Query 015028
Match_columns 414
No_of_seqs 139 out of 978
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 05:23:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/015028.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/015028hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bvx_A Alpha-mannosidase 2; fa 100.0 3.2E-79 1.1E-83 685.9 35.3 362 22-396 65-461 (1045)
2 1o7d_A Lysosomal alpha-mannosi 100.0 3.4E-76 1.2E-80 577.2 33.2 293 26-319 2-297 (298)
3 2wyh_A Alpha-mannosidase; hydr 100.0 1.9E-72 6.6E-77 626.0 34.2 327 27-396 15-363 (923)
4 3lvt_A Glycosyl hydrolase, fam 100.0 3.1E-69 1.1E-73 597.7 32.3 320 37-396 6-343 (899)
5 1k1x_A 4-alpha-glucanotransfer 99.9 6.7E-21 2.3E-25 204.1 24.8 145 37-196 3-148 (659)
6 1o7d_B Lysosomal alpha-mannosi 99.8 2.8E-20 9.7E-25 147.3 7.3 68 317-384 2-69 (84)
7 3n98_A Alpha-amylase, GH57 fam 98.9 1.5E-08 5.2E-13 105.6 14.8 90 104-195 117-222 (562)
8 3p0b_A TT1467 protein; glycosi 98.9 1.8E-08 6.3E-13 104.5 14.0 90 104-195 138-245 (540)
9 2b5d_X Alpha-amylase; (beta/al 98.8 2.6E-08 8.9E-13 104.2 14.7 152 38-194 3-208 (528)
10 3rxz_A Polysaccharide deacetyl 96.2 0.35 1.2E-05 46.1 18.9 112 73-196 61-173 (300)
11 3s6o_A Polysaccharide deacetyl 95.7 1.7 5.8E-05 42.0 25.1 221 74-335 86-308 (321)
12 3cl6_A PUUE allantoinase; URIC 94.4 0.33 1.1E-05 46.6 11.8 108 74-195 81-190 (308)
13 2cc0_A Acetyl-xylan esterase; 93.3 0.5 1.7E-05 42.0 10.2 102 76-190 19-122 (195)
14 3qbu_A Putative uncharacterize 93.2 0.73 2.5E-05 44.6 11.9 109 74-194 74-183 (326)
15 2y8u_A Chitin deacetylase; hyd 93.1 0.47 1.6E-05 43.7 10.0 102 76-190 47-150 (230)
16 2j13_A Polysaccharide deacetyl 91.2 0.72 2.5E-05 42.9 8.8 102 77-190 71-174 (247)
17 3vus_A Poly-beta-1,6-N-acetyl- 90.7 1.2 4.2E-05 41.8 10.0 114 74-196 78-236 (268)
18 1ny1_A Probable polysaccharide 89.2 1.4 4.9E-05 40.5 8.9 100 78-190 60-162 (240)
19 2c71_A Glycoside hydrolase, fa 85.7 1.5 5E-05 39.8 6.7 88 77-175 21-109 (216)
20 2vyo_A ECU11_0510, chitooligos 84.2 2.8 9.5E-05 38.9 8.0 101 77-189 42-149 (254)
21 2iw0_A Chitin deacetylase; hyd 84.2 1.6 5.6E-05 40.5 6.4 107 76-190 56-164 (254)
22 4f9d_A Poly-beta-1,6-N-acetyl- 83.4 1.8 6.3E-05 45.7 7.0 115 74-197 82-241 (618)
23 2og0_A Excisionase; protein-DN 78.8 2.2 7.6E-05 30.0 3.9 36 99-135 5-47 (52)
24 2w3z_A Putative deacetylase; P 74.9 10 0.00034 36.4 8.7 105 76-190 122-237 (311)
25 2c1i_A Peptidoglycan glcnac de 74.4 14 0.00047 37.2 9.9 97 77-188 252-349 (431)
26 1pm6_A Excisionase; antiparall 64.6 4.4 0.00015 30.4 2.8 39 99-138 5-50 (72)
27 1u69_A Hypothetical protein; s 57.8 3.5 0.00012 35.9 1.4 14 163-176 106-119 (163)
28 1ldd_A APC2WHB, anaphase promo 51.0 10 0.00034 28.6 2.8 23 108-130 48-71 (74)
29 4hd5_A Polysaccharide deacetyl 47.8 62 0.0021 31.7 8.6 80 111-196 247-327 (360)
30 4esj_A Type-2 restriction enzy 46.0 21 0.00071 32.9 4.6 98 25-129 142-252 (257)
31 1qbj_A Protein (double-strande 40.4 43 0.0015 25.3 5.0 53 75-130 11-67 (81)
32 1qgp_A Protein (double strande 37.1 39 0.0013 25.1 4.2 51 77-130 17-71 (77)
33 1mwq_A Hypothetical protein HI 32.9 42 0.0014 26.0 4.0 34 99-134 17-50 (101)
34 1tsj_A Conserved hypothetical 31.4 11 0.00039 31.2 0.3 15 163-177 111-125 (139)
35 3oms_A PHNB protein; structura 28.5 14 0.00047 30.8 0.3 15 163-177 120-134 (138)
36 1ucr_A Protein DSVD; dissimila 27.6 33 0.0011 25.9 2.3 49 77-128 6-57 (78)
37 4h08_A Putative hydrolase; GDS 20.4 2E+02 0.0067 24.1 6.4 45 280-324 73-118 (200)
No 1
>3bvx_A Alpha-mannosidase 2; family 38 glycoysl hydrolase, glycosidase, golgi apparatus, membrane, signal-anchor, transmembrane; HET: WZ5; 1.10A {Drosophila melanogaster} SCOP: a.8.3.1 b.30.5.6 c.6.2.1 PDB: 3bud_A 3buq_A* 3bvt_A* 3bui_A* 3bvv_A* 3bvw_A* 3bvu_A* 3cv5_A* 3czn_A* 3czs_A* 2ow6_A* 1r33_A* 1r34_A* 1tqs_A* 1tqt_A* 1tqu_A* 1tqv_A* 1tqw_A* 2alw_A* 2f18_A* ...
Probab=100.00 E-value=3.2e-79 Score=685.92 Aligned_cols=362 Identities=31% Similarity=0.601 Sum_probs=318.5
Q ss_pred ceeeeecCCCCCCCCceEEEEeecccCCccccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCcEEeechHHHHH
Q 015028 22 SEYIAYNTTAGIVPDKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRKFIYVEMAFFQR 101 (414)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~ihvV~HSH~D~~Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~kF~~~e~~~l~~ 101 (414)
+-.|.|+.+.-....+++||+|||||||+||+||+++|+. ..+.+++++||++|++||+++|+|+|+++|++
T Consensus 65 ~~~~~~~~~~~~~~~~~~V~lV~HsH~D~gWl~t~~e~~~--------~~~~~~~~~vl~~L~~~p~~~F~~~e~~~l~~ 136 (1045)
T 3bvx_A 65 GWNIKYDPLKYNAHHKLKVFVVPHSHNDPGWIQTFEEYYQ--------HDTKHILSNALRHLHDNPEMKFIWAEISYFAR 136 (1045)
T ss_dssp SCCCCCCGGGSBTTBCEEEEEEEEEECCSSSSSCHHHHHH--------HTHHHHHHHHHHHHHHCTTCCEEECCHHHHHH
T ss_pred cchhhhhccccCCCCceEEEEEecCCCCccccchHHHhhh--------HHHHHHHHHHHHHHHHCCCcEEEEecHHHHHH
Confidence 4455565433333448999999999999999999999987 57888999999999999999999999999999
Q ss_pred HHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCCchhHHHHH
Q 015028 102 WWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSAVQAYLL 181 (414)
Q Consensus 102 w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGhs~~lPqil 181 (414)
||++++|+++++||+||++|||||+||||||+||++++|||+||||++|++|++++||+.|++||+||+||||++|||||
T Consensus 137 w~~e~~Pe~~~~vk~lV~~Grle~~gG~Wv~~De~~~~~EslirQl~~G~~~~~~~FG~~~~~~W~pD~FG~s~~lPqil 216 (1045)
T 3bvx_A 137 FYHDLGENKKLQMKSIVKNGQLEFVTGGWVMPDEANSHWRNVLLQLTEGQTWLKQFMNVTPTASWAIAPFGHSPTMPYIL 216 (1045)
T ss_dssp HHHHSCHHHHHHHHHHHHTTSEEESSCCSSCBCSSSCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCSSSBCTHHHHHH
T ss_pred HHHHCCHHHHHHHHHHHhCCCEEEECCccccccccCCCHHHHHHHHHHHHHHHHHHhCCCCceEEcCCCCCccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCcEEEEeecchhhHhhhhcCCcceEEEE----eCCCCCCCCeeEEeecCC-CCCCCC----------CCCcccCC
Q 015028 182 GAELGFDSLYFARIDYQDRAKRLKEKNLEVVWR----GSKSLGSSSQIFTGIFPR-HYDPPD----------GFTFEIND 246 (414)
Q Consensus 182 ~~~~Gi~~~v~~R~~~~~~~~~~~~~~~eF~W~----g~d~~~~gs~V~th~~~~-~Y~~~~----------~~~~~~~~ 246 (414)
+++||++++++|++|++++.++..++++|+|+ |+| ||+||||++|. +|+.+. .|+++...
T Consensus 217 -~~~Gi~~~~~~R~~~~~~~~~~~~k~~eF~W~~~w~~~d----Gs~Ilt~~~p~~~Y~~~~~~gp~~~~c~~fdf~~l~ 291 (1045)
T 3bvx_A 217 -QKSGFKNMLIQRTHYSVKKELAQQRQLEFLWRQIWDNKG----DTALFTHMMPFYSYDIPHTCGPDPKVCCQFDFKRMG 291 (1045)
T ss_dssp -HTTTCCEEEECCCCHHHHHHHHHTTCSEEEECCTTCSSC----TTCEEEEECCSSCSSGGGTSSSCHHHHGGGCGGGSS
T ss_pred -HHcCCCeEEEecccccccccccccCCceEEEeCCCCCCC----CCeEEEEeccccccCcccccCCCccccccccccccc
Confidence 99999999999999999999888889999999 566 99999999994 775321 24443321
Q ss_pred C---CCCccCC-cccccchHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCCCchhH---HHHHHHHHHHHhcCC--C
Q 015028 247 V---SPPIQDD-VLLFDYNVEERVNDFVAAALAQANVTRTNHIMWLMGTDFRYQYANSW---FRQMDKFIHYVNKDG--R 317 (414)
Q Consensus 247 ~---~~~~~d~-~~~~~~n~~~~~~~~~~~~~~~~~~~~t~~iL~~~G~D~~~~~a~~~---~~~l~~li~~~N~~~--~ 317 (414)
. .++|.++ ..++++|+++++..+++++++.+..++++++|+|+|+||+++++..+ +++++++++++|+.+ .
T Consensus 292 ~~~~~~~~~~~p~~~~~~nv~~r~~~~~~~~~~~~~~~~t~~~l~~~G~d~~~~~~~~~~~~~~n~~~li~~in~~~~~~ 371 (1045)
T 3bvx_A 292 SFGLSCPWKVPPRTISDQNVAARSDLLVDQWKKKAELYRTNVLLIPLGDDFRFKQNTEWDVQRVNYERLFEHINSQAHFN 371 (1045)
T ss_dssp TTSCCCTTSCCCCCCCTTTHHHHHHHHHHHHHHHHTTSSSSEEEEEEEEETCSCSHHHHHHHHHHHHHHHHHHHHCGGGC
T ss_pred cccccCcccCCcccccHHHHHHHHHHHHHHHHHhhcccCCCeEEEEecCCCCCcchhhhHHHHHHHHHHHHHHhhCCCCC
Confidence 1 2444433 34567899999999999998888889999999999999999987644 899999999999875 5
Q ss_pred ceEEEcChHHHHHHHHhcC----CCCCcccccCCCCCCCCCCcccceecchhhHHHHHHHHHHHHHHHhhc-------cC
Q 015028 318 VNALYSTPSIYTDAKNAAN----EEWPLKTEDFFPYADHPNAYWTGYFTSRPALKGYVRMMSGYYLSGLVV-------IY 386 (414)
Q Consensus 318 ~~i~~sT~~~yf~~l~~~~----~~lp~~~Ge~~~~~~~~~~ywtG~ysSr~~lK~~~R~~e~~L~~ae~l-------~~ 386 (414)
+++++||+++||+++++.. ..||+++|||++|+++.+.||+|||||||++|++||++|.+|++||.| |.
T Consensus 372 ~~v~~sT~~~yf~~l~~~~~~~~~~lp~~~Ge~~~~~~~~~~yw~G~yTSr~~~K~~nR~~e~~L~~aE~l~ala~~~~~ 451 (1045)
T 3bvx_A 372 VQAQFGTLQEYFDAVHQAERAGQAEFPTLSGDFFTYADRSDNYWSGYYTSRPYHKRMDRVLMHYVRAAEMLSAWHSWDGM 451 (1045)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTSCCCCEEESCBCSCEEETTEECCGGGTSSHHHHHHHHHHHHHHHHHHHHHHTSCCCGG
T ss_pred ceEEECCHHHHHHHHHhhcccccccCcccCCcccccccCCcccccceecccHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8999999999999998753 379999999999998888999999999999999999999999999986 45
Q ss_pred CCChHHHHhh
Q 015028 387 PYIDAPVKIS 396 (414)
Q Consensus 387 ~y~~~~~~~~ 396 (414)
.||.+.|+.+
T Consensus 452 ~~~~~~L~~~ 461 (1045)
T 3bvx_A 452 ARIEERLEQA 461 (1045)
T ss_dssp GCHHHHHHHH
T ss_pred CccHHHHHHH
Confidence 7888877664
No 2
>1o7d_A Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: c.6.2.1
Probab=100.00 E-value=3.4e-76 Score=577.21 Aligned_cols=293 Identities=50% Similarity=0.918 Sum_probs=272.8
Q ss_pred eecCCCCCCCCceEEEEeecccCCccccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCcEEeechHHHHHHHHh
Q 015028 26 AYNTTAGIVPDKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRKFIYVEMAFFQRWWRQ 105 (414)
Q Consensus 26 ~~~~~~~~~~~~~~ihvV~HSH~D~~Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~kF~~~e~~~l~~w~~e 105 (414)
+|++|+...+++++||+|||||+|+||+||+++|+.++++.+.+.++.+++++||++|+++|+++|+++|++++++||++
T Consensus 2 ~~~~~~~~~~~~~~v~~v~HsH~D~gWl~t~~e~~~~~~~~i~~~~~~~~~~~vl~~l~~~p~~~F~~~e~~~~~~w~~~ 81 (298)
T 1o7d_A 2 GYKTCPKVKPDMLNVHLVPHTHDDVGWLKTVDQYFYGIYNNIQPAGVQYILDSVISSLLANPTRRFIYVEIAFFSRWWRQ 81 (298)
T ss_dssp CCTTCCCCCSSSEEEEEEEBCBCCSSSSSCHHHHHHTCCTTTCCCCHHHHHHHHHHHHHHCTTCCEEECCHHHHHHHHHT
T ss_pred CCcCCCCCCCCceEEEEeCCCCCcccccccHHHhhccccchhHHHHHHHHHHHHHHHHHHCCCCeEEEecchHhHHHHHh
Confidence 69999999999999999999999999999999999888888888889999999999999999999999999999999999
Q ss_pred cChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHHHHhCCC--CceeeecCCCCCchhHHHHHHh
Q 015028 106 QSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIKDSFGKL--PRVGWQIDPFGHSAVQAYLLGA 183 (414)
Q Consensus 106 ~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~~~fG~~--~~~~w~pD~FGhs~~lPqil~~ 183 (414)
.+|+++++||+||++||||+|||+|||+||+++++||+||||++|++|++++||+. |++||+||+||||+++|||| +
T Consensus 82 ~~Pe~~~~vk~lV~~Grle~vgG~wve~D~~~~~~eslirQl~~G~~~~~~~fG~~~~~~~~W~pD~FG~s~~lP~il-~ 160 (298)
T 1o7d_A 82 QTNATQKIVRELVRQGRLEFANGGWVMNDEATTHYGAIIDQMTLGLRFLEETFGSDGRPRVAWHIDPFGHSREQASLF-A 160 (298)
T ss_dssp SCHHHHHHHHHHHHTTSEEESSCSSSCBCSSSCCHHHHHHHHHHHHHHHHHHHGGGGCCSEEEESSSSSCCHHHHHHH-H
T ss_pred cCHHHHHHHHHHHHCCCEEEECceeeccccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCceeEeCCCCCccHHHHHHH-H
Confidence 99999999999999999999999999999999999999999999999999999997 99999999999999999999 9
Q ss_pred hcCCcEEEEeecchhhHhhhhcCCcceEEEEeCCCCC-CCCeeEEeecCCCCCCCCCCCcccCCCCCCccCCcccccchH
Q 015028 184 ELGFDSLYFARIDYQDRAKRLKEKNLEVVWRGSKSLG-SSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDVLLFDYNV 262 (414)
Q Consensus 184 ~~Gi~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~~~-~gs~V~th~~~~~Y~~~~~~~~~~~~~~~~~~d~~~~~~~n~ 262 (414)
++||++++++|+++++++.+...+.++|+|+|+++++ .||+|+||++|.+|+++.+|+|+..+.++|+.+++.++++|+
T Consensus 161 ~~Gi~~~~~~R~~~~~~~~~~~~~~~eF~W~g~~~~~~dgs~i~t~~~~~~Y~~~~g~~fd~~~~~~p~~~~~~~~~~nv 240 (298)
T 1o7d_A 161 QMGFDGFFFGRLDYQDKKVRKKTLQMEQVWRASTSLKPPTADLFTSVLPNMYNPPEGLCWDMLCADKPVVEDTRSPEYNA 240 (298)
T ss_dssp HHTCCEEEESCCCHHHHHHHHHTTCSEEEEECCSSSCTTTTEEEEEECSSTTSCCTTCCCSTTCCCCCCCCCTTSTTCCH
T ss_pred HcCCCeEEEEecccccccccccCCCceEEEECCCCCCCCCCeEEEEEeCCCCCCCCCcccccccCCcCccCCccchHHHH
Confidence 9999999999999999887666778899999995444 499999999999999999999988766677777777788999
Q ss_pred HHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCCCchhHHHHHHHHHHHHhcCCCce
Q 015028 263 EERVNDFVAAALAQANVTRTNHIMWLMGTDFRYQYANSWFRQMDKFIHYVNKDGRVN 319 (414)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~t~~iL~~~G~D~~~~~a~~~~~~l~~li~~~N~~~~~~ 319 (414)
+++++.|+++++++++.++|++||+|+|+||.+.+|..+|.|++++|+++|+++.++
T Consensus 241 ~~r~~~~~~~~~~~a~~~~t~~vl~p~G~Df~~~~a~~~f~n~~~li~~iN~~~~~~ 297 (298)
T 1o7d_A 241 KELVRYFLKLATDQGKLYRTKHTVMTMGSDFQYENANTWFKNLDKLIQLVNAQQRAN 297 (298)
T ss_dssp HHHHHHHHHHHHHHHTTSSSSEEEEEECCBTCCTTHHHHHHHHHHHHHHHHC-----
T ss_pred HHHHHHHHHHHHHHHhhcCCCcEEeccCCCCCccchhHHHHHHHHHHHHHhhcCccC
Confidence 999999999999999999999999999999999999999999999999999876543
No 3
>2wyh_A Alpha-mannosidase; hydrolase, glycosidase, glycoside hydrolase; 1.90A {Streptococcus pyogenes} PDB: 2wyi_A*
Probab=100.00 E-value=1.9e-72 Score=626.02 Aligned_cols=327 Identities=17% Similarity=0.213 Sum_probs=289.3
Q ss_pred ecCCCCCCCCceEEEEeecccCCccccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCc-EEeechHHHHHHHHh
Q 015028 27 YNTTAGIVPDKINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRK-FIYVEMAFFQRWWRQ 105 (414)
Q Consensus 27 ~~~~~~~~~~~~~ihvV~HSH~D~~Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~k-F~~~e~~~l~~w~~e 105 (414)
||++++.+.++++||+|||||||+||+||+++|+. ++.+++++||++|++||+++ |++++++++.+||++
T Consensus 15 ~~~~~~~~~~~~~v~~v~HsH~D~~Wl~t~~~~~~---------~~~~~~~~vl~~l~~~p~~~~F~~~~q~~~~~~~~~ 85 (923)
T 2wyh_A 15 EVLFQGPAMATKKVHIISHSHWDREWYMAYEQHHM---------RLINLIDDLLEVFQTDPDFHSFHLDGQTIILDDYLK 85 (923)
T ss_dssp HHHSCCCCCCCEEEEEEEBCBCCSSSSSCHHHHHH---------HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHH
T ss_pred hhccCCCCCCceEEEEEccCCCCcccccHHHHHHH---------HHHHHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHH
Confidence 78899999999999999999999999999999987 89999999999999999998 888775555578899
Q ss_pred cChHHHHHHHHHHHCCCeEEeccee-eecccCCCChHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCCchhHHHHHHhh
Q 015028 106 QSKAMKVKVKGLVDSGQLEFINGGM-CMHDEASPHYIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAE 184 (414)
Q Consensus 106 ~~pe~~~~vk~lV~~GRlE~vgG~W-vq~De~l~~gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~ 184 (414)
++|+++++||+||++||||+ ||| ||+||++++|||+||||++|++|+++ ||+.|++||+||+||||++||||| ++
T Consensus 86 ~~p~~~~~vk~lV~~Grlei--G~wYv~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~pD~FG~s~~lPqil-~~ 161 (923)
T 2wyh_A 86 VRPEREPEIRQAIASGKLRI--GPFYILQDDFLTSSESNVRNMLIGKEDCDR-WGASVPLGYFPDTFGNMGQTPQLM-LK 161 (923)
T ss_dssp HCGGGHHHHHHHHHTTSEEC--CSBSSCBCSTTSCHHHHHHHHHHHHHHHHH-HTCCCSSEEESSCSSBCTTHHHHH-HT
T ss_pred HCHHHHHHHHHHHHcCCEEE--eeeeeccccccCCHHHHHHHHHHHHHHHHH-cCCCCceeEecCCCCcchHHHHHH-HH
Confidence 99999999999999999985 788 99999999999999999999999999 999999999999999999999999 99
Q ss_pred cCCcEEEEeecc----hhhH---hhhhcCCcceEEEEeCCCCCCCCeeEEeecCCCCCCCCCCCcccCCCCCCccCCccc
Q 015028 185 LGFDSLYFARID----YQDR---AKRLKEKNLEVVWRGSKSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDVLL 257 (414)
Q Consensus 185 ~Gi~~~v~~R~~----~~~~---~~~~~~~~~eF~W~g~d~~~~gs~V~th~~~~~Y~~~~~~~~~~~~~~~~~~d~~~~ 257 (414)
+||++++++|++ |+++ ..+...++++|+|+|+| ||+||||++|.+|+++..+. .
T Consensus 162 ~Gi~~~~~~R~~~~~~~n~~~~~~~~~~~~~~eF~W~g~d----Gs~Ilt~~~p~~Y~~g~~~~---------------~ 222 (923)
T 2wyh_A 162 AGLQAAAFGRGIRPTGFNNQVDTSEKYSSQFSEISWQGPD----NSRILGLLFANWYSNGNEIP---------------T 222 (923)
T ss_dssp TTCCEEEECSSCEECCSSSCCCTTCTTEESSSEEEEECTT----CCEEEEEECTTCTTTTCSCC---------------S
T ss_pred cCCCEEEEEeccccccccccccchhhccCCCceEEEECCC----CCeEEEEECCCCccCCCCCC---------------C
Confidence 999999999999 7754 22334578999999999 99999999999998764332 1
Q ss_pred ccchHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCCCchhHHHHHHHHHHHHhc-CCCceEEEcChHHHHHHHHhc-
Q 015028 258 FDYNVEERVNDFVAAALAQANVTRTNHIMWLMGTDFRYQYANSWFRQMDKFIHYVNK-DGRVNALYSTPSIYTDAKNAA- 335 (414)
Q Consensus 258 ~~~n~~~~~~~~~~~~~~~~~~~~t~~iL~~~G~D~~~~~a~~~~~~l~~li~~~N~-~~~~~i~~sT~~~yf~~l~~~- 335 (414)
++.++++++.++++.+++. ++++++|+|+|+||+++. .+|+++++++|+ .+.+++++||+++||+++++.
T Consensus 223 ~~~~v~~~~~~~~~~~~~~---~~t~~~l~~~G~D~~~~~-----~~~~~~i~~~n~~~~~~~~~~sT~~~yf~~l~~~~ 294 (923)
T 2wyh_A 223 TEAEARLFWDKKLADAERF---ASTKHLLMMNGCDHQPVQ-----LDVTKAIALANQLYPDYEFVHSCFEDYLADLADDL 294 (923)
T ss_dssp SHHHHHHHHHHHHHHHHHH---CSSSEEEEEECCBTCCCC-----TTHHHHHHHHHHHCTTEEEEECCHHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHhc---CCCCeEEEEeecCCCCcc-----hhHHHHHHHHHhhCCCceEEECCHHHHHHHHHhhc
Confidence 2467778888877766544 899999999999997754 689999999998 578999999999999999875
Q ss_pred CCCCCcccccCCCCCCCCCCcc-c--ceecchhhHHHHHHHHHHHH-HHHhhc-------cCCCChHHHHhh
Q 015028 336 NEEWPLKTEDFFPYADHPNAYW-T--GYFTSRPALKGYVRMMSGYY-LSGLVV-------IYPYIDAPVKIS 396 (414)
Q Consensus 336 ~~~lp~~~Ge~~~~~~~~~~yw-t--G~ysSr~~lK~~~R~~e~~L-~~ae~l-------~~~y~~~~~~~~ 396 (414)
...||+++|||+.+. +++| | ||||||+++|++||++|++| +.||.| |.+||.+.|+.+
T Consensus 295 ~~~lp~~~GEl~~~~---~~~W~th~G~~tSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~L~~~ 363 (923)
T 2wyh_A 295 PENLSTVQGEITSQE---TDGWYTLANTASARIYLKQANTRVSRQLENITEPLAAMAYEVTSTYPHDQLRYA 363 (923)
T ss_dssp CSCCCEEESCBSCTT---SCSSSSCGGGGGTTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred cccCceecccccCcc---cccceecCCEeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHH
Confidence 468999999998654 3445 4 99999999999999999999 689875 568999988774
No 4
>3lvt_A Glycosyl hydrolase, family 38; PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.55A {Enterococcus faecalis}
Probab=100.00 E-value=3.1e-69 Score=597.68 Aligned_cols=320 Identities=18% Similarity=0.196 Sum_probs=248.0
Q ss_pred ceEEEEeecccCCccccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCcEEeec-hHHHHHHHHhcChHHHHHHH
Q 015028 37 KINVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRKFIYVE-MAFFQRWWRQQSKAMKVKVK 115 (414)
Q Consensus 37 ~~~ihvV~HSH~D~~Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~kF~~~e-~~~l~~w~~e~~pe~~~~vk 115 (414)
+++||+|||||||+||+||+++|+. ++.+++++||++|+++|+++|++.| +.++.+||++.+|+++++||
T Consensus 6 ~~~v~~v~HsH~D~~Wl~t~~e~~~---------~~~~~~~~~l~~l~~~p~~~f~~~~~q~~~~~~~~~~~p~~~~~vk 76 (899)
T 3lvt_A 6 KKKVYIVSHSHWDREWYLPYEEHHM---------RLIELVDNVLDLIENDPEFNSFHLDGQTIILDDYLQVRPEKKEAVK 76 (899)
T ss_dssp CEEEEEEEEECC----CCCHHHHHH---------HHHHHHHHHHHHHHHCTTCCCEECTTBTHHHHHHHHHCGGGHHHHH
T ss_pred cceEEEECCCCCChHhcCcHHHHHH---------HHHHHHHHHHHHHHhCCCceEEEEcccHHHHHHHHhhCHHHHHHHH
Confidence 5699999999999999999999987 8999999999999999999999875 55666788999999999999
Q ss_pred HHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCCchhHHHHHHhhcCCcEEEEeec
Q 015028 116 GLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELGFDSLYFARI 195 (414)
Q Consensus 116 ~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~Gi~~~v~~R~ 195 (414)
+||++|||| |||+|||+||+++++||+||||++|++|+++ ||+.|++||+||+||||++||||| +++||++++++|+
T Consensus 77 ~lv~~Gr~e-igg~~v~~D~~~~~~es~irq~~~G~~~~~~-fG~~~~~~w~~D~FG~s~~lp~i~-~~~Gi~~~~~~Rg 153 (899)
T 3lvt_A 77 KAVQAGKLK-IGPFYILQDDFLISSESNVRNMLIGHLESQK-WGAPVQLGYFPDTFGNMGQTPQMM-QLANLPAAAFGRG 153 (899)
T ss_dssp HHHHTTSEE-CCSBSSCCCGGGSCHHHHHHHHHHHHHHHHH-HTCCCCCEEESCCCT---THHHHH-HTTTCCEEEEC--
T ss_pred HHHHcCCEE-ECchhccccccCCCHHHHHHHHHHHHHHHHH-cCCCCceeEeCCCCCCchHHHHHH-HHcCCCeEEEecc
Confidence 999999999 8999999999999999999999999999999 999999999999999999999999 9999999999998
Q ss_pred c----hhhHhh--hhcCCcceEEEEeCCCCCCCCeeEEeecCCCCCCCCCCCcccCCCCCCccCCcccccchHHHHHHHH
Q 015028 196 D----YQDRAK--RLKEKNLEVVWRGSKSLGSSSQIFTGIFPRHYDPPDGFTFEINDVSPPIQDDVLLFDYNVEERVNDF 269 (414)
Q Consensus 196 ~----~~~~~~--~~~~~~~eF~W~g~d~~~~gs~V~th~~~~~Y~~~~~~~~~~~~~~~~~~d~~~~~~~n~~~~~~~~ 269 (414)
. ++.+.. ....++++|+|+|+| ||+||||+++.+|+++..+. ...++++.+++++
T Consensus 154 ~~~~~~~~~k~~~~~~~p~~~F~W~g~d----Gs~vlt~~~~~~Y~~g~~~p---------------~~~~~~~~~~~~~ 214 (899)
T 3lvt_A 154 VKPIGFDNQVLESDYSSQYSEMWWEGPD----QTKIFGLLFANWYSNGNEIP---------------SEKEAAIAFWKQK 214 (899)
T ss_dssp -------------------CEEEEECTT----SCEEEEEECCCC----CCSC---------------SSHHHHHHHHHHH
T ss_pred cccccccccccccccCCCCceEEEECCC----CCeEEEEECCCcCcCccCCC---------------CcHHHHHHHHHHH
Confidence 6 332211 112367899999999 99999999999998753321 1235667777776
Q ss_pred HHHHHHhhhhcCCCceEEEeecCCCCCCchhHHHHHHHHHHHHhc-CCCceEEEcChHHHHHHHHhcC-CCCCcccccCC
Q 015028 270 VAAALAQANVTRTNHIMWLMGTDFRYQYANSWFRQMDKFIHYVNK-DGRVNALYSTPSIYTDAKNAAN-EEWPLKTEDFF 347 (414)
Q Consensus 270 ~~~~~~~~~~~~t~~iL~~~G~D~~~~~a~~~~~~l~~li~~~N~-~~~~~i~~sT~~~yf~~l~~~~-~~lp~~~Ge~~ 347 (414)
++.+++ .++++++|+|+|+|+++. +++|+++++++|+ .+.+++++||+++||+++++.. ..||+++|||+
T Consensus 215 ~~~~~~---~~~t~~il~~~G~D~~p~-----~~~l~~~i~~~n~~~p~~~~~~st~~~yf~~l~~~~~~~lp~~~GEl~ 286 (899)
T 3lvt_A 215 LADVER---YASTNHLLMMNGVDHQPV-----QRDITKAIALANELFPEYEFIHSNFDDYLKAVQEELPEDLGTVTGELT 286 (899)
T ss_dssp HHHHHH---HCSSSEEEEEEEEC-----------CHHHHHHHHHHHCSSEEEEECCHHHHHHHHHHTCC--CCEEECCC-
T ss_pred HHHHHh---hcCCCeEEEeecCCCCch-----HHHHHHHHHHHHhcCCCceEEEcCHHHHHHHHHHhccccCCccccccc
Confidence 665544 378999999999997432 4899999999997 4689999999999999999876 78999999998
Q ss_pred CCCCCCCCccc-ceecchhhHHHHHHHHHHHHH-HHhhc-------cCCCChHHHHhh
Q 015028 348 PYADHPNAYWT-GYFTSRPALKGYVRMMSGYYL-SGLVV-------IYPYIDAPVKIS 396 (414)
Q Consensus 348 ~~~~~~~~ywt-G~ysSr~~lK~~~R~~e~~L~-~ae~l-------~~~y~~~~~~~~ 396 (414)
++..+ ..||+ |+||||+++|++||++|.+|+ +||.| |..||.+.++.+
T Consensus 287 ~~~~~-G~yt~~~~~sSr~~~K~~nR~~E~~L~~~aE~l~~la~~~g~~yp~~~l~~~ 343 (899)
T 3lvt_A 287 SQETD-GWYTLANTSSARVYLKQWNTKVQRQLENIAEPLAAMAYEVTGDYPHDQFDYA 343 (899)
T ss_dssp -----------CGGGGBTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCCCHHHHHHH
T ss_pred ccccC-ceEEECCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHH
Confidence 65421 12444 667799999999999999998 68875 568999888764
No 5
>1k1x_A 4-alpha-glucanotransferase; 2.40A {Thermococcus litoralis} SCOP: a.8.3.2 b.30.5.8 c.6.2.2 PDB: 1k1w_A 1k1y_A*
Probab=99.87 E-value=6.7e-21 Score=204.10 Aligned_cols=145 Identities=16% Similarity=0.161 Sum_probs=132.9
Q ss_pred ceEEEEeecccCCcc-ccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCcEEeechHHHHHHHHhcChHHHHHHH
Q 015028 37 KINVHLVPHSHDDVG-WLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRKFIYVEMAFFQRWWRQQSKAMKVKVK 115 (414)
Q Consensus 37 ~~~ihvV~HSH~D~~-Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~kF~~~e~~~l~~w~~e~~pe~~~~vk 115 (414)
+..|++|.|+|+|.. |.|.+++ .+.+.+..++++|+++|++||...-++.+.+|+++.+|+..+++|
T Consensus 3 ~~~l~lv~H~HqP~~~~~~~~e~------------a~~~~Y~pll~ll~~~~~~k~~~~~s~~ll~~l~~~~p~l~~~ik 70 (659)
T 1k1x_A 3 RINFIFGIHNHQPLGNFGWVFEE------------AYNRSYRPFMEILEEFPEMKVNVHFSGPLLEWIEENKPDYLDLLR 70 (659)
T ss_dssp CEEEEEEEEECCCTTCCHHHHHH------------HHHHTHHHHHHHHTTCTTCCEEEEECHHHHHHHHHHCHHHHHHHH
T ss_pred ceEEEEEEEccCCCccCcHHHHH------------HHHHHHHHHHHHHHhCCCcEEEEEccHHHHHHHHHHCHHHHHHHH
Confidence 478999999999999 5566553 456788999999999999999965568888899999999999999
Q ss_pred HHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCCchhHHHHHHhhcCCcEEEEeec
Q 015028 116 GLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELGFDSLYFARI 195 (414)
Q Consensus 116 ~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~Gi~~~v~~R~ 195 (414)
+++++||+|++||+|++||..++++|++++|+..|+++++ .||++|+..|+||+ ++++++|+|| +++||+++++...
T Consensus 71 ~l~~~G~vE~l~~~~~Hpi~~l~p~e~~~~QI~~g~~~~~-~FG~~P~G~WlPE~-~ys~~l~~iL-~~~Gi~y~~td~~ 147 (659)
T 1k1x_A 71 SLIKRGQLEIVVAGFYEPVLAAIPKEDRLVQIEMLKDYAR-KLGYDAKGVWLTER-VWQPELVKSL-REAGIEYVVVDDY 147 (659)
T ss_dssp HHHHTTCEEEEBCCTTCCCGGGSCHHHHHHHHHHHHHHHH-HTTCCCCEEECGGG-CBCTTHHHHH-HHTTCCEEEEEHH
T ss_pred HHHHCCCEEEEccCcccccccCCCHHHHHHHHHHHHHHHH-HcCCCCCEEECccc-ccChhHHHHH-HHcCCcEEEECch
Confidence 9999999999999999999999999999999999999999 99999999999999 5999999999 9999999999874
Q ss_pred c
Q 015028 196 D 196 (414)
Q Consensus 196 ~ 196 (414)
+
T Consensus 148 ~ 148 (659)
T 1k1x_A 148 H 148 (659)
T ss_dssp H
T ss_pred h
Confidence 3
No 6
>1o7d_B Lysosomal alpha-mannosidase; hydrolase, glycosyl hydrolase family 38; HET: NAG BMA MAN NDG; 2.70A {Bos taurus} SCOP: a.8.3.1 c.6.2.1
Probab=99.81 E-value=2.8e-20 Score=147.25 Aligned_cols=68 Identities=51% Similarity=0.912 Sum_probs=65.7
Q ss_pred CceEEEcChHHHHHHHHhcCCCCCcccccCCCCCCCCCCcccceecchhhHHHHHHHHHHHHHHHhhc
Q 015028 317 RVNALYSTPSIYTDAKNAANEEWPLKTEDFFPYADHPNAYWTGYFTSRPALKGYVRMMSGYYLSGLVV 384 (414)
Q Consensus 317 ~~~i~~sT~~~yf~~l~~~~~~lp~~~Ge~~~~~~~~~~ywtG~ysSr~~lK~~~R~~e~~L~~ae~l 384 (414)
.++++||||++||+++++.+..+|+++||||||+++.++||||||||||.+|+++|++|..|++||.|
T Consensus 2 ~v~v~ysT~s~Yf~al~~~~~~~p~~~~DFfpYad~~~~yWtGyyTSRp~lK~~~R~~~~~L~~ae~L 69 (84)
T 1o7d_B 2 RVNVLYSTPACYLWELNKANLSWSVKKDDFFPYADGPYMFWTGYFSSRPALKRYERLSYNFLQVCNQL 69 (84)
T ss_dssp CEEEEECCHHHHHHHHHHTCCCBCEECSCCCSCCSBTTBCSCGGGTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCHHHHHHHHHHhCCCCcccCCCcccccCCCCCcceeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999999988899999999999999999999999999999999999999999999987
No 7
>3n98_A Alpha-amylase, GH57 family; GH57 family member, branching enzyme, transferase; HET: BGC PG4; 1.87A {Thermococcus kodakarensis} PDB: 3n92_A* 3n8t_A*
Probab=98.90 E-value=1.5e-08 Score=105.63 Aligned_cols=90 Identities=17% Similarity=0.156 Sum_probs=84.1
Q ss_pred HhcChHHHHHHHHHHHCCCeEEecceeeecccCCCC-hHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCCch-------
Q 015028 104 RQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPH-YIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSA------- 175 (414)
Q Consensus 104 ~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~-gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGhs~------- 175 (414)
++..++..+.+|+|++.|++|+++++++.+-.-+.. .|++..|+..|.+.+++.||.+|+..|+|.+ +++.
T Consensus 117 ~~~~~dii~~fr~L~~~G~iElit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~~ 195 (562)
T 3n98_A 117 KAINGDIIGKLRELQDQGYVEVITSAATHGYLPLLGRDEAIRAQIANGVATYEKHFGMKPKGIWLPEC-AYRPAGEWELP 195 (562)
T ss_dssp HHTTTCHHHHHHHHHHTTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCSBEECGGG-CBCCSEEEECG
T ss_pred HHhhhHHHHHHHHHHHCCCEEEEcCCchhhHhhcCCCHHHHHHHHHHHHHHHHHHcCCCCCEEECccc-ceeCccccccc
Confidence 556889999999999999999999999999988776 8999999999999999999999999999999 9998
Q ss_pred --------hHHHHHHhhcCCcEEEEeec
Q 015028 176 --------VQAYLLGAELGFDSLYFARI 195 (414)
Q Consensus 176 --------~lPqil~~~~Gi~~~v~~R~ 195 (414)
.+..+| +++||+++++.-.
T Consensus 196 ~~~~~~~~~i~~~L-~~~Gi~y~~vd~~ 222 (562)
T 3n98_A 196 GGRKVKRQGIEKFL-EEFGLRYFFVESR 222 (562)
T ss_dssp GGCEEEECCHHHHH-HTTTCCEEEECHH
T ss_pred cccccchhhHHHHH-HHcCCeEEEECch
Confidence 999999 9999999998754
No 8
>3p0b_A TT1467 protein; glycoside hydrolase GH57, glycogen branching, transferase; 1.35A {Thermus thermophilus} PDB: 1ufa_A
Probab=98.86 E-value=1.8e-08 Score=104.53 Aligned_cols=90 Identities=16% Similarity=0.111 Sum_probs=84.2
Q ss_pred HhcChHHHHHHHHHHHCCCeEEecceeeecccCCC-ChHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCCch-------
Q 015028 104 RQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASP-HYIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSA------- 175 (414)
Q Consensus 104 ~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~-~gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGhs~------- 175 (414)
+...++..+.+|+|+++|++|+++++++.+-.-+. ..|++..|+..|.+.+++.||.+|+..|+|.+ +++.
T Consensus 138 ~~~~~dii~~fr~L~~~G~iEiit~~~tH~~lPLl~~~e~~~~QI~~g~~~~~~~FG~~P~G~WlpE~-ay~~~~~~~~~ 216 (540)
T 3p0b_A 138 QRLSGDLVAAFRKAEEGGQVELITSNATHGYSPLLGYDEALWAQIKTGVSTYRRHFAKDPTGFWLPEM-AYRPKGPWKPP 216 (540)
T ss_dssp HHTTTCHHHHHHHHHHHTSEEEEEECTTCBCGGGCSCHHHHHHHHHHHHHHHHHHHSSCCCBEECGGG-CBCCSEEECCS
T ss_pred HHhhHHHHHHHHHHHHCCCEEEEcCCchhhHHhcCCCHHHHHHHHHHHHHHHHHHhCCCCCEEECccc-ceeCccccccc
Confidence 55688999999999999999999999999998888 58999999999999999999999999999999 9998
Q ss_pred ----------hHHHHHHhhcCCcEEEEeec
Q 015028 176 ----------VQAYLLGAELGFDSLYFARI 195 (414)
Q Consensus 176 ----------~lPqil~~~~Gi~~~v~~R~ 195 (414)
.+.++| +++||+++++.--
T Consensus 217 ~~~~~~~~~~~l~~~L-~~~Gi~y~~vd~~ 245 (540)
T 3p0b_A 217 VEGPPEGVRPGVDELL-MRAGIRYTFVDAH 245 (540)
T ss_dssp SSCSCCEEECCHHHHH-HHTTCCEEEECTH
T ss_pred cccccccchhhHHHHH-HHcCCeEEEECch
Confidence 999999 9999999998754
No 9
>2b5d_X Alpha-amylase; (beta/alpha)7 barrel, hydrolase; 2.20A {Thermotoga maritima} SCOP: a.8.3.3 c.6.2.4
Probab=98.85 E-value=2.6e-08 Score=104.18 Aligned_cols=152 Identities=12% Similarity=0.057 Sum_probs=116.2
Q ss_pred eEEEEeecccCCccccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCcEEeechHHHHHHHHh------------
Q 015028 38 INVHLVPHSHDDVGWLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRKFIYVEMAFFQRWWRQ------------ 105 (414)
Q Consensus 38 ~~ihvV~HSH~D~~Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~kF~~~e~~~l~~w~~e------------ 105 (414)
+.|.+|-|.|+-..--....+|. ...+....+.+.+-.++..|++.|++|++++=+..|.+++++
T Consensus 3 ~~l~lvlH~HqP~~~~~~~~~~~---~e~W~~~~~~~~Y~pll~~l~~~~~~k~t~~lSP~LleqL~d~~l~~r~~~~l~ 79 (528)
T 2b5d_X 3 GKILIFLHAHLPYVHHPEYDHFL---EERWLFEAITETYIPLLMMFDEIEDFRLTMSITPPLMEMLSSRDLQEKYERHME 79 (528)
T ss_dssp EEEEEEEEECCCCCCCTTCSSCT---THHHHHHHHHHTHHHHHHHHHHSSCCCEEEEECHHHHHHHHCHHHHHHHHHHHH
T ss_pred eeEEEEEECCCCCccCCCCCCcC---cChHHHHHHHHHHHHHHHHHHhCcCccEEEEECHHHHHHHhChhhhhhHHHHHH
Confidence 67889999998652110000000 011112356677888999999999998887554555444442
Q ss_pred ----------------------------------------cChHHHHHHHHHHHCCCeEEecceeeecccCCCC--hHHH
Q 015028 106 ----------------------------------------QSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPH--YIDM 143 (414)
Q Consensus 106 ----------------------------------------~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~--gEsl 143 (414)
..++..+.+|+|++.|++|+++++++-+=.-+.. .|++
T Consensus 80 ~~~~~~~~e~~~~~~~~~~~~~la~~~~~~~~~~~~~~~~~~~~li~~~r~L~~~G~vEll~~~y~H~ilPLl~d~~ed~ 159 (528)
T 2b5d_X 80 KLIELANKEVERTKKEHPLKHKMAKFYREHFEKILNVFRSYDGNILEGFKKYQETGKLEIVTCNATHAFLPLYQMYPEVV 159 (528)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHTTTCTHHHHHHHHHHTSEEEEEECTTCBCGGGGTTCHHHH
T ss_pred HHHHHHhhhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHCCCEEEEcCchhhHHHHhcCCCHHHH
Confidence 2334457789999999999999999888776655 7999
Q ss_pred HHHHHHHHHHHHHHhCCCCceeeecCCCCCchhHHHHHHhhcCCcEEEEee
Q 015028 144 IDQTTLGHWFIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELGFDSLYFAR 194 (414)
Q Consensus 144 Irql~~G~~~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~Gi~~~v~~R 194 (414)
..|+..|.+.+++.||.+|+..|+|.+ +.+..+..+| +++||+++++.-
T Consensus 160 ~~QI~~g~~~~~~~FG~~P~G~WlpE~-a~~~~l~~~l-~~~Gi~y~i~d~ 208 (528)
T 2b5d_X 160 NAQITVGVKNYEKHMKKHPRGIWLAEC-GYYQGLDLYL-AQNNVEYFFVDS 208 (528)
T ss_dssp HHHHHHHHHHHHHHHSSCCSEEECGGG-CBCTTHHHHH-HHTTCCEEEECT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEECchh-ccChhHHHHH-HHcCCeEEEECc
Confidence 999999999999999999999999998 8888999999 999999999876
No 10
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=96.21 E-value=0.35 Score=46.15 Aligned_cols=112 Identities=14% Similarity=0.037 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHcCCC-CcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHH
Q 015028 73 QNVLDSVISALFEDKN-RKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGH 151 (414)
Q Consensus 73 ~~~l~~vl~~L~~~p~-~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~ 151 (414)
..-+..++++|+++.- .+|+... ..+ +.+| +.+|+++++| .||.+=+|.-.+....+.+.+.++|..+.
T Consensus 61 ~~~~~rll~ll~~~~v~aTfFv~g-~~~-----~~~p---~~v~~~~~~G-hEIg~H~~~H~~~~~~s~~~~~~ei~~~~ 130 (300)
T 3rxz_A 61 LVGVPRLLGILDEFNVPGTFFVPG-YTA-----HRHP---EPIRSIARAG-HEIAHHGYLHESLVGADEDTERKILTRGI 130 (300)
T ss_dssp HTHHHHHHHHHHHTTCCEEEEECH-HHH-----HHSH---HHHHHHHHTT-CEEEECCSSCCCCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEH-HHH-----hhCH---HHHHHHHHcC-CEEEecCCCCcccccCCHHHHHHHHHHHH
Confidence 4567889999999853 4566543 222 3445 6789999999 78988889777777789999999999999
Q ss_pred HHHHHHhCCCCceeeecCCCCCchhHHHHHHhhcCCcEEEEeecc
Q 015028 152 WFIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELGFDSLYFARID 196 (414)
Q Consensus 152 ~~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~Gi~~~v~~R~~ 196 (414)
+.+++.+|..|+. |-+=-.-.+..+.+++ +++|+.+..-.+..
T Consensus 131 ~~l~~~~G~~p~~-fr~P~g~~~~~~~~~l-~e~G~~ydss~~~~ 173 (300)
T 3rxz_A 131 EALEEVAGVHPVG-YRAPMWEMNWHTPKLL-AEFGFLYDSTLMDS 173 (300)
T ss_dssp HHHHHHHSCCCCE-ECCGGGCCCTTHHHHH-HHTTCSEECCCCSC
T ss_pred HHHHHHhCCCCcE-EECCCCCCCHHHHHHH-HHcCCEEEeeccCC
Confidence 9999989988753 4332233567889999 99999987766653
No 11
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=95.65 E-value=1.7 Score=41.97 Aligned_cols=221 Identities=14% Similarity=0.064 Sum_probs=128.5
Q ss_pred HHHHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHH
Q 015028 74 NVLDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHW 152 (414)
Q Consensus 74 ~~l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~ 152 (414)
.-+..++++|+++. ..+|+... . + .+.+| +.||+++++| .||-+=+|.-.+....+.+.+.++|..+.+
T Consensus 86 ~~~~rll~lL~~~~v~aTfFv~g-~----~-~~~~p---~~v~~i~~~G-hEIg~H~~~H~~~~~ls~~~~~~ei~~~~~ 155 (321)
T 3s6o_A 86 AGVWRILREFDKRGLPLTVFGVG-M----A-IERHP---ELARAFVELG-HEIACHGWRWIHYQDMTPEREAEHMRLGME 155 (321)
T ss_dssp THHHHHHHHHHHHTCCCEEEECH-H----H-HHHCH---HHHHHHHHTT-CEEEECCSSCSCCTTCCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHcCCCEEEEEEH-H----H-hhhCH---HHHHHHHHcC-CEEeeCCccccccccCCHHHHHHHHHHHHH
Confidence 45678999999884 35677553 2 2 23456 5788999999 788888887777777889999999999999
Q ss_pred HHHHHhCCCCceeeecCCCCCchhHHHHHHhhcC-CcEEEEeecchhhHhhhhcCCcceEEEEeCCCCCCCCeeEEeecC
Q 015028 153 FIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELG-FDSLYFARIDYQDRAKRLKEKNLEVVWRGSKSLGSSSQIFTGIFP 231 (414)
Q Consensus 153 ~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~G-i~~~v~~R~~~~~~~~~~~~~~~eF~W~g~d~~~~gs~V~th~~~ 231 (414)
.+++..|..|+ +|- .-.++..+.+++ +++| |.+-.-++... ..|+-+..+.. |...-...+|
T Consensus 156 ~l~~~~G~~p~-g~r--~g~~s~~t~~ll-~e~G~f~Ydss~~~dd-----------~Py~~~~~~~~--g~~~~l~~iP 218 (321)
T 3s6o_A 156 AIERVTGVRPL-GWY--TGRDSPNTHRLV-AEYGGFLYDSDHYGDD-----------LPFWMDVEVSG--GASVPQLIVP 218 (321)
T ss_dssp HHHHHHSCCCC-EEC--CSSCCTTHHHHH-HHHCCCSEECCCCSCS-----------SCEEEEEECTT--SCEEEEEECC
T ss_pred HHHHHhCCCcc-cEE--CCCCCHHHHHHH-HHcCCeEEEEeccCCC-----------CCcceeccCcC--CCCCCEEEEe
Confidence 99998998876 444 335778899999 9999 99887665431 12333332211 3322222356
Q ss_pred CCCCCCCCCCcccCCCCCCccCCcccccchHHHHHHHHHHHHHHhhhhcCCCceEEEeecCCCCCCchhHHHHHHHHHHH
Q 015028 232 RHYDPPDGFTFEINDVSPPIQDDVLLFDYNVEERVNDFVAAALAQANVTRTNHIMWLMGTDFRYQYANSWFRQMDKFIHY 311 (414)
Q Consensus 232 ~~Y~~~~~~~~~~~~~~~~~~d~~~~~~~n~~~~~~~~~~~~~~~~~~~~t~~iL~~~G~D~~~~~a~~~~~~l~~li~~ 311 (414)
...... ++... ....-.+...+.+.+.+-++.+.+. ..+.+ .++.++--....+.+.....+++++++
T Consensus 219 ~t~~~~---D~~~~------~~~g~~~~~~~~~~l~~~Fd~~y~e--g~~ap-~~~~i~lH~~~~g~p~r~~~le~fL~~ 286 (321)
T 3s6o_A 219 YTLDAN---DMRFA------TPQGFNTADHFFHYLRDAFDVLYEE--GDEAP-KMMSIGMHCRLLGRPGRFRALQRFLDH 286 (321)
T ss_dssp CCSSSB---GGGGS------SSSCCCSHHHHHHHHHHHHHHHHHH--TTTSC-EEEEEEEETTTTTSHHHHHHHHHHHHH
T ss_pred EeeeeC---Ceeee------cCCCCCCHHHHHHHHHHHHHHHHHh--CCCCC-ceEEEEeChHHcCCHHHHHHHHHHHHH
Confidence 322110 00000 0000001122223333322222111 11112 233444222222222345788999999
Q ss_pred HhcCCCceEEEcChHHHHHHHHhc
Q 015028 312 VNKDGRVNALYSTPSIYTDAKNAA 335 (414)
Q Consensus 312 ~N~~~~~~i~~sT~~~yf~~l~~~ 335 (414)
+.+.++ |.+.|..+..+..++.
T Consensus 287 i~~~~~--Vw~~t~~eia~~~~~~ 308 (321)
T 3s6o_A 287 IERHDR--VWVARRVEIARHWREH 308 (321)
T ss_dssp HHTCSS--EEECCHHHHHHHHHHH
T ss_pred HHhCCC--EEEEcHHHHHHHHHhh
Confidence 987654 6788998888877664
No 12
>3cl6_A PUUE allantoinase; URIC acid, nitrogen fixation, hydrolase; 1.58A {Pseudomonas fluorescens} PDB: 3cl7_A 3cl8_A 1z7a_A
Probab=94.37 E-value=0.33 Score=46.59 Aligned_cols=108 Identities=14% Similarity=0.062 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHH
Q 015028 74 NVLDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHW 152 (414)
Q Consensus 74 ~~l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~ 152 (414)
..+..++++|+++. ..+|+... ..+ +.+| +.+|+++++| .||-+=+|.-++....+.|.+.++|..+.+
T Consensus 81 ~~~~~ll~iL~~~~v~aTfFv~g-~~~-----~~~p---~~v~~i~~~G-heIg~Ht~~H~~~~~~s~~~~~~ei~~~~~ 150 (308)
T 3cl6_A 81 AGVWRILKLFKAFDIPLTIFAVA-MAA-----QRHP---DVIRAMVAAG-HEICSHGYRWIDYQYMDEAQEREHMLEAIR 150 (308)
T ss_dssp THHHHHHHHHHHTTCCCEEEECH-HHH-----HHCH---HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHcCCCEEEEeEH-HHH-----HHCH---HHHHHHHHcC-CEEEeCCCCCcccccCCHHHHHHHHHHHHH
Confidence 35678999999984 35676543 222 3455 5789999999 688888897767667889999999999999
Q ss_pred HHHHHhCCCCceeeecCCCCCchhHHHHHHhhcC-CcEEEEeec
Q 015028 153 FIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELG-FDSLYFARI 195 (414)
Q Consensus 153 ~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~G-i~~~v~~R~ 195 (414)
.+++.+|..|+ +|-+ + .++..+..++ ++.| +.+..-.+.
T Consensus 151 ~l~~~~G~~p~-g~r~-~-~~~~~~~~~l-~~~G~~~y~ss~~~ 190 (308)
T 3cl6_A 151 ILTELTGERPL-GWYT-G-RTGPNTRRLV-MEEGGFLYDCDTYD 190 (308)
T ss_dssp HHHHHHSSCCS-EECC-S-SCCTTHHHHH-HHHCCCSEECCCCC
T ss_pred HHHHHhCCCcc-eEEC-C-CCCHHHHHHH-HHCCCceEEeccCC
Confidence 99999998876 4554 2 5678899999 8999 988765553
No 13
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=93.29 E-value=0.5 Score=42.04 Aligned_cols=102 Identities=18% Similarity=0.209 Sum_probs=76.3
Q ss_pred HHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHH
Q 015028 76 LDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFI 154 (414)
Q Consensus 76 l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l 154 (414)
...+++.|+++. ..+|+... . | .+.+| +.+|+++++| .|+-+=+|.-++....+.+.+.+++....+.+
T Consensus 19 ~~~il~iL~~~~v~aTfFv~g-~----~-~~~~~---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 88 (195)
T 2cc0_A 19 TQSLLNALRQNGLRATMFNQG-Q----Y-AAQNP---SLVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAI 88 (195)
T ss_dssp HHHHHHHHHHTTCCCEEEECH-H----H-HHHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecC-h----h-hhhCH---HHHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHH
Confidence 467888888874 45677553 2 2 23345 6789999999 78888899777777778999999999999999
Q ss_pred HHHhCCCCceeeecCCCCC-chhHHHHHHhhcCCcEE
Q 015028 155 KDSFGKLPRVGWQIDPFGH-SAVQAYLLGAELGFDSL 190 (414)
Q Consensus 155 ~~~fG~~~~~~w~pD~FGh-s~~lPqil~~~~Gi~~~ 190 (414)
++..|..|+ +.-=|+|. +..+.+++ +++|+..+
T Consensus 89 ~~~~G~~~~--~fr~P~G~~~~~~~~~~-~~~G~~~v 122 (195)
T 2cc0_A 89 AGAGGGTPK--LFRPPYGETNATLRSVE-AKYGLTEV 122 (195)
T ss_dssp HHTTSCCCS--EECCGGGCCCHHHHHHH-HHTTCEEC
T ss_pred HHHhCCCCC--EEECCCCCcCHHHHHHH-HHCCCeEE
Confidence 998898775 33346665 45677888 88888653
No 14
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=93.17 E-value=0.73 Score=44.60 Aligned_cols=109 Identities=17% Similarity=0.095 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHH
Q 015028 74 NVLDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHW 152 (414)
Q Consensus 74 ~~l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~ 152 (414)
.-+..++++|+++. ..+|+... ..+ +.+| +.+|+++++|- ||.+=+|.=.+....+.|.+.++|..+.+
T Consensus 74 ~~~~rlL~lL~~~~v~aTfFv~g-~~~-----~~~p---~~v~~i~~~Gh-EIg~H~~~H~~~~~~s~~~~~~ei~~~~~ 143 (326)
T 3qbu_A 74 VGIPRLLKLFKKYHLPATWFVPG-HSI-----ETFP---EQMKMIVDAGH-EVGAHGYSHENPIAMSTKQEEDVLLKSVE 143 (326)
T ss_dssp THHHHHHHHHHHTTCCCEEECCH-HHH-----HHCH---HHHHHHHTTTC-EEEBCCSSCCCGGGSCHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHcCCCEEEEEEh-HHh-----hhCH---HHHHHHHHcCC-EEEeCCCCCcChhhCCHHHHHHHHHHHHH
Confidence 45678999999884 35677543 222 2345 67889999997 89888886666667789999999999999
Q ss_pred HHHHHhCCCCceeeecCCCCCchhHHHHHHhhcCCcEEEEee
Q 015028 153 FIKDSFGKLPRVGWQIDPFGHSAVQAYLLGAELGFDSLYFAR 194 (414)
Q Consensus 153 ~l~~~fG~~~~~~w~pD~FGhs~~lPqil~~~~Gi~~~v~~R 194 (414)
.+++.+|..|+. |-+=-...+..+.+++ +++|+.+..-.+
T Consensus 144 ~l~~~~G~~p~~-fr~P~g~~~~~~~~~l-~e~G~~ydss~~ 183 (326)
T 3qbu_A 144 LIKDLTGKAPTG-YVAPWWEFSNITNELL-LKHGFKYDHSLM 183 (326)
T ss_dssp HHHHHHSSCCCE-ECCGGGCCSSHHHHHH-HTTTCCEECCCC
T ss_pred HHHHHHCCCCcE-EECCCCCCCHHHHHHH-HHcCCEEEeecc
Confidence 999989988753 4432234567889999 999999855444
No 15
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=93.14 E-value=0.47 Score=43.65 Aligned_cols=102 Identities=14% Similarity=0.140 Sum_probs=76.0
Q ss_pred HHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHH
Q 015028 76 LDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFI 154 (414)
Q Consensus 76 l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l 154 (414)
...+++.|+++. ..+|+... ..+ +.+| +.+|+++++| .|+-+=+|.-++....+.+.+.+++....+.+
T Consensus 47 ~~~il~iL~~~~v~ATfFv~g-~~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 116 (230)
T 2y8u_A 47 TPQLLDLLSRYSARATFFVLG-DAA-----AQNP---GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVI 116 (230)
T ss_dssp HHHHHHHHHHTTCCCEEEECH-HHH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEec-HHH-----hHCH---HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 356778887774 45677653 222 2345 7899999999 67888889877777778999999999999999
Q ss_pred HHHhCCCCceeeecCCCC-CchhHHHHHHhhcCCcEE
Q 015028 155 KDSFGKLPRVGWQIDPFG-HSAVQAYLLGAELGFDSL 190 (414)
Q Consensus 155 ~~~fG~~~~~~w~pD~FG-hs~~lPqil~~~~Gi~~~ 190 (414)
++..|..++ +.-=|+| .+..+-+++ ++.|+..+
T Consensus 117 ~~~~G~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~~ 150 (230)
T 2y8u_A 117 RPALGVAPA--YMRPPYLETNELVLQVM-RDLDYRVI 150 (230)
T ss_dssp HHHHSSCBS--EECCGGGCCCHHHHHHH-HHTTCEEE
T ss_pred HHHhCCCCc--EEECCCCCCCHHHHHHH-HHcCCEEE
Confidence 999998764 3344566 456778888 89998653
No 16
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=91.22 E-value=0.72 Score=42.87 Aligned_cols=102 Identities=19% Similarity=0.145 Sum_probs=74.2
Q ss_pred HHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHH
Q 015028 77 DSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIK 155 (414)
Q Consensus 77 ~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~ 155 (414)
..+++.|+++. ..+|+... . | .+.+| +.+|+++++| .||-+=+|.-++....+.+.+.+++..+.+.++
T Consensus 71 ~~il~iL~~~~v~ATfFv~g-~----~-~~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 140 (247)
T 2j13_A 71 GKILDVLKEKKVPATFFVTG-H----Y-IKTQK---DLLLRMKDEG-HIIGNHSWSHPDFTAVNDEKLREELTSVTEEIK 140 (247)
T ss_dssp HHHHHHHHHHTCCEEEEECH-H----H-HHHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeC-h----h-hhhCH---HHHHHHHHCC-CEEEecCCCCcChhhCCHHHHHHHHHHHHHHHH
Confidence 35677777663 34666543 2 2 23345 6789999999 678888998777777789999999999999999
Q ss_pred HHhCCCCceeeecCCCCC-chhHHHHHHhhcCCcEE
Q 015028 156 DSFGKLPRVGWQIDPFGH-SAVQAYLLGAELGFDSL 190 (414)
Q Consensus 156 ~~fG~~~~~~w~pD~FGh-s~~lPqil~~~~Gi~~~ 190 (414)
+.+|..+.. +.-=|+|. +..+.+++ +++|+..+
T Consensus 141 ~~~G~~~~~-~fr~P~G~~~~~~~~~l-~~~G~~~v 174 (247)
T 2j13_A 141 KVTGQKEVK-YVRPPRGVFSERTLALT-KEMGYYNV 174 (247)
T ss_dssp HHHCCSCCC-EECCGGGEECHHHHHHH-HHTTCEEE
T ss_pred HHhCCCCCc-EEeCCCCCCCHHHHHHH-HHCCCEEE
Confidence 999987222 23335553 56778888 89999864
No 17
>3vus_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; deacetyl hydrolase; 1.65A {Escherichia coli}
Probab=90.74 E-value=1.2 Score=41.80 Aligned_cols=114 Identities=14% Similarity=0.170 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChH----------------HHHHHHHHHHCCCeEEecceeeecccC
Q 015028 74 NVLDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKA----------------MKVKVKGLVDSGQLEFINGGMCMHDEA 136 (414)
Q Consensus 74 ~~l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe----------------~~~~vk~lV~~GRlE~vgG~Wvq~De~ 136 (414)
..+..++..|+++- ..+|+... . |.. ..|+ ..++||+++++|-.||-+=+|..+...
T Consensus 78 ~~~~~~~~~l~~~~~~atfFv~~-~----~v~-~~~~~~~~~g~~~~~~~~~lt~~~lr~m~~~G~~eIgsHT~~hH~~~ 151 (268)
T 3vus_A 78 SFYTRVFPILQAFQWPAVWAPVG-S----WVD-TPADKQVKFGDELVDREYFATWQQVREVARSRLVELASHTWNSHYGI 151 (268)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECH-H----HHT-SCSSSCEEETTEEECGGGBCCHHHHHHHHHTTSEEECBCCSSCCSBC
T ss_pred hHHHHHHHHHHHcCCCEEEEEec-c----ccC-CccccccccccccccccccCCHHHHHHHHHCCCeEEecCcccccccc
Confidence 34556788888774 23555442 2 322 1111 348899999999999877777644321
Q ss_pred C-----------------------CC----hHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCC-chhHHHHHHhhcCCc
Q 015028 137 S-----------------------PH----YIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGH-SAVQAYLLGAELGFD 188 (414)
Q Consensus 137 l-----------------------~~----gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGh-s~~lPqil~~~~Gi~ 188 (414)
. .+ .+.+.+.+....+.+++.+|..|+. ..=|||. +..+-+++ +++|++
T Consensus 152 ~~~~~G~~~p~~~~~~y~~~~~~~es~~~~~~~i~~ei~~s~~~l~~~~G~~~~~--fr~PyG~~n~~~~~~~-~~~Gy~ 228 (268)
T 3vus_A 152 QANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPHV--FVWPYGEANGIAIEEL-KKLGYD 228 (268)
T ss_dssp CCC-----CBTTSSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHSCCCCCE--EECGGGCCCHHHHHHH-HHTTCC
T ss_pred ccccccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHhCCCCCE--EEeCCCcCCHHHHHHH-HHCCCc
Confidence 1 12 3457788889999999999998763 2337886 55677888 999999
Q ss_pred EEEEeecc
Q 015028 189 SLYFARID 196 (414)
Q Consensus 189 ~~v~~R~~ 196 (414)
..+..+..
T Consensus 229 ~a~t~~~g 236 (268)
T 3vus_A 229 MFFTLESG 236 (268)
T ss_dssp EEECCCSS
T ss_pred EEEEecCC
Confidence 98877654
No 18
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=89.20 E-value=1.4 Score=40.53 Aligned_cols=100 Identities=17% Similarity=0.162 Sum_probs=74.0
Q ss_pred HHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHHH
Q 015028 78 SVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIKD 156 (414)
Q Consensus 78 ~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~~ 156 (414)
.+++.|+++. ..+|+... ..+ +.+| +.+|+++++| .||-+=+|.-++....+.+.+.+++..+.+.+++
T Consensus 60 ~il~iL~~~~v~ATfFv~g-~~~-----~~~p---~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~ 129 (240)
T 1ny1_A 60 KVLDVLKKHRVTGTFFVTG-HFV-----KDQP---QLIKRMSDEG-HIIGNHSFHHPDLTTKTADQIQDELDSVNEEVYK 129 (240)
T ss_dssp HHHHHHHHTTCCCEEEECH-HHH-----HHCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeC-hhh-----hhCH---HHHHHHHHCc-CChhcCCccccccccCCHHHHHHHHHHHHHHHHH
Confidence 5778887774 35676553 222 3345 6789999999 7888889977777677899999999999999999
Q ss_pred HhCCC-CceeeecCCCCC-chhHHHHHHhhcCCcEE
Q 015028 157 SFGKL-PRVGWQIDPFGH-SAVQAYLLGAELGFDSL 190 (414)
Q Consensus 157 ~fG~~-~~~~w~pD~FGh-s~~lPqil~~~~Gi~~~ 190 (414)
..|.. ++ +.-=|+|. +..+.+++ +++|+..+
T Consensus 130 ~~G~~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 162 (240)
T 1ny1_A 130 ITGKQDNL--YLRPPRGVFSEYVLKET-KRLGYQTV 162 (240)
T ss_dssp HHSCCCCC--EECCGGGEECHHHHHHH-HHTTCEEB
T ss_pred HhCCCCCc--EEeCCCCCCCHHHHHHH-HHcCCEEE
Confidence 99986 43 23345563 56778888 89998754
No 19
>2c71_A Glycoside hydrolase, family 11\:clostridium cellulosome enzyme, dockerin type I\:polysaccharide...; acetyl-xylan, esterases, metal-ION; 1.05A {Clostridium thermocellum} SCOP: c.6.2.3 PDB: 2c79_A
Probab=85.72 E-value=1.5 Score=39.76 Aligned_cols=88 Identities=18% Similarity=0.161 Sum_probs=65.0
Q ss_pred HHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHH
Q 015028 77 DSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIK 155 (414)
Q Consensus 77 ~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~ 155 (414)
..+++.|+++. ..+|+... ..+++ +|+ +.+|+++++| .||-+=+|.-++....+.+.+.+++..+.+.++
T Consensus 21 ~~il~iL~~~~v~ATfFv~g-~~~~~-----~p~--~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~ 91 (216)
T 2c71_A 21 ARVLDKLDKYNVKATFMVVG-QRVND-----STA--AIIRRMVNSG-HEIGNHSWSYSGMANMSPDQIRKSIADTNAVIQ 91 (216)
T ss_dssp HHHHHHHHHHTCCCEEEECG-GGCSH-----HHH--HHHHHHHHTT-CEEEECCSSSSCCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEC-hhhhh-----CHH--HHHHHHHHCC-CEEeeCCcCCcchhhCCHHHHHHHHHHHHHHHH
Confidence 46788888774 45676554 22222 242 4899999999 789888998777777789999999999999999
Q ss_pred HHhCCCCceeeecCCCCCch
Q 015028 156 DSFGKLPRVGWQIDPFGHSA 175 (414)
Q Consensus 156 ~~fG~~~~~~w~pD~FGhs~ 175 (414)
+..|..|+ +.-=|+|...
T Consensus 92 ~~~G~~~~--~fr~P~G~~~ 109 (216)
T 2c71_A 92 KYAGTTPK--FFRPPNLETS 109 (216)
T ss_dssp HHHSCCCS--EECCGGGCCC
T ss_pred HhhCCCCe--EEECCCCCCC
Confidence 99998765 3345777544
No 20
>2vyo_A ECU11_0510, chitooligosaccharide deacetylase; CE4 esterase, native protein, microsporidian, chitin deacetylase, hydrolase, inactive; 1.50A {Encephalitozoon cuniculi}
Probab=84.21 E-value=2.8 Score=38.90 Aligned_cols=101 Identities=15% Similarity=0.025 Sum_probs=73.6
Q ss_pred HHHHHHHHcCC-CCcE-EeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeee--cccCCCChHHHHHHHHHHHH
Q 015028 77 DSVISALFEDK-NRKF-IYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCM--HDEASPHYIDMIDQTTLGHW 152 (414)
Q Consensus 77 ~~vl~~L~~~p-~~kF-~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq--~De~l~~gEslIrql~~G~~ 152 (414)
..+++.|+++. ..+| +... . | .+.+|+ +.+|+++++| .|+-+=+|.- ++-...+.+.+.+++....+
T Consensus 42 ~~il~iL~~~~v~ATF~Fv~g-~----~-~~~~p~--~~~~~i~~~G-heIg~Ht~~H~~~~l~~ls~~~~~~ei~~~~~ 112 (254)
T 2vyo_A 42 DRILNTLDELGVKATFSFTVN-Q----K-AVGNVG--QLYRRAVEEG-HNVALRVDPSMDEGYQCLSQDALENNVDREID 112 (254)
T ss_dssp HHHHHHHHHHTCCCEEEECCS-S----C-CCGGGT--HHHHHHHHTT-CEEEEECCGGGTTCGGGSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEccC-h----H-HhHCHH--HHHHHHHhCC-CEEEecCCCCCCcCcccCCHHHHHHHHHHHHH
Confidence 45677777663 4567 6543 1 2 234453 3889999999 6788888877 67666789999999999999
Q ss_pred HHHHHhCCCCceeeecCCC--C-CchhHHHHHHhhcCCcE
Q 015028 153 FIKDSFGKLPRVGWQIDPF--G-HSAVQAYLLGAELGFDS 189 (414)
Q Consensus 153 ~l~~~fG~~~~~~w~pD~F--G-hs~~lPqil~~~~Gi~~ 189 (414)
.+++..|..|+. .-=|+ | ++..+.+++ ++.|+..
T Consensus 113 ~l~~~~G~~~~~--fr~P~~~G~~~~~~~~~l-~~~G~~~ 149 (254)
T 2vyo_A 113 TIDGLSGTEIRY--AAVPICNGQVNSEMYNIL-TERGVLP 149 (254)
T ss_dssp HHHHHHTSCCCE--EECCCBTTEECHHHHHHH-HTTTCEE
T ss_pred HHHHHHCCCCeE--EeCCccCCCCCHHHHHHH-HHCCCEE
Confidence 999999987653 33455 5 356688888 8889875
No 21
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=84.19 E-value=1.6 Score=40.50 Aligned_cols=107 Identities=13% Similarity=0.072 Sum_probs=75.2
Q ss_pred HHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHH
Q 015028 76 LDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFI 154 (414)
Q Consensus 76 l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l 154 (414)
...+++.|+++. ..+|+... ..+. . .+ .....+.+|+++++| .||-+=+|.-++....+.+.+.+++..+.+.+
T Consensus 56 ~~~il~iL~~~~vkATFFv~g-~~~g-~-~~-~~~~p~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l 130 (254)
T 2iw0_A 56 TPQLLDILKQNDVRATFFVNG-NNWA-N-IE-AGSNPDTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEAT 130 (254)
T ss_dssp HHHHHHHHHHHTCCCEEEECS-BSSS-B-TT-STTHHHHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEC-Cccc-c-cc-cccCHHHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHH
Confidence 456777787774 35666544 1100 0 01 012237899999999 78988899877777778999999999999999
Q ss_pred HHHhCCCCceeeecCCCC-CchhHHHHHHhhcCCcEE
Q 015028 155 KDSFGKLPRVGWQIDPFG-HSAVQAYLLGAELGFDSL 190 (414)
Q Consensus 155 ~~~fG~~~~~~w~pD~FG-hs~~lPqil~~~~Gi~~~ 190 (414)
++..|..|+ +.-=|+| ++..+-+++ +++|+..+
T Consensus 131 ~~~~G~~~~--~fr~P~G~~~~~~~~~l-~~~G~~~v 164 (254)
T 2iw0_A 131 RRIDGFAPK--YMRAPYLSCDAGCQGDL-GGLGYHII 164 (254)
T ss_dssp HHHHSCEES--EECCGGGCCCHHHHHHH-HHTTCEEE
T ss_pred HHHhCCCCC--EEECCCCCCCHHHHHHH-HHcCCeEE
Confidence 999998654 3344565 456688888 89998753
No 22
>4f9d_A Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylas; family 4 carbohydrate esterase, TIM barrel, hydrolase, deace carbohydrate/sugar binding; HET: MES; 1.90A {Escherichia coli} PDB: 4f9j_A*
Probab=83.45 E-value=1.8 Score=45.69 Aligned_cols=115 Identities=14% Similarity=0.165 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChH----------------HHHHHHHHHHCCCeEEecceeeecccC
Q 015028 74 NVLDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKA----------------MKVKVKGLVDSGQLEFINGGMCMHDEA 136 (414)
Q Consensus 74 ~~l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe----------------~~~~vk~lV~~GRlE~vgG~Wvq~De~ 136 (414)
..++.++..|+++- ..+|+... . |+. ..|. ..++||++.++|-+||-+=+|..|-..
T Consensus 82 d~y~~AlPILkkygvpATfFVig-~----~i~-~~~~~~~~~~~~~~~~~~~lsw~qlrem~~sG~~EIGsHT~shH~~l 155 (618)
T 4f9d_A 82 SFYTRVFPILQAFQWPAVWAPVG-S----WVD-TPADKQVKFGDELVDREYFATWQQVREVARSRLVELASHTWNSHYGI 155 (618)
T ss_dssp HHHHTHHHHHHHHTCCEEEEECH-H----HHT-SCTTSCEEETTEEECGGGBCCHHHHHHHHHHTSEEECBCCSSCCSEE
T ss_pred ccHHHHHHHHHHcCCCEEEEEec-c----ccc-CCcccccccccccccccccCCHHHHHHHHHCCCcEEeeccccccccc
Confidence 45667888898873 23454432 3 322 2211 248999999999998877777633211
Q ss_pred ------------C-----------CC----hHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCC-chhHHHHHHhhcCCc
Q 015028 137 ------------S-----------PH----YIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGH-SAVQAYLLGAELGFD 188 (414)
Q Consensus 137 ------------l-----------~~----gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGh-s~~lPqil~~~~Gi~ 188 (414)
+ .+ -+.+.+.|...++.|++.+|..++. ..=|||. +..+-.++ +++|++
T Consensus 156 ~~~p~G~~~Pa~l~r~~~~~~~~~es~~e~~~~i~~EL~~Sk~~Le~~lG~~~~~--FayPyG~~n~~~~~~a-ke~Gy~ 232 (618)
T 4f9d_A 156 QANATGSLLPVYVNRAYFTDHARYETAAEYRERIRLDAVKMTEYLRTKVEVNPHV--FVWPYGEANGIAIEEL-KKLGYD 232 (618)
T ss_dssp ECSTTCCEEEGGGSCCEETTTTEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE--EECGGGCCCHHHHHHH-HHTTCC
T ss_pred ccccccccccchhcccccccccccCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCE--EEcCCCCCCHHHHHHH-HHcCCE
Confidence 0 01 2678999999999999999998763 2338885 67788888 999999
Q ss_pred EEEEeecch
Q 015028 189 SLYFARIDY 197 (414)
Q Consensus 189 ~~v~~R~~~ 197 (414)
..+..+...
T Consensus 233 ~afTt~~G~ 241 (618)
T 4f9d_A 233 MFFTLESGL 241 (618)
T ss_dssp EEECCCSSC
T ss_pred EEEEecCCC
Confidence 998877553
No 23
>2og0_A Excisionase; protein-DNA complex, DNA architectural protein, 'winged'HELI protein, phage excision; 1.90A {Enterobacteria phage lambda} SCOP: a.6.1.7 PDB: 1lx8_A 1rh6_A 2ief_A
Probab=78.82 E-value=2.2 Score=29.98 Aligned_cols=36 Identities=11% Similarity=0.143 Sum_probs=29.0
Q ss_pred HHHHHHhcC--hHHHHHHHHHHHCCCe----EEeccee-eeccc
Q 015028 99 FQRWWRQQS--KAMKVKVKGLVDSGQL----EFINGGM-CMHDE 135 (414)
Q Consensus 99 l~~w~~e~~--pe~~~~vk~lV~~GRl----E~vgG~W-vq~De 135 (414)
+++| .+.. |--...|++++++|+| .-||+-| +..|.
T Consensus 5 l~Ew-A~~~~~~~s~~Tl~r~ar~G~I~Pp~~KvGr~wrv~~~a 47 (52)
T 2og0_A 5 LQEW-NARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESA 47 (52)
T ss_dssp HHHH-HHTSSSCCCHHHHHHHHHTTCEESCCEEETTEEEEETTC
T ss_pred HHHH-HHHhcCCCCHHHHHHHHHCCCCCCcccccCCEEEEcccc
Confidence 5677 5554 6678999999999999 8899999 77664
No 24
>2w3z_A Putative deacetylase; PGDA, glcnac DE-N-acetylase, hydrolase, divale metal cation dependent, carbohydrate esterase family 4; 1.45A {Streptococcus mutans UA159}
Probab=74.87 E-value=10 Score=36.35 Aligned_cols=105 Identities=15% Similarity=0.143 Sum_probs=71.6
Q ss_pred HHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccC-----CCChHHHHHHHHH
Q 015028 76 LDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEA-----SPHYIDMIDQTTL 149 (414)
Q Consensus 76 l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~-----l~~gEslIrql~~ 149 (414)
...+++.|+++. ..+|+... . +.+..+| +.+|+++++| .|+-+=+|.-++.. ..+.+.+.+++..
T Consensus 122 t~~iLdiL~~~~vkATFFv~G-~----~i~~~~p---~~vr~i~~~G-heIgnHt~sH~~~~~~~~~~ls~~~~~~Ei~~ 192 (311)
T 2w3z_A 122 TPKILDVLAQQHVHATFFLVG-C----NITDKVK---PILQRQITEG-HALGIHSFSHVYSLLYPNRVGNTQQIVSEVTR 192 (311)
T ss_dssp HHHHHHHHHHTTCCCEEEECG-G----GCCGGGH---HHHHHHHHTT-CEEEECCSSCCHHHHSGGGBCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEEeC-h----hhcccCH---HHHHHHHHCC-CeeeccCCccccccccccCCCCHHHHHHHHHH
Confidence 567899998874 35677654 1 2111134 6799999999 67877888554432 2478999999999
Q ss_pred HHHHHHHHhCCCCceeeecCCCCCchh-----HHHHHHhhcCCcEE
Q 015028 150 GHWFIKDSFGKLPRVGWQIDPFGHSAV-----QAYLLGAELGFDSL 190 (414)
Q Consensus 150 G~~~l~~~fG~~~~~~w~pD~FGhs~~-----lPqil~~~~Gi~~~ 190 (414)
+.+.+++..|...+.-+.-=|+|.... +.+++ ++.|+..+
T Consensus 193 ~~~~L~~~~G~~~~p~~fR~PyG~~~~~~~~~~~~~l-~~~G~~~v 237 (311)
T 2w3z_A 193 TQNALKDQLGQNFKTGVWRYPGGHLSWTGLEAADKQL-AAQGIQWM 237 (311)
T ss_dssp HHHHHHHHHCTTBCCCEECCTTCGGGCBCCHHHHHHH-HTTTCEEC
T ss_pred HHHHHHHHhCCCCCCcEEECCCCCcChhHHHHHHHHH-HHCCCEEE
Confidence 999999999932222344557776542 45788 89998763
No 25
>2c1i_A Peptidoglycan glcnac deacetylase; carbohydrate esterase, peptidoglycan deacetylase, metalloenzyme, D275N mutant, hydrolase; HET: MES; 1.35A {Streptococcus pneumoniae} SCOP: c.6.2.3 d.341.1.1 PDB: 2c1g_A
Probab=74.40 E-value=14 Score=37.19 Aligned_cols=97 Identities=13% Similarity=0.082 Sum_probs=72.3
Q ss_pred HHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHH
Q 015028 77 DSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIK 155 (414)
Q Consensus 77 ~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~ 155 (414)
..++++|+++. ..+|+... . | .+.+| +.+|+++++| .||-+=+|.-++....+.+.+.+++..+.+.++
T Consensus 252 ~~il~iL~k~~vkATFFvig-~----~-i~~~p---~~lr~m~~~G-heIgnHT~sH~~l~~ls~~~~~~EI~~s~~~L~ 321 (431)
T 2c1i_A 252 PQVLETLAKYDIKATFFVLG-K----N-VSGNE---DLVKRIKSEG-HVVGNHSWSHPILSQLSLDEAKKQITDTEDVLT 321 (431)
T ss_dssp HHHHHHHHHTTCCCEEEECG-G----G-TTTCH---HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEEEEC-c----c-ccCCH---HHHHHHHHCC-CEEeecCCCCcccccCCHHHHHHHHHHHHHHHH
Confidence 47889998884 34666543 2 2 23455 6789999999 788888897777666788999999999999999
Q ss_pred HHhCCCCceeeecCCCCCchhHHHHHHhhcCCc
Q 015028 156 DSFGKLPRVGWQIDPFGHSAVQAYLLGAELGFD 188 (414)
Q Consensus 156 ~~fG~~~~~~w~pD~FGhs~~lPqil~~~~Gi~ 188 (414)
+..|..|+ +..=|+|... +.++ +.+|+.
T Consensus 322 ~~~G~~~~--~fr~PyG~~n--~~v~-~~~G~~ 349 (431)
T 2c1i_A 322 KVLGSSSK--LMRPPYGAIT--DDIR-NSLDLS 349 (431)
T ss_dssp HHHSCCCC--EECCGGGCCC--HHHH-HTSSCE
T ss_pred HhhCCCCe--EEECCCCCCC--HHHH-HHCCCe
Confidence 99997664 3344788765 5677 777764
No 26
>1pm6_A Excisionase; antiparallel beta-sheet, winged-helix, CIS-trans-trans triproline, gene regulation; NMR {Enterobacteria phage HK022} SCOP: a.6.1.7
Probab=64.56 E-value=4.4 Score=30.42 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=30.1
Q ss_pred HHHHHHhcC--hHHHHHHHHHHHCCCe----EEeccee-eecccCCC
Q 015028 99 FQRWWRQQS--KAMKVKVKGLVDSGQL----EFINGGM-CMHDEASP 138 (414)
Q Consensus 99 l~~w~~e~~--pe~~~~vk~lV~~GRl----E~vgG~W-vq~De~l~ 138 (414)
+++| .+.. |--...|++++++|+| .-||+-| +..|.-.+
T Consensus 5 l~Ew-A~~~~~~~s~~Tl~r~ar~G~I~Pp~~KvGr~Wrv~~~a~~v 50 (72)
T 1pm6_A 5 LQEW-NARQRRPRSLETVRRWVRESRIFPPPVKDGREYLFHESAVKV 50 (72)
T ss_dssp HHHH-HHHSSSCCCHHHHHHHHHHTCEESCCEECSSSEEEETTCEES
T ss_pred HHHH-HHHhcCCCCHHHHHHHHHCCCCCCchhhcCCEEEECchheee
Confidence 5677 5544 5677899999999999 8899999 77665444
No 27
>1u69_A Hypothetical protein; structural genomics, MSCG, pseudomonas aeruginosa PAO1, HYPO protein, protein structure initiative (PSI); 1.60A {Pseudomonas aeruginosa} SCOP: d.32.1.7
Probab=57.77 E-value=3.5 Score=35.88 Aligned_cols=14 Identities=36% Similarity=0.586 Sum_probs=13.1
Q ss_pred ceeeecCCCCCchh
Q 015028 163 RVGWQIDPFGHSAV 176 (414)
Q Consensus 163 ~~~w~pD~FGhs~~ 176 (414)
+.||+.|+||++|+
T Consensus 106 ~~G~v~D~fGv~W~ 119 (163)
T 1u69_A 106 ACGWCRDKWGISWQ 119 (163)
T ss_dssp STTEEECTTSCEEE
T ss_pred EEEEEECCCCCEEE
Confidence 67899999999998
No 28
>1ldd_A APC2WHB, anaphase promoting complex; ubiquitin, ligase, ubiquitination, ring finger, winged-helix; 2.00A {Saccharomyces cerevisiae} SCOP: a.4.5.34
Probab=50.99 E-value=10 Score=28.62 Aligned_cols=23 Identities=26% Similarity=0.560 Sum_probs=18.8
Q ss_pred hHHHHHHHHHHHCCCeEE-eccee
Q 015028 108 KAMKVKVKGLVDSGQLEF-INGGM 130 (414)
Q Consensus 108 pe~~~~vk~lV~~GRlE~-vgG~W 130 (414)
++.++-+.++|++|+||+ .||-|
T Consensus 48 ~eL~~fL~~~v~e~kL~~~~gG~Y 71 (74)
T 1ldd_A 48 QQLEGYLNTLADEGRLKYIANGSY 71 (74)
T ss_dssp HHHHHHHHHHHHTTSEECCTTTEE
T ss_pred HHHHHHHHHHHhCCeEEEeCCCEE
Confidence 456677889999999996 48887
No 29
>4hd5_A Polysaccharide deacetylase; TIM barrel, hydrolase; 1.90A {Bacillus cereus}
Probab=47.85 E-value=62 Score=31.65 Aligned_cols=80 Identities=14% Similarity=0.053 Sum_probs=56.7
Q ss_pred HHHHHHHHHCCCeEEecceeeecccCCCChHHHHHHHHHHHHHHHHHhCCCCceeeecCCCCC-chhHHHHHHhhcCCcE
Q 015028 111 KVKVKGLVDSGQLEFINGGMCMHDEASPHYIDMIDQTTLGHWFIKDSFGKLPRVGWQIDPFGH-SAVQAYLLGAELGFDS 189 (414)
Q Consensus 111 ~~~vk~lV~~GRlE~vgG~Wvq~De~l~~gEslIrql~~G~~~l~~~fG~~~~~~w~pD~FGh-s~~lPqil~~~~Gi~~ 189 (414)
.++||++.++|-+||-+=+|.-++..-. ..+-++|...++.|++.+|..++. ..=|||. +...-.++ + .|++.
T Consensus 247 w~qIrem~~~G~~eIGsHT~sH~~L~~l--s~~e~EI~~Sk~~Le~~lG~~v~~--FAYPyG~yn~~v~~~a-k-~gy~~ 320 (360)
T 4hd5_A 247 TSEIKEMVDSGIFSVQSHTATHADLPKI--TNYEEELKGSKEKLEKITGKPVIA--IAYXFGHVDDKVVTET-K-KYYQF 320 (360)
T ss_dssp HHHHHHHHHTTSEEEEECCSSCCCGGGC--SCHHHHHHHHHHHHHHHHSSCCCE--EECGGGCCCHHHHHHH-T-TTCSE
T ss_pred HHHHHHHHHcCCceeeccCCcccccccC--CHHHHHHHHHHHHHHHHhCCCCcE--EEcCCCCCCHHHHHHH-H-hCCcE
Confidence 5789999999999987677755553222 233478889999999999998753 3348885 44555665 4 58888
Q ss_pred EEEeecc
Q 015028 190 LYFARID 196 (414)
Q Consensus 190 ~v~~R~~ 196 (414)
.+..+..
T Consensus 321 AfTt~~G 327 (360)
T 4hd5_A 321 ATTTKPG 327 (360)
T ss_dssp EEEEEES
T ss_pred EEEeccc
Confidence 8876643
No 30
>4esj_A Type-2 restriction enzyme DPNI; restriction endonuclease-DNA complex, type IIM, type IIE, RE enzyme, DPNI; HET: DNA 6MA; 2.05A {Streptococcus pneumoniae}
Probab=46.04 E-value=21 Score=32.94 Aligned_cols=98 Identities=16% Similarity=0.181 Sum_probs=62.5
Q ss_pred eeecCCCCCCCCceEEEEeecccC-Cc-----cccchHhHHhccccccchhHHHHHHHHHHHHHHHcCCCCcEEeechHH
Q 015028 25 IAYNTTAGIVPDKINVHLVPHSHD-DV-----GWLKTVDQYYVGANNSIRGACVQNVLDSVISALFEDKNRKFIYVEMAF 98 (414)
Q Consensus 25 ~~~~~~~~~~~~~~~ihvV~HSH~-D~-----~Wl~t~~ey~~~~~~~~~~~~v~~~l~~vl~~L~~~p~~kF~~~e~~~ 98 (414)
||=|-.=...|+..+|++|-..-. |+ .|..|.- .++. ....+--+-.++.-+++=|+..|++.|+.-
T Consensus 142 iGCnI~l~~iP~sGkIflVk~~~~~~~~~V~~~~q~tlf--Lr~~-----~~~~rgWlldi~~cid~i~~~eFtL~diY~ 214 (257)
T 4esj_A 142 IGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLF--LRKS-----SLSSRGWTIEILNCIDKIEGSEFTLEDMYR 214 (257)
T ss_dssp EEEEEEGGGSCGGGCEEEEETTEECCHHHHHHHHHHTGG--GGGS-----CHHHHHHHHHHHHHHHHSCSSEEEHHHHHT
T ss_pred cceeeehhhCCCCceEEEEeCCeeCCHHHHHHHHHHHHH--HHhc-----CcccccHHHHHHHHHHhcCcceeeHHHHHH
Confidence 333333345577888888765533 11 2333321 0000 012233455677778888999999999888
Q ss_pred HHHHHHhcChH-------HHHHHHHHHHCCCeEEecce
Q 015028 99 FQRWWRQQSKA-------MKVKVKGLVDSGQLEFINGG 129 (414)
Q Consensus 99 l~~w~~e~~pe-------~~~~vk~lV~~GRlE~vgG~ 129 (414)
|++.+...+|. .|.+++-|=+.|-|||+|-|
T Consensus 215 fe~~L~~~~P~N~~Ik~KIRQqLQ~LRD~g~IeFl~rG 252 (257)
T 4esj_A 215 FESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRG 252 (257)
T ss_dssp THHHHHHHSTTCSCHHHHHHHHHHHHHHTTSEEECSTT
T ss_pred HHHHHHHhCCCCCChhHHHHHHHHHHhhcCceEEecCC
Confidence 88888887775 46777778899999999654
No 31
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=40.41 E-value=43 Score=25.27 Aligned_cols=53 Identities=11% Similarity=0.020 Sum_probs=36.2
Q ss_pred HHHHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEec---cee
Q 015028 75 VLDSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFIN---GGM 130 (414)
Q Consensus 75 ~l~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vg---G~W 130 (414)
+-..+|++|.+++ .-+....|.+ +=+.-...+....|++|.++|.++.+| |.|
T Consensus 11 ~~~~IL~~L~~~~pg~~~t~~eLA---~~Lgvsr~tV~~~L~~Le~~G~I~~~g~~~~~W 67 (81)
T 1qbj_A 11 QEQRILKFLEELGEGKATTAHDLS---GKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLW 67 (81)
T ss_dssp HHHHHHHHHHHHCTTCCBCHHHHH---HHHTCCHHHHHHHHHHHHHTTSEEEESSSSCEE
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHH---HHHCcCHHHHHHHHHHHHHCCCEEecCCCCCee
Confidence 3456778888776 4455544533 222323468899999999999999886 567
No 32
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=37.10 E-value=39 Score=25.11 Aligned_cols=51 Identities=12% Similarity=0.049 Sum_probs=36.2
Q ss_pred HHHHHHHHcCC-CCcEEeechHHHHHHHHhcChHHHHHHHHHHHCCCeEEec---cee
Q 015028 77 DSVISALFEDK-NRKFIYVEMAFFQRWWRQQSKAMKVKVKGLVDSGQLEFIN---GGM 130 (414)
Q Consensus 77 ~~vl~~L~~~p-~~kF~~~e~~~l~~w~~e~~pe~~~~vk~lV~~GRlE~vg---G~W 130 (414)
..+|.+|.+++ .-+....|.+ +=+.-...+....|++|.++|.++-+| |.|
T Consensus 17 ~~IL~~L~~~~~~~~~t~~eLA---~~Lgvs~~tV~~~L~~L~~~G~I~~~g~~~~~W 71 (77)
T 1qgp_A 17 QRILKFLEELGEGKATTAHDLS---GKLGTPKKEINRVLYSLAKKGKLQKEAGTPPLW 71 (77)
T ss_dssp HHHHHHHHHHCSSSCEEHHHHH---HHHCCCHHHHHHHHHHHHHHTSEEEECSSSCEE
T ss_pred HHHHHHHHHcCCCCCcCHHHHH---HHHCcCHHHHHHHHHHHHHCCCEEecCCCCCce
Confidence 56788888887 4455655533 322333578889999999999999886 466
No 33
>1mwq_A Hypothetical protein HI0828; YCII_HAEIN, structural genomic structure 2 function project, S2F, unknown function; HET: MSE 1PE; 0.99A {Haemophilus influenzae} SCOP: d.58.4.7
Probab=32.87 E-value=42 Score=25.95 Aligned_cols=34 Identities=15% Similarity=0.159 Sum_probs=27.5
Q ss_pred HHHHHHhcChHHHHHHHHHHHCCCeEEecceeeecc
Q 015028 99 FQRWWRQQSKAMKVKVKGLVDSGQLEFINGGMCMHD 134 (414)
Q Consensus 99 l~~w~~e~~pe~~~~vk~lV~~GRlE~vgG~Wvq~D 134 (414)
+++. .+..|+..+-++++.++|++ +.+|+....|
T Consensus 17 ~e~~-~~~~~~H~~~l~~~~~~G~l-~~~Gp~~~~~ 50 (101)
T 1mwq_A 17 LEKR-LAVREQHLARLKQLQAENRL-LTAGPNPAID 50 (101)
T ss_dssp HHHH-HHTHHHHHHHHHHHHHTTCE-EEEEEEESSS
T ss_pred HHHH-HHHHHHHHHHHHHHHhCCEE-EEeecccCcc
Confidence 4554 67789999999999999999 7779987444
No 34
>1tsj_A Conserved hypothetical protein; structural genomics, protein structure initiative, PSI, nysgxrc; 2.60A {Staphylococcus aureus subsp} SCOP: d.32.1.7
Probab=31.35 E-value=11 Score=31.24 Aligned_cols=15 Identities=33% Similarity=0.541 Sum_probs=13.7
Q ss_pred ceeeecCCCCCchhH
Q 015028 163 RVGWQIDPFGHSAVQ 177 (414)
Q Consensus 163 ~~~w~pD~FGhs~~l 177 (414)
+.||+.|+||+++++
T Consensus 111 ~~g~v~Dp~G~~W~i 125 (139)
T 1tsj_A 111 EFAWVQDKFGVSFQL 125 (139)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred eEEEEECCCCCEEEE
Confidence 789999999999975
No 35
>3oms_A PHNB protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, methyltransferase, GL family; 1.90A {Bacillus cereus} SCOP: d.32.1.0
Probab=28.51 E-value=14 Score=30.81 Aligned_cols=15 Identities=33% Similarity=0.634 Sum_probs=13.5
Q ss_pred ceeeecCCCCCchhH
Q 015028 163 RVGWQIDPFGHSAVQ 177 (414)
Q Consensus 163 ~~~w~pD~FGhs~~l 177 (414)
+.||+.|+|||.+++
T Consensus 120 ~~~~~~Dp~G~~W~i 134 (138)
T 3oms_A 120 KFGWLNDKYGVSWQL 134 (138)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEE
Confidence 689999999999874
No 36
>1ucr_A Protein DSVD; dissimilatory sulfite reductase D, DNA binding motif, sulfate-reducing bacteria, winged-helix motif, unknown function; 1.20A {Desulfovibrio vulgaris} SCOP: a.4.5.45 PDB: 1wq2_A
Probab=27.56 E-value=33 Score=25.94 Aligned_cols=49 Identities=20% Similarity=0.404 Sum_probs=30.6
Q ss_pred HHHHHHHHcC--CCCcEEeechHHHHHHH-HhcChHHHHHHHHHHHCCCeEEecc
Q 015028 77 DSVISALFED--KNRKFIYVEMAFFQRWW-RQQSKAMKVKVKGLVDSGQLEFING 128 (414)
Q Consensus 77 ~~vl~~L~~~--p~~kF~~~e~~~l~~w~-~e~~pe~~~~vk~lV~~GRlE~vgG 128 (414)
..||+.|++- +.-+|.+-+ |.+-+ ....-+.+..+.+||.+|+||+..-
T Consensus 6 ~~Ile~l~~k~~~KskfYf~D---~~k~~P~~k~r~vKK~~~~LV~Eg~leywSS 57 (78)
T 1ucr_A 6 QKVVDFLNSKSGSKSKFYFND---FTDLFPDMKQREVKKILTALVNDEVLEYWSS 57 (78)
T ss_dssp HHHHHHHSSHHHHSSCEEHHH---HHHHCTTSCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HHHHHHHHhcccccccchHHH---HHHHccccCHHHHHHHHHHHHhcCceEEEec
Confidence 3566777665 556777444 22211 1223367788999999999998643
No 37
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=20.43 E-value=2e+02 Score=24.11 Aligned_cols=45 Identities=13% Similarity=0.164 Sum_probs=30.2
Q ss_pred cCCCceEEEeecCCCCCCchhHHHHHHHHHHHHhcC-CCceEEEcC
Q 015028 280 TRTNHIMWLMGTDFRYQYANSWFRQMDKFIHYVNKD-GRVNALYST 324 (414)
Q Consensus 280 ~~t~~iL~~~G~D~~~~~a~~~~~~l~~li~~~N~~-~~~~i~~sT 324 (414)
...+.|++..|........++..+++.++++.+.+. +..++.+.|
T Consensus 73 ~~pd~Vvi~~G~ND~~~~~~~~~~~l~~ii~~l~~~~p~~~ii~~~ 118 (200)
T 4h08_A 73 TKFDVIHFNNGLHGFDYTEEEYDKSFPKLIKIIRKYAPKAKLIWAN 118 (200)
T ss_dssp SCCSEEEECCCSSCTTSCHHHHHHHHHHHHHHHHHHCTTCEEEEEC
T ss_pred CCCCeEEEEeeeCCCCCCHHHHHHHHHHHHHHHhhhCCCccEEEec
Confidence 455677888886554455566678889999888764 456655443
Done!