W++ +I +D+ L+ N+RQF +L Q
Sbjct: 284 LIRKMLTYVPSMRISARDALDHEWIQT-YTKEQISVDVPSLDNAILNIRQFQGTQKLAQA 342
Query: 390 AL 391
AL
Sbjct: 343 AL 344
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/315 (39%), Positives = 172/315 (54%), Gaps = 16/315 (5%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK----NKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K NK
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-----DT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +K R++E D
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHD 122
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
AA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS + K +D
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
+G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V K F
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR----EGGDASEIPIDISVLNN 376
W +IS+ AKD ++K+L P R+TA Q L HPW++ E S++P S + N
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTN 302
Query: 377 MRQFVKYSRLKQFAL 391
+RQF +L Q AL
Sbjct: 303 IRQFQAEKKLAQAAL 317
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/302 (40%), Positives = 172/302 (56%), Gaps = 8/302 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+ K Y FED Y Y+ E+ GGEL D I+++K R++E DAA ++RQ+L
Sbjct: 84 -DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGIT 140
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL
Sbjct: 141 YXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVL 200
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+ DVWS GVI YILL G PF E I K+V + K F W +S SAKD
Sbjct: 201 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 260
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLN----NMRQFVKYSRLKQF 389
++K L P R++A AL H W++ +I +D+ L+ N+RQF +L Q
Sbjct: 261 LIRKXLTYVPSXRISARDALDHEWIQTYT-KEQISVDVPSLDNAILNIRQFQGTQKLAQA 319
Query: 390 AL 391
AL
Sbjct: 320 AL 321
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 170/299 (56%), Gaps = 7/299 (2%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY K LG G +G + DK G A+K I+K+ + + EV +L+ L H
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL-DH 63
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N++K Y FED Y+ ME+ GGEL D I+ ++ +++E DAAV+++Q+L H
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVLSGTTYLH 121
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
H +VHRD+KPEN L +S D+ +K DFGLS + G K ++ +G+AYY+APEVL++K
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKK 181
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+ DVWS GVI YILLCG PF +T+ I K V + K F W +S+ AK VK
Sbjct: 182 YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVK 241
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIPID----ISVLNNMRQFVKYSRLKQFAL 391
+L +P R++A +AL+HPW+ + + L NM++F +L Q A+
Sbjct: 242 LMLTYEPSKRISAEEALNHPWIVKFCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAM 300
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 160/268 (59%), Gaps = 12/268 (4%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV---KREVKI 149
D ++ YT+ +G G +G +A K R A KKI K VEDV K+E++I
Sbjct: 23 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK------YFVEDVDRFKQEIEI 76
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K+ R E DAA +++ +L
Sbjct: 77 MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVL 133
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
A CH + HRD+KPENFLF + DS LK DFGL+ KPGK + VG+ YYV+
Sbjct: 134 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 193
Query: 270 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++ F K W ++S
Sbjct: 194 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 253
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPW 357
A+ +++LL K P+ R+T+ QAL H W
Sbjct: 254 QAESLIRRLLTKSPKQRITSLQALEHEW 281
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/268 (41%), Positives = 160/268 (59%), Gaps = 12/268 (4%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV---KREVKI 149
D ++ YT+ +G G +G +A K R A KKI K VEDV K+E++I
Sbjct: 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK------YFVEDVDRFKQEIEI 59
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
+++L H N+++ Y FED+ +Y+ MELC GGEL +R++ K+ R E DAA +++ +L
Sbjct: 60 MKSL-DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFR--ESDAARIMKDVL 116
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
A CH + HRD+KPENFLF + DS LK DFGL+ KPGK + VG+ YYV+
Sbjct: 117 SAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVS 176
Query: 270 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
P+VL+ GPE D WS GV+ Y+LLCG PF T+ + ++ F K W ++S
Sbjct: 177 PQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSP 236
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPW 357
A+ +++LL K P+ R+T+ QAL H W
Sbjct: 237 QAESLIRRLLTKSPKQRITSLQALEHEW 264
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 211 bits (538), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/294 (39%), Positives = 174/294 (59%), Gaps = 8/294 (2%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G +G + DK A+K I K + + + EV +L+ L H N++K
Sbjct: 43 KKLGSGAYGEVLLCRDKVTHVERAIKIIRKTS-VSTSSNSKLLEEVAVLKLL-DHPNIMK 100
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y+ FED Y+ ME +GGEL D I+ + ++ E DAAV+++Q+L H H +V
Sbjct: 101 LYDFFEDKRNYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
HRD+KPEN L +S ++D+ +K DFGLS + KK ++ +G+AYY+APEVL++K +
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKC 218
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
DVWSIGVI +ILL G PF +T+ I ++V + K F W ++S AKD +K++L
Sbjct: 219 DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQF 278
Query: 342 DPRARLTAAQALSHPWVREGGDASEIPIDI----SVLNNMRQFVKYSRLKQFAL 391
D + R++A QAL HPW++E E I++ + + NMR+F +L Q AL
Sbjct: 279 DSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAAL 332
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 211 bits (536), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 111/266 (41%), Positives = 157/266 (59%), Gaps = 3/266 (1%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F RY ++LG G FG + DK G AVK I K ++ E + REV++L+ L
Sbjct: 30 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++K Y FED Y Y+ E+ GGEL D I+++K R++E DAA ++RQ+L
Sbjct: 90 -DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGIT 146
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + +VHRD+KPEN L +S +D++++ DFGLS + KK +D +G+AYY+APEVL
Sbjct: 147 YMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVL 206
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
+ DVWS GVI YILL G PF E I K+V + K F W +S SAKD
Sbjct: 207 HGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKD 266
Query: 334 FVKKLLVKDPRARLTAAQALSHPWVR 359
++K+L P R++A AL H W++
Sbjct: 267 LIRKMLTYVPSMRISARDALDHEWIQ 292
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 171/298 (57%), Gaps = 7/298 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D + + + LG G F +A +KA G AVK I K L ++ E+ +L+
Sbjct: 18 EDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKA--LKGKESSIENEIAVLR 75
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ HEN+V + +E N++Y+ M+L GGEL DRI+ K YTEKDA+ ++RQ+L
Sbjct: 76 KIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEK--GFYTEKDASTLIRQVLDA 132
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H G+VHRD+KPEN L+ S E+S + +DFGLS G G+ YVAPE
Sbjct: 133 VYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPE 192
Query: 272 VLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
VL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+S
Sbjct: 193 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDS 252
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
AKDF++ L+ KDP R T QA HPW+ G A I SV +R+ S+ +Q
Sbjct: 253 AKDFIRNLMEKDPNKRYTCEQAARHPWIA-GDTALNKNIHESVSAQIRKNFAKSKWRQ 309
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 159/269 (59%), Gaps = 3/269 (1%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
Y + RY K LG G +G + DK G A+K I+K+ + + EV +
Sbjct: 15 YFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAV 74
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
L+ L H N++K Y FED Y+ ME+ GGEL D I+ ++ +++E DAAV+++Q+L
Sbjct: 75 LKQL-DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQ--KFSEVDAAVIMKQVL 131
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H H +VHRD+KPEN L +S D+ +K DFGLS + G K ++ +G+AYY+A
Sbjct: 132 SGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIA 191
Query: 270 PEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
PEVL++K + DVWS GVI YILLCG PF +T+ I K V + K F W +S+
Sbjct: 192 PEVLRKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSD 251
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWV 358
AK VK +L +P R++A +AL+HPW+
Sbjct: 252 EAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 12/279 (4%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK----NKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K NK
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-----DT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +K R++E D
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHD 122
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
AA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS + K +D
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
+G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V K F
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
W +IS+ AKD ++K+L P R+TA Q L HPW++
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/279 (40%), Positives = 155/279 (55%), Gaps = 12/279 (4%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK----NKMILPIAV 140
R + + F RY I +LG G FG D+ AVK I K NK
Sbjct: 11 RENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNK-----DT 65
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+ REV++L+ L H N++K + ED + YI EL GGEL D I+ +K R++E D
Sbjct: 66 STILREVELLKKL-DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHD 122
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
AA +++Q+ H H +VHRD+KPEN L +S ++D +K DFGLS + K +D
Sbjct: 123 AARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKD 182
Query: 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
+G+AYY+APEVL+ + DVWS GVI YILL G PF+ K E I K V K F
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFD 242
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
W +IS+ AKD ++K+L P R+TA Q L HPW++
Sbjct: 243 LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/264 (40%), Positives = 160/264 (60%), Gaps = 8/264 (3%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+ + ++LG G F ++ + G A+K I+K+ ++E+ E+ +L+ +
Sbjct: 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLEN---EIAVLKKIK- 64
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
HEN+V + +E + Y+ M+L GGEL DRIL + YTEKDA++V++Q+L
Sbjct: 65 HENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYL 122
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 275
H +G+VHRD+KPEN L+ + +E+S + TDFGLS + G G+ YVAPEVL +
Sbjct: 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI-MSTACGTPGYVAPEVLAQ 181
Query: 276 KSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
K ++ D WSIGVITYILLCG PF+++TE +F+++ +F W IS SAKDF
Sbjct: 182 KPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDF 241
Query: 335 VKKLLVKDPRARLTAAQALSHPWV 358
+ LL KDP R T +ALSHPW+
Sbjct: 242 ICHLLEKDPNERYTCEKALSHPWI 265
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 166/292 (56%), Gaps = 7/292 (2%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++ Q+L H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD 134
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G+VHRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 278 GPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
L+ KDP R T QAL HPW+ G A + I SV +++ S+ KQ
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 116/292 (39%), Positives = 166/292 (56%), Gaps = 7/292 (2%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++ Q+L H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD 134
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G+VHRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 278 GPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
L+ KDP R T QAL HPW+ G A + I SV +++ S+ KQ
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 305
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 202 bits (513), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 170/309 (55%), Gaps = 16/309 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +LG G F +A DK VA+K I K L ++ E+ +L + H
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKA--LEGKEGSMENEIAVLHKIK-HP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++ Q+L H
Sbjct: 77 NIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHD 134
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
G+VHRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPEVL +K
Sbjct: 135 LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP 194
Query: 278 GPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+SAKDF++
Sbjct: 195 YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIR 254
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFA-LRVTQ 395
L+ KDP R T QAL HPW+ D ++ N+ Q V K FA + Q
Sbjct: 255 HLMEKDPEKRFTCEQALQHPWIAG---------DTALDKNIHQSVSEQIKKNFAKSKWKQ 305
Query: 396 YFKYTALFK 404
F TA+ +
Sbjct: 306 AFNATAVVR 314
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 201 bits (510), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 111/275 (40%), Positives = 158/275 (57%), Gaps = 8/275 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D Y +LG G F +A DK VA+K I K L ++ E+ +L
Sbjct: 14 EDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEA--LEGKEGSMENEIAVLH 71
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ H N+V + +E ++Y+ M+L GGEL DRI+ K YTE+DA+ ++ Q+L
Sbjct: 72 KIK-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDA 128
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
H G+VHRD+KPEN L+ S EDS + +DFGLS PG G+ YVAPE
Sbjct: 129 VKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPE 188
Query: 272 VLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
VL +K ++ D WSIGVI YILLCG PF+D+ + +F+++L+ + +F W IS+S
Sbjct: 189 VLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDS 248
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365
AKDF++ L+ KDP R T QAL HPW+ GD +
Sbjct: 249 AKDFIRHLMEKDPEKRFTCEQALQHPWI--AGDTA 281
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 111/302 (36%), Positives = 169/302 (55%), Gaps = 18/302 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEK-----------NKMILPIAVEDVKREVKILQA 152
LG G +G + +K A+K I+K NK I E++ E+ +L++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFH-EEIYNEISLLKS 102
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
L H N++K ++ FED Y Y+ E EGGEL ++I+ + ++ E DAA +++Q+L
Sbjct: 103 L-DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGI 159
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
H H +VHRD+KPEN L ++ ++K DFGLS F K +D +G+AYY+APEV
Sbjct: 160 CYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV 219
Query: 273 LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
LK+K + DVWS GVI YILLCG PF + + I K+V + K F W +IS+ AK
Sbjct: 220 LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAK 279
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGG---DASEIPIDISVLNNMRQFVKYSRLKQF 389
+ +K +L D R TA +AL+ W+++ + S+ L+NMR+F +L Q
Sbjct: 280 ELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQA 339
Query: 390 AL 391
A+
Sbjct: 340 AI 341
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/257 (40%), Positives = 151/257 (58%), Gaps = 10/257 (3%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G Y K A+K ++K + + V+ E+ +L L+ H N++K
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKT-----VDKKIVRTEIGVLLRLS-HPNIIKLK 114
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
FE + + +EL GGEL DRI+ K Y+E+DAA V+Q+L A H +G+VHR
Sbjct: 115 EIFETPTEISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHR 172
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESD 282
D+KPEN L+ + D+ LK DFGLS ++ + + G+ Y APE+L+ + GPE D
Sbjct: 173 DLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVD 232
Query: 283 VWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
+WS+G+ITYILLCG PF+D+ D +F+ +L + F W +S +AKD V+KL+V
Sbjct: 233 MWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVL 292
Query: 342 DPRARLTAAQALSHPWV 358
DP+ RLT QAL HPWV
Sbjct: 293 DPKKRLTTFQALQHPWV 309
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/279 (33%), Positives = 160/279 (57%), Gaps = 6/279 (2%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
R + + D + + LG G FG ++ ++++G +K I K++ +P+ E ++
Sbjct: 11 RENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPM--EQIE 68
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAA 202
E+++L++L H N++K + FED + +YI ME CEGGELL+RI++ + +E A
Sbjct: 69 AEIEVLKSL-DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVA 127
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
+++QM+ A H +VH+D+KPEN LF+ S +K DFGL++ K + +
Sbjct: 128 ELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAA 187
Query: 263 GSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
G+A Y+APEV KR + D+WS GV+ Y LL G PF + + + ++ +P++ +
Sbjct: 188 GTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE 247
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
P ++ A D +K++L KDP R +AAQ L H W ++
Sbjct: 248 CRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 174 bits (441), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 3 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 62
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 63 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 118
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 178
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 179 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 238
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 239 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 279
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 119
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 119
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 4 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 63
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 64 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 119
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 179
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 239
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 240 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 280
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/267 (37%), Positives = 155/267 (58%), Gaps = 8/267 (2%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y +G+ LG GQF K G A K I+K ++ ++ E+++REV IL+ +
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ ++ FE+ V + +EL GGEL D LA+K+S TE +A ++Q+L
Sbjct: 67 -HPNIITLHDIFENKTDVVLILELVSGGELFD-FLAEKES-LTEDEATQFLKQILDGVHY 123
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L + +K DFG++ I+ G +F++I G+ +VAPE++
Sbjct: 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF +T+ + DF + + + S AK
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 243
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
DF+++LLVKDP+ R+T AQ+L H W++
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIK 270
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA+K I K K + A E +V+
Sbjct: 10 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVE 69
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 70 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 125
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 185
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 186 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 245
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 246 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 286
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 157/273 (57%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
+D + Y +G+ LG GQF K G A K I+K ++ ++ E+++REV
Sbjct: 8 EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H N++ ++ FE+ V + +EL GGEL D LA+K+S TE +A ++Q+
Sbjct: 68 ILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFD-FLAEKES-LTEDEATQFLKQI 124
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L + +K DFG++ I+ G +F++I G+ +
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEF 184
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF +T+ + DF + + +
Sbjct: 185 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSN 244
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+ AQ+L H W++
Sbjct: 245 TSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA++ I K K + A E +V+
Sbjct: 143 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 202
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 203 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 258
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 318
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 319 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 378
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 379 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 419
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 172 bits (435), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/281 (36%), Positives = 152/281 (54%), Gaps = 14/281 (4%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE-----DVK 144
Y K Y + K LG G G +A ++ +VA++ I K K + A E +V+
Sbjct: 129 YPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVE 188
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
E++IL+ L H ++K N F+ ++Y YI +EL EGGEL D+++ K R E +
Sbjct: 189 TEIEILKKL-NHPCIIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNK--RLKEATCKLY 244
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
QML H +G++HRD+KPEN L S +ED +K TDFG S + + + G+
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGT 304
Query: 265 AYYVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF 319
Y+APEVL D WS+GVI +I L G PF + +T+ + ++ K +F
Sbjct: 305 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNF 364
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ W +S A D VKKLLV DP+AR T +AL HPW+++
Sbjct: 365 IPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 154/267 (57%), Gaps = 8/267 (2%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y +G+ LG GQF K G A K I+K ++ ++ E+++REV IL+ +
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ ++ FE+ V + +EL GGEL D LA+K+S TE +A ++Q+L
Sbjct: 88 -HPNIITLHDIFENKTDVVLILELVSGGELFD-FLAEKES-LTEDEATQFLKQILDGVHY 144
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L + +K DFG++ I+ G +F++I G+ +VAPE++
Sbjct: 145 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF +T+ + DF + + + S AK
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
DF+++LLVKDP+ R+ AQ+L H W++
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWIK 291
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 165/295 (55%), Gaps = 12/295 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA 154
Y + + LG G F G A K I K+ + D ++RE +I + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARICRLLK 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 62 -HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESVNH 118
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVL 273
CHL+G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 387
D + K+L +P R+TA++AL HPW+ + + + ++ +++F +LK
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/295 (31%), Positives = 165/295 (55%), Gaps = 12/295 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA 154
Y + + LG G F G A K I K+ + D ++RE +I + L
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKL----SARDHQKLEREARICRLLK 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 62 -HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILESVNH 118
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVL 273
CHL+G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL
Sbjct: 119 CHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AK
Sbjct: 179 RKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 387
D + K+L +P R+TA++AL HPW+ + + + ++ +++F +LK
Sbjct: 239 DLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLK 293
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 170 bits (431), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/298 (35%), Positives = 165/298 (55%), Gaps = 9/298 (3%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYS 384
S AKDF+++LLVKDP+ R+T +L HPW++ + S + NM +F K++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAV-NMEKFKKFA 300
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 8/266 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A ++Q+L
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNY 130
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF T+ + DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
DF++KLLVK+ R RLT +AL HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 170 bits (430), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 8/266 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A ++Q+L
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNY 130
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF T+ + DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
DF++KLLVK+ R RLT +AL HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/286 (32%), Positives = 159/286 (55%), Gaps = 9/286 (3%)
Query: 77 TGVIPCGKRTDFGYDKD--FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM 134
TG G+ ++F + F Y + + LG G F K G A K I K+
Sbjct: 8 TGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL 67
Query: 135 ILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS 194
+ ++RE +I + L H N+V+ +++ +++++ Y+ +L GGEL + I+A++
Sbjct: 68 SAR-DFQKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE-- 123
Query: 195 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
Y+E DA+ ++Q+L A CH +G+VHR++KPEN L S + +++K DFGL+ +
Sbjct: 124 FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183
Query: 255 GKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
+ + G+ Y++PEVLK+ S P D+W+ GVI YILL G PFWD+ + ++ ++
Sbjct: 184 SEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQI 242
Query: 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
D+ W +++ AK + +L +P+ R+TA QAL PW+
Sbjct: 243 KAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 8/266 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A ++Q+L
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNY 130
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF T+ + DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
DF++KLLVK+ R RLT +AL HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 169 bits (429), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 8/266 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A ++Q+L
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNY 130
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF T+ + DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
DF++KLLVK+ R RLT +AL HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 152/266 (57%), Gaps = 8/266 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + ++ E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H NV+ ++ +E+ V + +EL GGEL D LA+K+S +E++A ++Q+L
Sbjct: 74 -HHNVITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNY 130
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF T+ + DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
DF++KLLVK+ R RLT +AL HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/266 (37%), Positives = 151/266 (56%), Gaps = 8/266 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALA 154
Y IG+ LG GQF +K+ G A K I+K + + E+++REV IL+ +
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ ++ +E+ V + +EL GGEL D LA+K+S +E++A ++Q+L
Sbjct: 74 -HPNIITLHDVYENRTDVVLILELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNY 130
Query: 215 CHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + H D+KPEN L +K DFGL+ I+ G +F++I G+ +VAPE++
Sbjct: 131 LHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ G E+D+WSIGVITYILL G PF T+ + DF + + S AK
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
DF++KLLVK+ R RLT +AL HPW+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 169 bits (427), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 152/270 (56%), Gaps = 12/270 (4%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F Y + + LG G F G A K I K+ + D ++RE +I
Sbjct: 20 FQSMYQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKL----SARDHQKLEREARIC 75
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 76 RLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILE 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVA 269
CH G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++
Sbjct: 133 AVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 192
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++
Sbjct: 193 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 252
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
AKD + K+L +P R+TAA+AL HPW+
Sbjct: 253 PEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 154/279 (55%), Gaps = 18/279 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQAL 153
Y I + LG G FG + T++A G+ A K + E +K E V++E++ + L
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-------ETVRKEIQTMSVL 105
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H +V ++AFEDDN + + E GGEL +++ A + ++ +E +A +RQ+ +
Sbjct: 106 R-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A + APEV
Sbjct: 164 HMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ K G +D+WS+GV++YILL G PF + +D + V + + IS K
Sbjct: 223 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 282
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 368
DF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 283 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 122
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 66 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 122
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 183 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 242
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 243 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 168 bits (426), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 154/279 (55%), Gaps = 18/279 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI----EKNKMILPIAVEDVKREVKILQAL 153
Y I + LG G FG + T++A G+ A K + E +K E V++E++ + L
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK-------ETVRKEIQTMSVL 211
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H +V ++AFEDDN + + E GGEL +++ A + ++ +E +A +RQ+ +
Sbjct: 212 R-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H + VH D+KPEN +F + K + LK DFGL+ + P + + G+A + APEV
Sbjct: 270 HMHENNYVHLDLKPENIMF-TTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ K G +D+WS+GV++YILL G PF + +D + V + + IS K
Sbjct: 329 EGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 388
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREG---GDASEIP 368
DF++KLL+ DP R+T QAL HPW+ G G S+IP
Sbjct: 389 DFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 151/267 (56%), Gaps = 7/267 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + LG G F K G A K I K+ + ++RE +I + L
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L A
Sbjct: 62 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIA 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
CH +G+VHR++KPEN L S + +++K DFGL+ + + + G+ Y++PEVL
Sbjct: 119 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 178
Query: 274 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
K+ S P D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ A
Sbjct: 179 KKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 237
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWV 358
K + +L +P+ R+TA QAL PW+
Sbjct: 238 KSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 168 bits (425), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 151/267 (56%), Gaps = 7/267 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + LG G F K G A K I K+ + ++RE +I + L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L A
Sbjct: 63 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIA 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
CH +G+VHR++KPEN L S + +++K DFGL+ + + + G+ Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 274 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
K+ S P D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ A
Sbjct: 180 KKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWV 358
K + +L +P+ R+TA QAL PW+
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 167 bits (424), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/267 (32%), Positives = 151/267 (56%), Gaps = 7/267 (2%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + LG G F K G A K I K+ + ++RE +I + L
Sbjct: 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKL 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N+V+ +++ +++++ Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L A
Sbjct: 63 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIA 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
CH +G+VHR++KPEN L S + +++K DFGL+ + + + G+ Y++PEVL
Sbjct: 120 YCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVL 179
Query: 274 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
K+ S P D+W+ GVI YILL G PFWD+ + ++ ++ D+ W +++ A
Sbjct: 180 KKDPYSKP-VDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEA 238
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWV 358
K + +L +P+ R+TA QAL PW+
Sbjct: 239 KSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 167 bits (423), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 165/309 (53%), Gaps = 17/309 (5%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L Q + T + + P + D+ K+F ++Y ++G G +A
Sbjct: 59 KKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRAT 118
Query: 121 GDRVAVKKIE-KNKMILPIAVEDVK----REVKILQALAGHENVVKFYNAFEDDNYVYIA 175
G AVK +E + + P +E+V+ RE IL+ +AGH +++ +++E +++++
Sbjct: 119 GHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLV 178
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235
+L GEL D + K +EK+ ++R +L + H + +VHRD+KPEN L
Sbjct: 179 FDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD-- 234
Query: 236 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGV 288
++ ++ +DFG S ++PG+K +++ G+ Y+APE+LK G E D+W+ GV
Sbjct: 235 -DNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGV 293
Query: 289 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 348
I + LL G PFW + + + + ++ + F W S++ KD + +LL DP ARLT
Sbjct: 294 ILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT 353
Query: 349 AAQALSHPW 357
A QAL HP+
Sbjct: 354 AEQALQHPF 362
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/273 (36%), Positives = 154/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG GQF +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 163/305 (53%), Gaps = 12/305 (3%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F Y + + LG G F G A I K+ + D ++RE +I
Sbjct: 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL----SARDHQKLEREARIC 64
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 65 RLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILE 121
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVA 269
CH G+VHR++KPEN L S + +++K DFGL+ ++ ++ + G+ Y++
Sbjct: 122 AVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLS 181
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVT 241
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 388
AKD + K+L +P R+TAA+AL HPW+ + ++ +++F +LK
Sbjct: 242 PEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKG 301
Query: 389 FALRV 393
L V
Sbjct: 302 AILTV 306
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 155/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG G+F +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 152/266 (57%), Gaps = 12/266 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKILQALA 154
Y + + +G G F G A K I K+ + D ++RE +I + L
Sbjct: 6 YQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKL----SARDHQKLEREARICRLLK 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ ++Q+L
Sbjct: 62 -HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLH 118
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVL 273
CH G+VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++PEVL
Sbjct: 119 CHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVL 178
Query: 274 KRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
++++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++ AK
Sbjct: 179 RKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAK 238
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWV 358
+ + ++L +P R+TA +AL HPWV
Sbjct: 239 NLINQMLTINPAKRITAHEALKHPWV 264
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 100/273 (36%), Positives = 154/273 (56%), Gaps = 8/273 (2%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVK 148
++ D Y G+ LG G F +K+ G + A K I+K + ++ ED++REV
Sbjct: 7 ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
IL+ + H NV+ + +E+ V + +EL GGEL D LA+K+S TE++A ++Q+
Sbjct: 67 ILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFD-FLAEKES-LTEEEATEFLKQI 123
Query: 209 LRVAAECHLHGLVHRDMKPEN-FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
L H + H D+KPEN L +K DFGL+ I G +F++I G+ +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEF 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
VAPE++ + G E+D+WSIGVITYILL G PF T+ V +F + + +
Sbjct: 184 VAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSN 243
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
S AKDF+++LLVKDP+ R+T +L HPW++
Sbjct: 244 TSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/276 (34%), Positives = 157/276 (56%), Gaps = 19/276 (6%)
Query: 92 KDFD---RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
KD+D + Y + + +G G F +A G+ VA+K ++KN L + +K E++
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNT--LGSDLPRIKTEIE 60
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L+ L H+++ + Y+ E N +++ +E C GGEL D I+++ R +E++ VV RQ+
Sbjct: 61 ALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQI 117
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF--QDIVGSAY 266
+ A H G HRD+KPEN LF E LK DFGL K K + Q GS
Sbjct: 118 VSAVAYVHSQGYAHRDLKPENLLFD---EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 267 YVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
Y APE+++ KS G E+DVWS+G++ Y+L+CG PF D ++K+++R K D + W
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK--W 232
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S S+ ++++L DP+ R++ L+HPW+ +
Sbjct: 233 --LSPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 164 bits (415), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 102/325 (31%), Positives = 174/325 (53%), Gaps = 20/325 (6%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP--IAVEDVKREVK 148
D F+ Y + +++G G F ++ G + AVK ++ K ++ ED+KRE
Sbjct: 19 DVLFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVR 206
I L H ++V+ + D +Y+ E +G +L I+ + D+ Y+E A+ +R
Sbjct: 79 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------SDFIKPGKKFQD 260
Q+L CH + ++HRD+KPEN L S + + +K DFG+ S + G+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGR---- 193
Query: 261 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 319
VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F+ +++ K
Sbjct: 194 -VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKM 251
Query: 320 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIPIDISVLNNMR 378
+ W IS SAKD V+++L+ DP R+T +AL+HPW++E A +I + +V +R
Sbjct: 252 NPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLR 310
Query: 379 QFVKYSRLKQFALRVTQYFKYTALF 403
+F +LK L K+ + +
Sbjct: 311 KFNARRKLKGAVLAAVSSHKFNSFY 335
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/288 (36%), Positives = 157/288 (54%), Gaps = 11/288 (3%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG + +KA G RV V K P+ VK E+ I+ L H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATG-RVFVAKFINTPY--PLDKYTVKNEISIMNQLH-HP 108
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
++ ++AFED + + +E GGEL DRI A +D + +E + +RQ H
Sbjct: 109 KLINLHDAFEDKYEMVLILEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
H +VH D+KPEN + ++ K+ SS+K DFGL+ + P + + +A + APE++ R+
Sbjct: 168 HSIVHLDIKPENIMCET-KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREP 226
Query: 278 -GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
G +D+W+IGV+ Y+LL G PF + + + V R +F + S+S AKDF+K
Sbjct: 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIK 286
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIP--IDISVLNNMRQFVK 382
LL K+PR RLT AL HPW++ GD S + I S N +RQ +K
Sbjct: 287 NLLQKEPRKRLTVHDALEHPWLK--GDHSNLTSRIPSSRYNKIRQKIK 332
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/299 (30%), Positives = 160/299 (53%), Gaps = 12/299 (4%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F Y + + LG G F K A K I K+ + D ++RE +I
Sbjct: 29 FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKL----SARDHQKLEREARIC 84
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ L H N+V+ +++ ++ + Y+ +L GGEL + I+A++ Y+E DA+ + Q+L
Sbjct: 85 RLLK-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVARE--YYSEADASHCIHQILE 141
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVA 269
H H +VHRD+KPEN L S + +++K DFGL+ ++ ++ + G+ Y++
Sbjct: 142 SVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLS 201
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
PEVL++ G D+W+ GVI YILL G PFWD+ + +++++ DF W +++
Sbjct: 202 PEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVT 261
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLK 387
AK+ + ++L +P R+TA QAL HPWV + + + + +R+F +LK
Sbjct: 262 PEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLK 320
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 12/335 (3%)
Query: 76 QTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI 135
+G++P G D D F+ Y + +++G G F ++ G + AVK ++ K
Sbjct: 8 SSGLVPRGSMAD--DDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFT 65
Query: 136 LP--IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD 193
++ ED+KRE I L H ++V+ + D +Y+ E +G +L I+ + D
Sbjct: 66 SSPGLSTEDLKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRAD 124
Query: 194 SR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-D 250
+ Y+E A+ +RQ+L CH + ++HRD+KP L S + + +K FG++
Sbjct: 125 AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 184
Query: 251 FIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 309
+ G VG+ +++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F
Sbjct: 185 LGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLF 243
Query: 310 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIP 368
+ +++ K + W IS SAKD V+++L+ DP R+T +AL+HPW++E A +I
Sbjct: 244 EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIH 303
Query: 369 IDISVLNNMRQFVKYSRLKQFALRVTQYFKYTALF 403
+ +V +R+F +LK L K+ + +
Sbjct: 304 LPETV-EQLRKFNARRKLKGAVLAAVSSHKFNSFY 337
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 147/264 (55%), Gaps = 13/264 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +G LLG G F Y A G VA+K I+K M V+ V+ EVKI L H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK-HP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
++++ YN FED NYVY+ +E+C GE ++R L + ++E +A + Q++ H
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGE-MNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRK 276
HG++HRD+ N L + ++K DFGL+ +K P +K + G+ Y++PE+ R
Sbjct: 131 HGILHRDLTLSNLLL---TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRS 187
Query: 277 S-GPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
+ G ESDVWS+G + Y LL GR PF D ++ + K VL D+ + SI AKD
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVL---ADYEMPSFLSI--EAKDL 242
Query: 335 VKKLLVKDPRARLTAAQALSHPWV 358
+ +LL ++P RL+ + L HP++
Sbjct: 243 IHQLLRRNPADRLSLSSVLDHPFM 266
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/303 (34%), Positives = 154/303 (50%), Gaps = 37/303 (12%)
Query: 94 FDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
F+ Y + +LLG G + A NG AVK IEK + V REV+ L
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQA---GHSRSRVFREVETLYQ 66
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
G++N+++ FEDD Y+ E +GG +L I +K + E++A+ VVR +
Sbjct: 67 CQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHI--QKQKHFNEREASRVVRDVAAAL 124
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--------VGS 264
H G+ HRD+KPEN L +S ++ S +K DF L +K I GS
Sbjct: 125 DFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGS 184
Query: 265 AYYVAPEVLKRKSGPES------DVWSIGVITYILLCGRRPF---------WDKTE---- 305
A Y+APEV++ + + D+WS+GV+ YI+L G PF WD+ E
Sbjct: 185 AEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRV 244
Query: 306 --DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363
+ +F+ + K +F K W IS+ AKD + KLLV+D + RL+AAQ L HPWV+ G
Sbjct: 245 CQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQ 302
Query: 364 ASE 366
A E
Sbjct: 303 APE 305
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 157 bits (396), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 151/269 (56%), Gaps = 15/269 (5%)
Query: 98 YTIGK--LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
YT+ K +LG G+FG + + A G ++A K I+ M E+VK E+ ++ L
Sbjct: 89 YTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMK---DKEEVKNEISVMNQL-D 144
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAA 213
H N+++ Y+AFE N + + ME +GGEL DRI+ D Y TE D + ++Q+
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRII---DESYNLTELDTILFMKQICEGIR 201
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
H ++H D+KPEN L + ++ +K DFGL+ KP +K + G+ ++APEV+
Sbjct: 202 HMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVV 260
Query: 274 KRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
S P +D+WS+GVI Y+LL G PF + +L + D + + IS A
Sbjct: 261 NYDFVSFP-TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEA 319
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K+F+ KLL+K+ R++A++AL HPW+ +
Sbjct: 320 KEFISKLLIKEKSWRISASEALKHPWLSD 348
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 156 bits (395), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 170/320 (53%), Gaps = 10/320 (3%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP--IAVEDVKREVK 148
D F+ Y + +++G G F ++ G + AVK ++ K ++ ED+KRE
Sbjct: 19 DVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREAS 78
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR--YTEKDAAVVVR 206
I L H ++V+ + D +Y+ E +G +L I+ + D+ Y+E A+ +R
Sbjct: 79 ICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMR 137
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 265
Q+L CH + ++HRD+KP L S + + +K FG++ + G VG+
Sbjct: 138 QILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTP 197
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+++APEV+KR+ G DVW GVI +ILL G PF+ T++ +F+ +++ K + W
Sbjct: 198 HFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQW 256
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD-ASEIPIDISVLNNMRQFVKY 383
IS SAKD V+++L+ DP R+T +AL+HPW++E A +I + +V +R+F
Sbjct: 257 SHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETV-EQLRKFNAR 315
Query: 384 SRLKQFALRVTQYFKYTALF 403
+LK L K+ + +
Sbjct: 316 RKLKGAVLAAVSSHKFNSFY 335
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/289 (32%), Positives = 145/289 (50%), Gaps = 19/289 (6%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
G++P G + F Y + + +G G + KA AVK I+K+K
Sbjct: 13 GLVPRGSHMNL----VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK---- 64
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
D E++IL H N++ + ++D +VY+ EL GGELLD+IL +K ++
Sbjct: 65 ---RDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFS 119
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGK 256
E++A+ V+ + + H G+VHRD+KP N L+ + L+ DFG + ++
Sbjct: 120 EREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAEN 179
Query: 257 KF-QDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKE 311
+A +VAPEVLKR+ E D+WS+G++ Y +L G PF + D I
Sbjct: 180 GLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTR 239
Query: 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ K W ++S +AKD V K+L DP RLTA Q L HPWV +
Sbjct: 240 IGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 141/271 (52%), Gaps = 15/271 (5%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK-------RDPTEEIEILLRY 72
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++ + ++D YVY+ EL +GGELLD+IL +K ++E++A+ V+ + +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVE 130
Query: 214 ECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPE 271
H G+VHRD+KP N L+ + S++ DFG + ++ +A +VAPE
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPE 190
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSI 327
VL+R+ D+WS+GV+ Y +L G PF D T + I + K W S+
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S++AKD V K+L DP RLTAA L HPW+
Sbjct: 251 SDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 154 bits (388), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K +EK+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K ++
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRE 182
Query: 261 IVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313
+ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 139/273 (50%), Gaps = 15/273 (5%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 25 FSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSK-------RDPSEEIEILLRY 77
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++ + ++D +VY+ EL GGELLD+IL +K ++E++A+ V+ + +
Sbjct: 78 GQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQK--FFSEREASFVLHTIGKTVE 135
Query: 214 ECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPE 271
H G+VHRD+KP N L+ + L+ DFG + ++ +A +VAPE
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPE 195
Query: 272 VLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSI 327
VLKR+ E D+WS+G++ Y +L G PF + D I + K W ++
Sbjct: 196 VLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTV 255
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S +AKD V K+L DP RLTA Q L HPWV +
Sbjct: 256 SETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 153 bits (387), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 128/227 (56%), Gaps = 12/227 (5%)
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K +EK+
Sbjct: 55 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 112
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K ++
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRE 169
Query: 261 IVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313
+ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 170 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 229
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 230 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 127/227 (55%), Gaps = 12/227 (5%)
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E +EV IL+ ++GH N+++ + +E + + ++ +L + GEL D + K +EK+
Sbjct: 68 EATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 125
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
++R +L V H +VHRD+KPEN L +D ++K TDFG S + PG+K +
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLRS 182
Query: 261 IVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 313
+ G+ Y+APE+++ G E D+WS GVI Y LL G PFW + + + + ++
Sbjct: 183 VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIM 242
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
F W S++ KD V + LV P+ R TA +AL+HP+ ++
Sbjct: 243 SGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/271 (33%), Positives = 139/271 (51%), Gaps = 15/271 (5%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F Y + + +G G + KA AVK I+K+K D E++IL
Sbjct: 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSK-------RDPTEEIEILLRY 72
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++ + ++D YVY+ EL +GGELLD+IL +K ++E++A+ V+ + +
Sbjct: 73 GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQK--FFSEREASAVLFTITKTVE 130
Query: 214 ECHLHGLVHRDMKPENFLF-KSAKEDSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPE 271
H G+VHRD+KP N L+ + S++ DFG + ++ +A +VAPE
Sbjct: 131 YLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPE 190
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSI 327
VL+R+ D+WS+GV+ Y L G PF D T + I + K W S+
Sbjct: 191 VLERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSV 250
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S++AKD V K L DP RLTAA L HPW+
Sbjct: 251 SDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 152 bits (383), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 20/291 (6%)
Query: 91 DKDFDRRYTIG---KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
D F + Y + K LG G F K + AVK I K + ++E+
Sbjct: 3 DSPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEI 56
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ GH N+VK + F D + ++ MEL GGEL +RI KK ++E +A+ ++R+
Sbjct: 57 TALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRK 114
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAY 266
++ + H G+VHRD+KPEN LF ++ +K DFG + P + + + +
Sbjct: 115 LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH 174
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWD-------KTEDGIFKEVLRNKPD 318
Y APE+L + ES D+WS+GVI Y +L G+ PF + I K++ +
Sbjct: 175 YAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS 234
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
F + W ++S AKD ++ LL DP RL + + W+++G S P+
Sbjct: 235 FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 143/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VA+K I+K ++ P +++ + REV+I++ L H
Sbjct: 14 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKIL-NHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K GS Y APE+ K+
Sbjct: 130 KRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK 186
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 187 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 242
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
K+ LV +P R T Q + W+ G + E+
Sbjct: 243 KRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 274
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 143/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VA+K I+K ++ P +++ + REV+I++ L H
Sbjct: 17 YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLN-PTSLQKLFREVRIMKIL-NHP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K G+ Y APE+ K+
Sbjct: 133 KRIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK 189
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 245
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
K+ LV +P R T Q + W+ G + E+
Sbjct: 246 KRFLVLNPIKRGTLEQIMKDRWINAGHEEDEL 277
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K GS Y APE+ K+
Sbjct: 132 KFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 244
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q + W+ G + E+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K GS Y APE+ K+
Sbjct: 132 KFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 244
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q + W+ G + E+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 143/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAV+ I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K + GS Y APE+ K+
Sbjct: 132 KFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK 188
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 244
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q + W+ G + E+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 142/285 (49%), Gaps = 18/285 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G LG G FG V + G +VAVK + + K+ V ++RE++ L+ L H
Sbjct: 18 YILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLK-LFRHP 76
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y + +++ ME GGEL D I K+ R EK++ + +Q+L CH
Sbjct: 77 HIIKLYQVISTPSDIFMVMEYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHR 134
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L + + K DFGLS+ + G+ + GS Y APEV+ +
Sbjct: 135 HMVVHRDLKPENVLLDAHM---NAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRL 191
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN---KPDFRRKPWPSISNSAK 332
+GPE D+WS GVI Y LLCG PF D +FK++ P + ++ S
Sbjct: 192 YAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQY-------LNPSVI 244
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNM 377
+K +L DP R T H W ++ P D S + M
Sbjct: 245 SLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTM 289
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 140/281 (49%), Gaps = 26/281 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G + G + A+K + + ++EV +G ++V
Sbjct: 16 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVC 67
Query: 162 FYNAFEDDNY----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ +E+ ++ + I ME EGGEL RI + D +TE++AA ++R + H
Sbjct: 68 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 127
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YYVAPEVL
Sbjct: 128 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVL---- 182
Query: 278 GPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKPWPSIS 328
GPE D+WS+GVI YILLCG PF+ T G+ + + + F W +S
Sbjct: 183 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 242
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 243 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 283
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 140/281 (49%), Gaps = 26/281 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G + G + A+K + + ++EV +G ++V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLLYDSP--------KARQEVDHHWQASGGPHIVC 86
Query: 162 FYNAFEDDNY----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ +E+ ++ + I ME EGGEL RI + D +TE++AA ++R + H
Sbjct: 87 ILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS 146
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
H + HRD+KPEN L+ S ++D+ LK TDFG + Q + YYVAPEVL
Sbjct: 147 HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT-QNALQTPCYTPYYVAPEVL---- 201
Query: 278 GPE-----SDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKPWPSIS 328
GPE D+WS+GVI YILLCG PF+ T G+ + + + F W +S
Sbjct: 202 GPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 261
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
AK ++ LL DP RLT Q ++HPW+ + + P+
Sbjct: 262 EDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQTPL 302
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 149 bits (375), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAV+ I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K GS Y APE+ K+
Sbjct: 132 KFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 188
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 244
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q + W+ G + E+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 148 bits (374), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 148/320 (46%), Gaps = 52/320 (16%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKM--ILPIAVEDVKREVKIL 150
+ ++Y + +G G +G VA + A+K + KNK+ I P VE +K EV+++
Sbjct: 23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+ L H N+ + Y +ED+ Y+ + MELC GG LLD++ D T K A VV+ +
Sbjct: 83 KKLH-HPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDS-TGKCAMDVVKTQIC 140
Query: 211 VAAEC---------------------------------------HLHGLVHRDMKPENFL 231
EC H G+ HRD+KPENFL
Sbjct: 141 PCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFL 200
Query: 232 FKSAKEDSSLKATDFGLS-DFIKPGKK----FQDIVGSAYYVAPEVLKRKS---GPESDV 283
F S + +K DFGLS +F K G+ Y+VAPEVL + GP+ D
Sbjct: 201 F-STNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259
Query: 284 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 343
WS GV+ ++LL G PF + +VL K F + +S A+D + LL ++
Sbjct: 260 WSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNV 319
Query: 344 RARLTAAQALSHPWVREGGD 363
R A +AL HPW+ + D
Sbjct: 320 DERFDAMRALQHPWISQFSD 339
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 142/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K G+ Y APE+ K+
Sbjct: 132 KFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 244
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q + W+ G + E+
Sbjct: 245 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 276
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 148 bits (373), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 140/265 (52%), Gaps = 19/265 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I + LG G FG +AT +VA+K I + + V+RE+ L+ L H
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y+ + + +E GGEL D I+ KK R TE + +Q++ CH
Sbjct: 70 HIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHR 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L ++ ++K DFGLS+ + G + GS Y APEV+ K
Sbjct: 127 HKIVHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKL 183
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE DVWS G++ Y++L GR PF D+ +FK+V + PDF +S A+
Sbjct: 184 YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQ 236
Query: 333 DFVKKLLVKDPRARLTAAQALSHPW 357
+++++V DP R+T + PW
Sbjct: 237 SLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 91/268 (33%), Positives = 136/268 (50%), Gaps = 18/268 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G LG G FG + + G +VAVK + + K+ V +KRE++ L+ L H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y ++ ME GGEL D I K R E +A + +Q+L CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L + + K DFGLS+ + G+ +D GS Y APEV+ +
Sbjct: 130 HMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRL 186
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE D+WS GVI Y LLCG PF D+ +FK++ + P++ ++ S
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY-------LNRSVA 239
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ +L DP R T H W ++
Sbjct: 240 TLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/272 (34%), Positives = 141/272 (51%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I++ L H
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIMKVL-NHP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A EK+A RQ++ CH
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K GS Y APE+ K+
Sbjct: 125 KFIVHRDLKAENLLLDA---DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK 181
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 182 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 237
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q + W+ G + E+
Sbjct: 238 KKFLILNPSKRGTLEQIMKDRWMNVGHEDDEL 269
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/268 (33%), Positives = 135/268 (50%), Gaps = 18/268 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G LG G FG + + G +VAVK + + K+ V +KRE++ L+ L H
Sbjct: 13 YVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLK-LFRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y ++ ME GGEL D I K R E +A + +Q+L CH
Sbjct: 72 HIIKLYQVISTPTDFFMVMEYVSGGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCHR 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L + + K DFGLS+ + G+ + GS Y APEV+ +
Sbjct: 130 HMVVHRDLKPENVLLDA---HMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL 186
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE D+WS GVI Y LLCG PF D+ +FK++ + P++ ++ S
Sbjct: 187 YAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEY-------LNRSVA 239
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ +L DP R T H W ++
Sbjct: 240 TLLMHMLQVDPLKRATIKDIREHEWFKQ 267
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 104/296 (35%), Positives = 145/296 (48%), Gaps = 36/296 (12%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVKILQALAGHENVVK 161
+LG G + AVK IEK P + V REV++L GH NV++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
FE+++ Y+ E GG +L I K + E +A+VVV+ + H G+
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEVL 273
HRD+KPEN L + + S +K DFGL IK I GSA Y+APEV+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 274 KRKSGPES------DVWSIGVITYILLCGRRPF---------WDKTE------DGIFKEV 312
+ S S D+WS+GVI YILL G PF WD+ E + +F+ +
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
K +F K W IS +AKD + KLLV+D + RL+AAQ L HPWV+ + +P
Sbjct: 254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 19/279 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 6 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 64
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y+ + + + + +E G EL D I+ + + +E++A +Q++ CH
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 121
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L E ++K DFGLS+ + G + GS Y APEV+ K
Sbjct: 122 HKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 178
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE DVWS GVI Y++LC R PF D++ +FK + + P F +S A
Sbjct: 179 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAA 231
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 371
+K++L+ +P R++ + + W + +P D+
Sbjct: 232 GLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 270
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 19/267 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 16 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y+ + + + + +E G EL D I+ + + +E++A +Q++ CH
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L E ++K DFGLS+ + G + GS Y APEV+ K
Sbjct: 132 HKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 188
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE DVWS GVI Y++LC R PF D++ +FK + + P F +S A
Sbjct: 189 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAA 241
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
+K++L+ +P R++ + + W +
Sbjct: 242 GLIKRMLIVNPLNRISIHEIMQDDWFK 268
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/267 (32%), Positives = 140/267 (52%), Gaps = 19/267 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y+ + + + + +E G EL D I+ + + +E++A +Q++ CH
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 130
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L E ++K DFGLS+ + G + GS Y APEV+ K
Sbjct: 131 HKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 187
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE DVWS GVI Y++LC R PF D++ +FK + + P F +S A
Sbjct: 188 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAA 240
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
+K++L+ +P R++ + + W +
Sbjct: 241 GLIKRMLIVNPLNRISIHEIMQDDWFK 267
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 142 bits (359), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 144/279 (51%), Gaps = 19/279 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I K LG G FG +A G +VA+K I K + ++RE+ L+ L H
Sbjct: 10 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++K Y+ + + + + +E G EL D I+ + + +E++A +Q++ CH
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHR 125
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK- 276
H +VHRD+KPEN L E ++K DFGLS+ + G + GS Y APEV+ K
Sbjct: 126 HKIVHRDLKPENLLLD---EHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKL 182
Query: 277 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAK 332
+GPE DVWS GVI Y++LC R PF D++ +FK + + P F +S A
Sbjct: 183 YAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF-------LSPGAA 235
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 371
+K++L+ +P R++ + + W + +P D+
Sbjct: 236 GLIKRMLIVNPLNRISIHEIMQDDWFKVDLPEYLLPPDL 274
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 142 bits (357), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/296 (34%), Positives = 144/296 (48%), Gaps = 36/296 (12%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVKILQALAGHENVVK 161
+LG G + AVK IEK P + V REV++L GH NV++
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQ----PGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
FE+++ Y+ E GG +L I K + E +A+VVV+ + H G+
Sbjct: 76 LIEFFEEEDRFYLVFEKMRGGSILSHI--HKRRHFNELEASVVVQDVASALDFLHNKGIA 133
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEVL 273
HRD+KPEN L + + S +K DF L IK I GSA Y+APEV+
Sbjct: 134 HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 274 KRKSGPES------DVWSIGVITYILLCGRRPF---------WDKTE------DGIFKEV 312
+ S S D+WS+GVI YILL G PF WD+ E + +F+ +
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESI 253
Query: 313 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
K +F K W IS +AKD + KLLV+D + RL+AAQ L HPWV+ + +P
Sbjct: 254 QEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 140 bits (354), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 144/272 (52%), Gaps = 12/272 (4%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKI 149
K+ +Y I + LG G+FG + + ++ K K++ +L VK+E+ I
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVL------VKKEISI 54
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
L +A H N++ + +FE + + E G ++ +RI E++ V Q+
Sbjct: 55 LN-IARHRNILHLHESFESMEELVMIFEFISGLDIFERI-NTSAFELNEREIVSYVHQVC 112
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H H + H D++PEN ++++ + S++K +FG + +KPG F+ + + Y A
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYA 171
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
PEV + +D+WS+G + Y+LL G PF +T I + ++ + F + + IS
Sbjct: 172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEIS 231
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
A DFV +LLVK+ ++R+TA++AL HPW+++
Sbjct: 232 IEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 143/272 (52%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ P +++ + REV+I++ L H
Sbjct: 17 YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLN-PTSLQKLFREVRIMKIL-NHP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ ME GGE+ D ++A R EK+A RQ++ CH
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L D ++K DFG S+ G K GS Y APE+ K+
Sbjct: 133 KYIVHRDLKAENLLLDG---DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ +S ++ +
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLL 245
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KKLLV +P R + Q + W+ G + E+
Sbjct: 246 KKLLVLNPIKRGSLEQIMKDRWMNVGHEEEEL 277
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 140 bits (353), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/272 (33%), Positives = 137/272 (50%), Gaps = 13/272 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K +G G F +A G VAVK I+K ++ +++ + REV+I + L H
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLN-SSSLQKLFREVRIXKVL-NHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+VK + E + +Y+ E GGE+ D ++A R EK+A RQ++ CH
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAH--GRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KR 275
+VHRD+K EN L + D ++K DFG S+ G K G+ Y APE+ K+
Sbjct: 132 KFIVHRDLKAENLLLDA---DXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
GPE DVWS+GVI Y L+ G PF + + + VLR K R P+ S ++ +
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGK---YRIPF-YXSTDCENLL 244
Query: 336 KKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
KK L+ +P R T Q W G + E+
Sbjct: 245 KKFLILNPSKRGTLEQIXKDRWXNVGHEDDEL 276
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 138/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 72
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + + YYVAPEVL
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL--- 189
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 190 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 248
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 249 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 28 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 79
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 80 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 139
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 140 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 196
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 197 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 255
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 256 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 300
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 27 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 78
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 79 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 138
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 139 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 195
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 196 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 254
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 255 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 299
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 118
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 119 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 178
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 235
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 236 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 294
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 295 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 339
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 191
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 192 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 250
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 251 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 22 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 73
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 74 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 133
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 134 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 190
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 191 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 249
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 250 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 294
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 73 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 124
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 125 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 184
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 185 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 241
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 242 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 300
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 301 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 345
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 29 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 80
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 81 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 140
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 141 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 197
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 198 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 256
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 257 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 301
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 191
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 192 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 250
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 251 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 295
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 137/285 (48%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 21 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 72
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 73 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 133 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 189
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +
Sbjct: 190 -GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV 248
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 249 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 293
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 14/269 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 92
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 93 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 149
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 150 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 206
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P R K +S S K F+ +LLV+
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVR 265
Query: 342 DPRARLTAAQALSHPWV-REGGDASEIPI 369
DP R TAA+ L HP++ + G AS +P+
Sbjct: 266 DPAQRATAAELLKHPFLAKAGPPASIVPL 294
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 14/269 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 83
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 84 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 140
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 141 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 197
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P R K +S S K F+ +LLV+
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVR 256
Query: 342 DPRARLTAAQALSHPWV-REGGDASEIPI 369
DP R TAA+ L HP++ + G AS +P+
Sbjct: 257 DPAQRATAAELLKHPFLAKAGPPASIVPL 285
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 137/284 (48%), Gaps = 25/284 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G G +K ++ A+K ++ +REV++ + ++V+
Sbjct: 38 QVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIVR 89
Query: 162 FYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 90 IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS 149
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 150 INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL---- 205
Query: 278 GPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSIS 328
GPE D+WS+GVI YILLCG PF+ G+ + + +F W +S
Sbjct: 206 GPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVS 265
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
K ++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 266 EEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 309
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 14/269 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 87
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 88 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 144
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 145 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 201
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P R K +S S K F+ +LLV+
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVR 260
Query: 342 DPRARLTAAQALSHPWV-REGGDASEIPI 369
DP R TAA+ L HP++ + G AS +P+
Sbjct: 261 DPAQRATAAELLKHPFLAKAGPPASIVPL 289
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 14/269 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 94
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 95 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 151
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 152 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 208
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P R K +S S K F+ +LLV+
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVR 267
Query: 342 DPRARLTAAQALSHPWV-REGGDASEIPI 369
DP R TAA+ L HP++ + G AS +P+
Sbjct: 268 DPAQRATAAELLKHPFLAKAGPPASIVPL 296
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 14/269 (5%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 137
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 138 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 194
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 195 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 251
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P R K +S S K F+ +LLV+
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVR 310
Query: 342 DPRARLTAAQALSHPWV-REGGDASEIPI 369
DP R TAA+ L HP++ + G AS +P+
Sbjct: 311 DPAQRATAAELLKHPFLAKAGPPASIVPL 339
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 146/266 (54%), Gaps = 13/266 (4%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +AT +++G VAVKK++ K E + EV I++ HENVV+ Y
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQ-HENVVEMY 214
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
N++ + +++ ME EGG L D + +R E+ A V +L+ + H G++HR
Sbjct: 215 NSYLVGDELWVVMEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHR 271
Query: 224 DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG + K + + +VG+ Y++APE++ R GPE
Sbjct: 272 DIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEV 328
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++++ K + N P R K +S S K F+ +LLV+
Sbjct: 329 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVR 387
Query: 342 DPRARLTAAQALSHPWVREGGDASEI 367
DP R TAA+ L HP++ + G + I
Sbjct: 388 DPAQRATAAELLKHPFLAKAGPPASI 413
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 137/275 (49%), Gaps = 3/275 (1%)
Query: 88 FGYDKDFDRRYTI-GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
F ++F+ Y + K LG G+F K+ G A K ++K + E + E
Sbjct: 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE-ILHE 78
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ +L+ V+ + +E+ + + + +E GGE+ L + +E D +++
Sbjct: 79 IAVLELAKSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIK 138
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
Q+L H + +VH D+KP+N L S +K DFG+S I + ++I+G+
Sbjct: 139 QILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPE 198
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
Y+APE+L +D+W+IG+I Y+LL PF + + + + D+ + +
Sbjct: 199 YLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFS 258
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S+S A DF++ LLVK+P R TA LSH W+++
Sbjct: 259 SVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQQ 293
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I A+
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICI-NAM 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 137 bits (344), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 154/302 (50%), Gaps = 34/302 (11%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 15 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 58
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
+A+K + K ++ ++REV+I Q+ H N+++ Y F D VY+ +E
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAP 117
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
G + + +K S++ E+ A + ++ + CH ++HRD+KPEN L SA E
Sbjct: 118 LGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--- 172
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 299
LK DFG S P + D+ G+ Y+ PE+++ R + D+WS+GV+ Y L G+ P
Sbjct: 173 LKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 300 FWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
F T +K + R + PDF ++ A+D + +LL +P R + L HP
Sbjct: 232 FEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHP 284
Query: 357 WV 358
W+
Sbjct: 285 WI 286
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E GE+ + +K S++ E+ A + ++ + CH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYCHS 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 240
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + D+ G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + D+ G+ Y+ PE+++ R
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 187
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 240
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 127
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + D+ G+ Y+ PE+++ R
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 183
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 236
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + D+ G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTDLCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G + + + DFD IG+ LG G+FG Y+A ++ + +A+K + K ++
Sbjct: 2 PLGSKRQWTLE-DFD----IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE 56
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
++REV+I Q+ H N+++ Y F D VY+ +E G + + +K SR+ E+
Sbjct: 57 HQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQR 113
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
A + ++ + CH ++HRD+KPEN L S E LK DFG S P +
Sbjct: 114 TATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWS-VHAPSSRRTT 169
Query: 261 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--- 316
+ G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T ++ + R +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 230 PDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E GE+ + +K S++ E+ A + ++ + CH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPRGEVYKEL--QKLSKFDEQRTATYITELANALSYCHS 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLXGTLDYLPPEMIEGRM 187
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 240
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 146/283 (51%), Gaps = 23/283 (8%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G + + + DFD IG+ LG G+FG Y+A ++ + +A+K + K ++
Sbjct: 2 PLGSKRQWTLE-DFD----IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVE 56
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
++REV+I Q+ H N+++ Y F D VY+ +E G + + +K SR+ E+
Sbjct: 57 HQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSRFDEQR 113
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
A + ++ + CH ++HRD+KPEN L S E LK DFG S P +
Sbjct: 114 TATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWS-VHAPSSRRDT 169
Query: 261 IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--- 316
+ G+ Y+ PE+++ R + D+WS+GV+ Y L G PF T ++ + R +
Sbjct: 170 LCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF 229
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
PDF ++ A+D + +LL + RLT A+ L HPW++
Sbjct: 230 PDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 60
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 61 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 117
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 118 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 174
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 175 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 228
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 229 WKKIDSAPLALLHKILVENPSARIT 253
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/265 (31%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + D+ G+ Y+ PE+++ R
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRDDLCGTLDYLPPEMIEGRM 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 238
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 135 bits (340), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEIXINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 130/254 (51%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F T +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 261
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 262 LVEKLLVLDATKRL 275
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 135 bits (339), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 62
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 63 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 119
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 120 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 176
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 177 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 230
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 231 WKKIDSAPLALLHKILVENPSARIT 255
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 34/302 (11%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 6 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 49
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
+A+K + K ++ ++REV+I Q+ H N+++ Y F D VY+ +E
Sbjct: 50 KFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAP 108
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
G + + +K S++ E+ A + ++ + CH ++HRD+KPEN L SA E
Sbjct: 109 LGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--- 163
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 299
LK DFG S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ P
Sbjct: 164 LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 222
Query: 300 FWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
F T +K + R + PDF ++ A+D + +LL +P R + L HP
Sbjct: 223 FEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHP 275
Query: 357 WV 358
W+
Sbjct: 276 WI 277
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 153/302 (50%), Gaps = 34/302 (11%)
Query: 61 QQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKAN 120
++L +KQ + + +RQ + +DF+ IG+ LG G+FG Y+A +K +
Sbjct: 15 EELASKQKNEESKKRQWAL------------EDFE----IGRPLGKGKFGNVYLAREKQS 58
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCE 180
+A+K + K ++ ++REV+I Q+ H N+++ Y F D VY+ +E
Sbjct: 59 KFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHPNILRLYGYFHDATRVYLILEYAP 117
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
G + + +K S++ E+ A + ++ + CH ++HRD+KPEN L SA E
Sbjct: 118 LGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE--- 172
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 299
LK DFG S P + + G+ Y+ PE+++ R + D+WS+GV+ Y L G+ P
Sbjct: 173 LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 231
Query: 300 FWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
F T +K + R + PDF ++ A+D + +LL +P R + L HP
Sbjct: 232 FEANTYQETYKRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHP 284
Query: 357 WV 358
W+
Sbjct: 285 WI 286
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 136/265 (51%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G +G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDS-----XQEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 134 bits (337), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 139/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + ++ G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTELCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 89
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 148 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 260
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 261 LVEKLLVLDATKRL 274
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 238
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 187
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 240
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 241 LISRLLKHNPSQRPMLREVLEHPWI 265
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 31 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 89
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 90 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 147
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 148 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 260
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 261 LVEKLLVLDATKRL 274
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 16 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 74
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 75 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 132
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 133 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 245
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 246 LVEKLLVLDATKRL 259
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 135/265 (50%), Gaps = 24/265 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL 153
F + + + LG G G +A ++ + VAVK ++ + + E++K+E+ I + L
Sbjct: 4 FVEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAV--DCPENIKKEICINKML 61
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
HENVVKFY + N Y+ +E C GGEL DRI + D E DA Q++
Sbjct: 62 -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVV 118
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAP 270
H G+ HRD+KPEN L E +LK +DFGL+ + + + G+ YVAP
Sbjct: 119 YLHGIGITHRDIKPENLLL---DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAP 175
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----P 323
E+LKR+ DVWS G++ +L G P WD+ D + D++ K P
Sbjct: 176 ELLKRREFHAEPVDVWSCGIVLTAMLAGELP-WDQPSDSC-----QEYSDWKEKKTYLNP 229
Query: 324 WPSISNSAKDFVKKLLVKDPRARLT 348
W I ++ + K+LV++P AR+T
Sbjct: 230 WKKIDSAPLALLHKILVENPSARIT 254
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 93
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 152 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 264
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 265 LVEKLLVLDATKRL 278
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 70
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 128
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM 184
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 237
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 9 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 67
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 125
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 126 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 181
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 182 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 234
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 235 LISRLLKHNPSQRPMLREVLEHPWI 259
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 275 RKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS +S D+W++G I Y L+ G PF E IF ++++ + DF K +P A+D
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARD 263
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 264 LVEKLLVLDATKRL 277
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 261
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 262 LVEKLLVLDATKRL 275
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 10 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 69 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 127 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 239
Query: 334 FVKKLLVKDPRARLTAAQ 351
V+KLLV D RL +
Sbjct: 240 LVEKLLVLDATKRLGCEE 257
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 9 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 67
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 68 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 125
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 126 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 238
Query: 334 FVKKLLVKDPRARLTAAQ 351
V+KLLV D RL +
Sbjct: 239 LVEKLLVLDATKRLGCEE 256
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 127
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRDTLCGTLDYLPPEMIEGRM 183
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 236
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 238
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 127 KKVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 263
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 264 LVEKLLVLDATKRL 277
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 11 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 70 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 127
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 128 KRVIHRDIKPENLLLGSAGE---LKIADFGWSCH-APSSRRTTLSGTLDYLPPEMIEGRM 183
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 184 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 236
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 237 LISRLLKHNPSQRPMLREVLEHPWI 261
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 238
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 261
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 262 LVEKLLVLDATKRL 275
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 15 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 74 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 131
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE ++ R
Sbjct: 132 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEXIEGRX 187
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 188 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 240
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 241 LISRLLKHNPSQRPXLREVLEHPWI 265
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF ++++ + DF K +P A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARD 263
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 264 LVEKLLVLDATKRL 277
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 32 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 90
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 91 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 148
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 149 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 261
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 262 LVEKLLVLDATKRL 275
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 14/258 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 11 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 70 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 127
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 128 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 240
Query: 334 FVKKLLVKDPRARLTAAQ 351
V+KLLV D RL +
Sbjct: 241 LVEKLLVLDATKRLGCEE 258
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 263
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 264 LVEKLLVLDATKRL 277
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 12 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 70
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 71 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 128
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 129 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 241
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 242 LVEKLLVLDATKRL 255
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 93
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 94 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 151
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 152 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 264
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 265 LVEKLLVLDATKRL 278
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 97
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 98 FFVKLYFCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 155
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 156 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 268
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 269 LVEKLLVLDATKRL 282
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTXLCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 14 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 72
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 130
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 131 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 186
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 187 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 239
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 240 LISRLLKHNPSQRPMLREVLEHPWI 264
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 263
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 264 LVEKLLVLDATKRL 277
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 238
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRXXLCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 132 bits (333), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 10 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 126
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 127 KRVIHRDIKPENLLLGSAGE---LKIADFGWS-VHAPSSRRAALCGTLDYLPPEMIEGRM 182
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 183 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 235
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 236 LISRLLKHNPSQRPMLREVLEHPWI 260
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 137/265 (51%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K +A+K + K ++ ++REV+I Q+ H
Sbjct: 7 FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 123
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK DFG S P + + G+ Y+ PE+++ R
Sbjct: 124 KRVIHRDIKPENLLLGSAGE---LKIADFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRM 179
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 180 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 232
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 233 LISRLLKHNPSQRPMLREVLEHPWI 257
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-H 73
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q++ + CH
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCH 131
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L + LK DFG S + + VG+ Y+APEVL +K
Sbjct: 132 AMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 190
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAK 332
G +DVWS GV Y++L G PF D E F++ + + + IS +
Sbjct: 191 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 250
Query: 333 DFVKKLLVKDPRARLTAAQALSHPW 357
+ ++ V DP R++ + +H W
Sbjct: 251 HLISRIFVADPAKRISIPEIRNHEW 275
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 16/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DFD IG+ LG G+FG Y+A +K N +A+K + K+++ ++RE++I Q+
Sbjct: 16 DFD----IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QS 70
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
H N+++ YN F D +Y+ +E GEL + +K R+ E+ +A + ++
Sbjct: 71 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADAL 128
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
CH ++HRD+KPEN L E LK DFG S P + + + G+ Y+ PE+
Sbjct: 129 HYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 184
Query: 273 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
++ K+ E D+W GV+ Y L G PF + + ++ F P +S+ +
Sbjct: 185 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 240
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVR 359
KD + KLL P RL + HPWV+
Sbjct: 241 KDLISKLLRYHPPQRLPLKGVMEHPWVK 268
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 12 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 70
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 71 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 128
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK +FG S P + + G+ Y+ PE+++ R
Sbjct: 129 KRVIHRDIKPENLLLGSAGE---LKIANFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRM 184
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 185 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 237
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 238 LISRLLKHNPSQRPMLREVLEHPWI 262
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 132 bits (331), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 137/268 (51%), Gaps = 16/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DFD IG+ LG G+FG Y+A +K N +A+K + K+++ ++RE++I Q+
Sbjct: 15 DFD----IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QS 69
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
H N+++ YN F D +Y+ +E GEL + +K R+ E+ +A + ++
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADAL 127
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
CH ++HRD+KPEN L E LK DFG S P + + + G+ Y+ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 183
Query: 273 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
++ K+ E D+W GV+ Y L G PF + + ++ F P +S+ +
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 239
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVR 359
KD + KLL P RL + HPWV+
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 131 bits (330), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 138/265 (52%), Gaps = 18/265 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + +A+K + K ++ ++REV+I Q+ H
Sbjct: 13 FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI-QSHLRHP 71
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ Y F D VY+ +E G + + +K S++ E+ A + ++ + CH
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHS 129
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN L SA E LK +FG S P + + G+ Y+ PE+++ R
Sbjct: 130 KRVIHRDIKPENLLLGSAGE---LKIANFGWSVH-APSSRRTTLCGTLDYLPPEMIEGRM 185
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKD 333
+ D+WS+GV+ Y L G+ PF T +K + R + PDF ++ A+D
Sbjct: 186 HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDF-------VTEGARD 238
Query: 334 FVKKLLVKDPRARLTAAQALSHPWV 358
+ +LL +P R + L HPW+
Sbjct: 239 LISRLLKHNPSQRPMLREVLEHPWI 263
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 131 bits (329), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/263 (31%), Positives = 137/263 (52%), Gaps = 12/263 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ IG+ LG G+FG Y+A +K + VA+K + K+++ ++RE++I QA H
Sbjct: 25 FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEI-QAHLHHP 83
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
N+++ YN F D +Y+ +E GEL + +K + E+ A ++ ++ CH
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKEL--QKSCTFDEQRTATIMEELADALMYCHG 141
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 276
++HRD+KPEN LK DFG S P + + + G+ Y+ PE+++ R
Sbjct: 142 KKVIHRDIKPEN---LLLGLKGELKIADFGWSVH-APSLRRKTMCGTLDYLPPEMIEGRM 197
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+ D+W IGV+ Y LL G PF + + ++ +++ F S+ A+D +
Sbjct: 198 HNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPA----SVPTGAQDLIS 253
Query: 337 KLLVKDPRARLTAAQALSHPWVR 359
KLL +P RL AQ +HPWVR
Sbjct: 254 KLLRHNPSERLPLAQVSAHPWVR 276
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 25/285 (8%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 67 SQVLGLGINGKVLQIFNKRTQEKFALKXLQD--------CPKARREVELHWRASQCPHIV 118
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I E +GGEL RI + D +TE++A+ + + + H
Sbjct: 119 RIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLH 178
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG + + YYVAPEVL
Sbjct: 179 SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL--- 235
Query: 277 SGPE-----SDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSI 327
GPE D WS+GVI YILLCG PF+ G + + +F W +
Sbjct: 236 -GPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEV 294
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
S K ++ LL +P R T + +HPW+ + + P+ S
Sbjct: 295 SEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQSTKVPQTPLHTS 339
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 131 bits (329), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 86/265 (32%), Positives = 133/265 (50%), Gaps = 12/265 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q++ + CH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNA--GRFSEDEARFFFQQLISGVSYCH 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L + LK FG S + +D VG+ Y+APEVL +K
Sbjct: 133 AMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKK 191
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAK 332
G +DVWS GV Y++L G PF D E F++ + + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 333 DFVKKLLVKDPRARLTAAQALSHPW 357
+ ++ V DP R++ + +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 12/265 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I +VKRE+ ++L H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----AANVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q++ + CH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCH 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L + LK DFG S + + VG+ Y+APEVL +K
Sbjct: 133 AMQVCHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAK 332
G +DVWS GV Y++L G PF D E F++ + + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 333 DFVKKLLVKDPRARLTAAQALSHPW 357
+ ++ V DP R++ + +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 129/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + G LL I +K + E +++ H
Sbjct: 93 FFVKLYFTFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 150
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 151 KGIIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 275 RKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS +S D+W++G I Y L+ G PF E IF+++++ + DF K +P A+D
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARD 263
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 264 LVEKLLVLDATKRL 277
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/254 (34%), Positives = 128/254 (50%), Gaps = 14/254 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ GK+LG G F +A + A A+K +EK +I V V RE ++ L H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL-DHP 95
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK Y F+DD +Y + + GELL I +K + E +++ H
Sbjct: 96 FFVKLYFTFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHG 153
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 274
G++HRD+KPEN L ED ++ TDFG + + P K VG+A YV+PE+L
Sbjct: 154 KGIIHRDLKPENILL---NEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 275 RKSG-PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 333
KS SD+W++G I Y L+ G PF E IF+++++ + DF +P A+D
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARD 266
Query: 334 FVKKLLVKDPRARL 347
V+KLLV D RL
Sbjct: 267 LVEKLLVLDATKRL 280
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 163/323 (50%), Gaps = 29/323 (8%)
Query: 60 YQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKA 119
+Q + H++ + Q V P R Y +F + +G G G +AT+K
Sbjct: 19 FQSMSRVSHEQFRAALQLVVSPGDPRE---YLANFIK-------IGEGSTGIVCIATEKH 68
Query: 120 NGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELC 179
G +VAVKK++ K E + EV I++ H+NVV Y+++ + +++ ME
Sbjct: 69 TGKQVAVKKMDLRKQQ---RRELLFNEVVIMRDYH-HDNVVDMYSSYLVGDELWVVMEFL 124
Query: 180 EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239
EGG L D + +R E+ A V +LR + H G++HRD+K ++ L S D
Sbjct: 125 EGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DG 178
Query: 240 SLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 297
+K +DFG + K K + +VG+ Y++APEV+ R G E D+WS+G++ ++ G
Sbjct: 179 RIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 238
Query: 298 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P++++ + + + P R K +S+ + F+ +LV++P R TA + L HP+
Sbjct: 239 PPYFNEPPLQAMRRIRDSLPP-RVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPF 297
Query: 358 VREGGDASEIPIDISVLNNMRQF 380
++ G S ++ MRQ+
Sbjct: 298 LKLAGPPS------CIVPLMRQY 314
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 146/290 (50%), Gaps = 12/290 (4%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P + D D +RY G+ LG G F Y TD + A K + K+ ++ P
Sbjct: 11 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 70
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E + E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +
Sbjct: 71 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPE 127
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 128 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 184
Query: 260 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
D+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 185 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 244
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 245 VPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 290
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 146/290 (50%), Gaps = 12/290 (4%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P + D D +RY G+ LG G F Y TD + A K + K+ ++ P
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E + E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +
Sbjct: 87 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPE 143
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 200
Query: 260 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
D+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 201 DLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 261 VPRH----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 132/265 (49%), Gaps = 12/265 (4%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKI----DENVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q++ + CH
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCH 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L + LK FG S + + VG+ Y+APEVL +K
Sbjct: 133 AMQVCHRDLKLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKK 191
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAK 332
G +DVWS GV Y++L G PF D E F++ + + + IS +
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECR 251
Query: 333 DFVKKLLVKDPRARLTAAQALSHPW 357
+ ++ V DP R++ + +H W
Sbjct: 252 HLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 128 bits (322), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 16/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
DFD I + LG G+FG Y+A +K N +A+K + K+++ ++RE++I Q+
Sbjct: 15 DFD----IVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEI-QS 69
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
H N+++ YN F D +Y+ +E GEL + +K R+ E+ +A + ++
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKEL--QKHGRFDEQRSATFMEELADAL 127
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
CH ++HRD+KPEN L E LK DFG S P + + + G+ Y+ PE+
Sbjct: 128 HYCHERKVIHRDIKPENLLMGYKGE---LKIADFGWS-VHAPSLRRRXMCGTLDYLPPEM 183
Query: 273 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
++ K+ E D+W GV+ Y L G PF + + ++ F P +S+ +
Sbjct: 184 IEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSDGS 239
Query: 332 KDFVKKLLVKDPRARLTAAQALSHPWVR 359
KD + KLL P RL + HPWV+
Sbjct: 240 KDLISKLLRYHPPQRLPLKGVMEHPWVK 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/270 (32%), Positives = 132/270 (48%), Gaps = 22/270 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY K +G G FG + DK + VAVK IE+ I E+V+RE+ ++L H
Sbjct: 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLR-H 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q+L + CH
Sbjct: 76 PNIVRFKEVILTPTHLAIIMEYASGGELYERIC--NAGRFSEDEARFFFQQLLSGVSYCH 133
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L + LK DFG S + + VG+ Y+APEVL R+
Sbjct: 134 SMQICHRDLKLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQ 192
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------NKPDFRRKPWPSI 327
G +DVWS GV Y++L G PF D E +++ ++ + PD R I
Sbjct: 193 EYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-----I 247
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
S + ++ V DP R++ + +H W
Sbjct: 248 SPECCHLISRIFVADPATRISIPEIKTHSW 277
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 82
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++ H + ++H
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-E 280
RD+K N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E
Sbjct: 141 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLL 339
DVWSIG I Y LL G+ PF E KE LR K + P I+ A ++K+L
Sbjct: 198 VDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKML 252
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPI 369
DP AR T + L+ + G + +PI
Sbjct: 253 QTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 82
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++ H + ++H
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-E 280
RD+K N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E
Sbjct: 141 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 197
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLL 339
DVWSIG I Y LL G+ PF E KE LR K + P I+ A ++K+L
Sbjct: 198 VDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKML 252
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPI 369
DP AR T + L+ + G + +PI
Sbjct: 253 QTDPTARPTINELLNDEFFTSGYIPARLPI 282
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 86
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++ H + ++H
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-E 280
RD+K N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E
Sbjct: 145 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFE 201
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLL 339
DVWSIG I Y LL G+ PF E KE LR K + P I+ A ++K+L
Sbjct: 202 VDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKML 256
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPI 369
DP AR T + L+ + G + +PI
Sbjct: 257 QTDPTARPTINELLNDEFFTSGYIPARLPI 286
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 12/290 (4%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P + D D +RY G+ LG G F Y TD + A K + K+ ++ P
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E + E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +
Sbjct: 87 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPE 143
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 200
Query: 260 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 201 TLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 261 VPRH----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 145/290 (50%), Gaps = 12/290 (4%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P + D D +RY G+ LG G F Y TD + A K + K+ ++ P
Sbjct: 27 PLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQK 86
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
E + E+ I ++L + +VV F+ FEDD++VY+ +E+C LL+ L K+ TE +
Sbjct: 87 EKMSTEIAIHKSL-DNPHVVGFHGFFEDDDFVYVVLEICRRRSLLE--LHKRRKAVTEPE 143
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQ 259
A +RQ ++ H + ++HRD+K N +D +K DFGL+ I+ G++ +
Sbjct: 144 ARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---NDDMDVKIGDFGLATKIEFDGERKK 200
Query: 260 DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 318
+ G+ Y+APEVL +K E D+WS+G I Y LL G+ PF + + +N+
Sbjct: 201 XLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYS 260
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
R I+ A ++++L DP R + A+ L+ + G +P
Sbjct: 261 VPRH----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMRLP 306
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 126 bits (316), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/270 (32%), Positives = 132/270 (48%), Gaps = 22/270 (8%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY + K +G G FG + DK + VAVK IE+ + I E+VKRE+ ++L H
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKI----DENVKREIINHRSLR-H 74
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V+F ++ I ME GGEL +RI R++E +A +Q++ + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYAH 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+K EN L + LK DFG S + + VG+ Y+APEVL +K
Sbjct: 133 AMQVAHRDLKLENTLLDGSPA-PRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKK 191
Query: 277 S--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-------KPDFRRKPWPSI 327
G +DVWS GV Y++L G PF D E F++ + PD+ I
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVH-----I 246
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
S + + ++ V DP R++ + +H W
Sbjct: 247 SPECRHLISRIFVADPAKRISIPEIRNHEW 276
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 80
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++ H + ++H
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-E 280
RD+K N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E
Sbjct: 139 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLL 339
DVWSIG I Y LL G+ PF E KE LR K + P I+ A ++K+L
Sbjct: 196 VDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKML 250
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPI 369
DP AR T + L+ + G + +PI
Sbjct: 251 QTDPTARPTINELLNDEFFTSGYIPARLPI 280
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 104
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++ H + ++H
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-E 280
RD+K N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E
Sbjct: 163 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLL 339
DVWSIG I Y LL G+ PF E KE LR K + P I+ A ++K+L
Sbjct: 220 VDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKML 274
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPI 369
DP AR T + L+ + G + +PI
Sbjct: 275 QTDPTARPTINELLNDEFFTSGYIPARLPI 304
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 125 bits (314), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 142/270 (52%), Gaps = 14/270 (5%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G F + +D + A K + K+ ++ P E + E+ I ++LA H++VV F
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA-HQHVVGF 106
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ FED+++V++ +ELC LL+ L K+ TE +A +RQ++ H + ++H
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-E 280
RD+K N ED +K DFGL+ ++ G++ + + G+ Y+APEVL +K E
Sbjct: 165 RDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLL 339
DVWSIG I Y LL G+ PF E KE LR K + P I+ A ++K+L
Sbjct: 222 VDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKML 276
Query: 340 VKDPRARLTAAQALSHPWVREGGDASEIPI 369
DP AR T + L+ + G + +PI
Sbjct: 277 QTDPTARPTINELLNDEFFTSGYIPARLPI 306
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/261 (31%), Positives = 138/261 (52%), Gaps = 13/261 (4%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G G +A +K +G +VAVK ++ K E + EV I++ H NVV+ Y
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ---RRELLFNEVVIMRDYQ-HFNVVEMY 108
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
++ +++ ME +GG L D + R E+ A V +L+ A H G++HR
Sbjct: 109 KSYLVGEELWVLMEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGVIHR 165
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKS-GPES 281
D+K ++ L D +K +DFG I K K + +VG+ Y++APEV+ R E
Sbjct: 166 DIKSDSILLTL---DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEV 222
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 341
D+WS+G++ ++ G P++ + K LR+ P + K +S +DF++++LV+
Sbjct: 223 DIWSLGIMVIEMVDGEPPYFSDSPVQAMKR-LRDSPPPKLKNSHKVSPVLRDFLERMLVR 281
Query: 342 DPRARLTAAQALSHPWVREGG 362
DP+ R TA + L HP++ + G
Sbjct: 282 DPQERATAQELLDHPFLLQTG 302
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 127/280 (45%), Gaps = 36/280 (12%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
++LG G G +K ++ A+K ++ +REV++ + ++V
Sbjct: 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQD--------CPKARREVELHWRASQCPHIV 74
Query: 161 KFYNAFED----DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +E+ + I ME +GGEL RI + D +TE++A+ +++ + H
Sbjct: 75 RIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH 134
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK 276
+ HRD+KPEN L+ S + ++ LK TDFG A E K
Sbjct: 135 SINIAHRDVKPENLLYTSKRPNAILKLTDFGF--------------------AKETTGEK 174
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
D+WS+GVI YILLCG PF+ G+ + + +F W +S K
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVK 234
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
++ LL +P R+T + ++HPW+ + + P+ S
Sbjct: 235 MLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTS 274
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 130/278 (46%), Gaps = 24/278 (8%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-----VKR 145
+ ++ ++Y+ LG G FG+ + A DK V VK I+K K++ +ED V
Sbjct: 19 EGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTL 78
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-LAKKDSRYTEKDAAVV 204
E+ IL + H N++K + FE+ + + ME + G LD + R E A+ +
Sbjct: 79 EIAILSRVE-HANIIKVLDIFENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLASYI 135
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
RQ++ L ++HRD+K EN + ED ++K DFG + +++ GK F G+
Sbjct: 136 FRQLVSAVGYLRLKDIIHRDIKDENIVI---AEDFTIKLIDFGSAAYLERGKLFYTFCGT 192
Query: 265 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
Y APEVL GPE ++WS+GV Y L+ PF + L +
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE----------LEETVEAAIH 242
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P +S V LL P R T + ++ PWV +
Sbjct: 243 PPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 133/268 (49%), Gaps = 21/268 (7%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA--VEDVKREVKILQALAGHENVVK 161
LG G +G Y A K G VA+K++ P+ ++++ +E+ I+Q +VVK
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQV-------PVESDLQEIIKEISIMQQ-CDSPHVVK 88
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+Y ++ + ++I ME C G + D I+ ++ TE + A +++ L+ H +
Sbjct: 89 YYGSYFKNTDLWIVMEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKI 147
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
HRD+K N L + + K DFG++ K ++G+ +++APEV++
Sbjct: 148 HRDIKAGNILLNT---EGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNC 204
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKK 337
+D+WS+G+ + G+ P+ D + N P RKP W S++ DFVK+
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFTDFVKQ 261
Query: 338 LLVKDPRARLTAAQALSHPWVREGGDAS 365
LVK P R TA Q L HP+VR S
Sbjct: 262 CLVKSPEQRATATQLLQHPFVRSAKGVS 289
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 18/269 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I + LG G FG ++ + NG A+K ++K ++ VE E +++ ++ H
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDE-RLMLSIVTHP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+++ + F+D +++ M+ EGGEL L +K R+ A ++ H
Sbjct: 67 FIIRMWGTFQDAQQIFMIMDYIEGGELFS--LLRKSQRFPNPVAKFYAAEVCLALEYLHS 124
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
+++RD+KPEN L ++ +K TDFG + ++ P + + G+ Y+APEV+ K
Sbjct: 125 KDIIYRDLKPENILL---DKNGHIKITDFGFAKYV-PDVTYX-LCGTPDYIAPEVVSTKP 179
Query: 278 GPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+S D WS G++ Y +L G PF+D ++++L + F P + KD +
Sbjct: 180 YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLS 235
Query: 337 KLLVKDPRARLTAAQ-----ALSHPWVRE 360
+L+ +D RL Q +HPW +E
Sbjct: 236 RLITRDLSQRLGNLQNGTEDVKNHPWFKE 264
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 139/288 (48%), Gaps = 24/288 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +L+G+G +G Y G A+K ++ + E++K+E+ +L+ + H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81
Query: 158 NVVKFYNAFED------DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
N+ +Y AF D+ +++ ME C G + D I K + E+ A + R++LR
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAP 270
+ H H ++HRD+K +N L E++ +K DFG+S + + +G+ Y++AP
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLL---TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAP 198
Query: 271 EVLKRKSGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-PDFRRKP 323
EV+ P+ SD+WS+G+ + G P D + RN P + K
Sbjct: 199 EVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKK 258
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 371
W S + F++ LVK+ R Q + HP++R+ + ++ I +
Sbjct: 259 W---SKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQL 303
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 129/267 (48%), Gaps = 17/267 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A K GD AVK ++K+ ++ VE E +IL H + +
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQ 88
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ F+ + ++ ME GG+L+ I +K R+ E A +++ H G++
Sbjct: 89 LFCCFQTPDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISALMFLHDKGII 146
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGP 279
+RD+K +N L + K DFG+ + I G G+ Y+APE+L+ GP
Sbjct: 147 YRDLKLDNVLL---DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGP 203
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W++GV+ Y +LCG PF + ED +F+ +L ++ + W + A +K +
Sbjct: 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW--LHEDATGILKSFM 259
Query: 340 VKDPRARLTAAQ------ALSHPWVRE 360
K+P RL + L HP+ +E
Sbjct: 260 TKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 114 bits (286), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 128 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 240
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 241 KKDPKQRLGGGPS 253
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 14 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 72
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 73 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 130
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 131 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 187
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 188 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 243
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 244 KKDPKQRLGGGPS 256
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 128 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 240
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 241 KKDPKQRLGGGPS 253
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 128 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 240
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 241 KKDPKQRLGGGPS 253
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 128 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGR 184
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 240
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 241 KKDPKQRLGGGPS 253
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 16 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 75 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 132
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 133 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 189
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 190 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 245
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 246 KKDPKQRLGGGPS 258
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 125/253 (49%), Gaps = 12/253 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K + K +I V E ++LQ H +
Sbjct: 11 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN-TRHPFLTA 69
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
AF+ + + ME GGEL + ++ +TE+ A +++ H +V
Sbjct: 70 LKYAFQTHDRLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVV 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GP 279
+RD+K EN + +D +K TDFGL + I G + G+ Y+APEVL+ G
Sbjct: 128 YRDIKLENLMLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGR 184
Query: 280 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++S AK + LL
Sbjct: 185 AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLL 240
Query: 340 VKDPRARLTAAQA 352
KDP+ RL +
Sbjct: 241 KKDPKQRLGGGPS 253
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D D + + I LG G FG Y A +K G A K IE +ED E++IL
Sbjct: 14 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 70
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
A H +VK A+ D ++I +E C GG + D I+ + D TE VV RQML
Sbjct: 71 -ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLE 128
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 269
H ++HRD+K N L + ++ DFG+S +K +K +G+ Y++A
Sbjct: 129 ALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 185
Query: 270 PEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
PEV+ K P ++D+WS+G+ + P + + ++ ++ P P
Sbjct: 186 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP 245
Query: 324 --WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 246 SKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 20/277 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D D + + I LG G FG Y A +K G A K IE +ED E++IL
Sbjct: 6 DLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS---EEELEDYIVEIEIL 62
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
A H +VK A+ D ++I +E C GG + D I+ + D TE VV RQML
Sbjct: 63 -ATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLE 120
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVA 269
H ++HRD+K N L + ++ DFG+S +K +K +G+ Y++A
Sbjct: 121 ALNFLHSKRIIHRDLKAGNVLMTL---EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMA 177
Query: 270 PEVL---KRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
PEV+ K P ++D+WS+G+ + P + + ++ ++ P P
Sbjct: 178 PEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTP 237
Query: 324 --WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
W S +DF+K L K+P R +AAQ L HP+V
Sbjct: 238 SKW---SVEFRDFLKIALDKNPETRPSAAQLLEHPFV 271
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 137/273 (50%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 125
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HRD+K +N L D S+K TDFG I P + K ++VG+ Y+
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSEMVGTPYW 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EK 241
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + L H +++
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 25/270 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IG+L G G FG Y A +K A K I+ +ED E+ IL A H N+
Sbjct: 42 IGEL-GDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNI 96
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L H +
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK 276
++HRD+K N LF D +K DFG+S K + Q +G+ Y++APEV+ +
Sbjct: 156 IIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCE 210
Query: 277 SGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSIS 328
+ + +DVWS+G+ + P + + ++ +++P +P W S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---S 267
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 25/270 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IG+L G G FG Y A +K A K I+ +ED E+ IL A H N+
Sbjct: 42 IGEL-GDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNI 96
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L H +
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK 276
++HRD+K N LF D +K DFG+S K + Q +G+ Y++APEV+ +
Sbjct: 156 IIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCE 210
Query: 277 SGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSIS 328
+ + +DVWS+G+ + P + + ++ +++P +P W S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---S 267
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 25/270 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IG+L G G FG Y A +K A K I+ +ED E+ IL A H N+
Sbjct: 42 IGEL-GDGAFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNI 96
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L H +
Sbjct: 97 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 155
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK 276
++HRD+K N LF D +K DFG+S K + Q +G+ Y++APEV+ +
Sbjct: 156 IIHRDLKAGNILFTL---DGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCE 210
Query: 277 SGPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSIS 328
+ + +DVWS+G+ + P + + ++ +++P +P W S
Sbjct: 211 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---S 267
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
++ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPFV 297
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 111 bits (277), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 125
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y+
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EK 241
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + L H +++
Sbjct: 242 LSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLK 274
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 68
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 125
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y+
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 182
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 183 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EK 241
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + L H +++
Sbjct: 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLK 274
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 147/332 (44%), Gaps = 62/332 (18%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
KR + DF + LLG G +G AT K G+ VA+KKIE P+
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRT 56
Query: 144 KREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
RE+KIL+ HEN++ +N +FE+ N VYI EL + L R+++ + ++
Sbjct: 57 LREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQ--MLSD 111
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------ 252
+ Q LR H ++HRD+KP N L S + LK DFGL+ I
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAAD 168
Query: 253 --KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDK-- 303
+P + + V + +Y APEV+ K DVWS G I L RRP +
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
Query: 304 -----------------------TEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVK 336
E +E +++ P + P +P ++ D ++
Sbjct: 228 YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 288 RMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 147/332 (44%), Gaps = 62/332 (18%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
KR + DF + LLG G +G AT K G+ VA+KKIE P+
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRT 56
Query: 144 KREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
RE+KIL+ HEN++ +N +FE+ N VYI EL + L R+++ + ++
Sbjct: 57 LREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQ--MLSD 111
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------ 252
+ Q LR H ++HRD+KP N L S + LK DFGL+ I
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAAD 168
Query: 253 --KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDK-- 303
+P + + V + +Y APEV+ K DVWS G I L RRP +
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
Query: 304 -----------------------TEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVK 336
E +E +++ P + P +P ++ D ++
Sbjct: 228 YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 288 RMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 147/332 (44%), Gaps = 62/332 (18%)
Query: 84 KRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
KR + DF + LLG G +G AT K G+ VA+KKIE P+
Sbjct: 3 KRIVYNISSDFQ----LKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDK--PLFALRT 56
Query: 144 KREVKILQALAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
RE+KIL+ HEN++ +N +FE+ N VYI EL + L R+++ + ++
Sbjct: 57 LREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQ--MLSD 111
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI------ 252
+ Q LR H ++HRD+KP N L S + LK DFGL+ I
Sbjct: 112 DHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAAD 168
Query: 253 --KPGKK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDK-- 303
+P + + V + +Y APEV+ K DVWS G I L RRP +
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRD 227
Query: 304 -----------------------TEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVK 336
E +E +++ P + P +P ++ D ++
Sbjct: 228 YRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQ 287
Query: 337 KLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
++LV DP R+TA +AL HP+++ D ++ P
Sbjct: 288 RMLVFDPAKRITAKEALEHPYLQTYHDPNDEP 319
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 157 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 215
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ A +V + + +E
Sbjct: 216 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE-- 270
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
+V+RD+K EN + +D +K TDFGL + IK G + G+ Y+APEVL+
Sbjct: 271 -KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 326
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++ AK
Sbjct: 327 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 382
Query: 335 VKKLLVKDPRARLTAA 350
+ LL KDP+ RL
Sbjct: 383 LSGLLKKDPKQRLGGG 398
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 129/256 (50%), Gaps = 27/256 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 154 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 212
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ + V+A +
Sbjct: 213 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEI---------VSALDY 263
Query: 217 LHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
LH +V+RD+K EN + +D +K TDFGL + IK G + G+ Y+APEV
Sbjct: 264 LHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEV 320
Query: 273 LKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
L+ G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++ A
Sbjct: 321 LEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEA 376
Query: 332 KDFVKKLLVKDPRARL 347
K + LL KDP+ RL
Sbjct: 377 KSLLSGLLKKDPKQRL 392
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 14 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 72
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ A +V + + +E
Sbjct: 73 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE-- 127
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
+V+RD+K EN + +D +K TDFGL + IK G + G+ Y+APEVL+
Sbjct: 128 -KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++ AK
Sbjct: 184 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 239
Query: 335 VKKLLVKDPRARLTAA 350
+ LL KDP+ RL
Sbjct: 240 LSGLLKKDPKQRLGGG 255
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 69
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 126
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HRD+K +N L D S+K TDFG I P + K +VG+ Y+
Sbjct: 127 LQALEFLHSNQVIHRDIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSXMVGTPYW 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EK 242
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + + H +++
Sbjct: 243 LSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 15 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 73
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ A +V + + +E
Sbjct: 74 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE-- 128
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
+V+RD+K EN + +D +K TDFGL + IK G + G+ Y+APEVL+
Sbjct: 129 -KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 184
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++ AK
Sbjct: 185 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 240
Query: 335 VKKLLVKDPRARLTAA 350
+ LL KDP+ RL
Sbjct: 241 LSGLLKKDPKQRLGGG 256
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 129/256 (50%), Gaps = 21/256 (8%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
KLLG G FG + +KA G A+K ++K ++ V E ++LQ + H +
Sbjct: 16 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN-SRHPFLTA 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+F+ + + ME GGEL +R+ ++ +R+ A +V + + +E
Sbjct: 75 LKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE-- 129
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR 275
+V+RD+K EN + +D +K TDFGL + IK G + G+ Y+APEVL+
Sbjct: 130 -KNVVYRDLKLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 276 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 334
G D W +GV+ Y ++CGR PF+++ + +F+ +L + F R ++ AK
Sbjct: 186 NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSL 241
Query: 335 VKKLLVKDPRARLTAA 350
+ LL KDP+ RL
Sbjct: 242 LSGLLKKDPKQRLGGG 257
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 43/289 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G Y A D + G VA+K+I +++ I A+ RE+ +L+ L H N+V
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI----REISLLKELH-HPNIV 82
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ + + + E E L ++L + + + + + Q+LR A CH H +
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKS 277
+HRD+KP+N L S D +LK DFGL+ F P + + V + +Y AP+VL +K
Sbjct: 141 LHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL--------RNKPD----------- 318
D+WSIG I ++ G+ F T+D ++ R P
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 319 ---FRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
F +KPW P D + +L DP R++A A++HP+ ++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 135/289 (46%), Gaps = 43/289 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIE---KNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G +G Y A D + G VA+K+I +++ I A+ RE+ +L+ L H N+V
Sbjct: 29 VGEGTYGVVYKAKD-SQGRIVALKRIRLDAEDEGIPSTAI----REISLLKELH-HPNIV 82
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ + + + E E L ++L + + + + + Q+LR A CH H +
Sbjct: 83 SLIDVIHSERCLTLVFEFMEKD--LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKS 277
+HRD+KP+N L S D +LK DFGL+ F P + + V + +Y AP+VL +K
Sbjct: 141 LHRDLKPQNLLINS---DGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKY 197
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL--------RNKPD----------- 318
D+WSIG I ++ G+ F T+D ++ R P
Sbjct: 198 STSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRT 257
Query: 319 ---FRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
F +KPW P D + +L DP R++A A++HP+ ++
Sbjct: 258 FQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKD 306
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 21/273 (7%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D ++YT + +G G G Y A D A G VA++++ + K+E+ I +
Sbjct: 18 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQ--------QQPKKELIINEI 69
Query: 153 LAGHE----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQM 208
L E N+V + +++ + +++ ME GG L D + ++ E A V R+
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVV---TETCMDEGQIAAVCREC 126
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYY 267
L+ H + ++HR++K +N L D S+K TDFG I P + K +VG+ Y+
Sbjct: 127 LQALEFLHSNQVIHRNIKSDNILLGM---DGSVKLTDFGFCAQITPEQSKRSTMVGTPYW 183
Query: 268 VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
+APEV+ RK+ GP+ D+WS+G++ ++ G P+ ++ + N + P
Sbjct: 184 MAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNP-EK 242
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+S +DF+ + L D R +A + + H +++
Sbjct: 243 LSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLK 275
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
G++K ++ + K+LG G FG ++ + D A+K ++K + + V K
Sbjct: 18 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 76
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E IL + H +VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D +
Sbjct: 77 ERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 133
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
++ H G+++RD+KPEN L E+ +K TDFGLS + I KK G+
Sbjct: 134 AELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGT 190
Query: 265 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFR 320
Y+APEV+ R+ +S D WS GV+ + +L G PF K +L+ K P F
Sbjct: 191 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF- 249
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAA 350
+S A+ ++ L ++P RL A
Sbjct: 250 ------LSPEAQSLLRMLFKRNPANRLGAG 273
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
G++K ++ + K+LG G FG ++ + D A+K ++K + + V K
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E IL + H +VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D +
Sbjct: 76 ERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 132
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
++ H G+++RD+KPEN L E+ +K TDFGLS + I KK G+
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGT 189
Query: 265 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFR 320
Y+APEV+ R+ +S D WS GV+ + +L G PF K +L+ K P F
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF- 248
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAA 350
+S A+ ++ L ++P RL A
Sbjct: 249 ------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 134/270 (49%), Gaps = 22/270 (8%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
G++K ++ + K+LG G FG ++ + D A+K ++K + + V K
Sbjct: 17 GHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVR-TKM 75
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E IL + H +VK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D +
Sbjct: 76 ERDILVEV-NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 132
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
++ H G+++RD+KPEN L E+ +K TDFGLS + I KK G+
Sbjct: 133 AELALALDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKESIDHEKKAYSFCGT 189
Query: 265 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFR 320
Y+APEV+ R+ +S D WS GV+ + +L G PF K +L+ K P F
Sbjct: 190 VEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF- 248
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAA 350
+S A+ ++ L ++P RL A
Sbjct: 249 ------LSPEAQSLLRMLFKRNPANRLGAG 272
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 39/292 (13%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA----------------- 139
+YT+ +G G +G +A ++ + A+K + K K+I
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 140 ------VEDVKREVKILQALAGHENVVKFYNAFEDDN--YVYIAMELCEGGELLDRILAK 191
+E V +E+ IL+ L H NVVK +D N ++Y+ EL G +++ K
Sbjct: 74 IQPRGPIEQVYQEIAILKKL-DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK 132
Query: 192 KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 251
+E A + +++ H ++HRD+KP N L ED +K DFG+S+
Sbjct: 133 P---LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL---VGEDGHIKIADFGVSNE 186
Query: 252 IKPGKKF-QDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTED 306
K + VG+ ++APE L SG DVW++GV Y + G+ PF D+
Sbjct: 187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM 246
Query: 307 GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ ++ +F +P I+ KD + ++L K+P +R+ + HPWV
Sbjct: 247 CLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/269 (30%), Positives = 134/269 (49%), Gaps = 24/269 (8%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
IG+L G FG Y A +K A K I+ +ED E+ IL A H N+
Sbjct: 17 IGEL---GDFGKVYKAQNKETSVLAAAKVIDTKS---EEELEDYMVEIDIL-ASCDHPNI 69
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
VK +AF +N ++I +E C GG + D ++ + + TE VV +Q L H +
Sbjct: 70 VKLLDAFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNK 128
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS--DFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
++HRD+K N LF D +K DFG+S + ++ +G+ Y++APEV+ ++
Sbjct: 129 IIHRDLKAGNILFTL---DGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 278 GPE------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISN 329
+ +DVWS+G+ + P + + ++ +++P +P W S+
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SS 242
Query: 330 SAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ KDF+KK L K+ AR T +Q L HP+V
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFV 271
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 12/266 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + K+LG G FG ++A K A+K ++K+ +++ VE E ++L H
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + F+ ++ ME GG+L+ I + ++ A +++ H
Sbjct: 80 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHS 137
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV-LKR 275
G+V+RD+K +N L +D +K DFG+ + + K + G+ Y+APE+ L +
Sbjct: 138 KGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
K D WS GV+ Y +L G+ PF + E+ +F + + P + R W + AKD +
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDLL 250
Query: 336 KKLLVKDPRARLTAAQAL-SHPWVRE 360
KL V++P RL + HP RE
Sbjct: 251 VKLFVREPEKRLGVRGDIRQHPLFRE 276
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 132/270 (48%), Gaps = 22/270 (8%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVA---TDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
G +K + + K+LG G FG ++ T +G A+K ++K + + V K
Sbjct: 21 GSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVR-TKM 79
Query: 146 EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
E IL A H VVK + AF+ + +Y+ ++ GG+L R+ K+ +TE+D +
Sbjct: 80 ERDIL-ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYL 136
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
++ H G+++RD+KPEN L E+ +K TDFGLS + I KK G+
Sbjct: 137 AELALGLDHLHSLGIIYRDLKPENILL---DEEGHIKLTDFGLSKEAIDHEKKAYSFCGT 193
Query: 265 AYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK---PDFR 320
Y+APEV+ R+ S D WS GV+ + +L G PF K +L+ K P F
Sbjct: 194 VEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQF- 252
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAA 350
+S A+ ++ L ++P RL +
Sbjct: 253 ------LSTEAQSLLRALFKRNPANRLGSG 276
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 34 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 92
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 93 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 150
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L E ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 151 YRDLKPENLLI---DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 205
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 206 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 260
Query: 340 VKDPRARL 347
D R
Sbjct: 261 QVDLTKRF 268
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 127/266 (47%), Gaps = 12/266 (4%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + K+LG G FG ++A K A+K ++K+ +++ VE E ++L H
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 78
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + F+ ++ ME GG+L+ I + ++ A +++ H
Sbjct: 79 FLTHMFCTFQTKENLFFVMEYLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHS 136
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV-LKR 275
G+V+RD+K +N L +D +K DFG+ + + K G+ Y+APE+ L +
Sbjct: 137 KGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ 193
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 335
K D WS GV+ Y +L G+ PF + E+ +F + + P + R W + AKD +
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDLL 249
Query: 336 KKLLVKDPRARLTAAQAL-SHPWVRE 360
KL V++P RL + HP RE
Sbjct: 250 VKLFVREPEKRLGVRGDIRQHPLFRE 275
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYQMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 104 bits (260), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEYSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 157 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 266
Query: 340 VKDPRARL 347
D R
Sbjct: 267 QVDLTKRF 274
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 127 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 185 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 294
Query: 340 VKDPRARL 347
D R
Sbjct: 295 QVDLTKRF 302
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFGL+ +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLMI---DQQGYIKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 128/243 (52%), Gaps = 15/243 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKD 342
D
Sbjct: 274 QVD 276
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 42 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 100
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 101 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 158
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 159 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 213
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 214 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 268
Query: 340 VKDPRARL 347
D R
Sbjct: 269 QVDLTKRF 276
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K + G+ Y+APE++ K ++
Sbjct: 185 YRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIILSKGYNKA 239
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 294
Query: 340 VKDPRARL 347
D R
Sbjct: 295 QVDLTKRF 302
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 134/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 64
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I + +L D I + E+ A Q
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQ 122
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 179
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 230
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 231 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 68 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 126
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 127 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 184
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 185 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 239
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 240 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 294
Query: 340 VKDPRARL 347
D R
Sbjct: 295 QVDLTKRF 302
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 98
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 99 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 156
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 157 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 211
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 212 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 266
Query: 340 VKDPRARL 347
D R
Sbjct: 267 QVDLTKRF 274
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLII---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 144/280 (51%), Gaps = 23/280 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D++ YTIG G +G K++G + K+++ M + + EV +L+
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVVRQM 208
L H N+V++Y+ D + +YI ME CEGG+L I K+ +Y +++ + V
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 209 LRVAA-ECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDI 261
L +A ECH H ++HRD+KP N +F K++ +K DFGL+ + + F ++
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDEDFAKEF 176
Query: 262 VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
VG+ YY++PE + R S E SD+WS+G + Y L PF ++ + ++ K FR
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FR 234
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
R P+ S+ + + ++L R + + L +P + E
Sbjct: 235 RIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 40/285 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +++G G A ++VA+K+I K +++++ +E++ + H
Sbjct: 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQ-CHHP 73
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLD---RILAK---KDSRYTEKDAAVVVRQMLRV 211
N+V +Y +F + +++ M+L GG +LD I+AK K E A ++R++L
Sbjct: 74 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 133
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSA 265
H +G +HRD+K N L ED S++ DFG+S F+ G K + VG+
Sbjct: 134 LEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 266 YYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
++APEV+++ G + +D+WS G+ L G P+ + L+N P
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------ 244
Query: 324 WPSISNSAKD-------------FVKKLLVKDPRARLTAAQALSH 355
PS+ +D + L KDP R TAA+ L H
Sbjct: 245 -PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + ++ TDFGL+ +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLMI---DQQGYIQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 80 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 139 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 194
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 195 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF +E++R + FR++ +S+ + ++ L P R T + +HP
Sbjct: 254 DIPFEHD------EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 357 WVRE 360
W+++
Sbjct: 304 WMQD 307
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 143/304 (47%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 124 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 179
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 180 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF D +E++R + FR++ +S+ + ++ L P R T + +HP
Sbjct: 239 DIPF---EHD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 357 WVRE 360
W+++
Sbjct: 289 WMQD 292
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 133/285 (46%), Gaps = 40/285 (14%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + +++G G A ++VA+K+I K +++++ +E++ + H
Sbjct: 12 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--CQTSMDELLKEIQAMSQ-CHHP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLD---RILAK---KDSRYTEKDAAVVVRQMLRV 211
N+V +Y +F + +++ M+L GG +LD I+AK K E A ++R++L
Sbjct: 69 NIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEG 128
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSA 265
H +G +HRD+K N L ED S++ DFG+S F+ G K + VG+
Sbjct: 129 LEYLHKNGQIHRDVKAGNILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 266 YYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
++APEV+++ G + +D+WS G+ L G P+ + L+N P
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP------ 239
Query: 324 WPSISNSAKD-------------FVKKLLVKDPRARLTAAQALSH 355
PS+ +D + L KDP R TAA+ L H
Sbjct: 240 -PSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 283
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 19/275 (6%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +EV+
Sbjct: 48 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 107
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
LQ L H N +++ + ++ ++ ME C G +L E + A V L
Sbjct: 108 LQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTHGAL 164
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y++A
Sbjct: 165 QGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMA 218
Query: 270 PEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFRRKP 323
PEV+ + + + DVWS+G IT I L R+P F ++ P +
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH 277
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
W S ++FV L K P+ R T+ L H +V
Sbjct: 278 W---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 142/267 (53%), Gaps = 30/267 (11%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGD--RVAVKKIEKNKMILPIA--VEDVKREVKILQAL 153
+ + K+LG G +G ++ + D ++ K+ K I+ A E + E ++L+ +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
+V + AF+ + +++ ++ GGEL + ++ R+TE + + V +++
Sbjct: 116 RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALE 173
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK-PGKKFQDIVGSAYYVAPE 271
H G+++RD+K EN L S + + TDFGLS +F+ ++ D G+ Y+AP+
Sbjct: 174 HLHKLGIIYRDIKLENILLDS---NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 272 VLK-RKSGPES--DVWSIGVITYILLCGRRPFWDKTEDG-------IFKEVLRNKPDFRR 321
+++ SG + D WS+GV+ Y LL G PF T DG I + +L+++P
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLTGASPF---TVDGEKNSQAEISRRILKSEP---- 283
Query: 322 KPWP-SISNSAKDFVKKLLVKDPRARL 347
P+P +S AKD +++LL+KDP+ RL
Sbjct: 284 -PYPQEMSALAKDLIQRLLMKDPKKRL 309
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 23/280 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D++ YTIG G +G K++G + K+++ M + + EV +L+
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVVRQM 208
L H N+V++Y+ D + +YI ME CEGG+L I K+ +Y +++ + V
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 209 LRVAA-ECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDI 261
L +A ECH H ++HRD+KP N +F K++ +K DFGL+ + F +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKTF 176
Query: 262 VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
VG+ YY++PE + R S E SD+WS+G + Y L PF ++ + ++ K FR
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FR 234
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
R P+ S+ + + ++L R + + L +P + E
Sbjct: 235 RIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 128/275 (46%), Gaps = 19/275 (6%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKI 149
+ D ++ ++ + +GHG FG Y A D N + VA+KK+ + +D+ +EV+
Sbjct: 9 FKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRF 68
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
LQ L H N +++ + ++ ++ ME C G +L E + A V L
Sbjct: 69 LQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSA--SDLLEVHKKPLQEVEIAAVTHGAL 125
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
+ A H H ++HRD+K N L E +K DFG + + P F VG+ Y++A
Sbjct: 126 QGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANXF---VGTPYWMA 179
Query: 270 PEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKEVLRNKPDFRRKP 323
PEV+ + + + DVWS+G IT I L R+P F ++ P +
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGH 238
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
W S ++FV L K P+ R T+ L H +V
Sbjct: 239 W---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+AP ++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 91
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 92 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 149
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 150 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKA 204
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 205 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 259
Query: 340 VKDPRARL 347
D R
Sbjct: 260 QVDLTKRF 267
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 80 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 139 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 194
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 195 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF +E++R + FR++ +S + ++ L P R T + +HP
Sbjct: 254 DIPFEHD------EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 357 WVRE 360
W+++
Sbjct: 304 WMQD 307
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 141/296 (47%), Gaps = 29/296 (9%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLD 186
++ LP V EV +L+ + +G V++ + FE D++V I +L D
Sbjct: 61 RISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD 119
Query: 187 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246
I + E+ A Q+L CH G++HRD+K EN L + LK DF
Sbjct: 120 FITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDF 175
Query: 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT 304
G +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG PF
Sbjct: 176 GSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---E 231
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
D +E++R + FR++ +S+ + ++ L P R T + +HPW+++
Sbjct: 232 HD---EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 25 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 84
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 85 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 143
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 144 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 199
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 200 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF +E++R + FR++ +S + ++ L P R T + +HP
Sbjct: 259 DIPFEHD------EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHP 308
Query: 357 WVRE 360
W+++
Sbjct: 309 WMQD 312
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/280 (29%), Positives = 142/280 (50%), Gaps = 23/280 (8%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQ 151
+D++ YTIG G +G K++G + K+++ M + + EV +L+
Sbjct: 6 EDYEVLYTIGT----GSYGRCQKIRRKSDGKILVWKELDYGSMT-EAEKQMLVSEVNLLR 60
Query: 152 ALAGHENVVKFYNAFED--DNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVVRQM 208
L H N+V++Y+ D + +YI ME CEGG+L I K+ +Y +++ + V
Sbjct: 61 ELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQ 119
Query: 209 LRVAA-ECHL-----HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDI 261
L +A ECH H ++HRD+KP N +F K++ +K DFGL+ + F +
Sbjct: 120 LTLALKECHRRSDGGHTVLHRDLKPAN-VFLDGKQN--VKLGDFGLARILNHDTSFAKAF 176
Query: 262 VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 320
VG+ YY++PE + R S E SD+WS+G + Y L PF ++ + ++ K FR
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGK--FR 234
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
R P+ S+ + + ++L R + + L +P + E
Sbjct: 235 RIPY-RYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 65
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 180
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 231
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 232 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 5 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 63
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 64 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 121
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 122 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 178
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 229
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 230 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 65
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 180
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 231
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 232 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 98 YTIGKLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIA--VEDVKREVKILQAL 153
+ + ++LG G +G + AN ++ K+ K MI+ A K E IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H +V AF+ +Y+ +E GGEL ++ +++ + E A + ++
Sbjct: 79 K-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAEISMALG 135
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
H G+++RD+KPEN + +K TDFGL + I G G+ Y+APE+
Sbjct: 136 HLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEI 192
Query: 273 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
L R + D WS+G + Y +L G PF + ++L+ K + P ++ A
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEA 248
Query: 332 KDFVKKLLVKDPRARLT-----AAQALSHPWVR 359
+D +KKLL ++ +RL A + +HP+ R
Sbjct: 249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 6 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 64
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 65 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 122
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 123 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 179
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 230
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 231 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 75/256 (29%), Positives = 127/256 (49%), Gaps = 20/256 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N D+V KI +L A RE + + +
Sbjct: 76 FEILKVIGRGAFGEVAVVKLK-NADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + AF+DDN +Y+ M+ GG+LL +L+K + R E+ A + +M+ H
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVL-- 273
VHRD+KP+N L + ++ DFG + Q VG+ Y++PE+L
Sbjct: 194 LHYVHRDIKPDNILMDM---NGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 274 ----KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--- 326
K + GPE D WS+GV Y +L G PF+ ++ + +++ +K F+ +P+
Sbjct: 251 MEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVT 307
Query: 327 -ISNSAKDFVKKLLVK 341
+S +AKD +++L+
Sbjct: 308 DVSENAKDLIRRLICS 323
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 99
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 100 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 157
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 158 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 214
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 265
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 266 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 60
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 118
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 175
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 226
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 227 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 21/273 (7%)
Query: 98 YTIGKLLGHGQFGYTYVA--TDKANGDRVAVKKIEKNKMILPIA--VEDVKREVKILQAL 153
+ + ++LG G +G + AN ++ K+ K MI+ A K E IL+ +
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 154 AGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H +V AF+ +Y+ +E GGEL ++ +++ + E A + ++
Sbjct: 79 K-HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL--EREGIFMEDTACFYLAEISMALG 135
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
H G+++RD+KPEN + +K TDFGL + I G G+ Y+APE+
Sbjct: 136 HLHQKGIIYRDLKPENIML---NHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEI 192
Query: 273 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 331
L R + D WS+G + Y +L G PF + ++L+ K + P ++ A
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYLTQEA 248
Query: 332 KDFVKKLLVKDPRARLT-----AAQALSHPWVR 359
+D +KKLL ++ +RL A + +HP+ R
Sbjct: 249 RDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 127/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLMI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 79
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 137
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 194
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 245
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 246 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 60
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 118
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 119 VLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 175
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 226
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S + ++ L P R T + +HPW+++
Sbjct: 227 -VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 133/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 7 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 65
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 66 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 123
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 124 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 180
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 231
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 232 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 101 bits (251), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ + K
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLD 186
++ LP V EV +L+ + +G V++ + FE D++V I +L D
Sbjct: 61 RISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD 119
Query: 187 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246
I + E+ A Q+L CH G++HRD+K EN L + LK DF
Sbjct: 120 FITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDF 175
Query: 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT 304
G +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG PF
Sbjct: 176 GSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---E 231
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
D +E++R + FR++ +S + ++ L P R T + +HPW+++
Sbjct: 232 HD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 140/296 (47%), Gaps = 29/296 (9%)
Query: 78 GVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKN 132
G PC + G +K+ + +Y +G LLG G FG Y ++ VA+K +EK+
Sbjct: 1 GAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKD 60
Query: 133 KMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLD 186
++ LP V EV +L+ + +G V++ + FE D++V I +L D
Sbjct: 61 RISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD 119
Query: 187 RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246
I + E+ A Q+L CH G++HRD+K EN L + LK DF
Sbjct: 120 FITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDF 175
Query: 247 GLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKT 304
G +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG PF
Sbjct: 176 GSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---E 231
Query: 305 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
D +E++R + FR++ +S + ++ L P R T + +HPW+++
Sbjct: 232 HD---EEIIRGQVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ + K
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLMI---DQQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 128/248 (51%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + K +G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ TDFG + +K G+ + + G+ +APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + K+ A+K + K +MI E I+ A A
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 129
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A +++ H
Sbjct: 130 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD--VPEKWARFYTAEVVLALDAIHS 186
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVL 273
G +HRD+KP+N L + LK DFG +K K + VG+ Y++PEVL
Sbjct: 187 MGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVL 241
Query: 274 KRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
K + G E D WS+GV Y +L G PF+ + G + +++ +K IS
Sbjct: 242 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 301
Query: 329 NSAKDFVKKLLVKDPRARL 347
AK+ + L D RL
Sbjct: 302 KEAKNLICAFLT-DREVRL 319
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 21 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 79
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 80 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 137
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 138 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 194
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 245
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S + ++ L P R T + +HPW+++
Sbjct: 246 -VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 29 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 87
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 88 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 145
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 146 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 202
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF D +E++R + FR++
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR--- 253
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S + ++ L P R T + +HPW+++
Sbjct: 254 -VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + K+ A+K + K +MI E I+ A A
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A +++ H
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD--VPEKWARFYTAEVVLALDAIHS 191
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVL 273
G +HRD+KP+N L + LK DFG +K K + VG+ Y++PEVL
Sbjct: 192 MGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 274 KRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
K + G E D WS+GV Y +L G PF+ + G + +++ +K IS
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 306
Query: 329 NSAKDFVKKLLVKDPRARL 347
AK+ + L D RL
Sbjct: 307 KEAKNLICAFLT-DREVRL 324
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + K+ A+K + K +MI E I+ A A
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A +++ H
Sbjct: 135 WVVQLFYAFQDDRYLYMVMEYMPGGDLVN-LMSNYD--VPEKWARFYTAEVVLALDAIHS 191
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVL 273
G +HRD+KP+N L + LK DFG +K K + VG+ Y++PEVL
Sbjct: 192 MGFIHRDVKPDNMLLDKS---GHLKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVL 246
Query: 274 KRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 328
K + G E D WS+GV Y +L G PF+ + G + +++ +K IS
Sbjct: 247 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 306
Query: 329 NSAKDFVKKLLVKDPRARL 347
AK+ + L D RL
Sbjct: 307 KEAKNLICAFLT-DREVRL 324
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYVPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + +K DFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 134/315 (42%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL A
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLA 79
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 134
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + S LK DFGL+ P + V
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTT---SDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDK-----------------T 304
+ +Y APE++ G D+WS+G I +L R F K
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 305 ED---GI---FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
ED GI + L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 252 EDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 312 HPYLAQYYDPSDEPI 326
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 125 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 180
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 181 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S+ + ++ L P R T + +HP
Sbjct: 240 DIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 357 WVRE 360
W+++
Sbjct: 290 WMQD 293
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 124 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 179
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 180 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S+ + ++ L P R T + +HP
Sbjct: 239 DIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 357 WVRE 360
W+++
Sbjct: 289 WMQD 292
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 125/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG G FG + G+ A+K ++K K++ +E E +ILQA+ + K
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLTK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GGE+ + ++ R+ E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVMEYAPGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN + + +K TDFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLMID---QQGYIKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 125 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 180
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 181 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S+ + ++ L P R T + +HP
Sbjct: 240 DIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 357 WVRE 360
W+++
Sbjct: 290 WMQD 293
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 142/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 124 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 179
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 180 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S+ + ++ L P R T + +HP
Sbjct: 239 DIPF-EHDEEIIGGQVF-----FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 357 WVRE 360
W+++
Sbjct: 289 WMQD 292
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 124/257 (48%), Gaps = 15/257 (5%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + K++G G FG + KA+ A+K + K +MI E I+ A A
Sbjct: 77 YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANSP 135
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VV+ + AF+DD Y+Y+ ME GG+L++ +++ D EK A +++ H
Sbjct: 136 WVVQLFCAFQDDKYLYMVMEYMPGGDLVN-LMSNYD--VPEKWAKFYTAEVVLALDAIHS 192
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VGSAYYVAPEVLKR 275
GL+HRD+KP+N L + LK DFG + G D VG+ Y++PEVLK
Sbjct: 193 MGLIHRDVKPDNMLL---DKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 276 KSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
+ G E D WS+GV + +L G PF+ + G + +++ +K IS
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKH 309
Query: 331 AKDFVKKLLVKDPRARL 347
AK+ + L D RL
Sbjct: 310 AKNLICAFLT-DREVRL 325
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 139/350 (39%), Gaps = 83/350 (23%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D+ R+Y + K LG G +G + + D+ G+ VAVKKI + + RE+ IL
Sbjct: 4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKI-FDAFQNSTDAQRTFREIMIL 62
Query: 151 QALAGHENVVKFYNAFEDDN-----YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
L+GHEN+V N DN V+ ME + IL +Y VV
Sbjct: 63 TELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQY-------VV 115
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---------------- 249
Q+++V H GL+HRDMKP N L + + +K DFGLS
Sbjct: 116 YQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIPLS 172
Query: 250 ------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF- 300
+F D V + +Y APE+L K D+WS+G I +LCG+ F
Sbjct: 173 INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
Query: 301 ----------------WDKTED---------GIFKEVLRNKPDFRR-------------- 321
+ ED E L+ K + R+
Sbjct: 233 GSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLL 292
Query: 322 ---KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
P + A D + KLL +P R++A AL HP+V + +E P
Sbjct: 293 LKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 125 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 180
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 181 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S + ++ L P R T + +HP
Sbjct: 240 DIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 357 WVRE 360
W+++
Sbjct: 290 WMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 5 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 64
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 65 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 123
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 124 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 179
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 180 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S + ++ L P R T + +HP
Sbjct: 239 DIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHP 288
Query: 357 WVRE 360
W+++
Sbjct: 289 WMQD 292
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 134/303 (44%), Gaps = 49/303 (16%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGH 156
IGK+ G G +G + ++ G VA+KK E + +I IA+ RE+++L+ L H
Sbjct: 8 IGKI-GEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIAL----REIRMLKQLK-H 61
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+V F +++ E C+ L + L + E + Q L+ CH
Sbjct: 62 PNLVNLLEVFRRKRRLHLVFEYCDHTVLHE--LDRYQRGVPEHLVKSITWQTLQAVNFCH 119
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVL-- 273
H +HRD+KPEN L + S +K DFG + + P + D V + +Y +PE+L
Sbjct: 120 KHNCIHRDVKPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVG 176
Query: 274 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG----IFKEVL-----RNKPDFRRKPW 324
+ GP DVW+IG + LL G P W D + ++ L R++ F +
Sbjct: 177 DTQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQY 235
Query: 325 -------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW---VREGG 362
P+IS A +K L DP RLT Q L HP+ +RE
Sbjct: 236 FSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIE 295
Query: 363 DAS 365
D +
Sbjct: 296 DLA 298
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G FG Y ++ V
Sbjct: 6 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPV 65
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQAL-AGHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ + +G V++ + FE D++V I
Sbjct: 66 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 124
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 125 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 180
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 181 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF + E+ I +V FR++ +S + ++ L P R T + +HP
Sbjct: 240 DIPF-EHDEEIIGGQVF-----FRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHP 289
Query: 357 WVRE 360
W+++
Sbjct: 290 WMQD 293
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 132/275 (48%), Gaps = 24/275 (8%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMI----LPIAVEDVKREVKI 149
+ +Y +G LLG G FG Y ++ VA+K +EK+++ LP V EV +
Sbjct: 2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTR-VPMEVVL 60
Query: 150 LQAL-AGHENVVKFYNAFE-DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
L+ + +G V++ + FE D++V I +L D I + E+ A Q
Sbjct: 61 LKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQ 118
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L CH G++HRD+K EN L + LK DFG +K + D G+ Y
Sbjct: 119 VLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVY 175
Query: 268 VAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE ++ R G + VWS+G++ Y ++CG PF + E+ I +V FR++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR--- 226
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+S+ + ++ L P R T + +HPW+++
Sbjct: 227 -VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+ LG G FG + K G+ A+K ++K K++ +E E +I QA+ +VK
Sbjct: 48 RTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAV-NFPFLVK 106
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ +E GGE+ + ++ R++E A Q++ H L+
Sbjct: 107 LEFSFKDNSNLYMVLEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 164
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + +K DFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 165 YRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 219
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 220 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 274
Query: 340 VKDPRARL 347
D R
Sbjct: 275 QVDLTKRF 282
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GG++ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + +K DFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 126/248 (50%), Gaps = 15/248 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K +G G FG + G+ A+K ++K K++ +E E +ILQA+ +VK
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV-NFPFLVK 105
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+F+D++ +Y+ ME GG++ + ++ R++E A Q++ H L+
Sbjct: 106 LEFSFKDNSNLYMVMEYMPGGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + +K DFG + +K G+ + + G+ Y+APE++ K ++
Sbjct: 164 YRDLKPENLLI---DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKA 218
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLL 339
D W++GV+ Y + G PF+ I+++++ K F PS S+ KD ++ LL
Sbjct: 219 VDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLL 273
Query: 340 VKDPRARL 347
D R
Sbjct: 274 QVDLTKRF 281
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 20/259 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N +R+ KI +L A RE + + +
Sbjct: 76 FEIIKVIGRGAFGEVAVVKMK-NTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + AF+D+N++Y+ M+ GG+LL +L+K + + E A + +M+ H
Sbjct: 135 WITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 193
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKR 275
VHRD+KP+N L + ++ DFG + Q VG+ Y++PE+L+
Sbjct: 194 LHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 250
Query: 276 ------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--- 326
K GPE D WS+GV Y +L G PF+ ++ + +++ ++ F+ +PS
Sbjct: 251 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVT 307
Query: 327 -ISNSAKDFVKKLLVKDPR 344
+S AKD +++L+ R
Sbjct: 308 DVSEEAKDLIQRLICSRER 326
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 127/259 (49%), Gaps = 20/259 (7%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G FG V K N +R+ KI +L A RE + + +
Sbjct: 92 FEIIKVIGRGAFGEVAVVKMK-NTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + AF+D+N++Y+ M+ GG+LL +L+K + + E A + +M+ H
Sbjct: 151 WITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQ 209
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKR 275
VHRD+KP+N L + ++ DFG + Q VG+ Y++PE+L+
Sbjct: 210 LHYVHRDIKPDNVLLDV---NGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQA 266
Query: 276 ------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--- 326
K GPE D WS+GV Y +L G PF+ ++ + +++ ++ F+ +PS
Sbjct: 267 MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVT 323
Query: 327 -ISNSAKDFVKKLLVKDPR 344
+S AKD +++L+ R
Sbjct: 324 DVSEEAKDLIQRLICSRER 342
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 126/261 (48%), Gaps = 18/261 (6%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + +G + +K+I ++M E+ +REV +L + H N+V++
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK-HPNIVQYR 89
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+FE++ +YI M+ CEGG+L RI A+K + E Q+ H ++HR
Sbjct: 90 ESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHR 149
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPES 281
D+K +N +D +++ DFG++ + + + +G+ YY++PE+ + K +S
Sbjct: 150 DIKSQNIFL---TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKS 206
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKK 337
D+W++G + Y L + F + + +++ +P + S + V +
Sbjct: 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-------FPPVSLHYSYDLRSLVSQ 259
Query: 338 LLVKDPRARLTAAQALSHPWV 358
L ++PR R + L ++
Sbjct: 260 LFKRNPRDRPSVNSILEKGFI 280
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL A
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLA 79
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 134
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 252 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 312 HPYLAQYYDPSDEPI 326
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 136/309 (44%), Gaps = 47/309 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ + Y +G G +G A DK +G++VA+KK+ + I + RE+ +L+
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKH 79
Query: 153 LAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ HENV+ + F + + Y+ M + L +I+ K ++E+ +V
Sbjct: 80 MQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGLK---FSEEKIQYLVY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML+ H G+VHRD+KP N + ED LK DFGL+ + V + +
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HADAEMTGYVVTRW 188
Query: 267 YVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-----------------------PFW 301
Y APEV+ D+WS+G I +L G+ F
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248
Query: 302 DKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
K D K +++ P RK + P S A D ++K+L D RLTAAQAL+HP+
Sbjct: 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308
Query: 358 VREGGDASE 366
D E
Sbjct: 309 FEPFRDPEE 317
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 131/299 (43%), Gaps = 54/299 (18%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG+G + Y +K G VA+K K++ + A+ RE+ +++ L HEN+V+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAI----REISLMKELK-HENIVR 67
Query: 162 FYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVR-QMLRVAAECHLH 218
Y+ +N + + E + + +D R E + + Q+L+ A CH +
Sbjct: 68 LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KR 275
++HRD+KP+N L + LK DFGL+ F P F V + +Y AP+VL R
Sbjct: 128 KILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSR 184
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP----WPSISNSA 331
D+WS G I ++ G +P + T D +E L+ D P WPS++
Sbjct: 185 TYSTSIDIWSCGCILAEMITG-KPLFPGTND---EEQLKLIFDIMGTPNESLWPSVTKLP 240
Query: 332 K------------------------------DFVKKLLVKDPRARLTAAQALSHPWVRE 360
K DF+ LL +P RL+A QAL HPW E
Sbjct: 241 KYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAE 299
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 127/296 (42%), Gaps = 58/296 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A + G+ A+KKI K I + RE+ IL+ L H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVKLY 66
Query: 164 NAFEDDNYVYIAME-----------LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ + + E +CEGG L+ + AK + Q+L
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS-----------FLLQLLNGI 113
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPE 271
A CH ++HRD+KP+N L E LK DFGL+ F P +K+ V + +Y AP+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 272 VL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
VL +K D+WS+G I ++ G F +E + R K WP+++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 330 -------------------------SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S D + K+L DP R+TA QAL H + +E
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 136/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L D + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KPEN L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 134/301 (44%), Gaps = 57/301 (18%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N ++V VK ++ P+ +KRE+KIL+ L G
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVK------ILKPVKKNKIKREIKILENLRGGP 92
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAVVVRQMLRVA 212
N++ + +D + L+ + D + T+ D + ++L+
Sbjct: 93 NIITLADIVKD--------PVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKAL 144
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
CH G++HRD+KP N + E L+ D+GL++F PG+++ V S Y+ PE+
Sbjct: 145 DYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPEL 202
Query: 273 L--KRKSGPESDVWSIGVITYILLCGRRPFW------------------DKTEDGIFKEV 312
L + D+WS+G + ++ + PF+ + D I K
Sbjct: 203 LVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYN 262
Query: 313 LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ P F RK W +S A DF+ KLL D ++RLTA +A+ HP
Sbjct: 263 IELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHP 322
Query: 357 W 357
+
Sbjct: 323 Y 323
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 127/296 (42%), Gaps = 58/296 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A + G+ A+KKI K I + RE+ IL+ L H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVKLY 66
Query: 164 NAFEDDNYVYIAME-----------LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ + + E +CEGG L+ + AK + Q+L
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS-----------FLLQLLNGI 113
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPE 271
A CH ++HRD+KP+N L E LK DFGL+ F P +K+ V + +Y AP+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPD 170
Query: 272 VL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
VL +K D+WS+G I ++ G F +E + R K WP+++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 330 -------------------------SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S D + K+L DP R+TA QAL H + +E
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 127/296 (42%), Gaps = 58/296 (19%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A + G+ A+KKI K I + RE+ IL+ L H N+VK Y
Sbjct: 10 IGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTI-REISILKELK-HSNIVKLY 66
Query: 164 NAFEDDNYVYIAME-----------LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ + + E +CEGG L+ + AK + Q+L
Sbjct: 67 DVIHTKKRLVLVFEHLDQDLKKLLDVCEGG--LESVTAKS-----------FLLQLLNGI 113
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPE 271
A CH ++HRD+KP+N L E LK DFGL+ F P +K+ + + +Y AP+
Sbjct: 114 AYCHDRRVLHRDLKPQNLLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPD 170
Query: 272 VL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 329
VL +K D+WS+G I ++ G F +E + R K WP+++
Sbjct: 171 VLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTE 230
Query: 330 -------------------------SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
S D + K+L DP R+TA QAL H + +E
Sbjct: 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 132
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + + LK DFGL+ P + V
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 310 HPYLEQYYDPSDEPI 324
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 136/309 (44%), Gaps = 47/309 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+ + Y +G G +G A DK +G++VA+KK+ + I + RE+ +L+
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKH 97
Query: 153 LAGHENVVKFYNAFEDDNYV------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ HENV+ + F + + Y+ M + L +I+ + ++E+ +V
Sbjct: 98 MQ-HENVIGLLDVFTPASSLRNFYDFYLVMPFMQTD--LQKIMGME---FSEEKIQYLVY 151
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML+ H G+VHRD+KP N + ED LK DFGL+ + V + +
Sbjct: 152 QMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HADAEMTGYVVTRW 206
Query: 267 YVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-----------------------PFW 301
Y APEV+ D+WS+G I +L G+ F
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 266
Query: 302 DKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
K D K +++ P RK + P S A D ++K+L D RLTAAQAL+HP+
Sbjct: 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 326
Query: 358 VREGGDASE 366
D E
Sbjct: 327 FEPFRDPEE 335
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 132
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + + LK DFGL+ P + V
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 310 HPYLEQYYDPSDEPI 324
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 132
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 310 HPYLEQYYDPSDEPI 324
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KSQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + EDS LK DFGL + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCRHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 132
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + + LK DFGL+ P + V
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARVADPDHDHTGFLTEYVA 189
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 250 EDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 310 HPYLEQYYDPSDEPI 324
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG +A K + A+K ++K+ +I VE E ++L L + +
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQL 85
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
++ F+ + +Y ME GG+L+ I ++ ++ E A ++ H G+++
Sbjct: 86 HSCFQTVDRLYFVMEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIY 143
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
RD+K +N + S + +K DFG+ + + G ++ G+ Y+APE++ + G
Sbjct: 144 RDLKLDNVMLDS---EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKS 200
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K L+
Sbjct: 201 VDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMT 256
Query: 341 KDPRARLTAA 350
K P RL
Sbjct: 257 KHPAKRLGCG 266
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 22 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 79
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 80 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 134
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 191
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 192 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 251
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 252 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 311
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 312 HPYLEQYYDPSDEPI 326
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + + LK DFGL+ P + V
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 314 HPYLEQYYDPSDEPI 328
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 14 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 66
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 67 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 124
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 125 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 182
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 183 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 242
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 243 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 302
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 303 AHSFFDELRDPN 314
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 142
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + EDS LK DFGL+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 362 GDASEIPI 369
D + P+
Sbjct: 318 HDPDDEPV 325
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 28 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 85
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 86 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 140
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 197
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 198 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 257
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 258 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 317
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 318 HPYLEQYYDPSDEPI 332
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 20 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 77
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 78 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 132
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 189
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 190 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 249
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 250 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 309
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 310 HPYLEQYYDPSDEPI 324
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 32 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 84
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 85 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 142
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 143 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 200
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 201 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 260
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 261 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 320
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 321 AHSFFDELRDPN 332
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 17 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 69
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 70 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 127
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 128 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 185
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 186 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 245
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 246 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 305
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 306 AHSFFDELRDPN 317
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 136/308 (44%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 138
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + EDS LK DFGL+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 362 GDASEIPI 369
D + P+
Sbjct: 314 HDPDDEPV 321
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 97
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 98 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 152
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 270 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 330 HPYLEQYYDPSDEPI 344
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 21 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 73
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 74 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 131
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 132 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 189
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 190 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 249
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 250 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 309
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 310 AHSFFDELRDPN 321
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 75
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 76 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 130
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 247
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 248 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 307
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 308 HPYLEQYYDPSDEPI 322
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 11/250 (4%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K++G G FG +A KA AVK ++K ++ + + E +L H +V
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ +F+ + +Y ++ GGEL + +++ + E A ++ H +V
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLNIV 161
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE 280
+RD+KPEN L S + TDFGL + I+ G+ Y+APEVL ++
Sbjct: 162 YRDLKPENILLDS---QGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDR 218
Query: 281 S-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 339
+ D W +G + Y +L G PF+ + ++ +L NKP + K P+I+NSA+ ++ LL
Sbjct: 219 TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL-NKP-LQLK--PNITNSARHLLEGLL 274
Query: 340 VKDPRARLTA 349
KD RL A
Sbjct: 275 QKDRTKRLGA 284
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLXEXVA 193
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 314 HPYLEQYYDPSDEPI 328
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 82
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 83 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 137
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLXEXVA 194
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 255 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 314
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 315 HPYLEQYYDPSDEPI 329
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 25 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 82
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 83 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 137
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 194
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 195 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 254
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 255 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 314
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 315 HPYLEQYYDPSDEPI 329
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 26 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 83
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 84 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 138
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 195
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 196 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 255
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 256 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 315
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 316 HPYLEQYYDPSDEPI 330
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 17 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 74
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 75 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 129
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 186
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 187 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 246
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 247 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 306
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 307 HPYLEQYYDPSDEPI 321
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 141/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 314 HPYLEQYYDPSDEPI 328
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 99
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 100 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 157
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 216 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 336 AHSFFDELRDPN 347
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 47 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 99
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 100 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 157
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 158 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 215
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 216 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 275
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 276 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 335
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 336 AHSFFDELRDPN 347
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYXQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + + LK DFGL+ P + V
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 314 HPYLEQYYDPSDEPI 328
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 18 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 75
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 76 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 130
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 187
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 188 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQ 247
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 248 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 307
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 308 HPYLEQYYDPSDEPI 322
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 25 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 77
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 78 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 135
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 136 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 254 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 313
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 314 AHSFFDELRDPN 325
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 25 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 77
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 78 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 135
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 136 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 193
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 194 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 253
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 254 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 313
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 314 AHSFFDELRDPN 325
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 142
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 362 GDASEIPI 369
D + P+
Sbjct: 318 HDPDDEPV 325
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 26 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 78
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 79 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 136
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 137 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 194
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 195 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 254
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 255 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 314
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 315 AHSFFDELRDPN 326
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 18 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 70
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 71 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 128
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 129 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 186
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 187 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 246
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 247 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 306
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 307 AHSFFDELRDPN 318
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 123/268 (45%), Gaps = 14/268 (5%)
Query: 85 RTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
R D GY+ + R I K +G GQF Y A +G VA+KK++ ++ A D
Sbjct: 23 RPDMGYNTLANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCI 80
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAA 202
+E+ +L+ L H NV+K+Y +F +DN + I +EL + G+L I K+ E+
Sbjct: 81 KEIDLLKQL-NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVW 139
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDI 261
Q+ H ++HRD+KP N + +K D GL F +
Sbjct: 140 KYFVQLCSALEHMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSL 196
Query: 262 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPD 318
VG+ YY++PE + +SD+WS+G + Y + + PF+ + + K++ + D
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EQCD 254
Query: 319 FRRKPWPSISNSAKDFVKKLLVKDPRAR 346
+ P S + V + DP R
Sbjct: 255 YPPLPSDHYSEELRQLVNMCINPDPEKR 282
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L D + A + + Q+L+ A CH H ++HR
Sbjct: 71 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 130 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 139/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 314
+ S YY APE++ + S DVWS G + LL G+ F + E+++
Sbjct: 182 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 315 ----------------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 41 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 93
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 94 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 151
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 152 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 209
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 210 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 269
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 270 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 329
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 330 AHSFFDELRDPN 341
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L D + A + + Q+L+ A CH H ++HR
Sbjct: 72 DVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 131 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 142/312 (45%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 49 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 101
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 102 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 159
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 160 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 217
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 218 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 277
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 278 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 337
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 338 AHSFFDELRDPN 349
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 140/307 (45%), Gaps = 46/307 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 92 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 144
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 145 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 202
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 203 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 260
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 261 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 320
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 321 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 380
Query: 354 SHPWVRE 360
+H + E
Sbjct: 381 AHSFFDE 387
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 140/307 (45%), Gaps = 46/307 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ ++K RE++
Sbjct: 51 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF-------KNRELQ 103
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L E + R+ A+ SR + +
Sbjct: 104 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRV-ARHYSRAKQTLPVIY 161
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 162 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 219
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 220 YICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 279
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 280 PTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 339
Query: 354 SHPWVRE 360
+H + E
Sbjct: 340 AHSFFDE 346
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 136/308 (44%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K ++ T+ ++ Q+LR
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCAKLTDDHVQFLIYQILR 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 362 GDASEIPI 369
D + P+
Sbjct: 308 HDPDDEPV 315
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KCQHLSNDHICYFLYQ 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 314 HPYLEQYYDPSDEPI 328
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 187
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 362 GDASEIPI 369
D + P+
Sbjct: 308 HDPDDEPV 315
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 40/288 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQMLRVAAECHLHGL 220
+ +N +Y+ E +D S T ++ + Q+L+ A CH H +
Sbjct: 72 DVIHTENKLYLVFEFLS----MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKS 277
+HRD+KPEN L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 LHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR--- 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 321 --------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 134/313 (42%), Gaps = 58/313 (18%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RY K LG G G + A D RVA+KKI P +V+ RE+KI++
Sbjct: 8 DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD---PQSVKHALREIKIIRR 64
Query: 153 LAGHENVVKFY-------NAFEDD-------NYVYIAMELCEGGELLDRILAKKDSRYTE 198
L H+N+VK + + DD N VYI E E D + E
Sbjct: 65 L-DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMET----DLANVLEQGPLLE 119
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---- 254
+ A + + Q+LR H ++HRD+KP N + ED LK DFGL+ + P
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSH 177
Query: 255 -GKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 311
G + +V + +Y +P +L + D+W+ G I +L G+ F E +
Sbjct: 178 KGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQL 236
Query: 312 VLRNKPDFRR----------------------KP----WPSISNSAKDFVKKLLVKDPRA 345
+L + P KP P IS A DF++++L P
Sbjct: 237 ILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMD 296
Query: 346 RLTAAQALSHPWV 358
RLTA +ALSHP++
Sbjct: 297 RLTAEEALSHPYM 309
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 136/288 (47%), Gaps = 40/288 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQMLRVAAECHLHGL 220
+ +N +Y+ E +D S T ++ + Q+L+ A CH H +
Sbjct: 70 DVIHTENKLYLVFEFLS----MDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 125
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKS 277
+HRD+KPEN L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 126 LHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 182
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR--- 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 183 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 242
Query: 321 --------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 243 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMAGFVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ K + I + RE+++L+ + H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSI-IHAKRTYRELRLLKHMK-H 92
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 148
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 149 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 362 GDASEIPI 369
D + P+
Sbjct: 324 HDPDDEPV 331
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 142
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 362 GDASEIPI 369
D + P+
Sbjct: 318 HDPDDEPV 325
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 131/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA++KI + + RE+KIL
Sbjct: 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEH--QTYCQRTLREIKILLR 81
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VYI +L E L ++L K + + Q
Sbjct: 82 FR-HENIIGINDIIRAPTIEQMKDVYIVQDLMETD--LYKLL--KTQHLSNDHICYFLYQ 136
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + LK DFGL+ P + V
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGFLTEYVA 193
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 194 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 253
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 254 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 314 HPYLEQYYDPSDEPI 328
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KXQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KXQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 248 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 362 GDASEIPI 369
D + P+
Sbjct: 308 HDPDDEPV 315
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KPEN L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 129 DLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 90
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 91 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 146
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 147 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 201
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 202 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 261
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 262 SESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 321
Query: 362 GDASEIPI 369
D + P+
Sbjct: 322 HDPDDEPV 329
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGXVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 130/315 (41%), Gaps = 48/315 (15%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D RYT +G G +G A D N RVA+KKI + + RE+KIL
Sbjct: 40 DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEH--QTYCQRTLREIKILLR 97
Query: 153 LAGHENVVKFYN-----AFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
HEN++ + E VY+ L G +L + K + + Q
Sbjct: 98 FR-HENIIGINDIIRAPTIEQMKDVYLVTHLM-GADLYKLL---KTQHLSNDHICYFLYQ 152
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG 263
+LR H ++HRD+KP N L + + LK DFGL+ P + V
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARVADPDHDHTGFLTEYVA 209
Query: 264 SAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRPF-----WDKTED--GIF----- 309
+ +Y APE++ G D+WS+G I +L R F D+ GI
Sbjct: 210 TRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ 269
Query: 310 -----------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ L + P + PW P+ + A D + K+L +P R+ QAL+
Sbjct: 270 EDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 329
Query: 355 HPWVREGGDASEIPI 369
HP++ + D S+ PI
Sbjct: 330 HPYLEQYYDPSDEPI 344
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 138
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 362 GDASEIPI 369
D + P+
Sbjct: 314 HDPDDEPV 321
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 91
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 147
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 148 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 202
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 362 GDASEIPI 369
D + P+
Sbjct: 323 HDPDDEPV 330
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 86
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 87 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 142
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 143 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 197
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 198 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 257
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 258 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 317
Query: 362 GDASEIPI 369
D + P+
Sbjct: 318 HDPDDEPV 325
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 103
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 159
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 160 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 214
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 362 GDASEIPI 369
D + P+
Sbjct: 335 HDPDDEPV 342
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 103
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 104 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 159
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 160 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMXGYVATRWYRAP 214
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 215 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 274
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 275 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 334
Query: 362 GDASEIPI 369
D + P+
Sbjct: 335 HDPDDEPV 342
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KPEN L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 130 DLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 79
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 80 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 135
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 136 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 190
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 191 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 250
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 251 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 310
Query: 362 GDASEIPI 369
D + P+
Sbjct: 311 HDPDDEPV 318
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 85
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 86 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 141
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 142 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 196
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 197 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 256
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 257 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 316
Query: 362 GDASEIPI 369
D + P+
Sbjct: 317 HDPDDEPV 324
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 78
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 79 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 134
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 135 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 189
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 190 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 249
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 250 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 309
Query: 362 GDASEIPI 369
D + P+
Sbjct: 310 HDPDDEPV 317
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 138
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 362 GDASEIPI 369
D + P+
Sbjct: 314 HDPDDEPV 321
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 91
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 92 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 147
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 148 GLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAP 202
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 203 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 262
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 263 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 322
Query: 362 GDASEIPI 369
D + P+
Sbjct: 323 HDPDDEPV 330
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 92
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 148
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 149 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 362 GDASEIPI 369
D + P+
Sbjct: 324 HDPDDEPV 331
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 92
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 93 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 148
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 149 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 203
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 204 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 263
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 264 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 323
Query: 362 GDASEIPI 369
D + P+
Sbjct: 324 HDPDDEPV 331
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 77
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 133
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 134 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 188
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 362 GDASEIPI 369
D + P+
Sbjct: 309 HDPDDEPV 316
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 77
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 78 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 133
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 134 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 188
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 189 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 248
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 249 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 308
Query: 362 GDASEIPI 369
D + P+
Sbjct: 309 HDPDDEPV 316
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 76
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 77 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 132
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 133 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 187
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 188 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 247
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 248 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 307
Query: 362 GDASEIPI 369
D + P+
Sbjct: 308 HDPDDEPV 315
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 82
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 83 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 138
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 139 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 193
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 194 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 253
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 254 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 313
Query: 362 GDASEIPI 369
D + P+
Sbjct: 314 HDPDDEPV 321
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 27/283 (9%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
D+ YD++ DR +LG G +G Y D +N R+A+K+I + + + E
Sbjct: 18 DYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEE 69
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS-RYTEKDAAVVV 205
+ + + L H+N+V++ +F ++ ++ I ME GG L + +K + E+
Sbjct: 70 IALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 128
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD---FIKPGKKFQDIV 262
+Q+L H + +VHRD+K +N L + LK +DFG S I P +
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPCT--ETFT 184
Query: 263 GSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFK-EVLRNK 316
G+ Y+APE++ R G +D+WS+G + G+ PF++ E +FK + +
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH 244
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
P+ S+S AK F+ K DP R A L +++
Sbjct: 245 PEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 128/267 (47%), Gaps = 14/267 (5%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
D D +FD + I + +G G FG + A+K + K K + V +V +E
Sbjct: 7 DENEDVNFDH-FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKE 65
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
++I+Q L H +V + +F+D+ +++ ++L GG+L R +++ + E+ + +
Sbjct: 66 LQIMQGLE-HPFLVNLWYSFQDEEDMFMVVDLLLGGDL--RYHLQQNVHFKEETVKLFIC 122
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+++ ++HRDMKP+N L E + TDF ++ + + + G+
Sbjct: 123 ELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAAMLPRETQITTMAGTKP 179
Query: 267 YVAPEVLKRKSGP----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
Y+APE+ + G D WS+GV Y LL GRRP+ ++ KE++ +
Sbjct: 180 YMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS-KEIVHTF-ETTVV 237
Query: 323 PWPSI-SNSAKDFVKKLLVKDPRARLT 348
+PS S +KKLL +P R +
Sbjct: 238 TYPSAWSQEMVSLLKKLLEPNPDQRFS 264
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 27/283 (9%)
Query: 87 DFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
D+ YD++ DR +LG G +G Y D +N R+A+K+I + + + E
Sbjct: 4 DYEYDENGDRV-----VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYS---QPLHEE 55
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDS-RYTEKDAAVVV 205
+ + + L H+N+V++ +F ++ ++ I ME GG L + +K + E+
Sbjct: 56 IALHKHLK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD---FIKPGKKFQDIV 262
+Q+L H + +VHRD+K +N L + LK +DFG S I P +
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYS--GVLKISDFGTSKRLAGINPCT--ETFT 170
Query: 263 GSAYYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFK-EVLRNK 316
G+ Y+APE++ R G +D+WS+G + G+ PF++ E +FK + +
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVH 230
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
P+ S+S AK F+ K DP R A L +++
Sbjct: 231 PEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 269
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 140/312 (44%), Gaps = 46/312 (14%)
Query: 89 GYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVK 148
G D+ + YT K++G+G FG Y A +G+ VA+KK+ + K RE++
Sbjct: 13 GPDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAF-------KNRELQ 65
Query: 149 ILQALAGHENVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
I++ L H N+V+ FY++ E + VY+ + L + R+ A+ SR + +
Sbjct: 66 IMRKL-DHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRV-ARHYSRAKQTLPVIY 123
Query: 205 VR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
V+ Q+ R A H G+ HRD+KP+N L + + LK DFG + + G+
Sbjct: 124 VKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLCDFGSAKQLVRGEPNVS 181
Query: 261 IVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIF-------- 309
+ S YY APE++ + S DVWS G + LL G+ F D D +
Sbjct: 182 XICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGT 241
Query: 310 --KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+E +R P + PW P A +LL P ARLT +A
Sbjct: 242 PTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEAC 301
Query: 354 SHPWVREGGDAS 365
+H + E D +
Sbjct: 302 AHSFFDELRDPN 313
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 135 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTA 191
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 192 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 251
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 252 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 129 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 127 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 135/288 (46%), Gaps = 40/288 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQMLRVAAECHLHGL 220
+ +N +Y+ E D S T ++ + Q+L+ A CH H +
Sbjct: 72 DVIHTENKLYLVFEFLHQ----DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 127
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKS 277
+HRD+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 LHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYY 184
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR--- 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 244
Query: 321 --------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 127 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 127 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 127 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 183
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 129 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 185
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 12 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 70 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 128
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 129 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 185
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 186 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 245
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 246 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 290
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 130 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 72
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 132 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 188
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 189 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 248
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 15 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 72
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 73 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 131
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 132 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 188
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 189 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 248
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 249 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 131 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 13 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 70
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 71 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 129
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 130 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 186
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 187 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 246
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 247 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 291
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 72 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 130
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 131 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTA 187
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 188 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 247
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 248 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 135/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK D+GL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 18 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 76 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 134
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 135 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 191
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 192 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 251
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 252 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 296
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/292 (29%), Positives = 129/292 (44%), Gaps = 45/292 (15%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKI 149
+RY LG GQF Y A DK VA+KKI E I A+ RE+K+
Sbjct: 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL----REIKL 65
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
LQ L+ H N++ +AF + + + + E L+ I+ T + L
Sbjct: 66 LQELS-HPNIIGLLDAFGHKSNISLVFDFMETD--LEVIIKDNSLVLTPSHIKAYMLMTL 122
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYV 268
+ H H ++HRD+KP N L E+ LK DFGL+ F P + + V + +Y
Sbjct: 123 QGLEYLHQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYR 179
Query: 269 APEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----GIFKEV--------- 312
APE+L R G D+W++G I LL R PF D IF+ +
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238
Query: 313 -LRNKPDFRR-KPWPSI---------SNSAKDFVKKLLVKDPRARLTAAQAL 353
+ + PD+ K +P I + D ++ L + +P AR+TA QAL
Sbjct: 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 11/250 (4%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG ++ K + AVK ++K+ +I VE E ++L + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
++ F+ + +Y ME GG+L+ I ++ R+ E A ++ G+++
Sbjct: 408 HSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 465
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
RD+K +N + S + +K DFG+ + I G + G+ Y+APE++ + G
Sbjct: 466 RDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 522
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K L+
Sbjct: 523 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMT 578
Query: 341 KDPRARLTAA 350
K P RL
Sbjct: 579 KHPGKRLGCG 588
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 126/296 (42%), Gaps = 43/296 (14%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKI---EKNKMILPIAVEDVKREVKILQALAGHENV 159
L+G G +G +K G VA+KK + +KM+ IA+ RE+K+L+ L HEN+
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAM----REIKLLKQLR-HENL 86
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V + Y+ E + L D L Y + Q++ CH H
Sbjct: 87 VNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLF--QIINGIGFCHSHN 144
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRK 276
++HRD+KPEN L + +K DFG + PG+ + D V + +Y APE+L K
Sbjct: 145 IIHRDIKPENIL---VSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVK 201
Query: 277 SGPESDVWSIGVITYILLCGRRPF-WDKTEDGIF-------------KEVLRNKPDF--- 319
G DVW+IG + + G F D D ++ +E+ P F
Sbjct: 202 YGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGV 261
Query: 320 ------RRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 365
R+P +P +S D KK L DP R A+ L H + + G A
Sbjct: 262 RLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAE 317
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 139/290 (47%), Gaps = 44/290 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 14 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV---VRQMLRVAAECHLH 218
+ +N +Y+ E +D+ L K S T ++ + Q+L+ A CH H
Sbjct: 72 DVIHTENKLYLVFEH------VDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 125
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--R 275
++HRD+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 126 RVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR- 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKP 242
Query: 321 ----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 243 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 292
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 138/321 (42%), Gaps = 65/321 (20%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQA 152
+RY K +G G G A D G VAVKK+ + N+ + RE+ +L+
Sbjct: 22 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT----HAKRAYRELVLLKC 77
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 78 V-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIHMELD----HERMSYLLY 131
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPYVVTRY 188
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDK------TEDGIFKE 311
Y APEV+ E+ D+WS+G I L+ G F W+K T F
Sbjct: 189 YRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMA 248
Query: 312 VLRNKPDFR-----RKPWPSI---------------------SNSAKDFVKKLLVKDPRA 345
L +P R R +P I ++ A+D + K+LV DP
Sbjct: 249 AL--QPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDK 306
Query: 346 RLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D +E
Sbjct: 307 RISVDEALRHPYITVWYDPAE 327
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 135/288 (46%), Gaps = 40/288 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV---VRQMLRVAAECHLHGL 220
+ +N +Y+ E D S T ++ + Q+L+ A CH H +
Sbjct: 68 DVIHTENKLYLVFEHVHQ----DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRV 123
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKS 277
+HRD+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 124 LHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYY 180
Query: 278 GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR--- 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 181 STAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSF 240
Query: 321 --------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 241 PKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+KKI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ + CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 11/250 (4%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG ++ K + AVK ++K+ +I VE E ++L + +
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 86
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
++ F+ + +Y ME GG+L+ I ++ R+ E A ++ G+++
Sbjct: 87 HSCFQTMDRLYFVMEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIY 144
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
RD+K +N + S + +K DFG+ + I G + G+ Y+APE++ + G
Sbjct: 145 RDLKLDNVMLDS---EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKS 201
Query: 281 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W+ GV+ Y +L G+ PF + ED +F+ ++ + + + S+S A K L+
Sbjct: 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMT 257
Query: 341 KDPRARLTAA 350
K P RL
Sbjct: 258 KHPGKRLGCG 267
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 26/285 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 24 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 77
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 78 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 134
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 135 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRS 187
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---NKPDFRRK 322
Y++PE L+ +SD+WS+G+ + GR P + E+L N+P +
Sbjct: 188 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPP-PKL 246
Query: 323 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
P S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 247 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 290
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 138/307 (44%), Gaps = 46/307 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G + D +G ++AVKK+ + + I + RE+++L+ + H
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 109
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 110 ENVIGLLDVFTPATSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 165
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DFGL+ + V + +Y AP
Sbjct: 166 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAP 220
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------------- 314
E++ D+WS+G I LL GR F ++++R
Sbjct: 221 EIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASVISRMP 280
Query: 315 ---------NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P ++ + + + A D ++K+LV D R+TA++AL+HP+ +
Sbjct: 281 SHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQY 340
Query: 362 GDASEIP 368
D + P
Sbjct: 341 HDPDDEP 347
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 16/282 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D + VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+V Y+ E + YI ME +G L D + + T K A V+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYV 268
H +G++HRD+KP N + + +++K DFG++ I + ++G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
+PE + S SDV+S+G + Y +L G PF + D + + +R P +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVREDPIPPSARHEGL 246
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 368
S V K L K+P R A + VR G+ E P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 77
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 78 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 132
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 189
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 190 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 245
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 246 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 305
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 306 AKRISVDDALQHPYINVWYDPAEV 329
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 145/354 (40%), Gaps = 69/354 (19%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 114
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 224
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD
Sbjct: 115 SLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESD 282
+KP N + ED LK DFGL+ + V + +Y APE++ D
Sbjct: 171 LKPSNL---AVNEDCELKILDFGLARHTD--DEMXGXVATRWYRAPEIMLNWMHYNQTVD 225
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRK 322
+WS+G I LL GR F K +LR P +
Sbjct: 226 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 285
Query: 323 PWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P + +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 306
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 307 AKRISVDDALQHPYINVWYDPAEV 330
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 116
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 171
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 228
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 284
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 344
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 345 AKRISVDDALQHPYINVWYDPAEV 368
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 42/291 (14%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ K+ K +++ ++ V+ E +
Sbjct: 20 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVF 74
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVV 205
+ + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+ + ++ +
Sbjct: 75 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 134
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
+ H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 135 NYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGT 184
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLR 314
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 185 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 244
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 359
+ R S+S A +K L KDP+ RL A HP+ R
Sbjct: 245 KQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFR 291
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 145/354 (40%), Gaps = 69/354 (19%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 57 SVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 114
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 224
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD
Sbjct: 115 SLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESD 282
+KP N + ED LK DFGL+ + V + +Y APE++ D
Sbjct: 171 LKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRK 322
+WS+G I LL GR F K +LR P +
Sbjct: 226 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 285
Query: 323 PWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P + +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VYI MEL + L +++ + + + ++
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LDHERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D++LK DFGL+ V + Y
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+GVI ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 71
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD----HERMSYLLY 126
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 239
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 300 AKRISVDDALQHPYINVWYDPAEV 323
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 116
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 117 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 171
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 228
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 284
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 285 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 344
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 345 AKRISVDDALQHPYINVWYDPAEV 368
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 72
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 127
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 240
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 300
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 301 AKRISVDDALQHPYINVWYDPAEV 324
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 306
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 307 AKRISVDDALQHPYINVWYDPAEV 330
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 145/354 (40%), Gaps = 69/354 (19%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 55
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 56 SVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 113
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 224
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD
Sbjct: 114 SLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESD 282
+KP N + ED LK DFGL+ + V + +Y APE++ D
Sbjct: 170 LKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRK 322
+WS+G I LL GR F K +LR P +
Sbjct: 225 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQM 284
Query: 323 PWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P + +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 285 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 338
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 42/291 (14%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ K+ K +++ ++ V+ E +
Sbjct: 5 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVF 59
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVV 205
+ + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+ + ++ +
Sbjct: 60 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 119
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
+ H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 120 NYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGT 169
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLR 314
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 170 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 229
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 359
+ R S+S A +K L KDP+ RL A HP+ R
Sbjct: 230 KQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 276
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 72
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 73 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 127
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 185 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 240
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 241 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 300
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 301 AKRISVDDALQHPYINVWYDPAEV 324
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 71
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 72 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 126
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 183
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 239
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 300 AKRISVDDALQHPYINVWYDPAEV 323
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 126/288 (43%), Gaps = 26/288 (9%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED---VKREVKIL 150
F+ Y +G LLG G FG + + +VA+K I +N+++ + D EV +L
Sbjct: 29 FEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALL 88
Query: 151 Q---ALAGHENVVKFYNAFEDDNYVYIAME-LCEGGELLDRILAKKDSRYTEKDAAVVVR 206
A GH V++ + FE + +E +L D I K E +
Sbjct: 89 WKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFG 146
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
Q++ CH G+VHRD+K EN L + K DFG + + + D G+
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRR--GCAKLIDFGSGALLH-DEPYTDFDGTRV 203
Query: 267 YVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
Y PE + R + VWS+G++ Y ++CG PF D +E+L + F
Sbjct: 204 YSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF---ERD---QEILEAELHFPAH-- 255
Query: 325 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 372
+S +++ L P +R + + L PW++ A ++P++ S
Sbjct: 256 --VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT--PAEDVPLNPS 299
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 306
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 307 AKRISVDDALQHPYINVWYDPAEV 330
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 134
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 247
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 307
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 308 AKRISVDDALQHPYINVWYDPAEV 331
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 79 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 306
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 307 AKRISVDDALQHPYINVWYDPAEV 330
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 129/286 (45%), Gaps = 22/286 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAV-KKIEKNKMILPIAVEDVKREVKILQALAG 155
+Y +G LLG G +G D R AV +K +P +VK+E+++L+ L
Sbjct: 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR- 64
Query: 156 HENVVKFYNAF--EDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H+NV++ + E+ +Y+ ME C G E+LD + K R+ A Q++
Sbjct: 65 HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEK---RFPVCQAHGYFCQLIDG 121
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYV 268
H G+VH+D+KP N L + +LK + G+++ + P + GS +
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTG---GTLKISALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 269 APEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 325
PE+ L SG + D+WS GV Y + G PF +F+ + + P
Sbjct: 179 PPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGP 238
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 371
+S D +K +L +P R + Q H W R+ +E P+ I
Sbjct: 239 PLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKHPPAEAPVPI 280
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 42/291 (14%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ K+ K +++ ++ V+ E +
Sbjct: 9 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMKVVKKELVNDDEDIDWVQTEKHVF 63
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVV 205
+ + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+ + ++ +
Sbjct: 64 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 123
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
+ H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 124 NYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGT 173
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLR 314
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 174 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 233
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 359
+ R S+S A +K L KDP+ RL A HP+ R
Sbjct: 234 KQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 280
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 135/324 (41%), Gaps = 69/324 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 80 CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 134
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 247
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 248 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 307
Query: 344 RARLTAAQALSHPWVREGGDASEI 367
R++ AL HP++ D +E+
Sbjct: 308 AKRISVDDALQHPYINVWYDPAEV 331
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+ KI + + + RE+ +L+ L H N+VK
Sbjct: 11 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 69 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 128 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 184
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 185 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 244
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 245 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 134/285 (47%), Gaps = 34/285 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G Y A +K G+ VA+ KI + + + RE+ +L+ L H N+VK
Sbjct: 10 IGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAI-REISLLKEL-NHPNIVKLL 67
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ +N +Y+ E +L + A + + Q+L+ A CH H ++HR
Sbjct: 68 DVIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHR 126
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPE 280
D+KP+N L + + ++K DFGL+ F P + + V + +Y APE+L +
Sbjct: 127 DLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTA 183
Query: 281 SDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV----LRNKPDFR------ 320
D+WS+G I ++ R F +E D +F+ EV + + PD++
Sbjct: 184 VDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKW 243
Query: 321 -----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
K P + + + ++L DP R++A AL+HP+ ++
Sbjct: 244 ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK FGL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK DF L+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 145/354 (40%), Gaps = 69/354 (19%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 20 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 56
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 57 SVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 114
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 224
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD
Sbjct: 115 SLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 170
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESD 282
+KP N + ED LK DFGL+ + V + +Y APE++ D
Sbjct: 171 LKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVD 225
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRK 322
+WS+G I LL GR F K +LR P +
Sbjct: 226 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 285
Query: 323 PWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P + +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 286 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 339
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VYI MEL + L +++ + + + ++
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LDHERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D++LK DFGL+ V + Y
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+GVI ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 91
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVVVRQMLRVAAECH 216
+Y + D ++YIA+ELC L D + +K S E + ++RQ+ A H
Sbjct: 92 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 217 LHGLVHRDMKPENFLFKSAK----------EDSSLKATDFGLSDFIKPGK-----KFQDI 261
++HRD+KP+N L ++ E+ + +DFGL + G+ +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 262 VGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGRRPFWDK--TEDGIFKEVLR 314
G++ + APE+L KR+ D++S+G V YIL G+ PF DK E I + +
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF- 269
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ + + S+ A D + +++ DP R TA + L HP
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 145/354 (40%), Gaps = 69/354 (19%)
Query: 51 HQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFG 110
H QER Y+Q K + R Q + P G G +G
Sbjct: 19 HMSQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYG 55
Query: 111 YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF---- 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 56 SVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPAR 113
Query: 167 --EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD 224
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD
Sbjct: 114 SLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRD 169
Query: 225 MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESD 282
+KP N + ED LK DFGL+ + V + +Y APE++ D
Sbjct: 170 LKPSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVD 224
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRK 322
+WS+G I LL GR F K +LR P +
Sbjct: 225 IWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM 284
Query: 323 PWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
P + +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 285 PKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 338
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/282 (29%), Positives = 135/282 (47%), Gaps = 36/282 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 39 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 91
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVVVRQMLRVAAECH 216
+Y + D ++YIA+ELC L D + +K S E + ++RQ+ A H
Sbjct: 92 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 150
Query: 217 LHGLVHRDMKPENFLFKSAK----------EDSSLKATDFGLSDFIKPGK-----KFQDI 261
++HRD+KP+N L ++ E+ + +DFGL + G+ +
Sbjct: 151 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 210
Query: 262 VGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGRRPFWDK--TEDGIFKEVLR 314
G++ + APE+L KR+ D++S+G V YIL G+ PF DK E I + +
Sbjct: 211 SGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF- 269
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ + + S+ A D + +++ DP R TA + L HP
Sbjct: 270 SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 311
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 140/291 (48%), Gaps = 42/291 (14%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIA-VEDVKREVKIL 150
+DFD + +++G G + + K DR+ ++ K +++ ++ V+ E +
Sbjct: 52 QDFD----LLRVIGRGSYAKVLLVRLKKT-DRIYAMRVVKKELVNDDEDIDWVQTEKHVF 106
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELL-----DRILAKKDSRYTEKDAAVVV 205
+ + H +V ++ F+ ++ ++ +E GG+L+ R L ++ +R+ + ++ +
Sbjct: 107 EQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLAL 166
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 264
+ H G+++RD+K +N L S + +K TD+G+ + ++PG G+
Sbjct: 167 NYL-------HERGIIYRDLKLDNVLLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGT 216
Query: 265 AYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLR 314
Y+APE+L+ + G D W++GV+ + ++ GR PF TED +F+ +L
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276
Query: 315 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 359
+ R S+S A +K L KDP+ RL A HP+ R
Sbjct: 277 KQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFR 323
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 22/275 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ I K++G G F V K G A+K + K M+ V + E +L
Sbjct: 63 FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN-GDRR 121
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + + AF+D+NY+Y+ ME GG+LL +L+K R + A + +++ H
Sbjct: 122 WITQLHFAFQDENYLYLVMEYYVGGDLL-TLLSKFGERIPAEMARFYLAEIVMAIDSVHR 180
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--VGSAYYVAPEVLK- 274
G VHRD+KP+N L ++ DFG ++ + + VG+ Y++PE+L+
Sbjct: 181 LGYVHRDIKPDNILLDRC---GHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQA 237
Query: 275 -------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW--P 325
GPE D W++GV Y + G+ PF+ + + +++ K + P
Sbjct: 238 VGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK-EHLSLPLVDE 296
Query: 326 SISNSAKDFVKKLLVKDPRARL---TAAQALSHPW 357
+ A+DF+++LL P RL A +HP+
Sbjct: 297 GVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 46/300 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D G +VA+KK+ + + + RE+++L+ + HENV+
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELRLLKHMR-HENVIGLL 90
Query: 164 NAFEDDNYV------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ F D + Y+ M G L +++ K + E +V QML+ H
Sbjct: 91 DVFTPDETLDDFTDFYLVMPFM--GTDLGKLM--KHEKLGEDRIQFLVYQMLKGLRYIHA 146
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-- 275
G++HRD+KP N + ED LK DFGL+ + + V + +Y APEV+
Sbjct: 147 AGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QADSEMXGXVVTRWYRAPEVILNWM 201
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------------- 314
+ D+WS+G I ++ G+ F KE+++
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY 261
Query: 315 --NKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
P+ +K + SI +A + ++K+LV D R+TA +AL+HP+ D + P
Sbjct: 262 MKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEP 321
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 138/320 (43%), Gaps = 63/320 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEK---NKMILPIAVEDVKREVKILQA 152
+RY K +G G G A D G VAVKK+ + N+ + RE+ +L+
Sbjct: 24 KRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQT----HAKRAYRELVLLKC 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 80 V-NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIHMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRY 190
Query: 267 YVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI--------- 308
Y APEV L D+WS+G I L+ G F W+K + +
Sbjct: 191 YRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAEFMA 250
Query: 309 -FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKKLLVKDPRAR 346
+ +RN + R K +P I ++ A+D + K+LV DP R
Sbjct: 251 ALQPTVRNYVENRPK-YPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPDKR 309
Query: 347 LTAAQALSHPWVREGGDASE 366
++ +AL HP++ D +E
Sbjct: 310 ISVDEALRHPYITVWYDPAE 329
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 122/277 (44%), Gaps = 32/277 (11%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV----KREV 147
K + RY I LG G Y+A D +VA+K I I P E+ +REV
Sbjct: 7 KIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAI----FIPPREKEETLKRFEREV 62
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV-- 205
L+ H+N+V + E+D+ Y+ ME EG L S Y E + V
Sbjct: 63 HNSSQLS-HQNIVSMIDVDEEDDCYYLVMEYIEGPTL---------SEYIESHGPLSVDT 112
Query: 206 -----RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
Q+L H +VHRD+KP+N L S K +LK DFG++ + Q
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLTQT 169
Query: 261 --IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNK 316
++G+ Y +PE K ++ E +D++SIG++ Y +L G PF +T I K + +
Sbjct: 170 NHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSV 229
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
P+ I S + + + KD R Q +
Sbjct: 230 PNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK D GL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 135/323 (41%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++C + F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
F +K P++ N A+D + K+LV D
Sbjct: 247 AFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 137/284 (48%), Gaps = 28/284 (9%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 8 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 61
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 62 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 118
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + + + VG+
Sbjct: 119 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DEMANEFVGTRS 171
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFK--EVLRNKPDFRRKP 323
Y++PE L+ +SD+WS+G+ + GR P + IF+ + + N+P + P
Sbjct: 172 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---RPPMAIFELLDYIVNEPP-PKLP 227
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 228 SAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 270
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK D GL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 134/308 (43%), Gaps = 46/308 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G G +G A D G RVAVKK+ + + I + RE+++L+ + H
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-H 80
Query: 157 ENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
ENV+ + F E+ N VY+ L G L+ I+ K + T+ ++ Q+LR
Sbjct: 81 ENVIGLLDVFTPARSLEEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILR 136
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
H ++HRD+KP N + ED LK D GL+ + V + +Y AP
Sbjct: 137 GLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLARHTD--DEMTGYVATRWYRAP 191
Query: 271 EVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP--------- 317
E++ D+WS+G I LL GR F K +LR P
Sbjct: 192 EIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS 251
Query: 318 ---------DFRRKPWPSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREG 361
+ P + +N A D ++K+LV D R+TAAQAL+H + +
Sbjct: 252 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQY 311
Query: 362 GDASEIPI 369
D + P+
Sbjct: 312 HDPDDEPV 319
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 137/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ + V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPEVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++C + F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 136/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 83
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 84 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 138
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 195
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++C + F W+K + +++ P
Sbjct: 196 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQLGTPCP 251
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 252 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 311
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 312 SKRISVDEALQHPYINVWYDPSE 334
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 136/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 72
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 73 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 127
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 184
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++C + F W+K + +++ P
Sbjct: 185 YRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQLGTPCP 240
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 241 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 300
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 301 SKRISVDEALQHPYINVWYDPSE 323
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 73
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVVVRQMLRVAAECH 216
+Y + D ++YIA+ELC L D + +K S E + ++RQ+ A H
Sbjct: 74 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 217 LHGLVHRDMKPENFLFKSAK----------EDSSLKATDFGLSDFIKPGK-----KFQDI 261
++HRD+KP+N L ++ E+ + +DFGL + G+ +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 262 VGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPFWDK--TEDGIFK 310
G++ + APE+L KR+ D++S+G V YIL G+ PF DK E I +
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ + + + S+ A D + +++ DP R TA + L HP
Sbjct: 253 GIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 135/286 (47%), Gaps = 40/286 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K+LG+G G T V G VAVK++ + IA+ E+K+L H NV++
Sbjct: 21 KILGYGSSG-TVVFQGSFQGRPVAVKRMLID--FCDIAL----MEIKLLTESDDHPNVIR 73
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT-----EKDAAVVVRQMLRVAAECH 216
+Y + D ++YIA+ELC L D + +K S E + ++RQ+ A H
Sbjct: 74 YYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH 132
Query: 217 LHGLVHRDMKPENFLFKSAK----------EDSSLKATDFGLSDFIKPGK-----KFQDI 261
++HRD+KP+N L ++ E+ + +DFGL + G+ +
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNP 192
Query: 262 VGSAYYVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPFWDK--TEDGIFK 310
G++ + APE+L KR+ D++S+G V YIL G+ PF DK E I +
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 311 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
+ + + + S+ A D + +++ DP R TA + L HP
Sbjct: 253 GIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 128 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXX 181
Query: 258 F---QDIVGSAYYVAPEVLKRKSGPES------------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K S DVWS+G I Y + G+ PF
Sbjct: 182 XVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 240
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 241 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 139/337 (41%), Gaps = 51/337 (15%)
Query: 74 RRQTGV---IPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE 130
RR GV +P G D RYT + +G G +G A D RVA+KKI
Sbjct: 18 RRTEGVGPGVPGEVEMVKGQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS 77
Query: 131 KNKMILPIAVEDVKREVKILQALAGHENVVKF-----YNAFEDDNYVYIAMELCEGGELL 185
+ + RE++IL HENV+ + E VYI +L E L
Sbjct: 78 PFEH--QTYCQRTLREIQILLRFR-HENVIGIRDILRASTLEAMRDVYIVQDLMETD--L 132
Query: 186 DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
++L K + + + Q+LR H ++HRD+KP N L + LK D
Sbjct: 133 YKLL--KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT---CDLKICD 187
Query: 246 FGLSDFIKPGKK----FQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGRRP 299
FGL+ P + V + +Y APE++ G D+WS+G I +L R
Sbjct: 188 FGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 247
Query: 300 F-----WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAK 332
F D+ GI + L++ P + W P + A
Sbjct: 248 FPGKHYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKAL 307
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
D + ++L +P R+T +AL+HP++ + D ++ P+
Sbjct: 308 DLLDRMLTFNPNKRITVEEALAHPYLEQYYDPTDEPV 344
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VYI MEL + L +++ + + + ++
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LDHERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D++LK DFGL+ V + Y
Sbjct: 134 QMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 127
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 128 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 181
Query: 258 F---QDIVGSAYYVAPEVLKRKSGPES------------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K S DVWS+G I Y + G+ PF
Sbjct: 182 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 240
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 241 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 50 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 108
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 109 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 162
Query: 258 F---QDIVGSAYYVAPEVLKRKSGPES------------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K S DVWS+G I Y + G+ PF
Sbjct: 163 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 221
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 222 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+ H+N++ N F E+ VYI MEL + L +++ + + + ++
Sbjct: 79 VVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LDHERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D++LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 16/282 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D + VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+V Y+ E + YI ME +G L D + + T K A V+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYV 268
H +G++HRD+KP N L + +++K DFG++ I + ++G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANILISAT---NAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYL 186
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
+PE + S SDV+S+G + Y +L G PF + + + +R P +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 368
S V K L K+P R A + VR G+ E P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 104 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 159
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 160 PSNL---AVNEDCELKILDFGLAR--HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 122/267 (45%), Gaps = 23/267 (8%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LGHG G T V + VAVK+I LP REV++L+ H NV+++
Sbjct: 31 VLGHGAEG-TIVYRGMFDNRDVAVKRI------LPECFSFADREVQLLRESDEHPNVIRY 83
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
+ +D + YIA+ELC L + +KD + + +++Q A H +VH
Sbjct: 84 FCTEKDRQFQYIAIELC--AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVH 141
Query: 223 RDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR- 275
RD+KP N L +KA +DFGL + G+ + + G+ ++APE+L
Sbjct: 142 RDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSED 201
Query: 276 -KSGP--ESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR-RKPWPSISNS 330
K P D++S G + Y ++ G PF + +L P
Sbjct: 202 CKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQ--ANILLGACSLDCLHPEKHEDVI 259
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPW 357
A++ ++K++ DP+ R +A L HP+
Sbjct: 260 ARELIEKMIAMDPQKRPSAKHVLKHPF 286
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/291 (30%), Positives = 137/291 (47%), Gaps = 32/291 (10%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 115
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 116 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRS 168
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF--WDKTED-----GIFK--EVLRNK 316
Y++PE L+ +SD+WS+G+ + GR P D ED IF+ + + N+
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNE 228
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
P + P S +DFV K L+K+P R Q + H +++ DA E+
Sbjct: 229 PP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 277
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 104 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 159
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 160 PSNL---AVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 53 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 111
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 112 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 165
Query: 258 F---QDIVGSAYYVAPEVLKRKSGPES------------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K S DVWS+G I Y + G+ PF
Sbjct: 166 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 224
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 225 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 104 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 159
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 160 PSNL---AVNEDCELKILDFGLARHT--ADEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 131/315 (41%), Gaps = 69/315 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 306
Query: 344 RARLTAAQALSHPWV 358
R++ AL HP++
Sbjct: 307 AKRISVDDALQHPYI 321
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 137/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L +++ + + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LDHERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D++LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 155
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 156 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 209
Query: 258 F---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K R++G DVWS+G I Y + G+ PF
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 268
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 269 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 49 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 107
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 108 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 161
Query: 258 F---QDIVGSAYYVAPEVLKRKSGPES------------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K S DVWS+G I Y + G+ PF
Sbjct: 162 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 220
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 221 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 111/238 (46%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 155
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 156 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 209
Query: 258 F---QDIVGSAYYVAPEVLKRKSGPES------------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K S DVWS+G I Y + G+ PF
Sbjct: 210 SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 268
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 269 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 26/238 (10%)
Query: 139 AVEDVKREVKILQALAGHEN-VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
++ + E+ L L H + +++ Y+ D Y+Y+ ME C +L + KK
Sbjct: 97 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPW 155
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
E+ + + ML H HG+VH D+KP NFL D LK DFG+++ ++P
Sbjct: 156 ERKS--YWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTT 209
Query: 258 F---QDIVGSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWD 302
VG+ Y+ PE +K R++G DVWS+G I Y + G+ PF
Sbjct: 210 SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-Q 268
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISN-SAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ + I K P+ + +P I +D +K L +DP+ R++ + L+HP+V+
Sbjct: 269 QIINQISKLHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 145/352 (41%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P +G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSP----------------------IGSGAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 44 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 101
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 102 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 157
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 158 PSNL---AVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 9 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 45
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 46 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 103
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 104 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 159
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 160 PSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 214
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 215 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 274
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 326
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 29/304 (9%)
Query: 70 KTNSRRQTGVIPC----GKRTDFGYDKD-FDRRYTIGKLLGHGQFGYTYVATDKANGDRV 124
K NS PC + G +K+ + +Y +G LLG G G Y ++ V
Sbjct: 20 KINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGSGSVYSGIRVSDNLPV 79
Query: 125 AVKKIEKNKMI----LPIAVEDVKREVKILQALA-GHENVVKFYNAFE-DDNYVYIAMEL 178
A+K +EK+++ LP V EV +L+ ++ G V++ + FE D++V I
Sbjct: 80 AIKHVEKDRISDWGELPNGTR-VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERP 138
Query: 179 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 238
+L D I + E+ A Q+L CH G++HRD+K EN L +
Sbjct: 139 EPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR-- 194
Query: 239 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG 296
LK DFG +K + D G+ Y PE ++ R G + VWS+G++ Y ++CG
Sbjct: 195 GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
Query: 297 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 356
PF +E++R + FR++ +S+ + ++ L P R T + +HP
Sbjct: 254 DIPFEHD------EEIIRGQVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHP 303
Query: 357 WVRE 360
W+++
Sbjct: 304 WMQD 307
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 44 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 101
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 102 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 157
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 158 PSNL---AVNEDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 16/282 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D + VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+V Y+ E + YI ME +G L D + + T K A V+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYV 268
H +G++HRD+KP N + + +++K DFG++ I + ++G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
+PE + S SDV+S+G + Y +L G PF + + + +R P +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 368
S V K L K+P R A + VR G+ E P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 144/352 (40%), Gaps = 69/352 (19%)
Query: 53 HQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT 112
QER Y+Q K + R Q + P G G +G
Sbjct: 7 SQERPTFYRQELNKTIWEVPERYQ-NLSPVGS----------------------GAYGSV 43
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAF------ 166
A D G RVAVKK+ + + I + RE+++L+ + HENV+ + F
Sbjct: 44 CAAFDTKTGLRVAVKKLSRPFQSI-IHAKRTYRELRLLKHMK-HENVIGLLDVFTPARSL 101
Query: 167 EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 226
E+ N VY+ L G L+ I+ K + T+ ++ Q+LR H ++HRD+K
Sbjct: 102 EEFNDVYLVTHLM--GADLNNIV--KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLK 157
Query: 227 PENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVW 284
P N + ED LK DFGL+ + V + +Y APE++ D+W
Sbjct: 158 PSNL---AVNEDXELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 212
Query: 285 SIGVITYILLCGRRPFWDKTEDGIFKEVLR--NKP------------------DFRRKPW 324
S+G I LL GR F K +LR P + P
Sbjct: 213 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPK 272
Query: 325 PSISNS-------AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 369
+ +N A D ++K+LV D R+TAAQAL+H + + D + P+
Sbjct: 273 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPV 324
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 133/322 (41%), Gaps = 69/322 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VY+ MEL + L I + D + + ++
Sbjct: 79 XVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN-LXQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I IL GR W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 343
+F +K P++ N A+D + K+LV DP
Sbjct: 247 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 306
Query: 344 RARLTAAQALSHPWVREGGDAS 365
R++ AL HP++ D +
Sbjct: 307 AKRISVDDALQHPYINVWYDPA 328
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 136/323 (42%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L +++ + + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN--LSQVIQME---LDHERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPSP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 134/298 (44%), Gaps = 47/298 (15%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
YT K++G+G FG + A D VA+KK+ ++K RE++I++ + H
Sbjct: 42 YTNCKVIGNGSFGVVFQA-KLVESDEVAIKKVLQDKRF-------KNRELQIMR-IVKHP 92
Query: 158 NVVK----FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR----QML 209
NVV FY+ + + V++ + L E + R ++ ++ + ++++ Q+L
Sbjct: 93 NVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRA-SRHYAKLKQTMPMLLIKLYMYQLL 151
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
R A H G+ HRD+KP+N L LK DFG + + G+ + S YY A
Sbjct: 152 RSLAYIHSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPNVSXICSRYYRA 209
Query: 270 PEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR------------- 314
PE++ + + D+WS G + L+ G+ F ++ E+++
Sbjct: 210 PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTM 269
Query: 315 -------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P R P+ P A D + +LL P ARLTA +AL HP+ E
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDE 327
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 125/261 (47%), Gaps = 22/261 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG Y D + VA+K I+ + +ED+++E+ +L + +++
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQ-CDSPYITRYF 83
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
++ ++I ME GG LD + K E A ++R++L+ H +HR
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLL---KPGPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGP-ES 281
D+K N L E +K DFG++ + + K VG+ +++APEV+K+ + ++
Sbjct: 141 DIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKA 197
Query: 282 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKK 337
D+WS+G+ L G P D + + +N P P++ S K+FV+
Sbjct: 198 DIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP-------PTLEGQHSKPFKEFVEA 250
Query: 338 LLVKDPRARLTAAQALSHPWV 358
L KDPR R TA + L H ++
Sbjct: 251 CLNKDPRFRPTAKELLKHKFI 271
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 80
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 81 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 135
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPFVVTRY 192
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 193 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPCP 248
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 249 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 308
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 309 SKRISVDEALQHPYINVWYDPSE 331
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 79
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 80 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 134
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 191
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPCP 247
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 308 SKRISVDEALQHPYINVWYDPSE 330
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 63/338 (18%)
Query: 92 KDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK---REVK 148
K+ DR + + ++ G G FG + +K+ G VA+KK+ ++D + RE++
Sbjct: 20 KEMDR-FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKV----------IQDPRFRNRELQ 68
Query: 149 ILQALA--GHENVVK----FYNAFEDDN---YVYIAMELCEGGELLDRILAKKDSRYTEK 199
I+Q LA H N+V+ FY E D Y+ + ME + L R R
Sbjct: 69 IMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAP 126
Query: 200 DAAVV---VRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
++ + Q++R HL + HRD+KP N L A D +LK DFG + + P
Sbjct: 127 PPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSP 184
Query: 255 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
+ + S YY APE++ + D+WS+G I ++ G F G E+
Sbjct: 185 SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
Query: 313 LR----NKPDFRRK----------------PWPSI--------SNSAKDFVKKLLVKDPR 344
+R + RK PW ++ + A D + LL P
Sbjct: 245 VRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPE 304
Query: 345 ARLTAAQALSHPWVREGGD-ASEIPIDISVLNNMRQFV 381
R+ +AL HP+ E D A+++P + + ++ +F+
Sbjct: 305 ERMKPYEALCHPYFDELHDPATKLPNNKDLPEDLFRFL 342
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 19 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 76
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 77 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGL 132
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 133 DYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 189
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+K+ + ++D+WS+G+ L G P + + + +N P + S
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKP 246
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358
K+FV+ L K+P R TA + L H ++
Sbjct: 247 LKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 61
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 62 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGL 117
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 118 DYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 174
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+K+ + ++D+WS+G+ L G P + + + +N P + S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKP 231
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358
K+FV+ L K+P R TA + L H ++
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 4 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 61
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 62 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGL 117
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 118 DYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 174
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+K+ + ++D+WS+G+ L G P + + + +N P + S
Sbjct: 175 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEG---NYSKP 231
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358
K+FV+ L K+P R TA + L H ++
Sbjct: 232 LKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 135/323 (41%), Gaps = 69/323 (21%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED-VKREVK--ILQA 152
+RY K +G G G A D VA+KK+ + P + KR + +L
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-----PFQNQTHAKRAYRELVLMK 78
Query: 153 LAGHENVVKFYNAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
H+N++ N F E+ VYI MEL + L I + D + + ++
Sbjct: 79 CVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-LCQVIQMELD----HERMSYLLY 133
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
QML H G++HRD+KP N + KS D +LK DFGL+ V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPEVVTRY 190
Query: 267 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEVLRNKP 317
Y APEV+ E+ D+WS+G I ++ G F W+K + +++ P
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQLGTPCP 246
Query: 318 DFRRKPWPSI----------------------------------SNSAKDFVKKLLVKDP 343
+F +K P++ ++ A+D + K+LV D
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDA 306
Query: 344 RARLTAAQALSHPWVREGGDASE 366
R++ +AL HP++ D SE
Sbjct: 307 SKRISVDEALQHPYINVWYDPSE 329
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 20/237 (8%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 11 DGQITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 65
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L + A ++++ K + RQ R
Sbjct: 66 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDY 123
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED+++K DFGL+ +F+ + GS ++APE
Sbjct: 124 LHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 180
Query: 272 VLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFRR 321
V++ + S P +SDV++ G++ Y L+ G+ P+ + D I + V R PD +
Sbjct: 181 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 237
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 16/282 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+V Y+ E + YI ME +G L D + + T K A V+ +
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYV 268
H +G++HRD+KP N + + +++K DFG++ I + ++G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
+PE + S SDV+S+G + Y +L G PF + + + +R P +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 368
S V K L K+P R A + VR G+ E P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 127/268 (47%), Gaps = 14/268 (5%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 24 DPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE--DEIEDIQQEITVLSQ 81
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ D ++I ME GG LD + + E A ++R++L+
Sbjct: 82 -CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILKGL 137
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 138 DYLHSEKKIHRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 194
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
V+K+ + ++D+WS+G+ L G P + + + +N P + S
Sbjct: 195 VIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKP 251
Query: 331 AKDFVKKLLVKDPRARLTAAQALSHPWV 358
K+FV+ L K+P R TA + L H ++
Sbjct: 252 LKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 144/349 (41%), Gaps = 95/349 (27%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGH 156
Y I L+G G +GY Y+A DK VA+KK+ N+M I + + RE+ IL L
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRILREITILNRLKS- 84
Query: 157 ENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ +++ Y+ D+ +YI +E+ + + L K TE+ ++ +L
Sbjct: 85 DYIIRLYDLIIPDDLLKFDELYIVLEIADSDL---KKLFKTPIFLTEEHIKTILYNLLLG 141
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI----------------KPG 255
H G++HRD+KP N L +D S+K DFGL+ I +PG
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 256 -------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITYILL----------CG 296
K+ V + +Y APE +L+ D+WS G I LL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 297 RRPFW----------DKTEDGIFKEVLR---------------------NKPDF------ 319
R P + D+ + ++ R NKP+
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKL 318
Query: 320 --RRKP------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
RKP +PSIS+ + ++ +L +P R+T QAL HP++++
Sbjct: 319 FPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 46/300 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D +VAVKK+ + L I RE+++L+ L HENV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHLK-HENVIGLL 93
Query: 164 NAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ F ED + VY+ L G L+ I+ K +++ +V Q+LR H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIV--KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-- 275
G++HRD+KP N + EDS L+ DFGL+ + ++ V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL---------------------- 313
D+WS+G I LL G+ F K ++
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 314 -RNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
++ P +K SI A D + ++LV D R++AA+AL+H + + D + P
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 124/291 (42%), Gaps = 17/291 (5%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
G++P G RY +G++LG G ++A D VAVK + + P
Sbjct: 13 GLVPRGSH--MTTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDP 70
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKD 193
+RE + AL H +V Y+ E + YI ME +G L D + +
Sbjct: 71 SFYLRFRREAQNAAAL-NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRD--IVHTE 127
Query: 194 SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK 253
T K A V+ + H +G++HRD+KP N + + +++K DFG++ I
Sbjct: 128 GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIA 184
Query: 254 PG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
+ ++G+A Y++PE + S SDV+S+G + Y +L G PF + +
Sbjct: 185 DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV 244
Query: 309 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 359
+ +R P +S V K L K+P R A + VR
Sbjct: 245 AYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 295
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 20/237 (8%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 23 DGQITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRKTR 78
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L + A ++++ K + RQ R
Sbjct: 79 -HVNILLFM-GYSTKPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDY 135
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED+++K DFGL+ +F+ + GS ++APE
Sbjct: 136 LHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 272 VLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFRR 321
V++ + S P +SDV++ G++ Y L+ G+ P+ + D I + V R PD +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 16/282 (5%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G++LG G ++A D VAVK + + P +RE + AL H
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAAL-NH 71
Query: 157 ENVVKFYNAFEDDNYV----YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+V Y E + YI ME +G L D + + T K A V+ +
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRD--IVHTEGPMTPKRAIEVIADACQAL 129
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYV 268
H +G++HRD+KP N + + +++K DFG++ I + ++G+A Y+
Sbjct: 130 NFSHQNGIIHRDVKPANIMISAT---NAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYL 186
Query: 269 APEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI 327
+PE + S SDV+S+G + Y +L G PF + + + +R P +
Sbjct: 187 SPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL 246
Query: 328 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-EGGDASEIP 368
S V K L K+P R A + VR G+ E P
Sbjct: 247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNGEPPEAP 288
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 116/237 (48%), Gaps = 20/237 (8%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 23 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 77
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L + A ++++ K + RQ R
Sbjct: 78 RHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDY 135
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED+++K DFGL+ +F+ + GS ++APE
Sbjct: 136 LHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 192
Query: 272 VLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFRR 321
V++ + S P +SDV++ G++ Y L+ G+ P+ + D I + V R PD +
Sbjct: 193 VIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSK 249
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G + A ++ + VA+K++ + + +P RE+ +L+ L H+N+V+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELK-HKNIVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVV---VRQMLRVAAECHL 217
++ D + + E C D+ L K DS + D +V + Q+L+ CH
Sbjct: 66 LHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--K 274
++HRD+KP+N L E LK DFGL+ F P + + V + +Y P+VL
Sbjct: 120 RNVLHRDLKPQNLLINRNGE---LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 275 RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR--------------NKPDF 319
+ D+WS G I L RP + + D K + R PD+
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 320 RRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ P P ++ + +D ++ LL +P R++A +AL HP+ +
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 133/300 (44%), Gaps = 46/300 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D +VAVKK+ + L I RE+++L+ L HENV+
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHLK-HENVIGLL 93
Query: 164 NAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ F ED + VY+ L G L+ I+ K +++ +V Q+LR H
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLM--GADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-- 275
G++HRD+KP N + EDS L+ DFGL+ + ++ V + +Y APE++
Sbjct: 150 AGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 204
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL---------------------- 313
D+WS+G I LL G+ F K ++
Sbjct: 205 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 264
Query: 314 -RNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
++ P +K SI A D + ++LV D R++AA+AL+H + + D + P
Sbjct: 265 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 324
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 81
Query: 162 F----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAVVVRQML 209
YN + +Y+ + CE LL +L K +T + V++ +L
Sbjct: 82 LIEICRTKASPYNRCKGS--IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLL 135
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGS 264
H + ++HRDMK N L D LK DFGL+ K ++ + V +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
+Y PE+L +R GP D+W G I + TE + + +
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 323 PWPSISN----------------------------SAKDFVKKLLVKDPRARLTAAQALS 354
WP++ N A D + KLLV DP R+ + AL+
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 355 H 355
H
Sbjct: 313 H 313
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 130/272 (47%), Gaps = 22/272 (8%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
D + +T + +G G FG + D VA+K I+ + +ED+++E+ +L
Sbjct: 20 DPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQEITVLSQ 77
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
V K+Y ++ + ++I ME GG LD + A + E A +++++L+
Sbjct: 78 -CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGL 133
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPE 271
H +HRD+K N L E +K DFG++ + + K VG+ +++APE
Sbjct: 134 DYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 190
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI--- 327
V+++ + ++D+WS+G+ L G P D + + +N P P++
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP-------PTLVGD 243
Query: 328 -SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ S K+F+ L KDP R TA + L H ++
Sbjct: 244 FTKSFKEFIDACLNKDPSFRPTAKELLKHKFI 275
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 80
Query: 162 F----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAVVVRQML 209
YN + +Y+ + CE LL +L K +T + V++ +L
Sbjct: 81 LIEICRTKASPYNRCKGS--IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLL 134
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGS 264
H + ++HRDMK N L D LK DFGL+ K ++ + V +
Sbjct: 135 NGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 191
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
+Y PE+L +R GP D+W G I + TE + + +
Sbjct: 192 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 251
Query: 323 PWPSISN----------------------------SAKDFVKKLLVKDPRARLTAAQALS 354
WP++ N A D + KLLV DP R+ + AL+
Sbjct: 252 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311
Query: 355 H 355
H
Sbjct: 312 H 312
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 81
Query: 162 F----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAVVVRQML 209
YN + +Y+ + CE LL +L K +T + V++ +L
Sbjct: 82 LIEICRTKASPYNRCKGS--IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLL 135
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGS 264
H + ++HRDMK N L D LK DFGL+ K ++ + V +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
+Y PE+L +R GP D+W G I + TE + + +
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 323 PWPSISN----------------------------SAKDFVKKLLVKDPRARLTAAQALS 354
WP++ N A D + KLLV DP R+ + AL+
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 355 H 355
H
Sbjct: 313 H 313
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 122/301 (40%), Gaps = 62/301 (20%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G FG + A + G +VA+KK+ E K PI RE+KILQ L HENVV
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT---ALREIKILQLLK-HENVVN 81
Query: 162 F----------YNAFEDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAAVVVRQML 209
YN + +Y+ + CE LL +L K +T + V++ +L
Sbjct: 82 LIEICRTKASPYNRCKAS--IYLVFDFCEHDLAGLLSNVLVK----FTLSEIKRVMQMLL 135
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGS 264
H + ++HRDMK N L D LK DFGL+ K ++ + V +
Sbjct: 136 NGLYYIHRNKILHRDMKAANVLI---TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVT 192
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 322
+Y PE+L +R GP D+W G I + TE + + +
Sbjct: 193 LWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPE 252
Query: 323 PWPSISN----------------------------SAKDFVKKLLVKDPRARLTAAQALS 354
WP++ N A D + KLLV DP R+ + AL+
Sbjct: 253 VWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 312
Query: 355 H 355
H
Sbjct: 313 H 313
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 48/292 (16%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
+G G +G + A ++ + VA+K++ + + +P RE+ +L+ L H+N+V+
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVP---SSALREICLLKELK-HKNIVR 65
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKK-DSRYTEKDAAVV---VRQMLRVAAECHL 217
++ D + + E C D+ L K DS + D +V + Q+L+ CH
Sbjct: 66 LHDVLHSDKKLTLVFEFC------DQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--K 274
++HRD+KP+N L E LK +FGL+ F P + + V + +Y P+VL
Sbjct: 120 RNVLHRDLKPQNLLINRNGE---LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 275 RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLR--------------NKPDF 319
+ D+WS G I L RP + + D K + R PD+
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDY 236
Query: 320 RRKPW-----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+ P P ++ + +D ++ LL +P R++A +AL HP+ +
Sbjct: 237 KPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 132/300 (44%), Gaps = 46/300 (15%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G +G A D +VAVKK+ + L I RE+++L+ L HENV+
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSL-IHARRTYRELRLLKHLK-HENVIGLL 85
Query: 164 NAF------EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ F ED + VY+ L G L+ I+ K +++ +V Q+LR H
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLM--GADLNNIV--KCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-- 275
G++HRD+KP N + ED L+ DFGL+ + ++ V + +Y APE++
Sbjct: 142 AGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QADEEMTGYVATRWYRAPEIMLNWM 196
Query: 276 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL---------------------- 313
D+WS+G I LL G+ F K ++
Sbjct: 197 HYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPEVLAKISSEHARTY 256
Query: 314 -RNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 368
++ P +K SI A D + ++LV D R++AA+AL+H + + D + P
Sbjct: 257 IQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFSQYHDPEDEP 316
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 10/261 (3%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 248
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
A+E + + + + L GG+L I + + E A ++ + H +V
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K + S
Sbjct: 309 YRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W++G + Y ++ G+ PF + + +EV R + + S A+ +LL
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 341 KDPRARL-----TAAQALSHP 356
KDP RL +A + HP
Sbjct: 426 KDPAERLGCRGGSAREVKEHP 446
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 120/261 (45%), Gaps = 10/261 (3%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG +A G A KK+EK ++ E +IL+ + VV
Sbjct: 190 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV-NSRFVVS 248
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
A+E + + + + L GG+L I + + E A ++ + H +V
Sbjct: 249 LAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIV 308
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES 281
+RD+KPEN L + ++ +D GL+ + G+ + VG+ Y+APEV+K + S
Sbjct: 309 YRDLKPENILL---DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFS 365
Query: 282 -DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 340
D W++G + Y ++ G+ PF + + +EV R + + S A+ +LL
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLC 425
Query: 341 KDPRARL-----TAAQALSHP 356
KDP RL +A + HP
Sbjct: 426 KDPAERLGCRGGSAREVKEHP 446
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 81.6 bits (200), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 47/303 (15%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQ 151
D++Y +G G +G + A D NG R VA+K++ + + +P++ REV +L+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLR 66
Query: 152 ALAG--HENVVKFYNAF-----EDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAA 202
L H NVV+ ++ + + + + E + LD++ T KD
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD-- 124
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V
Sbjct: 125 -MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVV 180
Query: 263 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRN 315
+ +Y APEVL + S D+WS+G I + + R+P + + D G +V L
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 316 KPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ D+ R K I KD + K L +P R++A ALSHP+
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 358 VRE 360
++
Sbjct: 300 FQD 302
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 144/333 (43%), Gaps = 86/333 (25%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK---REVKILQA 152
++Y++GK LG G FG D +G R A+KK+ ++D + RE+ I++
Sbjct: 7 KKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKV----------LQDPRYKNRELDIMKV 56
Query: 153 LAGHENVVKFYNAF--------------EDDN------------------------YVYI 174
L H N++K + F +D N Y+ +
Sbjct: 57 L-DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNV 115
Query: 175 AMELCEGGELLDRILAK--KDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFL 231
ME + L ++L + R + ++ + Q+ R H G+ HRD+KP+N L
Sbjct: 116 IMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLL 173
Query: 232 FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI 289
S +D++LK DFG + + P + + S +Y APE++ + P D+WSIG +
Sbjct: 174 VNS--KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCV 231
Query: 290 TYILLCGRRPFWDKTE-DGIFK-----------EVLRNKPDFRRKPWPSI---------- 327
L+ G+ F +T D + + +++R P + +P++
Sbjct: 232 FGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291
Query: 328 ---SNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ A D ++++L +P R+ +A++HP+
Sbjct: 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPF 324
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 47/303 (15%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQ 151
D++Y +G G +G + A D NG R VA+K++ + + +P++ REV +L+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLR 66
Query: 152 ALAG--HENVVKFYNAF-----EDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAA 202
L H NVV+ ++ + + + + E + LD++ T KD
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD-- 124
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V
Sbjct: 125 -MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVV 180
Query: 263 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRN 315
+ +Y APEVL + S D+WS+G I + + R+P + + D G +V L
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 316 KPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ D+ R K I KD + K L +P R++A ALSHP+
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
Query: 358 VRE 360
++
Sbjct: 300 FQD 302
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 79 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 130
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 309 TALEAMTHPYFQQ 321
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF- 162
LG G FGY + G++VA+K+ + + P E E++I++ L H NVV
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHPNVVSAR 79
Query: 163 -----YNAFEDDNYVYIAMELCEGGELLDRI--------LAKKDSRYTEKDAAVVVRQML 209
++ +AME CEGG+L + L + R D + +R +
Sbjct: 80 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL- 138
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H + ++HRD+KPEN + + + K D G + + G+ + VG+ Y+A
Sbjct: 139 ------HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 192
Query: 270 PEVLKRKSGPES-DVWSIGVITYILLCGRRPF 300
PE+L++K + D WS G + + + G RPF
Sbjct: 193 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF- 162
LG G FGY + G++VA+K+ + + P E E++I++ L H NVV
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKL-NHPNVVSAR 78
Query: 163 -----YNAFEDDNYVYIAMELCEGGELLDRI--------LAKKDSRYTEKDAAVVVRQML 209
++ +AME CEGG+L + L + R D + +R +
Sbjct: 79 EVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYL- 137
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
H + ++HRD+KPEN + + + K D G + + G+ + VG+ Y+A
Sbjct: 138 ------HENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLA 191
Query: 270 PEVLKRKSGPES-DVWSIGVITYILLCGRRPF 300
PE+L++K + D WS G + + + G RPF
Sbjct: 192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 137/300 (45%), Gaps = 47/300 (15%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDR-VAVKKI--EKNKMILPIAVEDVKREVKILQ 151
D++Y +G G +G + A D NG R VA+K++ + + +P++ REV +L+
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLST---IREVAVLR 66
Query: 152 ALAG--HENVVKFYNAF-----EDDNYVYIAMELCEG--GELLDRILAKKDSRYTEKDAA 202
L H NVV+ ++ + + + + E + LD++ T KD
Sbjct: 67 HLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD-- 124
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++ Q+LR H H +VHRD+KP+N L S+ + +K DFGL+ +V
Sbjct: 125 -MMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVV 180
Query: 263 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRN 315
+ +Y APEVL + S D+WS+G I + + R+P + + D G +V L
Sbjct: 181 VTLWYRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 239
Query: 316 KPDFRR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ D+ R K I KD + K L +P R++A ALSHP+
Sbjct: 240 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 299
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 80 ILQNLCGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 131
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 132 YIYELLKALDYCHSQGIMHRDVKPHNVMID--HELRKLRLIDWGLAEFYHPGKEYNVRVA 189
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 190 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 249
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 250 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 309
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 310 TALEAMTHPYFQQ 322
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLMGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 79 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 130
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 131 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 188
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 189 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 248
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 249 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 308
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 309 TALEAMTHPYFQQ 321
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 107/228 (46%), Gaps = 20/228 (8%)
Query: 88 FGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
G + + + +LG G + K GD A+K + P+ V+ RE
Sbjct: 1 MGSQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREF 58
Query: 148 KILQALAGHENVVKFYNAFEDDNYV---YIAMELCEGGELLDRILAKKDSRY--TEKDAA 202
++L+ L H+N+VK + A E++ + ME C G L +L + + Y E +
Sbjct: 59 EVLKKL-NHKNIVKLF-AIEEETTTRHKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFL 115
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQDI 261
+V+R ++ +G+VHR++KP N + ++ S+ K TDFG + ++ ++F +
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSL 175
Query: 262 VGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPF 300
G+ Y+ P++ +R K G D+WSIGV Y G PF
Sbjct: 176 YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 111/236 (47%), Gaps = 46/236 (19%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALAGHEN 158
+ LG G FG + A +K + A+K+I LP +A E V REVK L L H
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIR-----LPNRELAREKVMREVKALAKLE-HPG 64
Query: 159 VVKFYNAFEDDN------------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+V+++NA+ + N Y+YI M+LC L D + + E++ +V +
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLH 122
Query: 207 QMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-- 261
L++A H GL+HRD+KP N F D +K DFGL + ++ Q +
Sbjct: 123 IFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 262 -----------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE 305
VG+ Y++PE + S + D++S+G+I + LL PF + E
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPFSTQME 232
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 111/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 78 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 129
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 130 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 187
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--------- 310
S Y+ PE+L + D+WS+G + ++ + PF+ D + K
Sbjct: 188 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 247
Query: 311 -EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
V NK P RKPW N+ A DF+ KLL D + RL
Sbjct: 248 LNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 307
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 308 TALEAMTHPYFQQ 320
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 123/291 (42%), Gaps = 41/291 (14%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQALAGHENVVK 161
LG G + Y K + VA+K+I E + A+ REV +L+ L H N+V
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAI----REVSLLKDLK-HANIVT 64
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
++ + + + E + L + L + + + + Q+LR A CH ++
Sbjct: 65 LHDIIHTEKSLTLVFEYLDKD--LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS--G 278
HRD+KP+N L E LK DFGL+ P K + + V + +Y P++L +
Sbjct: 123 HRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYS 179
Query: 279 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----------------------NK 316
+ D+W +G I Y + GR F T + + R N
Sbjct: 180 TQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNY 239
Query: 317 PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 363
P +R + P + + D + KLL + R R++A A+ HP+ G+
Sbjct: 240 PKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 112/255 (43%), Gaps = 21/255 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
A + +V I MEL EGG L L K+ E A + Q L H ++H
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 190
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV------GSAYYVAPE-VLKRK 276
D+K +N L S ++L DFG + ++P +D++ G+ ++APE VL R
Sbjct: 191 DVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRS 248
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+ DVWS + +L G P+ + ++ P R P PS + ++
Sbjct: 249 CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQ 307
Query: 337 KLLVKDPRARLTAAQ 351
+ L K+P R++AA+
Sbjct: 308 EGLRKEPIHRVSAAE 322
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 109/253 (43%), Gaps = 51/253 (20%)
Query: 149 ILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR-----YTEKDAAV 203
ILQ L G N+VK + D + + L+ + D + T+ D
Sbjct: 99 ILQNLXGGPNIVKLLDIVRDQH--------SKTPSLIFEYVNNTDFKVLYPTLTDYDIRY 150
Query: 204 VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+ ++L+ CH G++HRD+KP N + E L+ D+GL++F PGK++ V
Sbjct: 151 YIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVA 208
Query: 264 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------------DK 303
S Y+ PE+L + D+WS+G + ++ + PF+ D
Sbjct: 209 SRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDG 268
Query: 304 TEDGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLVKDPRARL 347
+ K + P RKPW N+ A DF+ KLL D + RL
Sbjct: 269 LNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDHQERL 328
Query: 348 TAAQALSHPWVRE 360
TA +A++HP+ ++
Sbjct: 329 TALEAMTHPYFQQ 341
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 20/218 (9%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ + +LG G + K GD A+K + P+ V+ RE ++L+ L H+
Sbjct: 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKL-NHK 67
Query: 158 NVVKFYNAFEDDNYV---YIAMELCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVA 212
N+VK + A E++ + ME C G L +L + + Y E + +V+R ++
Sbjct: 68 NIVKLF-AIEEETTTRHKVLIMEFCPCGSLY-TVLEEPSNAYGLPESEFLIVLRDVVGGM 125
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
+G+VHR++KP N + ++ S+ K TDFG + ++ ++F + G+ Y+ P+
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPD 185
Query: 272 VLKR---------KSGPESDVWSIGVITYILLCGRRPF 300
+ +R K G D+WSIGV Y G PF
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 111/255 (43%), Gaps = 21/255 (8%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
A + +V I MEL EGG L L K+ E A + Q L H ++H
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHG 209
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVGSAYYVAPE-VLKRK 276
D+K +N L S ++L DFG + ++P GK I G+ ++APE VL R
Sbjct: 210 DVKADNVLLSSDGSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRS 267
Query: 277 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+ DVWS + +L G P+ + ++ P R P PS + ++
Sbjct: 268 CDAKVDVWSSCCMMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQ 326
Query: 337 KLLVKDPRARLTAAQ 351
+ L K+P R++AA+
Sbjct: 327 EGLRKEPIHRVSAAE 341
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N L E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 130/307 (42%), Gaps = 61/307 (19%)
Query: 94 FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--EKNKMILPIAVEDVKREVKILQ 151
DR I KL G G +G Y A D + VA+K+I E + +P REV +L+
Sbjct: 33 IDRYRRITKL-GEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVP---GTAIREVSLLK 88
Query: 152 ALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR----- 206
L H N+++ + ++ +++ E E +Y +K+ V +R
Sbjct: 89 ELQ-HRNIIELKSVIHHNHRLHLIFEYAE----------NDLKKYMDKNPDVSMRVIKSF 137
Query: 207 --QMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKKFQDI 261
Q++ CH +HRD+KP+N L A E LK DFGL+ F P ++F
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE 197
Query: 262 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVLRNK 316
+ + +Y PE+L R D+WSI I +L F +E D +FK EVL
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL-GL 256
Query: 317 PDFRRKPWPSIS---NSAKDFVK-----------------------KLLVKDPRARLTAA 350
PD WP ++ + + F K +L DP R++A
Sbjct: 257 PD--DTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAK 314
Query: 351 QALSHPW 357
AL HP+
Sbjct: 315 NALEHPY 321
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 127/291 (43%), Gaps = 51/291 (17%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG A + + A+KKI + L + +V +L A H+ VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-----MLLASLNHQYVVRY 67
Query: 163 YNAF-EDDNYV------------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
Y A+ E N+V +I ME CE G L D I ++ ++ + + + RQ+L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRD-EYWRLFRQIL 126
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK 256
+ H G++HRD+KP N E ++K DFGL+ D +K PG
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 257 --KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
+G+A YVA EVL + D++S+G+I + ++ PF E +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 313 LRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
LR+ PDF K ++ L+ DP R A L+ W+
Sbjct: 241 LRSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 40/306 (13%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-- 129
+S +QTG + G + Y + + +G++ G G G + + G +AVK++
Sbjct: 5 SSGKQTGYLTIGGQR---YQAEINDLENLGEM-GSGTCGQVWKMRFRKTGHVIAVKQMRR 60
Query: 130 ----EKNKMILPIAVEDVKREVKILQALAGHEN--VVKFYNAFEDDNYVYIAMEL---CE 180
E+NK IL + + L H+ +V+ + F + V+IAMEL C
Sbjct: 61 SGNKEENKRIL----------MDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTC- 109
Query: 181 GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
+L R+ R K +V+ + + + HG++HRD+KP N L E
Sbjct: 110 AEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK---HGVIHRDVKPSNILL---DERGQ 163
Query: 241 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPE----SDVWSIGVITYILL 294
+K DFG+S + K G A Y+APE + + P+ +DVWS+G+ L
Sbjct: 164 IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELA 223
Query: 295 CGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
G+ P+ + KT+ + +VL+ +P S + FVK L KD R R + L
Sbjct: 224 TGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGDFQSFVKDCLTKDHRKRPKYNKLL 282
Query: 354 SHPWVR 359
H +++
Sbjct: 283 EHSFIK 288
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 140/325 (43%), Gaps = 56/325 (17%)
Query: 89 GYDKDFD--RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+D FD Y I + +G+G +G A + G +VA+KKI N + + RE
Sbjct: 45 SFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLRE 103
Query: 147 VKILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
+KIL+ H+N++ Y F+ VY+ ++L E L +I+ T
Sbjct: 104 LKILKHFK-HDNIIAIKDILRPTVPYGEFKS---VYVVLDLMESD--LHQIIHSSQP-LT 156
Query: 198 EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPG 255
+ + Q+LR H ++HRD+KP N L E+ LK DFG++ + P
Sbjct: 157 LEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPA 213
Query: 256 KK---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT------ 304
+ + V + +Y APE++ + D+WS+G I +L R+ F K
Sbjct: 214 EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQ 273
Query: 305 ---------EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDP 343
+ + V +++ P + PW P A + ++L +P
Sbjct: 274 LIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEP 333
Query: 344 RARLTAAQALSHPWVREGGDASEIP 368
AR++AA AL HP++ + D + P
Sbjct: 334 SARISAAAALRHPFLAKYHDPDDEP 358
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 184
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 305 YDHQSRLTAREAMEHPY 321
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 191
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 251
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 252 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 311
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 312 YDHQSRLTAREAMEHPY 328
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 197 TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
T+ D + ++L+ CH G++HRD+KP N + E L+ D+GL++F PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 257 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW------------- 301
++ V S Y+ PE+L + D+WS+G + ++ + PF+
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 302 -----DKTEDGIFKEVLRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 340
+ D I K + P F RK W +S A DF+ KLL
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 341 KDPRARLTAAQALSHPW 357
D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 16/254 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
AFE + + M + GG++ I + + + + E A Q++ H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSG 278
+++RD+KPEN L +D +++ +D GL+ +K G+ K + G+ ++APE+L +
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 279 PES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRRKPWPSISNSAKD 333
S D +++GV Y ++ R PF +K E+ K+ VL + K S ++KD
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKD 422
Query: 334 FVKKLLVKDPRARL 347
F + LL KDP RL
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 16/254 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
AFE + + M + GG++ I + + + + E A Q++ H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSG 278
+++RD+KPEN L +D +++ +D GL+ +K G+ K + G+ ++APE+L +
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 279 PES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRRKPWPSISNSAKD 333
S D +++GV Y ++ R PF +K E+ K+ VL + K S ++KD
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKD 422
Query: 334 FVKKLLVKDPRARL 347
F + LL KDP RL
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 16/254 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
AFE + + M + GG++ I + + + + E A Q++ H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSG 278
+++RD+KPEN L +D +++ +D GL+ +K G+ K + G+ ++APE+L +
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 279 PES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRRKPWPSISNSAKD 333
S D +++GV Y ++ R PF +K E+ K+ VL + K S ++KD
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKD 422
Query: 334 FVKKLLVKDPRARL 347
F + LL KDP RL
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 122/254 (48%), Gaps = 16/254 (6%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
++LG G FG + KA G A KK+ K ++ + E KIL A +V
Sbjct: 191 RVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKIL-AKVHSRFIVS 249
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
AFE + + M + GG++ I + + + + E A Q++ H
Sbjct: 250 LAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN 309
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSG 278
+++RD+KPEN L +D +++ +D GL+ +K G+ K + G+ ++APE+L +
Sbjct: 310 IIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEY 366
Query: 279 PES-DVWSIGVITYILLCGRRPF---WDKTEDGIFKE-VLRNKPDFRRKPWPSISNSAKD 333
S D +++GV Y ++ R PF +K E+ K+ VL + K S ++KD
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKD 422
Query: 334 FVKKLLVKDPRARL 347
F + LL KDP RL
Sbjct: 423 FCEALLQKDPEKRL 436
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 56/324 (17%)
Query: 90 YDKDFD--RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREV 147
+D FD Y I + +G+G +G A + G +VA+KKI N + + RE+
Sbjct: 47 FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI-PNAFDVVTNAKRTLREL 105
Query: 148 KILQALAGHENVVKF---------YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE 198
KIL+ H+N++ Y F+ VY+ ++L E L +I+ T
Sbjct: 106 KILKHFK-HDNIIAIKDILRPTVPYGEFKS---VYVVLDLMESD--LHQII-HSSQPLTL 158
Query: 199 KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGK 256
+ + Q+LR H ++HRD+KP N L E+ LK DFG++ + P +
Sbjct: 159 EHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAE 215
Query: 257 K---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT------- 304
+ V + +Y APE++ + D+WS+G I +L R+ F K
Sbjct: 216 HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQL 275
Query: 305 --------EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPR 344
+ + V +++ P + PW P A + ++L +P
Sbjct: 276 IMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS 335
Query: 345 ARLTAAQALSHPWVREGGDASEIP 368
AR++AA AL HP++ + D + P
Sbjct: 336 ARISAAAALRHPFLAKYHDPDDEP 359
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 112/285 (39%), Gaps = 32/285 (11%)
Query: 89 GYDKD-----FDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDV 143
GYD F + + LGHG +G + K +G AVK+ M +D
Sbjct: 45 GYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR----SMSPFRGPKDR 100
Query: 144 KR---EVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
R EV + + H V+ A+E+ +Y+ ELC G L + + E
Sbjct: 101 ARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC--GPSLQQHCEAWGASLPEAQ 158
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+R L A H GLVH D+KP N K DFGL + +
Sbjct: 159 VWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGDFGLLVELGTAGAGEV 215
Query: 261 IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR-----PFWDKTEDGIFKEVLRN 315
G Y+APE+L+ G +DV+S+G+ + C W + G
Sbjct: 216 QEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL------ 269
Query: 316 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
P+F +S+ + + +L DP+ R TA L+ P +R+
Sbjct: 270 PPEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 9 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 63
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 64 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 121
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 122 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 178
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 179 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 34 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 88
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 89 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 146
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 147 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 203
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 204 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 62 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 120 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 12 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 66
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 67 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 125 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 121/286 (42%), Gaps = 48/286 (16%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
DK F + +L+G G FG + A + +G +K+++ N E +REVK L
Sbjct: 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKAL 58
Query: 151 QALAGHENVVKFYNAFEDDNY----------------VYIAMELCEGGELLDRILAKKDS 194
L H N+V + ++ +Y ++I ME C+ G L I ++
Sbjct: 59 AKL-DHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 195 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
+ + A + Q+ + H L++RD+KP N K+ +K DFGL +K
Sbjct: 118 KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKN 174
Query: 255 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL--CG----RRPFWDKTEDG 307
K G+ Y++PE + + G E D++++G+I LL C F+ DG
Sbjct: 175 DGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETSKFFTDLRDG 234
Query: 308 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
I ++ K K ++KLL K P R ++ L
Sbjct: 235 IISDIFDKKE--------------KTLLQKLLSKKPEDRPNTSEIL 266
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 35 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 89
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 90 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 148 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 204
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 12 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 66
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 67 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 124
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 125 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 181
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 182 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 62 RHVNILLFM-GYSTAPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 120 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPE 176
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 120/283 (42%), Gaps = 34/283 (12%)
Query: 90 YDKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
+ K+ D Y I +++G G+FG KA G + VA+K ++ E +R
Sbjct: 7 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY------TERQRR 60
Query: 146 EVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
E ++ G H N+++ + V I E E G L D L D ++T
Sbjct: 61 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLV 119
Query: 203 VVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-- 257
++R + +R AE VHRD+ N L S + K +DFGLS F++
Sbjct: 120 GMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDP 173
Query: 258 -FQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 311
+ +G + APE + RK SD WS G++ + ++ G RP+WD + +
Sbjct: 174 TYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINA 233
Query: 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ + D+R P P S + KD AR Q +S
Sbjct: 234 I---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 27 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 81
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 82 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 139
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 140 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 196
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 197 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 35 DGQITVGQRIGSGSFGTVYKG--KWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 89
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 90 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 147
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 148 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 204
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 205 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 103/213 (48%), Gaps = 17/213 (7%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
D + T+G+ +G G FG Y K +GD VAVK + P ++ K EV +L+
Sbjct: 7 DGQITVGQRIGSGSFGTVY--KGKWHGD-VAVKMLNVTAPT-PQQLQAFKNEVGVLRK-T 61
Query: 155 GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
H N++ F + + I + CEG L L ++++ + RQ +
Sbjct: 62 RHVNILLFM-GYSTKPQLAIVTQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDY 119
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPE 271
H ++HRD+K N ED ++K DFGL+ +F+ + GS ++APE
Sbjct: 120 LHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPE 176
Query: 272 VLKRKS-GP---ESDVWSIGVITYILLCGRRPF 300
V++ + P +SDV++ G++ Y L+ G+ P+
Sbjct: 177 VIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 51/291 (17%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG A + + A+KKI + L + +V +L A H+ VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEV-----MLLASLNHQYVVRY 67
Query: 163 YNAF-EDDNYV------------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
Y A+ E N+V +I ME CE L D I ++ ++ + + + RQ+L
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRD-EYWRLFRQIL 126
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK 256
+ H G++HRD+KP N E ++K DFGL+ D +K PG
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 257 --KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
+G+A YVA EVL + D++S+G+I + ++ PF E +
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKK 240
Query: 313 LRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
LR+ PDF K ++ L+ DP R A L+ W+
Sbjct: 241 LRSVSIEFPPDFDDNKM----KVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 64/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 32 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 85
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 86 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 142
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 143 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRS 195
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-----------------WDKTED-- 306
Y++PE L+ +SD+WS+G+ + GR P D E
Sbjct: 196 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 255
Query: 307 --------------------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344
IF+ + + N+P + P S +DFV K L+K+P
Sbjct: 256 RPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPA 314
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ DA E+
Sbjct: 315 ERADLKQLMVHAFIKR-SDAEEV 336
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 118/283 (41%), Gaps = 34/283 (12%)
Query: 90 YDKDFDRRYT-IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKR 145
+ K+ D Y I +++G G+FG KA G + VA+K ++ E +R
Sbjct: 9 FAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGY------TERQRR 62
Query: 146 EVKILQALAG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAA 202
E ++ G H N+++ + V I E E G L D L D ++T
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGAL-DSFLRLNDGQFTVIQLV 121
Query: 203 VVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259
++R + +R AE VHRD+ N L S + K +DFGLS F++
Sbjct: 122 GMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEENSSDP 175
Query: 260 DIVGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 311
S + APE + RK SD WS G++ + ++ G RP+WD + +
Sbjct: 176 TETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDVINA 235
Query: 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 354
+ + D+R P P S + KD AR Q +S
Sbjct: 236 I---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 275
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 64/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 67 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 120
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 121 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 177
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 178 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRS 230
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-----------------WDKTED-- 306
Y++PE L+ +SD+WS+G+ + GR P D E
Sbjct: 231 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 290
Query: 307 --------------------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344
IF+ + + N+P + P S +DFV K L+K+P
Sbjct: 291 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQDFVNKCLIKNPA 349
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ DA E+
Sbjct: 350 ERADLKQLMVHAFIKR-SDAEEV 371
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 64/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 115
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 116 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRS 168
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-----------------WDKTED-- 306
Y++PE L+ +SD+WS+G+ + GR P D E
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 307 --------------------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344
IF+ + + N+P + P S +DFV K L+K+P
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ DA E+
Sbjct: 288 ERADLKQLMVHAFIKR-SDAEEV 309
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 64/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 115
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 116 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRS 168
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-----------------WDKTED-- 306
Y++PE L+ +SD+WS+G+ + GR P D E
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 307 --------------------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344
IF+ + + N+P + P S +DFV K L+K+P
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ DA E+
Sbjct: 288 ERADLKQLMVHAFIKR-SDAEEV 309
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 64/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 115
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 116 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRS 168
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-----------------WDKTED-- 306
Y++PE L+ +SD+WS+G+ + GR P D E
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 307 --------------------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344
IF+ + + N+P + P S +DFV K L+K+P
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ DA E+
Sbjct: 288 ERADLKQLMVHAFIKR-SDAEEV 309
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 136/323 (42%), Gaps = 64/323 (19%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF++ LG G G + + K +G +A K I I P + RE+++L
Sbjct: 5 DDDFEKISE----LGAGNGGVVFKVSHKPSGLVMARKLIHLE--IKPAIRNQIIRELQVL 58
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTE----KDAAVVVR 206
+V FY AF D + I ME +GG LD++L KK R E K + V++
Sbjct: 59 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KKAGRIPEQILGKVSIAVIK 115
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 266
+ + + H ++HRD+KP N L S E +K DFG+S + VG+
Sbjct: 116 GLTYLREK---HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRS 168
Query: 267 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF-----------------WDKTED-- 306
Y++PE L+ +SD+WS+G+ + GR P D E
Sbjct: 169 YMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPP 228
Query: 307 --------------------GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 344
IF+ + + N+P + P S +DFV K L+K+P
Sbjct: 229 RPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 345 ARLTAAQALSHPWVREGGDASEI 367
R Q + H +++ DA E+
Sbjct: 288 ERADLKQLMVHAFIKR-SDAEEV 309
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/212 (32%), Positives = 98/212 (46%), Gaps = 15/212 (7%)
Query: 91 DKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
D DF+R LG G G + +G +A K I I P + RE+++L
Sbjct: 15 DDDFERISE----LGAGNGGVVTKVQHRPSGLIMARKLIHLE--IKPAIRNQIIRELQVL 68
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
+V FY AF D + I ME +GG LD++L K+ R E+ V +LR
Sbjct: 69 HE-CNSPYIVGFYGAFYSDGEISICMEHMDGGS-LDQVL-KEAKRIPEEILGKVSIAVLR 125
Query: 211 VAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVA 269
A H ++HRD+KP N L S E +K DFG+S + VG+ Y+A
Sbjct: 126 GLAYLREKHQIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLI-DSMANSFVGTRSYMA 181
Query: 270 PEVLKRKS-GPESDVWSIGVITYILLCGRRPF 300
PE L+ +SD+WS+G+ L GR P
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 126/296 (42%), Gaps = 63/296 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQ 151
R + ++L G F + Y A D +G A+K++ EKN+ I+ +EV ++
Sbjct: 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAII--------QEVCFMK 80
Query: 152 ALAGHENVVKFYNAF-----EDDN---YVYIAMELCEGGELLDRILAKKDSRYTEKDAAV 203
L+GH N+V+F +A E D + ELC+G L L K +SR V
Sbjct: 81 KLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQ--LVEFLKKMESRGPLSCDTV 138
Query: 204 --VVRQMLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
+ Q R H+H ++HRD+K EN L + ++K DFG + I
Sbjct: 139 LKIFYQTCRAVQ--HMHRQKPPIIHRDLKVENLLLSN---QGTIKLCDFGSATTIS---H 190
Query: 258 FQDIVGSA----------------YYVAPEVLKRKS----GPESDVWSIGVITYILLCGR 297
+ D SA Y PE++ S G + D+W++G I Y+L +
Sbjct: 191 YPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQ 250
Query: 298 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
PF EDG ++ K + P + ++ +L +P RL+ A+ +
Sbjct: 251 HPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 120/276 (43%), Gaps = 51/276 (18%)
Query: 118 KANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH-----ENVVKFYNAFEDDNYV 172
K+N D++++K +D K E++I+ + E ++ Y+ V
Sbjct: 75 KSNNDKISIKS----------KYDDFKNELQIITDIKNEYCLTCEGIITNYDE------V 118
Query: 173 YIAMELCEGGELL--DRILAKKDSRYTEKDAAVVVRQMLR--VAAECHLHG---LVHRDM 225
YI E E +L D D YT V++ +++ + + ++H + HRD+
Sbjct: 119 YIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDV 178
Query: 226 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---GPESD 282
KP N L ++ +K +DFG S+++ KK + G+ ++ PE +S G + D
Sbjct: 179 KPSNIL---MDKNGRVKLSDFGESEYM-VDKKIKGSRGTYEFMPPEFFSNESSYNGAKVD 234
Query: 283 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-------------PDFRRKPWPS--- 326
+WS+G+ Y++ PF K +R K P +K S
Sbjct: 235 IWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNF 294
Query: 327 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 362
+SN DF+K L K+P R+T+ AL H W+ +
Sbjct: 295 LSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN 330
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 123/304 (40%), Gaps = 61/304 (20%)
Query: 86 TDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR 145
T + DK F + +L+G G FG + A + +G +++++ N E +R
Sbjct: 2 TKYTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAER 54
Query: 146 EVKILQALAGHENVVKFYNAFEDDNY-----------------------------VYIAM 176
EVK L L H N+V + ++ +Y ++I M
Sbjct: 55 EVKALAKL-DHVNIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQM 113
Query: 177 ELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 236
E C+ G L I ++ + + A + Q+ + H L+HRD+KP N K
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK 173
Query: 237 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL- 294
+ +K DFGL +K K G+ Y++PE + + G E D++++G+I LL
Sbjct: 174 Q---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 230
Query: 295 -CG----RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 349
C F+ DGI ++ K K ++KLL K P R
Sbjct: 231 VCDTAFETSKFFTDLRDGIISDIFDKK--------------EKTLLQKLLSKKPEDRPNT 276
Query: 350 AQAL 353
++ L
Sbjct: 277 SEIL 280
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 104 LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y Y T+ G+ VAVK +++ P +RE++IL+ L HE++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILRTLY-HEHI 72
Query: 160 VKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--RQMLRVAAEC 215
VK+ ED + V + ME G L D + R+ A +++ +Q+ A
Sbjct: 73 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYL 127
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPE 271
H +HR + N L + D +K DFGL+ + G ++ +D ++ APE
Sbjct: 128 HAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
Query: 272 VLKR-KSGPESDVWSIGVITYILL 294
LK K SDVWS GV Y LL
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 96/204 (47%), Gaps = 24/204 (11%)
Query: 104 LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y Y T+ G+ VAVK +++ P +RE++IL+ L HE++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEG--CGPQLRSGWQREIEILRTLY-HEHI 73
Query: 160 VKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--RQMLRVAAEC 215
VK+ ED + V + ME G L D + R+ A +++ +Q+ A
Sbjct: 74 VKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYL 128
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPE 271
H +HR + N L + D +K DFGL+ + G ++ +D ++ APE
Sbjct: 129 HAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 185
Query: 272 VLKR-KSGPESDVWSIGVITYILL 294
LK K SDVWS GV Y LL
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELL 209
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
RY +G G +G Y A D +G VA+K ++ + LPI+ REV +L+ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST---VREVALLRRLE 61
Query: 155 G--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVV 205
H NVV+ + V + E + LD+ T KD ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD---LM 118
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 265
RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNKPD 318
+Y APEVL + + D+WS+G I + + R+P + + IF + L + D
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 319 FRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
RY +G G +G Y A D +G VA+K ++ + LPI+ REV +L+ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST---VREVALLRRLE 61
Query: 155 G--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVV 205
H NVV+ + V + E + LD+ T KD ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD---LM 118
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 265
RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNKPD 318
+Y APEVL + + D+WS+G I + + R+P + + IF + L + D
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 319 FRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 55/300 (18%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N +RV VK ++ K + +KREVKIL+ L G
Sbjct: 40 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKK------KKIKREVKILENLRGGT 93
Query: 158 NVVKFYNAFED--DNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
N++K + +D + E + L +IL D R+ + ++L+
Sbjct: 94 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF-------YMYELLKALD 146
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
CH G++HRD+KP N + ++ L+ D+GL++F P +++ V S Y+ PE+L
Sbjct: 147 YCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELL 204
Query: 274 --KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------------GIFKEV-L 313
+ D+WS+G + ++ R PF+ ++ G K+ +
Sbjct: 205 VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI 264
Query: 314 RNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P F RK W + +S A D + KLL D + RLTA +A+ HP+
Sbjct: 265 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 324
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 139/353 (39%), Gaps = 100/353 (28%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP-IAVEDVKREVKILQALAGH 156
Y I L+G G +GY Y+A DK VA+KK+ N+M I + + RE+ IL L
Sbjct: 30 YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKV--NRMFEDLIDCKRILREITILNRLKS- 86
Query: 157 ENVVKFYNAFEDDNY-----VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ +++ ++ ++ +YI +E+ + + L K TE+ ++ +L
Sbjct: 87 DYIIRLHDLIIPEDLLKFDELYIVLEIADSDL---KKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 212 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK------------------ 253
H G++HRD+KP N L +D S+K DFGL+ I
Sbjct: 144 EKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENE 200
Query: 254 -PG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITYILL--------- 294
PG K+ V + +Y APE +L+ D+WS G I LL
Sbjct: 201 EPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 295 -CGRRPFW---------------------DKTEDGIFKEVLRNKP--------------- 317
R P + ++ + I V+ P
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 318 ----------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
D +K + SIS D ++ +L + + R+T +ALSHP++++
Sbjct: 321 IKLFPTRDGIDLSKK-YSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLKD 372
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 117/273 (42%), Gaps = 31/273 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQALAGHEN 158
+G G +G K +G +AVK+I EK + L + ++ V R +
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRS-------SDCPY 82
Query: 159 VVKFYNAFEDDNYVYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+V+FY A + +I MEL + + + D E+ + + V A H
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKIT--LATVKALNH 140
Query: 217 LH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEV 272
L ++HRD+KP N L + ++K DFG+S + K +D G Y+APE
Sbjct: 141 LKENLKIIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPER 196
Query: 273 LKRKSGPE-----SDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWP 325
+ + + SDVWS+G+ Y L GR P+ W+ D + + V + P
Sbjct: 197 IDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEER 256
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
S S +FV L KD R + L HP++
Sbjct: 257 EFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 135/300 (45%), Gaps = 55/300 (18%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y + + LG G++ + A + N +RV VK ++ + +KREVKIL+ L G
Sbjct: 45 YQLVRKLGRGKYSEVFEAINITNNERVVVKILKPV------KKKKIKREVKILENLRGGT 98
Query: 158 NVVKFYNAFED--DNYVYIAMELCEGGEL--LDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
N++K + +D + E + L +IL D R+ + ++L+
Sbjct: 99 NIIKLIDTVKDPVSKTPALVFEYINNTDFKQLYQILTDFDIRF-------YMYELLKALD 151
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
CH G++HRD+KP N + ++ L+ D+GL++F P +++ V S Y+ PE+L
Sbjct: 152 YCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELL 209
Query: 274 --KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------------GIFKEV-L 313
+ D+WS+G + ++ R PF+ ++ G K+ +
Sbjct: 210 VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHI 269
Query: 314 RNKPDFR-------RKPWPS---------ISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
P F RK W + +S A D + KLL D + RLTA +A+ HP+
Sbjct: 270 DLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAMEHPY 329
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 17/227 (7%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G+R Y + + +G G FG Y K +GD VAVK I K P
Sbjct: 21 PRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVY--KGKWHGD-VAVK-ILKVVDPTPEQF 76
Query: 141 EDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD 200
+ + EV +L+ H N++ F DN + I + CEG L L +++++
Sbjct: 77 QAFRNEVAVLRK-TRHVNILLFMGYMTKDN-LAIVTQWCEGSSLYKH-LHVQETKFQMFQ 133
Query: 201 AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKK 257
+ RQ + H ++HRDMK N E ++K DFGL+ ++
Sbjct: 134 LIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWSGSQQ 190
Query: 258 FQDIVGSAYYVAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 300
+ GS ++APEV++ + + P +SDV+S G++ Y L+ G P+
Sbjct: 191 VEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 129/298 (43%), Gaps = 46/298 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREVKILQALA 154
RY +G G +G Y A D +G VA+K ++ + LPI+ REV +L+ L
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPIST---VREVALLRRLE 61
Query: 155 G--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSRYTEKDAAVVV 205
H NVV+ + V + E + LD+ T KD ++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD---LM 118
Query: 206 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 265
RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V +
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 266 YYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNKPD 318
+Y APEVL + + D+WS+G I + + R+P + + IF + L + D
Sbjct: 176 WYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 234
Query: 319 FRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
+ R +P P + S + ++L +P R++A +AL H ++
Sbjct: 235 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 47 IERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGY------TEKQRRDFLCEASIMGQ 100
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H NVV V I +E E G L D L K D ++T ++R +
Sbjct: 101 FDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMR 159
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVA 269
G VHRD+ N L S + K +DFGLS I+ P + G + A
Sbjct: 160 YLADMGYVHRDLAARNILVNS---NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTA 216
Query: 270 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
PE ++ RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 217 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 261
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 74/352 (21%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G F + D RY + + LG G F ++A D N VA+K + +K +
Sbjct: 4 PGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYT 59
Query: 141 EDVKREVKILQAL----------AGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRI 188
E + E+K+LQ + G +++K + F + N V++ M GE L +
Sbjct: 60 EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 119
Query: 189 LAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-- 241
+ K + R Y ++ + ++ + + C G++H D+KPEN L + +L
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQ 176
Query: 242 -KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 299
K D G + + + + + + + Y +PEVL G +D+WS + + L+ G
Sbjct: 177 IKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 300 F-------WDKTEDGIFK--EVLRNKPDF----------------------RRKPWP--- 325
F + K +D I + E+L P + + K WP
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 294
Query: 326 ----------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
+ DF+ +L DPR R A ++HPW+++ EI
Sbjct: 295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 127/301 (42%), Gaps = 49/301 (16%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIE-----KNKMILPIAVEDVKREVKILQ 151
RY +G G +G Y A D +G VA+K + LPI+ REV +L+
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPIST---VREVALLR 66
Query: 152 ALAG--HENVVKFYNAFEDDNY-----VYIAMELCEGG--ELLDRILAKKDSRYTEKDAA 202
L H NVV+ + V + E + LD+ T KD
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD-- 124
Query: 203 VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV 262
++RQ LR H + +VHRD+KPEN L S ++K DFGL+ +V
Sbjct: 125 -LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVV 180
Query: 263 GSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRN 315
+ +Y APEVL + + D+WS+G I + + R+P + + IF + L
Sbjct: 181 VTLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 316 KPDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
+ D+ R +P P + S + ++L +P R++A +AL H +
Sbjct: 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSY 299
Query: 358 V 358
+
Sbjct: 300 L 300
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 104 LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y Y T+ G+ VAVK ++ + P K+E+ IL+ L HE++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLY-HEHI 78
Query: 160 VKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--RQMLRVAAEC 215
+K+ ED + + + ME G L D + R++ A +++ +Q+ A
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPE 271
H +HR++ N L + D +K DFGL+ + G ++ +D ++ APE
Sbjct: 134 HAQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 272 VLKR-KSGPESDVWSIGVITYILL 294
LK K SDVWS GV Y LL
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELL 214
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 143/352 (40%), Gaps = 74/352 (21%)
Query: 81 PCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV 140
P G F + D RY + + LG G F ++A D N VA+K + +K +
Sbjct: 4 PGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK----VYT 59
Query: 141 EDVKREVKILQAL----------AGHENVVKFYNAF--EDDNYVYIAMELCEGGELLDRI 188
E + E+K+LQ + G +++K + F + N V++ M GE L +
Sbjct: 60 EAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLAL 119
Query: 189 LAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL-- 241
+ K + R Y ++ + ++ + + C G++H D+KPEN L + +L
Sbjct: 120 IKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC---GIIHTDIKPENVLMEIVDSPENLIQ 176
Query: 242 -KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRP 299
K D G + + + + + + + Y +PEV L G +D+WS + + L+ G
Sbjct: 177 IKIADLGNACWYD--EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 300 F-------WDKTEDGIFK--EVLRNKPDF----------------------RRKPWP--- 325
F + K +D I + E+L P + + K WP
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 294
Query: 326 ----------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 367
+ DF+ +L DPR R A ++HPW+++ EI
Sbjct: 295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEI 346
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 104 LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y Y T+ G+ VAVK ++ + P K+E+ IL+ L HE++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--CGPQHRSGWKQEIDILRTLY-HEHI 78
Query: 160 VKFYNAFED--DNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--RQMLRVAAEC 215
+K+ ED + + + ME G L D + R++ A +++ +Q+ A
Sbjct: 79 IKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYL 133
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPE 271
H +HR++ N L + D +K DFGL+ + G ++ +D ++ APE
Sbjct: 134 HSQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 190
Query: 272 VLKR-KSGPESDVWSIGVITYILL 294
LK K SDVWS GV Y LL
Sbjct: 191 CLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G+ +G G FG + T+ N +VA+K E + P + D R K+L G
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAP-QLRDEYRTYKLLAGCTGIP 68
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
NV F ++ + + ++L G L+ +L +++ K A+ +QML H
Sbjct: 69 NVYYF---GQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 123
Query: 218 HGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYY 267
LV+RD+KP+NFL ++K + + DFG+ F + P ++ +++ G+A Y
Sbjct: 124 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARY 183
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 300
++ L R+ D+ ++G + L G P+
Sbjct: 184 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 217
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIA 175
VA+K + K A E E++IL+ L + NV+ F N++ +
Sbjct: 122 HQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235
EL L + I K ++ +L+ H + ++H D+KPEN L K
Sbjct: 178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ- 235
Query: 236 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILL 294
+ S +K DFG S + ++ + S +Y APEV L + G D+WS+G I LL
Sbjct: 236 QGRSGIKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 295 CG 296
G
Sbjct: 294 TG 295
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 18/214 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y +G+ +G G FG + T+ N +VA+K E + P + D R K+L G
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIK-FEPRRSDAP-QLRDEYRTYKLLAGCTGIP 69
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
NV F ++ + + ++L G L+ +L +++ K A+ +QML H
Sbjct: 70 NVYYF---GQEGLHNVLVIDLL--GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHE 124
Query: 218 HGLVHRDMKPENFLF--KSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYY 267
LV+RD+KP+NFL ++K + + DFG+ F + P ++ +++ G+A Y
Sbjct: 125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARY 184
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF 300
++ L R+ D+ ++G + L G P+
Sbjct: 185 MSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 101/238 (42%), Gaps = 27/238 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 37 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------TEKQRRDFLSEASIMGQ 90
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H NV+ V I E E G L D L + D ++T ++R +
Sbjct: 91 FDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAY---Y 267
VHRD+ N L S + K +DFGLS F++ + +G +
Sbjct: 150 YLADMNYVHRDLAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 206
Query: 268 VAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
APE ++ RK SDVWS G++ + ++ G RP+WD T + + + D+R P
Sbjct: 207 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPP 261
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIA 175
VA+K + K A E E++IL+ L + NV+ F N++ +
Sbjct: 122 HQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235
EL L + I K ++ +L+ H + ++H D+KPEN L K
Sbjct: 178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ- 235
Query: 236 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILL 294
+ S +K DFG S + ++ + S +Y APEV L + G D+WS+G I LL
Sbjct: 236 QGRSGIKVIDFGSSCYEH--QRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 295 CG 296
G
Sbjct: 294 TG 295
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 105/242 (43%), Gaps = 27/242 (11%)
Query: 72 NSRRQTGVIPCGKRTDFGYDKD-----------FDRRYTIGKLLGHGQFGYTYVATDKAN 120
N++++ G+ G + GYD D RY + K++G G FG A D
Sbjct: 64 NAKKRQGMT--GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKV 121
Query: 121 GDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE-----NVVKFYNAFEDDNYVYIA 175
VA+K + K A E E++IL+ L + NV+ F N++ +
Sbjct: 122 HQHVALKMVRNEKRFHRQAAE----EIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMT 177
Query: 176 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 235
EL L + I K ++ +L+ H + ++H D+KPEN L K
Sbjct: 178 FELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ- 235
Query: 236 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILL 294
+ S +K DFG S + ++ + S +Y APEV L + G D+WS+G I LL
Sbjct: 236 QGRSGIKVIDFGSSCYEH--QRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELL 293
Query: 295 CG 296
G
Sbjct: 294 TG 295
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 333 DFVKKLLVKDPRARLTAAQALSHPWVR 359
DF+K+ L DP R+T QAL HPW+R
Sbjct: 387 DFLKQCLEWDPAVRMTPGQALRHPWLR 413
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 13/210 (6%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNK-MILPIAVEDVKREVKILQALAGHE 157
T+ +++G G FG Y A GD VAVK + + +E+V++E K+ A+ H
Sbjct: 10 TLEEIIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLF-AMLKHP 66
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQMLRVAAECH 216
N++ + + + ME GG L +R+L+ K+ + AV + + + +
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPL-NRVLSGKRIPPDILVNWAVQIARGMNYLHDEA 125
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSL-----KATDFGLSDFIKPGKKFQDIVGSAYYVAPE 271
+ ++HRD+K N L E+ L K TDFGL+ K G+ ++APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPE 184
Query: 272 VLKRKS-GPESDVWSIGVITYILLCGRRPF 300
V++ SDVWS GV+ + LL G PF
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 104 LGHGQFG----YTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y Y T+ G+ VAVK ++ + P K+E+ IL+ L HE++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAG--PQHRSGWKQEIDILRTLY-HEHI 95
Query: 160 VKFYNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV--RQMLRVAAEC 215
+K+ ED + + ME G L D + R++ A +++ +Q+ A
Sbjct: 96 IKYKGCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYL 150
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPE 271
H +HRD+ N L + D +K DFGL+ + G + +D ++ APE
Sbjct: 151 HAQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPE 207
Query: 272 VLKR-KSGPESDVWSIGVITYILL 294
LK K SDVWS GV Y LL
Sbjct: 208 CLKEYKFYYASDVWSFGVTLYELL 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHE 157
+ +++G G FG V K VA+K+IE VE L+ L+ H
Sbjct: 13 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVE--------LRQLSRVNHP 62
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+VK Y A N V + ME EGG L + + A+ YT A Q + A H
Sbjct: 63 NIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 120
Query: 217 LH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
L+HRD+KP N L + + LK DFG + I+ + GSA ++APEV
Sbjct: 121 SMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVF 176
Query: 274 KRKSGPE-SDVWSIGVITYILLCGRRPF 300
+ + E DV+S G+I + ++ R+PF
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K P + E KI + + G
Sbjct: 8 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHP----QLHIESKIYKMMQGG 62
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +Y + MEL G L+ + +++ K ++ QM+ H
Sbjct: 63 VGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYYV 268
+HRD+KP+NFL K+ + + DFGL+ + P ++ +++ G+A Y
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 180
Query: 269 APEV-LKRKSGPESDVWSIGVITYILLCGRRPF 300
+ L + D+ S+G + G P+
Sbjct: 181 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 213
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 97/208 (46%), Gaps = 23/208 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA--GHE 157
+ +++G G FG V K VA+K+IE VE L+ L+ H
Sbjct: 12 VEEVVGRGAFGV--VCKAKWRAKDVAIKQIESESERKAFIVE--------LRQLSRVNHP 61
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVAAECH 216
N+VK Y A N V + ME EGG L + + A+ YT A Q + A H
Sbjct: 62 NIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLH 119
Query: 217 LH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 273
L+HRD+KP N L + + LK DFG + I+ + GSA ++APEV
Sbjct: 120 SMQPKALIHRDLKPPNLLLVAG--GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVF 175
Query: 274 KRKSGPE-SDVWSIGVITYILLCGRRPF 300
+ + E DV+S G+I + ++ R+PF
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 16/213 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY +G+ +G G FG Y+ TD A G+ VA+K +E K P + E KI + + G
Sbjct: 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK-LECVKTKHP----QLHIESKIYKMMQGG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +Y + MEL G L+ + +++ K ++ QM+ H
Sbjct: 65 VGIPTIRWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYYV 268
+HRD+KP+NFL K+ + + DFGL+ + P ++ +++ G+A Y
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 269 APEV-LKRKSGPESDVWSIGVITYILLCGRRPF 300
+ L + D+ S+G + G P+
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKI-----EKNKMILPIAVEDVKREVKILQALAG 155
G++LG G FG T + G+ + +K++ E + L +EVK+++ L
Sbjct: 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFL--------KEVKVMRCLE- 65
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H NV+KF D + E +GG L I+ DS+Y + + A
Sbjct: 66 HPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMAYL 124
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--------------KPG-KKFQD 260
H ++HRD+ N L +E+ ++ DFGL+ + KP KK
Sbjct: 125 HSMNIIHRDLNSHNCL---VRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 261 IVGSAYYVAPEVLKRKSGPES-DVWSIGVI 289
+VG+ Y++APE++ +S E DV+S G++
Sbjct: 182 VVGNPYWMAPEMINGRSYDEKVDVFSFGIV 211
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 111/256 (43%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI ME G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVMEYMSKGCLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 46/237 (19%)
Query: 104 LGHGQFGYTYVATDK---ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
+G G F Y+AT + +++A+K + + IA E ++ L G +NV+
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAE-----LQCLTVAGGQDNVM 83
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
F +++V IAM E LD + + + ++ + + + H G+
Sbjct: 84 GVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGI 138
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSD-----------FIKPGKKFQDI-------- 261
VHRD+KP NFL+ + +L DFGL+ F++ + +
Sbjct: 139 VHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSIC 196
Query: 262 ----------VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTED 306
G+ + APEVL + + D+WS GVI LL GR PF+ ++D
Sbjct: 197 LSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 124/291 (42%), Gaps = 51/291 (17%)
Query: 103 LLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
+LG G FG A + + A+KKI + L + EV +L +L H+ VV++
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS----EVXLLASL-NHQYVVRY 67
Query: 163 YNAF-EDDNYV------------YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQML 209
Y A+ E N+V +I E CE L D I ++ ++ + + + RQ+L
Sbjct: 68 YAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRD-EYWRLFRQIL 126
Query: 210 RVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK------PGK 256
+ H G++HR++KP N E ++K DFGL+ D +K PG
Sbjct: 127 EALSYIHSQGIIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 257 --KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 312
+G+A YVA EVL + D +S+G+I + + PF E +
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXERVNILKK 240
Query: 313 LRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 358
LR+ PDF K ++ L+ DP R A L+ W+
Sbjct: 241 LRSVSIEFPPDFDDNK----XKVEKKIIRLLIDHDPNKRPGARTLLNSGWL 287
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
TI +++G G+FG K G R VA+K + EK + D E I+
Sbjct: 25 TIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQR-------RDFLGEASIM 77
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N++ V I E E G L D L K D ++T ++R +
Sbjct: 78 GQF-DHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISA 135
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 136 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ APE + RK SDVWS G++ + ++ G RP+W+ T + K V
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAV 240
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 111/256 (43%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI +E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 111/256 (43%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI +E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVIEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 120/282 (42%), Gaps = 35/282 (12%)
Query: 89 GYDKDFD---RRYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDV 143
G +D++ R +G+ +G GQFG + + N K KN D
Sbjct: 3 GSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDS 56
Query: 144 KREVKILQALA----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEK 199
RE + +AL H ++VK +N V+I MELC GEL + +K Y+
Sbjct: 57 VREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLD 112
Query: 200 DAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 257
A++++ A +L VHRD+ N L S + +K DFGLS +++
Sbjct: 113 LASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTY 169
Query: 258 FQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 313
++ G ++APE + R+ SDVW GV + IL+ G +PF + + +
Sbjct: 170 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE 229
Query: 314 RNKPDFRRKPW-PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
+ R P P+ + + K DP R R T +A
Sbjct: 230 NGE----RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 267
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 86
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQ 146
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 203
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 204 DXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G +G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 26 NFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAA---MVDITTEELKQQFDQE 80
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+K++ A HEN+V+ D + + + G LLDR+ + +
Sbjct: 81 IKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139
Query: 207 QMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----- 260
Q H + +HRD+K N L A + K +DFGL+ + +KF
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQTVMXX 193
Query: 261 -IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 296
IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 120/297 (40%), Gaps = 35/297 (11%)
Query: 67 QHQKTNSRRQTGVIPCGKRTDFGYDKDF----DRRYTIGKLLGHGQFGYTYVATDKANGD 122
+H R T V P K G KD + LG G FG ++ T NG
Sbjct: 152 KHADGLCHRLTNVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGT--WNGT 209
Query: 123 -RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181
RVA+K ++ M + E +E ++++ L HE +V+ Y ++ +YI E
Sbjct: 210 TRVAIKTLKPGNM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSK 263
Query: 182 GELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
G LLD L + +Y V + Q+ A VHRD++ N L E+
Sbjct: 264 GSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL---VGENLV 319
Query: 241 LKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITY 291
K DFGL I + G KF + APE L + +SDVWS G+ +T
Sbjct: 320 CKVADFGLGRLIEDNEYTARQGAKF-----PIKWTAPEAALYGRFTIKSDVWSFGILLTE 374
Query: 292 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 348
+ GR P+ + +V R +R P S D + + KDP R T
Sbjct: 375 LTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKDPEERPT 428
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 32/271 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K Y+ A++++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQL 120
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
++APE + R+ SDVW GV + IL+ G +PF + + + + R P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----RLPM 233
Query: 325 -PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
P+ + + K DP R R T +A
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVCEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G +G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 26 NFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAA---MVDITTEELKQQFDQE 80
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+K++ A HEN+V+ D + + + G LLDR+ + +
Sbjct: 81 IKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 139
Query: 207 QMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----- 260
Q H + +HRD+K N L A + K +DFGL+ + +KF
Sbjct: 140 QGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQTVMXS 193
Query: 261 -IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 296
IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 194 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 25/217 (11%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G +G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 20 NFDERPISVGGNKMGEGGFGVVYKGY--VNNTTVAVKKLAA---MVDITTEELKQQFDQE 74
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+K++ A HEN+V+ D + + + G LLDR+ + +
Sbjct: 75 IKVM-AKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIA 133
Query: 207 QMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----- 260
Q H + +HRD+K N L A + K +DFGL+ + +KF
Sbjct: 134 QGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQXVMXX 187
Query: 261 -IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 296
IVG+ Y+APE L+ + P+SD++S GV+ ++ G
Sbjct: 188 RIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 32/271 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 39 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 92
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K Y+ A++++
Sbjct: 93 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQL 148
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 205
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
++APE + R+ SDVW GV + IL+ G +PF + + + + R P
Sbjct: 206 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----RLPM 261
Query: 325 -PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
P+ + + K DP R R T +A
Sbjct: 262 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 292
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 100/238 (42%), Gaps = 27/238 (11%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I +++G G+FG K G R VA+K ++ E +R+ ++ G
Sbjct: 11 IEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY------TEKQRRDFLSEASIMGQ 64
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H NV+ V I E E G L D L + D ++T ++R +
Sbjct: 65 FDHPNVIHLEGVVTKSTPVMIITEFMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAY---Y 267
VHR + N L S + K +DFGLS F++ + +G +
Sbjct: 124 YLADMNYVHRALAARNILVNS---NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW 180
Query: 268 VAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 323
APE ++ RK SDVWS G++ + ++ G RP+WD T + + + D+R P
Sbjct: 181 TAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI---EQDYRLPP 235
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 32/271 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 8 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 61
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K Y+ A++++
Sbjct: 62 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQL 117
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 174
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
++APE + R+ SDVW GV + IL+ G +PF + + + + R P
Sbjct: 175 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----RLPM 230
Query: 325 -PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
P+ + + K DP R R T +A
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 32/271 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K Y+ A++++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQL 120
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
++APE + R+ SDVW GV + IL+ G +PF + + + + R P
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----RLPM 233
Query: 325 -PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
P+ + + K DP R R T +A
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 120/292 (41%), Gaps = 51/292 (17%)
Query: 38 NHHARNDTTHKHQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIPCGKRTDFGYDKDFDRR 97
+H A H QH + + KQH +S + T +P D R
Sbjct: 3 SHEAAAAQQHNSGTQHTVSGSQQEGQQRKQH---HSSKPTASMPRPHS-----DWQIPDR 54
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
Y I L+G G +G+ A DK VA+KKI + L I + + RE+ IL L H+
Sbjct: 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDL-IDCKRILREIAILNRL-NHD 112
Query: 158 NVVKFYNA-----FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+VVK + E + +Y+ +E+ + + L + TE ++ +L
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLEIADSDF---KKLFRTPVYLTELHIKTLLYNLLVGV 169
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPG-------------- 255
H G++HRD+KP N L +D S+K DFGL+ D+ + G
Sbjct: 170 KYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226
Query: 256 -----------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITYILL 294
++ V + +Y APE +L+ DVWSIG I LL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
Score = 32.7 bits (73), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 324 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 360
+P+ S A +K++LV +P R+T + L+HP+ +E
Sbjct: 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKE 402
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 15 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 67
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 68 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 126 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 177
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 178 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 234
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 235 DLMCQCWRKDPEERPT 250
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 17 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 69
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 70 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 128 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 179
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 180 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 236
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 237 DLMCQCWRKDPEERPT 252
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 13 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 66
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K Y+ A++++
Sbjct: 67 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQL 122
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 179
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
++APE + R+ SDVW GV + IL+ G +PF
Sbjct: 180 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 115/271 (42%), Gaps = 32/271 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 16 RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKN------CTSDSVREKFLQEALT 69
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K Y+ A++++
Sbjct: 70 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---YSLDLASLILYAYQL 125
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 182
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
++APE + R+ SDVW GV + IL+ G +PF + + + + R P
Sbjct: 183 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----RLPM 238
Query: 325 -PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
P+ + + K DP R R T +A
Sbjct: 239 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 269
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 245 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 303 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 354
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 411
Query: 333 DFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 412 DLMCQCWRKEPEERPT 427
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 112/252 (44%), Gaps = 23/252 (9%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 275 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 327
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y A + +YI E G LLD L + +Y V + Q+ A V
Sbjct: 328 Y-AVVSEEPIYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 385
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRKS 277
HRD++ N L E+ K DFGL+ I+ ++ G+ + + APE L +
Sbjct: 386 HRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGRF 441
Query: 278 GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 336
+SDVWS G+ +T + GR P+ + +V R +R P S D +
Sbjct: 442 TIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMC 498
Query: 337 KLLVKDPRARLT 348
+ K+P R T
Sbjct: 499 QCWRKEPEERPT 510
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 14 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 71
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 72 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 131
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 132 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 188
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 189 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 248
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 121/297 (40%), Gaps = 35/297 (11%)
Query: 67 QHQKTNSRRQTGVIPCGKRTDFGYDKDF----DRRYTIGKLLGHGQFGYTYVATDKANGD 122
+H R T V P K G KD + LG G FG ++ T NG
Sbjct: 151 KHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGT--WNGT 208
Query: 123 -RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEG 181
RVA+K ++ M + E +E ++++ L HE +V+ Y ++ +YI E
Sbjct: 209 TRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEP-IYIVTEYMSK 262
Query: 182 GELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 240
G LLD L + +Y V + Q+ A VHRD++ N L E+
Sbjct: 263 GSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL---VGENLV 318
Query: 241 LKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGV-ITY 291
K DFGL+ I + G KF + APE L + +SDVWS G+ +T
Sbjct: 319 CKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAALYGRFTIKSDVWSFGILLTE 373
Query: 292 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 348
+ GR P+ + +V R +R P S D + + K+P R T
Sbjct: 374 LTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPT 427
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 18 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 75
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 76 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 135
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 136 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 192
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 193 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 252
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 21 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 78
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 79 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 138
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 139 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 195
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 196 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 255
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD+ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLAAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ + HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKIR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 26 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 79 YAVVSEEP-IYIVTEYMSKGCLLD-FLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 137 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 188
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 189 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 245
Query: 333 DFVKKLLVKDPRARLT 348
D + + KDP R T
Sbjct: 246 DLMCQCWRKDPEERPT 261
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 22 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 79
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 80 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 139
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 140 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 196
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 197 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 256
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 108/251 (43%), Gaps = 28/251 (11%)
Query: 78 GVIPCGK-RTDFGYDKDFD-RRYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKI--- 129
G++P G +T + K+ D +I K++G G+FG K + VA+K +
Sbjct: 13 GLVPRGSTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG 72
Query: 130 --EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDR 187
EK + D E I+ H N+++ V I E E G L D
Sbjct: 73 YTEKQR-------RDFLGEASIMGQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DS 123
Query: 188 ILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 247
L K D+++T ++R + G VHRD+ N L S + K +DFG
Sbjct: 124 FLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFG 180
Query: 248 LSDFIK--PGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFW 301
LS ++ P + G + +PE + RK SDVWS G++ + ++ G RP+W
Sbjct: 181 LSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 240
Query: 302 DKTEDGIFKEV 312
+ + + K V
Sbjct: 241 EMSNQDVIKAV 251
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 127
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 128 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 187
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 188 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 244
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 245 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 86
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQ 146
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 203
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I L+G G FG A D+ + VA+K I+ K L + EV++L+ + H
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----NQAQIEVRLLELMNKH 110
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDR----ILAKKDSR-----YTEKDAAVVVRQ 207
+ +K+Y ++++ LC E+L +L + R T K A +
Sbjct: 111 DTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L +A ++H D+KPEN L + K S++K DFG S + G++ + S +Y
Sbjct: 170 LLFLATP--ELSIIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFY 224
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 305
+PEV L D+WS+G I + G F E
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 100/219 (45%), Gaps = 20/219 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I L+G G FG A D+ + VA+K I+ K L + EV++L+ + H
Sbjct: 36 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----NQAQIEVRLLELMNKH 91
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDR----ILAKKDSR-----YTEKDAAVVVRQ 207
+ +K+Y ++++ LC E+L +L + R T K A +
Sbjct: 92 DTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 150
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L +A ++H D+KPEN L + K S++K DFG S + G++ + S +Y
Sbjct: 151 LLFLATP--ELSIIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFY 205
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 305
+PEV L D+WS+G I + G F E
Sbjct: 206 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 244
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 19 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 71
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 72 YAVVSEEP-IYIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 130 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 181
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 182 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 238
Query: 333 DFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 239 DLMCQCWRKEPEERPT 254
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 192 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 244
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 245 YAVVSEEP-IYIVGEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 303 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 354
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 355 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 411
Query: 333 DFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 412 DLMCQCWRKEPEERPT 427
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 86
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQ 146
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 203
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 105/245 (42%), Gaps = 31/245 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDR----VAVKKI-----EKNKMILPIAVEDVKREVKILQA 152
K++G G+FG Y K + + VA+K + EK ++ D E I+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRV-------DFLGEAGIMGQ 102
Query: 153 LAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA 212
+ H N+++ + I E E G L D+ L +KD ++ ++R +
Sbjct: 103 FS-HHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAAGM 160
Query: 213 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYV 268
VHRD+ N L S + K +DFGLS ++ P + G +
Sbjct: 161 KYLANMNYVHRDLAARNILVNS---NLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWT 217
Query: 269 APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 326
APE + RK SDVWS G++ + ++ G RP+W+ + EV++ D R P P
Sbjct: 218 APEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDGFRLPTPM 273
Query: 327 ISNSA 331
SA
Sbjct: 274 DCPSA 278
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 115/271 (42%), Gaps = 32/271 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 444
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K ++ A++++
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQL 500
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ ++ G
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
++APE + R+ SDVW GV + IL+ G +PF + + + + R P
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE----RLPM 613
Query: 325 -PSISNSAKDFVKKLLVKDP--RARLTAAQA 352
P+ + + K DP R R T +A
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 106/240 (44%), Gaps = 31/240 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVAT------DKANG-DRVAVKKIEKNKMILPIAVEDVKREVKI 149
R +GK LG G FG +A DK N +VAVK ++ + ++ D+ E+++
Sbjct: 29 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLS--DLISEMEM 86
Query: 150 LQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSR 195
++ + H+N++ A D +Y+ +E G L + + A++ + +
Sbjct: 87 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQ 146
Query: 196 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFI 252
+ KD Q+ R +HRD+ N L ED+ +K DFGL+ I
Sbjct: 147 LSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDIHHI 203
Query: 253 KPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
KK + ++APE L R +SDVWS GV+ + I G P+ + +FK
Sbjct: 204 DYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFK 263
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 130
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
A + +V I MEL EGG L I K+ E A + Q L H ++H
Sbjct: 131 GAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 188
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVGSAYYVAPE-VLKRK 276
D+K +N L S ++L DFG + ++P GK I G+ ++APE V+ +
Sbjct: 189 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 246
Query: 277 SGPESDVWSIGVITYILLCGRRPF 300
+ D+WS + +L G P+
Sbjct: 247 CDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 23 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 75
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 76 YAVVSEEP-IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 134 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAAL 185
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 242
Query: 333 DFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 243 DLMCQCWRKEPEERPT 258
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 110/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 23 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 75
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ +YI E G LLD L + +Y V + Q+ A V
Sbjct: 76 YAVVSEEP-IYIVTEYMNKGSLLD-FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYV 133
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 134 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEWTARQGAKF-----PIKWTAPEAAL 185
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 186 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 242
Query: 333 DFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 243 DLMCQCWRKEPEERPT 258
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 190 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 248
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V AF + + ++L GG+L + + ++E D +++
Sbjct: 249 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEH 306
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
H +V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEVL
Sbjct: 307 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVL 361
Query: 274 KRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
++ +S D +S+G + + LL G PF KT+D E+ R + S S
Sbjct: 362 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPE 419
Query: 331 AKDFVKKLLVKDPRARL 347
+ ++ LL +D RL
Sbjct: 420 LRSLLEGLLQRDVNRRL 436
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 117/298 (39%), Gaps = 42/298 (14%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD ++ R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 90
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 195
E + E+K+L L H N+V A + E C G+LL+ + K+DS
Sbjct: 91 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 148
Query: 196 YTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239
K + ++ Q+ + A +HRD+ N L +
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT- 207
Query: 240 SLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGPESDVWSIGVITYILL 294
K DFGL+ IK + + G+A ++APE + ESDVWS G+ + L
Sbjct: 208 --KICDFGLARHIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 295 -CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
G P+ D F +++ K FR D +K DP R T Q
Sbjct: 265 SLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI +E G LLD + ++ E +A V++ ++++
Sbjct: 81 GVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 138 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V AF + + ++L GG+L + + ++E D +++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEH 307
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
H +V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEVL
Sbjct: 308 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVL 362
Query: 274 KRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
++ +S D +S+G + + LL G PF KT+D E+ R + S S
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPE 420
Query: 331 AKDFVKKLLVKDPRARL 347
+ ++ LL +D RL
Sbjct: 421 LRSLLEGLLQRDVNRRL 437
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V AF + + ++L GG+L + + ++E D +++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEH 307
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
H +V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEVL
Sbjct: 308 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVL 362
Query: 274 KRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
++ +S D +S+G + + LL G PF KT+D E+ R + S S
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPE 420
Query: 331 AKDFVKKLLVKDPRARL 347
+ ++ LL +D RL
Sbjct: 421 LRSLLEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+++ +++G G FG Y G A+K ++K ++ + E + +I+ +L
Sbjct: 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLALNERIMLSLVSTG 249
Query: 158 N---VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE 214
+ +V AF + + ++L GG+L + + ++E D +++
Sbjct: 250 DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEH 307
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL 273
H +V+RD+KP N L E ++ +D GL+ DF K KK VG+ Y+APEVL
Sbjct: 308 MHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVL 362
Query: 274 KRKSGPES--DVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 330
++ +S D +S+G + + LL G PF KT+D E+ R + S S
Sbjct: 363 QKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLTMAVELPDSFSPE 420
Query: 331 AKDFVKKLLVKDPRARL 347
+ ++ LL +D RL
Sbjct: 421 LRSLLEGLLQRDVNRRL 437
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K ++ A++++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQL 120
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L S + +K DFGLS +++ + G
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTXXKASKGKLPIK 177
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
++APE + R+ SDVW GV + IL+ G +PF
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGFVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G YV K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 94
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E A V++ ++++
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLYMATQISSAMEYLEKKNF 151
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLKRKS 277
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L +
Sbjct: 152 IHRDLAARNCL---VGENHVVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 278 -GPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 208 FSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E A V++ ++++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G F G+ + + APE L K
Sbjct: 131 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---- 266
G VHRD+ N L S + K +DFGL G+ +D +AY
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGL------GRVLEDDPEAAYTTRG 209
Query: 267 ------YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 210 GKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 76
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 134 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 77
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 135 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++ M
Sbjct: 241 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--- 297
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
VE+ +E +++ + H N+V+ + YI E G LLD + ++
Sbjct: 298 -EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ 352
Query: 198 EKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
E +A V++ ++++ +HR++ N L E+ +K DFGLS +
Sbjct: 353 EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENHLVKVADFGLSRLMT- 408
Query: 255 GKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
G + G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 409 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 459
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 138 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 133 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 103/224 (45%), Gaps = 22/224 (9%)
Query: 87 DFGYDK-DFDRR-YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK 144
D YDK + +R T+ LG GQ+G Y K VAVK ++++ M VE+
Sbjct: 4 DPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFL 59
Query: 145 REVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
+E +++ + H N+V+ + YI E G LLD + ++ E +A V+
Sbjct: 60 KEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVL 115
Query: 205 VRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+ ++++ +HRD+ N L E+ +K DFGLS + G +
Sbjct: 116 LYMATQISSAMEYLEKKNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAH 171
Query: 262 VGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 172 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 104/231 (45%), Gaps = 26/231 (11%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++ M
Sbjct: 199 KPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--- 255
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
VE+ +E +++ + H N+V+ + YI E G LLD + ++
Sbjct: 256 -EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ 310
Query: 198 EKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
E +A V++ ++++ +HR++ N L E+ +K DFGLS +
Sbjct: 311 EVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENHLVKVADFGLSRLMT- 366
Query: 255 GKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
G + G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 367 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 417
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 79
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 136
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 137 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 193 FSIKSDVWAFGVLLWEIATYGMSPY 217
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ I +++ ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 133 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI +E G LLD + ++ E A V++ ++++
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 133 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 11 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 64
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K ++ A++++
Sbjct: 65 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQL 120
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L + +K DFGLS +++ ++ G
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKASKGKLPIK 177
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
++APE + R+ SDVW GV + IL+ G +PF
Sbjct: 178 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGAVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 46 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 98
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 99 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 156
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 157 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 261
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI +E G LLD + ++ E A V++ ++++
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 133 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 118/298 (39%), Gaps = 42/298 (14%)
Query: 86 TDFGYDK--DFDR-RYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD +F R R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 10 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 67
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 195
E + E+K+L L H N+V A + E C G+LL+ + K+DS
Sbjct: 68 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 125
Query: 196 YTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239
K + ++ Q+ + A +HRD+ N L +
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT- 184
Query: 240 SLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGPESDVWSIGVITYILL 294
K DFGL+ IK + + G+A ++APE + ESDVWS G+ + L
Sbjct: 185 --KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 241
Query: 295 -CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
G P+ D F +++ K FR D +K DP R T Q
Sbjct: 242 SLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 297
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 99/219 (45%), Gaps = 20/219 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I L+G G FG A D+ + VA+K I+ K L + EV++L+ + H
Sbjct: 55 RYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL----NQAQIEVRLLELMNKH 110
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDR----ILAKKDSR-----YTEKDAAVVVRQ 207
+ +K+Y ++++ LC E+L +L + R T K A +
Sbjct: 111 DTEMKYYIVHLKRHFMF-RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 267
+L +A ++H D+KPEN L + K ++K DFG S + G++ + S +Y
Sbjct: 170 LLFLATP--ELSIIHCDLKPENILLCNPKR-XAIKIVDFGSS--CQLGQRIYQXIQSRFY 224
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTE 305
+PEV L D+WS+G I + G F E
Sbjct: 225 RSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANE 263
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 117/298 (39%), Gaps = 42/298 (14%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD ++ R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 28 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 85
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 195
E + E+K+L L H N+V A + E C G+LL+ + K+DS
Sbjct: 86 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 143
Query: 196 YTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239
K + ++ Q+ + A +HRD+ N L +
Sbjct: 144 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT- 202
Query: 240 SLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGPESDVWSIGVITYILL 294
K DFGL+ IK + + G+A ++APE + ESDVWS G+ + L
Sbjct: 203 --KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 259
Query: 295 -CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
G P+ D F +++ K FR D +K DP R T Q
Sbjct: 260 SLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 315
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 88
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 145
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 146 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 202 FSIKSDVWAFGVLLWEIATYGMSPY 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 55/254 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+G+ +G G FG + +A+ VAVK + + P +E +IL+ + H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPN 173
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ----MLRVAAE 214
+V+ +YI MEL +GG+ L L + +R K +V M + ++
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-------- 266
C +HRD+ N L E + LK +DFG+S ++ D V +A
Sbjct: 233 C----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEADGVXAASGGLRQVPV 279
Query: 267 -YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+ APE L + ESDVWS G++ W+ G P+
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGIL----------LWETFSLGA-------------SPY 316
Query: 325 PSISN-SAKDFVKK 337
P++SN ++FV+K
Sbjct: 317 PNLSNQQTREFVEK 330
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 117/298 (39%), Gaps = 42/298 (14%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD ++ R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 33 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 90
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 195
E + E+K+L L H N+V A + E C G+LL+ + K+DS
Sbjct: 91 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 148
Query: 196 YTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239
K + ++ Q+ + A +HRD+ N L +
Sbjct: 149 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT- 207
Query: 240 SLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGPESDVWSIGVITYILL 294
K DFGL+ IK + + G+A ++APE + ESDVWS G+ + L
Sbjct: 208 --KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 264
Query: 295 -CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
G P+ D F +++ K FR D +K DP R T Q
Sbjct: 265 SLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 320
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 71
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 72 GQF-DHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 19 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 71
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 72 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 130 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 186
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 234
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 77
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 134
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 135 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 191 FSIKSDVWAFGVLLWEIATYGMSPY 215
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 18 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 71
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQMLRVAAECHLHGL 220
+ + + E E G L D + ++ E + V M + C +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----V 127
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV +
Sbjct: 128 IHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFSR 183
Query: 277 SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 184 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 96/217 (44%), Gaps = 25/217 (11%)
Query: 93 DFDRR--YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----E 146
+FD R G G G FG Y N VAVKK+ ++ I E++K+ E
Sbjct: 17 NFDERPISVGGNKXGEGGFGVVYKGY--VNNTTVAVKKL---AAMVDITTEELKQQFDQE 71
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVR 206
+K+ A HEN+V+ D + + + G LLDR+ + +
Sbjct: 72 IKV-XAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIA 130
Query: 207 QMLRVAAE-CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----- 260
Q H + +HRD+K N L A + K +DFGL+ + +KF
Sbjct: 131 QGAANGINFLHENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQXVXXS 184
Query: 261 -IVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 296
IVG+ Y APE L+ + P+SD++S GV+ ++ G
Sbjct: 185 RIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIITG 221
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 96/216 (44%), Gaps = 25/216 (11%)
Query: 97 RYTIGKLLGHGQFGYTY--VATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
R +G+ +G GQFG + + N K KN D RE + +AL
Sbjct: 391 RIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKN------CTSDSVREKFLQEALT 444
Query: 155 ----GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++VK +N V+I MELC GEL + +K ++ A++++
Sbjct: 445 MRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRK---FSLDLASLILYAYQL 500
Query: 211 VAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAY 266
A +L VHRD+ N L + +K DFGLS +++ ++ G
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSAT---DCVKLGDFGLSRYMEDSTYYKASKGKLPIK 557
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
++APE + R+ SDVW GV + IL+ G +PF
Sbjct: 558 WMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 98/208 (47%), Gaps = 18/208 (8%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T+ K LG GQFG + K D VAVK I++ M + ++ +E + + L+ H
Sbjct: 11 TLLKELGSGQFGVVKLGKWKGQYD-VAVKMIKEGSM----SEDEFFQEAQTMMKLS-HPK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHL 217
+VKFY + +YI E G LL+ + + + E + + + A
Sbjct: 65 LVKFYGVCSKEYPIYIVTEYISNGCLLNYL--RSHGKGLEPSQLLEMCYDVCEGMAFLES 122
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK 274
H +HRD+ N L D +K +DFG++ ++ ++ VG+ + + APEV
Sbjct: 123 HQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFH 178
Query: 275 R-KSGPESDVWSIGVITY-ILLCGRRPF 300
K +SDVW+ G++ + + G+ P+
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPY 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 77 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 129
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 189
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 246
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 247 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 306
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 307 PGIPVEELFK 316
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 116
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
A + +V I MEL EGG L I K+ E A + Q L H ++H
Sbjct: 117 GAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 174
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVGSAYYVAPE-VLKRK 276
D+K +N L S ++L DFG + ++P GK I G+ ++APE V+ +
Sbjct: 175 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 232
Query: 277 SGPESDVWSIGVITYILLCGRRPF 300
+ D+WS + +L G P+
Sbjct: 233 CDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 26/231 (11%)
Query: 84 KRTDFGYDKDFDRR------YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP 137
K T +G ++D+ T+ LG GQ+G Y K VAVK ++++ M
Sbjct: 202 KPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--- 258
Query: 138 IAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
VE+ +E +++ + H N+V+ + YI E G LLD + ++
Sbjct: 259 -EVEEFLKEAAVMKEIK-HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQ 313
Query: 198 EKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 254
E A V++ ++++ +HR++ N L E+ +K DFGLS +
Sbjct: 314 EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL---VGENHLVKVADFGLSRLMT- 369
Query: 255 GKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 300
G + G+ + + APE L K +SDVW+ GV+ + I G P+
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY 420
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQMLRVAAECHLHGL 220
+ + + E E G L D + ++ E + V M + C +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----V 124
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV +
Sbjct: 125 IHRDLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 180
Query: 277 SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 181 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 117/298 (39%), Gaps = 42/298 (14%)
Query: 86 TDFGYDKDFD---RRYTIGKLLGHGQFG-------YTYVATDKANGDRVAVKKIEKNKMI 135
T YD ++ R + GK LG G FG Y + +D A VAVK ++ + +
Sbjct: 26 TQLPYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAM--TVAVKMLKPSAHL 83
Query: 136 LPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSR 195
E + E+K+L L H N+V A + E C G+LL+ + K+DS
Sbjct: 84 --TEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSF 141
Query: 196 YTEKDAAVVVR----------------QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 239
K + ++ Q+ + A +HRD+ N L +
Sbjct: 142 ICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT- 200
Query: 240 SLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPE-VLKRKSGPESDVWSIGVITYILL 294
K DFGL+ IK + + G+A ++APE + ESDVWS G+ + L
Sbjct: 201 --KICDFGLARDIKNDSNYV-VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELF 257
Query: 295 -CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 351
G P+ D F +++ K FR D +K DP R T Q
Sbjct: 258 SLGSSPYPGMPVDSKFYKMI--KEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQ 313
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 20/204 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + DK G + AVKK+ +E + E + A +V Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR---------LEVFRVEELVACAGLSSPRIVPLY 132
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
A + +V I MEL EGG L I K+ E A + Q L H ++H
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLI--KQMGCLPEDRALYYLGQALEGLEYLHTRRILHG 190
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQD---IVGSAYYVAPE-VLKRK 276
D+K +N L S ++L DFG + ++P GK I G+ ++APE V+ +
Sbjct: 191 DVKADNVLLSSDGSRAAL--CDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP 248
Query: 277 SGPESDVWSIGVITYILLCGRRPF 300
+ D+WS + +L G P+
Sbjct: 249 CDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 138 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 13 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 66
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQMLRVAAECHLHGL 220
+ + + E E G L D + ++ E + V M + C +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----V 122
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV +
Sbjct: 123 IHRDLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 178
Query: 277 SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 179 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I K++G G+FG K G R VA+K ++ + +R+ ++ G
Sbjct: 33 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG------YTDKQRRDFLSEASIMGQ 86
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++ V I E E G L D L K D R+T ++R +
Sbjct: 87 FDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVA 269
VHRD+ N L S + K +DFG+S ++ P + G + A
Sbjct: 146 YLSDMSAVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 202
Query: 270 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
PE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 203 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 247
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I K++G G+FG K G R VA+K ++ + +R+ ++ G
Sbjct: 18 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG------YTDKQRRDFLSEASIMGQ 71
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++ V I E E G L D L K D R+T ++R +
Sbjct: 72 FDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVA 269
VHRD+ N L S + K +DFG+S ++ P + G + A
Sbjct: 131 YLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 187
Query: 270 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
PE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 188 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 232
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E A V++ ++++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 133 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 16 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 69
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQMLRVAAECHLHGL 220
+ + + E E G L D + ++ E + V M + C +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----V 125
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV +
Sbjct: 126 IHRDLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 181
Query: 277 SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 182 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 95/225 (42%), Gaps = 22/225 (9%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQALAG- 155
I K++G G+FG K G R VA+K ++ + +R+ ++ G
Sbjct: 12 IEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAG------YTDKQRRDFLSEASIMGQ 65
Query: 156 --HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
H N++ V I E E G L D L K D R+T ++R +
Sbjct: 66 FDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLRGIGSGMK 124
Query: 214 ECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAYYVA 269
VHRD+ N L S + K +DFG+S ++ P + G + A
Sbjct: 125 YLSDMSYVHRDLAARNILVNS---NLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTA 181
Query: 270 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
PE + RK SDVWS G++ + ++ G RP+WD + + K +
Sbjct: 182 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAI 226
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E A V++ ++++
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 133 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 189 FSIKSDVWAFGVLLWEIATYGMSPY 213
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+A+ +D+++ I E C GG L D I + S + E + ++ Q+ R H LV
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 135
Query: 222 HRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDF--IKPGKKFQDIVGSAYYV 268
H D+KP N F+ +++ +++ + D F + D + Q G + ++
Sbjct: 136 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFL 195
Query: 269 APEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGIFKEVLRNKPDFR 320
A EVL+ P++D++++ +T + G P W + G + +
Sbjct: 196 ANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQ------ 248
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+S + +K ++ DP R +A + H
Sbjct: 249 -----VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 108/254 (42%), Gaps = 55/254 (21%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
+G+ +G G FG + +A+ VAVK + + P +E +IL+ + H N
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYS-HPN 173
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ----MLRVAAE 214
+V+ +YI MEL +GG+ L L + +R K +V M + ++
Sbjct: 174 IVRLIGVCTQKQPIYIVMELVQGGDFLT-FLRTEGARLRVKTLLQMVGDAAAGMEYLESK 232
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-------- 266
C +HRD+ N L E + LK +DFG+S ++ D V +A
Sbjct: 233 C----CIHRDLAARNCL---VTEKNVLKISDFGMS------REEADGVYAASGGLRQVPV 279
Query: 267 -YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 324
+ APE L + ESDVWS G++ W+ G P+
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGIL----------LWETFSLGA-------------SPY 316
Query: 325 PSISN-SAKDFVKK 337
P++SN ++FV+K
Sbjct: 317 PNLSNQQTREFVEK 330
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEED 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 17 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 75
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+A+ +D+++ I E C GG L D I + S + E + ++ Q+ R H LV
Sbjct: 76 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 135
Query: 222 HRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDF--IKPGKKFQDIVGSAYYV 268
H D+KP N F+ +++ +++ + D F + D + Q G + ++
Sbjct: 136 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFL 195
Query: 269 APEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGIFKEVLRNKPDFR 320
A EVL+ P++D++++ +T + G P W + G + +
Sbjct: 196 ANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQ------ 248
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+S + +K ++ DP R +A + H
Sbjct: 249 -----VLSQEFTELLKVMIHPDPERRPSAMALVKH 278
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E A V++ ++++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 137
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G + G+ + + APE L K
Sbjct: 138 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 19 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 77
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+A+ +D+++ I E C GG L D I + S + E + ++ Q+ R H LV
Sbjct: 78 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137
Query: 222 HRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDF--IKPGKKFQDIVGSAYYV 268
H D+KP N F+ +++ +++ + D F + D + Q G + ++
Sbjct: 138 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFL 197
Query: 269 APEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGIFKEVLRNKPDFR 320
A EVL+ P++D++++ +T + G P W + G + +
Sbjct: 198 ANEVLQENYTHLPKADIFALA-LTVVCAAGAEPLPRNGDQWHEIRQGRLPRIPQ------ 250
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+S + +K ++ DP R +A + H
Sbjct: 251 -----VLSQEFTELLKVMIHPDPERRPSAMALVKH 280
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 18 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 70
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 130
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 131 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVL---VTENNVMKIAD 187
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 188 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 247
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 248 PGIPVEELFK 257
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I++ M + +D E +++ L+ H +V+ Y
Sbjct: 35 IGSGQFGLVHLGY-WLNKDKVAIKTIKEGSM----SEDDFIEEAEVMMKLS-HPKLVQLY 88
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV---VVRQMLRVAAECHLHGL 220
+ + + E E G L D + ++ E + V M + C +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC----V 144
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV +
Sbjct: 145 IHRDLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSR 200
Query: 277 SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 201 YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 96/213 (45%), Gaps = 16/213 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
+Y +G+ +G G FG Y+ + A+G+ VA+K +E K P + E K + + G
Sbjct: 10 KYRLGRKIGSGSFGDIYLGANIASGEEVAIK-LECVKTKHP----QLHIESKFYKMMQGG 64
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ + +Y + MEL G L+ + +++ K ++ QM+ H
Sbjct: 65 VGIPSIKWCGAEGDYNVMVMELL--GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH 122
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYYV 268
+HRD+KP+NFL K+ + + DFGL+ + P ++ +++ G+A Y
Sbjct: 123 SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYA 182
Query: 269 APEV-LKRKSGPESDVWSIGVITYILLCGRRPF 300
+ L + D+ S+G + G P+
Sbjct: 183 SINTHLGIEQSRRDDLESLGYVLMYFNLGSLPW 215
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 94/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 76
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI +E G LLD + ++ E +A V++ ++++
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 133
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G G+ + + APE L K
Sbjct: 134 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 190 FSIKSDVWAFGVLLWEIATYGMSPY 214
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 121/275 (44%), Gaps = 36/275 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + +G A+K+ K + + ++ REV L H +VV+++
Sbjct: 15 IGSGEFGSVFKCVKRLDGCIYAIKR-SKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYF 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+A+ +D+++ I E C GG L D I + S + E + ++ Q+ R H LV
Sbjct: 74 SAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 133
Query: 222 HRDMKPEN-FLFKSAKEDSSLKATD----------FGLSDF--IKPGKKFQDIVGSAYYV 268
H D+KP N F+ +++ +++ + D F + D + Q G + ++
Sbjct: 134 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVEEGDSRFL 193
Query: 269 APEVLKRKSG--PESDVWSIGVITYILLCGRRPF------WDKTEDGIFKEVLRNKPDFR 320
A EVL+ P++D++++ +T + G P W + G + +
Sbjct: 194 ANEVLQENYTHLPKADIFALA-LTVVXAAGAEPLPRNGDQWHEIRQGRLPRIPQ------ 246
Query: 321 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 355
+S + +K ++ DP R +A + H
Sbjct: 247 -----VLSQEFTELLKVMIHPDPERRPSAMALVKH 276
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 17/224 (7%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
++ +G+ +G G FG Y+ T+ + VA+K +E K P + + K +ILQ G
Sbjct: 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK-LENVKTKHPQLLYESK-IYRILQGGTGI 65
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
NV F E D Y + M+L G L+ + + + K ++ QM+ H
Sbjct: 66 PNVRWF--GVEGD-YNVLVMDLL--GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH 120
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--------PGKKFQDIVGSAYYV 268
+HRD+KP+NFL + + + DFGL+ + P ++ +++ G+A Y
Sbjct: 121 SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYA 180
Query: 269 APEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 311
+ L + D+ S+G + L G P W + G K+
Sbjct: 181 SVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTKKQ 223
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 20 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 72
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 132
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 133 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 189
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 190 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 249
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 250 PGIPVEELFK 259
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 97/228 (42%), Gaps = 26/228 (11%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDR---VAVKKI-----EKNKMILPIAVEDVKREVKIL 150
+I K++G G+FG K + VA+K + EK + D E I+
Sbjct: 48 SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQR-------RDFLGEASIM 100
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H N+++ V I E E G L D L K D+++T ++R +
Sbjct: 101 GQF-DHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGL+ ++ P + G
Sbjct: 159 GMKYLSDMGYVHRDLAARNILINS---NLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ +PE + RK SDVWS G++ + ++ G RP+W+ + + K V
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAV 263
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G++VAVK ++ IA D+K+E++IL+ L HEN+
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLY-HENI 73
Query: 160 VKFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK+ +D N + + ME G L L K ++ K Q+ +
Sbjct: 74 VKYKGICTEDGGNGIKLIMEFLPSGSL-KEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 132
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVL 273
VHRD+ N L +S + +K DFGL+ I+ K+ D ++ APE L
Sbjct: 133 RQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 189
Query: 274 -KRKSGPESDVWSIGVITYILL 294
+ K SDVWS GV + LL
Sbjct: 190 MQSKFYIASDVWSFGVTLHELL 211
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 23 EFPRDKLTLGKPLGEGCFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 75
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 135
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 136 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 192
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 193 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 252
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 253 PGIPVEELFK 262
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQFG Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E A V++ ++++
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G G+ + + APE L K
Sbjct: 131 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 92/202 (45%), Gaps = 18/202 (8%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G++VAVK ++ IA D+K+E++IL+ L HEN+
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIA--DLKKEIEILRNLY-HENI 85
Query: 160 VKFYNAFEDD--NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
VK+ +D N + + ME G L L K ++ K Q+ +
Sbjct: 86 VKYKGICTEDGGNGIKLIMEFLPSGSL-KEYLPKNKNKINLKQQLKYAVQICKGMDYLGS 144
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVL 273
VHRD+ N L +S + +K DFGL+ I+ K+ D ++ APE L
Sbjct: 145 RQYVHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL 201
Query: 274 -KRKSGPESDVWSIGVITYILL 294
+ K SDVWS GV + LL
Sbjct: 202 MQSKFYIASDVWSFGVTLHELL 223
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 109/256 (42%), Gaps = 31/256 (12%)
Query: 104 LGHGQFGYTYVATDKANGD-RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG G FG ++ T NG RVA+K ++ M + E +E ++++ L HE +V+
Sbjct: 16 LGQGCFGEVWMGT--WNGTTRVAIKTLKPGTM----SPEAFLQEAQVMKKLR-HEKLVQL 68
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLV 221
Y ++ + I E G LLD L + +Y V + Q+ A V
Sbjct: 69 YAVVSEEP-IXIVTEYMSKGSLLD-FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-L 273
HRD++ N L E+ K DFGL+ I + G KF + APE L
Sbjct: 127 HRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF-----PIKWTAPEAAL 178
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 332
+ +SDVWS G+ +T + GR P+ + +V R +R P S
Sbjct: 179 YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLH 235
Query: 333 DFVKKLLVKDPRARLT 348
D + + K+P R T
Sbjct: 236 DLMCQCWRKEPEERPT 251
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 101/214 (47%), Gaps = 16/214 (7%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G GQFG ++ N D+VA+K I + M + ED E +++ L+ H +V+ Y
Sbjct: 15 IGSGQFGLVHLGY-WLNKDKVAIKTIREGAM----SEEDFIEEAEVMMKLS-HPKLVQLY 68
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 223
+ + + E E G L D + ++ E + + + A ++HR
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCL-DVCEGMAYLEEASVIHR 127
Query: 224 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RKSGP 279
D+ N L E+ +K +DFG++ F+ ++ G+ + + +PEV +
Sbjct: 128 DLAARNCL---VGENQVIKVSDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSS 183
Query: 280 ESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 312
+SDVWS GV+ + + G+ P+ +++ + +++
Sbjct: 184 KSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 110/250 (44%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ +E G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ ++ D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMRIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 114/266 (42%), Gaps = 34/266 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDK-ANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG 155
+Y + + HG G+ Y+A D+ NG V +K + + A+ +R+ A
Sbjct: 81 QYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQ---FLAEVV 137
Query: 156 HENVVKFYNAFE-----DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
H ++V+ +N E D YI ME GG+ L R K + +A + ++L
Sbjct: 138 HPSIVQIFNFVEHTDRHGDPVGYIVMEYV-GGQSLKR---SKGQKLPVAEAIAYLLEILP 193
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAP 270
+ H GLV+ D+KPEN + + LK D G I F + G+ + AP
Sbjct: 194 ALSYLHSIGLVYNDLKPENIMLT----EEQLKLIDLGAVSRI---NSFGYLYGTPGFQAP 246
Query: 271 EVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE--VLRNKPDFRRKPWPSIS 328
E+++ +D++++G L + DG+ ++ VL+ + R
Sbjct: 247 EIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGR------- 299
Query: 329 NSAKDFVKKLLVKDPRARLTAAQALS 354
+++ + DPR R T A+ +S
Sbjct: 300 -----LLRRAIDPDPRQRFTTAEEMS 320
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 80
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI E G LLD + ++ E +A V++ ++++
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNF 137
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G G+ + + APE L K
Sbjct: 138 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 194 FSIKSDVWAFGVLLWEIATYGMSPY 218
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 93/205 (45%), Gaps = 20/205 (9%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
LG GQ+G Y K VAVK ++++ M VE+ +E +++ + H N+V+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIK-HPNLVQLL 73
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL---HGL 220
+ YI +E G LLD + ++ E A V++ ++++
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNF 130
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-RK 276
+HRD+ N L E+ +K DFGLS + G G+ + + APE L K
Sbjct: 131 IHRDLAARNCL---VGENHLVKVADFGLSRLMT-GDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 277 SGPESDVWSIGVITY-ILLCGRRPF 300
+SDVW+ GV+ + I G P+
Sbjct: 187 FSIKSDVWAFGVLLWEIATYGMSPY 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 92/228 (40%), Gaps = 22/228 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
R I K++G G G + G R VA+K ++ E +R+ ++
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY------TERQRRDFLSEASI 103
Query: 154 AG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
G H N+++ I E E G L D L D ++T ++R +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGA 162
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P + G
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR 219
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ APE + R SDVWS GV+ + +L G RP+W+ T + V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 80/329 (24%)
Query: 97 RYTIGKLLGHGQFGYTYVATD-KANGDRVA---VKKIEKNKMILPIAVEDVKREVKILQA 152
RY I LG G FG D + G RVA +K +EK K E + E+ +L+
Sbjct: 34 RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK-------EAARLEINVLEK 86
Query: 153 L----AGHENV-VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQ 207
+ ++N+ V+ ++ F+ ++ I+ EL G D + Y + Q
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQ 145
Query: 208 MLRVAAECHLHGLVHRDMKPENFLFKSA-----------KEDSSLKAT-----DFGLSDF 251
+ + H + L H D+KPEN LF ++ +++ S+K+T DFG + F
Sbjct: 146 LCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSATF 205
Query: 252 IKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTED---- 306
+ IV + +Y APEV L+ DVWSIG I + G F +T D
Sbjct: 206 --DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF--QTHDNREH 261
Query: 307 -GIFKEVLRNKPD------------FR-RKPWPSISNSAK-------------------- 332
+ + +L P +R R W +++ +
Sbjct: 262 LAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEEH 321
Query: 333 ----DFVKKLLVKDPRARLTAAQALSHPW 357
D ++ +L +P RLT +AL HP+
Sbjct: 322 HQLFDLIESMLEYEPAKRLTLGEALQHPF 350
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 29/257 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG+GQFG ++ T N +VA+K ++ M + E E +I++ L H+ +V+
Sbjct: 15 KRLGNGQFGEVWMGTWNGN-TKVAIKTLKPGTM----SPESFLEEAQIMKKLK-HDKLVQ 68
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y A + +YI E G LLD + + + + Q+ A +
Sbjct: 69 LY-AVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYI 127
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPE-VL 273
HRD++ N L + K DFGL+ I + G KF + APE L
Sbjct: 128 HRDLRSANILVGNG---LICKIADFGLARLIEDNEXTARQGAKF-----PIKWTAPEAAL 179
Query: 274 KRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSA 331
+ +SDVWS G+ +T ++ GR P+ + ++V R R P P S
Sbjct: 180 YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERG----YRMPCPQDCPISL 235
Query: 332 KDFVKKLLVKDPRARLT 348
+ + KDP R T
Sbjct: 236 HELMIHCWKKDPEERPT 252
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 111/272 (40%), Gaps = 35/272 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G +G +AVK+I + ++ KR ++ I V
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT-----VNSQEQKRLLMDLDISMRTVDCPFTV 113
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC----- 215
FY A + V+I MEL +D L K + +K + + ++A
Sbjct: 114 TFYGALFREGDVWICMEL------MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 167
Query: 216 HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
HLH ++HRD+KP N L + + +K DFG+S ++ G Y+APE
Sbjct: 168 HLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPYMAPER 224
Query: 273 L-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWP 325
+ ++ +SD+WS+G+ L R P+ W + + V P P
Sbjct: 225 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PAD 281
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
S DF + L K+ + R T + + HP+
Sbjct: 282 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV-------RQML 209
EN+V A V + E C G+LL+ + ++ SR E D A + R +L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTLSTRDLL 167
Query: 210 RVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+++ G+ +HRD+ N L + K DFGL+ I + +
Sbjct: 168 HFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI-V 222
Query: 262 VGSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
G+A ++APE + +SDVWS G++ + I G P+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 98/225 (43%), Gaps = 33/225 (14%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV-------RQML 209
EN+V A V + E C G+LL+ + ++ SR E D A + R +L
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFL--RRKSRVLETDPAFAIANSTASTRDLL 167
Query: 210 RVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
+++ G+ +HRD+ N L + K DFGL+ I + +
Sbjct: 168 HFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI-V 222
Query: 262 VGSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
G+A ++APE + +SDVWS G++ + I G P+
Sbjct: 223 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 267
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 7 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 60
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 61 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 120 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMY 175
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYSLGKMPY 202
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 11 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 64
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 65 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 123
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 124 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMY 179
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYSLGKMPY 206
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ + G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 125 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMY 180
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 126/285 (44%), Gaps = 52/285 (18%)
Query: 96 RRYTIGKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKIL 150
R + + LG G FG ++A + + VAVK ++ + A +D +RE ++L
Sbjct: 15 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLA---ARKDFQREAELL 71
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK-------DSRYTEKDAAV 203
L HE++VKFY D + + + E + G+L + A D + + +
Sbjct: 72 TNLQ-HEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGEL 130
Query: 204 VVRQMLRVAAE-----CHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 256
+ QML +A++ +L VHRD+ N L + + +K DFG+S
Sbjct: 131 GLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGDFGMS------- 180
Query: 257 KFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 302
+D+ + YY + PE ++ RK ESDVWS GVI + I G++P++
Sbjct: 181 --RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQ 238
Query: 303 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 347
+ + + + + + R + P D + ++P+ RL
Sbjct: 239 LSNTEVIECITQGRVLERPRVCP---KEVYDVMLGCWQREPQQRL 280
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 18 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 71
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 72 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 130
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 131 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLD-DEYTSSVGSKFPVRWSPPEVLMY 186
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 187 SKFSSKSDIWAFGVLMWEIYSLGKMPY 213
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 111/272 (40%), Gaps = 35/272 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G +G +AVK+I + ++ KR ++ I V
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRAT-----VNSQEQKRLLMDLDISMRTVDCPFTV 69
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC----- 215
FY A + V+I MEL +D L K + +K + + ++A
Sbjct: 70 TFYGALFREGDVWICMEL------MDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123
Query: 216 HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
HLH ++HRD+KP N L + + +K DFG+S ++ G Y+APE
Sbjct: 124 HLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPYMAPER 180
Query: 273 L-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWP 325
+ ++ +SD+WS+G+ L R P+ W + + V P P
Sbjct: 181 INPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PAD 237
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
S DF + L K+ + R T + + HP+
Sbjct: 238 KFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L H
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQH 109
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-------LAKKDSRYTE-KDAAVVVRQM 208
EN+V A V + E C G+LL+ + L K+D R E +D Q+
Sbjct: 110 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 169
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 266
+ A +HRD+ N L + K DFGL+ I + + G+A
Sbjct: 170 AQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI-VKGNARLP 225
Query: 267 --YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
++APE + +SDVWS G++ + I G P+
Sbjct: 226 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 263
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 80
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 140 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMY 195
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 94/218 (43%), Gaps = 23/218 (10%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L H
Sbjct: 43 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQH 101
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRI-------LAKKDSRYTE-KDAAVVVRQM 208
EN+V A V + E C G+LL+ + L K+D R E +D Q+
Sbjct: 102 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQV 161
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY-- 266
+ A +HRD+ N L + K DFGL+ I + + G+A
Sbjct: 162 AQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNYI-VKGNARLP 217
Query: 267 --YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
++APE + +SDVWS G++ + I G P+
Sbjct: 218 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 255
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 92/201 (45%), Gaps = 20/201 (9%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 188 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 241
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ + +YI E G LLD + + + S+ Q+ A +
Sbjct: 242 LHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 300
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPE 280
HRD++ N L ++ K DFGL+ + G KF + APE + S +
Sbjct: 301 HRDLRAANILVSASL---VCKIADFGLA---RVGAKF-----PIKWTAPEAINFGSFTIK 349
Query: 281 SDVWSIGVITY-ILLCGRRPF 300
SDVWS G++ I+ GR P+
Sbjct: 350 SDVWSFGILLMEIVTYGRIPY 370
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ N +VAVK ++ M +V+ E +++ L H+ +V+
Sbjct: 19 KRLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 72
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y + +YI E G LLD + + + + Q+ A +
Sbjct: 73 LYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 132
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLK 274
HRD++ N L E K DFGL+ I + G KF + APE +
Sbjct: 133 HRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF-----PIKWTAPEAIN 184
Query: 275 RKS-GPESDVWSIGVITY-ILLCGRRPFWDKT 304
+SDVWS G++ Y I+ G+ P+ +T
Sbjct: 185 FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRT 216
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 42/250 (16%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVE---------- 141
+F R + T+GK LG G FG +A + V + K +K K + +AV+
Sbjct: 31 EFPRDKLTLGKPLGEGAFGQVVMA------EAVGIDK-DKPKEAVTVAVKMLKDDATEKD 83
Query: 142 --DVKREVKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK------- 192
D+ E+++++ + H+N++ A D +Y+ + G L + + A++
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS 143
Query: 193 -------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 245
+ + T KD Q+ R +HRD+ N L E++ +K D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVL---VTENNVMKIAD 200
Query: 246 FGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
FGL+ + I KK + ++APE L R +SDVWS GV+ + I G P+
Sbjct: 201 FGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPY 260
Query: 301 WDKTEDGIFK 310
+ +FK
Sbjct: 261 PGIPVEELFK 270
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 115/244 (47%), Gaps = 37/244 (15%)
Query: 90 YDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVK--KIEKNKMILPIAVEDVKREV 147
+D F++ IG+L+G G+FG Y + +G+ VA++ IE++ ++ KREV
Sbjct: 28 WDIPFEQ-LEIGELIGKGRFGQVY--HGRWHGE-VAIRLIDIERDN---EDQLKAFKREV 80
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK---DSRYTEKDAAVV 204
+ HENVV F A ++ I LC+G L + K D T + A +
Sbjct: 81 MAYRQ-TRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---SDFIKPGK---KF 258
V+ M H G++H+D+K +N + + K + TDFGL S ++ G+ K
Sbjct: 140 VKGM----GYLHAKGILHKDLKSKNVFYDNGK----VVITDFGLFSISGVLQAGRREDKL 191
Query: 259 QDIVGSAYYVAPEVLKRKS----------GPESDVWSIGVITYILLCGRRPFWDKTEDGI 308
+ G ++APE++++ S SDV+++G I Y L PF + + I
Sbjct: 192 RIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAI 251
Query: 309 FKEV 312
++
Sbjct: 252 IWQM 255
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 91/228 (39%), Gaps = 22/228 (9%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDR---VAVKKIEKNKMILPIAVEDVKREVKILQAL 153
R I K++G G G + G R VA+K ++ E +R+ ++
Sbjct: 50 RIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY------TERQRRDFLSEASI 103
Query: 154 AG---HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
G H N+++ I E E G L D L D ++T ++R +
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGA 162
Query: 211 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--PGKKFQDIVG--SAY 266
G VHRD+ N L S + K +DFGLS ++ P G
Sbjct: 163 GMRYLSDLGYVHRDLAARNVLVDS---NLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIR 219
Query: 267 YVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 312
+ APE + R SDVWS GV+ + +L G RP+W+ T + V
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 31/234 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++ N +VAVK ++ M +V+ E +++ L H+ +V+
Sbjct: 18 KKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM----SVQAFLEEANLMKTLQ-HDKLVR 71
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
Y + +YI E G LLD + + + + Q+ A +
Sbjct: 72 LYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYI 131
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLK 274
HRD++ N L E K DFGL+ I + G KF + APE +
Sbjct: 132 HRDLRAANVL---VSESLMCKIADFGLARVIEDNEYTAREGAKF-----PIKWTAPEAIN 183
Query: 275 RKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV--------LRNKPD 318
+S+VWS G++ Y I+ G+ P+ +T + + + N PD
Sbjct: 184 FGCFTIKSNVWSFGILLYEIVTYGKIPYPGRTNADVMSALSQGYRMPRMENCPD 237
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 119/323 (36%), Gaps = 68/323 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D G R KI KN + E + E+++L+ L
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTT 71
Query: 157 E-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ V+ FE ++ I EL G D I + + Q+ +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 212 AAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KATDFGLSDFIKPG 255
H + L H D+KPEN LF K +++ +L K DFG + +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DD 188
Query: 256 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGRRPFWDKTED-GIFKE 311
+ +V + +Y APEV L DVWSIG +I Y L P D E + +
Sbjct: 189 EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 312 VLRNKPDFR-------------RKPWPSISNSAK------------------------DF 334
+L P R W S++ + D
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 335 VKKLLVKDPRARLTAAQALSHPW 357
++K+L DP R+T +AL HP+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPF 331
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 31 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 83
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 84 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 142
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 143 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAINY 194
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 195 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 243
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 94/207 (45%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 27 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 80
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 81 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 139
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ VGS + + PEVL
Sbjct: 140 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVLDDEETSS-VGSKFPVRWSPPEVLMY 195
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 196 SKFSSKSDIWAFGVLMWEIYSLGKMPY 222
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 194 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 247
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ + +YI E G LLD + + + S+ Q+ A +
Sbjct: 248 LHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 306
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLK 274
HRD++ N L ++ K DFGL+ I + G KF + APE +
Sbjct: 307 HRDLRAANILVSASL---VCKIADFGLARVIEDNEYTAREGAKF-----PIKWTAPEAIN 358
Query: 275 RKS-GPESDVWSIGVITY-ILLCGRRPF 300
S +SDVWS G++ I+ GR P+
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 27 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 79
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 80 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 138
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 139 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 190
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 29 LGAGQFGEVWMGY--YNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 81
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 82 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 140
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 141 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 192
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 193 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 241
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 24/208 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVK 161
K LG GQFG ++AT + +VAVK ++ M +VE E +++ L H+ +VK
Sbjct: 21 KKLGAGQFGEVWMATYNKH-TKVAVKTMKPGSM----SVEAFLAEANVMKTLQ-HDKLVK 74
Query: 162 FYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 221
+ A +YI E G LLD + + + S+ Q+ A +
Sbjct: 75 LH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYI 133
Query: 222 HRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLK 274
HRD++ N L ++ K DFGL+ I + G KF + APE +
Sbjct: 134 HRDLRAANILVSAS---LVCKIADFGLARVIEDNEYTAREGAKF-----PIKWTAPEAIN 185
Query: 275 RKS-GPESDVWSIGVITY-ILLCGRRPF 300
S +SDVWS G++ I+ GR P+
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 27 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 79
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 80 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 138
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 139 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAINY 190
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 191 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 30 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 82
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 83 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 141
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 142 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 193
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 194 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 242
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAG 155
K +G G FG + + VA+K + + +MI ++ +REV I+ L
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFIMSNL-N 81
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H N+VK Y N + ME G+L R+L K +V +R ML +A
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGI 135
Query: 216 HLH-----GLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYV 268
+VHRD++ N +S E++ + K DFGLS + ++G+ ++
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWM 193
Query: 269 APEVL---KRKSGPESDVWSIGVITYILLCGRRPF 300
APE + + ++D +S +I Y +L G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 26 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 78
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 79 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 137
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 138 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAINY 189
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 190 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 238
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 133 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 184
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 23 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 75
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 76 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 134
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 135 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 186
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 187 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 235
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 22 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 74
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 75 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 133
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 134 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 185
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 186 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 234
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 16 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 68
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 69 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 127
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 128 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAINY 179
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 180 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 228
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 133 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAINY 184
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 133 RDLRAANIL---VSDTLSCKIADFGLARLIEDNEXTAREGAKF-----PIKWTAPEAINY 184
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 32 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 85
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV----------R 206
N++ A E Y+Y+A+E G LLD + + SR E D A + +
Sbjct: 86 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQ 142
Query: 207 QMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
Q+L AA+ G+ +HRD+ N L E+ K DFGLS + K
Sbjct: 143 QLLHFAADVA-RGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSRGQEVYVKK 198
Query: 259 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNK 316
++A E L SDVWS GV+ + I+ G P+ T +++++ +
Sbjct: 199 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 257
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+R + + + D +++ + P R + AQ L
Sbjct: 258 --YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 292
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 22 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 75
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV----------R 206
N++ A E Y+Y+A+E G LLD + + SR E D A + +
Sbjct: 76 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQ 132
Query: 207 QMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
Q+L AA+ G+ +HRD+ N L E+ K DFGLS + K
Sbjct: 133 QLLHFAADVA-RGMDYLSQKQFIHRDLAARNIL---VGENYVAKIADFGLSRGQEVYVKK 188
Query: 259 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNK 316
++A E L SDVWS GV+ + I+ G P+ T +++++ +
Sbjct: 189 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 247
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+R + + + D +++ + P R + AQ L
Sbjct: 248 --YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 282
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 19/235 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +GK +G G FG + + + VA+K +E K P + E + + L+ E
Sbjct: 6 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPIKSRAP----QLHLEYRFYKQLSATE 60
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
V + Y Y + +EL G L+ + D +T K ++ Q++ H
Sbjct: 61 GVPQVYYFGPXGKYNAMVLELL--GPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHT 118
Query: 218 HGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK-------FQDIVGSAYY 267
L++RD+KPENFL K ++ DFGL+ ++I P K + + G+A Y
Sbjct: 119 KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 178
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
++ L ++ D+ ++G + L G P W + KE + D +R
Sbjct: 179 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQKIGDTKR 232
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 118/323 (36%), Gaps = 68/323 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D G R KI KN + E + E+++L+ L
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTT 71
Query: 157 E-----NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ V+ FE ++ I EL G D I + + Q+ +
Sbjct: 72 DPNSTFRCVQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKS 130
Query: 212 AAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KATDFGLSDFIKPG 255
H + L H D+KPEN LF K +++ +L K DFG + +
Sbjct: 131 VNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATY--DD 188
Query: 256 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIG--VITYILLCGRRPFWDKTED-GIFKE 311
+ +V +Y APEV L DVWSIG +I Y L P D E + +
Sbjct: 189 EHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMER 248
Query: 312 VLRNKPDFR-------------RKPWPSISNSAK------------------------DF 334
+L P R W S++ + D
Sbjct: 249 ILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDL 308
Query: 335 VKKLLVKDPRARLTAAQALSHPW 357
++K+L DP R+T +AL HP+
Sbjct: 309 IQKMLEYDPAKRITLREALKHPF 331
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 16/207 (7%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
T K LG GQFG + D VA+K I++ M + ++ E K++ L+ HE
Sbjct: 12 TFLKELGTGQFGVVKYGKWRGQYD-VAIKMIKEGSM----SEDEFIEEAKVMMNLS-HEK 65
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+V+ Y ++I E G LL+ L + R+ + + + +
Sbjct: 66 LVQLYGVCTKQRPIFIITEYMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESK 124
Query: 219 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK- 274
+HRD+ N L + +K +DFGLS ++ ++ GS + + PEVL
Sbjct: 125 QFLHRDLAARNCL---VNDQGVVKVSDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMY 180
Query: 275 RKSGPESDVWSIGVITY-ILLCGRRPF 300
K +SD+W+ GV+ + I G+ P+
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYSLGKMPY 207
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 127/321 (39%), Gaps = 68/321 (21%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
G +G G +G+ Y A K D A+K+IE + + RE+ +L+ L H N
Sbjct: 26 GCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSAC-----REIALLRELK-HPN 79
Query: 159 VVKFYNAF--EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------VVRQML 209
V+ F D V++ + E +L I + S+ +K + ++ Q+L
Sbjct: 80 VISLQKVFLSHADRKVWLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQIL 138
Query: 210 RVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKFQDIVGS 264
H + ++HRD+KP N L E +K D G + +KP +V +
Sbjct: 139 DGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVT 198
Query: 265 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDKTEDGIF 309
+Y APE+L R D+W+IG I LL P+ D IF
Sbjct: 199 FWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIF 258
Query: 310 K----------EVLRNKP-------DFRRKPWPSIS-------------NSAKDFVKKLL 339
E ++ P DFRR + + S + A ++KLL
Sbjct: 259 NVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLL 318
Query: 340 VKDPRARLTAAQALSHPWVRE 360
DP R+T+ QA+ P+ E
Sbjct: 319 TMDPIKRITSEQAMQDPYFLE 339
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 54/256 (21%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK ++ A +D RE ++L L HE+
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS---DNARKDFHREAELLTNLQ-HEH 76
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGEL--------LDRILAKKDSRYTEKDAAVVVRQMLR 210
+VKFY + + + + E + G+L D +L + + TE + QML
Sbjct: 77 IVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS----QMLH 132
Query: 211 VAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 263
+A + VHRD+ N L E+ +K DFG+S +D+
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYS 180
Query: 264 SAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIF 309
+ YY + PE ++ RK ESDVWS+GV+ + I G++P++ + + +
Sbjct: 181 TDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240
Query: 310 KEVLRNKPDFRRKPWP 325
+ + + + R + P
Sbjct: 241 ECITQGRVLQRPRTCP 256
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 73
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 74 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+F + ++ APE
Sbjct: 131 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPE 187
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 100/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQFG ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 17 LGAGQFGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 69
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 70 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 128
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
R+++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 129 RNLRAANIL---VSDTLSCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAINY 180
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 181 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 229
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 104/255 (40%), Gaps = 52/255 (20%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAV------------EDVKREV 147
GK+LG G FG AT A G I K + + +AV E + E+
Sbjct: 49 FGKVLGSGAFGKVMNAT--AYG-------ISKTGVSIQVAVKMLKEKADSSEREALMSEL 99
Query: 148 KILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD-------------- 193
K++ L HEN+V A +Y+ E C G+LL+ + +K++
Sbjct: 100 KMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR 159
Query: 194 -------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 246
+ T +D Q+ + VHRD+ N L K +K DF
Sbjct: 160 LEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGK---VVKICDF 216
Query: 247 GLSDFIKPGKKFQDIVGSAY----YVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPF 300
GL+ I + + G+A ++APE L + +SDVWS G++ + I G P+
Sbjct: 217 GLARDIMSDSNYV-VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
Query: 301 WDKTEDGIFKEVLRN 315
D F ++++N
Sbjct: 276 PGIPVDANFYKLIQN 290
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 68/323 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D A G KI +N + E + E+ +L+ +
Sbjct: 29 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEK 85
Query: 157 ENVVKFYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ KF D ++ IA EL G + + Y + Q+
Sbjct: 86 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 144
Query: 212 AAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPG 255
H + L H D+KPEN LF KS +E ++S++ DFG + F
Sbjct: 145 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DH 202
Query: 256 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFKEV 312
+ IV + +Y PEV L+ DVWSIG I + G F + E + E
Sbjct: 203 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 262
Query: 313 L--------------------------RNKPDFRR-----KPWPS--ISNSAK-----DF 334
+ N D R KP S + +S + D
Sbjct: 263 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 322
Query: 335 VKKLLVKDPRARLTAAQALSHPW 357
++++L DP R+T A+AL HP+
Sbjct: 323 MRRMLEFDPAQRITLAEALLHPF 345
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT----YVATDKANGDRVAVKKIEKNK 133
G++P G ++ +R + LG G FG Y G+ VAVKK++ +
Sbjct: 13 GLVPRGSHNMTQFE---ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 69
Query: 134 MILPIAVEDVKREVKILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRIL 189
+ D +RE++IL++L H+N+VK+ Y+A + + + ME G L D L
Sbjct: 70 ---EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YL 122
Query: 190 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249
K R Q+ + +HRD+ N L ++ ++ +K DFGL+
Sbjct: 123 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLT 179
Query: 250 DFIKPGKKFQDI----VGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 294
+ K+ + ++ APE L + K SDVWS GV+ Y L
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 103 LLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
++G G FG A K +G R+ A+K++++ A +D R E+++L L H
Sbjct: 29 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE------YASKDDHRDFAGELEVLCKLGHH 82
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV----------R 206
N++ A E Y+Y+A+E G LLD + + SR E D A + +
Sbjct: 83 PNIINLLGACEHRGYLYLAIEYAPHGNLLDFL---RKSRVLETDPAFAIANSTASTLSSQ 139
Query: 207 QMLRVAAECHLHGL--------VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
Q+L AA+ G+ +HR++ N L E+ K DFGLS + K
Sbjct: 140 QLLHFAADVA-RGMDYLSQKQFIHRNLAARNIL---VGENYVAKIADFGLSRGQEVYVKK 195
Query: 259 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNK 316
++A E L SDVWS GV+ + I+ G P+ T +++++ +
Sbjct: 196 TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG- 254
Query: 317 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 353
+R + + + D +++ + P R + AQ L
Sbjct: 255 --YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 289
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 121/323 (37%), Gaps = 68/323 (21%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D A G KI +N + E + E+ +L+ +
Sbjct: 52 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEK 108
Query: 157 ENVVKFYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ KF D ++ IA EL G + + Y + Q+
Sbjct: 109 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 167
Query: 212 AAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPG 255
H + L H D+KPEN LF KS +E ++S++ DFG + F
Sbjct: 168 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DH 225
Query: 256 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFKEV 312
+ IV + +Y PEV L+ DVWSIG I + G F + E + E
Sbjct: 226 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
Query: 313 L--------------------------RNKPDFRR-----KPWPS--ISNSAK-----DF 334
+ N D R KP S + +S + D
Sbjct: 286 ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDL 345
Query: 335 VKKLLVKDPRARLTAAQALSHPW 357
++++L DP R+T A+AL HP+
Sbjct: 346 MRRMLEFDPAQRITLAEALLHPF 368
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 28/217 (12%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGH 156
RY I LG G FG D A G KI +N + E + E+ +L+ +
Sbjct: 20 RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEK 76
Query: 157 ENVVKFYNAFEDD-----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ KF D ++ IA EL G + + Y + Q+
Sbjct: 77 DKENKFLCVLMSDWFNFHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHA 135
Query: 212 AAECHLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPG 255
H + L H D+KPEN LF KS +E ++S++ DFG + F
Sbjct: 136 LRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DH 193
Query: 256 KKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 291
+ IV + +Y PEV L+ DVWSIG I +
Sbjct: 194 EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAG 155
K +G G FG + + VA+K + + +MI ++ +REV I+ L
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFIMSNL-N 81
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H N+VK Y N + ME G+L R+L K +V +R ML +A
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGI 135
Query: 216 HLH-----GLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYV 268
+VHRD++ N +S E++ + K DFG S + ++G+ ++
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWM 193
Query: 269 APEVL---KRKSGPESDVWSIGVITYILLCGRRPF 300
APE + + ++D +S +I Y +L G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 26/230 (11%)
Query: 78 GVIPCGKRTDFGYDKDFDRRYTIGKLLGHGQFGYT----YVATDKANGDRVAVKKIEKNK 133
G++P G ++ +R + LG G FG Y G+ VAVKK++ +
Sbjct: 13 GLVPRGSHNMTQFE---ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST 69
Query: 134 MILPIAVEDVKREVKILQALAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRIL 189
+ D +RE++IL++L H+N+VK+ Y+A + + + ME G L D L
Sbjct: 70 ---EEHLRDFEREIEILKSLQ-HDNIVKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YL 122
Query: 190 AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 249
K R Q+ + +HRD+ N L ++ ++ +K DFGL+
Sbjct: 123 QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLT 179
Query: 250 DFIKPGKKFQDI----VGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL 294
+ K+ + ++ APE L + K SDVWS GV+ Y L
Sbjct: 180 KVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKI------EKNKMILPIAVEDVKREVKILQALAG 155
K +G G FG + + VA+K + + +MI ++ +REV I+ L
Sbjct: 25 KQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE--KFQEFQREVFIMSNL-N 81
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
H N+VK Y N + ME G+L R+L K +V +R ML +A
Sbjct: 82 HPNIVKLYGLMH--NPPRMVMEFVPCGDLYHRLLDKAHP----IKWSVKLRLMLDIALGI 135
Query: 216 HLH-----GLVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYV 268
+VHRD++ N +S E++ + K DF LS + ++G+ ++
Sbjct: 136 EYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ--QSVHSVSGLLGNFQWM 193
Query: 269 APEVL---KRKSGPESDVWSIGVITYILLCGRRPF 300
APE + + ++D +S +I Y +L G PF
Sbjct: 194 APETIGAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 93/225 (41%), Gaps = 29/225 (12%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAG 155
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L
Sbjct: 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQ 108
Query: 156 HENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKK--------------DSRYTEKDA 201
HEN+V A V + E C G+LL+ + K+ + + + +D
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 202 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 261
Q+ + A +HRD+ N L + K DFGL+ I + +
Sbjct: 169 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMNDSNY-IV 224
Query: 262 VGSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
G+A ++APE + +SDVWS G++ + I G P+
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 269
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 28/210 (13%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + A + +G VAVK + + V + REV I++ L H N+V F
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLR-HPNIVLFM 100
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HLH 218
A + I E G L R+L K +R + R+ L +A + +LH
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDE-----RRRLSMAYDVAKGMNYLH 154
Query: 219 G----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPE 271
+VHRD+K N L + ++K DFGLS F + G+ ++APE
Sbjct: 155 NRNPPIVHRDLKSPNLL---VDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPE 209
Query: 272 VLK-RKSGPESDVWSIGVITYILLCGRRPF 300
VL+ S +SDV+S GVI + L ++P+
Sbjct: 210 VLRDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 72
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 73 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 129
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 130 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 186
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 187 SLTESKFSVASDVWSFGVVLYELF 210
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 76
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 77 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 134 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 71
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 72 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 128
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 129 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 185
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 186 SLTESKFSVASDVWSFGVVLYELF 209
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 73
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 74 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 131 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 77
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 78 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 134
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 135 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 191
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 192 SLTESKFSVASDVWSFGVVLYELF 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 79
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 80 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 136
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 137 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 193
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 194 SLTESKFSVASDVWSFGVVLYELF 217
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 78
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 79 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 135
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 136 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 192
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 193 SLTESKFSVASDVWSFGVVLYELF 216
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 104
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 105 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 161
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 162 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 218
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 219 SLTESKFSVASDVWSFGVVLYELF 242
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 73
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 74 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 130
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 131 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 187
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 188 SLTESKFSVASDVWSFGVVLYELF 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 80
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 81 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 137
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 138 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 194
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 195 SLTESKFSVASDVWSFGVVLYELF 218
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 74
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D L K R Q+ +
Sbjct: 75 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRD-YLQKHKERIDHIKLLQYTSQICKGMEYL 131
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HR++ N L ++ ++ +K DFGL+ + K++ + ++ APE
Sbjct: 132 GTKRYIHRNLATRNILVEN---ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPE 188
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 189 SLTESKFSVASDVWSFGVVLYELF 212
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 30/229 (13%)
Query: 104 LGHGQFGYTYVATDKANG-DRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKF 162
LG GQ G ++ NG +VAVK +++ M + + E +++ L H+ +V+
Sbjct: 21 LGAGQAGEVWMG--YYNGHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQ-HQRLVRL 73
Query: 163 YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 222
Y + +YI E E G L+D + + T + Q+ A +H
Sbjct: 74 YAVVTQEP-IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIH 132
Query: 223 RDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEVLKR 275
RD++ N L + S K DFGL+ I + G KF + APE +
Sbjct: 133 RDLRAANIL---VSDTLSCKIADFGLARLIEDAEXTAREGAKF-----PIKWTAPEAINY 184
Query: 276 KS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRN----KPD 318
+ +SDVWS G+ +T I+ GR P+ T + + + R +PD
Sbjct: 185 GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 32/228 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 28 RLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDA-------AVV 204
+ H NVV A + + + +E C+ G L + +K++ KD +
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 205 VRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIKP 254
+ +VA +HRD+ N L E + +K DFGL+ D+++
Sbjct: 147 IXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIXDFGLARDIYKDPDYVRK 203
Query: 255 GKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 204 G----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 94/231 (40%), Gaps = 36/231 (15%)
Query: 101 GKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQALAGH 156
GK LG G FG AT G AV K+ KM+ A D K E+KI+ L H
Sbjct: 36 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAV-KMLKSTAHADEKEALMSELKIMSHLGQH 94
Query: 157 ENVVKFYNAFEDDNYVYIAMELCEGGELLDRI--------------------LAKKDSRY 196
EN+V A V + E C G+LL+ + L K+D R
Sbjct: 95 ENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRP 154
Query: 197 TE-KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 255
E +D Q+ + A +HRD+ N L + K DFGL+ I
Sbjct: 155 LELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGH---VAKIGDFGLARDIMND 211
Query: 256 KKFQDIVGSAY----YVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
+ + G+A ++APE + +SDVWS G++ + I G P+
Sbjct: 212 SNYI-VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPY 261
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 97/208 (46%), Gaps = 24/208 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G FG + A + +G VAVK + + V + REV I++ L H N+V F
Sbjct: 45 IGAGSFGTVHRA--EWHGSDVAVKILMEQDFHAE-RVNEFLREVAIMKRLR-HPNIVLFM 100
Query: 164 NAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HLH 218
A + I E G L R+L K +R + R+ L +A + +LH
Sbjct: 101 GAVTQPPNLSIVTEYLSRGSLY-RLLHKSGAREQLDE-----RRRLSMAYDVAKGMNYLH 154
Query: 219 G----LVHRDMKPENFLFKSAKEDSSLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVL 273
+VHR++K N L + ++K DFGLS + G+ ++APEVL
Sbjct: 155 NRNPPIVHRNLKSPNLL---VDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVL 211
Query: 274 K-RKSGPESDVWSIGVITYILLCGRRPF 300
+ S +SDV+S GVI + L ++P+
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPW 239
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 38/225 (16%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK +++ A +D +RE ++L L H++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQ-HQH 81
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV-----VRQMLRV 211
+V+F+ + + + E G+L +R L D++ V + Q+L V
Sbjct: 82 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 212 AAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGKKF 258
A++ +L GL VHRD+ N L + +K DFG+S D+ + G +
Sbjct: 141 ASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGR- 196
Query: 259 QDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
+ ++ PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 197 --TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 239
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 76
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L + L K R Q+ +
Sbjct: 77 VKYKGVCYSAGRRN--LKLIMEFLPYGSLRE-YLQKHKERIDHIKLLQYTSQICKGMEYL 133
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 134 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 38/225 (16%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK +++ A +D +RE ++L L H++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQ-HQH 75
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV-----VRQMLRV 211
+V+F+ + + + E G+L +R L D++ V + Q+L V
Sbjct: 76 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 212 AAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGKKF 258
A++ +L GL VHRD+ N L + +K DFG+S D+ + G +
Sbjct: 135 ASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGR- 190
Query: 259 QDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
+ ++ PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 191 --TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 233
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 107/225 (47%), Gaps = 38/225 (16%)
Query: 104 LGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHEN 158
LG G FG ++A + + VAVK +++ A +D +RE ++L L H++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS---ESARQDFQREAELLTMLQ-HQH 104
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAK--KDSRYTEKDAAVV-----VRQMLRV 211
+V+F+ + + + E G+L +R L D++ V + Q+L V
Sbjct: 105 IVRFFGVCTEGRPLLMVFEYMRHGDL-NRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 212 AAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGKKF 258
A++ +L GL VHRD+ N L + +K DFG+S D+ + G +
Sbjct: 164 ASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMSRDIYSTDYYRVGGRT 220
Query: 259 QDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 301
+ ++ PE +L RK ESDVWS GV+ + I G++P++
Sbjct: 221 MLPI---RWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWY 262
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 93/204 (45%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYT----YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG Y G+ VAVKK++ + + D +RE++IL++L H+N+
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST---EEHLRDFEREIEILKSLQ-HDNI 76
Query: 160 VKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC 215
VK+ Y+A + + + ME G L D + A + R Q+ +
Sbjct: 77 VKYKGVCYSAGRRN--LKLIMEYLPYGSLRDYLQAHAE-RIDHIKLLQYTSQICKGMEYL 133
Query: 216 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPE 271
+HRD+ N L ++ ++ +K DFGL+ + K+ + ++ APE
Sbjct: 134 GTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPE 190
Query: 272 VL-KRKSGPESDVWSIGVITYILL 294
L + K SDVWS GV+ Y L
Sbjct: 191 SLTESKFSVASDVWSFGVVLYELF 214
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 40/232 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 28 RLNLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD----------- 200
+ H NVV A + + + +E C+ G L + +K++ KD
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHL 146
Query: 201 ---AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------D 250
+ V + M +A+ +HRD+ N L E + +K DFGL+ D
Sbjct: 147 ICYSFQVAKGMEFLASR----KXIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 199
Query: 251 FIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 200 YVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + G++VAVK I+ + + E ++ L H N+V+
Sbjct: 201 IGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLL 252
Query: 164 NAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG-- 219
E+ +YI E G L+D + ++ S +++ L V A +L G
Sbjct: 253 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL---GGDCLLKFSLDVCEAMEYLEGNN 309
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-RKS 277
VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +K
Sbjct: 310 FVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 363
Query: 278 GPESDVWSIGVITY-ILLCGRRPF 300
+SDVWS G++ + I GR P+
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPY 387
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 93 DFDRR-YTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+F R+ +GK LG G+FG AT +A VAVK +++N P + D+ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSE 76
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL---------------------L 185
+L+ + H +V+K Y A D + + +E + G L
Sbjct: 77 FNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 186 DRILAKKDSR-YTEKDA---AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241
L D R T D A + Q ++ AE LVHRD+ N L E +
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNIL---VAEGRKM 189
Query: 242 KATDFGLSDFI----KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITY-ILLCG 296
K +DFGLS + K+ Q + + + +SDVWS GV+ + I+ G
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 297 RRPF 300
P+
Sbjct: 250 GNPY 253
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 104 LGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG + GD VAVK+++ + P D +RE++IL+AL H +
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL--HSDF 72
Query: 160 VKFYNAFE---DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ Y + + ME G L D L + +R + Q+ +
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEV 272
VHRD+ N L +S ++ +K DFGL+ + K + + ++ APE
Sbjct: 132 SRRCVHRDLAARNILVES---EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 188
Query: 273 LKRKS-GPESDVWSIGVITYILL 294
L +SDVWS GV+ Y L
Sbjct: 189 LSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 106/272 (38%), Gaps = 35/272 (12%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR---EVKILQALAGHENVV 160
LG G +G +G AVK+I + ++ KR ++ I V
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRAT-----VNSQEQKRLLXDLDISXRTVDCPFTV 96
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC----- 215
FY A + V+I EL D L K + +K + + ++A
Sbjct: 97 TFYGALFREGDVWICXEL------XDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 150
Query: 216 HLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 272
HLH ++HRD+KP N L + + +K DFG+S ++ G Y APE
Sbjct: 151 HLHSKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPYXAPER 207
Query: 273 L-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWP 325
+ ++ +SD+WS+G+ L R P+ W + + V P P
Sbjct: 208 INPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL---PAD 264
Query: 326 SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 357
S DF + L K+ + R T + HP+
Sbjct: 265 KFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 93 DFDRR-YTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+F R+ +GK LG G+FG AT +A VAVK +++N P + D+ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSE 76
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL---------------------L 185
+L+ + H +V+K Y A D + + +E + G L
Sbjct: 77 FNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 186 DRILAKKDSR-YTEKDA---AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241
L D R T D A + Q ++ AE LVHRD+ N L E +
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNIL---VAEGRKM 189
Query: 242 KATDFGLSDFI----KPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITY-ILLCG 296
K +DFGLS + K+ Q + + + +SDVWS GV+ + I+ G
Sbjct: 190 KISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 297 RRPF 300
P+
Sbjct: 250 GNPY 253
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 104 LGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG + GD VAVK+++ + P D +RE++IL+AL H +
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL--HSDF 73
Query: 160 VKFYNAFE---DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ Y + + ME G L D L + +R + Q+ +
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEV 272
VHRD+ N L +S ++ +K DFGL+ + K + + ++ APE
Sbjct: 133 SRRCVHRDLAARNILVES---EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 189
Query: 273 LKRKS-GPESDVWSIGVITYILL 294
L +SDVWS GV+ Y L
Sbjct: 190 LSDNIFSRQSDVWSFGVVLYELF 212
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + G++VAVK I+ + + E ++ L H N+V+
Sbjct: 29 IGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLL 80
Query: 164 NAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG-- 219
E+ +YI E G L+D + ++ S +++ L V A +L G
Sbjct: 81 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL---GGDCLLKFSLDVCEAMEYLEGNN 137
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-RKS 277
VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +K
Sbjct: 138 FVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 191
Query: 278 GPESDVWSIGVITY-ILLCGRRPF 300
+SDVWS G++ + I GR P+
Sbjct: 192 STKSDVWSFGILLWEIYSFGRVPY 215
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 21/203 (10%)
Query: 104 LGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG + GD VAVK+++ + P D +RE++IL+AL H +
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL--HSDF 85
Query: 160 VKFYNAFE---DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ Y + + ME G L D L + +R + Q+ +
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEV 272
VHRD+ N L +S ++ +K DFGL+ + K + + ++ APE
Sbjct: 145 SRRCVHRDLAARNILVES---EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPES 201
Query: 273 LKRKS-GPESDVWSIGVITYILL 294
L +SDVWS GV+ Y L
Sbjct: 202 LSDNIFSRQSDVWSFGVVLYELF 224
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 103/234 (44%), Gaps = 20/234 (8%)
Query: 100 IGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQAL-AGHEN 158
+GK +G G FG + + + VA+K +E K P + E + + L + E
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPIKSRAP----QLHLEYRFYKQLGSAGEG 58
Query: 159 VVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 218
+ + Y Y + +EL G L+ + D +T K ++ Q+L H
Sbjct: 59 LPQVYYFGPXGKYNAMVLELL--GPSLEDLFDLCDRTFTLKTVLMIAIQLLSRMEYVHSK 116
Query: 219 GLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK-------FQDIVGSAYYV 268
L++RD+KPENFL + K++ + DFGL+ ++I P K + + G+A Y+
Sbjct: 117 NLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYM 176
Query: 269 APEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
+ L ++ D+ ++G + L G P W + KE + D +R
Sbjct: 177 SINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQKIGDTKR 229
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 96/232 (41%), Gaps = 36/232 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 30 RLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------- 203
+ H NVV A + + + +E C+ G L + +K++ K+A
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLT 148
Query: 204 ---VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-------D 250
++ +VA +HRD+ N L E + +K DFGL+ D
Sbjct: 149 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 205
Query: 251 FIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 206 YVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 253
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 94/204 (46%), Gaps = 24/204 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + G++VAVK I+ + + E ++ L H N+V+
Sbjct: 14 IGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLL 65
Query: 164 NAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG-- 219
E+ +YI E G L+D + ++ S +++ L V A +L G
Sbjct: 66 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL---GGDCLLKFSLDVCEAMEYLEGNN 122
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-RKS 277
VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +K
Sbjct: 123 FVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 176
Query: 278 GPESDVWSIGVITY-ILLCGRRPF 300
+SDVWS G++ + I GR P+
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY 200
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 19/235 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +GK +G G FG + + + VA+K +E K P + E + + L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAP----QLHLEYRFYKQLGSGD 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + Y Y + +EL G L+ + D ++ K ++ Q++ H
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 218 HGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK-------FQDIVGSAYY 267
L++RD+KPENFL K + DFGL+ ++I P K + + G+A Y
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARY 183
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
++ L ++ D+ ++G + L G P W + KE + D +R
Sbjct: 184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQKIGDTKR 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 100/244 (40%), Gaps = 45/244 (18%)
Query: 93 DFDRR-YTIGKLLGHGQFGYTYVAT-----DKANGDRVAVKKIEKNKMILPIAVEDVKRE 146
+F R+ +GK LG G+FG AT +A VAVK +++N P + D+ E
Sbjct: 19 EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENAS--PSELRDLLSE 76
Query: 147 VKILQALAGHENVVKFYNAFEDDNYVYIAMELCEGGEL---------------------L 185
+L+ + H +V+K Y A D + + +E + G L
Sbjct: 77 FNVLKQV-NHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRN 135
Query: 186 DRILAKKDSR-YTEKDA---AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 241
L D R T D A + Q ++ AE LVHRD+ N L E +
Sbjct: 136 SSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAARNIL---VAEGRKM 189
Query: 242 KATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITY-ILLCG 296
K +DFGLS + K+ Q + + + +SDVWS GV+ + I+ G
Sbjct: 190 KISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLG 249
Query: 297 RRPF 300
P+
Sbjct: 250 GNPY 253
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 104 LGHGQFGYTYVATDKANGDR----VAVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
LG G FG + GD VAVK+++ + P D +RE++IL+AL H +
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG---PDQQRDFQREIQILKAL--HSDF 69
Query: 160 VKFYNAFE---DDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 216
+ Y + + ME G L D L + +R + Q+ +
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRD-FLQRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV-----GSAYYVAPE 271
VHRD+ N L +S ++ +K DFGL+ + P K +V ++ APE
Sbjct: 129 SRRCVHRDLAARNILVES---EAHVKIADFGLAKLL-PLDKDXXVVREPGQSPIFWYAPE 184
Query: 272 VLKRKS-GPESDVWSIGVITYILL 294
L +SDVWS GV+ Y L
Sbjct: 185 SLSDNIFSRQSDVWSFGVVLYELF 208
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 24/204 (11%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G+FG + + G++VAVK I+ + + E ++ L H N+V+
Sbjct: 20 IGKGEFGDVMLGDYR--GNKVAVKCIKNDA-----TAQAFLAEASVMTQLR-HSNLVQLL 71
Query: 164 NAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG-- 219
E+ +YI E G L+D + ++ S +++ L V A +L G
Sbjct: 72 GVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL---GGDCLLKFSLDVCEAMEYLEGNN 128
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLKRKS- 277
VHRD+ N L ED+ K +DFGL+ K QD + APE L+ +
Sbjct: 129 FVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREAAF 182
Query: 278 GPESDVWSIGVITY-ILLCGRRPF 300
+SDVWS G++ + I GR P+
Sbjct: 183 STKSDVWSFGILLWEIYSFGRVPY 206
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 41/234 (17%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 29 RLNLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 87
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
+ H NVV A + + + +E C+ G L + +K++ K + + L +
Sbjct: 88 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTL 147
Query: 212 AAECHL----------------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------ 249
HL +HRD+ N L E + +K DFGL+
Sbjct: 148 E---HLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKD 201
Query: 250 -DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
D ++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 202 PDXVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--------EKNKMILPIAVEDVKREVKI 149
YT+ + + G +G D + G VA+K++ N + + V RE+++
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 150 LQALAGHENVVKF---YNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
L H N++ + FE+ +Y+ EL L +++ + + +
Sbjct: 83 LNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHIQYF 139
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
+ +L H G+VHRD+ P N L +++ + DF L+ V
Sbjct: 140 MYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTH 196
Query: 265 AYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKT-----------------E 305
+Y APE++ + G D+WS G + + + F T E
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 306 DGIF------KEVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
D + ++ LRN + + W P+ A D + K+L +P+ R++ QAL
Sbjct: 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316
Query: 355 HPWVREGGDASEIPIDIS 372
HP+ D P+D++
Sbjct: 317 HPYFESLFD----PLDLT 330
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 129/320 (40%), Gaps = 77/320 (24%)
Query: 83 GKRTDFGYDKDFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVED 142
G F + R+ T+ + +G G++G + + G+ VAVK +
Sbjct: 24 GSGLPFLVQRTVARQITLLECVGKGRYGEVWRGS--WQGENVAVKIFSSRDE------KS 75
Query: 143 VKREVKILQA-LAGHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYT 197
RE ++ + HEN++ F + +++ E G L D + + T
Sbjct: 76 WFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLT 129
Query: 198 EKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDF 246
D +R +L +A+ HLH + HRD+K +N L K++ D
Sbjct: 130 TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIADL 186
Query: 247 GLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILL 294
GL+ D+ VG+ Y+APEVL S D+W+ G++ + +
Sbjct: 187 GLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV- 245
Query: 295 CGRRPFWDKTEDGI-------FKEVLRNKPDF----------RRKP-----W---PSISN 329
RR +GI F +V+ N P F +++P W P++++
Sbjct: 246 -ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTS 300
Query: 330 SAKDFVKKLLVKDPRARLTA 349
AK +K+ ++P ARLTA
Sbjct: 301 LAK-LMKECWYQNPSARLTA 319
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 9/191 (4%)
Query: 113 YVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYV 172
Y A D VA+K + P+ +RE + L +VV ++ E D +
Sbjct: 51 YEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQ-EPHVVPIHDFGEIDGQL 109
Query: 173 YIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 232
Y+ L G +L + ++ A +VRQ+ H G HRD+KPEN L
Sbjct: 110 YVDXRLINGVDLAAXL--RRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV 167
Query: 233 KSAKEDSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVI 289
+ D DFG++ K Q + VG+ YY APE +D++++ +
Sbjct: 168 SA---DDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCV 224
Query: 290 TYILLCGRRPF 300
Y L G P+
Sbjct: 225 LYECLTGSPPY 235
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 126/318 (39%), Gaps = 54/318 (16%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKI--------EKNKMILPIAVEDVKREVKI 149
YT+ + + G +G D + G VA+K++ N + + V RE+++
Sbjct: 24 YTVQRFISSGSYGAVCAGVD-SEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 150 LQALAGHENVVKF---YNAFEDDNY--VYIAMELCEGGELLDRILAKKDSRYTEKDAAVV 204
L H N++ + FE+ +Y+ EL L +++ + + +
Sbjct: 83 LNHF-HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTD--LAQVIHDQRIVISPQHIQYF 139
Query: 205 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
+ +L H G+VHRD+ P N L +++ + DF L+ V
Sbjct: 140 MYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTH 196
Query: 265 AYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKT-----------------E 305
+Y APE++ + G D+WS G + + + F T E
Sbjct: 197 RWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIE 256
Query: 306 DGIF------KEVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS 354
D + ++ LRN + + W P+ A D + K+L +P+ R++ QAL
Sbjct: 257 DVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316
Query: 355 HPWVREGGDASEIPIDIS 372
HP+ D P+D++
Sbjct: 317 HPYFESLFD----PLDLT 330
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV--- 203
KIL + H NVV A + + + E C+ G L + +K++ K A
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 204 --------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 249
++ +VA +HRD+ N L E + +K DFGL+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDI 189
Query: 250 ----DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
D+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 190 YKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV--- 203
KIL + H NVV A + + + E C+ G L + +K++ K A
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 204 --------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 249
++ +VA +HRD+ N L E + +K DFGL+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDI 189
Query: 250 ----DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
D+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 190 YKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 36/232 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 28 RLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------- 203
+ H NVV A + + + +E C+ G L + +K++ K A
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 204 ---VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-------D 250
++ +VA +HRD+ N L E + +K DFGL+ D
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 203
Query: 251 FIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 204 YVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 98/237 (41%), Gaps = 37/237 (15%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 60 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 118
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV--- 203
KIL + H NVV A + + + +E C+ G L + +K++ K A
Sbjct: 119 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 178
Query: 204 --------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 249
++ +VA +HRD+ N L E + +K DFGL+
Sbjct: 179 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDI 235
Query: 250 ----DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
D+++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 236 YKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 67/141 (47%), Gaps = 22/141 (15%)
Query: 171 YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKP 227
Y+YI M+LC L D + + +++ V + +++A H GL+HRD+KP
Sbjct: 135 YLYIQMQLCRKENLKDWM--NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKP 192
Query: 228 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-------------VGSAYYVAPEVLK 274
N F D +K DFGL + ++ Q + VG+ Y++PE +
Sbjct: 193 SNIFFTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIH 249
Query: 275 RKS-GPESDVWSIGVITYILL 294
+ + D++S+G+I + LL
Sbjct: 250 GNNYSHKVDIFSLGLILFELL 270
Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILP---IAVEDVKREVKILQALAGHEN 158
+ +G G FG + A +K + A+K+I LP +A E V REVK L L H
Sbjct: 12 QCMGRGGFGVVFEAKNKVDDCNYAIKRIR-----LPNRELAREKVMREVKALAKLE-HPG 65
Query: 159 VVKFYNAF 166
+V+++NA+
Sbjct: 66 IVRYFNAW 73
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 34/230 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 30 RLKLGKPLGRGAFGQV-IEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIH 88
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------- 203
+ H NVV A + + + +E C+ G L + +K++ K +
Sbjct: 89 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLE 148
Query: 204 -VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFI 252
++ +VA +HRD+ N L E + +K DFGL+ D +
Sbjct: 149 HLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPDXV 205
Query: 253 KPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
+ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 206 RKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +GK +G G FG + + + VA+K +E K P + E + + L +
Sbjct: 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAP----QLHLEYRFYKQLGSGD 65
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + Y Y + +EL G L+ + D ++ K ++ Q++ H
Sbjct: 66 GIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 123
Query: 218 HGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK-------FQDIVGSAYY 267
L++RD+KPENFL K + DF L+ ++I P K + + G+A Y
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARY 183
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
++ L ++ D+ ++G + L G P W + KE + D +R
Sbjct: 184 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQKIGDTKR 237
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 43/248 (17%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y +G+ V A+K + +N P A +++ E ++ + G
Sbjct: 23 KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS--PKANKEILDEAYVMAGV-GSP 79
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
V + V + +L G LLD + + R +D Q+ + +
Sbjct: 80 YVSRLLGICLTST-VQLVTQLMPYGCLLDHVRENR-GRLGSQDLLNWCMQIAKGMSYLED 137
Query: 218 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY----------Y 267
LVHRD+ N L KS +K TDFGL+ + DI + Y +
Sbjct: 138 VRLVHRDLAARNVLVKSPNH---VKITDFGLA-------RLLDIDETEYHADGGKVPIKW 187
Query: 268 VAPE-VLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF----RR 321
+A E +L+R+ +SDVWS GV + L+ G +P+ DGI R PD R
Sbjct: 188 MALESILRRRFTHQSDVWSYGVTVWELMTFGAKPY-----DGIPA---REIPDLLEKGER 239
Query: 322 KPWPSISN 329
P P I
Sbjct: 240 LPQPPICT 247
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 99/235 (42%), Gaps = 19/235 (8%)
Query: 98 YTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
+ +GK +G G FG + + + VA+K +E K P + E + + L +
Sbjct: 32 FRVGKKIGCGNFGELRLGKNLYTNEYVAIK-LEPMKSRAP----QLHLEYRFYKQLGSGD 86
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL 217
+ + Y Y + +EL G L+ + D ++ K ++ Q++ H
Sbjct: 87 GIPQVYYFGPCGKYNAMVLELL--GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHS 144
Query: 218 HGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKK-------FQDIVGSAYY 267
L++RD+KPENFL K + DF L+ ++I P K + + G+A Y
Sbjct: 145 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARY 204
Query: 268 VAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 321
++ L ++ D+ ++G + L G P W + KE + D +R
Sbjct: 205 MSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-WQGLKADTLKERYQKIGDTKR 258
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G+ V + K N+ P A + E I+ ++ H ++
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 102
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V+ + + +L G LL+ + KD+ ++ V Q+ +
Sbjct: 103 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QIAKGMMYLEERR 160
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 275
LVHRD+ N L KS + +K TDFGL+ ++ +K + G ++A E + R
Sbjct: 161 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 276 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 329
K +SDVWS GV + L+ G +P+ DGI R PD R P P I
Sbjct: 218 KFTHQSDVWSYGVTIWELMTFGGKPY-----DGIPT---REIPDLLEKGERLPQPPICT 268
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 103/239 (43%), Gaps = 25/239 (10%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEK--NKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G+ V + K N+ P A + E I+ ++ H ++
Sbjct: 21 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM-DHPHL 79
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
V+ + + +L G LL+ + KD+ ++ V Q+ +
Sbjct: 80 VRLLGVCLSPT-IQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV-QIAKGMMYLEERR 137
Query: 220 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 275
LVHRD+ N L KS + +K TDFGL+ ++ +K + G ++A E + R
Sbjct: 138 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 276 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 329
K +SDVWS GV + L+ G +P+ DGI R PD R P P I
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFGGKPY-----DGIPT---REIPDLLEKGERLPQPPICT 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 97/237 (40%), Gaps = 37/237 (15%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV--- 203
KIL + H NVV A + + + +E C+ G L + +K++ K A
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 204 --------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 249
++ +VA +HRD+ N L E + +K DFGL+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDI 189
Query: 250 ----DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
D ++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 190 XKDPDXVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 77/307 (25%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R T+ + +G G++G + + G+ VAVK + RE ++ +
Sbjct: 8 RDITLLECVGKGRYGEVWRGS--WQGENVAVKIFSSRDE------KSWFRETELYNTVML 59
Query: 155 GHENVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F + +++ E G L D + + T D +R +L
Sbjct: 60 RHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLS 113
Query: 211 VAAE-CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 259
+A+ HLH + HRD+K +N L K++ D GL+
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIADLGLAVMHSQSTNQL 170
Query: 260 DI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDG 307
D+ VG+ Y+APEVL S D+W+ G++ + + RR +G
Sbjct: 171 DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARR----MVSNG 224
Query: 308 I-------FKEVLRNKPDF----------RRKP-----W---PSISNSAKDFVKKLLVKD 342
I F +V+ N P F +++P W P++++ AK +K+ ++
Sbjct: 225 IVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAK-LMKECWYQN 283
Query: 343 PRARLTA 349
P ARLTA
Sbjct: 284 PSARLTA 290
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R + + +G G+FG + K G+ VAVK + RE +I Q +
Sbjct: 3 RTIVLQESIGKGRFGEVW--RGKWRGEEVAVKIFSSREE------RSWFREAEIYQTVML 54
Query: 155 GHENVVKFYNAFEDDNYVYIAMELC----EGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN + + L E G L D + +RYT ++ +
Sbjct: 55 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALST 109
Query: 211 VAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+ HLH + HRD+K +N L K++ + D GL+ D
Sbjct: 110 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVRHDSATDTID 166
Query: 261 I-----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
I VG+ Y+APEVL +S +D++++G++ +
Sbjct: 167 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R + + +G G+FG + K G+ VAVK + RE +I Q +
Sbjct: 4 RTIVLQESIGKGRFGEVW--RGKWRGEEVAVKIFSSREE------RSWFREAEIYQTVML 55
Query: 155 GHENVVKFYNAFEDDNYVYIAMELC----EGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN + + L E G L D + +RYT ++ +
Sbjct: 56 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALST 110
Query: 211 VAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+ HLH + HRD+K +N L K++ + D GL+ D
Sbjct: 111 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVRHDSATDTID 167
Query: 261 I-----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
I VG+ Y+APEVL +S +D++++G++ +
Sbjct: 168 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 210
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 36/232 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 28 RLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------- 203
+ H NVV A + + + +E C+ G L + +K++ K A
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 204 ---VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-------D 250
++ +VA +HRD+ N L E + +K DFGL+ D
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPD 203
Query: 251 FIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 204 XVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 94/232 (40%), Gaps = 36/232 (15%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EVKILQA 152
R +GK LG G FG + D D+ A + KM+ A R E+KIL
Sbjct: 28 RLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH 86
Query: 153 LAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV-------- 203
+ H NVV A + + + +E C+ G L + +K++ K A
Sbjct: 87 IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 146
Query: 204 ---VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS-------D 250
++ +VA +HRD+ N L E + +K DFGL+ D
Sbjct: 147 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIXKDPD 203
Query: 251 FIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 204 XVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 251
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 37/237 (15%)
Query: 93 DFDR-RYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKR----EV 147
+F R R +GK LG G FG + D D+ A + KM+ A R E+
Sbjct: 14 EFPRDRLKLGKPLGRGAFGQV-IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSEL 72
Query: 148 KILQALAGHENVVKFYNAF-EDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAV--- 203
KIL + H NVV A + + + E C+ G L + +K++ K A
Sbjct: 73 KILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLY 132
Query: 204 --------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 249
++ +VA +HRD+ N L E + +K DFGL+
Sbjct: 133 KDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDI 189
Query: 250 ----DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPF 300
D ++ G D ++APE + R +SDVWS GV+ + I G P+
Sbjct: 190 XKDPDXVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 242
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R + + +G G+FG + K G+ VAVK + RE +I Q +
Sbjct: 6 RTIVLQESIGKGRFGEVW--RGKWRGEEVAVKIFSSREE------RSWFREAEIYQTVML 57
Query: 155 GHENVVKFYNAFEDDNYVYIAMELC----EGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN + + L E G L D + +RYT ++ +
Sbjct: 58 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALST 112
Query: 211 VAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+ HLH + HRD+K +N L K++ + D GL+ D
Sbjct: 113 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVRHDSATDTID 169
Query: 261 I-----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
I VG+ Y+APEVL +S +D++++G++ +
Sbjct: 170 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 212
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R + + +G G+FG + K G+ VAVK + RE +I Q +
Sbjct: 29 RTIVLQESIGKGRFGEVW--RGKWRGEEVAVKIFSSREE------RSWFREAEIYQTVML 80
Query: 155 GHENVVKFYNAFEDDNYVYIAMELC----EGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN + + L E G L D + +RYT ++ +
Sbjct: 81 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALST 135
Query: 211 VAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+ HLH + HRD+K +N L K++ + D GL+ D
Sbjct: 136 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVRHDSATDTID 192
Query: 261 I-----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
I VG+ Y+APEVL +S +D++++G++ +
Sbjct: 193 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R + + +G G+FG + K G+ VAVK + RE +I Q +
Sbjct: 42 RTIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREE------RSWFREAEIYQTVML 93
Query: 155 GHENVVKFYNAFEDDNYVYIAMELC----EGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN + + L E G L D + +RYT ++ +
Sbjct: 94 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALST 148
Query: 211 VAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+ HLH + HRD+K +N L K++ + D GL+ D
Sbjct: 149 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVRHDSATDTID 205
Query: 261 I-----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
I VG+ Y+APEVL +S +D++++G++ +
Sbjct: 206 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 93/223 (41%), Gaps = 43/223 (19%)
Query: 96 RRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LA 154
R + + +G G+FG + K G+ VAVK + RE +I Q +
Sbjct: 9 RTIVLQESIGKGRFGEVW--RGKWRGEEVAVKIFSSREE------RSWFREAEIYQTVML 60
Query: 155 GHENVVKFYNAFEDDNYVYIAMELC----EGGELLDRILAKKDSRYTEKDAAVVVRQMLR 210
HEN++ F A DN + + L E G L D + +RYT ++ +
Sbjct: 61 RHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYL-----NRYTVTVEGMIKLALST 115
Query: 211 VAAECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 260
+ HLH + HRD+K +N L K++ + D GL+ D
Sbjct: 116 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVRHDSATDTID 172
Query: 261 I-----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
I VG+ Y+APEVL +S +D++++G++ +
Sbjct: 173 IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 215
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 77/304 (25%)
Query: 99 TIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA-LAGHE 157
T+ + +G G++G + + G+ VAVK + RE ++ + HE
Sbjct: 11 TLLECVGKGRYGEVWRGS--WQGENVAVKIFSSRDE------KSWFRETELYNTVMLRHE 62
Query: 158 NVVKF----YNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA 213
N++ F + +++ E G L D + + T D +R +L +A+
Sbjct: 63 NILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL------QLTTLDTVSCLRIVLSIAS 116
Query: 214 E-CHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI- 261
HLH + HRD+K +N L K++ D GL+ D+
Sbjct: 117 GLAHLHIEIFGTQGKPAIAHRDLKSKNIL---VKKNGQCCIADLGLAVMHSQSTNQLDVG 173
Query: 262 ----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-- 308
VG+ Y+APEVL S D+W+ G++ + + RR +GI
Sbjct: 174 NNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV--ARR----MVSNGIVE 227
Query: 309 -----FKEVLRNKPDF----------RRKP-----W---PSISNSAKDFVKKLLVKDPRA 345
F +V+ N P F +++P W P++++ AK +K+ ++P A
Sbjct: 228 DYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSA 286
Query: 346 RLTA 349
RLTA
Sbjct: 287 RLTA 290
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/291 (21%), Positives = 116/291 (39%), Gaps = 40/291 (13%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA 154
++ Y + LG G F Y + +G A+K+I ++ E+ +RE + L
Sbjct: 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQ---DREEAQREAD-MHRLF 83
Query: 155 GHENVVKF--YNAFEDD--NYVYIAMELCEGGELLDRI--LAKKDSRYTEKDAAVVVRQM 208
H N+++ Y E + ++ + + G L + I L K + TE ++ +
Sbjct: 84 NHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGI 143
Query: 209 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVG- 263
R H G HRD+KP N L + + + G + QD
Sbjct: 144 CRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQ 203
Query: 264 --SAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE------ 311
+ Y APE+ +S +DVWS+G + Y ++ G P+ D +F++
Sbjct: 204 RCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY-----DMVFQKGDSVAL 258
Query: 312 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR------LTAAQALSHP 356
++N+ + P S++ + ++ DP R L+ +AL P
Sbjct: 259 AVQNQLSIPQS--PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 78
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 79 HVCRLLGICLTST-VQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 136
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 137 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 79
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 80 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 137
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 138 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 80
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 81 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 138
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 139 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 78
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 79 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 136
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 137 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 190
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 191 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 81
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 82 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 139
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 140 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 95/219 (43%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 77
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 78 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 135
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 136 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 92/217 (42%), Gaps = 24/217 (11%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV--AVKKIEKNKMILPIAVEDVKREVKILQALAGHENV 159
K+LG G FG Y G++V V +E + P A +++ E ++ A + +V
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM-ASVDNPHV 113
Query: 160 VKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAECH 216
+ V + +L G LLD + KD S+Y + + M +
Sbjct: 114 CRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED--- 169
Query: 217 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEV 272
LVHRD+ N L K+ + +K TDFGL+ + +K G + +
Sbjct: 170 -RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 273 LKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 257
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 113/273 (41%), Gaps = 32/273 (11%)
Query: 95 DRRYTIGKLLGHGQFGYTYVATDKANGD---RVAVKKIEKNKMILPIAVEDVKREVKILQ 151
++++T+G++LG G+FG A K +VAVK + K +I +E+ RE ++
Sbjct: 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKML-KADIIASSDIEEFLREAACMK 80
Query: 152 ALAGHENVVKFYNAFEDDN------YVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVV 205
H +V K + + + G+L +LA SR E + +
Sbjct: 81 EF-DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA---SRIGENPFNLPL 136
Query: 206 RQMLR--VAAECHLHGL-----VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 258
+ ++R V C + L +HRD+ N + ED ++ DFGLS I G +
Sbjct: 137 QTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML---AEDMTVCVADFGLSRKIYSGDYY 193
Query: 259 QDIVGSAY---YVAPEVLKRK-SGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVL 313
+ S ++A E L SDVW+ GV + I+ G+ P+ I+ ++
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI 253
Query: 314 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 346
R K P D + + DP+ R
Sbjct: 254 GGN---RLKQPPECMEEVYDLMYQCWSADPKQR 283
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 51/221 (23%)
Query: 102 KLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVK--REVKILQA-LAGHEN 158
K +G G++G ++ K G++VAVK E+ RE +I Q L HEN
Sbjct: 43 KQIGKGRYGEVWMG--KWRGEKVAVKVF--------FTTEEASWFRETEIYQTVLMRHEN 92
Query: 159 VVKFYNA----FEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR-VAA 213
++ F A +Y+ + E G L D + + T DA +++ V+
Sbjct: 93 ILGFIAADIKGTGSWTQLYLITDYHENGSLYDYL------KSTTLDAKSMLKLAYSSVSG 146
Query: 214 ECHLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI- 261
CHLH + HRD+K +N L K++ + D GL+ FI + DI
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNIL---VKKNGTCCIADLGLAVKFISDTNEV-DIP 202
Query: 262 ----VGSAYYVAPEVLKR-------KSGPESDVWSIGVITY 291
VG+ Y+ PEVL +S +D++S G+I +
Sbjct: 203 PNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 110/266 (41%), Gaps = 20/266 (7%)
Query: 104 LGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVVKFY 163
+G G F Y D VA +++ K+ + K E + L+ L H N+V+FY
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS-ERQRFKEEAEXLKGLQ-HPNIVRFY 91
Query: 164 NAFEDD----NYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG 219
+++E + + EL G L + K+ K RQ+L+ H
Sbjct: 92 DSWESTVKGKKCIVLVTELXTSGTL--KTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRT 149
Query: 220 --LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS 277
++HRD+K +N S+K D GL+ +K + ++G+ + APE + K
Sbjct: 150 PPIIHRDLKCDNIFITGPT--GSVKIGDLGLAT-LKRASFAKAVIGTPEFXAPEXYEEKY 206
Query: 278 GPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN-KP-DFRRKPWPSISNSAKDF 334
DV++ G P+ + + I++ V KP F + P + K+
Sbjct: 207 DESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEV----KEI 262
Query: 335 VKKLLVKDPRARLTAAQALSHPWVRE 360
++ + ++ R + L+H + +E
Sbjct: 263 IEGCIRQNKDERYSIKDLLNHAFFQE 288
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 77
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 78 HVCRLLGICLTST-VQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 135
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 136 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 122/302 (40%), Gaps = 56/302 (18%)
Query: 49 HQHQHQERAKNYQQLKTKQHQKTNSRRQTGVIP-------CGKRTDFGYDKDFDRR-YTI 100
++ +HQE +L++ +++ + R T + GK + K+ R+ T+
Sbjct: 2 YRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNITL 61
Query: 101 GKLLGHGQFGYTYVA-----TDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALA- 154
+ LGHG FG Y + + +VAVK LP + +++AL
Sbjct: 62 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT-------LPEVCSEQDELDFLMEALII 114
Query: 155 ---GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRV 211
H+N+V+ +I +EL GG+L + ++ + +++ + +L V
Sbjct: 115 SKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL--KSFLRETRPRPSQPSSLAMLDLLHV 172
Query: 212 AAE--CHLHGL-----VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 264
A + C L +HRD+ N L K DFG++ +DI +
Sbjct: 173 ARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---------RDIYRA 223
Query: 265 AYY------------VAPEV-LKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFK 310
+YY + PE ++ ++D WS GV+ + I G P+ K+ + +
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 283
Query: 311 EV 312
V
Sbjct: 284 FV 285
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+FD ++ L+GHG FG Y + +G +VA+K+ P + + ++ ++
Sbjct: 40 NFDHKF----LIGHGVFGKVYKGVLR-DGAKVALKRRT------PESSQGIEEFETEIET 88
Query: 153 LA--GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD----SRYTEKDAAVVVR 206
L+ H ++V ++ N + + + E G L R L D S E+ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL-KRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------ 260
R H ++HRD+K N L E+ K TDFG+S K G +
Sbjct: 148 AA-RGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGIS---KKGTELDQTHLXXV 200
Query: 261 IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGR 297
+ G+ Y+ PE +K + +SDV+S GV+ + +LC R
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 116/285 (40%), Gaps = 45/285 (15%)
Query: 69 QKTNSRRQTGVIPCGKRTDFGYDKDF---------DRRYTIGKLLGHGQFGYTYVATDKA 119
++ NSR GV+ ++ D + T+ + LG G FG Y K
Sbjct: 11 KRNNSRLGNGVLYASVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKG 70
Query: 120 -----NGDRVAVKKI-EKNKMILPIAVEDVKREVKILQALAGHENVVKFYNAFEDDNYVY 173
RVA+K + E M I + E +++ H +VV+
Sbjct: 71 VVKDEPETRVAIKTVNEAASMRERI---EFLNEASVMKEFNCH-HVVRLLGVVSQGQPTL 126
Query: 174 IAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDM 225
+ MEL G+L + + + + A + +M+++A E + + VHRD+
Sbjct: 127 VIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDL 186
Query: 226 KPENFLFKSAKEDSSLKATDFGLS------DFIKPGKKFQDIVGSAYYVAPEVLKRKS-G 278
N + ED ++K DFG++ D+ + G K + +++PE LK
Sbjct: 187 AARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGGKG---LLPVRWMSPESLKDGVFT 240
Query: 279 PESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV----LRNKPD 318
SDVWS GV+ + I +P+ + + + + V L +KPD
Sbjct: 241 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPD 285
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 16 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 72
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD-AAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 73 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 131
Query: 210 RVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 132 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 188
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 189 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 245
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 246 GGLLDKPD 253
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 87
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 88 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 145
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 146 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 199
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 200 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 233
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 20 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 76
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 77 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 135
Query: 210 RVAAE-------CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 192
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 193 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 250 GGLLDKPD 257
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 85/206 (41%), Gaps = 15/206 (7%)
Query: 104 LGHGQFGYTYVAT-DKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG D +G VAVK ++ + + P A++D REV + +L H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLI 78
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ Y + + EL G LLDR L K + + Q+
Sbjct: 79 RLYGVVLTPP-MKMVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY-YVAPEVLKRK 276
+HRD+ N L + +K DFGL + Q+ + + APE LK +
Sbjct: 137 IHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 277 S-GPESDVWSIGVITYILLC-GRRPF 300
+ SD W GV + + G+ P+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 17/207 (8%)
Query: 104 LGHGQFGYTYVAT-DKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG D +G VAVK ++ + + P A++D REV + +L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLI 74
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ Y + + EL G LLDR L K + + Q+
Sbjct: 75 RLYGVVLTPP-MKMVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA-----YYVAPEVLK- 274
+HRD+ N L + +K DFGL + P ++ + APE LK
Sbjct: 133 IHRDLAARNLLLATR---DLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKT 188
Query: 275 RKSGPESDVWSIGVITYILLC-GRRPF 300
R SD W GV + + G+ P+
Sbjct: 189 RTFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 80
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 81 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 138
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 139 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 84/207 (40%), Gaps = 17/207 (8%)
Query: 104 LGHGQFGYTYVAT-DKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG D +G VAVK ++ + + P A++D REV + +L H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLI 84
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ Y + + EL G LLDR L K + + Q+
Sbjct: 85 RLYGVVLTPP-MKMVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA-----YYVAPEVLK- 274
+HRD+ N L + +K DFGL + P ++ + APE LK
Sbjct: 143 IHRDLAARNLLLATR---DLVKIGDFGLMRAL-PQNDDHXVMQEHRKVPFAWCAPESLKT 198
Query: 275 RKSGPESDVWSIGVITYILLC-GRRPF 300
R SD W GV + + G+ P+
Sbjct: 199 RTFSHASDTWMFGVTLWEMFTYGQEPW 225
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 79
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 80 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 137
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 138 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 75
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 76 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 210 RVAAE-------CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 192 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 249 GGLLDKPD 256
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 46 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 102
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 103 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 160
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 161 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 214
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 215 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 248
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 19 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 75
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 76 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 134
Query: 210 RVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 191
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 192 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 249 GGLLDKPD 256
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 13 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 69
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 70 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 128
Query: 210 RVAAE-------CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 185
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 186 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 243 GGLLDKPD 250
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 83
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 84 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 141
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 142 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 195
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 196 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 229
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 80
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 81 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 138
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 139 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 192
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 193 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 32/218 (14%)
Query: 93 DFDRRYTIGKLLGHGQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQA 152
+FD ++ L+GHG FG Y + +G +VA+K+ P + + ++ ++
Sbjct: 40 NFDHKF----LIGHGVFGKVYKGVLR-DGAKVALKRRT------PESSQGIEEFETEIET 88
Query: 153 LA--GHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD----SRYTEKDAAVVVR 206
L+ H ++V ++ N + + + E G L R L D S E+ + +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL-KRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 207 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------ 260
R H ++HRD+K N L E+ K TDFG+S K G +
Sbjct: 148 AA-RGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGIS---KKGTELGQTHLXXV 200
Query: 261 IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGR 297
+ G+ Y+ PE +K + +SDV+S GV+ + +LC R
Sbjct: 201 VKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+L G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 84
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 85 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 142
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 143 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 17 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 73
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILA-KKDSRYTEKDAAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 74 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMI 132
Query: 210 RVAAEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 189
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 190 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 247 GGLLDKPD 254
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 77
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 78 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 135
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 136 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 189
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 190 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 15/206 (7%)
Query: 104 LGHGQFGYTYVAT-DKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG D +G VAVK ++ + + P A++D REV + +L H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLI 74
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ Y + + EL G LLDR L K + + Q+
Sbjct: 75 RLYGVVLTPP-MKMVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY-YVAPEVLK-R 275
+HRD+ N L + +K DFGL + Q+ + + APE LK R
Sbjct: 133 IHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 189
Query: 276 KSGPESDVWSIGVITYILLC-GRRPF 300
SD W GV + + G+ P+
Sbjct: 190 TFSHASDTWMFGVTLWEMFTYGQEPW 215
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 36/248 (14%)
Query: 97 RYTIGKLLGHGQFGYTYVATDKA-----NGDRVAVKKI-EKNKMILPIAVEDVKREVKIL 150
+ T+ + LG G FG Y K RVA+K + E M I + E ++
Sbjct: 26 KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI---EFLNEASVM 82
Query: 151 QALAGHENVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKD-AAVVVRQML 209
+ H +VV+ + MEL G+L + + + + A + +M+
Sbjct: 83 KEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 210 RVAAE-------CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS------DFIKPGK 256
++A E + + VHRD+ N + ED ++K DFG++ D+ + G
Sbjct: 142 QMAGEIADGMAYLNANKFVHRDLAARNCM---VAEDFTVKIGDFGMTRDIYETDYYRKGG 198
Query: 257 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV-- 312
K + +++PE LK SDVWS GV+ + I +P+ + + + + V
Sbjct: 199 KG---LLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 255
Query: 313 --LRNKPD 318
L +KPD
Sbjct: 256 GGLLDKPD 263
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 15/206 (7%)
Query: 104 LGHGQFGYTYVAT-DKANGD--RVAVKKIEKNKMILPIAVEDVKREVKILQALAGHENVV 160
LG G FG D +G VAVK ++ + + P A++D REV + +L H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-DHRNLI 78
Query: 161 KFYNAFEDDNYVYIAMELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 220
+ Y + + EL G LLDR L K + + Q+
Sbjct: 79 RLYGVVLTPP-MKMVTELAPLGSLLDR-LRKHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 221 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAY-YVAPEVLK-R 275
+HRD+ N L + +K DFGL + Q+ + + APE LK R
Sbjct: 137 IHRDLAARNLLLATR---DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR 193
Query: 276 KSGPESDVWSIGVITYILLC-GRRPF 300
SD W GV + + G+ P+
Sbjct: 194 TFSHASDTWMFGVTLWEMFTYGQEPW 219
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 41/214 (19%)
Query: 107 GQFGYTYVATDKANGDRVAVKKIEKNKMILPIAVEDVKREVKILQALAG--HENVVKFYN 164
G+FG + A + D VAVK I P+ + + + + + G HEN+++F
Sbjct: 26 GRFGCVWKA--QLMNDFVAVK-------IFPLQDKQSWQSEREIFSTPGMKHENLLQFIA 76
Query: 165 AFEDDNYVYIAMELCEG----GELLDRILAKKDSRYTEKDAAVVVRQMLR---------- 210
A + + + + + L G L D + K + T + V M R
Sbjct: 77 AEKRGSNLEVELWLITAFHDKGSLTDYL---KGNIITWNELCHVAETMSRGLSYLHEDVP 133
Query: 211 -VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAY 266
E H + HRD K +N L KS D + DFGL+ +PGK D VG+
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKS---DLTAVLADFGLAVRFEPGKPPGDTHGQVGTRR 190
Query: 267 YVAPEVL------KRKSGPESDVWSIGVITYILL 294
Y+APEVL +R + D++++G++ + L+
Sbjct: 191 YMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 81
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 82 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 139
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFG + + +K G +
Sbjct: 140 ---RRLVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 193
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 194 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 227
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 84
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + +L G LLD + KD S+Y + + M +
Sbjct: 85 HVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 142
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFGL+ + +K G +
Sbjct: 143 ---RRLVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALE 196
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 197 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 94/219 (42%), Gaps = 28/219 (12%)
Query: 102 KLLGHGQFGYTYVATDKANGDRV----AVKKIEKNKMILPIAVEDVKREVKILQALAGHE 157
K+LG G FG Y G++V A+K++ + P A +++ E ++ A +
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATS--PKANKEILDEAYVM-ASVDNP 79
Query: 158 NVVKFYNAFEDDNYVYIAMELCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAE 214
+V + V + M+L G LLD + KD S+Y + + M +
Sbjct: 80 HVCRLLGICLTST-VQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 137
Query: 215 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAP 270
LVHRD+ N L K+ + +K TDFG + + +K G +
Sbjct: 138 ---RRLVHRDLAARNVLVKTPQH---VKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALE 191
Query: 271 EVLKRKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 308
+L R +SDVWS GV + L+ G +P+ DGI
Sbjct: 192 SILHRIYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,872,340
Number of Sequences: 62578
Number of extensions: 489029
Number of successful extensions: 5012
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 714
Number of HSP's successfully gapped in prelim test: 390
Number of HSP's that attempted gapping in prelim test: 1645
Number of HSP's gapped (non-prelim): 1280
length of query: 414
length of database: 14,973,337
effective HSP length: 101
effective length of query: 313
effective length of database: 8,652,959
effective search space: 2708376167
effective search space used: 2708376167
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)